BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 006437
         (645 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|225443409|ref|XP_002267486.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g16830 [Vitis vinifera]
 gi|297735747|emb|CBI18434.3| unnamed protein product [Vitis vinifera]
          Length = 659

 Score =  696 bits (1795), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/608 (55%), Positives = 457/608 (75%), Gaps = 11/608 (1%)

Query: 3   WRC--KRSLFYTAQRTQILKTIISFKSIHQISSPKVCATTHQDFP-----IILAPHIVHS 55
           WR   K    +   +T  L  + S  +  Q  +PK     H +FP     ++L   ++ S
Sbjct: 5   WRLFLKTPFHFFNPKTPSLTPLFSLSNHPQ--NPKFTRENH-NFPEKKPGLVLTDQLLES 61

Query: 56  TLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGC 115
           TLLNCPSDLIALSFF+WCAKQ ++FH  ++FDHM+ VV RLT +  T+RG++ EL  +GC
Sbjct: 62  TLLNCPSDLIALSFFLWCAKQPNFFHHRRAFDHMVDVVARLTQKSGTIRGVMDELGSIGC 121

Query: 116 VIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIK 175
           V+KAQTFLL LRI WRG++YG+V + ++EM  FG+ PN F  N+++DVLFKI R ++ +K
Sbjct: 122 VVKAQTFLLLLRICWRGKLYGLVFDVYEEMIAFGYVPNAFVCNVIIDVLFKIKRGEVALK 181

Query: 176 VLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGR 235
            LKET++ NFL+F+IALCNLC+LND+  V DV+ MM+RKG+ P+V +F ++LNCFCK+GR
Sbjct: 182 FLKETRVSNFLTFSIALCNLCRLNDLVGVGDVLRMMLRKGYCPSVEIFSMVLNCFCKVGR 241

Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
            AEA+Q+LGLM TLG  +SV  W++LIDG+RR+ ++  AG L EKMV+ GCSPNVVTYT+
Sbjct: 242 FAEAFQVLGLMATLGIPISVTVWSILIDGYRRIGKIGRAGNLLEKMVETGCSPNVVTYTT 301

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           LIKGFME+ M S A   L ++ ++G   DLV +NVLIDCLSK+G YDDAL ++  L + K
Sbjct: 302 LIKGFMESGMVSRALDVLRIMGTKGCDYDLVLYNVLIDCLSKVGRYDDALGIFFSLPKRK 361

Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKLV-CGLEVEADLVVYNALLSYFCKAGFPNQAVKL 414
           +VPDSYTF S+LS +CLS RFSLLPKL   GLEV  DLVV N+LLSYFCKAGFP+ AV+ 
Sbjct: 362 MVPDSYTFSSILSAICLSQRFSLLPKLFSSGLEVHTDLVVCNSLLSYFCKAGFPSLAVEF 421

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
           YN MLD+GF  D YSFVGLL GLCG+ ++DEA+NVY GI++N+  ++AH+HT I+  LI+
Sbjct: 422 YNDMLDRGFMIDQYSFVGLLSGLCGSGRVDEAVNVYSGILVNHSDLDAHIHTVIIGGLIK 481

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
           AG+ H+A++LF++A+VE+Y LD VSYTVAI GLL+GGRT EA ILY+QMK   + PNA+T
Sbjct: 482 AGKFHRAVRLFKKAMVERYTLDAVSYTVAIYGLLKGGRTGEACILYNQMKEAGLAPNAHT 541

Query: 535 YRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMC 594
           Y ++L  FCKER++KMVK+++Q++I A +EL+  T IR+T F+FK   S S  N L+EM 
Sbjct: 542 YNIILSCFCKERDMKMVKQMIQEMIAAGVELECDTLIRITNFLFKSKFSHSVFNLLIEMW 601

Query: 595 NLGLIPDE 602
             GL+P++
Sbjct: 602 GAGLMPNK 609


>gi|449435890|ref|XP_004135727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g16830-like [Cucumis sativus]
          Length = 665

 Score =  624 bits (1610), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 317/615 (51%), Positives = 429/615 (69%), Gaps = 17/615 (2%)

Query: 1   MLWRCKRSLFYTAQRTQILKTIISFKSIHQISSPKVCATT----------HQDFP----I 46
           M+WR   ++F  A R QI++T  + +S  + ++P +  T            Q F     +
Sbjct: 1   MIWRYGCNIFQIASR-QIIRTF-AHQSYRRCTTPHINLTKILHNRLDEDIEQKFSENRQV 58

Query: 47  ILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGI 106
           IL   +V++TLLNC SDLIALSFF+WCAKQ ++FH+  +FD+M+ VV+RL  ++ETV GI
Sbjct: 59  ILTNDLVYTTLLNCSSDLIALSFFMWCAKQPNFFHNPAAFDYMVGVVSRLMKQYETVNGI 118

Query: 107 VGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK 166
           +G L  VG V KAQTFLL LRIYWRG MY +V EAFD M R+GFTPNTFARN++MDVLFK
Sbjct: 119 LGGLESVGNVTKAQTFLLLLRIYWRGGMYDLVFEAFDHMDRYGFTPNTFARNVIMDVLFK 178

Query: 167 IGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEIL 226
           +GR D+ +KV KET LPNFL+FNI LCNL K  D+  + D    M+R G+ PN   FE++
Sbjct: 179 VGRADVALKVFKETLLPNFLTFNIVLCNLSKTKDLIGIGDTFRCMLRMGYCPNPGTFEVV 238

Query: 227 LNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGC 286
           LN  CK+GR+AEAYQ+ G+M T G S+SVN WT++IDGF RLRR + A  L +KM ++GC
Sbjct: 239 LNGLCKLGRLAEAYQVWGIMTTFGISMSVNIWTIMIDGFCRLRRTEEASSLVKKMKKSGC 298

Query: 287 SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALD 346
           SPN+VTYT+LIKG++ A+  S AF  L ++ESEG +PDL+ +NVLID L+K   Y+DAL 
Sbjct: 299 SPNIVTYTTLIKGYIYAQRISDAFDVLSIIESEGPSPDLILYNVLIDSLAKNERYNDALS 358

Query: 347 VYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAG 406
           ++  L +  ++PD YTF SLL+T+CLS R  LLPKLV G  VE DLV  N+LLSY  KAG
Sbjct: 359 IFLSLHKRNILPDCYTFSSLLNTICLSKRLFLLPKLVDGFLVEVDLVACNSLLSYLGKAG 418

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
           F   A++LYN M++ G  PD YS +G+L GLC +R+I EA+ +Y GI++N   V+AH+HT
Sbjct: 419 FAALALELYNNMVNGGLMPDKYSVLGVLTGLCESRRIGEAVRLYNGILLNYTGVDAHIHT 478

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
            I+D LI+AG+ H AI++FRR ++E+  LDVVSY+VAIRGLL  GR  EA  LY+ MK  
Sbjct: 479 VIIDGLIKAGKFHSAIRIFRRNLLEENSLDVVSYSVAIRGLLLVGRNTEASNLYNYMKEA 538

Query: 527 AVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSS- 585
            + PN +   VML +FCKE+   +VK++LQ++ID  I++  +   RL   I +  + S  
Sbjct: 539 GINPNGHVCNVMLSTFCKEKKFALVKQMLQEMIDLGIKMSRNNFFRLYNAICRSSNGSHL 598

Query: 586 AVNQLVEMCNLGLIP 600
            +  L+EM  LGL+P
Sbjct: 599 VIYLLIEMKVLGLLP 613



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 71/322 (22%), Positives = 144/322 (44%), Gaps = 9/322 (2%)

Query: 292 TYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGL 351
           T+  L++ +    M+ + F   D ++  G  P+    NV++D L K+G  D AL V+   
Sbjct: 133 TFLLLLRIYWRGGMYDLVFEAFDHMDRYGFTPNTFARNVIMDVLFKVGRADVALKVFKET 192

Query: 352 LELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE--ADLVVYNALLSYFCKAGFPN 409
           L    +  +   C+L  T  L G   +     C L +    +   +  +L+  CK G   
Sbjct: 193 LLPNFLTFNIVLCNLSKTKDLIG---IGDTFRCMLRMGYCPNPGTFEVVLNGLCKLGRLA 249

Query: 410 QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
           +A +++  M   G +     +  ++ G C  R+ +EA ++ + +  +  + N   +T ++
Sbjct: 250 EAYQVWGIMTTFGISMSVNIWTIMIDGFCRLRRTEEASSLVKKMKKSGCSPNIVTYTTLI 309

Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
              I A R   A  +      E    D++ Y V I  L +  R  +A  ++  +    + 
Sbjct: 310 KGYIYAQRISDAFDVLSIIESEGPSPDLILYNVLIDSLAKNERYNDALSIFLSLHKRNIL 369

Query: 530 PNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQ 589
           P+ YT+  +L + C  + + ++ +L+   +   +E+D      L  ++ K   ++ A+  
Sbjct: 370 PDCYTFSSLLNTICLSKRLFLLPKLVDGFL---VEVDLVACNSLLSYLGKAGFAALALEL 426

Query: 590 LVEMCNLGLIPDEMWRKLGLLS 611
              M N GL+PD+ +  LG+L+
Sbjct: 427 YNNMVNGGLMPDK-YSVLGVLT 447


>gi|240254086|ref|NP_173127.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806394|sp|Q3EDA9.2|PPR46_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g16830
 gi|332191383|gb|AEE29504.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 608

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 248/598 (41%), Positives = 364/598 (60%), Gaps = 20/598 (3%)

Query: 1   MLWRCKRSLFYTAQRTQILKTIISFKSIHQISSPKVCAT---THQDFPIILAPHIVHSTL 57
           MLWRC     +  QR +IL T+ SF SIH     +  A    TH +         V+S L
Sbjct: 1   MLWRCN----WVKQRKRILNTL-SFSSIHGQYPREYTAAKPLTHDN---------VYSCL 46

Query: 58  LNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVI 117
              P+DL  L+FF WCAKQ +YFHD ++FDHM+ VV +LT  + ++  I+  L   GC I
Sbjct: 47  RESPADLKTLNFFFWCAKQNNYFHDDRAFDHMVGVVEKLTREYYSIDRIIERLKISGCEI 106

Query: 118 KAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL 177
           K + FLL L I+WRG +Y   +E +  M  FGF PNT A N++MDV FK+  V+  +++ 
Sbjct: 107 KPRVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIF 166

Query: 178 KETQLPNFLSFNIALCNLCKLN---DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
           +  +  NF SF+IAL + C      D+  VK V+  M+ +GFYPN   F  +L   C+ G
Sbjct: 167 EGIRFRNFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTG 226

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
            ++EA+Q++GLMI  G S+SVN W++L+ GF R      A  L+ KM+Q GCSPN+VTYT
Sbjct: 227 CVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYT 286

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
           SLIKGF++  M   AF+ L  ++SEG APD+V  N++I   +++G +++A  V+  L + 
Sbjct: 287 SLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKR 346

Query: 355 KLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKL 414
           KLVPD YTF S+LS++CLSG+F L+P++  G+  + DLV  N L + F K G+ + A+K+
Sbjct: 347 KLVPDQYTFASILSSLCLSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKV 406

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
            + M  K F  D Y++   L  LC       AI +Y+ I+     ++AH H+AI+D LIE
Sbjct: 407 LSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIE 466

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
            G+ + A+ LF+R I+EKYPLDVVSYTVAI+GL+   R EEAY L   MK   + PN  T
Sbjct: 467 LGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRT 526

Query: 535 YRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVE 592
           YR ++   CKE+  + V+++L++ I   +ELD +T  ++   + ++    S    + E
Sbjct: 527 YRTIISGLCKEKETEKVRKILRECIQEGVELDPNTKFQVYSLLSRYRGDFSEFRSVFE 584


>gi|297844618|ref|XP_002890190.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297336032|gb|EFH66449.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 741

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 246/592 (41%), Positives = 361/592 (60%), Gaps = 5/592 (0%)

Query: 1   MLWRCKRSLFYTAQRTQILKTIISFKSIHQISSPKVCATTHQDFPIILAPHIVHSTLLNC 60
           MLWRC     +  QR +IL T+ SF S+H   S +  A         L    V+S L   
Sbjct: 131 MLWRCN----WVKQRKKILNTL-SFSSVHGQYSLENTAGPRSIASKPLTHDNVYSCLRES 185

Query: 61  PSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQ 120
           PSDL  L+FF WCA+Q +YFHD ++FDHM+ VV +LT  + ++  I+ EL   GC IK +
Sbjct: 186 PSDLKTLNFFFWCARQNNYFHDDRAFDHMVGVVEKLTREYYSIDRIIEELKVYGCEIKPR 245

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET 180
            FLL L I+WRG +Y   ++ +  M  FG+ PNT A N++MDV FK+  V+  +++ +  
Sbjct: 246 VFLLLLEIFWRGHIYDKAIQVYTGMSSFGYVPNTRAMNMMMDVNFKVNLVNGALEIFEGI 305

Query: 181 QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAY 240
           +  NF SF+IAL + C   D+  VK V+  M+ +GFYPN   F  +L   C+ G +AEA+
Sbjct: 306 RFRNFFSFDIALSHFCSRGDLVCVKIVLKRMIGEGFYPNTERFGQILRLCCRTGCVAEAF 365

Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
           Q++GLMI  G S+SVN W++L+ GF R      A  L+ KM+Q  C PN+VTYTSLIKGF
Sbjct: 366 QVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQISCFPNLVTYTSLIKGF 425

Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
           ++  M   AF+ L  ++SEG APD+V  N++I   +++G +++A +V+  L + KLVPD 
Sbjct: 426 VDLGMVEEAFTVLSKVQSEGLAPDIVLCNLMIHTFTRLGRFEEARNVFTSLKKRKLVPDQ 485

Query: 361 YTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
           YTF S+LS++CLSG F L+P++  G+  + DLV  N L + F K G+ + A+K+   M +
Sbjct: 486 YTFVSILSSLCLSGEFDLVPRITHGIGTDFDLVTGNLLSNCFSKIGYYSYALKVLGIMSN 545

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
           K    D Y++   L  LC       AI +Y+ I   N  + AH H+AI+D LIE GR + 
Sbjct: 546 KDLALDCYTYTVYLTALCRGGAPRAAIKMYEIITRENKHLGAHFHSAIIDSLIELGRYNT 605

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
           AI LF+R I+EKYPLDVVS+TVAI+GL+   R +EA  L S MK   + PN  TYR ++ 
Sbjct: 606 AIHLFKRCILEKYPLDVVSFTVAIKGLMRAKRIDEACSLCSDMKENGIFPNRRTYRTIIS 665

Query: 541 SFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVE 592
             CKE+  + VK++L++ I+  +ELD +T  ++   + ++    S    + E
Sbjct: 666 GLCKEKETEKVKKILRECIEEGVELDPNTKFKVFSLLSRYRGDFSEFRSVFE 717


>gi|357147565|ref|XP_003574395.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g16830-like [Brachypodium distachyon]
          Length = 623

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 213/554 (38%), Positives = 323/554 (58%)

Query: 45  PIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVR 104
           P  L+P +V + +  CPSD +ALSFF+WCA++  YFH   SFD ++   TRL  R     
Sbjct: 27  PPPLSPRLVDAAVSRCPSDALALSFFLWCARRPAYFHPPSSFDRVLPAATRLASRLPAAP 86

Query: 105 GIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVL 164
            ++ EL  +GC I   TFLL LR+YWRG +Y +VL  FD+M  +GF  N FARNI +DVL
Sbjct: 87  ELLCELQNLGCPISPHTFLLLLRLYWRGGLYPLVLNLFDQMPLWGFHHNIFARNIALDVL 146

Query: 165 FKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFE 224
            + GRVD  +  +++   PN+L++ I L +LC+  D S V+     M+++G  P+     
Sbjct: 147 LRTGRVDAALIFMQDNPSPNYLTYAIVLTHLCRAGDWSGVRTCFRAMLQQGLIPSSASLA 206

Query: 225 ILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN 284
            +  C  K G ++E  QL    +  G  ++   W+ LI       RLD A  + E MV+ 
Sbjct: 207 SVFACCSKAGTMSELLQLFSYALVSGRQITSVMWSCLIARICSEGRLDEACIILENMVRC 266

Query: 285 GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
           G SP VVTYT L++G   A         L  + S G  PDLV +NVL+DC+ K   YD+A
Sbjct: 267 GSSPTVVTYTPLVRGLFRAGRHDKVSELLGSMASNGCNPDLVLYNVLMDCMMKERRYDEA 326

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCK 404
           LD+Y  L + ++ PD+YT  +L+  + LS    LLP+L+ G ++  DLV  N++LS  CK
Sbjct: 327 LDIYLNLHQSQIKPDAYTLSTLVHVLQLSHNIDLLPRLILGSDISYDLVACNSVLSALCK 386

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV 464
           +GFP++A++ Y   +  G  PD+YS+VGLL  LC   +ID AINVY+ ++ +NP  +A++
Sbjct: 387 SGFPSEALQFYIDKIGLGIRPDSYSYVGLLDSLCQLGRIDHAINVYRSVLASNPDSDAYI 446

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
           H++I+  L+   + + A  +FR A+ + Y LDVV YT+ + GL      EEA  L+ +MK
Sbjct: 447 HSSILRGLVSRRQNNMAFAIFREAVRQNYALDVVCYTIVLHGLFRAHLIEEACDLFDKMK 506

Query: 525 HIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSS 584
           H  + PN  TY VML   C+ +++  V +LL ++    +++D  +   +   + K    S
Sbjct: 507 HSGIAPNTCTYNVMLRGLCRTQDMHAVTQLLGEMECTNVQMDSISFNVVVVLLVKLQHIS 566

Query: 585 SAVNQLVEMCNLGL 598
           SA+  + EM NLG+
Sbjct: 567 SAIGLIREMHNLGM 580


>gi|356573455|ref|XP_003554875.1| PREDICTED: uncharacterized protein LOC100816100 [Glycine max]
          Length = 1122

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 225/490 (45%), Positives = 312/490 (63%), Gaps = 19/490 (3%)

Query: 56  TLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGC 115
           +L  CPSDLIALS F+W A++R   HD  +FD +++V+ RLT R++TV  I+  L  +GC
Sbjct: 37  SLSRCPSDLIALSLFLWSAQRRR--HDSFAFDRIVTVLLRLTHRYDTVPAILSHLETIGC 94

Query: 116 --VIKAQTFLLFLRIYWRGEMYGMVLEAFDEM-GRFGFTPNTFARNIVMDVLFKIGRVDL 172
             +    + L+ LRIY R  MY M+LEA+  +   + F P+TFARN+VMD LF++G   L
Sbjct: 95  ASLTNPVSQLVLLRIYSRAGMYAMLLEAYHHLQASYAFVPDTFARNLVMDALFRVGHSHL 154

Query: 173 GI----KVLKETQLPNFLSFNIALCNLCKLNDV------SNVKDVIGMMVRKGFYPNVRM 222
            +     +   T  PNF +F+I L +L KLN+        ++  ++ +++  G+ P+   
Sbjct: 155 ALTLTLSLFSHTHPPNFFTFHILLLHLSKLNNNNLNLYLPHIARILRLLLWAGYSPSPLT 214

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           F++LLN  CK+    +AYQLL LM  LG + SVN WT+LI  + +  RL +A  L+  M+
Sbjct: 215 FQMLLNSLCKINAFPQAYQLLALMTALGINFSVNIWTILIHNYCKFGRLRLANNLFHNML 274

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
           Q GCSPNVVTYT L K FM++ M + AF   +++ S G +PDL+  NVLIDCLSK G   
Sbjct: 275 QTGCSPNVVTYTILFKAFMQSNMPTPAFRLFNIMLSSGQSPDLILCNVLIDCLSKAGRCQ 334

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV-CGLEVEADLVVYNALLSY 401
           DA+ V+  L E  L PDSYTF SLLST+C S  F LLPKLV     ++ADLV  NALLS 
Sbjct: 335 DAIQVFLSLSERNLKPDSYTFASLLSTICRSRMFYLLPKLVLVSRHIDADLVFCNALLSS 394

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVN 461
             KA  P+ AV  Y+ M+D+GF PD Y+F GLL  LC A ++D+A+NVY G+VM+    +
Sbjct: 395 LTKADLPSLAVGFYDHMIDEGFVPDKYTFAGLLSALCCAGRVDKAVNVYHGVVMSYHDTD 454

Query: 462 AHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY- 520
           AH+HT I+  L++ G+ HKA+ + R A++ KYPLD V+YTV I  LL G RT+EA  L  
Sbjct: 455 AHIHTVIIVGLLKTGKFHKAVSVLRFAVMNKYPLDTVAYTVGICALLRGRRTQEACTLQL 514

Query: 521 --SQMKHIAV 528
               +KH AV
Sbjct: 515 VIRYVKHRAV 524



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 72/359 (20%), Positives = 144/359 (40%), Gaps = 15/359 (4%)

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSP--NVVTYTSLIKGFMEAKMFSIAFSFLDMLE-SEGH 321
            R   R D    +   +   GC+   N V+   L++ +  A M+++       L+ S   
Sbjct: 73  LRLTHRYDTVPAILSHLETIGCASLTNPVSQLVLLRIYSRAGMYAMLLEAYHHLQASYAF 132

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF---------CSLLSTVCL 372
            PD    N+++D L ++G    AL +   L      P+ +TF          +  +    
Sbjct: 133 VPDTFARNLVMDALFRVGHSHLALTLTLSLFSHTHPPNFFTFHILLLHLSKLNNNNLNLY 192

Query: 373 SGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
               + + +L+         + +  LL+  CK     QA +L   M   G       +  
Sbjct: 193 LPHIARILRLLLWAGYSPSPLTFQMLLNSLCKINAFPQAYQLLALMTALGINFSVNIWTI 252

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           L+   C   ++  A N++  ++    + N   +T +    +++     A +LF   +   
Sbjct: 253 LIHNYCKFGRLRLANNLFHNMLQTGCSPNVVTYTILFKAFMQSNMPTPAFRLFNIMLSSG 312

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVK 552
              D++   V I  L + GR ++A  ++  +    + P++YT+  +L + C+ R   ++ 
Sbjct: 313 QSPDLILCNVLIDCLSKAGRCQDAIQVFLSLSERNLKPDSYTFASLLSTICRSRMFYLLP 372

Query: 553 RLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLS 611
           +L+  ++   I+ D      L   + K    S AV     M + G +PD+ +   GLLS
Sbjct: 373 KLV--LVSRHIDADLVFCNALLSSLTKADLPSLAVGFYDHMIDEGFVPDK-YTFAGLLS 428



 Score = 45.4 bits (106), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 52/260 (20%), Positives = 103/260 (39%), Gaps = 7/260 (2%)

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
           L +L   G++P  +   +L++ L K+ ++  A  +   +  L +      +  L+   C 
Sbjct: 200 LRLLLWAGYSPSPLTFQMLLNSLCKINAFPQAYQLLALMTALGINFSVNIWTILIHNYCK 259

Query: 373 SGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
            GR  L   L   +       ++V Y  L   F ++  P  A +L+N ML  G +PD   
Sbjct: 260 FGRLRLANNLFHNMLQTGCSPNVVTYTILFKAFMQSNMPTPAFRLFNIMLSSGQSPDLIL 319

Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
              L+  L  A +  +AI V+  +   N   +++   +++  +    R      L +  +
Sbjct: 320 CNVLIDCLSKAGRCQDAIQVFLSLSERNLKPDSYTFASLLSTIC---RSRMFYLLPKLVL 376

Query: 490 VEKY-PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
           V ++   D+V     +  L +      A   Y  M      P+ YT+  +L + C    +
Sbjct: 377 VSRHIDADLVFCNALLSSLTKADLPSLAVGFYDHMIDEGFVPDKYTFAGLLSALCCAGRV 436

Query: 549 KMVKRLLQDVIDARIELDYH 568
                +   V+ +  + D H
Sbjct: 437 DKAVNVYHGVVMSYHDTDAH 456


>gi|125533078|gb|EAY79643.1| hypothetical protein OsI_34787 [Oryza sativa Indica Group]
          Length = 631

 Score =  407 bits (1045), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 215/564 (38%), Positives = 321/564 (56%), Gaps = 4/564 (0%)

Query: 53  VHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELAR 112
           V +T+  CPSD +A++FF+WCA+   YFH   SFD ++    RL  R  T   I+ +L  
Sbjct: 42  VDATVSRCPSDALAITFFLWCARCPAYFHPPSSFDRLLPAAARLASRLRTAPAILHQLRA 101

Query: 113 VGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDL 172
           +GC I+  TFLL LR+YWRG +Y +VL+ FD+M  +GF PN FARN+V+DVL +      
Sbjct: 102 LGCPIRPHTFLLLLRLYWRGGIYPLVLQLFDQMPLWGFHPNAFARNVVLDVLLRTRHHHS 161

Query: 173 GIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCK 232
            +  L++   PN+L++ I L +LC+  +   V+     M+ +GF P+      +  C  K
Sbjct: 162 ALCFLRDNPSPNYLTYAILLTHLCRSGNWPGVRACFLAMLHQGFLPSAASLNAVFACCTK 221

Query: 233 MGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVT 292
           +   +E  QLLG  +  G  L+   WT LI    R  +LD A  +  KM+ +G  P VVT
Sbjct: 222 LAATSELLQLLGFTLVSGYQLTSAMWTCLIARLCREGKLDEAIRMLAKMLASGSPPTVVT 281

Query: 293 YTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
           YT +++    A    IA      + S   +PDLV HNVL+DC++K   YD AL VY  L 
Sbjct: 282 YTPIVRALYRAGRHDIATELFASMSSTNCSPDLVLHNVLMDCMTKDKRYDAALGVYLNLH 341

Query: 353 ELKLVPDSYTFCSLLSTVCLSGRFSLLPKL-VCGLEVEADLVVYNALLSYFCKAGFPNQA 411
           E ++ PD+YT  +L+  + LS   SLLP+L +   ++  DLV  N++L+  CK+GFP+QA
Sbjct: 342 ESQMKPDAYTLSTLVRALHLSRNVSLLPRLFLDSADIPYDLVACNSVLNALCKSGFPSQA 401

Query: 412 VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
           V+ +  M+     PD+YS+VGLL  LC   +ID AINVY  IV ++P  NA+VH AI+  
Sbjct: 402 VQFFINMIKCDIRPDSYSYVGLLDSLCQLGRIDHAINVYHSIVSSDPDSNAYVHAAILCG 461

Query: 472 LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
           L++ G    A+ +   A+ + Y LD V YTV + GLL+    EEA +L+ +MK   +  N
Sbjct: 462 LVKKGHNRMALMILNEAVRQNYALDAVCYTVVLHGLLQAHLIEEACMLFDKMKRSGMASN 521

Query: 532 AYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLV 591
             TY +ML   C+ R+   +K  L+++  + +E+D  +   L  F+ K    SSA   + 
Sbjct: 522 TCTYNIMLRGLCRTRDTHALKWFLREMECSDVEMDSISYNILVVFLIKLQHISSATALVR 581

Query: 592 EMCNLGLIPDEMWRKLGLLSDETM 615
           EM NLG+   E+  K   L  ++M
Sbjct: 582 EMVNLGM---ELSAKTSSLISQSM 602


>gi|110289653|gb|AAP55169.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 631

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 214/564 (37%), Positives = 320/564 (56%), Gaps = 4/564 (0%)

Query: 53  VHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELAR 112
           V +T+  CPSD +A++FF+WCA+   YFH   SFD ++    RL  R  T   I+ +L  
Sbjct: 42  VDATVSRCPSDALAITFFLWCARCPAYFHPPSSFDRLLPAAARLASRLRTAPAILHQLRA 101

Query: 113 VGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDL 172
           +GC I+  TFLL LR+YWRG +Y +VL+ FD+M  +GF PN FARN+V+DVL +      
Sbjct: 102 LGCPIRPHTFLLLLRLYWRGGIYPLVLQLFDQMPLWGFHPNAFARNVVLDVLLRTRHHHS 161

Query: 173 GIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCK 232
            +  L++   PN+L++ I L +LC+  +   V+     M+ +GF P+      +  C  K
Sbjct: 162 ALCFLRDNPSPNYLTYAILLTHLCRSGNWPGVRACFLAMLHQGFLPSAASLNAVFACCTK 221

Query: 233 MGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVT 292
           +   +E  QLLG  +  G  L+   WT LI    R  +LD A  +  KM+ +G  P VVT
Sbjct: 222 LAATSELLQLLGFTLVSGYQLTSAMWTCLIARLCREGKLDEAIRMLAKMLASGSPPTVVT 281

Query: 293 YTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
           YT +++    A    IA      + S   +PDLV HNVL+DC++K   YD AL VY  L 
Sbjct: 282 YTPIVRALYRAGRHDIATELFASMSSTNCSPDLVLHNVLMDCMTKDKRYDAALGVYLNLH 341

Query: 353 ELKLVPDSYTFCSLLSTVCLSGRFSLLPKL-VCGLEVEADLVVYNALLSYFCKAGFPNQA 411
           E ++ PD+YT  +L+  + LS   SLLP+L +   ++  DLV  N++L+   K+GFP+QA
Sbjct: 342 ESQMKPDAYTLSTLVRALHLSRNVSLLPRLFLDSADIPYDLVACNSVLNALRKSGFPSQA 401

Query: 412 VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
           V+ +  M+     PD+YS+VGLL  LC   +ID AINVY  IV ++P  NA+VH AI+  
Sbjct: 402 VQFFINMIKCDIRPDSYSYVGLLDSLCQLGRIDHAINVYHSIVSSDPDSNAYVHAAILCG 461

Query: 472 LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
           L++ G    A+ +   A+ + Y LD V YTV + GLL+    EEA +L+ +MK   +  N
Sbjct: 462 LVKKGHNRMALMILNEAVRQNYALDAVCYTVVLHGLLQAHLIEEACMLFDKMKRSGMASN 521

Query: 532 AYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLV 591
             TY +ML   C+ R+   +K  L+++  + +E+D  +   L  F+ K    SSA   + 
Sbjct: 522 TCTYNIMLRGLCRTRDTHALKWFLREMECSDVEMDSISYNILVVFLIKLQHISSATALVR 581

Query: 592 EMCNLGLIPDEMWRKLGLLSDETM 615
           EM NLG+   E+  K   L  ++M
Sbjct: 582 EMVNLGM---ELSAKTSSLISQSM 602


>gi|222613334|gb|EEE51466.1| hypothetical protein OsJ_32592 [Oryza sativa Japonica Group]
          Length = 706

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 214/564 (37%), Positives = 320/564 (56%), Gaps = 4/564 (0%)

Query: 53  VHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELAR 112
           V +T+  CPSD +A++FF+WCA+   YFH   SFD ++    RL  R  T   I+ +L  
Sbjct: 117 VDATVSRCPSDALAITFFLWCARCPAYFHPPSSFDRLLPAAARLASRLRTAPAILHQLRA 176

Query: 113 VGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDL 172
           +GC I+  TFLL LR+YWRG +Y +VL+ FD+M  +GF PN FARN+V+DVL +      
Sbjct: 177 LGCPIRPHTFLLLLRLYWRGGIYPLVLQLFDQMPLWGFHPNAFARNVVLDVLLRTRHHHS 236

Query: 173 GIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCK 232
            +  L++   PN+L++ I L +LC+  +   V+     M+ +GF P+      +  C  K
Sbjct: 237 ALCFLRDNPSPNYLTYAILLTHLCRSGNWPGVRACFLAMLHQGFLPSAASLNAVFACCTK 296

Query: 233 MGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVT 292
           +   +E  QLLG  +  G  L+   WT LI    R  +LD A  +  KM+ +G  P VVT
Sbjct: 297 LAATSELLQLLGFTLVSGYQLTSAMWTCLIARLCREGKLDEAIRMLAKMLASGSPPTVVT 356

Query: 293 YTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
           YT +++    A    IA      + S   +PDLV HNVL+DC++K   YD AL VY  L 
Sbjct: 357 YTPIVRALYRAGRHDIATELFASMSSTNCSPDLVLHNVLMDCMTKDKRYDAALGVYLNLH 416

Query: 353 ELKLVPDSYTFCSLLSTVCLSGRFSLLPKL-VCGLEVEADLVVYNALLSYFCKAGFPNQA 411
           E ++ PD+YT  +L+  + LS   SLLP+L +   ++  DLV  N++L+   K+GFP+QA
Sbjct: 417 ESQMKPDAYTLSTLVRALHLSRNVSLLPRLFLDSADIPYDLVACNSVLNALRKSGFPSQA 476

Query: 412 VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
           V+ +  M+     PD+YS+VGLL  LC   +ID AINVY  IV ++P  NA+VH AI+  
Sbjct: 477 VQFFINMIKCDIRPDSYSYVGLLDSLCQLGRIDHAINVYHSIVSSDPDSNAYVHAAILCG 536

Query: 472 LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
           L++ G    A+ +   A+ + Y LD V YTV + GLL+    EEA +L+ +MK   +  N
Sbjct: 537 LVKKGHNRMALMILNEAVRQNYALDAVCYTVVLHGLLQAHLIEEACMLFDKMKRSGMASN 596

Query: 532 AYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLV 591
             TY +ML   C+ R+   +K  L+++  + +E+D  +   L  F+ K    SSA   + 
Sbjct: 597 TCTYNIMLRGLCRTRDTHALKWFLREMECSDVEMDSISYNILVVFLIKLQHISSATALVR 656

Query: 592 EMCNLGLIPDEMWRKLGLLSDETM 615
           EM NLG+   E+  K   L  ++M
Sbjct: 657 EMVNLGM---ELSAKTSSLISQSM 677


>gi|357503345|ref|XP_003621961.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496976|gb|AES78179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 646

 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 225/553 (40%), Positives = 330/553 (59%), Gaps = 26/553 (4%)

Query: 61  PSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCV---- 116
           P DLI L  F+  +K   +     + + M+ V  R+   ++T + I+ +L  +G +    
Sbjct: 16  PFDLITLGSFLRSSKPNSF-----AINQMLPVFARVIHHYKTHQTILSKLVSIGSINLST 70

Query: 117 --IKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRF-GF--TPNTFARNIVMDVLFKIGRVD 171
             I    F+  LRI+ R   + ++++  D M  F GF  +  TFA N++M+ LFK  +  
Sbjct: 71  ININPNPFINLLRIFSRSGNHELLIKTCDYMVEFHGFQISSKTFASNLLMESLFKASQPK 130

Query: 172 LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFC 231
              K+  ET+ PNFL+FNIAL +L   ND+ NVK V+  M+R  + PN   F  +LN FC
Sbjct: 131 NAFKIFGETRSPNFLTFNIALFHLSNFNDIVNVKYVLREMLRLRYCPNASTFSAVLNAFC 190

Query: 232 KMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVV 291
           KM    + YQ+LGLMI LG  LSVN WTVLI  F +L +LD+A  L++KM+Q+ CSPN V
Sbjct: 191 KMNAFRQVYQILGLMIGLGIELSVNVWTVLIHHFCKLGKLDVADDLFDKMIQSCCSPNSV 250

Query: 292 TYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGL 351
           TYT LIK  ME+   ++A      + S G  PDLVF+N+LIDCLSK G +++A+ V++  
Sbjct: 251 TYTPLIKAVMESDDVTLALRLEQKMNSVGIVPDLVFYNMLIDCLSKSGMHEEAIRVFE-- 308

Query: 352 LELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE-VEADLVVYNALLSYFCKAGFPNQ 410
            +    PD YTF SLLS +C S +F LLPKLV   + +  DLV  NALL  + KAG+ ++
Sbjct: 309 -QKNFKPDKYTFTSLLSAICRSEQFDLLPKLVQHCKHISRDLVFCNALLISYVKAGYSSR 367

Query: 411 AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
           A++LY  M+ +GF PD Y+F GLL  LC   + DEA+ V++ + M++   + H+HT I +
Sbjct: 368 ALELYERMISEGFKPDKYTFAGLLSALCAENRNDEAVKVWRAVTMDHTD-DVHIHTVISN 426

Query: 471 RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
            L +AG+  +A  +F    V+KYPLD ++Y V I   L  GRT EA  LY QMK   + P
Sbjct: 427 ELKKAGQYEQASDVFISEAVKKYPLDSIAYGVGIDAHLRSGRTLEARTLYDQMKKNGLEP 486

Query: 531 NAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQL 590
           N  T+ ++L    + ++++MVK+LLQD+ID+RI+L       L KF   +       N L
Sbjct: 487 NFQTFNMILFRSLEVKDLQMVKQLLQDMIDSRIKLSDRNFFNLRKFQCNW-------NLL 539

Query: 591 VEMCNLGLIPDEM 603
            EM +LGL+  ++
Sbjct: 540 TEMRDLGLLSSKV 552


>gi|414867944|tpg|DAA46501.1| TPA: hypothetical protein ZEAMMB73_380894 [Zea mays]
          Length = 625

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 210/575 (36%), Positives = 321/575 (55%), Gaps = 2/575 (0%)

Query: 52  IVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELA 111
           IV + +  CPSD IALSFF+WCA++  YFH   SFD ++   +RL  R  T   ++ EL 
Sbjct: 34  IVEAAVARCPSDGIALSFFLWCARRPGYFHPPSSFDRLLPAASRLASRLGTANKLIRELQ 93

Query: 112 RVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD 171
            +G  +K QTFLL LR+YWRG +Y +VL+ F +M  +GF PN FA N+V+DV  + G +D
Sbjct: 94  ALGVHVKPQTFLLLLRLYWRGGLYPIVLDLFYQMRLWGFQPNAFACNVVLDVQLRTGHLD 153

Query: 172 LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFC 231
                L+    PN+L++ I L +LC+    S  +     M++ GF P+      +  C  
Sbjct: 154 AARHTLQYYPAPNYLTYAIVLTHLCRAGGWSGARSCFIEMLQLGFVPSAASLTAVFACCS 213

Query: 232 KMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVV 291
           K G ++E  QL    +  G +L+   WT LI    R  RL+ A  +  KM  +G SP+VV
Sbjct: 214 KAGTMSELLQLFSFALVSGCNLTSAMWTCLIARLCREGRLEEACNMLAKMADSGSSPSVV 273

Query: 292 TYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGL 351
           TYT L++G + A     A   L  + S    PD+V +NVL+D + K   Y++AL++Y  +
Sbjct: 274 TYTPLVRGLLRAGRHEKASELLGSMMSASCRPDIVLYNVLMDSMLKERRYNEALNIYMHI 333

Query: 352 LELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQA 411
           L  ++ PD+YT  +L   +  S    LL  L+   ++  DLV  N++LS  CK+GFP++A
Sbjct: 334 LGSQIKPDAYTLSTLAQVLQFSQNMGLLHSLILSSDISLDLVACNSVLSSLCKSGFPSEA 393

Query: 412 VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
           ++ Y   +D   +PD+Y+  GLL  LC   +++ AI+VY  I+ + P +NA+VH AI+  
Sbjct: 394 IQFYIDRIDTCTSPDSYTHAGLLDSLCQLGRVNHAIDVYHNIIASAPELNAYVHAAILRG 453

Query: 472 LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
           L+  G+   A+++ R A+ + Y +D V YTV + GL      EEA+ L+ QMK+  + PN
Sbjct: 454 LVRQGQSLAALRILREAVRKNYAVDSVCYTVVLHGLFRVHLVEEAFRLFDQMKNSGLAPN 513

Query: 532 AYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLV 591
             TY VML   C+ R++  VK+LL ++  A  ++D  +   +   + K     SAV  + 
Sbjct: 514 TCTYNVMLCGLCRTRDLHAVKQLLTEMECADAKMDSISFNTVAVLLIKSKRIDSAVALIR 573

Query: 592 EMCNLGLIPDEMWRKLGLLSDETMTPVSLFDGFVP 626
           +M NLG+ P    R   LLS  T+    L D   P
Sbjct: 574 DMLNLGMKPSTKTRL--LLSQSTVYKSVLVDNATP 606


>gi|12039381|gb|AAG46167.1|AC018727_19 unknown protein [Oryza sativa Japonica Group]
          Length = 601

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 205/536 (38%), Positives = 306/536 (57%), Gaps = 1/536 (0%)

Query: 53  VHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELAR 112
           V +T+  CPSD +A++FF+WCA+   YFH   SFD ++    RL  R  T   I+ +L  
Sbjct: 42  VDATVSRCPSDALAITFFLWCARCPAYFHPPSSFDRLLPAAARLASRLRTAPAILHQLRA 101

Query: 113 VGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDL 172
           +GC I+  TFLL LR+YWRG +Y +VL+ FD+M  +GF PN FARN+V+DVL +      
Sbjct: 102 LGCPIRPHTFLLLLRLYWRGGIYPLVLQLFDQMPLWGFHPNAFARNVVLDVLLRTRHHHS 161

Query: 173 GIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCK 232
            +  L++   PN+L++ I L +LC+  +   V+     M+ +GF P+      +  C  K
Sbjct: 162 ALCFLRDNPSPNYLTYAILLTHLCRSGNWPGVRACFLAMLHQGFLPSAASLNAVFACCTK 221

Query: 233 MGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVT 292
           +   +E  QLLG  +  G  L+   WT LI    R  +LD A  +  KM+ +G  P VVT
Sbjct: 222 LAATSELLQLLGFTLVSGYQLTSAMWTCLIARLCREGKLDEAIRMLAKMLASGSPPTVVT 281

Query: 293 YTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
           YT +++    A    IA      + S   +PDLV HNVL+DC++K   YD AL VY  L 
Sbjct: 282 YTPIVRALYRAGRHDIATELFASMSSTNCSPDLVLHNVLMDCMTKDKRYDAALGVYLNLH 341

Query: 353 ELKLVPDSYTFCSLLSTVCLSGRFSLLPKL-VCGLEVEADLVVYNALLSYFCKAGFPNQA 411
           E ++ PD+YT  +L+  + LS   SLLP+L +   ++  DLV  N++L+   K+GFP+QA
Sbjct: 342 ESQMKPDAYTLSTLVRALHLSRNVSLLPRLFLDSADIPYDLVACNSVLNALRKSGFPSQA 401

Query: 412 VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
           V+ +  M+     PD+YS+VGLL  LC   +ID AINVY  IV ++P  NA+VH AI+  
Sbjct: 402 VQFFINMIKCDIRPDSYSYVGLLDSLCQLGRIDHAINVYHSIVSSDPDSNAYVHAAILCG 461

Query: 472 LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
           L++ G    A+ +   A+ + Y LD V YTV + GLL+    EEA +L+ +MK   +  N
Sbjct: 462 LVKKGHNRMALMILNEAVRQNYALDAVCYTVVLHGLLQAHLIEEACMLFDKMKRSGMASN 521

Query: 532 AYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAV 587
             TY +ML   C+ R+   +K  L+++  + +E+D  +   L  F+ K    SSA 
Sbjct: 522 TCTYNIMLRGLCRTRDTHALKWFLREMECSDVEMDSISYNILVVFLIKLQHISSAT 577


>gi|242034947|ref|XP_002464868.1| hypothetical protein SORBIDRAFT_01g027870 [Sorghum bicolor]
 gi|241918722|gb|EER91866.1| hypothetical protein SORBIDRAFT_01g027870 [Sorghum bicolor]
          Length = 594

 Score =  348 bits (894), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 197/575 (34%), Positives = 305/575 (53%), Gaps = 37/575 (6%)

Query: 52  IVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELA 111
           IV + +  CPSD +ALSFF+WCA++  YFH   SFD ++   +R   R  T   ++ EL 
Sbjct: 38  IVEAAVARCPSDGLALSFFLWCARRPGYFHPPSSFDRLLPAASRFASRLGTANELIRELQ 97

Query: 112 RVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD 171
            +G  +K QTFLL LR+YWRG +Y                   +AR+             
Sbjct: 98  ALGVPVKPQTFLLLLRLYWRGGLY------------------PYARH------------- 126

Query: 172 LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFC 231
                L+    PN+L++ I L +LC+    S  +     M++ GF P+      +  C  
Sbjct: 127 ----TLQYYPTPNYLTYAIVLTHLCRAGAWSGARSCFMEMLQLGFLPSAASLTAVFACCS 182

Query: 232 KMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVV 291
           K G ++E  QLL   +  G  LS   WT LI    R  RL+ A  +  KMV +G SP+VV
Sbjct: 183 KAGTVSELLQLLSFALVSGCKLSSAMWTCLIARLCREGRLEEACNMLAKMVDSGSSPSVV 242

Query: 292 TYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGL 351
           TYT L++GF+ A     A   L  + S   +PD+V +NVL+D ++K   Y++ALD+Y  +
Sbjct: 243 TYTPLVRGFLRAGRHEKARELLGSMMSASCSPDIVLYNVLMDSMAKERRYNEALDIYMHI 302

Query: 352 LELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQA 411
              ++ PD+YT  +L   +  S    LL +L+   ++  DLV  N++LS  CK+GFP++A
Sbjct: 303 HGSQIKPDAYTLSTLARVLQFSQNMGLLHRLILRSDISLDLVACNSVLSALCKSGFPSEA 362

Query: 412 VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
           ++ Y   ++   + D+Y+ VGLL  LC   +++ AI+VY  I+ + P  NA+VH AI+  
Sbjct: 363 IQFYIDRIETCTSSDSYTHVGLLDSLCQLGRVNHAIDVYHNIIASAPESNAYVHAAILCG 422

Query: 472 LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
           L+  G+   A+++ R A+ +KY ++ V YTV + GL      EEA+ L+ QMK+  + PN
Sbjct: 423 LVRQGQSLAALRILREAVRKKYAVNSVCYTVVLHGLFCVHLVEEAFRLFDQMKNSGLAPN 482

Query: 532 AYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLV 591
             TY VML   C+ R++  VK+LL ++  A +++D  +   +   + K     SAV  + 
Sbjct: 483 TCTYNVMLRGLCRTRDLHAVKQLLTEMECADVKMDSISFNTVAVLLIKSQRIDSAVALIR 542

Query: 592 EMCNLGLIPDEMWRKLGLLSDETMTPVSLFDGFVP 626
           +M NLG+ P    R   LLS  T+    L D   P
Sbjct: 543 DMLNLGMKPSN--RTCSLLSQSTVYKSVLVDNTTP 575


>gi|255552436|ref|XP_002517262.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223543633|gb|EEF45162.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 321

 Score =  327 bits (838), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 156/254 (61%), Positives = 195/254 (76%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
           +L  F   + Q +YFH  Q+FDHM+SVV RL+ R+ TVR IV EL  VG VIKA TFLL 
Sbjct: 23  SLRHFSSSSTQNNYFHSNQAFDHMVSVVVRLSNRYMTVRAIVRELESVGLVIKAHTFLLL 82

Query: 126 LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF 185
           LRIYWRG MY MV E F++MGRFGF PNTFA N+VMDVLFKIG+VD GIK+LKE + PNF
Sbjct: 83  LRIYWRGGMYSMVFETFEQMGRFGFEPNTFAHNVVMDVLFKIGQVDTGIKILKEMKSPNF 142

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGL 245
           LS+NIAL NLCKLND+  VK  + +M+ KG+YPNV  FE++LNC CK+GR+ EA QLL +
Sbjct: 143 LSYNIALTNLCKLNDLVKVKKALRIMLSKGYYPNVETFEMVLNCCCKLGRLVEACQLLAM 202

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           MIT+G SLSV+AW++LID   RL + +MA +L E+MV + CSPNVVTYT+L KGF+E+KM
Sbjct: 203 MITVGISLSVSAWSILIDWLCRLNQPNMAFHLMERMVDSSCSPNVVTYTTLFKGFIESKM 262

Query: 306 FSIAFSFLDMLESE 319
              AF  L  ++S+
Sbjct: 263 ILRAFGILTAMQSK 276



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 114/256 (44%), Gaps = 47/256 (18%)

Query: 292 TYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVY--- 348
           T+  L++ +    M+S+ F   + +   G  P+   HNV++D L K+G  D  + +    
Sbjct: 78  TFLLLLRIYWRGGMYSMVFETFEQMGRFGFEPNTFAHNVVMDVLFKIGQVDTGIKILKEM 137

Query: 349 ------------------DGLLELKLV----------PDSYTFCSLLSTVCLSGRF---S 377
                             + L+++K            P+  TF  +L+  C  GR     
Sbjct: 138 KSPNFLSYNIALTNLCKLNDLVKVKKALRIMLSKGYYPNVETFEMVLNCCCKLGRLVEAC 197

Query: 378 LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
            L  ++  + +   +  ++ L+ + C+   PN A  L   M+D   +P+  ++  L +G 
Sbjct: 198 QLLAMMITVGISLSVSAWSILIDWLCRLNQPNMAFHLMERMVDSSCSPNVVTYTTLFKGF 257

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
             ++ I  A  +   +                D LI +G+C+KA+ LFRRAI E Y LD 
Sbjct: 258 IESKMILRAFGILTAMQSK-------------DGLIISGKCYKAVSLFRRAIEENYQLDA 304

Query: 498 VSYTVAIRGLLEGGRT 513
           VSYTVAI GL++ GRT
Sbjct: 305 VSYTVAICGLVKSGRT 320


>gi|449488578|ref|XP_004158095.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g16830-like [Cucumis sativus]
          Length = 525

 Score =  285 bits (729), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 152/339 (44%), Positives = 217/339 (64%), Gaps = 9/339 (2%)

Query: 204 VKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLID 263
           V  ++G +   G     + F +LL  + + G     ++    M   G + +  A  V++D
Sbjct: 115 VNGILGGLENVGNVTKAQTFLLLLRIYWRGGMYDLVFEAFDHMDRYGFTPNTFARNVIMD 174

Query: 264 GFRRLRRLDMA---------GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
              ++ R D+A          +  EK  ++GCSPN+VTYT+LIKG++ A+  S AF  L 
Sbjct: 175 VLFKVGRADVALKIAQNRRSFFFGEKDEKSGCSPNIVTYTTLIKGYIYAQRISDAFDVLS 234

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
           ++ESEG +PDL+ +NVLID L+K   Y+DAL ++  L +  ++PD YTF SLL+T+CLS 
Sbjct: 235 IIESEGPSPDLILYNVLIDSLAKNERYNDALSIFLSLHKRNILPDCYTFSSLLNTICLSK 294

Query: 375 RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
           R  LLPKLV G  VE DLV  N+LLSY  KAGF   A++LYN M++ G  PD YS +G+L
Sbjct: 295 RLFLLPKLVDGFLVEVDLVACNSLLSYLGKAGFAALALELYNNMVNGGLMPDKYSVLGVL 354

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            GLC +R+I EA+ +Y GI++N   V+AH+HT I+D LI+AG+ H AI++FRR ++E+  
Sbjct: 355 TGLCESRRIGEAVRLYNGILLNYTGVDAHIHTVIIDGLIKAGKFHSAIRIFRRNLLEENS 414

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
           LDVVSY+VAIRGLL  GR  EA  LY+ MK   + PN +
Sbjct: 415 LDVVSYSVAIRGLLLVGRNTEASNLYNYMKEAGINPNGH 453



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 166/489 (33%), Positives = 259/489 (52%), Gaps = 46/489 (9%)

Query: 1   MLWRCKRSLFYTAQRTQILKTIISFKSIHQISSPKVCATT----------HQDFP----I 46
           M+WR   ++F  A R QI++T  + +S  + ++P +  T            Q F     +
Sbjct: 1   MIWRYGCNIFQIASR-QIIRTF-AHQSYRRCTTPHINLTKILHNRLDEDIEQKFSENRQV 58

Query: 47  ILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGI 106
           IL   +V++TLLNC SDLIALSFF+WCAKQ ++FH+  +FD+M+ VV+RL  ++ETV GI
Sbjct: 59  ILTNDLVYTTLLNCSSDLIALSFFMWCAKQPNFFHNPAAFDYMVGVVSRLMKQYETVNGI 118

Query: 107 VGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK 166
           +G L  VG V KAQTFLL LRIYWRG MY +V EAFD M R+GFTPNTFARN++MDVLFK
Sbjct: 119 LGGLENVGNVTKAQTFLLLLRIYWRGGMYDLVFEAFDHMDRYGFTPNTFARNVIMDVLFK 178

Query: 167 IGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEIL 226
           +GR D+ +K+ +     N  SF                KD      + G  PN+  +  L
Sbjct: 179 VGRADVALKIAQ-----NRRSFFFG------------EKD-----EKSGCSPNIVTYTTL 216

Query: 227 LNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGC 286
           +  +    RI++A+ +L ++ + G S  +  + VLID   +  R + A  ++  + +   
Sbjct: 217 IKGYIYAQRISDAFDVLSIIESEGPSPDLILYNVLIDSLAKNERYNDALSIFLSLHKRNI 276

Query: 287 SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALD 346
            P+  T++SL+     +K   +    +D    E    DLV  N L+  L K G    AL+
Sbjct: 277 LPDCYTFSSLLNTICLSKRLFLLPKLVDGFLVE---VDLVACNSLLSYLGKAGFAALALE 333

Query: 347 VYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE---ADLVVYNALLSYFC 403
           +Y+ ++   L+PD Y+   +L+ +C S R     +L  G+ +     D  ++  ++    
Sbjct: 334 LYNNMVNGGLMPDKYSVLGVLTGLCESRRIGEAVRLYNGILLNYTGVDAHIHTVIIDGLI 393

Query: 404 KAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAH 463
           KAG  + A++++   L +  + D  S+   +RGL    +  EA N+Y    M    +N +
Sbjct: 394 KAGKFHSAIRIFRRNLLEENSLDVVSYSVAIRGLLLVGRNTEASNLYN--YMKEAGINPN 451

Query: 464 VHTAIVDRL 472
            H      L
Sbjct: 452 GHEGAFSTL 460



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/307 (21%), Positives = 127/307 (41%), Gaps = 53/307 (17%)

Query: 292 TYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV---- 347
           T+  L++ +    M+ + F   D ++  G  P+    NV++D L K+G  D AL +    
Sbjct: 133 TFLLLLRIYWRGGMYDLVFEAFDHMDRYGFTPNTFARNVIMDVLFKVGRADVALKIAQNR 192

Query: 348 ---YDGLLELK--LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALL 399
              + G  + K    P+  T+ +L+     + R S    ++  +E E    DL++YN L+
Sbjct: 193 RSFFFGEKDEKSGCSPNIVTYTTLIKGYIYAQRISDAFDVLSIIESEGPSPDLILYNVLI 252

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
               K    N A+ ++ ++  +   PD Y+F  LL  +C ++++                
Sbjct: 253 DSLAKNERYNDALSIFLSLHKRNILPDCYTFSSLLNTICLSKRL---------------- 296

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
                   ++ +L++              +VE   +D+V+    +  L + G    A  L
Sbjct: 297 -------FLLPKLVDG------------FLVE---VDLVACNSLLSYLGKAGFAALALEL 334

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF- 578
           Y+ M +  + P+ Y+   +L   C+ R I    RL   ++     +D H    +   +  
Sbjct: 335 YNNMVNGGLMPDKYSVLGVLTGLCESRRIGEAVRLYNGILLNYTGVDAHIHTVIIDGLIK 394

Query: 579 --KFHSS 583
             KFHS+
Sbjct: 395 AGKFHSA 401



 Score = 45.8 bits (107), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 46/223 (20%), Positives = 97/223 (43%), Gaps = 13/223 (5%)

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG----- 452
           LL  + + G  +   + ++ M   GFTP+ ++   ++  L    + D A+ + Q      
Sbjct: 137 LLRIYWRGGMYDLVFEAFDHMDRYGFTPNTFARNVIMDVLFKVGRADVALKIAQNRRSFF 196

Query: 453 ----IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
                  +  + N   +T ++   I A R   A  +      E    D++ Y V I  L 
Sbjct: 197 FGEKDEKSGCSPNIVTYTTLIKGYIYAQRISDAFDVLSIIESEGPSPDLILYNVLIDSLA 256

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
           +  R  +A  ++  +    + P+ YT+  +L + C  + + ++ +L+   +   +E+D  
Sbjct: 257 KNERYNDALSIFLSLHKRNILPDCYTFSSLLNTICLSKRLFLLPKLVDGFL---VEVDLV 313

Query: 569 TSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLS 611
               L  ++ K   ++ A+     M N GL+PD+ +  LG+L+
Sbjct: 314 ACNSLLSYLGKAGFAALALELYNNMVNGGLMPDK-YSVLGVLT 355


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 150/569 (26%), Positives = 253/569 (44%), Gaps = 29/569 (5%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
           AL FF W +KQ+ + H+V +++ +   + R   R +    I+      G      T+ + 
Sbjct: 7   ALRFFHWASKQQGFDHNVYTYNRLFEALLRAR-RIDETCHILKNGWPPGITPNVFTYAVV 65

Query: 126 LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP-N 184
           ++   +        E  +EM   G  P+    N V+  L K       +   +  +   N
Sbjct: 66  IQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKN 125

Query: 185 FLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLG 244
            +++ I +  LCK N +         M +KG  PN   + +L+N FCK+ ++  AY LL 
Sbjct: 126 VITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLK 185

Query: 245 LMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
            M   G + +V  ++ +I GF R  ++D A  L+ +MV+NGC PN+VTY +L+ G     
Sbjct: 186 EMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNG 245

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
           +   A+  LD +   G  PD   ++ L+  L K G  D AL V++        PD   + 
Sbjct: 246 LMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYS 305

Query: 365 SLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
           +L++ +C +GR     KL   +     E D+V + AL+   CK     +A ++  TM D+
Sbjct: 306 TLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDR 365

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
             TP+  ++  L+ GLC   ++ +A  V++ +++     N   + +++           A
Sbjct: 366 NCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSA 425

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
           + L           D+++Y   I GL + GR  EA  L+  MK     P+  TY  ++  
Sbjct: 426 LLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGG 485

Query: 542 FCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVE-MCNLGLIP 600
           FCK   I M + L  D++   +  D  T                  + LVE  CN GL+ 
Sbjct: 486 FCKLERIDMARTLFDDMLKQAVLPDVVT-----------------FSTLVEGYCNAGLV- 527

Query: 601 DEMWRKLGLL-----SDETMTPVSLFDGF 624
           D+  R L  +     S +  T  SL DGF
Sbjct: 528 DDAERLLEEMVASDCSPDVYTYTSLVDGF 556



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 127/527 (24%), Positives = 234/527 (44%), Gaps = 9/527 (1%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           K+     +V ++  +I    R T + +T   +  ++   GC+    T+   L    R  +
Sbjct: 188 KESGLAPNVVTYSTVIHGFCRQT-KVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGL 246

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNI 190
                E  DEM   G  P+ F+ + +M  L K G++D+ +KV ++       P+ ++++ 
Sbjct: 247 MDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYST 306

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +  LCK   +     +   M      P+V  F  L++  CK  R+ EA Q+L  M    
Sbjct: 307 LIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN 366

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
            + +V  ++ LIDG  +  ++  A  ++++M+  G  PNVVTY SLI GF        A 
Sbjct: 367 CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSAL 426

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
             ++ + + G  PD++ +N LID L K G   +A  ++  +      PD  T+  L+   
Sbjct: 427 LLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGF 486

Query: 371 CLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           C   R  +   L   +  +A   D+V ++ L+  +C AG  + A +L   M+    +PD 
Sbjct: 487 CKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDV 546

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
           Y++  L+ G C   ++ EA  V + +       N   +TA++D    AG+   A +L   
Sbjct: 547 YTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEE 606

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIA-VPPNAYTYRVMLLSFCKER 546
            +      +V++Y   I G    G  EEA  +  +++       + + YRVM+   C+  
Sbjct: 607 MVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTG 666

Query: 547 NIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEM 593
            +     LL+ +  +     +   + L + + +      A+  L EM
Sbjct: 667 RMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEM 713



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 114/480 (23%), Positives = 210/480 (43%), Gaps = 10/480 (2%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           ++R    D  S+D +++ + + TG+ +    +  + +   C      +   +    +   
Sbjct: 258 RERGLQPDKFSYDTLMAGLCK-TGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGR 316

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNI 190
                + F++M      P+      +MD L K  R+    +VL+  +     PN ++++ 
Sbjct: 317 LDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSS 376

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +  LCK   V + ++V   M+ +G  PNV  +  L++ FC    +  A  L+  M   G
Sbjct: 377 LIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATG 436

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
               +  +  LIDG  +  R   A  L+  M    C+P+V+TY+ LI GF + +   +A 
Sbjct: 437 CLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMAR 496

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
           +  D +  +   PD+V  + L++     G  DDA  + + ++     PD YT+ SL+   
Sbjct: 497 TLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGF 556

Query: 371 CLSGRF---SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           C  GR      + K +     + ++V Y AL+  FC+AG P  A +L   M+  G  P+ 
Sbjct: 557 CKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNV 616

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMN-NPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
            ++  L+ G CG   ++EA  + + +  + N   +   +  ++D L   GR   A++L  
Sbjct: 617 ITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLE 676

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK-HIAVPPNAYTYRVMLLSFCKE 545
                  P     Y   IRGL +G    +A  +  +M       PNA  Y  ++    +E
Sbjct: 677 AIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELARE 736



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/277 (23%), Positives = 119/277 (42%), Gaps = 7/277 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV ++  +I    +L  R +  R +  ++ +   +    TF   +  Y    +       
Sbjct: 475 DVITYSCLIGGFCKLE-RIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERL 533

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
            +EM     +P+ +    ++D   K+GR+    +VLK        PN +++   +   C+
Sbjct: 534 LEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCR 593

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLG-LMITLGTSLSVN 256
               +    ++  MV  G  PNV  +  L+  FC  G + EA ++L  L         + 
Sbjct: 594 AGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMF 653

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL-DM 315
           A+ V++DG  R  R+  A  L E + Q+G  P    Y +LI+G  + K    A   L +M
Sbjct: 654 AYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEM 713

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
             S    P+   +  +I  L++ G +++A  + D LL
Sbjct: 714 TLSRKSRPNAEAYEAVIQELAREGRHEEANALADELL 750



 Score = 43.5 bits (101), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 37/213 (17%), Positives = 89/213 (41%), Gaps = 7/213 (3%)

Query: 78  DYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGM 137
           D   DV ++  ++    ++ GR    R ++  +A+ GC     T+   +  + R     +
Sbjct: 541 DCSPDVYTYTSLVDGFCKV-GRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTV 599

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK-----ETQLPNFLSFNIAL 192
                +EM   G  PN      ++      G ++   K+L+     E    +  ++ + +
Sbjct: 600 AYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMM 659

Query: 193 CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM-ITLGT 251
             LC+   +S   +++  + + G  P   ++  L+   C+   + +A ++L  M ++  +
Sbjct: 660 DGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKS 719

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN 284
             +  A+  +I    R  R + A  L ++++ N
Sbjct: 720 RPNAEAYEAVIQELAREGRHEEANALADELLGN 752


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 156/616 (25%), Positives = 278/616 (45%), Gaps = 16/616 (2%)

Query: 39   TTHQDFPIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTG 98
            T  + F   L   +V   L    +   AL FF W   Q  Y HD  + + ++  + RL  
Sbjct: 800  TALERFTGKLTTTVVGKVLQGVRNGDAALGFFDWATSQEGYNHDTYTCNCLLQALLRLKR 859

Query: 99   RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
              + ++    +L    C     TF + +    R    G   E   EM R G   N    N
Sbjct: 860  PKDALQVYRNKLC---CSPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHN 916

Query: 159  IVMDVLFKIGRVDLGIKVLKETQL-----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
            +V+  L    ++D  +++ KE +      P+  +++  + +L K   V +   ++  MV 
Sbjct: 917  VVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVS 976

Query: 214  KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            KG  PNV  +  LL+  CK G++ EA  LL  M   G S ++  +  +IDG  +L R+D 
Sbjct: 977  KGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDE 1036

Query: 274  AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
            A +L E+MV  GC PNVVTYT L+  F +      A   ++++  +G+ P+L  +N L+D
Sbjct: 1037 AYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLD 1096

Query: 334  CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEA 390
               K    + A  +   +++   VP+  ++ ++++ +C + +     LL + +       
Sbjct: 1097 MFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVP 1156

Query: 391  DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
            D+V +N ++   CK    + A +L+N + + G TP+  ++  L+ GLC +R+ D+A  + 
Sbjct: 1157 DIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLL 1216

Query: 451  QGIVMNNP-AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
            + +      + +   +  ++D L ++ R  +A +LF + + +    D V+Y++ I  L +
Sbjct: 1217 REMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCK 1276

Query: 510  GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
                +EA  +   M      P A TY  ++  FCK  N+     +LQ ++      D  T
Sbjct: 1277 WRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVT 1336

Query: 570  SIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRK--LGLLSDETMT--PVSLFDGFV 625
                  ++ K      A   L  M   GL+PD +     L    D ++T   V LF+   
Sbjct: 1337 FSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMR 1396

Query: 626  PCERRAGNANHLLLNG 641
             C     NA +  L G
Sbjct: 1397 QCGCEPDNATYTTLVG 1412



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 122/506 (24%), Positives = 245/506 (48%), Gaps = 10/506 (1%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D  +++ MI+ +++ + R +    ++ E+   G      ++   L  + +       L  
Sbjct: 229 DSVTYNTMINGLSK-SDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWL 287

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCK 197
            ++M   G  P+  +   V++ L K+ +VD   +V+    +    PN +++   +   C+
Sbjct: 288 LEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCR 347

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
           + D+    +++  M  +G+ PN   +  +++ FC+   +  A+Q+L +MI  G       
Sbjct: 348 VGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAIN 407

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           ++ +I GF +  +L  A  L E+M++ GC P+V   ++LI    +A     A   L M  
Sbjct: 408 YSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSI 467

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
               APD+V +++LI  L K     +A    D +++ +  PD  T+ S++  +C S R +
Sbjct: 468 GMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRIN 527

Query: 378 ---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
              LL   +    V  D+V Y+ ++  FCK    + A K+   M +    PD  ++  L+
Sbjct: 528 DAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALI 587

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            GLC A  +D+A +V+Q ++    A N   +  ++D L +  +  +A ++      +   
Sbjct: 588 NGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCT 647

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
            D ++YT  I GL    R EEA+ +  +MK     P+  TY  +L +  K  N+++V++L
Sbjct: 648 PDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQL 707

Query: 555 LQDVIDARIELDYHTS-IRLTKFIFK 579
           L++ ++A  E  ++ +  RL +F+ +
Sbjct: 708 LKE-MEATEEGQWNANGARLHRFVIR 732



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 130/557 (23%), Positives = 241/557 (43%), Gaps = 36/557 (6%)

Query: 48  LAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIV 107
           L+P IV   L        AL FF W   +  Y H++   + +++V+ +   ++     + 
Sbjct: 91  LSPEIVGKVLQRLIDPGAALVFFEWAETRDGYQHEIFCCNCLLNVLVK-AHQYSQAHDLF 149

Query: 108 GELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKI 167
                        T+   +  + R        E FDEM R G   +      ++  L   
Sbjct: 150 RSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDA 209

Query: 168 GRVD---LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFE 224
           G+     L  + + +T  P+ +++N  +  L K + + +   ++  MV  GF PNV  + 
Sbjct: 210 GQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYN 269

Query: 225 ILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN 284
            +L+ FCK  R+  A  LL  M+T G    V ++T +I+G  +L ++D A  + +KM+Q 
Sbjct: 270 TVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQR 329

Query: 285 GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
           GC PNV+TY +L+ GF        A   +  +   G+ P+ + +N ++    +    + A
Sbjct: 330 GCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERA 389

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCK 404
             V   +++    PD+  + +++S                                 FCK
Sbjct: 390 HQVLQMMIQTGCPPDAINYSTIISG--------------------------------FCK 417

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV 464
           AG   +A  L   M+ +G  PD      L+  LC A  ID A  + +  +  + A +   
Sbjct: 418 AGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVA 477

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
           ++ ++  L +A R  +A       +  +   DVV+Y   + GL +  R  +A++L+ +M+
Sbjct: 478 YSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMR 537

Query: 525 HIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSS 584
              V P+  TY +++ SFCK+ N+    ++L+ + +A+   D  T   L   + K  +  
Sbjct: 538 AAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVD 597

Query: 585 SAVNQLVEMCNLGLIPD 601
            A +   EM   G  P+
Sbjct: 598 KAFDVFQEMLGCGCAPN 614



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 101/408 (24%), Positives = 179/408 (43%), Gaps = 52/408 (12%)

Query: 82   DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
            D+ +F+ +I  + + T R +    +   +   GC     T+   +    +   +      
Sbjct: 1157 DIVTFNTIIDAMCK-TYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYL 1215

Query: 142  FDEMGRF-GFTPNTFARNIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLC 196
              EM R  G +P+    N V+D L K  RVD    L +++L +   P+ ++++I + +LC
Sbjct: 1216 LREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLC 1275

Query: 197  KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
            K   +    +V+ +M++ GF P    +  L++ FCK G + +A ++L L+++ G+   V 
Sbjct: 1276 KWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVV 1335

Query: 257  AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
             +++ ID   +  RL  AG L E M++ G  P+ VTY +L+KGF +A +   A    +++
Sbjct: 1336 TFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVM 1395

Query: 317  ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
               G  PD   +  L+  L    SY D L      +   +V   +     LS+       
Sbjct: 1396 RQCGCEPDNATYTTLVGHLVDKKSYKDLL----AEVSKSMVDTGFKLNHELSS------- 1444

Query: 377  SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK--------------- 421
                KL   +EVEAD+ +  A++  F K G P  A K++  M  +               
Sbjct: 1445 ----KLEASIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGMDQRNVVLWSAMLGVYVFH 1500

Query: 422  ----------------GFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
                            G  PD  +F+ LL   C A  +D A++ +  I
Sbjct: 1501 KQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSI 1548


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 150/623 (24%), Positives = 277/623 (44%), Gaps = 27/623 (4%)

Query: 9   LFYTAQRTQILKTIISFKSIHQISSPKVCATTHQDFPIILAPHIVHSTLLNCPSDLIALS 68
           +FY     + L+ + S +   +++S ++C     +F   L P +V   L        A+ 
Sbjct: 64  IFYAQAAKEFLRVLDSSEDF-ELASRRLC-----EFGGYLVPSVVGRVLQQLDDLDKAVK 117

Query: 69  FFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVG-CVIKAQTFLLFLR 127
           FF WC  Q  Y H   + + ++S   R     E          R G C   + T+   + 
Sbjct: 118 FFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNH--RCGLCSPDSITYSTLIN 175

Query: 128 IYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ---LPN 184
            + +   +       DEM + G  P+    N ++  L   GRVD  +   ++ Q    P+
Sbjct: 176 GFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRNCAPS 235

Query: 185 FLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLG 244
            +++ I +  LCK   +S+   ++  M+  G  PNV  +  L+N FCK+G + EA  L  
Sbjct: 236 VITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFN 295

Query: 245 LMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
            M+    S  V  + +LIDG+ +  R      L ++MV+ GC PN +TY +L+   +++ 
Sbjct: 296 QMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSG 355

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
            +  AF+   M+      P     N++ID   K+G  D A +++  + +   +PD YT+ 
Sbjct: 356 KYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYN 415

Query: 365 SLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
            ++S  C + R     +L+  +       D+V YN+++S  CKA   ++A ++Y  + + 
Sbjct: 416 IMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNG 475

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
           G+  D  +   L+ GLC +R++D+A  + + +  N  A +   +T ++    +A +  K+
Sbjct: 476 GYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKS 535

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
           +  F   + +     V++Y++ I  L +  R  +  +L   M    V P+A  Y  ++  
Sbjct: 536 LAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDG 595

Query: 542 FCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            CK  +      L + +          T   L   + K      A++ L  M + G +PD
Sbjct: 596 LCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPD 655

Query: 602 EMWRKLGLLSDETMTPVSLFDGF 624
                       T+T  S+FDGF
Sbjct: 656 ------------TVTYNSVFDGF 666



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/422 (25%), Positives = 198/422 (46%), Gaps = 7/422 (1%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCK 197
            ++M   G  PN    N +++   K+G +D  +    ++L+ +  P+  ++NI +   CK
Sbjct: 259 LEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCK 318

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
                +   ++  MV+ G  PN   +  L++   K G+  +A+ L  +M+      S   
Sbjct: 319 QERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFT 378

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           + ++ID F ++ +LD+A  L++ M   GC P++ TY  +I G   A     A   L+ + 
Sbjct: 379 FNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMT 438

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G  PD+V +N ++  L K    D+A +VY+ L       D  T  +L+  +C S R  
Sbjct: 439 EAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLD 498

Query: 378 LLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
              KL+  +E      D+V Y  L+  FCKA   ++++  ++ MLDKG  P   ++  ++
Sbjct: 499 DAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVI 558

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
             LC + ++ +   + + ++      +A V+T+++D L ++    +A +L++        
Sbjct: 559 DKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCA 618

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
             VV+Y V +  L +  R +EA  L   M+     P+  TY  +   F K        RL
Sbjct: 619 PTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRL 678

Query: 555 LQ 556
            Q
Sbjct: 679 FQ 680



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 93/391 (23%), Positives = 188/391 (48%), Gaps = 7/391 (1%)

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           ++ E+ + GC     T+   +    +   Y         M R    P+ F  N+++D+  
Sbjct: 328 LLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFC 387

Query: 166 KIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
           K+G++DL  ++ +       LP+  ++NI +   C+ N + + + ++  M   G  P+V 
Sbjct: 388 KVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVV 447

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            +  +++  CK  ++ EAY++  ++   G  L V   + LIDG  + RRLD A  L  +M
Sbjct: 448 TYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREM 507

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
            +NG +P+VV YT LI GF +A     + +F   +  +G  P ++ ++++ID L K    
Sbjct: 508 ERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARV 567

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNAL 398
            D   +   +LE  + PD+  + S++  +C S  +     L KL+        +V YN L
Sbjct: 568 RDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVL 627

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           +   CK    ++A+ L   M   G  PD  ++  +  G   + + D+A  ++Q +     
Sbjct: 628 VDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGC 687

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
           +    +++ ++ +L+   +  +A++++  A+
Sbjct: 688 SPTPFMYSLLLTKLVAEEKMDQAMEIWEEAL 718



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 110/214 (51%), Gaps = 4/214 (1%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLN 199
           EM R G  P+  A  I++    K  ++D  +    ++L +  +P  ++++I +  LCK  
Sbjct: 506 EMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSA 565

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
            V +   ++  M+ +G  P+  ++  +++  CK     EAY+L  LM   G + +V  + 
Sbjct: 566 RVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYN 625

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
           VL+D   ++ RLD A +L E M  +GC P+ VTY S+  GF ++     AF     ++S 
Sbjct: 626 VLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSR 685

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE 353
           G +P    +++L+  L      D A+++++  LE
Sbjct: 686 GCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALE 719



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/246 (19%), Positives = 97/246 (39%), Gaps = 40/246 (16%)

Query: 79  YFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMV 138
           YF DV +   +I  + + + R +    ++ E+ R G       + + +  + + +     
Sbjct: 477 YFLDVVTCSTLIDGLCK-SRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKS 535

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI------------------------ 174
           L  F EM   G  P     +IV+D L K  RV  G                         
Sbjct: 536 LAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDG 595

Query: 175 --------------KVLKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN 219
                         K++K+T   P  +++N+ +  LCK++ +     ++ +M   G  P+
Sbjct: 596 LCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPD 655

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
              +  + + F K     +A++L   M + G S +   +++L+       ++D A  +WE
Sbjct: 656 TVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWE 715

Query: 280 KMVQNG 285
           + ++ G
Sbjct: 716 EALEAG 721


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/521 (24%), Positives = 248/521 (47%), Gaps = 9/521 (1%)

Query: 44  FPIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETV 103
            P    P  +  TL     ++ AL  F W +KQ ++      ++ ++  + +  G FE +
Sbjct: 58  LPPDFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGK-AGSFEYM 116

Query: 104 RGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEM-GRFGFTPNTFARNIVMD 162
           R ++ E+   GC      FL+F+  Y + E+Y  V+     M   +   P+T   N++++
Sbjct: 117 RRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLN 176

Query: 163 VLFKIGRVDL----GIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYP 218
           VL    ++ L       +++     +  +FNI +  LCK + V     ++  M   G  P
Sbjct: 177 VLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSP 236

Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
           +   F  ++  + + G +  A ++   M+  G   +     VLI+GF +  R+D A    
Sbjct: 237 DETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFI 296

Query: 279 EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
           ++ V  G  P+  TY +L+ G  +      A   +D +   G  PD+  +N LI  L K+
Sbjct: 297 QEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKL 356

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF---SLLPKLVCGLEVEADLVVY 395
           G  ++A+ + D ++     P++ T+ +++S++C   R    + + +L+    +  D+  +
Sbjct: 357 GEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTF 416

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
           N+L+   C +     A+ L+  M  KG  PD +++  L+  LC +RK++EA+N+ + + +
Sbjct: 417 NSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMEL 476

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
           N  A N  ++  ++D   +  R  +A ++F    ++    D V+Y   I GL +  R E+
Sbjct: 477 NGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVED 536

Query: 516 AYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
           A  L  QM    + P+ +TY  +L  FCK  +IK    ++Q
Sbjct: 537 AAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQ 577



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 111/421 (26%), Positives = 194/421 (46%), Gaps = 7/421 (1%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G  +    I  ++   GC     T  + +  + +       L    E    GF P+ F  
Sbjct: 252 GNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTY 311

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N +++ L KIG     ++V+    L    P+  ++N  +  LCKL ++     ++  MV 
Sbjct: 312 NTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVS 371

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +   PN   +  +++  CK  R+ EA ++  L+ + G    V  +  LI G         
Sbjct: 372 RDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKS 431

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L+E+M   GC P+  TY  LI     ++    A + L  +E  G A ++V +N LID
Sbjct: 432 AMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLID 491

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA--- 390
              K    ++A +++D +    +  DS T+ +L+  +C S R     +L+  + +E    
Sbjct: 492 GFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRP 551

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           D   YN+LL++FCK G   +A  +  TM   G  PD  ++  L+ GLC A ++  A  + 
Sbjct: 552 DKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLL 611

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
           + I M    +  H +  ++  L +  R H+A++LFR  + +  P D ++Y +  RGL  G
Sbjct: 612 RSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNG 671

Query: 511 G 511
           G
Sbjct: 672 G 672



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 112/478 (23%), Positives = 219/478 (45%), Gaps = 14/478 (2%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
           +R   HDV +F+ +I  + +   +      ++ E+   G      TF   ++ Y  G   
Sbjct: 196 RRRIRHDVSTFNILIKALCK-AHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNL 254

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIA 191
              L   ++M  +G        N++++   K GR+D  +  ++E       P+  ++N  
Sbjct: 255 DGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTL 314

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           +  LCK+    +  +V+  M+  G  P++  +  L++  CK+G I EA ++L  M++   
Sbjct: 315 VNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDC 374

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
           S +   +  +I    +  R+D A  +   +   G  P+V T+ SLI+G   +     A  
Sbjct: 375 SPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMD 434

Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL---VPDSYTFCSLLS 368
             + ++ +G  PD   +N+LID L      ++AL++   L E++L     +   + +L+ 
Sbjct: 435 LFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNL---LKEMELNGCARNVVIYNTLID 491

Query: 369 TVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
             C + R     ++   +E++    D V YN L+   CK+     A +L + M+ +G  P
Sbjct: 492 GFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRP 551

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           D +++  LL   C    I +A ++ Q +  +    +   +  ++  L +AGR   A +L 
Sbjct: 552 DKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLL 611

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           R   ++   L   +Y   I+ L +  RT EA  L+ +M   + PP+A TY+++    C
Sbjct: 612 RSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLC 669



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 151/349 (43%), Gaps = 46/349 (13%)

Query: 136 GMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSF 188
           G + EA    D+M     +PN    N ++  L K  RVD   ++ +    +  LP+  +F
Sbjct: 357 GEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTF 416

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           N  +  LC  ++  +  D+   M  KG  P+   + +L++  C   ++ EA  LL  M  
Sbjct: 417 NSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMEL 476

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
            G + +V  +  LIDGF + +R++ A  ++++M   G S + VTY +LI G  ++K    
Sbjct: 477 NGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVED 536

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A   +D +  EG  PD   +N L+    K G    A D+   +      PD  T+ +L+S
Sbjct: 537 AAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLIS 596

Query: 369 TVCLSGRFSLLPKLVCGLEVEA-------------------------------------- 390
            +C +GR  +  +L+  ++++                                       
Sbjct: 597 GLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPP 656

Query: 391 DLVVYNALLSYFCKAGFP-NQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
           D + Y  +    C  G P  +AV     M+++G  P+  SFV L  GLC
Sbjct: 657 DAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLC 705



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/345 (21%), Positives = 148/345 (42%), Gaps = 10/345 (2%)

Query: 268 LRRLDMAGY------LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH 321
           LR+L  AG       + E+M  +GC  +   +   ++ + + +++      + ++E E  
Sbjct: 104 LRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYR 163

Query: 322 -APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS--- 377
             PD  F+NVL++ L            +  ++  ++  D  TF  L+  +C + +     
Sbjct: 164 IKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAI 223

Query: 378 LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
           L+ + +    +  D   +  ++  + + G  + A+++   M++ G    + +   L+ G 
Sbjct: 224 LMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGF 283

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
           C   +ID+A++  Q  V      +   +  +V+ L + G    A+++    ++     D+
Sbjct: 284 CKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDI 343

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
            +Y   I GL + G  EEA  +  QM      PNA TY  ++ S CKE  +     + + 
Sbjct: 344 YTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARL 403

Query: 558 VIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
           +    I  D  T   L + +    +  SA++   EM   G  PDE
Sbjct: 404 LTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDE 448


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 147/558 (26%), Positives = 258/558 (46%), Gaps = 48/558 (8%)

Query: 48  LAPHIV-HSTLLN--CPSDLIALSFFIWCA-KQRDYFHDVQSFDHMISVVTRLTGRFETV 103
           +AP IV ++T++N  C S+ +     ++    +R +  DV +++ +I  + +  G  E  
Sbjct: 212 VAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCK-AGDLEEA 270

Query: 104 RGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFG--FTPNTFARNIVM 161
           R + G+++   CV    T+ + +    +        E   EM R      PN    N  +
Sbjct: 271 RRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFL 330

Query: 162 DVLFKIGRVDLGIKVLKETQ------LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG 215
           D L K        ++++  +       P+ ++F+  +  LCK   +     V   M+  G
Sbjct: 331 DGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGG 390

Query: 216 FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAG 275
           + PNV  +  L+N  CK  ++  A+ ++  M+  G +  V  ++VL+D F +  R+D A 
Sbjct: 391 YVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEAL 450

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS-FLDMLESEGHAPDLVFHNVLID- 333
            L   M   GC+PNVVT+ S+I G  ++     AF  F DM    G  PD + +  LID 
Sbjct: 451 ELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDG 510

Query: 334 --------------------------C----LSKMGSYDDALDVYDGLLELKLVPDSYTF 363
                                     C    LSK+G    AL VY+ +LEL+LVPD  TF
Sbjct: 511 LFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTF 570

Query: 364 CSLLSTVCLSGRF---SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
             L++  C +G F   S L + +    ++ D++ + AL+   CKAG    A  + + M +
Sbjct: 571 NILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGN 630

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
            G  P+  ++  L+ GLC + +I+EA    + +V +    ++  + ++V  L  A R   
Sbjct: 631 LGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDD 690

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
           A+QL        +  D V+Y + + GL + G+TE+A  +  +M      P+  TY  ++ 
Sbjct: 691 ALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLID 750

Query: 541 SFCKERNIKMVKRLLQDV 558
           S CK  +++  +RL  D+
Sbjct: 751 SLCKAGDLEEARRLHGDM 768



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 129/525 (24%), Positives = 239/525 (45%), Gaps = 19/525 (3%)

Query: 92  VVTRLTGRFETVRGIV---GELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRF 148
           V+  L    ET R +    GE+AR G      T+   +    +    G  +E F+E+   
Sbjct: 186 VLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVER 245

Query: 149 GFTPNTFARNIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNV 204
           G  P+    N ++D L K G ++    L   +   + +PN +++++ +  LCK+  +   
Sbjct: 246 GHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEA 305

Query: 205 KDVIGMMVRKG--FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI--TLGTSLSVNAWTV 260
           +++I  M RK     PN+  +   L+  CK    AEA +L+  +   +L  S     ++ 
Sbjct: 306 RELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFST 365

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           LIDG  +  ++D A  +++ M+  G  PNV+TY +L+ G  +A     A + ++ +  +G
Sbjct: 366 LIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKG 425

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----F 376
             PD++ ++VL+D   K    D+AL++  G+      P+  TF S++  +C S R    F
Sbjct: 426 VTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAF 485

Query: 377 SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
            +   +     +  D + Y  L+    + G   QA  L + M D    PD Y+F   + G
Sbjct: 486 QMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPD----PDTYAFNCCING 541

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
           L     +  A+ VY  ++      +      ++    +AG   +A  LF   + +    D
Sbjct: 542 LSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPD 601

Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
           V+++   I GL + G+ E A  +   M ++ VPPN  TY  ++   CK   I+   + L+
Sbjct: 602 VMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLE 661

Query: 557 DVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           +++ +    D  T   L   + +   +  A+  + E+ + G  PD
Sbjct: 662 EMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPD 706



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 137/532 (25%), Positives = 237/532 (44%), Gaps = 14/532 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV ++  ++    + + R +    ++  +A  GC     TF   +    + +  G   + 
Sbjct: 429 DVITYSVLVDAFCKAS-RVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQM 487

Query: 142 FDEMG-RFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLND 200
           FD+M  + G  P+      ++D LF+ GR      +L     P+  +FN  +  L KL D
Sbjct: 488 FDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLGD 547

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
           VS    V   M+     P+   F IL+   CK G   +A  L   M+       V  +  
Sbjct: 548 VSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGA 607

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           LIDG  +  +++ A  + + M   G  PNVVTY +L+ G  ++     A  FL+ + S G
Sbjct: 608 LIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSG 667

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----F 376
             PD + +  L+  L +    DDAL +   L      PD+ T+  L+  +  SG+     
Sbjct: 668 CVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAI 727

Query: 377 SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM---LDKGFTPDNYSFVGL 433
           ++L ++V G     D+V YN L+   CKAG   +A +L+  M   + +   P+  ++  L
Sbjct: 728 TVLEEMV-GKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVL 786

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAV--NAHVHTAIVDRLIEAGRCHKAIQLFR--RAI 489
           + GLC   +IDEA  + Q ++  +  V  N   + + +D L +     +A +L R  R  
Sbjct: 787 INGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDG 846

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
             +   D V+++  I GL + G+T+EA  ++  M      PN  TY V++   CK   ++
Sbjct: 847 SLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKME 906

Query: 550 MVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
               +++ ++D  +  D  T   L     K      A+  L  M + G  P+
Sbjct: 907 RAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPN 958



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 122/494 (24%), Positives = 224/494 (45%), Gaps = 74/494 (14%)

Query: 97   TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
            +GR E     + E+   GCV  + T+   +    R       L+   E+  FG+ P+T  
Sbjct: 650  SGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVT 709

Query: 157  RNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
             NI++D L+K G+ +  I VL+E                               MV KG 
Sbjct: 710  YNILVDGLWKSGQTEQAITVLEE-------------------------------MVGKGH 738

Query: 217  YPNVRMFEILLNCFCKMGRIAEAYQLLGLM---ITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            +P+V  +  L++  CK G + EA +L G M   ++     +V  ++VLI+G  ++ R+D 
Sbjct: 739  HPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDE 798

Query: 274  AGYLWEKMVQNGCS--PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH---APDLVFH 328
            A  L ++M++  C   PN++TY S + G  +  M + A   +  L  +G    +PD V  
Sbjct: 799  ARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLR-DGSLRVSPDTVTF 857

Query: 329  NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL-- 386
            + LID L K G  D+A +V+D ++    VP+  T+  L++ +C + +      ++  +  
Sbjct: 858  STLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVD 917

Query: 387  -EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
              V  D++ Y+ L+  FCKA   ++A++L + M  +G TP+  +F  ++ GLC + +  E
Sbjct: 918  KGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGE 977

Query: 446  AINVYQGIVMNNP-AVNAHVHTAIVDRLIEAGRCHKAIQLF------------------- 485
            A  ++  + + +  A +   +  ++D L   G   +A  L                    
Sbjct: 978  AFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLS 1037

Query: 486  -----RRAI-----VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
                  RA+     +E  P D V++ + I G  + G  E+A  L+ +M    + P+  T+
Sbjct: 1038 KLGDVSRALHRMLELELVP-DKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTF 1096

Query: 536  RVMLLSFCKERNIK 549
              ++   CK   ++
Sbjct: 1097 GALIDGLCKAGQVE 1110



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 179/385 (46%), Gaps = 17/385 (4%)

Query: 77   RDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELA-RVG--CVIKAQTFLLFLRIYWRGE 133
            + +  DV +++ +I  + +  G  E  R + G+++ RV   CV    T+ + +    +  
Sbjct: 736  KGHHPDVVTYNTLIDSLCK-AGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVG 794

Query: 134  MYGMVLEAFDEMGRFG--FTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ------LPNF 185
                  E   EM R      PN    N  +D L K   +    ++++  +       P+ 
Sbjct: 795  RIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDT 854

Query: 186  LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGL 245
            ++F+  +  LCK        +V   M+  G+ PNV  + +L+N  CK  ++  A+ ++  
Sbjct: 855  VTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIES 914

Query: 246  MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
            M+  G +  V  ++VL+D F +   +D A  L   M   GC+PNVVT+ S+I G  ++  
Sbjct: 915  MVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQ 974

Query: 306  FSIAFS-FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
               AF  F DM    G APD + +  LID L + G    A  + D + +    PD+Y F 
Sbjct: 975  SGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPD----PDTYAFN 1030

Query: 365  SLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
              ++ +   G  S     +  LE+  D V +N L++  CKAG   QA  L+  M+ K   
Sbjct: 1031 CCINGLSKLGDVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQ 1090

Query: 425  PDNYSFVGLLRGLCGARKIDEAINV 449
            PD  +F  L+ GLC A +++   ++
Sbjct: 1091 PDVMTFGALIDGLCKAGQVEATWDI 1115



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 95/395 (24%), Positives = 168/395 (42%), Gaps = 54/395 (13%)

Query: 286 CSPNVVTYTSLIKGFMEAK---MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
           C PN  TY++L++   +A      ++ F F  +  S     D   +N+++  L + G   
Sbjct: 142 CRPNHFTYSTLLRATYKAGGDVERTLGF-FRRIRSSSRSVAD---YNIVLQSLCRAGETA 197

Query: 343 DALDVYDGLLELK-LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV---------EADL 392
            AL+++ G +    + P   T+ ++++ +C S       +L  G+E+           D+
Sbjct: 198 RALEIFRGEMARDGVAPTIVTYNTIINGLCKSN------ELGAGMELFEELVERGHHPDV 251

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           V YN L+   CKAG   +A +L+  M  +   P+  ++  L+ GLC   +IDEA  + Q 
Sbjct: 252 VTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQE 311

Query: 453 IVMNNPAV--NAHVHTAIVDRLIEAGRCHKAIQLFR--RAIVEKYPLDVVSYTVAIRGLL 508
           +   +  V  N   + + +D L +     +A +L R  R    +   D V+++  I GL 
Sbjct: 312 MTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLC 371

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
           + G+ +EA  ++  M      PN  TY  ++   CK   ++    +++ ++D  +  D  
Sbjct: 372 KCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVI 431

Query: 569 TSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP-------------------------DEM 603
           T   L     K      A+  L  M + G  P                         D+M
Sbjct: 432 TYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDM 491

Query: 604 WRKLGLLSDETMTPVSLFDGFVPCERRAGNANHLL 638
             K GL+ D+ +T  +L DG      RAG A  LL
Sbjct: 492 ALKHGLVPDK-ITYCTLIDGLFR-TGRAGQAEALL 524



 Score = 52.0 bits (123), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 58/120 (48%), Gaps = 9/120 (7%)

Query: 125  FLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-P 183
              R  W G+   ++L+A  +       P+T+A N  ++ L K+G V   +  + E +L P
Sbjct: 1005 LFRTGWAGQAE-VLLDAMPD-------PDTYAFNCCINGLSKLGDVSRALHRMLELELVP 1056

Query: 184  NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
            + ++FNI +   CK  +      +   MV K   P+V  F  L++  CK G++   + ++
Sbjct: 1057 DKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATWDIM 1116


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 126/469 (26%), Positives = 222/469 (47%), Gaps = 10/469 (2%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALC 193
            LE   EM      P+ F  NI++D L K  + D   ++L E       P+ ++FN  + 
Sbjct: 245 ALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMD 304

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
            LCK         ++ +M  +   P+   +  L++  CK   +  A  L+   ++ G   
Sbjct: 305 GLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVP 364

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
            V  +++L DG  +  R+D A  L ++M   GC+PN+VTY +LI G  +A     A+  L
Sbjct: 365 DVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELL 424

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           + L S G  PD+V + +++D L K G  D AL + +G+L+    P   T+ +L+  +C +
Sbjct: 425 ESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRT 484

Query: 374 GRFSL---LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           GR      + K +   +  AD + Y +L++ +CK+    +A K+ + +  +G TP    +
Sbjct: 485 GRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI--RG-TPYIDVY 541

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             L+ G C   ++DE  NV++ +       N   +  ++D L + G+  +A         
Sbjct: 542 NALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHS 601

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
                DVVSY + I GL +  + +EA  +  QM    +PP+A TY  ++  FCKE     
Sbjct: 602 AGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDD 661

Query: 551 VKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLI 599
              +L+++I A ++ D  T   L   + + +    A   + EM   G +
Sbjct: 662 AVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCV 710



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 116/499 (23%), Positives = 229/499 (45%), Gaps = 14/499 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D  +F+ ++  + +  G+FE    ++  +A   C     T+   +    + +      + 
Sbjct: 295 DTVTFNSIMDGLCK-AGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDL 353

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
            DE    GF P+    +I+ D L K GR+D   +++KE       PN +++N  +  LCK
Sbjct: 354 VDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCK 413

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            +      +++  +V  GF P+V  + I+++  CK GR+ +A +++  M+  G + SV  
Sbjct: 414 ASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVIT 473

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T L++G  R  R+D A +++++MV   C+ + + Y SL+ G+ ++     A   +D + 
Sbjct: 474 YTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIR 533

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-- 375
                P +  +N L+D   K G  D+  +V++ +     VP+  T+  ++  +C  G+  
Sbjct: 534 G---TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVD 590

Query: 376 --FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
             F  L  +     V  D+V YN ++    KA  P +A ++ + M+  G  PD  ++  L
Sbjct: 591 EAFPFLESMHSAGCV-PDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTL 649

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           +   C   + D+A+ + + ++      +   +  ++  L +  R   A +L    +    
Sbjct: 650 MAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGC 709

Query: 494 PLDV-VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVK 552
            +    +Y   I  L + G  ++A +L   M    V  N  TY + +   CKE  +    
Sbjct: 710 VVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEAS 769

Query: 553 RLLQDVIDARIELDYHTSI 571
            LL ++   R E+ Y T I
Sbjct: 770 SLLSEMDTLRDEVSYTTVI 788



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 110/475 (23%), Positives = 212/475 (44%), Gaps = 9/475 (1%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR +    +V  + + GC     T+   +    R          F EM     T +  A 
Sbjct: 450 GRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAY 509

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQ-LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
             +++   K  R     KV+   +  P    +N  +   CK   +  + +V   M  +G 
Sbjct: 510 VSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGC 569

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
            PN++ + I+++  CK G++ EA+  L  M + G    V ++ ++IDG  +  +   A  
Sbjct: 570 VPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQ 629

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           + ++M+Q G  P+ VTY +L+  F + + F  A   L  +   G  PD V +N LI  LS
Sbjct: 630 VLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLS 689

Query: 337 KMGSYDDALDVYDGLLELK-LVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADL 392
           +     DA ++   +L    +V    T+ +++  +C  G      LL   + G  VEA+ 
Sbjct: 690 QTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANT 749

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           V YN  +   CK G  ++A  L + M       D  S+  ++ GLC A ++D A  + + 
Sbjct: 750 VTYNIFIDRLCKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLARE 806

Query: 453 IV-MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
           +V +    + +H    ++D   +  R  +A+ L    +       V++Y + I  L +  
Sbjct: 807 MVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLD 866

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           + ++A+ L+ +M    +  ++ +Y V++   C +   K   ++L+++  +  E+D
Sbjct: 867 KVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEID 921



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 110/433 (25%), Positives = 186/433 (42%), Gaps = 9/433 (2%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           TGR +    I  E+    C   A  ++  +  Y +        +  D  G  G TP    
Sbjct: 484 TGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVD--GIRG-TPYIDV 540

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N +MD   K GR+D    V ++      +PN  ++NI +  LCK   V      +  M 
Sbjct: 541 YNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMH 600

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
             G  P+V  + I+++   K  +  EA Q+L  MI  G       +  L+  F +  R D
Sbjct: 601 SAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFD 660

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL-DMLESEGHAPDLVFHNVL 331
            A  + + M++ G  P+ VTY +LI G  +      A+  + +ML +         +N +
Sbjct: 661 DAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTI 720

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEAD 391
           ID L K G    AL + D +    +  ++ T+   +  +C  GR      L+  ++   D
Sbjct: 721 IDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRD 780

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLD-KGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
            V Y  ++   CKA   ++A KL   M+  KG    +++F  L+      +++DEA+ + 
Sbjct: 781 EVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLL 840

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
             +V    + +   +  ++  L +  +  KA +LF    V       VSYTV I GL   
Sbjct: 841 GLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQ 900

Query: 511 GRTEEAYILYSQM 523
           GR +EA  +  +M
Sbjct: 901 GRGKEALQVLEEM 913



 Score = 43.9 bits (102), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 8/114 (7%)

Query: 150 FTPNTFARNIVMDVLFKIGRVD-----LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNV 204
            T +TF  N+++D   K  R+D     LG+ V +    P+ +++N+ +  LCKL+ V   
Sbjct: 815 ITSHTF--NLLIDAFTKTKRLDEALTLLGLMVQRGCS-PSVITYNMVITCLCKLDKVDKA 871

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
            ++   M  +G   +   + +L+   C  GR  EA Q+L  M +    +    W
Sbjct: 872 WELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKW 925


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 124/462 (26%), Positives = 220/462 (47%), Gaps = 10/462 (2%)

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLND 200
           M      P+ F  NI++D L K  + D   ++L E       P+ ++FN  +  LCK   
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
                 ++ +M  +   P+   +  L++  CK   +  A  L+   ++ G    V  +++
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           L DG  +  R+D A  L ++M  NGC+PN+VTY +LI G  +A     A+  L+ L S G
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL-- 378
             PD+V + +++D L K G  D AL + +G+L+    P   T+ +L+  +C +GR     
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 240

Query: 379 -LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
            + K +   +  AD + Y +L++ +CK+    +A K+ + +  +G TP    +  L+ G 
Sbjct: 241 HIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI--RG-TPYIDVYNALMDGY 297

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
           C   ++DE  NV++ +       N   +  ++D L + G+  +A              DV
Sbjct: 298 CKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDV 357

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
           VSY + I GL +  + +EA  +  QM    +PP+A TY  ++  FCKE        +L++
Sbjct: 358 VSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKN 417

Query: 558 VIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLI 599
           +I A ++ D  T   L   + + +    A   + EM   G +
Sbjct: 418 MIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCV 459



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 117/505 (23%), Positives = 229/505 (45%), Gaps = 14/505 (2%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
            R    D  +F+ ++  + +  G+FE    ++  +A   C     T+   +    + +  
Sbjct: 38  DRGVTPDTVTFNSIMDGLCK-AGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNV 96

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIA 191
                  DE    GF P+    +I+ D L K GR+D   +++KE       PN +++N  
Sbjct: 97  DRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTL 156

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           +  LCK +      +++  +V  GF P+V  + I+++  CK GR+ +A +++  M+  G 
Sbjct: 157 IDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGC 216

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
           + SV  +T L++G  R  R+D A +++++MV   C+ + + Y SL+ G+ ++     A  
Sbjct: 217 TPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQK 276

Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
            +D +      P +  +N L+D   K G  D+  +V++ +     VP+  T+  ++  +C
Sbjct: 277 VVDGIRG---TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLC 333

Query: 372 LSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
             G+    F  L  +     V  D+V YN ++    KA  P +A ++ + M+  G  PD 
Sbjct: 334 KHGKVDEAFPFLESMHSAGCV-PDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDA 392

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
            ++  L+   C   + D+A+ + + ++      +   +  ++  L +  R   A +L   
Sbjct: 393 VTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHE 452

Query: 488 AIVEKYPLDV-VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
            +     +    +Y   I  L + G  ++A +L   M    V  N  TY + +   CKE 
Sbjct: 453 MLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEG 512

Query: 547 NIKMVKRLLQDVIDARIELDYHTSI 571
            +     LL ++   R E+ Y T I
Sbjct: 513 RLDEASSLLSEMDTLRDEVSYTTVI 537



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 114/478 (23%), Positives = 216/478 (45%), Gaps = 15/478 (3%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA---FDEMGRFGFTPNT 154
           GR +    +V  + + GC     T+   +    R    G V EA   F EM     T + 
Sbjct: 199 GRLDKALKMVEGMLKRGCTPSVITYTALMEGLCR---TGRVDEAHHIFKEMVSKDCTADA 255

Query: 155 FARNIVMDVLFKIGRVDLGIKVLKETQ-LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
            A   +++   K  R     KV+   +  P    +N  +   CK   +  + +V   M  
Sbjct: 256 LAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMAC 315

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +G  PN++ + I+++  CK G++ EA+  L  M + G    V ++ ++IDG  +  +   
Sbjct: 316 RGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKE 375

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  + ++M+Q G  P+ VTY +L+  F + + F  A   L  +   G  PD V +N LI 
Sbjct: 376 ARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLIS 435

Query: 334 CLSKMGSYDDALDVYDGLLELK-LVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVE 389
            LS+     DA ++   +L    +V    T+ +++  +C  G      LL   + G  VE
Sbjct: 436 GLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVE 495

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
           A+ V YN  +   CK G  ++A  L + M       D  S+  ++ GLC A ++D A  +
Sbjct: 496 ANTVTYNIFIDRLCKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKL 552

Query: 450 YQGIV-MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
            + +V +    + +H    ++D   +  R  +A+ L    +       V++Y + I  L 
Sbjct: 553 AREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLC 612

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           +  + ++A+ L+ +M    +  ++ +Y V++   C +   K   ++L+++  +  E+D
Sbjct: 613 KLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEID 670



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 110/433 (25%), Positives = 187/433 (43%), Gaps = 9/433 (2%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           TGR +    I  E+    C   A  ++  +  Y +        +  D  G  G TP    
Sbjct: 233 TGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVD--GIRG-TPYIDV 289

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N +MD   K GR+D    V ++      +PN  ++NI +  LCK   V      +  M 
Sbjct: 290 YNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMH 349

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
             G  P+V  + I+++   K  +  EA Q+L  MI  G       +  L+  F +  R D
Sbjct: 350 SAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFD 409

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL-DMLESEGHAPDLVFHNVL 331
            A  + + M++ G  P+ VTY +LI G  +      A+  + +ML +         +N +
Sbjct: 410 DAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTI 469

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEAD 391
           ID L K G    AL + D +    +  ++ T+   +  +C  GR      L+  ++   D
Sbjct: 470 IDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRD 529

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLD-KGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
            V Y  ++   CKA   ++A KL   M+  KG    +++F  L+      +++DEA+ + 
Sbjct: 530 EVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLL 589

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
           + +V    + +   +  ++  L +  +  KA +LF    V       VSYTV I GL   
Sbjct: 590 ELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQ 649

Query: 511 GRTEEAYILYSQM 523
           GR +EA  +  +M
Sbjct: 650 GRGKEALQVLEEM 662



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 98/391 (25%), Positives = 174/391 (44%), Gaps = 12/391 (3%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           F++M   G  PN    NIVMD L K G+VD     L+       +P+ +S+NI +  L K
Sbjct: 310 FEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFK 369

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            +     + V+  M++ G  P+   +  L+  FCK  R  +A  +L  MI  G       
Sbjct: 370 ASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVT 429

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNV-VTYTSLIKGFMEAKMFSIAFSFLDML 316
           +  LI G  +  RL  A  L  +M++NGC  +   TY ++I    +      A   +D +
Sbjct: 430 YNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHM 489

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
              G   + V +N+ ID L K G  D+A  +   L E+  + D  ++ +++  +C + + 
Sbjct: 490 TGHGVEANTVTYNIFIDRLCKEGRLDEASSL---LSEMDTLRDEVSYTTVIIGLCKAEQL 546

Query: 377 SLLPKLVCGLEVEADLVV----YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
               KL   +     L +    +N L+  F K    ++A+ L   M+ +G +P   ++  
Sbjct: 547 DRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNM 606

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           ++  LC   K+D+A  ++  + +     ++  +T ++  L   GR  +A+Q+        
Sbjct: 607 VITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSD 666

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQM 523
             +D +        L   GR EEA  L  +M
Sbjct: 667 CEIDDLKCRKLYLALRGQGRGEEAAELLRRM 697



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 96/214 (44%)

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
           +V  D+  YN L+   CKA   ++A ++ + M+D+G TPD  +F  ++ GLC A K + A
Sbjct: 5   KVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERA 64

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
            ++   +   N   +   +  ++  L +     +A  L    +   +  DVV+Y++   G
Sbjct: 65  HSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADG 124

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           L + GR +EA+ L  +M      PN  TY  ++   CK    +    LL+ ++ +    D
Sbjct: 125 LCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPD 184

Query: 567 YHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
             T   +   + K      A+  +  M   G  P
Sbjct: 185 VVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTP 218



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 2/149 (1%)

Query: 455 MNNPAVNAHVHT--AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           MN   V   V T   ++D L +A +  KA ++    +      D V++   + GL + G+
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
            E A+ L + M      P+  TY  ++   CK++N+   K L+ + + +    D  T   
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120

Query: 573 LTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           L   + K      A   + EM   G  P+
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPN 149


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 155/630 (24%), Positives = 291/630 (46%), Gaps = 63/630 (10%)

Query: 15  RTQILKTIISFKSIHQISSPKV-CATTHQDFPIILAPHIVHSTLLNCPSDLIALS----- 68
           RT  LK  I+F   HQ  +P   C   H     IL    ++ T  N   DL   S     
Sbjct: 61  RTLTLK-FINFAKPHQFFNPHCKCIALH-----ILTKFKLYKTAQNLAQDLAENSVDEKG 114

Query: 69  -FFIWCAKQRDYFHDVQS--FDHMISVVTRLTGRFETVR------------GIVGELARV 113
            +F  C K   +  +  S  FD ++   + L    + +             G++   A +
Sbjct: 115 NYFFQCLKDTYFMCNSSSAVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAIL 174

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG 173
             +++ +  ++F    +R            EM   G + N F+ NI++      G +++G
Sbjct: 175 DSIVRCRKPVIFAEKVYR------------EMIASGVSLNVFSYNILIRGFCAAGNLEMG 222

Query: 174 IKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
           ++  +E +    LPN +++N  +   CKL  +     ++  M  +G  PN+  + +++N 
Sbjct: 223 LRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVING 282

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
            C++GRI E   +L  M   G +     +  L++G+ ++     A  L  +M++NG  P+
Sbjct: 283 LCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPD 342

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
           VVTYTSLI    +A   + A  F D +   G  P+ V +  LI+  S+ G  D+A  ++D
Sbjct: 343 VVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWD 402

Query: 350 GLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAG 406
            ++     P   T+ +LL+  C+SGR      L+ G+E   +  D+V Y+ +++ FC+  
Sbjct: 403 EMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQ 462

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
             ++A ++   M++KG +PD  ++  L++GLC  R+++EA +++Q ++  +   +   +T
Sbjct: 463 ELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYT 522

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
           ++++   + G  ++A+ L    I + +  D V+Y V I GL +  RT EA  L  ++ + 
Sbjct: 523 SLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYD 582

Query: 527 AVPPNAYTYRVMLLSFCKERNIKMVKRLLQ------------DVIDARIELDYHTSIRLT 574
              PN  TY  ++ S C +   K V  L++             V ++ I+ +   +  + 
Sbjct: 583 ESIPNGITYDTLIES-CSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVY 641

Query: 575 KFIFKFHSSSSAVNQ----LVEMCNLGLIP 600
             I   H     V++      EM + G IP
Sbjct: 642 NVIIHGHCRDGNVHKAHKLYKEMVDFGFIP 671



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 134/585 (22%), Positives = 246/585 (42%), Gaps = 59/585 (10%)

Query: 74  AKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGE 133
           AK   +   V S++ ++  + R          +  E+   G  +   ++ + +R +    
Sbjct: 158 AKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAG 217

Query: 134 MYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFN 189
              M L  F+EM R    PN    N V+    K+ R+D   K+L+   L    PN L++N
Sbjct: 218 NLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYN 277

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
           + +  LC++  +     V+  M RKGF P+   +  L+N +CK+G   +A  L   M+  
Sbjct: 278 MVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRN 337

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           G    V  +T LI+   +   L+ A   +++M   G  PN VTYTSLI GF +      A
Sbjct: 338 GLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEA 397

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
           +   D +   G  P +V +N L++     G  ++A+ +  G+    L PD  ++ ++++ 
Sbjct: 398 YRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAG 457

Query: 370 VC----LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
            C    L   F +  ++V    V  D + Y++L+   C+    N+A  L+  ML+K   P
Sbjct: 458 FCRYQELDRAFQMNAEMV-EKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLP 516

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           D +++  L+ G C    ++EA+N++  ++      +   +  +++ L +  R  +A +L 
Sbjct: 517 DEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLL 576

Query: 486 RRAIVEKYPLDVVSY---------------TVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
            +   ++   + ++Y                  I+G    G   EA  ++  M      P
Sbjct: 577 LKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKP 636

Query: 531 NAYTYRVMLLSFCKERN-----------------------IKMVKRLLQDVIDARIEL-- 565
           N   Y V++   C++ N                       I +VK L  + +D ++ L  
Sbjct: 637 NEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVI 696

Query: 566 ----------DYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
                     D   S  L +   K  +  +  N L EM   G +P
Sbjct: 697 RDILRSCKLSDAELSKALVQINHKEGNIDAVFNLLTEMAKDGFLP 741



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/418 (25%), Positives = 202/418 (48%), Gaps = 4/418 (0%)

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGR-IAEAYQLLGLM 246
           F++ + +   LN +    +++ +    GF P V  +  +L+   +  + +  A ++   M
Sbjct: 135 FDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREM 194

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
           I  G SL+V ++ +LI GF     L+M    +E+M +N C PNVVTY ++I  + + K  
Sbjct: 195 IASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRI 254

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
             AF  L  +  EG  P+L+ +N++I+ L ++G  ++   V   +      PD  T+ +L
Sbjct: 255 DEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTL 314

Query: 367 LSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           ++  C  G F    +L   +    +  D+V Y +L++  CKAG  N+A++ ++ M  +G 
Sbjct: 315 VNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGL 374

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
            P+  ++  L+ G      +DEA  ++  ++ +        + A+++    +GR  +AI 
Sbjct: 375 RPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIG 434

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           L R    +    DVVSY+  I G       + A+ + ++M    V P+A TY  ++   C
Sbjct: 435 LLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLC 494

Query: 544 KERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           ++R +     L Q++++  +  D  T   L     K    + A+N   EM   G +PD
Sbjct: 495 EQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPD 552


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/520 (24%), Positives = 251/520 (48%), Gaps = 28/520 (5%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
           QR    D+ ++  +I  +  +  R      +   + ++GC   A T+   ++   +    
Sbjct: 375 QRGCILDIVTYSTLIKGLC-MEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNI 433

Query: 136 GMVLEAFDEM----GRFGFT--PNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNF 185
            + L+   EM    GR+G    P   + +I++D L K  R D   ++ +E +    +P+ 
Sbjct: 434 NIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDV 493

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGL 245
           +S+   +   C        K +   M+  G  P+V    +L++  CK G++ EA +LL +
Sbjct: 494 ISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEV 553

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           +I  G  L V   T L+ G     R+  A  L+ KM + GC PNVVT  +L+KG  ++  
Sbjct: 554 VIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGN 613

Query: 306 FSIAFSFLDMLESEGH------APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
             IA      + S+         P+ + ++++ID L K G  D+A +++  +  L ++PD
Sbjct: 614 IKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPD 673

Query: 360 SYTFCSLLSTVCLSGRFS----LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLY 415
             ++ SL+   C SG++     L  ++V  + V+ D+  ++ L+   CK G   +A +L 
Sbjct: 674 VISYTSLIHGFCRSGKWKDAKYLFNEMV-DIGVQPDVTTFSVLIDMLCKEGKVIEANELL 732

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
             M+ +G  P+  ++  L++GLC   +I EA  ++  +       +   +  ++  L + 
Sbjct: 733 EVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQT 792

Query: 476 GRCHKAIQLFRRAIVE------KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
           G    A++L ++ + +       +  DV+SY++ I GL + GR +EA  L+ +MK + V 
Sbjct: 793 GNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVI 852

Query: 530 PNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
           PN  +Y  ++  FC+   ++  K L  +++D  ++L+  T
Sbjct: 853 PNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVT 892



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 133/549 (24%), Positives = 243/549 (44%), Gaps = 33/549 (6%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV +   +I ++ +  G+      ++  + + GC++   T+   ++              
Sbjct: 53  DVTTSSMLIDILCK-EGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWL 111

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE----------TQLPNFLSFNIA 191
           F  M + G  P+      +M  L + G +++ +++ +E             P  +S++I 
Sbjct: 112 FMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSII 171

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           +  LCK       +++   M  +G  P+V  +  L++ FC  G+  +A  L   M+ +G 
Sbjct: 172 IDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGI 231

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
              V    VLID F +  ++  A  L E MV  GC  ++VTY++LIKG       S A  
Sbjct: 232 QPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQ 291

Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE------LKLV-PDSYTFC 364
               ++  G  PD + +  L+  L + G  + AL ++  +L       +K + PD  T  
Sbjct: 292 LFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSS 351

Query: 365 SLLSTVCLSGRFSLLPKLVCGLEVEA------DLVVYNALLSYFCKAGFPNQAVKLYNTM 418
            L+  +C  G+     +L   LEV        D+V Y+ L+   C     ++A  L+ +M
Sbjct: 352 MLIDILCKEGKVIEANEL---LEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSM 408

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV------HTAIVDRL 472
              G  PD  ++  L++GLC    I+ A+ ++Q ++ +              ++ I+D L
Sbjct: 409 QKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGL 468

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
            +  R  +A +LF     +    DV+SYT  I G    G+ E+A  L+++M  + + P+ 
Sbjct: 469 CKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDV 528

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVE 592
            T  V++   CK+  +    +LL+ VI     LD  T   L K +   H  S A    ++
Sbjct: 529 TTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLK 588

Query: 593 MCNLGLIPD 601
           M  LG +P+
Sbjct: 589 MQKLGCMPN 597



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 113/440 (25%), Positives = 207/440 (47%), Gaps = 64/440 (14%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEI---------LLNCFCKM 233
           P+  +FNI +  LC +  V+     +  ++R+G+ P++  + I         L++  CK 
Sbjct: 8   PDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCKE 67

Query: 234 GRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTY 293
           G++ EA +LL +MI  G  L +  ++ LI G     R+  A +L+  M + GC P+ +TY
Sbjct: 68  GKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITY 127

Query: 294 TSLIKGFMEAKMFSIAFSF-LDMLESEGH-----APDLVFHNVLIDCLSKMGSYDDALDV 347
            +L+KG  +    +IA     +ML   G       P L+ ++++ID L K    D+A ++
Sbjct: 128 GTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEAREL 187

Query: 348 YDGLLELKLVPDSYTFCSLLSTVCLSGRFS----------------------LLPKLVC- 384
           +  +    ++PD  ++ SL+   C SG++                       +L  + C 
Sbjct: 188 FKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCK 247

Query: 385 -GLEVEA--------------DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
            G  +EA              D+V Y+ L+   C     ++A +L+ +M   G  PD  +
Sbjct: 248 EGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIA 307

Query: 430 FVGLLRGLCGARKIDEAINVYQ---------GIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
           +  L++GLC   KI+ A++++Q         GI    P V     + ++D L + G+  +
Sbjct: 308 YGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTT--SSMLIDILCKEGKVIE 365

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
           A +L    I     LD+V+Y+  I+GL    R  EA  L+  M+ +   P+A TY  ++ 
Sbjct: 366 ANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMK 425

Query: 541 SFCKERNIKMVKRLLQDVID 560
             C+  NI +  +L Q++++
Sbjct: 426 GLCQTGNINIALQLHQEMLN 445



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 105/403 (26%), Positives = 197/403 (48%), Gaps = 23/403 (5%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCN-----LC 196
           F+EM   G  P+    ++++D+L K G+V    K+L E  +      ++  C      LC
Sbjct: 516 FNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLL-EVVIQRGCILDVVTCTTLVKGLC 574

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
             + +S    +   M + G  PNV     L+   C+ G I  A +L   M++  +   +N
Sbjct: 575 MKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGIN 634

Query: 257 ------AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
                 +++++IDG  +  R D A  L+++M   G  P+V++YTSLI GF  +  +  A 
Sbjct: 635 CKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAK 694

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
              + +   G  PD+   +VLID L K G   +A ++ + +++   +P++ T+ +L+  +
Sbjct: 695 YLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGL 754

Query: 371 CLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTML-DKG---- 422
           C++ R S   +L   ++      D+V Y  L+   C+ G    A++L+  ML D G    
Sbjct: 755 CMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGT 814

Query: 423 -FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
            F PD  S+  ++ GLC   + DEA  +++ +       N   +T+++     +G+   A
Sbjct: 815 NFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDA 874

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
             LF   + +   L+ V+Y+V I G  + G+ ++A  L+ +M+
Sbjct: 875 KHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKME 915



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 126/576 (21%), Positives = 241/576 (41%), Gaps = 54/576 (9%)

Query: 42  QDFPIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFE 101
           Q   I +A H+ H  +LN  S      + I C +      DV +   +I ++ +  G+  
Sbjct: 317 QTGKINIALHL-HQEMLNDTS-----QYGIKCIRP-----DVTTSSMLIDILCK-EGKVI 364

Query: 102 TVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVM 161
               ++  + + GC++   T+   ++              F  M + G  P+      +M
Sbjct: 365 EANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLM 424

Query: 162 DVLFKIGRVDLGIKVLKE----------TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
             L + G +++ +++ +E             P  +S++I +  LCK       +++   M
Sbjct: 425 KGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEM 484

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
             +G  P+V  +  L++ FC  G+  +A  L   M+ +G    V   +VLID   +  ++
Sbjct: 485 KAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKV 544

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
             A  L E ++Q GC  +VVT T+L+KG       S A      ++  G  P++V    L
Sbjct: 545 IEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATL 604

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEAD 391
           +  L + G+   AL+++  +L      D+  +                     G+  + +
Sbjct: 605 MKGLCQSGNIKIALELHKNML-----SDTSPY---------------------GINCKPN 638

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
            + Y+ ++   CK G  ++A +L+  M   G  PD  S+  L+ G C + K  +A  ++ 
Sbjct: 639 AISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFN 698

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
            +V      +    + ++D L + G+  +A +L    I      + V+YT  ++GL    
Sbjct: 699 EMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMND 758

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV----KRLLQDV--IDARIEL 565
           R  EA  L+ +M+ +   P+  TY  ++   C+  NIK      K++L D        + 
Sbjct: 759 RISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKP 818

Query: 566 DYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           D  +   +   + K      A     EM  LG+IP+
Sbjct: 819 DVISYSIIIDGLCKHGREDEARELFKEMKALGVIPN 854



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 90/353 (25%), Positives = 164/353 (46%), Gaps = 19/353 (5%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG 173
           GC++   T    ++            + F +M + G  PN      +M  L + G + + 
Sbjct: 558 GCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIA 617

Query: 174 IKV----LKETQ------LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMF 223
           +++    L +T        PN +S++I +  LCK       +++   M   G  P+V  +
Sbjct: 618 LELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISY 677

Query: 224 EILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQ 283
             L++ FC+ G+  +A  L   M+ +G    V  ++VLID   +  ++  A  L E M+Q
Sbjct: 678 TSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQ 737

Query: 284 NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
            GC PN VTYT+L+KG       S A      ++  G  PD+V +  L+  L + G+   
Sbjct: 738 RGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKT 797

Query: 344 ALDVYDGLLE------LKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVV 394
           AL+++  +L           PD  ++  ++  +C  GR      L K +  L V  +++ 
Sbjct: 798 ALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVIS 857

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
           Y +L+  FC++G    A  L+N M+D+G   +  ++  ++ G C   +ID+A+
Sbjct: 858 YTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 910



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/304 (26%), Positives = 138/304 (45%), Gaps = 26/304 (8%)

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
           G  PD    N+LI+CL  +   ++ L    G++    +PD  T+ S+   V  S   S+L
Sbjct: 5   GLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTY-SIRPDVTTS---SML 60

Query: 380 PKLVC--GLEVEA--------------DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
             ++C  G  +EA              D+V Y+ L+   C     ++A  L+ +M   G 
Sbjct: 61  IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV------HTAIVDRLIEAGR 477
            PD  ++  L++GLC    I+ A+ ++Q ++ +              ++ I+D L +  R
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 180

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
             +A +LF+    +    DV+SYT  I G    G+ E+A  L+++M  + + P+  T  V
Sbjct: 181 EDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGV 240

Query: 538 MLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLG 597
           ++  FCKE  +     LL+ ++     LD  T   L K +   H  S A    + M  LG
Sbjct: 241 LIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLG 300

Query: 598 LIPD 601
             PD
Sbjct: 301 CRPD 304


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 131/527 (24%), Positives = 250/527 (47%), Gaps = 15/527 (2%)

Query: 55  STLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVG 114
           + L   P    AL        + D+    + ++ +I  +    G  + ++ +V E+ R G
Sbjct: 49  TALREQPDPDAALRMLNAALAREDFAPGPEVYEEIIRKLGAAAGAADLMKVLVTEMRREG 108

Query: 115 CVIKAQTFLLFLRIYWRGEMY----GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV 170
             ++      FL  Y R +++     +VL   D +  FG   +T   N +++VL +  ++
Sbjct: 109 HQVRVGVVHSFLESYARQQLFVDAVDLVLNQLDPL--FGIQADTVVYNHLLNVLVEGSKM 166

Query: 171 DLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEIL 226
            L   V  E       P+ ++FN  +  LC+ + V     ++  M   G  P+   F  L
Sbjct: 167 KLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTL 226

Query: 227 LNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL-DMAGYLWEKMVQNG 285
           +  F + G I  A ++   M+ +G S +     VLI+G+ +L R+ D  GY+ ++ + NG
Sbjct: 227 MQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQE-IANG 285

Query: 286 CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL 345
             P+ +TY + + G  +      A   +D++  EGH PD+  +N++++CL K G  ++A 
Sbjct: 286 FEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAK 345

Query: 346 DVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL---LPKLVCGLEVEADLVVYNALLSYF 402
            + + ++E   +PD  TF +L+  +C   R      L + V    +  D+  +N L++  
Sbjct: 346 GILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINAL 405

Query: 403 CKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNA 462
           CK G P  A++L+  M   G TPD  ++  L+  LC   K+ +A+++ + +       + 
Sbjct: 406 CKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRST 465

Query: 463 HVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQ 522
             +  I+D L +  R  +A ++F +  ++    + +++   I GL +  R ++A  L SQ
Sbjct: 466 VTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQ 525

Query: 523 MKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
           M    + PN  TY  +L  +CK+ +IK    +LQ +     E+D  T
Sbjct: 526 MISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVT 572



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 117/508 (23%), Positives = 232/508 (45%), Gaps = 11/508 (2%)

Query: 47  ILAPHIVHSTLLNC---PSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETV 103
           I A  +V++ LLN     S +  L        +R    DV +F+ ++  + R   +  T 
Sbjct: 146 IQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCR-AHQVRTA 204

Query: 104 RGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDV 163
             ++ E++  G      TF   ++ +         L     M   G +P     N++++ 
Sbjct: 205 VLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLING 264

Query: 164 LFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN 219
             K+GRV+  +  +++       P+ +++N  +  LC+   V +   V+ +MV++G  P+
Sbjct: 265 YCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPD 324

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
           V  + I++NC CK G++ EA  +L  M+  G    +  +  LI       RL+ A  L  
Sbjct: 325 VFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLAR 384

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
           ++   G SP+V T+  LI    +     +A    + ++S G  PD V +N LID L  +G
Sbjct: 385 QVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLG 444

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYN 396
               ALD+   +        + T+ +++  +C   R     ++   ++++    + + +N
Sbjct: 445 KLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFN 504

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            L+   CK    + A +L + M+ +G  P+N ++  +L   C    I +A ++ Q +  N
Sbjct: 505 TLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTAN 564

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
              V+   +  +++ L +AGR   A++L R   ++       +Y   I+ L     T +A
Sbjct: 565 GFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDA 624

Query: 517 YILYSQMKHIAVPPNAYTYRVMLLSFCK 544
             L+ +M  +  PP+A+TY+++    C+
Sbjct: 625 MNLFREMTEVGEPPDAFTYKIVFRGLCR 652



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 119/566 (21%), Positives = 241/566 (42%), Gaps = 21/566 (3%)

Query: 52  IVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQS----FDHMISVVTRLTGRFETVRGIV 107
           +VHS L +     + +        Q D    +Q+    ++H+++V+     + + +  + 
Sbjct: 115 VVHSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVE-GSKMKLLETVY 173

Query: 108 GELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKI 167
            E+   G      TF   ++   R       +   +EM   G  P+      +M    + 
Sbjct: 174 SEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEE 233

Query: 168 GRVDLGIKV----LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMF 223
           G +   ++V    L+    P  ++ N+ +   CKL  V +    I   +  GF P+   +
Sbjct: 234 GSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITY 293

Query: 224 EILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQ 283
              +N  C+ G +  A +++ +M+  G    V  + ++++   +  +L+ A  +  +MV+
Sbjct: 294 NTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVE 353

Query: 284 NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
            GC P++ T+ +LI           A      +  +G +PD+   N+LI+ L K+G    
Sbjct: 354 RGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQL 413

Query: 344 ALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLS 400
           AL +++ +      PD  T+ +L+  +C  G+      L+  +E        V YN ++ 
Sbjct: 414 ALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIID 473

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
             CK     +A ++++ M  +G + +  +F  L+ GLC  ++ID+A  +   ++      
Sbjct: 474 GLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQP 533

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
           N   + +I+    + G   KA  + +      + +DVV+Y   I GL + GRT+ A  L 
Sbjct: 534 NNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLL 593

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK- 579
             M+   +      Y  ++ S  +  N +    L +++ +     D  T     K +F+ 
Sbjct: 594 RGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTY----KIVFRG 649

Query: 580 ----FHSSSSAVNQLVEMCNLGLIPD 601
                 S   A + L+EM + G IP+
Sbjct: 650 LCRGGGSIREAFDFLLEMVDKGFIPE 675



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 73/337 (21%), Positives = 144/337 (42%), Gaps = 5/337 (1%)

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF-LDMLESE-GHAPDLVFHN 329
           D+   L  +M + G    V    S ++ +   ++F  A    L+ L+   G   D V +N
Sbjct: 95  DLMKVLVTEMRREGHQVRVGVVHSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYN 154

Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGL 386
            L++ L +         VY  + E  + PD  TF +L+  +C + +     L+ + +   
Sbjct: 155 HLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSS 214

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
            V  D   +  L+  F + G    A+++   ML+ G +P   +   L+ G C   ++++A
Sbjct: 215 GVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDA 274

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
           +   Q  + N    +   +   V+ L + G    A+++    + E +  DV +Y + +  
Sbjct: 275 LGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNC 334

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           L + G+ EEA  + +QM      P+  T+  ++++ C    ++    L + V    +  D
Sbjct: 335 LCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPD 394

Query: 567 YHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
            +T   L   + K      A+    EM + G  PDE+
Sbjct: 395 VYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEV 431


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 129/528 (24%), Positives = 254/528 (48%), Gaps = 12/528 (2%)

Query: 50  PHIVH-STLLNCPSDLIALSFFIWCAKQRDYF---HDVQSFDHMISVVTRLTGRFETVRG 105
           P IV     L   + +   S  ++   Q D F   H V S + +I+ + RL    +    
Sbjct: 91  PSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLN-HVDFAVS 149

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           + G++ ++G      TF   +          + +E ++EM R G  P+  + N +++ L 
Sbjct: 150 VWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLC 209

Query: 166 KIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
             G  ++ + V K+ +     PN +++N  + +LCK   V++  D +  MV +G  P+  
Sbjct: 210 NSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAI 269

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            +  +++  C +G++ EA +L   M   G    V  + ++ID   + R ++ A     +M
Sbjct: 270 TYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEM 329

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
           V  G  P+VVTYT+++ G       + A      +E +G  PD+V +N +ID L K    
Sbjct: 330 VDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLV 389

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF---SLLPKLVCGLEVEADLVVYNAL 398
           +DA++    +++  + P++ T+ ++L   C  G+    + L K + G  V  + + ++ L
Sbjct: 390 NDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSIL 449

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           +   C+ G  ++A  ++ TM +KG  P+ Y++  L+ G C   K++EA  V++ +V    
Sbjct: 450 VDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGC 509

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
           A + H +  +++    + R  KA  L  +  V+K   + V+Y   ++GL   GR  +A  
Sbjct: 510 APDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQE 569

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           L+ +M    + P   TY ++L   CK  ++    +L + + + ++E D
Sbjct: 570 LFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPD 617



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 116/501 (23%), Positives = 224/501 (44%), Gaps = 7/501 (1%)

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
           +AR+        F  FL    + + Y  V+   ++M  FG T   ++ NI+++ L ++  
Sbjct: 84  MARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNH 143

Query: 170 VDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEI 225
           VD  +    K+ K    P+ ++F   +  +C    +    ++   MVR G  P+V  +  
Sbjct: 144 VDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNT 203

Query: 226 LLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
           L+N  C  G    A  +   M   G   +V  +  +ID   + R ++ A     +MV  G
Sbjct: 204 LINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRG 263

Query: 286 CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL 345
             P+ +TY S++ G       + A      +E  G  PD+V +N++ID L K    +DA 
Sbjct: 264 IPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAA 323

Query: 346 DVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYF 402
           D    +++  + PD  T+ ++L  +C  G+ +   +L   +E    + D+V YN ++   
Sbjct: 324 DFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSL 383

Query: 403 CKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNA 462
           CK    N A++  + M+D+G  P+  ++  +L G C   ++DEA  +++ +V  N   N 
Sbjct: 384 CKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNT 443

Query: 463 HVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQ 522
              + +VD L + G   +A  +F     +    ++ +Y   + G     +  EA  ++  
Sbjct: 444 LTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEI 503

Query: 523 MKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHS 582
           M      P+ ++Y +++  +C  R +   K LL  +   ++  +  T   + K +     
Sbjct: 504 MVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGR 563

Query: 583 SSSAVNQLVEMCNLGLIPDEM 603
              A     +MC+ G++P  M
Sbjct: 564 LLDAQELFKKMCSSGMLPTLM 584



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 91/403 (22%), Positives = 193/403 (47%), Gaps = 7/403 (1%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G+      +   + + GC     T+ + +   ++  +     +   EM   G  P+    
Sbjct: 282 GQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTY 341

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
             ++  L  +G+++  I++ K+ +     P+ +++N  + +LCK   V++  + +  MV 
Sbjct: 342 TTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVD 401

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +G  PN   +  +L+ FC +G++ EA QL   M+      +   +++L+DG  +   +  
Sbjct: 402 RGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSE 461

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A +++E M + G  PN+ TY +L+ G+      + A    +++  +G APDL  +N+LI+
Sbjct: 462 ARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILIN 521

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF---SLLPKLVCGLEVEA 390
                   D A  +   +   KL P++ T+ +++  +C  GR      L K +C   +  
Sbjct: 522 GYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLP 581

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
            L+ Y+ LL+  CK G  ++A+KL+ +M +K   PD   +  L+ G+    K++ A  ++
Sbjct: 582 TLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLF 641

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
             +  +        +  ++  L++ G   +A +LFR+  + K+
Sbjct: 642 SKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRKWKMMKH 684



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 119/548 (21%), Positives = 242/548 (44%), Gaps = 59/548 (10%)

Query: 36  VCATTHQDFPI----------ILAPHIVHSTLLN--CPSDLIALSFFIWCAKQRD-YFHD 82
           +C   H DF +          I    I  +TL+N  C    I ++  ++    R  +  D
Sbjct: 138 LCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPD 197

Query: 83  VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF 142
           V S++ +I+ +   +G       +  ++ + GC     T+   +    +  +    ++  
Sbjct: 198 VISYNTLINGLCN-SGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFL 256

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKL 198
            EM   G  P+    N ++  L  +G+++   ++ K  +     P+ +++NI + +L K 
Sbjct: 257 SEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKD 316

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
             V++  D +  MV +G  P+V  +  +L+  C +G++ EA +L   M   G    V A+
Sbjct: 317 RLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAY 376

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
             +ID   + R ++ A     +MV  G  PN VTY++++ GF        A      +  
Sbjct: 377 NTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVG 436

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL 378
               P+ +  ++L+D L + G   +A  V++ + E  + P+ YT+ +L++  CL  + + 
Sbjct: 437 RNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNE 496

Query: 379 LPK---LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
             K   ++ G     DL  YN L++ +C +   ++A  L   M  K  TP+  ++  +++
Sbjct: 497 ARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMK 556

Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
           GLC   ++ +A  +++ +  +        ++ +++ L + G   +A++LF+    +K   
Sbjct: 557 GLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEP 616

Query: 496 DVVSYT-----------------------------------VAIRGLLEGGRTEEAYILY 520
           D++ YT                                   V I+GLL+ G ++EAY L+
Sbjct: 617 DIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELF 676

Query: 521 SQ---MKH 525
            +   MKH
Sbjct: 677 RKWKMMKH 684



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 76/325 (23%), Positives = 149/325 (45%), Gaps = 3/325 (0%)

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
           +M +    P++V +   +    + K +S      + ++  G    +   N+LI+CL ++ 
Sbjct: 83  RMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLN 142

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYN 396
             D A+ V+  + +L + PD  TF +L++ VC  G+  +  +L   +     E D++ YN
Sbjct: 143 HVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYN 202

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            L++  C +G  N AV ++  M   G  P+  ++  ++  LC  R +++A++    +V  
Sbjct: 203 TLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGR 262

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
               +A  + +IV  L   G+ ++A +LF+R        DVV+Y + I  L +     +A
Sbjct: 263 GIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDA 322

Query: 517 YILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKF 576
               S+M    +PP+  TY  +L   C    +    RL + +     + D      +   
Sbjct: 323 ADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDS 382

Query: 577 IFKFHSSSSAVNQLVEMCNLGLIPD 601
           + K    + A+  L EM + G+ P+
Sbjct: 383 LCKDRLVNDAMEFLSEMVDRGIPPN 407


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 138/556 (24%), Positives = 255/556 (45%), Gaps = 52/556 (9%)

Query: 50  PHIVHSTLLNCPSDLIALSFFIWC-AKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVG 108
           P IV   + +     +AL+FF W  A    + H   S++ ++ V+ R     E      G
Sbjct: 43  PRIVGRVVNSLKDAKLALAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHRE-----AG 97

Query: 109 ELAR----VGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIV---- 160
           +L R      C     ++ + +  +         LE  +EM   GF P+ F    +    
Sbjct: 98  DLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAM 157

Query: 161 ---------MDVLFKIG-------------------RVDLGIKVLKETQ----LPNFLSF 188
                    MD L  +G                   +++  +K+L+E +     PN +++
Sbjct: 158 ANAGDLDGAMDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTY 217

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           N+ +  LCKL+ V   +DV+  M+  GF PNV  F  L++ FCK G + +A +LLG+M+ 
Sbjct: 218 NVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVA 277

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
            G   +V  ++ LIDG  + ++   A  + E+M   G +P+  TY++LI G  +A     
Sbjct: 278 KGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEE 337

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A   L  +   G  PD+V ++ +I    K G   +A      + + +  PD  T+ +++ 
Sbjct: 338 AEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVID 397

Query: 369 TVCLSGRFS----LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
            +C  G+ +    +L ++    +V  D+V Y+ +++  CK+    +A KL + M   G  
Sbjct: 398 GLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCN 457

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           PD  ++  ++ GLC   +++EA  + QG+     A N   +T ++  L +A +  +A ++
Sbjct: 458 PDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERV 517

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK--HIAVPPNAYTYRVMLLSF 542
                    P ++V+Y   + GL   GR +EA  L  +MK       P+A TYR ++ + 
Sbjct: 518 MEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNAL 577

Query: 543 CKERNIKMVKRLLQDV 558
                ++  ++LL+ +
Sbjct: 578 MSSDLVQEAEQLLEQM 593



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 208/431 (48%), Gaps = 12/431 (2%)

Query: 105 GIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVL 164
           G +  L  +GC     T+   +  + R +     ++  +EM   G  PN    N+++D L
Sbjct: 165 GAMDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDAL 224

Query: 165 FKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV 220
            K+  V    D+  K+++    PN ++FN  +   CK  +V + + ++G+MV KG  PNV
Sbjct: 225 CKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNV 284

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
             +  L++  CK  +  EA ++L  M T G +     ++ LI G  +  +++ A  +  +
Sbjct: 285 VTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRR 344

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           M  +GC+P+VV Y+S+I  F ++     A   L  +  +  +PD+V +N +ID L K+G 
Sbjct: 345 MAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGK 404

Query: 341 YDDALDVYDGLLEL-KLVPDSYTFCSLLSTVCLSGRFSLLPKLV---CGLEVEADLVVYN 396
             +A  + + + E   ++PD  T+ ++++ +C S       KL+   C      D+V Y 
Sbjct: 405 IAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYT 464

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            ++   CK G   +A  L   M   G  P+  ++  L+ GLC ARK+DEA  V + +   
Sbjct: 465 TIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNA 524

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR---AIVEKYPLDVVSYTVAIRGLLEGGRT 513
               N   +  +V+ L  +GR  +A QL +R      E  P D  +Y   +  L+     
Sbjct: 525 GCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSP-DAATYRTIVNALMSSDLV 583

Query: 514 EEAYILYSQMK 524
           +EA  L  QMK
Sbjct: 584 QEAEQLLEQMK 594



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 115/462 (24%), Positives = 204/462 (44%), Gaps = 13/462 (2%)

Query: 149 GFTPNTFARNIVMDVLFKIGR----VDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNV 204
           GF+   F+ N ++ VL +  +     DL    L  +  P+  S+NI +   C   D+   
Sbjct: 72  GFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAA 131

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
            +++  M   GF P+      ++      G +  A   L    ++G   +V  +T LI  
Sbjct: 132 LELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLR---SMGCDPNVVTYTALIAA 188

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
           F R ++L+ A  L E+M + GC PN+VTY  L+    +  M   A   +  +   G AP+
Sbjct: 189 FARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPN 248

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVC 384
           ++  N L+D   K G+ DDA  +   ++   + P+  T+ +L+  +C S +F    +++ 
Sbjct: 249 VMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLE 308

Query: 385 GLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
            ++   V  D   Y+AL+   CKA    +A ++   M   G TPD   +  ++   C + 
Sbjct: 309 EMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSG 368

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL--DVVS 499
           K+ EA    Q +     + +   +  ++D L + G+  +A Q+    + E   +  DVV+
Sbjct: 369 KLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEA-QVILEQMQESGDVLPDVVT 427

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           Y+  I GL +     EA  L  +M      P+  TY  ++   CK   ++  + LLQ + 
Sbjct: 428 YSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMK 487

Query: 560 DARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            A    +  T   L   + K      A   + EM N G  P+
Sbjct: 488 RAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPN 529



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 63/289 (21%), Positives = 122/289 (42%), Gaps = 49/289 (16%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           K R    D  ++  +I  + +   + E    ++  +A  GC      +   +  + +   
Sbjct: 311 KTRGVTPDAFTYSALIHGLCK-ADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKS-- 367

Query: 135 YGMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ-----LPNFL 186
            G +LEA     EM +   +P+    N V+D L K+G++     +L++ Q     LP+ +
Sbjct: 368 -GKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVV 426

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           +++  +  LCK + +   + ++  M + G  P+V  +  +++  CK GR+ EA  LL  M
Sbjct: 427 TYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGM 486

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVV--------------- 291
              G + +V  +T LI G  + R++D A  + E+M   GC PN+V               
Sbjct: 487 KRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRI 546

Query: 292 ----------------------TYTSLIKGFMEAKMFSIAFSFLDMLES 318
                                 TY +++   M + +   A   L+ ++S
Sbjct: 547 KEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMKS 595


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 214/424 (50%), Gaps = 7/424 (1%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDV 207
           P+ F  N ++  + K+ + DL I + ++ Q      N  ++NI +   C+ + +S    +
Sbjct: 8   PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
           +G M++ G+ P++     LLN +C   RI++A  L+  M+ +G       +T LI G   
Sbjct: 68  LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
             +   A  L ++MVQ GC PN+VTY  ++ G  +     +AF+ L+ +E+     D+V 
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL- 386
            N +ID L K    DDAL+++  +    + P+  T+ SL+S +C  GR+S   +L+  + 
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247

Query: 387 --EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
             ++  +LV +NAL+  F K G   +A KL++ M+ +   PD +++  L+ G C   ++D
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
           +A  +++ +V  +   +   +  ++    ++ R     +LFR         D V+YT  I
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367

Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
           +GL   G  + A  ++ QM    VPP+  TY ++L   C    ++    +   +  + I+
Sbjct: 368 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 427

Query: 565 LDYH 568
           LD +
Sbjct: 428 LDIY 431



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 117/480 (24%), Positives = 228/480 (47%), Gaps = 10/480 (2%)

Query: 85  SFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDE 144
            F+ ++S + ++  +F+ V  +  ++ R+G      T+ + +  + R     + L    +
Sbjct: 12  EFNKLLSAIAKMK-KFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGK 70

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET----QLPNFLSFNIALCNLCKLND 200
           M + G+ P+    + +++      R+   + ++ +       P+ ++F   +  L   N 
Sbjct: 71  MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 130

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
            S    ++  MV++G  PN+  + +++N  CK G I  A+ LL  M        V  +  
Sbjct: 131 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNT 190

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL-DMLESE 319
           +ID   + R +D A  L+++M   G  PNVVTY+SLI        +S A   L DM+E +
Sbjct: 191 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 250

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
            + P+LV  N LID   K G + +A  ++D +++  + PD +T+ SL++  C+  R    
Sbjct: 251 IN-PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKA 309

Query: 380 PKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
            ++   +   +   DL  YN L+  FCK+       +L+  M  +G   D  ++  L++G
Sbjct: 310 KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 369

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
           L      D A  V++ +V +    +   ++ ++D L   G+  KA+++F      +  LD
Sbjct: 370 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 429

Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
           +  YT  I G+ + G+ ++ + L+  +    V PN  TY  M+   C +R ++    LL+
Sbjct: 430 IYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLK 489



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 106/428 (24%), Positives = 191/428 (44%), Gaps = 32/428 (7%)

Query: 176 VLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGR 235
           ++K   LP+   FN  L  + K+     V  +   M R G   N+  + IL+NCFC+  +
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60

Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
           I+ A  LLG M+ LG   S+   + L++G+   +R+  A  L ++MV+ G  P+ +T+T+
Sbjct: 61  ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           LI G       S A + +D +   G  P+LV + V+++ L K G  D A           
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA----------- 169

Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLY 415
                               F+LL K+    ++EAD+V++N ++   CK    + A+ L+
Sbjct: 170 --------------------FNLLNKMEAA-KIEADVVIFNTIIDSLCKYRHVDDALNLF 208

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
             M  KG  P+  ++  L+  LC   +  +A  +   ++      N     A++D  ++ 
Sbjct: 209 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 268

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
           G+  +A +L    I      D+ +Y   I G     R ++A  ++  M      P+  TY
Sbjct: 269 GKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTY 328

Query: 536 RVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCN 595
             ++  FCK + ++    L +++    +  D  T   L + +F      +A     +M +
Sbjct: 329 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 388

Query: 596 LGLIPDEM 603
            G+ PD M
Sbjct: 389 DGVPPDIM 396



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 145/306 (47%), Gaps = 7/306 (2%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK---ETQL-PNFLSFNIALC 193
            L  F EM   G  PN    + ++  L   GR     ++L    E ++ PN ++FN  + 
Sbjct: 204 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 263

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
              K       + +   M+++   P++  +  L+N FC   R+ +A Q+   M++     
Sbjct: 264 AFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFP 323

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
            ++ +  LI GF + +R++    L+ +M   G   + VTYT+LI+G         A    
Sbjct: 324 DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 383

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
             + S+G  PD++ +++L+D L   G  + AL+V+D + + ++  D Y + +++  +C +
Sbjct: 384 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 443

Query: 374 GRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           G+      L C L    V+ ++V YN ++S  C      +A  L   M + G  PD+ ++
Sbjct: 444 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTY 503

Query: 431 VGLLRG 436
             L+R 
Sbjct: 504 NTLIRA 509



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/230 (22%), Positives = 104/230 (45%), Gaps = 5/230 (2%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDV 207
           P+    N ++    K  RV+ G ++ +E      + + +++   +  L    D  N + V
Sbjct: 323 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 382

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
              MV  G  P++  + ILL+  C  G++ +A ++   M      L +  +T +I+G  +
Sbjct: 383 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 442

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
             ++D    L+  +   G  PNVVTY ++I G    ++   A++ L  ++ +G  PD   
Sbjct: 443 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGT 502

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
           +N LI    + G    + ++   +   + V D+ T   L++ +   GR  
Sbjct: 503 YNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI-GLVANMLHDGRLD 551


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 139/491 (28%), Positives = 231/491 (47%), Gaps = 46/491 (9%)

Query: 97  TGRFETVRGIVGELARVG-CVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           +G+ E     V +L   G C I   TF +++    R    G     FD M + GF PN  
Sbjct: 29  SGKIEKAHRFVEQLLVKGLCDI--STFNIYISGLCRASRIGDAQTVFDGMRKHGFWPNRI 86

Query: 156 ARNIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
             N ++  L   GR+     L  +++K    P+ +++N  L   CK+  +     +    
Sbjct: 87  TYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGA 146

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT----------------------- 248
           V++GF P+V  +  L+N FCK  ++ EA ++L  M++                       
Sbjct: 147 VKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRV 206

Query: 249 ---------LGTSLSVNAWTVLIDGF-RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIK 298
                     G S +V  ++ LI G  R LRRL+ A  L EKMV NGC P++V+Y +LI 
Sbjct: 207 DEARMLIVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIH 266

Query: 299 GFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP 358
           G    +  S A      +  +G+ P++  +N+LID L K    ++A +++ GL++  L P
Sbjct: 267 GLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEP 326

Query: 359 DSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLY 415
           D+ T+   +  +C +GR     L+ K +       D+V +NA+++  CK    ++A  L 
Sbjct: 327 DAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLL 386

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
           + M  KG +P+  SF  L+ G C A K  +A+  ++ ++          +  +VD L +A
Sbjct: 387 SGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKA 446

Query: 476 ---GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
              GR  +AI LF   I +    DVV+Y+  I GL + G+ ++A  L   M+     PN 
Sbjct: 447 RQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNV 506

Query: 533 YTYRVMLLSFC 543
           YTY  ++   C
Sbjct: 507 YTYNSLISGLC 517



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/411 (28%), Positives = 217/411 (52%), Gaps = 13/411 (3%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE---TQLPNFLSFNIALCNLCKL 198
           +D++ R  ++P+ +   I++  L K G+++   + +++     L +  +FNI +  LC+ 
Sbjct: 5   YDKLVRI-YSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLCDISTFNIYISGLCRA 63

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
           + + + + V   M + GF+PN   +  LL+  C  GR+++A  L   MI  G S  V  +
Sbjct: 64  SRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTY 123

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
             L+ GF ++ +LD A  +++  V+ G  P+VVTY +LI GF +A     A   L  + S
Sbjct: 124 NTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVS 183

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC-----LS 373
           E   PD+V +N L++ L K G  D+A  +   +++    P+  T+ +L+S +C     L 
Sbjct: 184 ESLVPDVVTYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRRLE 240

Query: 374 GRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
               LL K+V     + D+V YNAL+    +    ++A+KL+ ++L +G+ P+  ++  L
Sbjct: 241 SARQLLEKMVLN-GCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNIL 299

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           + GL    +++EA  ++ G+V +    +A  +T  +D L +AGR   A+ + +    +  
Sbjct: 300 IDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGC 359

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
             DVVS+   I GL +  R +EA +L S M+     PNA ++  ++   C+
Sbjct: 360 VPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCR 410



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 125/468 (26%), Positives = 224/468 (47%), Gaps = 49/468 (10%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCK 197
           ++ M + G++P+    N ++    K+G++D  +K+    +K   +P+ +++N  +   CK
Sbjct: 108 YERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCK 167

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            + +   + ++  MV +   P+V  +  L+N  CK GR+ EA  L+   +  G S +V  
Sbjct: 168 ADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLI---VDKGFSPNVIT 224

Query: 258 WTVLIDGF-RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
           ++ LI G  R LRRL+ A  L EKMV NGC P++V+Y +LI G    +  S A      +
Sbjct: 225 YSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSV 284

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
             +G+ P++  +N+LID L K    ++A +++ GL++  L PD+ T+   +  +C +GR 
Sbjct: 285 LRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRV 344

Query: 377 S---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
               L+ K +       D+V +NA+++  CK    ++A  L + M  KG +P+  SF  L
Sbjct: 345 EDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTL 404

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA---GRCHKAIQLFRRAIV 490
           + G C A K  +A+  ++ ++          +  +VD L +A   GR  +AI LF   I 
Sbjct: 405 ICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIE 464

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR-------------- 536
           +    DVV+Y+  I GL + G+ ++A  L   M+     PN YTY               
Sbjct: 465 KGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDE 524

Query: 537 ---------------------VMLLSFCKERNIKMVKRLLQDVIDARI 563
                                 ++ + CK+  +     L    ++A +
Sbjct: 525 ALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGV 572



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 101/383 (26%), Positives = 186/383 (48%), Gaps = 13/383 (3%)

Query: 149 GFTPNTFARNIVMDVLFK-IGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSN 203
           GF+PN    + ++  L + + R++   ++L++  L    P+ +S+N  +  L +   VS 
Sbjct: 217 GFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSE 276

Query: 204 VKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLID 263
              + G ++R+G+ P V  + IL++   K  R+ EA++L   ++  G       +TV ID
Sbjct: 277 ALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFID 336

Query: 264 GFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP 323
           G  +  R++ A  + + M + GC P+VV++ ++I G  + K    A   L  +E++G +P
Sbjct: 337 GLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSP 396

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS---GRF---- 376
           + +  N LI    + G +  A+  +  +L+  + P   T+  L+  +C +   GR     
Sbjct: 397 NAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAI 456

Query: 377 SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
           +L   ++    V  D+V Y+AL+    KAG  + A +L   M  KG  P+ Y++  L+ G
Sbjct: 457 TLFDAMIEKGRV-PDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISG 515

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
           LCG  K+DEA+ ++  +V      +   +  I+  L +     KA+ LF  ++       
Sbjct: 516 LCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPT 575

Query: 497 VVSYTVAIRGLLEGGRTEEAYIL 519
              Y   I GL    R +EA  L
Sbjct: 576 SGMYFSLIDGLCAVARVDEALKL 598



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 142/328 (43%), Gaps = 15/328 (4%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVV---TRLTGRFETVRGIVGELARVGCVIKAQTF 122
           AL  F    +Q  Y  +V +++ +I  +    R+   FE   G+V    + G    A T+
Sbjct: 277 ALKLFGSVLRQ-GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLV----KHGLEPDAITY 331

Query: 123 LLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL 182
            +F+    +       L    +M   G  P+  + N V++ L K  RVD    +L   + 
Sbjct: 332 TVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEA 391

Query: 183 ----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKM---GR 235
               PN +SFN  +C  C+             M+++G  P V  + IL++  CK    GR
Sbjct: 392 KGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGR 451

Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
           I EA  L   MI  G    V  ++ LIDG  +  +LD A  L   M   GC PNV TY S
Sbjct: 452 IKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNS 511

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           LI G         A      +  +G  PD + +  +I  L K    D AL ++DG LE  
Sbjct: 512 LISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAG 571

Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKLV 383
           +VP S  + SL+  +C   R     KL+
Sbjct: 572 VVPTSGMYFSLIDGLCAVARVDEALKLL 599


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 130/551 (23%), Positives = 263/551 (47%), Gaps = 25/551 (4%)

Query: 32  SSPKVCATTHQDFPIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMIS 91
           +SP   A +  D  ++        +L + P D  AL  F   +K+ ++  +   ++ ++ 
Sbjct: 39  ASPHSAALSSTDVKLL-------DSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILL 91

Query: 92  VVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEM-GRFGF 150
            + R +G F+ ++ I+ ++    C +   TFL+ +  Y + E+   +L   D M   FG 
Sbjct: 92  RLGR-SGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGL 150

Query: 151 TPNTFARNIVMDVLF--------KIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVS 202
            P+T   N ++++L         +I    + +  +K    P+  +FN+ +  LC+ + + 
Sbjct: 151 KPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIK----PDVSTFNVLIKALCRAHQLR 206

Query: 203 NVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLI 262
               ++  M   G  P+ + F  ++  + + G +  A ++   M+  G S S  +  V++
Sbjct: 207 PAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIV 266

Query: 263 DGFRRLRRL-DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH 321
            GF +  R+ D   ++ E   Q+G  P+  T+ +L+ G  +A     A   +D++  EG+
Sbjct: 267 HGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGY 326

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF---SL 378
            PD+  +N +I  L K+G   +A++V D ++     P++ T+ +L+ST+C   +    + 
Sbjct: 327 DPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE 386

Query: 379 LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
           L +++    +  D+  +N+L+   C       A++L+  M  KG  PD +++  L+  LC
Sbjct: 387 LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLC 446

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
              K+DEA+N+ + + ++  A +   +  ++D   +A +  +A ++F    V     + V
Sbjct: 447 SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSV 506

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           +Y   I GL +  R E+A  L  QM      P+ YTY  +L  FC+  +IK    ++Q +
Sbjct: 507 TYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAM 566

Query: 559 IDARIELDYHT 569
                E D  T
Sbjct: 567 TSNGCEPDIVT 577



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 115/422 (27%), Positives = 182/422 (43%), Gaps = 42/422 (9%)

Query: 98  GRFETVRGIVGELARVGCVIKAQ-TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           GR E     + E++        Q TF   +    +       +E  D M + G+ P+ + 
Sbjct: 273 GRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYT 332

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N V+  L K+G V   ++VL +       PN +++N  +  LCK N V    ++  ++ 
Sbjct: 333 YNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLT 392

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
            KG  P+V  F  L+   C       A +L   M + G       + +LID      +LD
Sbjct: 393 SKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLD 452

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A  + ++M  +GC+ +V+TY +LI GF +A     A    D +E  G + + V +N LI
Sbjct: 453 EALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLI 512

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VE 389
           D L K    +DA  + D ++     PD YT+ SLL+  C  G       +V  +     E
Sbjct: 513 DGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCE 572

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            D+V Y  L+S  CKAG    A KL  ++  KG     +++  +++GL   RK  EAIN+
Sbjct: 573 PDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINL 632

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
           ++ ++  N A                                  P D VSY +  RGL  
Sbjct: 633 FREMLEQNEA----------------------------------PPDAVSYRIVFRGLCN 658

Query: 510 GG 511
           GG
Sbjct: 659 GG 660


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 146/574 (25%), Positives = 269/574 (46%), Gaps = 16/574 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWR-GEMYGMVLE 140
           DV S+  +I+ + +L    E  R ++ ++ + GC     T+   +  + R G++ G V E
Sbjct: 113 DVVSYTTVINGLCKLDQVDEACR-VMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAV-E 170

Query: 141 AFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-----PNFLSFNIALCNL 195
              +M   G+ PN    N +M  L    ++D  +++ KE +      P+  +++  + +L
Sbjct: 171 LVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSL 230

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
            K   V +   ++  MV KG  PNV  +  LL+  CK G++ EA  LL  M   G S ++
Sbjct: 231 VKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNI 290

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
             +  +IDG  +L R+D A +L E+MV  GC PNVVTYT L+  F +      A   +++
Sbjct: 291 VTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEV 350

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
           +  +G+ P+L  +N L+D   K    + A  +   +++   VP+  ++ ++++ +C + +
Sbjct: 351 MVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATK 410

Query: 376 FS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
                LL + +       D+V +N ++   CK    + A +L+N + + G TP+  ++  
Sbjct: 411 VHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNS 470

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNP-AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
           L+ GLC +R+ D+A  + + +      + +   +  ++D L ++ R  +A +LF + + +
Sbjct: 471 LVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSD 530

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
               D V+Y++ I  L +    +EA  +   M      P A TY  ++  FCK  N+   
Sbjct: 531 GLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKA 590

Query: 552 KRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLL- 610
             +LQ ++      D  T      ++ K      A   L  M   GL+PD +     L  
Sbjct: 591 LEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKG 650

Query: 611 ---SDETMTPVSLFDGFVPCERRAGNANHLLLNG 641
              +  T   V LF+    C     NA +  L G
Sbjct: 651 FCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVG 684



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 122/517 (23%), Positives = 235/517 (45%), Gaps = 10/517 (1%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
           AL  F    +      DV ++  ++  + + +G+ +    +V  +   GC     T+   
Sbjct: 203 ALQLFKEMEESGSCPPDVFTYSTIVDSLVK-SGKVDDACRLVEAMVSKGCSPNVVTYSSL 261

Query: 126 LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ---- 181
           L    +             M R G +PN    N ++D   K+GR+D    +L+E      
Sbjct: 262 LHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGC 321

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
            PN +++ + L   CK     +   ++ +MV KG+ PN+  +  LL+ FCK   +  A Q
Sbjct: 322 QPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQ 381

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           LL  MI  G   +V ++  +I G  +  ++     L E+M+ N C P++VT+ ++I    
Sbjct: 382 LLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMC 441

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK-LVPDS 360
           +     IA+   ++++  G  P+LV +N L+  L K   +D A  +   +   +   PD 
Sbjct: 442 KTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDI 501

Query: 361 YTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNT 417
            T+ +++  +C S R     KL   +  +    D V Y+ ++S  CK  F ++A  +   
Sbjct: 502 ITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLEL 561

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           ML  GF P   ++  L+ G C    +D+A+ + Q ++      +    +  +D L + GR
Sbjct: 562 MLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGR 621

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
             +A +L    +      D V+Y   ++G  +  RTE+A  L+  M+     P+  TY  
Sbjct: 622 LRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTT 681

Query: 538 MLLSFCKERNIK-MVKRLLQDVIDARIELDYHTSIRL 573
           ++     +++ K ++  + + ++D   +L++  S +L
Sbjct: 682 LVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKL 718



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 115/472 (24%), Positives = 230/472 (48%), Gaps = 11/472 (2%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
            +EM   GF PN F+ N V+    K  RV+  + +L++  +    P+ +S+   +  LCK
Sbjct: 67  LEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCK 126

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
           L+ V     V+  M+++G  PNV  +  L++ FC++G +  A +L+  M   G   +   
Sbjct: 127 LDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAIT 186

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNG-CSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
           +  ++ G    R+LD A  L+++M ++G C P+V TY++++   +++     A   ++ +
Sbjct: 187 YNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAM 246

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR- 375
            S+G +P++V ++ L+  L K G  D+A  +   +      P+  T+ +++   C  GR 
Sbjct: 247 VSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRI 306

Query: 376 ---FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
              + LL ++V G   + ++V Y  LL  FCK G    A+ L   M++KG+ P+ +++  
Sbjct: 307 DEAYHLLEEMVDG-GCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNS 365

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           LL   C   +++ A  +   ++      N   +  ++  L +A + H+ + L  + +   
Sbjct: 366 LLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNN 425

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVK 552
              D+V++   I  + +  R + AY L++ ++     PN  TY  ++   CK R     +
Sbjct: 426 CVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAE 485

Query: 553 RLLQDVIDAR-IELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
            LL+++   +    D  T   +   + K      A    ++M + GL PD++
Sbjct: 486 YLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDV 537



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 3/149 (2%)

Query: 455 MNNPAVNAH--VHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           MN   + AH  VH +I+  L +AG+C  A+  FR  + +  P D V+Y   I GL +  R
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFRE-MSKTCPPDSVTYNTMINGLSKSDR 59

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
            ++A  L  +M      PN ++Y  +L  FCK   ++    LL+ ++      D  +   
Sbjct: 60  LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119

Query: 573 LTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           +   + K      A   + +M   G  P+
Sbjct: 120 VINGLCKLDQVDEACRVMDKMIQRGCQPN 148



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/169 (21%), Positives = 72/169 (42%), Gaps = 1/169 (0%)

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           +LRGLC A +  +A+  ++ +    P  ++  +  +++ L ++ R   AI+L    +   
Sbjct: 16  ILRGLCDAGQCSDAVLHFREMSKTCPP-DSVTYNTMINGLSKSDRLDDAIRLLEEMVDNG 74

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVK 552
           +  +V SY   + G  +  R E A  L  QM     PP+  +Y  ++   CK   +    
Sbjct: 75  FAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEAC 134

Query: 553 RLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           R++  +I    + +  T   L     +      AV  + +M   G  P+
Sbjct: 135 RVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPN 183


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 135/515 (26%), Positives = 241/515 (46%), Gaps = 14/515 (2%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWR----GEMYGMVLEAFDEMGRFGFTPN 153
           G F+ + G+V E+ R G  ++A     F+  Y R     +   +VL   D    FG   +
Sbjct: 103 GAFDLMEGLVREMRREGHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDN-DTFGVQAD 161

Query: 154 TFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIG 209
           T   N +++VL +  ++ L   V  E       P+ ++ N  +  LC+ + V     ++ 
Sbjct: 162 TVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLE 221

Query: 210 MMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLR 269
            M   G  P+   F  L+  F + G I  A ++   M+  G S +     VLI+G+ ++ 
Sbjct: 222 EMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMG 281

Query: 270 RL-DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH 328
           R+ D  GY+ ++ + +G  P+ VTY + + G  +    S A   +D++  EGH PD+  +
Sbjct: 282 RVEDALGYIQQE-IADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTY 340

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV 388
           N +I+CLSK G  D+A  + + +++   +PD+ TF +L+  +    R      L   L V
Sbjct: 341 NTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTV 400

Query: 389 EA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
           +    D+  +N L++  CK G P+  ++L+  M   G TPD  ++  L+  LC   K+  
Sbjct: 401 KGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGN 460

Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
           A+++   +  N    +   +  I+D L +  R  +A ++F +   +      V++   I 
Sbjct: 461 ALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLID 520

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
           GL +  R ++A  L  QM    + PN  TY  +L  +CK+ NIK    +L+ +     E+
Sbjct: 521 GLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEI 580

Query: 566 DYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           D  T   L   + K   +  A+  L  M   G+ P
Sbjct: 581 DVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRP 615



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 95/402 (23%), Positives = 167/402 (41%), Gaps = 73/402 (18%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
           Q  +  DV +++ +I+ +++  G  +  +GIV ++   GC+    TF   +         
Sbjct: 330 QEGHDPDVFTYNTVINCLSK-NGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRL 388

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIA 191
              L+   E+   G +P+ +  NI+++ L K+G   LGI++ +E +     P+ +++NI 
Sbjct: 389 EEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNIL 448

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           + +LC +  + N  D++  M   G   +   +  +++  CK  RI EA ++   M   G 
Sbjct: 449 IDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGI 508

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN---------------------- 289
           S S   +  LIDG  + +R+D A  L E+MV+ G  PN                      
Sbjct: 509 SRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAAD 568

Query: 290 -------------VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
                        VVTY +LI G  +A    +A   L  +  +G  P    +N +I  L 
Sbjct: 569 ILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLF 628

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYN 396
           +  +  DAL+++  + E+   PD+ T                                Y 
Sbjct: 629 RRNNLRDALNLFREMTEVGEPPDALT--------------------------------YK 656

Query: 397 ALLSYFCKAGFP-NQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
            +    C+ G P  +A      M++KGF P+  SF  L  GL
Sbjct: 657 IVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGL 698



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 65/321 (20%), Positives = 130/321 (40%), Gaps = 6/321 (1%)

Query: 287 SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALD 346
           +P+   Y  +++    A  F +    +  +  EGH    V     ++  +++  +DDA+D
Sbjct: 86  APSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFVESYARLRRFDDAVD 145

Query: 347 VYDGLLE---LKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALLS 400
           +    L+     +  D+  F  LL+ +    +  LL  +   + G  ++ D+V  N L+ 
Sbjct: 146 LVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIK 205

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
             C+A     AV +   M   G  PD  +F  L++G      I+ A+ V   ++    + 
Sbjct: 206 ALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSP 265

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
                  +++   + GR   A+   ++ I + +  D V+Y   + GL + G    A  + 
Sbjct: 266 TGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVM 325

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKF 580
             M      P+ +TY  ++    K   +   K ++  ++D     D  T   L   +   
Sbjct: 326 DLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQ 385

Query: 581 HSSSSAVNQLVEMCNLGLIPD 601
           +    A++   E+   GL PD
Sbjct: 386 NRLEEALDLARELTVKGLSPD 406


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 144/593 (24%), Positives = 268/593 (45%), Gaps = 52/593 (8%)

Query: 57  LLNCPSDL-IALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGC 115
           LL  P D+  ++  F W   Q+ Y H    +  +I  +    G F+ +  ++ ++   G 
Sbjct: 77  LLELPLDVETSMEIFKWAGAQKGYCHSFSVYYLLIDKLGAAAG-FKVIDRLLLQMKEEGI 135

Query: 116 VIKAQTFLLFLRIYWRGEMYGMVLEAFDEM-GRFGFTPNTFARNIVMDVLFKIGRV---- 170
           V +   F+L ++ Y R  + G       +M G +   P+  + N+V+DVL  +G      
Sbjct: 136 VFRESLFILIMKYYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDVLV-VGNCPSVA 194

Query: 171 -DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
            ++   +L +   PN  +F + +  LC +N+V N   ++  M + G  PN  +++ L++ 
Sbjct: 195 SNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDA 254

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
             K  R+ EA +LL  M  +G    VN +  +I GF RL R+     L ++M+  G +PN
Sbjct: 255 LSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPN 314

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALD-VY 348
            +TY  L+ G  +      A + L    S+   P++V  N L++   + G  ++A   VY
Sbjct: 315 DMTYGYLMHGLCKTCRIDEAQALL----SKVPGPNVVHFNTLVNGFVRNGRLNEATAFVY 370

Query: 349 DGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV-------------------- 388
           D ++    VPD +TF +L++ +C  G F    +LV  ++                     
Sbjct: 371 DKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKK 430

Query: 389 ----EADLVV--------------YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
               EA L++              YNAL+S  CK G  ++A+ ++  M  KG  PD ++F
Sbjct: 431 GQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTF 490

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             L+ GLC   ++++A+ +Y+ +V+     N+     ++   +  G   +A++L    + 
Sbjct: 491 NSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLF 550

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
              PLD ++Y   I+ L + G  E+   L+ +M    + P+  T  +++  FC    +  
Sbjct: 551 RGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHN 610

Query: 551 VKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
               ++D+I      D  T   L   + K      A+N   ++   G+ PD +
Sbjct: 611 ALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSI 663



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 120/447 (26%), Positives = 216/447 (48%), Gaps = 51/447 (11%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLN 199
           +M + G  PN+     ++D L K  RVD  +K+L+E  L    P+  +FN  +   C+LN
Sbjct: 235 DMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLN 294

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
            V     ++  M+ KGF PN   +  L++  CK  RI EA  LL  +       +V  + 
Sbjct: 295 RVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKV----PGPNVVHFN 350

Query: 260 VLIDGFRRLRRLDMA-GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
            L++GF R  RL+ A  ++++KM+ NG  P+V T+++L+ G  +  +F  A   ++ +++
Sbjct: 351 TLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDA 410

Query: 319 EGHAPDL-----------------------------------VFHNVLIDCLSKMGSYDD 343
           +G  P+L                                   V +N LI  L K G   +
Sbjct: 411 KGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHE 470

Query: 344 ALDVYDGLLELKLVPDSYTFCSLLSTVC----LSGRFSLLPKLVCGLE-VEADLVVYNAL 398
           ALD++  +      PD +TF SL+  +C    +    +L   +V  LE V A+ V +N L
Sbjct: 471 ALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMV--LEGVIANSVTFNTL 528

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           +  F + G   +A+KL N ML +G   D  ++ GL++ LC    +++ + +++ ++    
Sbjct: 529 IHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGL 588

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
             +      +++    AG+ H A++  R  I   +  D+V+Y   I GL + GR +EA  
Sbjct: 589 TPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALN 648

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKE 545
           L+ +++   + P++ TY  ++   C+E
Sbjct: 649 LFEKLQAEGIQPDSITYNTLICWLCRE 675



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 124/459 (27%), Positives = 211/459 (45%), Gaps = 16/459 (3%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA---FDEMGRFGFTPNTF 155
           R +    ++ E+  +GC     TF   +  + R      VLE     D M   GFTPN  
Sbjct: 260 RVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCR---LNRVLEGAKLVDRMILKGFTPNDM 316

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCK---LNDVSNVKDVIGMMV 212
               +M  L K  R+D    +L +   PN + FN  +    +   LN+ +    V   M+
Sbjct: 317 TYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAF--VYDKMI 374

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
             G+ P+V  F  L+N  CK G    A +L+  M   G   ++N +T+LIDGF +  +L+
Sbjct: 375 NNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLE 434

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            AG +  +M+  G S N V Y +LI    +      A      + S+G  PD+   N LI
Sbjct: 435 EAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLI 494

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA-- 390
             L ++   +DAL +Y  ++   ++ +S TF +L+      G      KLV  +      
Sbjct: 495 FGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCP 554

Query: 391 -DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            D + YN L+   CK G   + + L+  M+ KG TP   +   L+ G C A K+  A+  
Sbjct: 555 LDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEF 614

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL- 508
            + ++    + +   + ++++ L + GR  +A+ LF +   E    D ++Y   I  L  
Sbjct: 615 MRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCR 674

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN 547
           EG   +  ++LY  +++  V PN  T+ +++ +F K+ N
Sbjct: 675 EGAFDDACFLLYRGVENGFV-PNDVTWNILVYNFGKQSN 712



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 164/341 (48%), Gaps = 16/341 (4%)

Query: 49  APHIVH-STLLNC---PSDLIALSFFIWCAK-QRDYFHDVQSFDHMISVVTRLTGRFETV 103
            P++VH +TL+N       L   + F++       Y  DV +F  +++ + +  G F + 
Sbjct: 343 GPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCK-KGLFGSA 401

Query: 104 RGIVGELARVGCVIKAQTFLLFLRIYWRG---EMYGMVLEAFDEMGRFGFTPNTFARNIV 160
             +V ++   GC     T+ + +  + +    E  G++L    EM   GF+ NT   N +
Sbjct: 402 LELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILR---EMLTKGFSLNTVGYNAL 458

Query: 161 MDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
           +  L K G++   + +  E       P+  +FN  +  LC+++++ +   +   MV +G 
Sbjct: 459 ISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGV 518

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
             N   F  L++ F + G I EA +L+  M+  G  L    +  LI    +   ++    
Sbjct: 519 IANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLG 578

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           L+E+M++ G +P+++T   LI GF  A     A  F+  +   G +PD+V +N LI+ L 
Sbjct: 579 LFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLC 638

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
           K G   +AL++++ L    + PDS T+ +L+  +C  G F 
Sbjct: 639 KRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFD 679



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 85/357 (23%), Positives = 152/357 (42%), Gaps = 9/357 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIV-GELARVGCVIKAQTFLLFLRIYWRGEMYGMVLE 140
           +V  F+ +++   R  GR       V  ++   G V    TF   +    +  ++G  LE
Sbjct: 345 NVVHFNTLVNGFVR-NGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALE 403

Query: 141 AFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF----LSFNIALCNLC 196
             ++M   G  PN     I++D   K G+++    +L+E     F    + +N  +  LC
Sbjct: 404 LVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALC 463

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
           K   +    D+ G M  KG  P++  F  L+   C++  + +A  L   M+  G   +  
Sbjct: 464 KHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSV 523

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
            +  LI  F R   +  A  L   M+  GC  + +TY  LIK   +           + +
Sbjct: 524 TFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEM 583

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
             +G  P ++  N+LI+     G   +AL+    ++     PD  T+ SL++ +C  GR 
Sbjct: 584 IRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRI 643

Query: 377 SLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
                L   L+ E    D + YN L+ + C+ G  + A  L    ++ GF P++ ++
Sbjct: 644 QEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTW 700



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/252 (23%), Positives = 109/252 (43%), Gaps = 5/252 (1%)

Query: 85  SFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDE 144
            ++ +IS + +  G+      + GE++  GC     TF   +    R +     L  + +
Sbjct: 454 GYNALISALCK-HGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRD 512

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP----NFLSFNIALCNLCKLND 200
           M   G   N+   N ++    + G +   +K++ +        + +++N  +  LCK   
Sbjct: 513 MVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGA 572

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
           V     +   M+RKG  P++    IL+N FC  G++  A + +  MI  G S  +  +  
Sbjct: 573 VEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNS 632

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           LI+G  +  R+  A  L+EK+   G  P+ +TY +LI        F  A   L      G
Sbjct: 633 LINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENG 692

Query: 321 HAPDLVFHNVLI 332
             P+ V  N+L+
Sbjct: 693 FVPNDVTWNILV 704


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 120/473 (25%), Positives = 215/473 (45%), Gaps = 37/473 (7%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNL 195
           E F+E+   G +PN  A   V+D L K GR++ G+K  +E      +P   ++ + +  L
Sbjct: 129 ELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGL 188

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
           CK   + +   V   MV+KG  P+   +  L++ F K  ++ EA +LL +M+T G   + 
Sbjct: 189 CKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTA 248

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
             +  ++ GF +L  ++ A  +  +M + GC P +  +TSL+  ++       A+  L  
Sbjct: 249 VTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTE 308

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
           + + G APD++ +  LID L   G   +A  V+D ++E    PD+ T             
Sbjct: 309 MTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALT------------- 355

Query: 376 FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
                              Y  ++  F K G    A ++   M   G  PD +++  L+ 
Sbjct: 356 -------------------YGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMD 396

Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI-VEKYP 494
           G     ++D+A  VY  +V +    NA     ++  L + G+  +A  LF+  +  E+ P
Sbjct: 397 GYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVP 456

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
             +VSYT+ I GL + GR  EA++ + +M    + P  +TY  ++ S  K   I   K+L
Sbjct: 457 PTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKL 516

Query: 555 LQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKL 607
           ++D++   +  D      L   +       +A +   EM   G  P+E+  K+
Sbjct: 517 VEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKV 569



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 114/425 (26%), Positives = 205/425 (48%), Gaps = 12/425 (2%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR E       E++   CV    T+ + +    + +M     + F++M + G  P+T   
Sbjct: 157 GRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITY 216

Query: 158 NIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
             ++D   K  ++D   K+L     +   P  +++   +   CKL+ ++  K+VI  M  
Sbjct: 217 TTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRE 276

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +G  P + +F  LL+ +   GR  EAYQ+L  M   G +  V  +T LID      R+  
Sbjct: 277 RGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPE 336

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A ++++ M++ GC+P+ +TY ++I+ F +      A   L+++   G  PD   +N L+D
Sbjct: 337 ARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMD 396

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVE 389
              K+   D A  VYD ++   + P++ TF  L+  +   G+    FSL  +++   EV 
Sbjct: 397 GYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVP 456

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
             LV Y  L+    KAG  ++A   +  M+D+G  P+ +++  L+  L  A +I EA  +
Sbjct: 457 PTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKL 516

Query: 450 YQGIVM--NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            + +V    NP V A  ++A++  LI++     A  +F+  +      + V+Y V  RG 
Sbjct: 517 VEDMVKLGVNPDVQA--YSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGF 574

Query: 508 LEGGR 512
              GR
Sbjct: 575 RAAGR 579



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 107/462 (23%), Positives = 201/462 (43%), Gaps = 17/462 (3%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIK----VLKETQLPNFLSFNIALCNLCKLNDVSNV 204
           G  P   + N V+  L  I ++D   K    ++     P+ ++F   +   CK       
Sbjct: 2   GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
             ++   +++ F P+V ++  +++ +CK G +   Y      +T   SL V ++T +I G
Sbjct: 62  HKLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTGYFR---AVTPKASLDVISYTTVIKG 117

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
               +R+D A  L+E++   GCSPNVV YT++I G ++A          + +      P 
Sbjct: 118 LADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPT 177

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVC 384
              + V+ID L K     DA  V++ +++   VPD+ T+ +L+     + +     KL  
Sbjct: 178 RTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKL-- 235

Query: 385 GLEV------EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
            L+V      E   V Y +++  FCK    N+A ++   M ++G  P  + F  LL    
Sbjct: 236 -LDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYL 294

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
              + +EA  V   +     A +  ++T+++D L   GR  +A  +F   I +    D +
Sbjct: 295 SKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDAL 354

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           +Y   I+   + G  E A  +   M    V P+ + Y  ++  + K   +     +   +
Sbjct: 355 TYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRM 414

Query: 559 IDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           + + I+ +  T   L   +FK   +  A +   EM     +P
Sbjct: 415 VASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVP 456



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/317 (20%), Positives = 131/317 (41%), Gaps = 1/317 (0%)

Query: 285 GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
           GC P +V+Y ++I G         A+ F + +   G  PD++    LI    K G     
Sbjct: 2   GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCK 404
             + +  L+ +  PD + + S++   C +G            +   D++ Y  ++     
Sbjct: 62  HKLLNQALK-RFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLAD 120

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV 464
           +   ++A +L+  +   G +P+  ++  ++ GL  A +I++ +  ++ +  ++       
Sbjct: 121 SKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTT 180

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
           +T ++D L +A     A ++F + + +    D ++YT  I G  +  + +EA  L   M 
Sbjct: 181 YTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVML 240

Query: 525 HIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSS 584
                P A TY  ++  FCK   I   K ++  + +   E        L  +      + 
Sbjct: 241 TKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAE 300

Query: 585 SAVNQLVEMCNLGLIPD 601
            A   L EM   G  PD
Sbjct: 301 EAYQVLTEMTARGCAPD 317



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 85/378 (22%), Positives = 142/378 (37%), Gaps = 71/378 (18%)

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
           +G   ++ ++  +I G   + ++D A   +  M+ NGC P+V+ +T+LI GF +A    +
Sbjct: 1   MGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQV 60

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD----------ALDVYD------GLL 352
               L+        PD+  +  +I    K G  D           +LDV        GL 
Sbjct: 61  GHKLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLA 119

Query: 353 ELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL----EVEADL---------------V 393
           + K + ++      L T   S        ++ GL     +E  L                
Sbjct: 120 DSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRT 179

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            Y  ++   CKA     A K++  M+ KG  PD  ++  L+ G   A K+DEA  +   +
Sbjct: 180 TYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVM 239

Query: 454 VMNNPAVNAHVHTAIV------DRLIEA-----------------------------GRC 478
           +   P   A  + +IV      D + EA                             GR 
Sbjct: 240 LTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRA 299

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            +A Q+           DV+ YT  I  L   GR  EA  ++  M      P+A TY  +
Sbjct: 300 EEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTI 359

Query: 539 LLSFCKERNIKMVKRLLQ 556
           + +F K  N++    +L+
Sbjct: 360 IQNFSKIGNVEAAGEILE 377


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/452 (26%), Positives = 225/452 (49%), Gaps = 23/452 (5%)

Query: 140 EAFDEMGRFGFT--PNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALC 193
           E  ++ GR+G    P   + +I++D L K  R D   ++ KE +    +P+ +S+   + 
Sbjct: 286 EMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIH 345

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
             C        K +   M+  G  P+V    +L++  CK G++ EA +LL ++I  G   
Sbjct: 346 GFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIP 405

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
            V   T L+ G     R+  A  L+ KM + GC PNVVT  +L+KG  ++    IA    
Sbjct: 406 DVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELH 465

Query: 314 DMLESEGH------APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
             + S+         P+ + ++++ID L K G  D+A +++  +  L ++PD  ++ SL+
Sbjct: 466 KNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLI 525

Query: 368 STVCLSGRFS----LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
              C SG++     L  ++V  + V+ D+  ++ L+   CK G   +A +L   M+ +G 
Sbjct: 526 HGFCRSGKWKDAKYLFNEMV-DIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGC 584

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
            P+  ++  L++GLC   +I EA  ++  +       +   +  ++  L + G    A++
Sbjct: 585 IPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALE 644

Query: 484 LFRRAIVE------KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
           L ++ + +       +  DV+SY++ I GL + GR +EA  L+ +MK + V PN  +Y  
Sbjct: 645 LHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTS 704

Query: 538 MLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
           ++  FC+   ++  K L  +++D  ++L+  T
Sbjct: 705 LIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVT 736



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 129/553 (23%), Positives = 249/553 (45%), Gaps = 62/553 (11%)

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
           + + GC++   T+   ++            + F  M + G  P+  A   +M  L + G+
Sbjct: 36  MVQRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGK 95

Query: 170 VDLGI----KVLKETQL------PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN 219
           +++ +    ++L +T        P  +S++I +  LCK       +++   M  +G  P+
Sbjct: 96  INIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPD 155

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
           V  +  L++ FC+ G+  +A  L   M+ +G    V   ++LID   +  ++  A  L E
Sbjct: 156 VISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLE 215

Query: 280 KMVQNGCSPNVVTYTSLIKG-------------FMEAKMF-----SIAFSFL-------- 313
            M+Q GC  ++VTY++LIKG             FM  +       +IA+  L        
Sbjct: 216 VMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTG 275

Query: 314 ----------DMLESEGH-----APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP 358
                     +ML   G       P L+ ++++ID L K    D+A +++  +    ++P
Sbjct: 276 NINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMP 335

Query: 359 DSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLY 415
           D  ++ +L+   CLSG++     L   +  + ++ D+   + L+   CK G   +A KL 
Sbjct: 336 DVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLL 395

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
             ++ +G  PD  +   L++GLC   +I +A  ++  +       N      ++  L ++
Sbjct: 396 EVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQS 455

Query: 476 GRCHKAIQLFRRAIVEKYPLDV------VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
           G    A++L +  + +  P  +      +SY++ I GL + GR +EA  L+ +MK + V 
Sbjct: 456 GNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVI 515

Query: 530 PNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQ 589
           P+  +Y  ++  FC+    K  K L  +++D  ++ D  T   L   + K      A N+
Sbjct: 516 PDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEA-NE 574

Query: 590 LVE-MCNLGLIPD 601
           L+E M   G IP+
Sbjct: 575 LLEVMIQRGCIPN 587



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 113/441 (25%), Positives = 203/441 (46%), Gaps = 50/441 (11%)

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M+  G  P+V    +L++ FCK G++ EA +LL +M+  G  L +  ++ LI G     R
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF-LDMLESEGH-----APD 324
           +  A  L+  M + GC P+ + Y +L+KG  +    +IA     +ML           P 
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF-------- 376
           LV ++++ID L K    D+A +++  +    ++PD  ++ SL+   C SG++        
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180

Query: 377 --------------SLLPKLVC--GLEVEA--------------DLVVYNALLSYFCKAG 406
                         S+L  ++C  G  +EA              D+V Y+ L+   C   
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKH 240

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV-- 464
             ++A +L+ +M   G  PD  ++  L++GLC    I+ A+ ++Q ++ +          
Sbjct: 241 RISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKP 300

Query: 465 ----HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
               ++ I+D L +  R  +A +LF+    +    DV+SYT  I G    G+ E+A  L+
Sbjct: 301 TLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLF 360

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKF 580
           ++M  + + P+  T  V++   CK+  +    +LL+ VI      D  T   L K +   
Sbjct: 361 NEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMK 420

Query: 581 HSSSSAVNQLVEMCNLGLIPD 601
           H  S A    ++M  LG +P+
Sbjct: 421 HRISKATQLFLKMQKLGCMPN 441



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 200/426 (46%), Gaps = 54/426 (12%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIK----VLKETQLPNFLSFNIALCNLCK 197
           F+EM   G  P+    ++++D+L K G+V    K    V++   +P+ ++    +  LC 
Sbjct: 360 FNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCM 419

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN- 256
            + +S    +   M + G  PNV     L+   C+ G I  A +L   M++  +   +N 
Sbjct: 420 KHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINC 479

Query: 257 -----AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
                +++++IDG  +  R D A  L+++M   G  P+V++YTSLI GF  +  +  A  
Sbjct: 480 KPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKY 539

Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
             + +   G  PD+   +VLID L K G   +A ++ + +++   +P++ T+ +L+  +C
Sbjct: 540 LFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLC 599

Query: 372 LSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTML-DKG----- 422
           ++ R S   +L   ++      D+V Y  L+   C+ G    A++L+  ML D G     
Sbjct: 600 MNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTN 659

Query: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI 482
           F PD  S+  ++ GLC   + DEA  +++ +                          KA+
Sbjct: 660 FKPDVISYSIIIDGLCKHGREDEARELFKEM--------------------------KAL 693

Query: 483 QLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
            +           +V+SYT  I G    G+ E+A  L+++M    V  NA TY VM+  F
Sbjct: 694 GVIP---------NVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGF 744

Query: 543 CKERNI 548
           CKE  I
Sbjct: 745 CKEGQI 750



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 120/519 (23%), Positives = 231/519 (44%), Gaps = 48/519 (9%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           R +  R +  E+   G +    ++   +  + R   +      F+EM   G   +    +
Sbjct: 136 REDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSS 195

Query: 159 IVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
           +++D+L K G+V    +L   +++   + + ++++  +  LC  + +S    +   M + 
Sbjct: 196 MLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKL 255

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT------LGTSLSVNAWTVLIDGFRRL 268
           G  P+   +  L+   C+ G I  A QL   M+       +    ++ +++++IDG  + 
Sbjct: 256 GCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKD 315

Query: 269 RRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH 328
           RR D A  L+++M   G  P+V++YT+LI GF  +  +  A    + +   G  PD+   
Sbjct: 316 RREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTS 375

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV 388
           +VLID L K G   +A  + + +++   +PD  T  +L+  +C+  R S           
Sbjct: 376 SVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRIS----------- 424

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
                                +A +L+  M   G  P+  +   L++GLC +  I  A+ 
Sbjct: 425 ---------------------KATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALE 463

Query: 449 VYQGIVMN------NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTV 502
           +++ ++ +      N   NA  ++ I+D L + GR  +A +LF+         DV+SYT 
Sbjct: 464 LHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTS 523

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
            I G    G+ ++A  L+++M  I V P+  T+ V++   CKE  +     LL+ +I   
Sbjct: 524 LIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRG 583

Query: 563 IELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
              +  T   L K +      S A    ++M  LG +PD
Sbjct: 584 CIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPD 622



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 118/536 (22%), Positives = 227/536 (42%), Gaps = 43/536 (8%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV +   +I ++ +  G+      ++  + + GC++   T+   ++              
Sbjct: 190 DVTTSSMLIDILCK-EGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRL 248

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE----------TQLPNFLSFNIA 191
           F  M + G  P+  A   +M  L + G ++  +++ +E             P  +S++I 
Sbjct: 249 FMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSII 308

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           +  LCK       +++   M  +G  P+V  +  L++ FC  G+  +A  L   M+ +G 
Sbjct: 309 IDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGI 368

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
              V   +VLID   +  ++  A  L E ++Q GC P+VVT T+L+KG       S A  
Sbjct: 369 QPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQ 428

Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
               ++  G  P++V    L+  L + G+   AL+++  +L      D+  +        
Sbjct: 429 LFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNML-----SDTSPY-------- 475

Query: 372 LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
                        G+  + + + Y+ ++   CK G  ++A +L+  M   G  PD  S+ 
Sbjct: 476 -------------GINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYT 522

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            L+ G C + K  +A  ++  +V      +    + ++D L + G+  +A +L    I  
Sbjct: 523 SLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQR 582

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
               + V+YT  ++GL    R  EA  L+ +M+ +   P+  TY  ++   C+  NIK  
Sbjct: 583 GCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTA 642

Query: 552 ----KRLLQDV--IDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
               K++L D        + D  +   +   + K      A     EM  LG+IP+
Sbjct: 643 LELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPN 698



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/353 (25%), Positives = 163/353 (46%), Gaps = 19/353 (5%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG 173
           GC+    T    ++            + F +M + G  PN      +M  L + G + + 
Sbjct: 402 GCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIA 461

Query: 174 IKV----LKETQ------LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMF 223
           +++    L +T        PN +S++I +  LCK       +++   M   G  P+V  +
Sbjct: 462 LELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISY 521

Query: 224 EILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQ 283
             L++ FC+ G+  +A  L   M+ +G    V  ++VLID   +  ++  A  L E M+Q
Sbjct: 522 TSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQ 581

Query: 284 NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
            GC PN VTYT+L+KG       S A      ++  G  PD+V +  L+  L + G+   
Sbjct: 582 RGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKT 641

Query: 344 ALDVYDGLLE------LKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVV 394
           AL+++  +L           PD  ++  ++  +C  GR      L K +  L V  +++ 
Sbjct: 642 ALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVIS 701

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
           Y +L+  FC++G    A  L+N M+D+G   +  ++  ++ G C   +ID+A+
Sbjct: 702 YTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 754


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 154/589 (26%), Positives = 273/589 (46%), Gaps = 48/589 (8%)

Query: 47  ILAPHIVHSTLLNCPSDLIA-LSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGR-FETVR 104
           + +  IV + L N   +  A L FF + +KQ+++  +V+S+  ++ +++R  GR ++  R
Sbjct: 65  VFSDDIVDAVLRNLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSR--GRMYDETR 122

Query: 105 GIVGELARV------GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
             + +L  +      G VI  +   ++    +   ++ M+L+ + E G    T N     
Sbjct: 123 AYLNQLVDLCKFKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKG---LTKNAL--- 176

Query: 159 IVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYP 218
            V D + K GR+            P+  S N  L NL K  +      V   M+R G  P
Sbjct: 177 YVFDNMGKCGRI------------PSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVP 224

Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
           +V M  I++N FCK G++ EA   +  M  LG   ++  +  LI+G+  L  ++ A  + 
Sbjct: 225 DVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVL 284

Query: 279 EKMVQNGCSPNVVTYTSLIKGF-MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
           + M + G S NVVTYT LIKG+  + KM         M E     PD   + VLID   +
Sbjct: 285 KFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCR 344

Query: 338 MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVV 394
            G  DDA+ + D +L L L  + +   SL++  C  G       ++  +    ++ D   
Sbjct: 345 TGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYS 404

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           YN LL  +C+ G  ++A  L + ML +G  P   ++  LL+GLC     D+A+ ++  ++
Sbjct: 405 YNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMM 464

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
               A +   ++ ++D L +      A  L++  +   +    +++   I GL + G+  
Sbjct: 465 KRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMV 524

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI----KMVKRLLQDVIDARIELDYHTS 570
           EA  ++ +MK +   P+  TYR ++  +CK  N+    K+   + ++ I   IE+ Y++ 
Sbjct: 525 EAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEM-YNS- 582

Query: 571 IRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD--------EMWRKLGLLS 611
             L   +FK        + L EM   GL P+        + W K G+L 
Sbjct: 583 --LISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLD 629



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 108/466 (23%), Positives = 223/466 (47%), Gaps = 21/466 (4%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET 180
           T+   L+   R   +   L+ +  M + G  P+    + ++D LFK+   +    + K+ 
Sbjct: 439 TYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDI 498

Query: 181 QLPNF----LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
               F    ++FN  +  LCK+  +   +++   M   G  P+   +  L++ +CK   +
Sbjct: 499 LARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNV 558

Query: 237 AEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSL 296
            +A+++ G M     S S+  +  LI G  + RRL     L  +M   G +PN+VTY +L
Sbjct: 559 GQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGAL 618

Query: 297 IKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
           I G+ +  M   AFS    +   G + +++  + ++  L ++G  D+A  +   +++   
Sbjct: 619 IDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGF 678

Query: 357 VPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE------ADLVVYNALLSYFCKAGFPNQ 410
            PD    C L S +    R++ + K+   L+         + +VYN  ++  CK G  + 
Sbjct: 679 FPDHE--CFLKSDI----RYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDD 732

Query: 411 AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
           A + ++ +  KGF PDN+++  L+ G   A  +DEA  +   ++      N   + A+++
Sbjct: 733 ARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALIN 792

Query: 471 RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
            L ++    +A +LF +   +    +VV+Y   I G  + G  + A+ L  +M    + P
Sbjct: 793 GLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISP 852

Query: 531 NAYTYRVMLLSFCK----ERNIKMVKRLLQDVIDARIELDYHTSIR 572
           +  TY  ++   CK    ER++K++ ++++  +D+++ ++Y T ++
Sbjct: 853 SVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKL-IEYCTLVQ 897



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/391 (23%), Positives = 173/391 (44%), Gaps = 16/391 (4%)

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ-----LPNFLSFNIALCNLCKLN 199
           M   G + N     +++    K  ++D   KVL+  Q     +P+  ++ + +   C+  
Sbjct: 287 MSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTG 346

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
            + +   ++  M+R G   N+ +   L+N +CK G I EA  ++  M+         ++ 
Sbjct: 347 KIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYN 406

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
            L+DG+ R      A  L +KM+Q G  P V+TY +L+KG      F  A     ++   
Sbjct: 407 TLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKR 466

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR---- 375
           G APD V ++ L+D L KM +++ A  ++  +L         TF +++S +C  G+    
Sbjct: 467 GVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEA 526

Query: 376 ---FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
              F  +  L C      D + Y  L+  +CKA    QA K+   M  +  +P    +  
Sbjct: 527 EEIFDKMKDLGC----SPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNS 582

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           L+ GL  +R++ E  ++   + +     N   + A++D   + G   KA   +       
Sbjct: 583 LISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENG 642

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQM 523
              +++  +  + GL   GR +EA +L  +M
Sbjct: 643 LSANIIICSTMVSGLYRLGRIDEANLLMQKM 673



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 98/395 (24%), Positives = 185/395 (46%), Gaps = 13/395 (3%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNL 195
           E FD+M   G +P+      ++D   K   V    KV     +E   P+   +N  +  L
Sbjct: 528 EIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGL 587

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
            K   +  V D++  M  +G  PN+  +  L++ +CK G + +A+     M   G S ++
Sbjct: 588 FKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANI 647

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
              + ++ G  RL R+D A  L +KMV +G  P+   +  L      A +  IA S LD 
Sbjct: 648 IICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECF--LKSDIRYAAIQKIADS-LDE 704

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
                  P+ + +N+ I  L K G  DDA   +  L     VPD++T+C+L+     +G 
Sbjct: 705 SCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGN 764

Query: 376 ----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
               F L  +++    +  ++V YNAL++  CK+   ++A +L++ +  KG  P+  ++ 
Sbjct: 765 VDEAFRLRDEML-RRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYN 823

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            L+ G C    +D A  +   ++    + +   ++A+++ L + G   ++++L  + I  
Sbjct: 824 TLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKA 883

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
                ++ Y   ++G +  G  ++ + LY  M HI
Sbjct: 884 GVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMM-HI 917



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 84/377 (22%), Positives = 174/377 (46%), Gaps = 14/377 (3%)

Query: 52  IVHSTLLN--CPSDLIALSFFIWCAKQRDYFH-DVQSFDHMISVVTRLTGRFETVRGIVG 108
           I + TL++  C +  +  +F +  A +R+     ++ ++ +IS + + + R   V  ++ 
Sbjct: 543 ITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFK-SRRLVEVTDLLT 601

Query: 109 ELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIG 168
           E+   G      T+   +  + +  M      ++ EM   G + N    + ++  L+++G
Sbjct: 602 EMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLG 661

Query: 169 RVD----LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFE 224
           R+D    L  K++     P+   F   L +  +   +  + D +    +    PN  ++ 
Sbjct: 662 RIDEANLLMQKMVDHGFFPDHECF---LKSDIRYAAIQKIADSLDESCKTFLLPNNIVYN 718

Query: 225 ILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN 284
           I +   CK G++ +A +   ++   G       +  LI G+     +D A  L ++M++ 
Sbjct: 719 IAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRR 778

Query: 285 GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
           G  PN+VTY +LI G  +++    A      L  +G  P++V +N LID   K+G+ D A
Sbjct: 779 GLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAA 838

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSY 401
             + D ++E  + P   T+ +L++ +C  G      KL+  +    V++ L+ Y  L+  
Sbjct: 839 FKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQG 898

Query: 402 FCKAGFPNQAVKLYNTM 418
           + ++G   +  KLY+ M
Sbjct: 899 YIRSGEMQKIHKLYDMM 915


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 154/589 (26%), Positives = 273/589 (46%), Gaps = 48/589 (8%)

Query: 47  ILAPHIVHSTLLNCPSDLIA-LSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGR-FETVR 104
           + +  IV + L N   +  A L FF + +KQ+++  +V+S+  ++ +++R  GR ++  R
Sbjct: 65  VFSDDIVDAVLRNLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSR--GRMYDETR 122

Query: 105 GIVGELARV------GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
             + +L  +      G VI  +   ++    +   ++ M+L+ + E G    T N     
Sbjct: 123 AYLNQLVDLCKFKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKG---LTKNAL--- 176

Query: 159 IVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYP 218
            V D + K GR+            P+  S N  L NL K  +      V   M+R G  P
Sbjct: 177 YVFDNMGKCGRI------------PSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVP 224

Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
           +V M  I++N FCK G++ EA   +  M  LG   ++  +  LI+G+  L  ++ A  + 
Sbjct: 225 DVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVL 284

Query: 279 EKMVQNGCSPNVVTYTSLIKGF-MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
           + M + G S NVVTYT LIKG+  + KM         M E     PD   + VLID   +
Sbjct: 285 KFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCR 344

Query: 338 MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVV 394
            G  DDA+ + D +L L L  + +   SL++  C  G       ++  +    ++ D   
Sbjct: 345 TGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYS 404

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           YN LL  +C+ G  ++A  L + ML +G  P   ++  LL+GLC     D+A+ ++  ++
Sbjct: 405 YNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMM 464

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
               A +   ++ ++D L +      A  L++  +   +    +++   I GL + G+  
Sbjct: 465 KXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMV 524

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI----KMVKRLLQDVIDARIELDYHTS 570
           EA  ++ +MK +   P+  TYR ++  +CK  N+    K+   + ++ I   IE+ Y++ 
Sbjct: 525 EAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEM-YNS- 582

Query: 571 IRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD--------EMWRKLGLLS 611
             L   +FK        + L EM   GL P+        + W K G+L 
Sbjct: 583 --LISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLD 629



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 118/517 (22%), Positives = 245/517 (47%), Gaps = 26/517 (5%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET 180
           T+   L+   R   +   L+ +  M + G  P+    + ++D LFK+   +    + K+ 
Sbjct: 439 TYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDI 498

Query: 181 QLPNF----LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
               F    ++FN  +  LCK+  +   +++   M   G  P+   +  L++ +CK   +
Sbjct: 499 LARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNV 558

Query: 237 AEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSL 296
            +A+++ G M     S S+  +  LI G  + RRL     L  +M   G +PN+VTY +L
Sbjct: 559 GQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGAL 618

Query: 297 IKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
           I G+ +  M   AFS    +   G + +++  + ++  L ++G  D+A  +   +++   
Sbjct: 619 IDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGF 678

Query: 357 VPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE------ADLVVYNALLSYFCKAGFPNQ 410
            PD    C L S +    R++ + K+   L+         + +VYN  ++  CK G  + 
Sbjct: 679 FPDHE--CFLKSDI----RYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDD 732

Query: 411 AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
           A + ++ +  KGF PDN+++  L+ G   A  +DEA  +   ++      N   + A+++
Sbjct: 733 ARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALIN 792

Query: 471 RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
            L ++    +A +LF +   +    +VV+Y   I G  + G  + A+ L  +M    + P
Sbjct: 793 GLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISP 852

Query: 531 NAYTYRVMLLSFCK----ERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSA 586
           +  TY  ++   CK    ER++K++ ++++  +D+++ ++Y T ++   F    ++  S 
Sbjct: 853 SVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKL-IEYCTLVQ-GGFKTSNYNEMSK 910

Query: 587 VNQLVEMCNLGLIP--DEMWRKLGLLSDETMTPVSLF 621
              L +  N  L+P     W+ +G+++ +   P+ +F
Sbjct: 911 PEALKQNMNCFLLPKFKHSWKFVGVVALD--CPIRIF 945



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/391 (23%), Positives = 173/391 (44%), Gaps = 16/391 (4%)

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ-----LPNFLSFNIALCNLCKLN 199
           M   G + N     +++    K  ++D   KVL+  Q     +P+  ++ + +   C+  
Sbjct: 287 MSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTG 346

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
            + +   ++  M+R G   N+ +   L+N +CK G I EA  ++  M+         ++ 
Sbjct: 347 KIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYN 406

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
            L+DG+ R      A  L +KM+Q G  P V+TY +L+KG      F  A     ++   
Sbjct: 407 TLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKX 466

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR---- 375
           G APD V ++ L+D L KM +++ A  ++  +L         TF +++S +C  G+    
Sbjct: 467 GVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEA 526

Query: 376 ---FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
              F  +  L C      D + Y  L+  +CKA    QA K+   M  +  +P    +  
Sbjct: 527 EEIFDKMKDLGC----SPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNS 582

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           L+ GL  +R++ E  ++   + +     N   + A++D   + G   KA   +       
Sbjct: 583 LISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENG 642

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQM 523
              +++  +  + GL   GR +EA +L  +M
Sbjct: 643 LSANIIICSTMVSGLYRLGRIDEANLLMQKM 673



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 83/385 (21%), Positives = 175/385 (45%), Gaps = 28/385 (7%)

Query: 52  IVHSTLLN--CPSDLIALSFFIWCAKQRDYFH-DVQSFDHMISVVTRLTGRFETVRGIVG 108
           I + TL++  C +  +  +F +  A +R+     ++ ++ +IS + + + R      ++ 
Sbjct: 543 ITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFK-SRRLVEXTDLLT 601

Query: 109 ELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIG 168
           E+   G      T+   +  + +  M      ++ EM   G + N    + ++  L+++G
Sbjct: 602 EMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLG 661

Query: 169 RVD----LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFE 224
           R+D    L  K++     P+   F   L +  +   +  + D +    +    PN  ++ 
Sbjct: 662 RIDEANLLMQKMVDHGFFPDHECF---LKSDIRYAAIQKIADSLDESCKTFLLPNNIVYN 718

Query: 225 ILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN 284
           I +   CK G++ +A +   ++   G       +  LI G+     +D A  L ++M++ 
Sbjct: 719 IAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRR 778

Query: 285 GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
           G  PN+VTY +LI G  +++    A      L  +G  P++V +N LID   K+G+ D A
Sbjct: 779 GLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAA 838

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCK 404
             + D ++E  + P   T+ +L++ +C  G            ++E  + + N ++    K
Sbjct: 839 FKLKDKMIEEGISPSVVTYSALINGLCKHG------------DIERSMKLLNQMI----K 882

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYS 429
           AG  ++ ++ Y T++  GF   NY+
Sbjct: 883 AGVDSKLIE-YCTLVQGGFKTSNYN 906


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 127/449 (28%), Positives = 208/449 (46%), Gaps = 25/449 (5%)

Query: 184 NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
           N +++ I +  LCK N +         M +KG  PN   + +L+N FCK+ ++  AY LL
Sbjct: 6   NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
             M   G + +V  ++ +I GF R  ++D A  L+ +MV+NGC PN+VTY +L+ G    
Sbjct: 66  KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRN 125

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
            +   A+  LD +   G  PD   ++ L+  L K G  D AL V++        PD   +
Sbjct: 126 GLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAY 185

Query: 364 CSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
            +L++ +C +GR     KL   +     E D+V + AL+   CK     +A ++  TM D
Sbjct: 186 STLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMED 245

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
           +  TP+  ++  L+ GLC   ++ +A  V++ +++     N   + +++           
Sbjct: 246 RNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDS 305

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
           A+ L           D+++Y   I GL + GR  EA  L+  MK     P+  TY  ++ 
Sbjct: 306 ALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIG 365

Query: 541 SFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVE-MCNLGLI 599
            FCK   I M + L  D++   +  D  T                  + LVE  CN GL+
Sbjct: 366 GFCKLERIDMARTLFDDMLKQAVLPDVVT-----------------FSTLVEGYCNAGLV 408

Query: 600 PD-EMWRKLGLLSD---ETMTPVSLFDGF 624
            D E   +  + SD   +  T  SL DGF
Sbjct: 409 DDAERLLEEMVASDCSPDVYTYTSLVDGF 437



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 126/498 (25%), Positives = 230/498 (46%), Gaps = 42/498 (8%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           K+     +V ++  +I    R T + +T   +  ++   GC+    T+   L    R  +
Sbjct: 69  KESGLAPNVVTYSTVIHGFCRQT-KVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGL 127

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNI 190
                E  DEM   G  P+ F+ + +M  L K G++D+ +KV ++       P+ ++++ 
Sbjct: 128 MDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYST 187

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +  LCK   +     +   M      P+V  F  L++  CK  R+ EA Q+L  M    
Sbjct: 188 LIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN 247

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
            + +V  ++ LIDG  +  ++  A  ++++M+  G  PNVVTY SLI GF        A 
Sbjct: 248 CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSAL 307

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
             ++ + + G  PD++ +N LID L K G   +A  ++ G ++ K       FC+     
Sbjct: 308 LLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLF-GDMKAK-------FCN----- 354

Query: 371 CLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
                               D++ Y+ L+  FCK    + A  L++ ML +   PD  +F
Sbjct: 355 -------------------PDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTF 395

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             L+ G C A  +D+A  + + +V ++ + + + +T++VD   + GR  +A ++ +R   
Sbjct: 396 STLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAK 455

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
                +VV+YT  I      G+   AY L  +M    V PN  TYR ++  FC   +++ 
Sbjct: 456 RGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEE 515

Query: 551 VKRLLQDVIDARIELDYH 568
            +++L+     R+E D +
Sbjct: 516 ARKMLE-----RLERDEN 528



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 186/413 (45%), Gaps = 9/413 (2%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           F++M      P+      +MD L K  R+    +VL+  +     PN ++++  +  LCK
Sbjct: 205 FEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCK 264

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              V + ++V   M+ +G  PNV  +  L++ FC    +  A  L+  M   G    +  
Sbjct: 265 TGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIIT 324

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  LIDG  +  R   A  L+  M    C+P+V+TY+ LI GF + +   +A +  D + 
Sbjct: 325 YNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDML 384

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF- 376
            +   PD+V  + L++     G  DDA  + + ++     PD YT+ SL+   C  GR  
Sbjct: 385 KQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMV 444

Query: 377 --SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
               + K +     + ++V Y AL+  FC+AG P  A KL   M+  G  P+  ++  L+
Sbjct: 445 EARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLI 504

Query: 435 RGLCGARKIDEAINVYQGIVMN-NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
            G CG   ++EA  + + +  + N   +   +  ++D L   GR   A++L         
Sbjct: 505 GGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGT 564

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMK-HIAVPPNAYTYRVMLLSFCKE 545
           P     Y   IRGL +G    +A  +  +M       PNA  Y  ++    +E
Sbjct: 565 PPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELARE 617



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/456 (23%), Positives = 214/456 (46%), Gaps = 12/456 (2%)

Query: 78  DYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGM 137
           D   DV ++  +I+ + + TGR +    +  ++    C     TF   +    +G+    
Sbjct: 177 DCPPDVVAYSTLIAGLCK-TGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQE 235

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALC 193
             +  + M     TPN    + ++D L K G+V    +V K   +    PN +++N  + 
Sbjct: 236 AQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIH 295

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
             C  N V +   ++  M   G  P++  +  L++  CK GR  EA +L G M     + 
Sbjct: 296 GFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNP 355

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
            V  ++ LI GF +L R+DMA  L++ M++    P+VVT+++L++G+  A +   A   L
Sbjct: 356 DVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLL 415

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           + + +   +PD+  +  L+D   K+G   +A  V   + +    P+  T+ +L+   C +
Sbjct: 416 EEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRA 475

Query: 374 GR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM-LDKGFTPDNY 428
           G+    + LL ++V G  V+ +++ Y +L+  FC  G   +A K+   +  D+    D +
Sbjct: 476 GKPTVAYKLLEEMV-GNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMF 534

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR- 487
           ++  ++ GLC   ++  A+ + + I  +       ++ A++  L +     KA+++    
Sbjct: 535 AYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEM 594

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM 523
            +  K   +  +Y   I+ L   GR EEA  L  ++
Sbjct: 595 TLSRKSRPNAEAYEAVIQELAREGRHEEANALADEL 630



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 152/320 (47%), Gaps = 5/320 (1%)

Query: 286 CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL 345
           C  NV+T+T +I G  +A     A ++   ++ +G  P+   +NVLI+   K+     A 
Sbjct: 3   CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 62

Query: 346 DVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE----ADLVVYNALLSY 401
            +   + E  L P+  T+ +++   C   +     KL   + VE     +LV YN LLS 
Sbjct: 63  LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQM-VENGCMPNLVTYNTLLSG 121

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVN 461
            C+ G  ++A +L + M ++G  PD +S+  L+ GLC   KID A+ V++     +   +
Sbjct: 122 LCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPD 181

Query: 462 AHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYS 521
              ++ ++  L + GR  +A +LF +        DVV++T  + GL +G R +EA  +  
Sbjct: 182 VVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLE 241

Query: 522 QMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFH 581
            M+     PN  TY  ++   CK   ++  + + + +I   IE +  T   L       +
Sbjct: 242 TMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTN 301

Query: 582 SSSSAVNQLVEMCNLGLIPD 601
              SA+  + EM   G +PD
Sbjct: 302 GVDSALLLMEEMTATGCLPD 321



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/172 (22%), Positives = 81/172 (47%)

Query: 386 LEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
           +E E +++ +  ++   CKA    +A   +  M  KG  P+ +++  L+ G C   K+  
Sbjct: 1   MECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHR 60

Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
           A  + + +  +  A N   ++ ++       +   A +LFR+ +      ++V+Y   + 
Sbjct: 61  AYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLS 120

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
           GL   G  +EAY L  +M+   + P+ ++Y  ++   CK   I M  ++ +D
Sbjct: 121 GLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFED 172


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 142/601 (23%), Positives = 258/601 (42%), Gaps = 43/601 (7%)

Query: 12  TAQRTQILKTIISFKSIH----QISSPK---VCATTHQDFPIILAPHIVHSTLLNCPSDL 64
           +A   +    +ISF S H    Q  SP    +  +     P    P  +   L     + 
Sbjct: 27  SAHNCKPFSKLISFTSTHHHDQQAVSPSFSTLSPSPTTQLPQNFTPKQLRDALRRQSDED 86

Query: 65  IALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLL 124
             L    W +KQ ++      ++ ++  + +  G F ++R ++ E+   GC I+  TFL+
Sbjct: 87  SILDLLDWASKQPNFVPSSVIYEEVLRKLGK-DGSFGSMRRVLQEMKHTGCEIRRGTFLI 145

Query: 125 FLRIYWRGEMYGMVLEAFDEMGR-FGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP 183
            +  Y + E++   +   D M   FG   + F  N +++VL     VD            
Sbjct: 146 LIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVL-----VD------------ 188

Query: 184 NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
                     N  KL ++ N +     MV +G  P+V  F IL+   C+  +I  A  ++
Sbjct: 189 ---------GNKLKLVEIVNSR-----MVSRGIKPDVTTFNILIKALCRAHQIRPAILMM 234

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
             M + G S     +T L+ GF     ++ A  + E+MV  GC  + VT   L+ G+ + 
Sbjct: 235 EEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKE 294

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
                  SF+D + +EG  PD    N L++ L ++G    AL++ D +L+    PD +T+
Sbjct: 295 GRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTY 354

Query: 364 CSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
            SL+  +C  G      +++  +   +   + V YN L+S  CK     +A +L   +  
Sbjct: 355 NSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTS 414

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
           KG  PD  +F  L++GLC       A+ +++ +       +   +  ++D L   GR  +
Sbjct: 415 KGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEE 474

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
           A+ L +         +VV+Y   I G  +  R EEA  ++ +M+   +  N  TY  ++ 
Sbjct: 475 ALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLID 534

Query: 541 SFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
             CK R ++   +L+  ++   ++ D  T   L  +  +      A + +  M + G  P
Sbjct: 535 GLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEP 594

Query: 601 D 601
           D
Sbjct: 595 D 595



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 120/463 (25%), Positives = 218/463 (47%), Gaps = 12/463 (2%)

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           I  ++   GC     T  + +  Y +      VL   DEM   GF P+ F  N +++ L 
Sbjct: 268 IREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLC 327

Query: 166 KIGRVDLGIKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
           +IG V   +++L    +E   P+  ++N  +  LCKL +V    +++  M+ + F PN  
Sbjct: 328 RIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTV 387

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            +  L++  CK  ++ EA +L  ++ + G    V  +  LI G        +A  L+E+M
Sbjct: 388 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEM 447

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
              GC P+  TY  LI           A S L  +ES G + ++V +N LID   K    
Sbjct: 448 KTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRI 507

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNAL 398
           ++A +++D +    +  +  T+ +L+  +C + R     +L+  + +E    D   YN+L
Sbjct: 508 EEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSL 567

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           L+YFC+AG   +A  +  TM   G  PD+ ++  L+ GL  A +++ A  + + + +   
Sbjct: 568 LTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGM 627

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE-GGRTEEAY 517
            +    +  ++  L    R  +A++LFR  + +  P D V+Y V  RGL   GG   EA 
Sbjct: 628 VLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAV 687

Query: 518 ILYSQMKHIAVPPNAYTYRVMLLSFC----KERNIKMVKRLLQ 556
               +M      P+  ++ ++    C    ++  IK+V R+++
Sbjct: 688 DFLVEMTDKGFLPDFSSFLMLAEGLCALSMEDTLIKLVNRVMK 730


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 154/589 (26%), Positives = 273/589 (46%), Gaps = 48/589 (8%)

Query: 47  ILAPHIVHSTLLNCPSDLIA-LSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGR-FETVR 104
           + +  IV + L N   +  A L FF + +KQ+++  +V+S+  ++ +++R  GR ++  R
Sbjct: 31  VFSDDIVDAVLRNLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSR--GRMYDETR 88

Query: 105 GIVGELARV------GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
             + +L  +      G VI  +   ++    +   ++ M+L+ + E G    T N     
Sbjct: 89  AYLNQLVDLCKFKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKG---LTKNAL--- 142

Query: 159 IVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYP 218
            V D + K GR+            P+  S N  L NL K  +      V   M+R G  P
Sbjct: 143 YVFDNMGKCGRI------------PSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVP 190

Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
           +V M  I++N FCK G++ EA   +  M  LG   ++  +  LI+G+  L  ++ A  + 
Sbjct: 191 DVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVL 250

Query: 279 EKMVQNGCSPNVVTYTSLIKGF-MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
           + M + G S NVVTYT LIKG+  + KM         M E     PD   + VLID   +
Sbjct: 251 KFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCR 310

Query: 338 MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVV 394
            G  DDA+ + D +L L L  + +   SL++  C  G       ++  +    ++ D   
Sbjct: 311 TGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYS 370

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           YN LL  +C+ G  ++A  L + ML +G  P   ++  LL+GLC     D+A+ ++  ++
Sbjct: 371 YNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMM 430

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
               A +   ++ ++D L +      A  L++  +   +    +++   I GL + G+  
Sbjct: 431 KRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMV 490

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI----KMVKRLLQDVIDARIELDYHTS 570
           EA  ++ +MK +   P+  TYR ++  +CK  N+    K+   + ++ I   IE+ Y++ 
Sbjct: 491 EAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEM-YNS- 548

Query: 571 IRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD--------EMWRKLGLLS 611
             L   +FK        + L EM   GL P+        + W K G+L 
Sbjct: 549 --LISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLD 595



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 100/422 (23%), Positives = 198/422 (46%), Gaps = 18/422 (4%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET 180
           T+   L+   R   +   L+ +  M + G  P+    + ++D LFK+   +    + K+ 
Sbjct: 405 TYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDI 464

Query: 181 QLPNF----LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
               F    ++FN  +  LCK+  +   +++   M   G  P+   +  L++ +CK   +
Sbjct: 465 LARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNV 524

Query: 237 AEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSL 296
            +A+++ G M     S S+  +  LI G  + RRL     L  +M   G +PN+VTY +L
Sbjct: 525 GQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGAL 584

Query: 297 IKGFMEAKMFSIAF-SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           I G+ +  M   AF S+ +M E+ G + +++  + ++  L ++G  D+A  +   +++  
Sbjct: 585 IDGWCKEGMLDKAFSSYFEMTEN-GLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHG 643

Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADL------VVYNALLSYFCKAGFPN 409
             PD    C L S +    R++ + K+   L+           +VYN  ++  CK G  +
Sbjct: 644 FFPDHE--CFLKSDI----RYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVD 697

Query: 410 QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
            A + ++ +  KGF PDN+++  L+ G   A  +DEA  +   ++      N   + A++
Sbjct: 698 DARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALI 757

Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
           + L ++    +A +LF +   +    +VV+Y   I G  + G  + A+ L  +M    + 
Sbjct: 758 NGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGIS 817

Query: 530 PN 531
           P+
Sbjct: 818 PS 819



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 117/537 (21%), Positives = 215/537 (40%), Gaps = 81/537 (15%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRG---EMYGMVLEAFDEMGRFGFTPNT 154
           G  E  +G++  ++  G      T+ L ++ Y +    +    VL    E       P+ 
Sbjct: 241 GDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEA--ALVPDE 298

Query: 155 FARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCN-----LCKLNDVSNVKDVIG 209
            A  +++D   + G++D  +++L E  L   L  N+ +CN      CK  ++   + VI 
Sbjct: 299 RAYGVLIDGYCRTGKIDDAVRLLDE-MLRLGLKTNLFICNSLINGYCKRGEIHEAEGVIT 357

Query: 210 MMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLR 269
            MV     P+   +  LL+ +C+ G  +EA+ L   M+  G   +V  +  L+ G  R+ 
Sbjct: 358 RMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVG 417

Query: 270 RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHN 329
             D A  +W  M++ G +P+ V Y++L+ G  + + F  A +    + + G     +  N
Sbjct: 418 AFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFN 477

Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC------------------ 371
            +I  L KMG   +A +++D + +L   PD  T+ +L+   C                  
Sbjct: 478 TMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMERE 537

Query: 372 -LSGRFSLLPKLVCGL-------------------EVEADLVVYNALLSYFCKAGFPNQA 411
            +S    +   L+ GL                    +  ++V Y AL+  +CK G  ++A
Sbjct: 538 PISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKA 597

Query: 412 VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV---------------MN 456
              Y  M + G + +      ++ GL    +IDEA  + Q +V               + 
Sbjct: 598 FSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIR 657

Query: 457 NPAV-----------------NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
             A+                 N  V+   +  L + G+   A + F    ++ +  D  +
Sbjct: 658 YAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFT 717

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
           Y   I G    G  +EA+ L  +M    + PN  TY  ++   CK  N+   +RL  
Sbjct: 718 YCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFH 774



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/313 (22%), Positives = 137/313 (43%), Gaps = 40/313 (12%)

Query: 52  IVHSTLLN--CPSDLIALSFFIWCAKQRDYFH-DVQSFDHMISVVTRLTGRFETVRGIVG 108
           I + TL++  C +  +  +F +  A +R+     ++ ++ +IS + + + R   V  ++ 
Sbjct: 509 ITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFK-SRRLVEVTDLLT 567

Query: 109 ELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIG 168
           E+   G      T+   +  + +  M      ++ EM   G + N    + ++  L+++G
Sbjct: 568 EMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLG 627

Query: 169 RVD----------------------------LGIKVLKETQ--------LPNFLSFNIAL 192
           R+D                              I+ + ++         LPN + +NIA+
Sbjct: 628 RIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAI 687

Query: 193 CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
             LCK   V + +    M+  KGF P+   +  L++ +   G + EA++L   M+  G  
Sbjct: 688 AGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLV 747

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
            ++  +  LI+G  +   +D A  L+ K+ Q G  PNVVTY +LI G+ +      AF  
Sbjct: 748 PNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKL 807

Query: 313 LDMLESEGHAPDL 325
            D +  EG +P +
Sbjct: 808 KDKMIEEGISPSI 820


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 132/558 (23%), Positives = 265/558 (47%), Gaps = 16/558 (2%)

Query: 55  STLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVG 114
           + L   P    AL        + D+    + ++ +I  +  + G  + ++ +V E+ R G
Sbjct: 46  TALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAV-GALDLMKVLVAEMRREG 104

Query: 115 CVIKAQTFLLFLRIYWRGEMYG----MVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV 170
             +K      FL  Y   +++     ++L     +  FG   +T   N +++VL +  ++
Sbjct: 105 HQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPL--FGIQADTVVYNHLLNVLVEGSKM 162

Query: 171 DLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEIL 226
            L   V  E       P+ ++FN  +  LC+ + V     ++  M  +G  P+   F  L
Sbjct: 163 KLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTL 222

Query: 227 LNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL-DMAGYLWEKMVQNG 285
           +  F + G I  A ++   M+ +G S +     VLI+G+ +L R+ D  GY+ ++ + +G
Sbjct: 223 MQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQE-IADG 281

Query: 286 CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL 345
             P+ +TY + + G  +      A   +D++  EGH PD+  +N++++CL K G  ++A 
Sbjct: 282 FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAK 341

Query: 346 DVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL---LPKLVCGLEVEADLVVYNALLSYF 402
            + + +++   +PD  TF +L++ +C   R      L + V    V  D+  +N L++  
Sbjct: 342 GILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINAL 401

Query: 403 CKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNA 462
           CK G P+ A++L+  M + G TPD  ++  L+  LC   K+ +A+++ + +       + 
Sbjct: 402 CKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRST 461

Query: 463 HVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQ 522
             +  I+D L +  R  +A ++F +  ++    + +++   I GL +  + ++A+ L +Q
Sbjct: 462 ITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQ 521

Query: 523 MKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHS 582
           M    + PN  TY  +L  +CK+ +IK    +L+ +     E+D  T   L   + K   
Sbjct: 522 MISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGR 581

Query: 583 SSSAVNQLVEMCNLGLIP 600
           +  A+  L  M   G+ P
Sbjct: 582 TQVALKVLRGMRIKGMRP 599



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/532 (20%), Positives = 227/532 (42%), Gaps = 17/532 (3%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D   ++H+++V+     + + +  +  E+   G      TF   ++   R       +  
Sbjct: 145 DTVVYNHLLNVLVE-GSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIM 203

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCK 197
            +EM   G  P+      +M    + G ++  ++V    L+       ++ N+ +   CK
Sbjct: 204 LEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCK 263

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
           L  V +    I   +  GF P+   +   +N  C+   +  A +++ +M+  G    V  
Sbjct: 264 LGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFT 323

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           + ++++   +  +L+ A  +  +MV  GC P++ T+ +LI           A      + 
Sbjct: 324 YNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVT 383

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
            +G +PD+   N+LI+ L K+G    AL +++ +      PD  T+ +L+  +C  G+  
Sbjct: 384 VKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLG 443

Query: 378 LLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
               L+  +E        + YN ++   CK     +A ++++ M  +G + +  +F  L+
Sbjct: 444 KALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLI 503

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            GLC  +KID+A  +   ++      N   + +I+    + G   KA  +        + 
Sbjct: 504 DGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFE 563

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
           +DVV+Y   I GL + GRT+ A  +   M+   + P    Y  +L S  +  NI+    L
Sbjct: 564 VDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSL 623

Query: 555 LQDVIDARIELDYHTSIRLTKFIFK-----FHSSSSAVNQLVEMCNLGLIPD 601
            +++ +     D  T     K +F+           A + ++EM + G IP+
Sbjct: 624 FREMAEVGEPPDALTY----KIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPE 671



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 97/399 (24%), Positives = 182/399 (45%), Gaps = 14/399 (3%)

Query: 51  HIVHSTLLN--CPSDLIALSFFIW-CAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIV 107
            I ++T +N  C +D +  +  +     Q  +  DV +++ +++ + +  G+ E  +GI+
Sbjct: 286 QITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCK-NGQLEEAKGIL 344

Query: 108 GELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKI 167
            ++   GC+    TF   +     G      L+   ++   G +P+ +  NI+++ L K+
Sbjct: 345 NQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKV 404

Query: 168 GRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMF 223
           G   L +++ +E +     P+ +++N  + NLC L  +    D++  M   G   +   +
Sbjct: 405 GDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITY 464

Query: 224 EILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQ 283
             +++  CK  RI EA ++   M   G S +   +  LIDG  + +++D A  L  +M+ 
Sbjct: 465 NTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMIS 524

Query: 284 NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
            G  PN +TY S++  + +      A   L+ + + G   D+V +  LI+ L K G    
Sbjct: 525 EGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQV 584

Query: 344 ALDVYDGLL--ELKLVPDSYT--FCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALL 399
           AL V  G+    ++  P +Y     SL     +    SL  ++    E   D + Y  + 
Sbjct: 585 ALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGE-PPDALTYKIVF 643

Query: 400 SYFCKAGFP-NQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
              C+ G P  +A      M+DKGF P+  SF  L  GL
Sbjct: 644 RGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGL 682



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 82/398 (20%), Positives = 151/398 (37%), Gaps = 40/398 (10%)

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           + R  F P   ++E ++     +G +     L+  M   G  + +      +D +   + 
Sbjct: 65  LARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQL 124

Query: 271 LDMAGYLWEKMVQN--GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH 328
            D A  L    +Q   G   + V Y  L+   +E     +  S    + + G  PD+V  
Sbjct: 125 FDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTF 184

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCG 385
           N L+  L +      A+ + + +    + PD  TF +L+      G      ++   +  
Sbjct: 185 NTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLE 244

Query: 386 LEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
           +   A  V  N L++ +CK G    A+      +  GF PD  ++   + GLC    +  
Sbjct: 245 MGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGH 304

Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
           A+ V   +V      +   +  +V+ L + G+  +A  +  + +      D+ ++   I 
Sbjct: 305 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIA 364

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
            L  G R EEA  L  Q+    V P+ YT+ +++ + CK                     
Sbjct: 365 ALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVG------------------- 405

Query: 566 DYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           D H ++RL +                EM N G  PDE+
Sbjct: 406 DPHLALRLFE----------------EMKNSGCTPDEV 427


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 132/558 (23%), Positives = 265/558 (47%), Gaps = 16/558 (2%)

Query: 55  STLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVG 114
           + L   P    AL        + D+    + ++ +I  +  + G  + ++ +V E+ R G
Sbjct: 46  TALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAV-GALDLMKVLVAEMRREG 104

Query: 115 CVIKAQTFLLFLRIYWRGEMYG----MVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV 170
             +K      FL  Y   +++     ++L     +  FG   +T   N +++VL +  ++
Sbjct: 105 HQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPL--FGIQADTVVYNHLLNVLVEGSKM 162

Query: 171 DLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEIL 226
            L   V  E       P+ ++FN  +  LC+ + V     ++  M  +G  P+   F  L
Sbjct: 163 KLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTL 222

Query: 227 LNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL-DMAGYLWEKMVQNG 285
           +  F + G I  A ++   M+ +G S +     VLI+G+ +L R+ D  GY+ ++ + +G
Sbjct: 223 MQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQE-IADG 281

Query: 286 CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL 345
             P+ +TY + + G  +      A   +D++  EGH PD+  +N++++CL K G  ++A 
Sbjct: 282 FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAK 341

Query: 346 DVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL---LPKLVCGLEVEADLVVYNALLSYF 402
            + + +++   +PD  TF +L++ +C   R      L + V    V  D+  +N L++  
Sbjct: 342 GILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINAL 401

Query: 403 CKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNA 462
           CK G P+ A++L+  M + G TPD  ++  L+  LC   K+ +A+++ + +       + 
Sbjct: 402 CKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRST 461

Query: 463 HVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQ 522
             +  I+D L +  R  +A ++F +  ++    + +++   I GL +  + ++A+ L +Q
Sbjct: 462 ITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQ 521

Query: 523 MKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHS 582
           M    + PN  TY  +L  +CK+ +IK    +L+ +     E+D  T   L   + K   
Sbjct: 522 MISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGR 581

Query: 583 SSSAVNQLVEMCNLGLIP 600
           +  A+  L  M   G+ P
Sbjct: 582 TQVALKVLRGMRIKGMRP 599



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 111/532 (20%), Positives = 227/532 (42%), Gaps = 17/532 (3%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D   ++H+++V+     + + +  +  E+   G      TF   ++   R       +  
Sbjct: 145 DTVVYNHLLNVLVE-GSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLM 203

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCK 197
            +EM   G  P+      +M    + G ++  ++V    L+       ++ N+ +   CK
Sbjct: 204 LEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCK 263

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
           L  V +    I   +  GF P+   +   +N  C+   +  A +++ +M+  G    V  
Sbjct: 264 LGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFT 323

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           + ++++   +  +L+ A  +  +MV  GC P++ T+ +LI           A      + 
Sbjct: 324 YNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVT 383

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
            +G +PD+   N+LI+ L K+G    AL +++ +      PD  T+ +L+  +C  G+  
Sbjct: 384 VKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLG 443

Query: 378 LLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
               L+  +E        + YN ++   CK     +A ++++ M  +G + +  +F  L+
Sbjct: 444 KALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLI 503

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            GLC  +KID+A  +   ++      N   + +I+    + G   KA  +        + 
Sbjct: 504 DGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFE 563

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
           +DVV+Y   I GL + GRT+ A  +   M+   + P    Y  +L S  +  NI+    L
Sbjct: 564 VDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSL 623

Query: 555 LQDVIDARIELDYHTSIRLTKFIFK-----FHSSSSAVNQLVEMCNLGLIPD 601
            +++ +     D  T     K +F+           A + ++EM + G IP+
Sbjct: 624 FREMAEVGEPPDALTY----KIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPE 671



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 97/399 (24%), Positives = 182/399 (45%), Gaps = 14/399 (3%)

Query: 51  HIVHSTLLN--CPSDLIALSFFIW-CAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIV 107
            I ++T +N  C +D +  +  +     Q  +  DV +++ +++ + +  G+ E  +GI+
Sbjct: 286 QITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCK-NGQLEEAKGIL 344

Query: 108 GELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKI 167
            ++   GC+    TF   +     G      L+   ++   G +P+ +  NI+++ L K+
Sbjct: 345 NQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKV 404

Query: 168 GRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMF 223
           G   L +++ +E +     P+ +++N  + NLC L  +    D++  M   G   +   +
Sbjct: 405 GDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITY 464

Query: 224 EILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQ 283
             +++  CK  RI EA ++   M   G S +   +  LIDG  + +++D A  L  +M+ 
Sbjct: 465 NTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMIS 524

Query: 284 NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
            G  PN +TY S++  + +      A   L+ + + G   D+V +  LI+ L K G    
Sbjct: 525 EGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQV 584

Query: 344 ALDVYDGLL--ELKLVPDSYT--FCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALL 399
           AL V  G+    ++  P +Y     SL     +    SL  ++    E   D + Y  + 
Sbjct: 585 ALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGE-PPDALTYKIVF 643

Query: 400 SYFCKAGFP-NQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
              C+ G P  +A      M+DKGF P+  SF  L  GL
Sbjct: 644 RGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGL 682



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 82/398 (20%), Positives = 151/398 (37%), Gaps = 40/398 (10%)

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           + R  F P   ++E ++     +G +     L+  M   G  + +      +D +   + 
Sbjct: 65  LARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQL 124

Query: 271 LDMAGYLWEKMVQN--GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH 328
            D A  L    +Q   G   + V Y  L+   +E     +  S    + + G  PD+V  
Sbjct: 125 FDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTF 184

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCG 385
           N L+  L +      A+ + + +    + PD  TF +L+      G      ++   +  
Sbjct: 185 NTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLE 244

Query: 386 LEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
           +   A  V  N L++ +CK G    A+      +  GF PD  ++   + GLC    +  
Sbjct: 245 MGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGH 304

Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
           A+ V   +V      +   +  +V+ L + G+  +A  +  + +      D+ ++   I 
Sbjct: 305 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIA 364

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
            L  G R EEA  L  Q+    V P+ YT+ +++ + CK                     
Sbjct: 365 ALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVG------------------- 405

Query: 566 DYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           D H ++RL +                EM N G  PDE+
Sbjct: 406 DPHLALRLFE----------------EMKNSGCTPDEV 427


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 132/558 (23%), Positives = 265/558 (47%), Gaps = 16/558 (2%)

Query: 55  STLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVG 114
           + L   P    AL        + D+    + ++ +I  +  + G  + ++ +V E+ R G
Sbjct: 46  TALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAV-GALDLMKVLVAEMRREG 104

Query: 115 CVIKAQTFLLFLRIYWRGEMYG----MVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV 170
             +K      FL  Y   +++     ++L     +  FG   +T   N +++VL +  ++
Sbjct: 105 HQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPL--FGIQADTVVYNHLLNVLVEGSKM 162

Query: 171 DLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEIL 226
            L   V  E       P+ ++FN  +  LC+ + V     ++  M  +G  P+   F  L
Sbjct: 163 KLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTL 222

Query: 227 LNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL-DMAGYLWEKMVQNG 285
           +  F + G I  A ++   M+ +G S +     VLI+G+ +L R+ D  GY+ ++ + +G
Sbjct: 223 MQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQE-IADG 281

Query: 286 CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL 345
             P+ +TY + + G  +      A   +D++  EGH PD+  +N++++CL K G  ++A 
Sbjct: 282 FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAK 341

Query: 346 DVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL---LPKLVCGLEVEADLVVYNALLSYF 402
            + + +++   +PD  TF +L++ +C   R      L + V    V  D+  +N L++  
Sbjct: 342 GILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINAL 401

Query: 403 CKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNA 462
           CK G P+ A++L+  M + G TPD  ++  L+  LC   K+ +A+++ + +       + 
Sbjct: 402 CKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRST 461

Query: 463 HVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQ 522
             +  I+D L +  R  +A ++F +  ++    + +++   I GL +  + ++A+ L +Q
Sbjct: 462 ITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQ 521

Query: 523 MKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHS 582
           M    + PN  TY  +L  +CK+ +IK    +L+ +     E+D  T   L   + K   
Sbjct: 522 MISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGR 581

Query: 583 SSSAVNQLVEMCNLGLIP 600
           +  A+  L  M   G+ P
Sbjct: 582 TQVALKVLRGMRIKGMRP 599



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/532 (20%), Positives = 227/532 (42%), Gaps = 17/532 (3%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D   ++H+++V+     + + +  +  E+   G      TF   ++   R       +  
Sbjct: 145 DTVVYNHLLNVLVE-GSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLM 203

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCK 197
            +EM   G  P+      +M    + G ++  ++V    L+       ++ N+ +   CK
Sbjct: 204 LEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCK 263

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
           L  V +    I   +  GF P+   +   +N  C+   +  A +++ +M+  G    V  
Sbjct: 264 LGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFT 323

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           + ++++   +  +L+ A  +  +MV  GC P++ T+ +LI           A      + 
Sbjct: 324 YNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVT 383

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
            +G +PD+   N+LI+ L K+G    AL +++ +      PD  T+ +L+  +C  G+  
Sbjct: 384 VKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLG 443

Query: 378 LLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
               L+  +E        + YN ++   CK     +A ++++ M  +G + +  +F  L+
Sbjct: 444 KALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLI 503

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            GLC  +KID+A  +   ++      N   + +I+    + G   KA  +        + 
Sbjct: 504 DGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFE 563

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
           +DVV+Y   I GL + GRT+ A  +   M+   + P    Y  +L S  +  NI+    L
Sbjct: 564 VDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSL 623

Query: 555 LQDVIDARIELDYHTSIRLTKFIFK-----FHSSSSAVNQLVEMCNLGLIPD 601
            +++ +     D  T     K +F+           A + ++EM + G IP+
Sbjct: 624 FREMAEVGEPPDALTY----KIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPE 671



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 97/399 (24%), Positives = 182/399 (45%), Gaps = 14/399 (3%)

Query: 51  HIVHSTLLN--CPSDLIALSFFIW-CAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIV 107
            I ++T +N  C +D +  +  +     Q  +  DV +++ +++ + +  G+ E  +GI+
Sbjct: 286 QITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCK-NGQLEEAKGIL 344

Query: 108 GELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKI 167
            ++   GC+    TF   +     G      L+   ++   G +P+ +  NI+++ L K+
Sbjct: 345 NQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKV 404

Query: 168 GRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMF 223
           G   L +++ +E +     P+ +++N  + NLC L  +    D++  M   G   +   +
Sbjct: 405 GDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITY 464

Query: 224 EILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQ 283
             +++  CK  RI EA ++   M   G S +   +  LIDG  + +++D A  L  +M+ 
Sbjct: 465 NTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMIS 524

Query: 284 NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
            G  PN +TY S++  + +      A   L+ + + G   D+V +  LI+ L K G    
Sbjct: 525 EGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQV 584

Query: 344 ALDVYDGLL--ELKLVPDSYT--FCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALL 399
           AL V  G+    ++  P +Y     SL     +    SL  ++    E   D + Y  + 
Sbjct: 585 ALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGE-PPDALTYKIVF 643

Query: 400 SYFCKAGFP-NQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
              C+ G P  +A      M+DKGF P+  SF  L  GL
Sbjct: 644 RGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGL 682



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 82/398 (20%), Positives = 151/398 (37%), Gaps = 40/398 (10%)

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           + R  F P   ++E ++     +G +     L+  M   G  + +      +D +   + 
Sbjct: 65  LARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQL 124

Query: 271 LDMAGYLWEKMVQN--GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH 328
            D A  L    +Q   G   + V Y  L+   +E     +  S    + + G  PD+V  
Sbjct: 125 FDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTF 184

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCG 385
           N L+  L +      A+ + + +    + PD  TF +L+      G      ++   +  
Sbjct: 185 NTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLE 244

Query: 386 LEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
           +   A  V  N L++ +CK G    A+      +  GF PD  ++   + GLC    +  
Sbjct: 245 MGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGH 304

Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
           A+ V   +V      +   +  +V+ L + G+  +A  +  + +      D+ ++   I 
Sbjct: 305 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIA 364

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
            L  G R EEA  L  Q+    V P+ YT+ +++ + CK                     
Sbjct: 365 ALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVG------------------- 405

Query: 566 DYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           D H ++RL +                EM N G  PDE+
Sbjct: 406 DPHLALRLFE----------------EMKNSGCTPDEV 427


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 214/426 (50%), Gaps = 10/426 (2%)

Query: 141 AFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLC 196
           A D +   G  PN      ++    +  +++  +K+L+E +     PN +++N+ +  LC
Sbjct: 44  AMDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALC 103

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
           KL+ V   +DV+  M+  GF PNV  F  L++ FCK G + +A +LLG+M+  G   +V 
Sbjct: 104 KLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVV 163

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
            ++ LIDG  + ++   A  + E+M  +G +P+  TY++LI G  +A     A   L  +
Sbjct: 164 TYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRM 223

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
              G  PD+V ++ +I    K G   +A      + + +  PD  T+ +++  +C  G+ 
Sbjct: 224 AGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKI 283

Query: 377 S----LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
           +    +L ++    +V  D+V Y+ +++  CK+    +A KL + M   G  PD  ++  
Sbjct: 284 AEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTT 343

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           ++ GLC   +++EA  + QG+     A N   +T ++  L +A +  +A ++        
Sbjct: 344 IIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAG 403

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK--HIAVPPNAYTYRVMLLSFCKERNIKM 550
            P ++V+Y   + GL   GR +EA  L  +MK       P+A TYR ++ +      ++ 
Sbjct: 404 CPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQE 463

Query: 551 VKRLLQ 556
            ++LL+
Sbjct: 464 AEQLLE 469



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/430 (27%), Positives = 206/430 (47%), Gaps = 12/430 (2%)

Query: 105 GIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVL 164
           G +  L  +GC     T+   +  + R +     ++  +EM   G  PN    N+++D L
Sbjct: 43  GAMDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDAL 102

Query: 165 FKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV 220
            K+  V    D+  K+++    PN ++FN  +   CK  +V + + ++G+MV KG  PNV
Sbjct: 103 CKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNV 162

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
             +  L++  CK  +  EA ++L  M   G +     ++ LI G  +  +++ A  +  +
Sbjct: 163 VTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRR 222

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           M  +GC+P+VV Y+S+I  F ++     A   L  +  +  +PD+V +N +ID L K+G 
Sbjct: 223 MAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGK 282

Query: 341 YDDALDVYDGLLEL-KLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYN 396
             +A  + D + E   ++PD  T+ ++++ +C S       KL   +C      D+V Y 
Sbjct: 283 IAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYT 342

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            ++   CK G   +A  L   M   G  P+  ++  L+ GLC ARK+DEA  V + +   
Sbjct: 343 TIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNA 402

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR---AIVEKYPLDVVSYTVAIRGLLEGGRT 513
               N   +  +V+ L  +GR  +A QL +R      E  P D  +Y   +  L+     
Sbjct: 403 GCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSP-DAATYRTIVNALMSSDLV 461

Query: 514 EEAYILYSQM 523
           +EA  L  QM
Sbjct: 462 QEAEQLLEQM 471



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 109/429 (25%), Positives = 193/429 (44%), Gaps = 40/429 (9%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-PNFLSFNIALCNLC 196
            LE  +EM   GF P+ F    ++  +   G +D  +  L+     PN +++   +    
Sbjct: 9   ALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTYTALIAAFA 68

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
           +   +     ++  M  +G  PN+  + +L++  CK+  +  A  ++  MI  G + +V 
Sbjct: 69  RAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVM 128

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
            +  L+DGF +   +D A  L   MV  G  PNVVTY++LI G  +++ F  A   L+ +
Sbjct: 129 TFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEM 188

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
           ++ G  PD   ++ LI  L K    ++A  +   +      PD   + S++   C SG+ 
Sbjct: 189 KASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKL 248

Query: 377 SLLPKLVCGLEVE---ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG-FTPDNYSFVG 432
               K +  +  +    D+V YN ++   CK G   +A  + + M + G   PD  ++  
Sbjct: 249 LEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYST 308

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           ++ GLC +  + EA                     ++DR+ +AG C+             
Sbjct: 309 VINGLCKSDMLVEA-------------------QKLLDRMCKAG-CNP------------ 336

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVK 552
              DVV+YT  I GL + GR EEA  L   MK     PN  TY  ++   CK R +   +
Sbjct: 337 ---DVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAE 393

Query: 553 RLLQDVIDA 561
           R+++++ +A
Sbjct: 394 RVMEEMRNA 402



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/299 (23%), Positives = 132/299 (44%), Gaps = 11/299 (3%)

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A   L+ ++S G APD   H  +I  ++  G  D A+D    L  +   P+  T+ +L++
Sbjct: 9   ALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMD---HLRSMGCDPNVVTYTALIA 65

Query: 369 TVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
               + +     KL+  +       +LV YN L+   CK      A  +   M++ GF P
Sbjct: 66  AFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAP 125

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           +  +F  L+ G C    +D+A  +   +V      N   ++A++D L ++ +  +A ++ 
Sbjct: 126 NVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVL 185

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
                     D  +Y+  I GL +  + EEA  +  +M      P+   Y  ++ +FCK 
Sbjct: 186 EEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKS 245

Query: 546 RNIKMVKRLLQDVIDARIELD---YHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
             +   ++ LQ++   R   D   Y+T I     + K   +   ++Q+ E  +  ++PD
Sbjct: 246 GKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGD--VLPD 302


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 128/489 (26%), Positives = 240/489 (49%), Gaps = 33/489 (6%)

Query: 127 RIYWRGEMYGMVLEAFDEMGRFGFT------PNTFARNIVMDVLFKIGRVDLGIKVLKET 180
           R   R  ++ M L+  D +G FG        P+ F  N ++  + K+ + DL I + ++ 
Sbjct: 54  REILRNGLHSMKLD--DAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKM 111

Query: 181 QL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
           Q      N  ++NI +   C+ + +S    ++G M++ G+ P++     LLN +C   RI
Sbjct: 112 QRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171

Query: 237 AEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSL 296
           ++A  L+  M+ +G       +T LI G     +   A  L ++MVQ GC PN+VTY  +
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231

Query: 297 IKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
           + G  +     +AF+ L+ +E+     ++V ++ +ID L K    DDAL+++  +    +
Sbjct: 232 VNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV 291

Query: 357 VPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVK 413
            P+  T+ SL+S +C   R+S   +L+  +   ++  ++V +NAL+  F K G   +A K
Sbjct: 292 RPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEK 351

Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
           LY+ M+ +   PD +++  L+ G C   ++DEA ++++ ++  +   N   +  +++   
Sbjct: 352 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFC 411

Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
           +A R  + ++LFR         + V+YT  I G  +    + A +++ QM    V PN  
Sbjct: 412 KAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIM 471

Query: 534 TYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVE- 592
           TY  +L   CK  N K+ K        A +  +Y    ++   I+ +       N ++E 
Sbjct: 472 TYNTLLDGLCK--NGKLEK--------AMVVFEYLQRSKMEPTIYTY-------NIMIEG 514

Query: 593 MCNLGLIPD 601
           MC  G + D
Sbjct: 515 MCKAGKVED 523



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 117/485 (24%), Positives = 232/485 (47%), Gaps = 14/485 (2%)

Query: 85  SFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDE 144
            F+ ++S + ++  +F+ V  +  ++ R+G      T+ + +  + R     + L    +
Sbjct: 87  EFNKLLSAIAKMK-KFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGK 145

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET----QLPNFLSFNIALCNLCKLND 200
           M + G+ P+    + +++      R+   + ++ +       P+ ++F   +  L   N 
Sbjct: 146 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
            S    ++  MV++G  PN+  + +++N  CK G I  A+ LL  M       +V  ++ 
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYST 265

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL-DMLESE 319
           +ID   + R  D A  L+ +M   G  PNV+TY+SLI      + +S A   L DM+E +
Sbjct: 266 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERK 325

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
            + P++V  N LID   K G   +A  +YD +++  + PD +T+ SL++  C+  R    
Sbjct: 326 IN-PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 384

Query: 380 P---KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
               +L+   +   ++V YN L++ FCKA   ++ V+L+  M  +G   +  ++  L+ G
Sbjct: 385 KHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHG 444

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
              AR  D A  V++ +V +    N   +  ++D L + G+  KA+ +F      K    
Sbjct: 445 FFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 504

Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC----KERNIKMVK 552
           + +Y + I G+ + G+ E+ + L+  +    V P+   Y  M+  FC    KE    + +
Sbjct: 505 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFR 564

Query: 553 RLLQD 557
           ++ +D
Sbjct: 565 KMRED 569



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/428 (24%), Positives = 192/428 (44%), Gaps = 32/428 (7%)

Query: 176 VLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGR 235
           ++K   LP+   FN  L  + K+     V  +   M R G   N+  + IL+NCFC+  +
Sbjct: 76  MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 135

Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
           I+ A  LLG M+ LG   S+   + L++G+   +R+  A  L ++MV+ G  P+ +T+T+
Sbjct: 136 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 195

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           LI G       S A + +D +   G  P+LV + V+++ L K G  D A           
Sbjct: 196 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA----------- 244

Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLY 415
                               F+LL K+    ++EA++V+Y+ ++   CK    + A+ L+
Sbjct: 245 --------------------FNLLNKMEAA-KIEANVVIYSTVIDSLCKYRHEDDALNLF 283

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
             M +KG  P+  ++  L+  LC   +  +A  +   ++      N     A++D  ++ 
Sbjct: 284 TEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKE 343

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
           G+  +A +L+   I      D+ +Y+  I G     R +EA  ++  M      PN  TY
Sbjct: 344 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 403

Query: 536 RVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCN 595
             ++  FCK + I     L +++    +  +  T   L    F+     +A     +M +
Sbjct: 404 NTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 463

Query: 596 LGLIPDEM 603
            G+ P+ M
Sbjct: 464 DGVHPNIM 471



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/297 (28%), Positives = 148/297 (49%), Gaps = 7/297 (2%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK---ETQL-PNFLSFNIALC 193
            L  F EM   G  PN    + ++  L    R     ++L    E ++ PN ++FN  + 
Sbjct: 279 ALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALID 338

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
              K   +   + +   M+++   P++  +  L+N FC   R+ EA  +  LMI+     
Sbjct: 339 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 398

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
           +V  +  LI+GF + +R+D    L+ +M Q G   N VTYT+LI GF +A+    A    
Sbjct: 399 NVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 458

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
             + S+G  P+++ +N L+D L K G  + A+ V++ L   K+ P  YT+  ++  +C +
Sbjct: 459 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 518

Query: 374 GRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           G+      L C L    V+ D+++YN ++S FC+ G   +A  L+  M + G  PD+
Sbjct: 519 GKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDS 575



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 111/251 (44%), Gaps = 39/251 (15%)

Query: 151 TPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKD 206
            PN    N ++D   K G++     L  +++K +  P+  +++  +   C  + +   K 
Sbjct: 327 NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 386

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
           +  +M+ K  +PNV  +  L+N FCK  RI E  +L   M   G   +   +T LI GF 
Sbjct: 387 MFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFF 446

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF----------------MEAKMFSIAF 310
           + R  D A  ++++MV +G  PN++TY +L+ G                   +KM    +
Sbjct: 447 QARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 506

Query: 311 SFLDMLES-------------------EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGL 351
           ++  M+E                    +G  PD++ +N +I    + G  ++A  ++  +
Sbjct: 507 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKM 566

Query: 352 LELKLVPDSYT 362
            E   +PDS T
Sbjct: 567 REDGPLPDSGT 577


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 113/435 (25%), Positives = 219/435 (50%), Gaps = 7/435 (1%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           F EM +    P+    N ++  + K+ + DL I + +  Q      +  S+NI +   C+
Sbjct: 68  FGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCR 127

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            + +     V+G M++ G+ P++     LLN +C   RI++A  L+  M+ +G       
Sbjct: 128 RSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVT 187

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  LI G     +   A  L ++MVQ GC P++VTY +++ G  +     +A S L  +E
Sbjct: 188 FNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKME 247

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
                 D+V +N +ID L K    DDA  +++ +    + PD +T+ SL+S +C  GR+S
Sbjct: 248 KGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWS 307

Query: 378 LLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
              +L+  +   ++  ++V ++AL+  F K G   +A KLY+ M+ +   PD +++  L+
Sbjct: 308 DASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 367

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            G C   ++DEA ++++ ++  +   N   +  ++    +A R  + ++LFR        
Sbjct: 368 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV 427

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
            + V+Y   I+GL + G  + A  ++ +M    VPP+  TY ++L   CK   ++    +
Sbjct: 428 GNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVV 487

Query: 555 LQDVIDARIELDYHT 569
            + +  +++E D +T
Sbjct: 488 FEYLQKSKMEPDIYT 502



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 106/470 (22%), Positives = 216/470 (45%), Gaps = 8/470 (1%)

Query: 83  VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF 142
           +  F+ ++S + ++  +F+ V  +   +  +       ++ + +  + R     + L   
Sbjct: 80  IVEFNKLLSAIAKMK-KFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVL 138

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET----QLPNFLSFNIALCNLCKL 198
            +M + G+ P+    + +++      R+   + ++ +       P+ ++FN  +  L   
Sbjct: 139 GKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLH 198

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
           N  S    ++  MV++G  P++  +  ++N  CK G I  A  LL  M        V  +
Sbjct: 199 NKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 258

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
             +IDG  + + +D A  L+ KM   G  P+V TY SLI        +S A   L  +  
Sbjct: 259 NTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIE 318

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL 378
               P++V  + LID   K G   +A  +YD +++  + PD +T+ SL++  C+  R   
Sbjct: 319 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 378

Query: 379 LP---KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
                +L+   +   ++V YN L+  FCKA    + ++L+  M  +G   +  ++  L++
Sbjct: 379 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 438

Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
           GL  A   D A  +++ +V +    +   ++ ++D L + G+  KA+ +F      K   
Sbjct: 439 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 498

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
           D+ +Y + I G+ + G+ E+ + L+  +    V PN   Y  M+  FC++
Sbjct: 499 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 548



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 110/415 (26%), Positives = 198/415 (47%), Gaps = 9/415 (2%)

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
           AL NL KL+D   +    G MV+    P++  F  LL+   KM +      L   M  L 
Sbjct: 55  ALLNL-KLDDAIGL---FGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLR 110

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
            S  + ++ +LI+ F R  +L +A  +  KM++ G  P++VT +SL+ G+  +K  S A 
Sbjct: 111 ISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 170

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
           + +D +   G+ PD V  N LI  L       +A+ + D +++    PD  T+ ++++ +
Sbjct: 171 ALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGL 230

Query: 371 CLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
           C  G      SLL K+  G ++EAD+V+YN ++   CK    + A  L+N M  KG  PD
Sbjct: 231 CKRGDIDLALSLLKKMEKG-KIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPD 289

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
            +++  L+  LC   +  +A  +   ++      N    +A++D  ++ G+  +A +L+ 
Sbjct: 290 VFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
             I      D+ +Y+  I G     R +EA  ++  M      PN  TY  ++  FCK +
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 409

Query: 547 NIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            ++    L +++    +  +  T   L + +F+      A     +M + G+ PD
Sbjct: 410 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD 464



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 103/432 (23%), Positives = 199/432 (46%), Gaps = 23/432 (5%)

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKL 198
           D+M + G  P+      V++ L K G +DL + +LK+ +      + + +N  +  LCK 
Sbjct: 209 DQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKY 268

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
             + +   +   M  KG  P+V  +  L++C C  GR ++A +LL  MI    + +V  +
Sbjct: 269 KHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTF 328

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
           + LID F +  +L  A  L+++M++    P++ TY+SLI GF        A    +++ S
Sbjct: 329 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 388

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL 378
           +   P++V +N LI    K    ++ ++++  + +  LV ++ T+ +L+  +  +G   +
Sbjct: 389 KDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDM 448

Query: 379 LPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
             K+   +    V  D++ Y+ LL   CK G   +A+ ++  +      PD Y++  ++ 
Sbjct: 449 AQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIE 508

Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
           G+C A K+++  +++  + +     N  ++T ++      G   +A  LFR    +    
Sbjct: 509 GMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLP 568

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
           D   Y   IR  L  G    +  L  +M+      +A T             I MV  +L
Sbjct: 569 DSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDAST-------------ISMVINML 615

Query: 556 QDVIDARIELDY 567
               D R+E  Y
Sbjct: 616 H---DGRLEKSY 624



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 154/302 (50%), Gaps = 7/302 (2%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK---ETQL-PNFLSFNIALCNLCK 197
           F++M   G  P+ F  N ++  L   GR     ++L    E ++ PN ++F+  +    K
Sbjct: 278 FNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVK 337

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              +   + +   M+++   P++  +  L+N FC   R+ EA  +  LMI+     +V  
Sbjct: 338 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 397

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  LI GF + +R++    L+ +M Q G   N VTY +LI+G  +A    +A      + 
Sbjct: 398 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 457

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
           S+G  PD++ +++L+D L K G  + AL V++ L + K+ PD YT+  ++  +C +G+  
Sbjct: 458 SDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVE 517

Query: 378 LLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
               L C L    V+ ++++Y  ++S FC+ G   +A  L+  M + G  PD+  +  L+
Sbjct: 518 DGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLI 577

Query: 435 RG 436
           R 
Sbjct: 578 RA 579



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 87/189 (46%), Gaps = 4/189 (2%)

Query: 115 CVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI 174
           C     T+   ++ + + +     +E F EM + G   NT   N ++  LF+ G  D+  
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450

Query: 175 KVLK----ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCF 230
           K+ K    +   P+ ++++I L  LCK   +     V   + +    P++  + I++   
Sbjct: 451 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 510

Query: 231 CKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNV 290
           CK G++ + + L   +   G   +V  +T +I GF R    + A  L+ +M ++G  P+ 
Sbjct: 511 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDS 570

Query: 291 VTYTSLIKG 299
             Y +LI+ 
Sbjct: 571 GCYNTLIRA 579


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/432 (26%), Positives = 206/432 (47%), Gaps = 36/432 (8%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           FDEM + G  P+    + +++ L K+G   + +++LK+ +     PN +++N  + +LCK
Sbjct: 33  FDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCK 92

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              V+   D    MV++G  P+V  +  +L+ FC +GR+ EA  L   M+      +   
Sbjct: 93  DRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVT 152

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T+LIDG  + R +  A  ++E M + G  P+V TY +L+ G+        A    ++++
Sbjct: 153 FTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMD 212

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
            +G AP++  +N+LI+   K G  D+A  +   +    L PD +T               
Sbjct: 213 RKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFT--------------- 257

Query: 378 LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
                            Y+ L+  FC+ G P +A +L   M   G  P+  ++  +L GL
Sbjct: 258 -----------------YSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGL 300

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
           C    +DEA  + + +  +    N  ++T +++ +   G+   A +LF    V+     V
Sbjct: 301 CKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTV 360

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
           V+YTV I GLL+GG + EA  L+ +M      PN+ TY V++  F +  +     RL+++
Sbjct: 361 VTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEE 420

Query: 558 VIDARIELDYHT 569
           ++      D  T
Sbjct: 421 MVGKGFSADSST 432



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/394 (23%), Positives = 187/394 (47%), Gaps = 3/394 (0%)

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M + G  P +  F  LL+  C   +I +A +L   M+ +G    V  ++ +I+G  ++  
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
             MA  L +KM + GC PNVV Y ++I    + ++ + A  F   +  EG  PD+  ++ 
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLE 387
           ++     +G  ++A  ++  ++E  ++P+  TF  L+  +C     S   L+ + +    
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
           +E D+  YNAL+  +C     ++A KL+N M  KG  P+  S+  L+ G C + +IDEA 
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            +   +   +   +   ++ ++    + GR  +A +L +         ++++Y++ + GL
Sbjct: 241 GLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGL 300

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
            + G  +EA+ L   M+   + PN + Y +++   C    ++  + L  ++    I+   
Sbjct: 301 CKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTV 360

Query: 568 HTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            T   +   + K   S+ A     EM   G +P+
Sbjct: 361 VTYTVMISGLLKGGLSNEACELFREMAVNGCLPN 394


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/439 (25%), Positives = 222/439 (50%), Gaps = 7/439 (1%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALC 193
            ++ F +M +    P+    N ++  + K+ + +L I + ++ Q      +  +++I + 
Sbjct: 67  AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
             C+ + +S    V+  M++ G+ P++     LLN +C   RI++A  L+  M+ +G   
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
               +T LI G     +   A  L ++MVQ GC P++VTY +++ G  +     +A S L
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLL 246

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
             +E      D+V +N +ID L K    DDAL+++  +    + PD +T+ SL+S +C  
Sbjct: 247 KKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 306

Query: 374 GRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           GR+S   +L+  +   ++  ++V ++AL+  F K G   +A KLY+ M+ +   PD +++
Sbjct: 307 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 366

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             L+ G C   ++DEA ++++ ++  +   N   ++ ++    +A R  + ++LFR    
Sbjct: 367 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQ 426

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
                + V+YT  I G  +    + A +++ QM  + V PN  TY ++L   CK   +  
Sbjct: 427 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAK 486

Query: 551 VKRLLQDVIDARIELDYHT 569
              + + +  + +E D +T
Sbjct: 487 AMVVFEYLQRSTMEPDIYT 505



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 104/412 (25%), Positives = 198/412 (48%), Gaps = 8/412 (1%)

Query: 197 KLNDVSNVKDVI---GMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
           +L+D+  V D +   G MV+   +P++  F  LL+   KM +      L   M TLG S 
Sbjct: 57  RLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISH 116

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
            +  +++ I+ F R  +L +A  +  KM++ G  P++VT +SL+ G+  +K  S A + +
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           D +   G+ PD      LI  L       +A+ + D +++    PD  T+ ++++ +C  
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236

Query: 374 GR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
           G      SLL K+  G ++EAD+V+YN ++   CK    + A+ L+  M +KG  PD ++
Sbjct: 237 GDIDLALSLLKKMEKG-KIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFT 295

Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
           +  L+  LC   +  +A  +   ++      N    +A++D  ++ G+  +A +L+   I
Sbjct: 296 YSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 355

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
                 D+ +Y+  I G     R +EA  ++  M      PN  TY  ++  FCK + ++
Sbjct: 356 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVE 415

Query: 550 MVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
               L +++    +  +  T   L    F+     +A     +M ++G+ P+
Sbjct: 416 EGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 467



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 122/549 (22%), Positives = 242/549 (44%), Gaps = 50/549 (9%)

Query: 57  LLNCPSDLI----ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELAR 112
           L N  SD+I    A+  F    K R  F  +  F+ ++S V ++  +FE V  +  ++  
Sbjct: 54  LRNRLSDIIKVDDAVDLFGDMVKSRP-FPSIVEFNKLLSAVAKMN-KFELVISLGEQMQT 111

Query: 113 VGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDL 172
           +G      T+ +F+  + R     + L    +M + G+ P+    + +++      R+  
Sbjct: 112 LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171

Query: 173 GIKVLKET----QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLN 228
            + ++ +       P+  +F   +  L   N  S    ++  MV++G  P++  +  ++N
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231

Query: 229 CFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSP 288
             CK G I  A  LL  M        V  +  +IDG  + + +D A  L+ +M   G  P
Sbjct: 232 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRP 291

Query: 289 NVVTYTSLIKGFMEAKMFSIAFSFL-DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
           +V TY+SLI        +S A   L DM+E + + P++V  + LID   K G   +A  +
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIERKIN-PNVVTFSALIDAFVKEGKLVEAEKL 350

Query: 348 YDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP---KLVCGLEVEADLVVYNALLSYFCK 404
           YD +++  + PD +T+ SL++  C+  R        +L+   +   ++V Y+ L+  FCK
Sbjct: 351 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK 410

Query: 405 AGFPNQAVKLYNTMLDKGFT-----------------------------------PDNYS 429
           A    + ++L+  M  +G                                     P+  +
Sbjct: 411 AKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 470

Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
           +  LL GLC   K+ +A+ V++ +  +    + + +  +++ + +AG+     +LF    
Sbjct: 471 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS 530

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
           ++    +V++Y   I G    G  EEA  L  +MK     PN+ TY  ++ +  ++ + +
Sbjct: 531 LKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDRE 590

Query: 550 MVKRLLQDV 558
               L++++
Sbjct: 591 ASAELIKEM 599



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 119/278 (42%), Gaps = 38/278 (13%)

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---V 383
           +  +L + LS +   DDA+D++  +++ +  P    F  LLS V    +F L+  L   +
Sbjct: 50  YREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM 109

Query: 384 CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
             L +  DL  Y+  ++ FC+    + A+ +   M+  G+ PD  +   LL G C +++I
Sbjct: 110 QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRI 169

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
            +A+                   A+VD+++E G                Y  D  ++T  
Sbjct: 170 SDAV-------------------ALVDQMVEMG----------------YKPDTFTFTTL 194

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           I GL    +  EA  L  QM      P+  TY  ++   CK  +I +   LL+ +   +I
Sbjct: 195 IHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKI 254

Query: 564 ELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           E D      +   + K+     A+N   EM N G+ PD
Sbjct: 255 EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 292



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 4/214 (1%)

Query: 115 CVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI 174
           C     T+   ++ + + +     +E F EM + G   NT     ++   F+    D   
Sbjct: 394 CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 453

Query: 175 KVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCF 230
            V K+       PN L++NI L  LCK   ++    V   + R    P++  + I++   
Sbjct: 454 MVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 513

Query: 231 CKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNV 290
           CK G++ + ++L   +   G S +V A+  +I GF R    + A  L +KM ++G  PN 
Sbjct: 514 CKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNS 573

Query: 291 VTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
            TY +LI+  +       +   +  + S G A D
Sbjct: 574 GTYNTLIRARLRDGDREASAELIKEMRSCGFAGD 607



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 50/229 (21%), Positives = 103/229 (44%), Gaps = 5/229 (2%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDV 207
           PN    + ++    K  RV+ G+++ +E      + N +++   +    +  D  N + V
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 455

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
              MV  G +PN+  + ILL+  CK G++A+A  +   +        +  + ++I+G  +
Sbjct: 456 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 515

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
             +++    L+  +   G SPNV+ Y ++I GF        A S L  ++ +G  P+   
Sbjct: 516 AGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGT 575

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
           +N LI    + G  + + ++   +       D+ T   L++ +   GR 
Sbjct: 576 YNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNMLHDGRL 623


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 120/455 (26%), Positives = 223/455 (49%), Gaps = 15/455 (3%)

Query: 127 RIYWRGEMYGMVLEAFDEMGRFGFT------PNTFARNIVMDVLFKIGRVD----LGIKV 176
           R   R  ++ M L+  D +G FG        P+    N ++  + K+ + D    LG K+
Sbjct: 54  REILRNGLHDMKLD--DAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKM 111

Query: 177 LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
            +   +    ++NI +   C+ + +S    ++G M++ G+ P++     LLN +C   RI
Sbjct: 112 QRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171

Query: 237 AEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSL 296
           ++A  L+  M+ +G       +T LI G     +   A  L ++MVQ GC PN+VTY  +
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231

Query: 297 IKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
           + G  +     +A + L+ +E+     D+V  N +ID L K    DDAL+++  +    +
Sbjct: 232 VNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 291

Query: 357 VPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVK 413
            P+  T+ SL+S +C  GR+S   +L+  +   ++  +LV +NAL+  F K G   +A K
Sbjct: 292 RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK 351

Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
           LY+ M+ +   PD +++  L+ G C   ++D+A  +++ +V  +   +   +  ++    
Sbjct: 352 LYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFC 411

Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
           ++ R     +LFR         D V+YT  I+GL   G  + A  ++ QM    VPP+  
Sbjct: 412 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 471

Query: 534 TYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
           TY ++L   C    ++    +   +  + I+LD +
Sbjct: 472 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 506



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 121/499 (24%), Positives = 233/499 (46%), Gaps = 11/499 (2%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
           A+  F    K R     +  F+ ++S + ++  +F+ V  +  ++ R+  V    T+ + 
Sbjct: 69  AIGLFGGMVKSRP-LPSIVEFNKLLSAIAKMK-KFDVVISLGEKMQRLEIVHGLYTYNIL 126

Query: 126 LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET----Q 181
           +  + R     + L    +M + G+ P+    + +++      R+   + ++ +      
Sbjct: 127 INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 186

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
            P+ ++F   +  L   N  S    ++  MV++G  PN+  + +++N  CK G    A  
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALN 246

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           LL  M        V  +  +ID   + R +D A  L+++M   G  PNVVTY+SLI    
Sbjct: 247 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 306

Query: 302 EAKMFSIAFSFL-DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
               +S A   L DM+E + + P+LV  N LID   K G + +A  +YD +++  + PD 
Sbjct: 307 SYGRWSDASQLLSDMIEKKIN-PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365

Query: 361 YTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
           +T+ SL++  C+  R     ++   +   +   D+V YN L+  FCK+       +L+  
Sbjct: 366 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE 425

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           M  +G   D  ++  L++GL      D A  V++ +V +    +   ++ ++D L   G+
Sbjct: 426 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 485

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
             KA+++F      +  LD+  YT  I G+ + G+ ++ + L+  +    V PN  TY  
Sbjct: 486 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 545

Query: 538 MLLSFCKERNIKMVKRLLQ 556
           M+   C +R ++    LL+
Sbjct: 546 MISGLCSKRLLQEAYALLK 564



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 101/428 (23%), Positives = 190/428 (44%), Gaps = 32/428 (7%)

Query: 176 VLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGR 235
           ++K   LP+ + FN  L  + K+     V  +   M R      +  + IL+NCFC+  +
Sbjct: 76  MVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQ 135

Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
           I+ A  LLG M+ LG   S+   + L++G+   +R+  A  L ++MV+ G  P+ +T+T+
Sbjct: 136 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 195

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           LI G       S A + +D +   G  P+LV + V+++ L K G  D AL++ + +   K
Sbjct: 196 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAK 255

Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLY 415
                                           +EAD+V++N ++   CK    + A+ L+
Sbjct: 256 --------------------------------IEADVVIFNTIIDSLCKYRHVDDALNLF 283

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
             M  KG  P+  ++  L+  LC   +  +A  +   ++      N     A++D  ++ 
Sbjct: 284 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 343

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
           G+  +A +L+   I      D+ +Y   + G     R ++A  ++  M      P+  TY
Sbjct: 344 GKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTY 403

Query: 536 RVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCN 595
             ++  FCK + ++    L +++    +  D  T   L + +F      +A     +M +
Sbjct: 404 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 463

Query: 596 LGLIPDEM 603
            G+ PD M
Sbjct: 464 DGVPPDIM 471



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 144/306 (47%), Gaps = 7/306 (2%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK---ETQL-PNFLSFNIALC 193
            L  F EM   G  PN    + ++  L   GR     ++L    E ++ PN ++FN  + 
Sbjct: 279 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 338

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
              K       + +   M+++   P++  +  L+N FC   R+ +A Q+   M++     
Sbjct: 339 AFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFP 398

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
            V  +  LI GF + +R++    L+ +M   G   + VTYT+LI+G         A    
Sbjct: 399 DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 458

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
             + S+G  PD++ +++L+D L   G  + AL+V+D + + ++  D Y + +++  +C +
Sbjct: 459 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 518

Query: 374 GRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           G+      L C L    V+ ++V YN ++S  C      +A  L   M + G  P++ ++
Sbjct: 519 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTY 578

Query: 431 VGLLRG 436
             L+R 
Sbjct: 579 NTLIRA 584



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 92/381 (24%), Positives = 168/381 (44%), Gaps = 4/381 (1%)

Query: 224 EILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQ 283
           EIL N    M ++ +A  L G M+      S+  +  L+    ++++ D+   L EKM +
Sbjct: 55  EILRNGLHDM-KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQR 113

Query: 284 NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
                 + TY  LI  F      S+A + L  +   G+ P +V  + L++         D
Sbjct: 114 LEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISD 173

Query: 344 ALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLS 400
           A+ + D ++E+   PD+ TF +L+  + L  + S    LV  +     + +LV Y  +++
Sbjct: 174 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN 233

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
             CK G  + A+ L N M       D   F  ++  LC  R +D+A+N+++ +       
Sbjct: 234 GLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP 293

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
           N   +++++  L   GR   A QL    I +K   ++V++   I   ++ G+  EA  LY
Sbjct: 294 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLY 353

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKF 580
             M   ++ P+ +TY  ++  FC    +   K++ + ++      D  T   L K   K 
Sbjct: 354 DDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKS 413

Query: 581 HSSSSAVNQLVEMCNLGLIPD 601
                      EM + GL+ D
Sbjct: 414 KRVEDGTELFREMSHRGLVGD 434


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 120/455 (26%), Positives = 223/455 (49%), Gaps = 15/455 (3%)

Query: 127 RIYWRGEMYGMVLEAFDEMGRFGFT------PNTFARNIVMDVLFKIGRVD----LGIKV 176
           R   R  ++ M L+  D +G FG        P+    N ++  + K+ + D    LG K+
Sbjct: 16  REILRNGLHDMKLD--DAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKM 73

Query: 177 LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
            +   +    ++NI +   C+ + +S    ++G M++ G+ P++     LLN +C   RI
Sbjct: 74  QRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 133

Query: 237 AEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSL 296
           ++A  L+  M+ +G       +T LI G     +   A  L ++MVQ GC PN+VTY  +
Sbjct: 134 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 193

Query: 297 IKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
           + G  +     +A + L+ +E+     D+V  N +ID L K    DDAL+++  +    +
Sbjct: 194 VNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 253

Query: 357 VPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVK 413
            P+  T+ SL+S +C  GR+S   +L+  +   ++  +LV +NAL+  F K G   +A K
Sbjct: 254 RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK 313

Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
           LY+ M+ +   PD +++  L+ G C   ++D+A  +++ +V  +   +   +  ++    
Sbjct: 314 LYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFC 373

Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
           ++ R     +LFR         D V+YT  I+GL   G  + A  ++ QM    VPP+  
Sbjct: 374 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 433

Query: 534 TYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
           TY ++L   C    ++    +   +  + I+LD +
Sbjct: 434 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 468



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 121/499 (24%), Positives = 233/499 (46%), Gaps = 11/499 (2%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
           A+  F    K R     +  F+ ++S + ++  +F+ V  +  ++ R+  V    T+ + 
Sbjct: 31  AIGLFGGMVKSRP-LPSIVEFNKLLSAIAKMK-KFDVVISLGEKMQRLEIVHGLYTYNIL 88

Query: 126 LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET----Q 181
           +  + R     + L    +M + G+ P+    + +++      R+   + ++ +      
Sbjct: 89  INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 148

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
            P+ ++F   +  L   N  S    ++  MV++G  PN+  + +++N  CK G    A  
Sbjct: 149 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALN 208

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           LL  M        V  +  +ID   + R +D A  L+++M   G  PNVVTY+SLI    
Sbjct: 209 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 268

Query: 302 EAKMFSIAFSFL-DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
               +S A   L DM+E + + P+LV  N LID   K G + +A  +YD +++  + PD 
Sbjct: 269 SYGRWSDASQLLSDMIEKKIN-PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 327

Query: 361 YTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
           +T+ SL++  C+  R     ++   +   +   D+V YN L+  FCK+       +L+  
Sbjct: 328 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE 387

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           M  +G   D  ++  L++GL      D A  V++ +V +    +   ++ ++D L   G+
Sbjct: 388 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 447

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
             KA+++F      +  LD+  YT  I G+ + G+ ++ + L+  +    V PN  TY  
Sbjct: 448 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 507

Query: 538 MLLSFCKERNIKMVKRLLQ 556
           M+   C +R ++    LL+
Sbjct: 508 MISGLCSKRLLQEAYALLK 526



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 103/428 (24%), Positives = 191/428 (44%), Gaps = 32/428 (7%)

Query: 176 VLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGR 235
           ++K   LP+ + FN  L  + K+     V  +   M R      +  + IL+NCFC+  +
Sbjct: 38  MVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQ 97

Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
           I+ A  LLG M+ LG   S+   + L++G+   +R+  A  L ++MV+ G  P+ +T+T+
Sbjct: 98  ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 157

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           LI G       S A + +D +   G  P+LV + V+++ L K G  D AL+         
Sbjct: 158 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALN--------- 208

Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLY 415
                                 LL K+    ++EAD+V++N ++   CK    + A+ L+
Sbjct: 209 ----------------------LLNKMEAA-KIEADVVIFNTIIDSLCKYRHVDDALNLF 245

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
             M  KG  P+  ++  L+  LC   +  +A  +   ++      N     A++D  ++ 
Sbjct: 246 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 305

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
           G+  +A +L+   I      D+ +Y   + G     R ++A  ++  M      P+  TY
Sbjct: 306 GKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTY 365

Query: 536 RVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCN 595
             ++  FCK + ++    L +++    +  D  T   L + +F      +A     +M +
Sbjct: 366 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 425

Query: 596 LGLIPDEM 603
            G+ PD M
Sbjct: 426 DGVPPDIM 433



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 144/306 (47%), Gaps = 7/306 (2%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK---ETQL-PNFLSFNIALC 193
            L  F EM   G  PN    + ++  L   GR     ++L    E ++ PN ++FN  + 
Sbjct: 241 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 300

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
              K       + +   M+++   P++  +  L+N FC   R+ +A Q+   M++     
Sbjct: 301 AFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFP 360

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
            V  +  LI GF + +R++    L+ +M   G   + VTYT+LI+G         A    
Sbjct: 361 DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 420

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
             + S+G  PD++ +++L+D L   G  + AL+V+D + + ++  D Y + +++  +C +
Sbjct: 421 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 480

Query: 374 GRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           G+      L C L    V+ ++V YN ++S  C      +A  L   M + G  P++ ++
Sbjct: 481 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTY 540

Query: 431 VGLLRG 436
             L+R 
Sbjct: 541 NTLIRA 546



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 92/381 (24%), Positives = 168/381 (44%), Gaps = 4/381 (1%)

Query: 224 EILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQ 283
           EIL N    M ++ +A  L G M+      S+  +  L+    ++++ D+   L EKM +
Sbjct: 17  EILRNGLHDM-KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQR 75

Query: 284 NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
                 + TY  LI  F      S+A + L  +   G+ P +V  + L++         D
Sbjct: 76  LEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISD 135

Query: 344 ALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLS 400
           A+ + D ++E+   PD+ TF +L+  + L  + S    LV  +     + +LV Y  +++
Sbjct: 136 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN 195

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
             CK G  + A+ L N M       D   F  ++  LC  R +D+A+N+++ +       
Sbjct: 196 GLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP 255

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
           N   +++++  L   GR   A QL    I +K   ++V++   I   ++ G+  EA  LY
Sbjct: 256 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLY 315

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKF 580
             M   ++ P+ +TY  ++  FC    +   K++ + ++      D  T   L K   K 
Sbjct: 316 DDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKS 375

Query: 581 HSSSSAVNQLVEMCNLGLIPD 601
                      EM + GL+ D
Sbjct: 376 KRVEDGTELFREMSHRGLVGD 396


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 125/507 (24%), Positives = 246/507 (48%), Gaps = 15/507 (2%)

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYG----MVLEAFDEMGRFGFTPNTFARNIVM 161
           +V E+ R G  +K      FL  Y   +++     ++L     +  FG   +T   N ++
Sbjct: 4   LVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPL--FGIQADTVVYNHLL 61

Query: 162 DVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFY 217
           +VL +  ++ L   V  E       P+ ++FN  +  LC+ + V     ++  M  +G  
Sbjct: 62  NVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVA 121

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL-DMAGY 276
           P+   F  L+  F + G I  A ++   M+ +G S +     VLI+G+ +L R+ D  GY
Sbjct: 122 PDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGY 181

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           + ++ + +G  P+ +TY + + G  +      A   +D++  EGH PD+  +N++++CL 
Sbjct: 182 IQQE-IADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLC 240

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL---LPKLVCGLEVEADLV 393
           K G  ++A  + + +++   +PD  TF +L++ +C   R      L + V    V  D+ 
Sbjct: 241 KNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVY 300

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            +N L++  CK G P+ A++L+  M + G TPD  ++  L+  LC   K+ +A+++ + +
Sbjct: 301 TFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM 360

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
                  +   +  I+D L +  R  +A ++F +  ++    + +++   I GL +  + 
Sbjct: 361 ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKI 420

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
           ++A+ L +QM    + PN  TY  +L  +CK+ +IK    +L+ +     E+D  T   L
Sbjct: 421 DDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTL 480

Query: 574 TKFIFKFHSSSSAVNQLVEMCNLGLIP 600
              + K   +  A+  L  M   G+ P
Sbjct: 481 INGLCKAGRTQVALKVLRGMRIKGMRP 507



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 111/532 (20%), Positives = 227/532 (42%), Gaps = 17/532 (3%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D   ++H+++V+     + + +  +  E+   G      TF   ++   R       +  
Sbjct: 53  DTVVYNHLLNVLVE-GSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLM 111

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCK 197
            +EM   G  P+      +M    + G ++  ++V    L+       ++ N+ +   CK
Sbjct: 112 LEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCK 171

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
           L  V +    I   +  GF P+   +   +N  C+   +  A +++ +M+  G    V  
Sbjct: 172 LGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFT 231

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           + ++++   +  +L+ A  +  +MV  GC P++ T+ +LI           A      + 
Sbjct: 232 YNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVT 291

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
            +G +PD+   N+LI+ L K+G    AL +++ +      PD  T+ +L+  +C  G+  
Sbjct: 292 VKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLG 351

Query: 378 LLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
               L+  +E        + YN ++   CK     +A ++++ M  +G + +  +F  L+
Sbjct: 352 KALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLI 411

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            GLC  +KID+A  +   ++      N   + +I+    + G   KA  +        + 
Sbjct: 412 DGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFE 471

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
           +DVV+Y   I GL + GRT+ A  +   M+   + P    Y  +L S  +  NI+    L
Sbjct: 472 VDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSL 531

Query: 555 LQDVIDARIELDYHTSIRLTKFIFK-----FHSSSSAVNQLVEMCNLGLIPD 601
            +++ +     D  T     K +F+           A + ++EM + G IP+
Sbjct: 532 FREMAEVGEPPDALTY----KIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPE 579



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 97/399 (24%), Positives = 182/399 (45%), Gaps = 14/399 (3%)

Query: 51  HIVHSTLLN--CPSDLIALSFFIW-CAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIV 107
            I ++T +N  C +D +  +  +     Q  +  DV +++ +++ + +  G+ E  +GI+
Sbjct: 194 QITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCK-NGQLEEAKGIL 252

Query: 108 GELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKI 167
            ++   GC+    TF   +     G      L+   ++   G +P+ +  NI+++ L K+
Sbjct: 253 NQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKV 312

Query: 168 GRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMF 223
           G   L +++ +E +     P+ +++N  + NLC L  +    D++  M   G   +   +
Sbjct: 313 GDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITY 372

Query: 224 EILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQ 283
             +++  CK  RI EA ++   M   G S +   +  LIDG  + +++D A  L  +M+ 
Sbjct: 373 NTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMIS 432

Query: 284 NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
            G  PN +TY S++  + +      A   L+ + + G   D+V +  LI+ L K G    
Sbjct: 433 EGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQV 492

Query: 344 ALDVYDGLL--ELKLVPDSYT--FCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALL 399
           AL V  G+    ++  P +Y     SL     +    SL  ++    E   D + Y  + 
Sbjct: 493 ALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGE-PPDALTYKIVF 551

Query: 400 SYFCKAGFP-NQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
              C+ G P  +A      M+DKGF P+  SF  L  GL
Sbjct: 552 RGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGL 590



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 78/345 (22%), Positives = 132/345 (38%), Gaps = 71/345 (20%)

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
            VL++G     ++ +   ++ +M   G  P+VVT+ +L+K    A     A   L+ + S
Sbjct: 62  NVLVEG----SKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSS 117

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL 378
            G APD      L+    + GS + AL V   +LE+         CS             
Sbjct: 118 RGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMG--------CS------------- 156

Query: 379 LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
                      A  V  N L++ +CK G    A+      +  GF PD  ++   + GLC
Sbjct: 157 -----------ATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLC 205

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
               +  A+ V   +V      +   +  +V+ L + G+  +A  +  + +      D+ 
Sbjct: 206 QNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDIT 265

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           ++   I  L  G R EEA  L  Q+    V P+ YT+ +++ + CK              
Sbjct: 266 TFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVG------------ 313

Query: 559 IDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
                  D H ++RL +                EM N G  PDE+
Sbjct: 314 -------DPHLALRLFE----------------EMKNSGCTPDEV 335



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/214 (21%), Positives = 90/214 (42%)

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
           ++AD VVYN LL+   +         +Y+ M  +G  PD  +F  L++ LC A ++  A+
Sbjct: 50  IQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAV 109

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            + + +     A +    T ++   +E G    A+++  R +        V+  V I G 
Sbjct: 110 LMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGY 169

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
            + GR E+A     Q       P+  TY   +   C+  ++    +++  ++    + D 
Sbjct: 170 CKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDV 229

Query: 568 HTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            T   +   + K      A   L +M + G +PD
Sbjct: 230 FTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPD 263


>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
 gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
          Length = 556

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 125/497 (25%), Positives = 236/497 (47%), Gaps = 23/497 (4%)

Query: 65  IALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLL 124
           +A+ FF W  +Q  Y HDV S++H++ ++ +   +F T + +  +L   GC     TF +
Sbjct: 9   LAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGK-VYKDLLHSGCSPNLVTFKI 67

Query: 125 FLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-- 182
            +R   +       LE    +  F   P+ +  N ++  LFK G  D  +K+ +  +   
Sbjct: 68  LIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSR 127

Query: 183 --PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG--FYPNVRMFEILLNC-FCKMGRIA 237
             P+  ++N  +  LCK  ++   ++++  M+R+G    P++  +  L+N   CK G + 
Sbjct: 128 VNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVE 187

Query: 238 EAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLI 297
           EA ++L  M   G +  V  +  +I       R+  A  + + M    CSP++VT+ +L+
Sbjct: 188 EALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTFNTLL 244

Query: 298 KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
            GF +A M   A   L+ +  E   PD++ + +L++ L ++G    A  + + ++    +
Sbjct: 245 DGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYI 304

Query: 358 PDSYTFCSLLSTVCLSGRFSLLPKLV---CGLEVEADLV---------VYNALLSYFCKA 405
           PD   + SL+  +C SG      KLV      E+ A++V          YN +L    K 
Sbjct: 305 PDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKD 364

Query: 406 GFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVH 465
           G  ++AV L + ++ +G+ PD  ++  L+ GLC A ++ EA ++   +       N    
Sbjct: 365 GSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTL 424

Query: 466 TAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKH 525
            ++V  L   GR   A  L      +++  +VV YT  I GL +  R ++A ++   M+ 
Sbjct: 425 GSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRG 484

Query: 526 IAVPPNAYTYRVMLLSF 542
             V  + + YR +++S 
Sbjct: 485 QGVALDDFAYRKLIVSM 501



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 109/437 (24%), Positives = 198/437 (45%), Gaps = 36/437 (8%)

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           ++  G  PN+  F+IL+   CK G+   A + L  +     +  V  +  LI G  +   
Sbjct: 53  LLHSGCSPNLVTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGN 112

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG--HAPDLVFH 328
            D A  L+E M  +  +P++ TY ++I G  ++     A   L+ +   G   APD+V +
Sbjct: 113 PDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTY 172

Query: 329 NVLIDC-LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE 387
           N LI+  + K G  ++AL++ DG+      PD  T+ S++  +C++GR     +++  + 
Sbjct: 173 NTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMS 232

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
              DLV +N LL  FCKAG   +A+++   M  +   PD  ++  L+ GLC   ++  A 
Sbjct: 233 CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAF 292

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF-----RRAIVEKYPLDVV---- 498
            + + IV      +   +T++VD L ++G   +A +L      R  + E   +++V    
Sbjct: 293 YLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLF 352

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           +Y + + GL++ G   +A  L S +      P+  TY  ++   CK   +    R   D+
Sbjct: 353 TYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRV----REACDL 408

Query: 559 IDARIELD-YHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTP 617
            D    L  +   + L   +F              +C +G + D+ W  +  +S +   P
Sbjct: 409 ADEMASLGCFPNDVTLGSVVFG-------------LCRVGRV-DDAWSLVVEMSRKRHAP 454

Query: 618 -----VSLFDGFVPCER 629
                 SL DG    +R
Sbjct: 455 NVVVYTSLIDGLCKSDR 471



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/333 (23%), Positives = 141/333 (42%), Gaps = 45/333 (13%)

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
           L  + C     TF   L  + +  M    LE  +EM R    P+     I+++ L ++G+
Sbjct: 228 LKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQ 287

Query: 170 VDLGIKVLKET----QLPNFLSFNIALCNLCKLNDVS---------NVKDVIGMMVRKGF 216
           V +   +L+E      +P+ +++   +  LCK  ++          + ++++  MV    
Sbjct: 288 VQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINM 347

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
            P +  + I+L    K G I++A  L+  ++  G    V  +  LIDG  +  R+  A  
Sbjct: 348 VPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACD 407

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           L ++M   GC PN VT  S++ G         A+S +  +  + HAP++V +  LID L 
Sbjct: 408 LADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLC 467

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYN 396
           K    DDA  V D +    +  D + +  L+ ++   GR +                   
Sbjct: 468 KSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVA------------------- 508

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
                        +A+ +Y+ M+ +GF PD  +
Sbjct: 509 -------------EAMAMYDEMVARGFLPDGST 528



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/277 (22%), Positives = 119/277 (42%), Gaps = 17/277 (6%)

Query: 47  ILAPHIVHSTLLN--CPSDLIALSFFIWCAKQRD-YFHDVQSFDHMISVVTRLTGRFE-- 101
           IL   I ++ L+N  C    + ++F++     R  Y  DV ++  ++  + + +G  E  
Sbjct: 268 ILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCK-SGEIEEA 326

Query: 102 -------TVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNT 154
                  + R I+ E+  +  V    T+ + L    +       +    ++   G+ P+ 
Sbjct: 327 HKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDV 386

Query: 155 FARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGM 210
              N ++D L K  RV    DL  ++      PN ++    +  LC++  V +   ++  
Sbjct: 387 VTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVE 446

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M RK   PNV ++  L++  CK  R+ +A  +L  M   G +L   A+  LI       R
Sbjct: 447 MSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGR 506

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
           +  A  ++++MV  G  P+  T  +L +  M   +F 
Sbjct: 507 VAEAMAMYDEMVARGFLPDGSTSKTLEEAAMSNSVFE 543



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 79/169 (46%), Gaps = 3/169 (1%)

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           D+  YN LL    K+G   +  K+Y  +L  G +P+  +F  L+RG C A +   A+   
Sbjct: 26  DVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRALEFL 85

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
           + +   + A + ++   ++  L + G   +A++LF      +   D+ +Y   I GL + 
Sbjct: 86  RALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKS 145

Query: 511 GRTEEAYILYSQM--KHIAVPPNAYTYRVML-LSFCKERNIKMVKRLLQ 556
           G  E+A  L  +M  +     P+  TY  ++    CK+ +++    +L 
Sbjct: 146 GNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILD 194


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/447 (26%), Positives = 212/447 (47%), Gaps = 14/447 (3%)

Query: 164 LFKIGRVDLGIKVLKE----TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN 219
           L K  R+   ++VL+E      +P+  +  + + +LC  + V + ++++  M+ +G   N
Sbjct: 49  LSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAAN 108

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
              +  L++  CK  R+ EA  L+  M   G + +V  +  +I GF R RR+D A    E
Sbjct: 109 AITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFME 168

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
           +MV  GC P+++TYT+LI GF +++        L  +   G  PD+V ++ +ID L K G
Sbjct: 169 QMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAG 228

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLVCGLEVEADLVVY 395
              DA+D+++   E+   P + T+ SL+   C +G       LL K+V   +   D+V Y
Sbjct: 229 RLRDAVDIFE---EMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMV-DDKCAPDVVTY 284

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
             L+S FCK G  + A +L+  M+    +PD  +F  L+ GLCG  ++++A+ + + I  
Sbjct: 285 TTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITR 344

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
                  + +  +VD   +A +  KA +L        +  + V+Y + + G    GRT++
Sbjct: 345 RGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQ 404

Query: 516 AYILYSQMKHIA--VPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
           A     Q+       P +   Y ++L + C++       +  +++I         T   +
Sbjct: 405 ALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATV 464

Query: 574 TKFIFKFHSSSSAVNQLVEMCNLGLIP 600
              + K H    A   L EM   G  P
Sbjct: 465 VFALCKAHQPQQAHELLEEMIKYGHTP 491



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 99/398 (24%), Positives = 188/398 (47%), Gaps = 3/398 (0%)

Query: 150 FTPNTFARNIVMDVLFKIGRV--DLGI-KVLKETQLPNFLSFNIALCNLCKLNDVSNVKD 206
             P T   N+V+  L + GR+   LG+ + + +   P+FL++   +  L K   + +   
Sbjct: 1   MNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHPPDFLTYTKLVHGLSKARRLRDAVQ 60

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
           V+  MV     P+     +++   C   R+ +A +L+  M+  G + +   ++ L+DG  
Sbjct: 61  VLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLC 120

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
           +  RLD A  L E M + GC+P VVTY S+I GF  A+    A  F++ + +EG  PD++
Sbjct: 121 KCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDII 180

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL 386
            +  LI    K       L++   +      PD  T+ +++  +C +GR      +   +
Sbjct: 181 TYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM 240

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
                 + YN+L+  +C+AG  ++A++L   M+D    PD  ++  L+   C   ++D+A
Sbjct: 241 SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDA 300

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
             ++Q +V N  + +    T++VD L   GR   A++L         P  + +Y   + G
Sbjct: 301 YELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDG 360

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
             +  +  +A  L +  +     PN  TY +++   C+
Sbjct: 361 YCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCR 398



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/428 (24%), Positives = 190/428 (44%), Gaps = 12/428 (2%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNL 195
           E  +EM   G   N    + ++D L K  R+D  + +++        P  +++N  +   
Sbjct: 95  ELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGF 154

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
           C+   V      +  MV +G +P++  +  L+  FCK   +    +LLG +   G +  +
Sbjct: 155 CRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDI 214

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
             ++ +IDG  +  RL  A  ++E+M    C+P  +TY SLI G+  A     A   L  
Sbjct: 215 VTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGK 271

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
           +  +  APD+V +  L+    KMG  DDA +++  ++  KL PD  TF SL+  +C  GR
Sbjct: 272 MVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGR 331

Query: 376 FSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
                +L+  +        +  YN ++  +CKA    +A +L      +GF P+  ++  
Sbjct: 332 MEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNI 391

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHV--HTAIVDRLIEAGRCHKAIQLFRRAIV 490
           L+ G C A + D+A+     +          V  +  I+D L   GR   A+Q +   I 
Sbjct: 392 LVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQ 451

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
             Y     ++   +  L +  + ++A+ L  +M      P   T   ++ ++C+   I+ 
Sbjct: 452 RGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQK 511

Query: 551 VKRLLQDV 558
              L  ++
Sbjct: 512 ADELASEL 519



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 96/388 (24%), Positives = 166/388 (42%), Gaps = 33/388 (8%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           R +   G + ++   GC     T+   +  + +    G  LE   E+ R GFTP+    +
Sbjct: 159 RVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYS 218

Query: 159 IVMDVLFKIGRVDLGIKVLKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFY 217
            V+D L K GR+   + + +E    P  +++N  +   C+  D+     ++G MV     
Sbjct: 219 TVIDGLCKAGRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCA 278

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
           P+V  +  L++ FCKMGR+ +AY+L   M+    S  V  +T L+DG     R++ A  L
Sbjct: 279 PDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALEL 338

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
            E++ + GC P + TY  ++ G+ +A     A   +    S G  P+ V +N+L+    +
Sbjct: 339 LEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCR 398

Query: 338 MGSYDDALDVYDGL-LELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYN 396
            G  D AL   D L  E    P S                               + +Y 
Sbjct: 399 AGRTDQALQYLDQLNSEGGPCPTS-------------------------------VAMYA 427

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            +L   C+ G  + AV+ Y  M+ +G+ P   +F  ++  LC A +  +A  + + ++  
Sbjct: 428 IILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKY 487

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
                     A+V     AG   KA +L
Sbjct: 488 GHTPGPGTCDAVVSAYCRAGMIQKADEL 515



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/318 (23%), Positives = 143/318 (44%), Gaps = 7/318 (2%)

Query: 287 SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALD 346
           +P  + +  +I G   A     A      + ++ H PD + +  L+  LSK     DA+ 
Sbjct: 2   NPGTLLHNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKARRLRDAVQ 60

Query: 347 VYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFC 403
           V   ++  + VPD+ T   ++ ++CL  R     +LV  +    + A+ + Y+AL+   C
Sbjct: 61  VLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLC 120

Query: 404 KAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAH 463
           K    ++AV L  TM ++G  P   ++  ++ G C AR++DEA    + +V      +  
Sbjct: 121 KCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDII 180

Query: 464 VHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM 523
            +TA++    ++    + ++L        +  D+V+Y+  I GL + GR  +A  ++ +M
Sbjct: 181 TYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM 240

Query: 524 KHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSS 583
              +  P A TY  ++  +C+  ++    RLL  ++D +   D  T   L     K    
Sbjct: 241 ---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRL 297

Query: 584 SSAVNQLVEMCNLGLIPD 601
             A     +M    L PD
Sbjct: 298 DDAYELFQQMVANKLSPD 315



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 41/190 (21%), Positives = 76/190 (40%), Gaps = 6/190 (3%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR E    ++ E+ R GC     T+   +  Y +        E   +    GF PNT   
Sbjct: 330 GRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTY 389

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQ-----LPNFLS-FNIALCNLCKLNDVSNVKDVIGMM 211
           NI++    + GR D  ++ L +        P  ++ + I L  LC+     +       M
Sbjct: 390 NILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEM 449

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
           +++G+ P    F  ++   CK  +  +A++LL  MI  G +        ++  + R   +
Sbjct: 450 IQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMI 509

Query: 272 DMAGYLWEKM 281
             A  L  ++
Sbjct: 510 QKADELASEL 519


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/513 (22%), Positives = 244/513 (47%), Gaps = 17/513 (3%)

Query: 49  APHIVHSTLL---NCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTG--RFETV 103
           A   VH +L+   N  +   +LSFF W    R  F    S+D+   +        + +  
Sbjct: 11  AKRFVHRSLVVRGNAATVSPSLSFF-W----RRAFSGKTSYDYREKLSRNGLSELKLDDA 65

Query: 104 RGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDV 163
             + GE+ +         F   L    +   + +V+   ++M   G   N +  +I+++ 
Sbjct: 66  VALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNC 125

Query: 164 LFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN 219
             +  ++ L +    K++K    P+ ++ +  L   C    +S    ++  MV  G+ P+
Sbjct: 126 FCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPD 185

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
              F  L++      + +EA  L+  M+  G    +  +  +++G  +   +D+A  L +
Sbjct: 186 TVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLK 245

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
           KM +     NVV Y ++I G  + K    AF   + +E++G  PD+  +N LI CL   G
Sbjct: 246 KMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYG 305

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYN 396
            + DA  +   ++E K+ P+  TF SL+      G+     KL   +    ++ ++V YN
Sbjct: 306 RWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYN 365

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
           +L++ FC     ++A +++  M+ K   PD  ++  L++G C A++++E + +++ +   
Sbjct: 366 SLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQR 425

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
               N   +  ++  L +AG C  A ++F++ + +  P D+++Y++ + GL + G+ E+A
Sbjct: 426 GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKA 485

Query: 517 YILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
            +++  ++   + PN YTY +M+   CK   ++
Sbjct: 486 LVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVE 518



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 117/488 (23%), Positives = 229/488 (46%), Gaps = 11/488 (2%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
           A++ F    K R  F  +  F  ++S + ++  +F+ V  +  ++  +G      T+ + 
Sbjct: 65  AVALFGEMVKSRP-FPSIIEFSKLLSAIAKMN-KFDVVISLGEQMQNLGIPHNHYTYSIL 122

Query: 126 LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET----Q 181
           L  + R     + L    +M + G+ P+    + +++      R+   + ++ +      
Sbjct: 123 LNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGY 182

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
            P+ ++FN  +  L   N  S    +I  MV +G  P++  +  ++N  CK G I  A  
Sbjct: 183 KPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 242

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           LL  M       +V  +  +IDG  + + +D A  L+ KM   G  P+V TY SLI    
Sbjct: 243 LLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLC 302

Query: 302 EAKMFSIAFSFL-DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
               +S A   L DM+E + + P++V  N LID  +K G   +A  ++D +++  + P+ 
Sbjct: 303 NYGRWSDASRLLSDMIERKIN-PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 361

Query: 361 YTFCSLLSTVCLSGRFSLLPK---LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
            T+ SL++  C+  R     +   L+   +   D+V YN L+  FCKA    + ++L+  
Sbjct: 362 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFRE 421

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           M  +G   +  ++  L++GL  A   D A  +++ +V +    +   ++ ++D L + G+
Sbjct: 422 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 481

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
             KA+ +F      K   ++ +Y + I G+ + G+ E+ + L+  +    V PN   Y  
Sbjct: 482 LEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 541

Query: 538 MLLSFCKE 545
           M+  FC++
Sbjct: 542 MISGFCRK 549



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 126/536 (23%), Positives = 229/536 (42%), Gaps = 45/536 (8%)

Query: 51  HIVHSTLLNC-------PSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTG----- 98
           H  +S LLNC       P  L  L   +    + D          ++++ + L G     
Sbjct: 116 HYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPD----------IVTLSSLLNGYCHGK 165

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           R      +V ++  +G      TF   +   +        +   D M   G  P+ F   
Sbjct: 166 RISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYG 225

Query: 159 IVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
            V++ L K G +DL + +LK+ +      N + +N  +  LCK   + +  D+   M  K
Sbjct: 226 TVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETK 285

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           G  P+V  +  L++C C  GR ++A +LL  MI    + +V  +  LID F +  +L  A
Sbjct: 286 GIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEA 345

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             L+++M+Q    PN+VTY SLI GF        A     ++ S+   PD+V +N LI  
Sbjct: 346 EKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKG 405

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEAD 391
             K    ++ ++++  + +  LV ++ T+ +L+  +  +G   +  K+   +    V  D
Sbjct: 406 FCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD 465

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
           ++ Y+ LL   CK G   +A+ ++  +      P+ Y++  ++ G+C A K+++  +++ 
Sbjct: 466 IITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFC 525

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
            + +     N  ++T ++      G   +A  LFR    +    D   Y   IR  L  G
Sbjct: 526 SLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDG 585

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
               +  L  +M+      +A T             I MV  +L    D R+E  Y
Sbjct: 586 DKAASAELIKEMRSCGFVGDAST-------------ISMVINMLH---DGRLEKSY 625



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 103/435 (23%), Positives = 200/435 (45%), Gaps = 42/435 (9%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ---LP-NFLSFNIALCNLCK 197
           F EM +    P+    + ++  + K+ + D+ I + ++ Q   +P N  +++I L   C+
Sbjct: 69  FGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCR 128

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            + +     V+G M++ G+ P++     LLN +C   RI+EA  L+  M+ +G       
Sbjct: 129 RSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVT 188

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  LI G     +   A  L ++MV  GC P++ TY +++ G  +     +A S L  +E
Sbjct: 189 FNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKME 248

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
                 ++V +N +ID L K    DDA D+++ +    + PD +T+ SL+S +C  GR+S
Sbjct: 249 KGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWS 308

Query: 378 LLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
              +L+  +   ++  ++V +N+L+  F K G   +A KL++ M+ +   P+  ++  L+
Sbjct: 309 DASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLI 368

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            G C   ++DEA                                    Q+F   + +   
Sbjct: 369 NGFCMHDRLDEAQ-----------------------------------QIFTLMVSKDCL 393

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
            DVV+Y   I+G  +  R EE   L+ +M    +  N  TY  ++    +  +  M +++
Sbjct: 394 PDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 453

Query: 555 LQDVIDARIELDYHT 569
            + ++   +  D  T
Sbjct: 454 FKKMVSDGVPPDIIT 468



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 100/399 (25%), Positives = 189/399 (47%), Gaps = 5/399 (1%)

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
           + G MV+   +P++  F  LL+   KM +      L   M  LG   +   +++L++ F 
Sbjct: 68  LFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFC 127

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
           R  +L +A  +  KM++ G  P++VT +SL+ G+   K  S A + +D +   G+ PD V
Sbjct: 128 RRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTV 187

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKL 382
             N LI  L       +A+ + D ++     PD +T+ ++++ +C  G      SLL K+
Sbjct: 188 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 247

Query: 383 VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
             G ++EA++V+YN ++   CK    + A  L+N M  KG  PD +++  L+  LC   +
Sbjct: 248 EKG-KIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGR 306

Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTV 502
             +A  +   ++      N     +++D   + G+  +A +LF   I      ++V+Y  
Sbjct: 307 WSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNS 366

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
            I G     R +EA  +++ M      P+  TY  ++  FCK + ++    L +++    
Sbjct: 367 LINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRG 426

Query: 563 IELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           +  +  T   L + +F+      A     +M + G+ PD
Sbjct: 427 LVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD 465


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 130/505 (25%), Positives = 235/505 (46%), Gaps = 45/505 (8%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCN-----LC 196
           F EM   G  P+    N +++  +K+  ++   ++L E +  N L+ N  +C      LC
Sbjct: 395 FSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKEN-LTANAYMCGAIVNGLC 453

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
              D++   ++   M+  G  PN+ ++  ++    K GR  EA ++LG+M   G S  V 
Sbjct: 454 HCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVF 513

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA-KMFSIAFSFLDM 315
            +  +I GF +  +++       +M+  G  PNV TY + I G+  A +M +   SF++M
Sbjct: 514 CYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEM 573

Query: 316 LES----------------------------------EGHAPDLVFHNVLIDCLSKMGSY 341
           L+S                                  +G  PD+  H+VLI  LSK G  
Sbjct: 574 LDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKL 633

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNAL 398
            +A+ V+  LL+  LVPD +T+ SL+S +C  G      +L   +C   +  ++V YNAL
Sbjct: 634 QEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNAL 693

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           ++  CK G   +A +L++ + +KG   ++ ++  ++ G C +  + EA  ++ G+ +   
Sbjct: 694 INGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGV 753

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
             ++ V+ A++D   +AG   KA+ LF   +VE+      ++   I G  + G+  EAY 
Sbjct: 754 PPDSFVYCALIDGCCKAGNTEKALSLF-LGMVEEGIASTPAFNALIDGFFKLGKLIEAYQ 812

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
           L   M    + PN  TY +++   C   NIK  ++L  ++    +  +  T   L     
Sbjct: 813 LVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYN 872

Query: 579 KFHSSSSAVNQLVEMCNLGLIPDEM 603
           +    S   +   EM   G+ PD++
Sbjct: 873 RIGRRSEMFSLFDEMVARGIKPDDL 897



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 100/449 (22%), Positives = 206/449 (45%), Gaps = 42/449 (9%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDV 207
           P+ +    +++   ++G+V+ G  VL + +    +PN +++++ +  LC+  DV    ++
Sbjct: 230 PDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALEL 289

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF-- 265
              M  KG  P+  ++  L++ FC+  R  E   +L  M T+G      A+T LI+GF  
Sbjct: 290 KRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVK 349

Query: 266 ----------------RRLR-----------------RLDMAGYLWEKMVQNGCSPNVVT 292
                           R+++                  L+ A  L+ +M   G  P++ T
Sbjct: 350 QSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQT 409

Query: 293 YTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
           Y  LI+G+ + +    A+  L  ++ E    +      +++ L   G    A +++  ++
Sbjct: 410 YNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMI 469

Query: 353 ELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPN 409
              L P+   + +++  +   GRF    K++  ++ +    D+  YN ++  FCKAG   
Sbjct: 470 SWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKME 529

Query: 410 QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
           +       M+ KG  P+ Y++   + G C A ++  A   +  ++ +  A N  + T ++
Sbjct: 530 EGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLI 589

Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
           D   + G   KA   FR  + +    DV +++V I GL + G+ +EA  ++S++    + 
Sbjct: 590 DGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLV 649

Query: 530 PNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           P+ +TY  ++ + CKE ++K    L  D+
Sbjct: 650 PDVFTYTSLISNLCKEGDLKAAFELHDDM 678



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 121/495 (24%), Positives = 202/495 (40%), Gaps = 76/495 (15%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL---KETQL-PNFLSFNIALCNL 195
           E F EM  +G  PN      ++  L K GR +  IK+L   K+  L P+   +N  +   
Sbjct: 463 ELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGF 522

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNV-----------RMFEI------------------- 225
           CK   +   K  +  M+ KG  PNV           R  E+                   
Sbjct: 523 CKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPND 582

Query: 226 -----LLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
                L++ +CK G   +A+     M+  G    V   +VLI G  +  +L  A  ++ +
Sbjct: 583 VICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSE 642

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           ++  G  P+V TYTSLI    +      AF   D +  +G  P++V +N LI+ L K+G 
Sbjct: 643 LLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGE 702

Query: 341 YDDALDVYDGLLE--------------------------------LKLV---PDSYTFCS 365
              A +++DG+ E                                +KLV   PDS+ +C+
Sbjct: 703 IAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCA 762

Query: 366 LLSTVCLSGRFSLLPKLVCGLEVE--ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           L+   C +G       L  G+  E  A    +NAL+  F K G   +A +L   M+D   
Sbjct: 763 LIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHI 822

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
           TP++ ++  L+   C    I EA  ++  +   N   N   +T+++      GR  +   
Sbjct: 823 TPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFS 882

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           LF   +      D ++++V +   L+ G   +A  L   M    V      Y +++ + C
Sbjct: 883 LFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALC 942

Query: 544 KERNIKMVKRLLQDV 558
           K  N+  V ++L +V
Sbjct: 943 KHNNLSEVLKVLDEV 957



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 109/450 (24%), Positives = 194/450 (43%), Gaps = 39/450 (8%)

Query: 159 IVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCN-----LCKLNDVSNVKDVIGMMVR 213
           I++D+  K G ++  + V    +   F+   +A CN     L K N V     V   M+ 
Sbjct: 168 ILIDIYRKKGFLNEAVSVFLGAKTNEFI-VGLACCNSLSKDLLKGNRVELFWKVYKGML- 225

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
               P+V  +  L+N +C++G++ E   +L  M   G   ++  ++V+I G  R   +D 
Sbjct: 226 GAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDE 285

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L   M   G  P+   Y +LI GF   K  +   S LD + + G  PD V +  LI+
Sbjct: 286 ALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALIN 345

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLV 393
              K      A  V + +   K+  +++T                               
Sbjct: 346 GFVKQSDIGGAFQVKEEMFARKIKLNTFT------------------------------- 374

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            Y AL+   CK G   +A  L++ M   G  PD  ++  L+ G    + +++A  +   I
Sbjct: 375 -YYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEI 433

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
              N   NA++  AIV+ L   G   +A +LF+  I      ++V YT  ++GL++ GR 
Sbjct: 434 KKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRF 493

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
           EEA  +   MK   + P+ + Y  +++ FCK   ++  K  L ++I   ++ + +T    
Sbjct: 494 EEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAF 553

Query: 574 TKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
                +     +A    +EM + G+ P+++
Sbjct: 554 IHGYCRAGEMQAAERSFIEMLDSGIAPNDV 583



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/356 (21%), Positives = 159/356 (44%), Gaps = 10/356 (2%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCK 197
           F E+   G  P+ F    ++  L K G +    +L   + K+   PN +++N  +  LCK
Sbjct: 640 FSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCK 699

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
           L +++  +++   +  KG   N   +  ++  +CK   + EA+QL   M  +G       
Sbjct: 700 LGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFV 759

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  LIDG  +    + A  L+  MV+ G + +   + +LI GF +      A+  ++ + 
Sbjct: 760 YCALIDGCCKAGNTEKALSLFLGMVEEGIA-STPAFNALIDGFFKLGKLIEAYQLVEDMV 818

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-- 375
                P+ V + +LI+    +G+  +A  ++  + +  ++P+  T+ SLL      GR  
Sbjct: 819 DNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRS 878

Query: 376 --FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
             FSL  ++V    ++ D + ++ ++    K G   +A+KL + ML +G       +  L
Sbjct: 879 EMFSLFDEMV-ARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTIL 937

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
           +  LC    + E + V   +      ++      +V     AGR  +A+++    +
Sbjct: 938 IDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESMV 993



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 90/391 (23%), Positives = 166/391 (42%), Gaps = 48/391 (12%)

Query: 73  CAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRG 132
           C   +    DVQ+   +I  +++  G+ +   G+  EL   G V    T+   +    + 
Sbjct: 607 CMLDQGVLPDVQTHSVLIHGLSK-NGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKE 665

Query: 133 EMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSF 188
                  E  D+M + G  PN    N +++ L K+G +    +L   + ++    N +++
Sbjct: 666 GDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTY 725

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           +  +   CK  +++    +   M   G  P+  ++  L++  CK G   +A  L   M+ 
Sbjct: 726 STIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVE 785

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN------------------- 289
            G + S  A+  LIDGF +L +L  A  L E MV N  +PN                   
Sbjct: 786 EGIA-STPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKE 844

Query: 290 ----------------VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
                           V+TYTSL+ G+      S  FS  D + + G  PD +  +V++D
Sbjct: 845 AEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVD 904

Query: 334 CLSKMGSYDDALDVYDGLLE--LKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA- 390
              K G++  AL + D +L   + +  + YT   L+  +C     S + K++  +E +  
Sbjct: 905 AHLKEGNWIKALKLVDDMLSEGVNVCKNLYTI--LIDALCKHNNLSEVLKVLDEVEKQGS 962

Query: 391 --DLVVYNALLSYFCKAGFPNQAVKLYNTML 419
              L     L+  F +AG  ++A+++  +M+
Sbjct: 963 KLSLATCGTLVCCFHRAGRTDEALRVLESMV 993



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 49/242 (20%), Positives = 91/242 (37%), Gaps = 36/242 (14%)

Query: 395 YNALLSYFCKAGFPNQAV-----------------------------------KLYNTML 419
           +  L+  + K GF N+AV                                   K+Y  ML
Sbjct: 166 FEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLLKGNRVELFWKVYKGML 225

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
                PD Y++  L+   C   K++E  +V   +       N   ++ ++  L  AG   
Sbjct: 226 G-AIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVD 284

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
           +A++L R    +    D   Y   I G     R+ E   +  +M  + + P+   Y  ++
Sbjct: 285 EALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALI 344

Query: 540 LSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLI 599
             F K+ +I    ++ +++   +I+L+  T   L   + K      A +   EM  +G+ 
Sbjct: 345 NGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIK 404

Query: 600 PD 601
           PD
Sbjct: 405 PD 406



 Score = 42.0 bits (97), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 68/158 (43%), Gaps = 35/158 (22%)

Query: 127 RIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFL 186
           RI  R EM+ +    FDEM   G  P+  A ++++D   K G     IK LK   + + L
Sbjct: 873 RIGRRSEMFSL----FDEMVARGIKPDDLAWSVMVDAHLKEGNW---IKALK--LVDDML 923

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           S  +   N+CK                        ++ IL++  CK   ++E  ++L  +
Sbjct: 924 SEGV---NVCK-----------------------NLYTILIDALCKHNNLSEVLKVLDEV 957

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN 284
              G+ LS+     L+  F R  R D A  + E MV++
Sbjct: 958 EKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESMVRS 995


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 143/578 (24%), Positives = 270/578 (46%), Gaps = 18/578 (3%)

Query: 39  TTHQDFPIILAPHIVHSTLLNC----PSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVT 94
           TT  +    L+P+   + LL+           +  F W +KQ ++      F  ++  + 
Sbjct: 41  TTTTNSATRLSPNFTPTQLLHSLRREEDSSAVIHLFYWASKQPNFKPSSSIFKEVLHKLG 100

Query: 95  RLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMG-RFGFTPN 153
           +  G F+ ++ I+ E+     VI   + L+F+  Y    +Y  +L+  D M   FG   N
Sbjct: 101 K-AGEFDAMKDILKEMKISLSVIDNDSLLVFIESYASFGLYNEILQFVDAMEVEFGVVAN 159

Query: 154 TFARNIVMDVLFKIGRVDLGIKVLKETQL-----PNFLSFNIALCNLCKLNDVSNVKDVI 208
           T   N +++VL    ++ L +++     +     P+  +FNI +  LC+ + +     ++
Sbjct: 160 THFYNFLLNVLVDGNKLKL-VEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLM 218

Query: 209 GMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRL 268
             M   G  P+ + F  ++  F + G +  A ++   M+  G  ++     VL++GF + 
Sbjct: 219 EEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKE 278

Query: 269 RRLDMAGYLWEKM-VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
            R++ A    E+M ++ G  P+  T+  L+ G  +      A   +DM+  EG  PD+  
Sbjct: 279 GRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYT 338

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VC 384
           +N LI  L K+G  D+A+ V + ++E    P++ T+ +++ST+C   +     KL   + 
Sbjct: 339 YNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLT 398

Query: 385 GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
           G  +  D+  YN+L+   C +     A++LY  M  KG  PD +++  L+  LC   K+ 
Sbjct: 399 GKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQ 458

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
           EA+N+ + + ++  A N   +  ++D   +  R  +A ++F +  ++    + V+Y   I
Sbjct: 459 EALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLI 518

Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
            GL +  R EEA  L  QM    + P+ +TY  +L  FCK  +IK    ++Q +     E
Sbjct: 519 DGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCE 578

Query: 565 LDYHTSIRLTKFIFKFHSSSSAVNQL--VEMCNLGLIP 600
            D  T   L   + K     +A   L  ++M  + L P
Sbjct: 579 PDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTP 616



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 188/387 (48%), Gaps = 11/387 (2%)

Query: 136 GMVLEAF---DEMG-RFGFTPNTFARNIVMDVLFKIGRVDLGIKV----LKETQLPNFLS 187
           G + EA    +EM  R GF P+ +  N++++ L K G V   ++V    L+E   P+  +
Sbjct: 279 GRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYT 338

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           +N  +  LCKL +V     V+  M+ +   PN   +  +++  CK  ++ EA +L  ++ 
Sbjct: 339 YNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLT 398

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
             G    V  +  LI G    R   +A  L+++M   GC P+  TY  LI          
Sbjct: 399 GKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQ 458

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A + L  +E  G A +++ +N LID   K     +A +++D +    +  +S T+ +L+
Sbjct: 459 EALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLI 518

Query: 368 STVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
             +C S R     +L+  + +E    D   YN+LL+YFCKAG   +A  +  TM   G  
Sbjct: 519 DGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCE 578

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           PD  ++  L+ GLC A +++ A  + + I M    +  H +  ++  L    R  +A++L
Sbjct: 579 PDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRL 638

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGG 511
           FR  I +    D V+Y +  RGL +GG
Sbjct: 639 FREMIEKAEAPDAVTYKIVFRGLCQGG 665



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/387 (25%), Positives = 192/387 (49%), Gaps = 8/387 (2%)

Query: 166 KIGRVDLGIKVLKETQL-----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV 220
           K GR++  ++ ++E  L     P+  +FN+ +  L K   V +  +V+ MM+R+GF P++
Sbjct: 277 KEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDI 336

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
             +  L++  CK+G + EA ++L  MI    S +   +  +I    +  +++ A  L   
Sbjct: 337 YTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALV 396

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           +   G  P+V TY SLI+G   ++  ++A      ++++G  PD   +N+LID L   G 
Sbjct: 397 LTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGK 456

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNA 397
             +AL++   +       +  T+ +L+   C + R +   ++   +E++    + V YN 
Sbjct: 457 LQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNT 516

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
           L+   CK+    +A +L + M+ +G  PD +++  LL   C A  I +A ++ Q +  + 
Sbjct: 517 LIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDG 576

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAY 517
              +   +  ++  L +AGR   A +L R   ++   L   +Y   I+ L    R++EA 
Sbjct: 577 CEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAV 636

Query: 518 ILYSQMKHIAVPPNAYTYRVMLLSFCK 544
            L+ +M   A  P+A TY+++    C+
Sbjct: 637 RLFREMIEKAEAPDAVTYKIVFRGLCQ 663



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 103/395 (26%), Positives = 175/395 (44%), Gaps = 44/395 (11%)

Query: 98  GRFETVRGIVGELA-RVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           GR E     + E++ R G      TF + +    +       LE  D M R GF P+ + 
Sbjct: 279 GRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYT 338

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVK------- 205
            N ++  L K+G VD  +KVL +       PN +++N  +  LCK N V           
Sbjct: 339 YNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLT 398

Query: 206 ----------------------------DVIGMMVRKGFYPNVRMFEILLNCFCKMGRIA 237
                                       ++   M  KG +P+   + +L++  C  G++ 
Sbjct: 399 GKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQ 458

Query: 238 EAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLI 297
           EA  LL  M   G + +V  +  LIDGF + +R+  A  ++++M   G S N VTY +LI
Sbjct: 459 EALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLI 518

Query: 298 KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
            G  +++    A   +D +  EG  PD   +N L+    K G    A D+   +      
Sbjct: 519 DGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCE 578

Query: 358 PDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA-DLV--VYNALLSYFCKAGFPNQAVKL 414
           PD  T+ +L++ +C +GR     KL+  ++++  +L    YN ++    +     +AV+L
Sbjct: 579 PDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRL 638

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLC-GARKIDEAIN 448
           +  M++K   PD  ++  + RGLC G   I EA++
Sbjct: 639 FREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVD 673


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 124/492 (25%), Positives = 230/492 (46%), Gaps = 46/492 (9%)

Query: 122 FLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL---- 177
           F  FL  + + + Y  V+   ++M  F  T N ++ NI+++ L ++  VD  + VL    
Sbjct: 96  FGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMF 155

Query: 178 -----------------------------------KETQLPNFLSFNIALCNLCKLNDVS 202
                                              K    PN +S+   +  LCK  + S
Sbjct: 156 KLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTS 215

Query: 203 NVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLI 262
              DV   M + G  PNV  +  +++  CK   + +A + L  M+  G   +V  +  ++
Sbjct: 216 MAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIV 275

Query: 263 DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
            GF  L +L+ A  L+++MV     PN VT+T L+ G  +  M S A    + +  +G  
Sbjct: 276 HGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVE 335

Query: 323 PDLVFHNVLID--CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
           PD+  +N L+D  CL ++   ++A  V++ ++     P ++++  L++  C S R     
Sbjct: 336 PDISTYNALMDGYCLQRL--MNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAK 393

Query: 381 KLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
            L+  +  +A   D V Y+ L+   C+ G P +A+ L+  M   G  P+  ++V LL G 
Sbjct: 394 SLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGF 453

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
           C    +DEA+ + + +       N   +T +++ +  AG+   A +LF +   +    D+
Sbjct: 454 CKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDI 513

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
            +YTV I+GLL+ G ++EAY L+ +M+     PN+ +Y VM+  F + ++     RL+ +
Sbjct: 514 RTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDE 573

Query: 558 VIDARIELDYHT 569
           ++  R  ++  T
Sbjct: 574 MVGKRFSVNLST 585



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 118/449 (26%), Positives = 218/449 (48%), Gaps = 7/449 (1%)

Query: 184 NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
           N  S NI +  LC+LN V     V+G M + G +P+   F  L+N  C  G+I EA +L 
Sbjct: 127 NVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELF 186

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
             M+  G   +V ++T +I+G  +     MA  +++KM QNGC PNVVTY+++I    + 
Sbjct: 187 NEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKD 246

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
           ++ + A  FL  +   G  P++  +N ++     +G  ++A  ++  ++   ++P++ TF
Sbjct: 247 RLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTF 306

Query: 364 CSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
             L+  +C  G  S   L+ + +    VE D+  YNAL+  +C     N+A K++  M+ 
Sbjct: 307 TILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIR 366

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
           KG  P  +S+  L+ G C +R++DEA ++   +       +   ++ ++  L + GR  +
Sbjct: 367 KGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKE 426

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
           A+ LF+         ++V+Y + + G  + G  +EA  L   MK   + PN   Y +++ 
Sbjct: 427 ALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIE 486

Query: 541 SFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
                  +++ K L   +       D  T   + K + K   S  A +   +M + G +P
Sbjct: 487 GMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLP 546

Query: 601 DEMWRKL---GLLSDE-TMTPVSLFDGFV 625
           +     +   G L ++ + T + L D  V
Sbjct: 547 NSCSYNVMIQGFLQNQDSSTAIRLIDEMV 575



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 120/482 (24%), Positives = 232/482 (48%), Gaps = 11/482 (2%)

Query: 68  SFFIWCAKQRDYF---HDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLL 124
           S  +    Q D F   H+V S + +I+ + RL    +    ++G++ ++G    A TF  
Sbjct: 110 STVVSLCNQMDLFRVTHNVYSLNILINCLCRLN-HVDFSVSVLGKMFKLGIHPDAITFNA 168

Query: 125 FLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-- 182
            +            +E F+EM + G  PN  +   V++ L K G   + + V K+ +   
Sbjct: 169 LINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNG 228

Query: 183 --PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAY 240
             PN ++++  + +LCK   V++  + +  MV +G  PNV  +  +++ FC +G++ EA 
Sbjct: 229 CKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEAT 288

Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
           +L   M+      +   +T+L+DG  +   +  A  ++E M + G  P++ TY +L+ G+
Sbjct: 289 RLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGY 348

Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
              ++ + A    +++  +G AP    +N+LI+   K    D+A  +   +    L PD+
Sbjct: 349 CLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDT 408

Query: 361 YTFCSLLSTVCLSGRFSL---LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
            T+ +L+  +C  GR      L K +C      +LV Y  LL  FCK G  ++A+KL  +
Sbjct: 409 VTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKS 468

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           M +K   P+   +  L+ G+  A K++ A  ++  +  +    +   +T ++  L++ G 
Sbjct: 469 MKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGL 528

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
             +A  LFR+   + +  +  SY V I+G L+   +  A  L  +M       N  T+++
Sbjct: 529 SDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQM 588

Query: 538 ML 539
           +L
Sbjct: 589 LL 590



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/402 (23%), Positives = 189/402 (47%), Gaps = 8/402 (1%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
           +R +  +V S+  +I+ + + TG       +  ++ + GC     T+   +    +  + 
Sbjct: 191 KRGHEPNVISYTTVINGLCK-TGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLV 249

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE----TQLPNFLSFNIA 191
              +E   EM   G  PN F  N ++     +G+++   ++ KE      +PN ++F I 
Sbjct: 250 NDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTIL 309

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           +  LCK   VS  + V   M  KG  P++  +  L++ +C    + EA ++  +MI  G 
Sbjct: 310 VDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGC 369

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
           +   +++ +LI+G+ + RR+D A  L  +M     +P+ VTY++L++G  +      A +
Sbjct: 370 APGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALN 429

Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
               + S G  P+LV + +L+D   K G  D+AL +   + E KL P+   +  L+  + 
Sbjct: 430 LFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMF 489

Query: 372 LSGRFSLLPKLVC---GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
           ++G+  +  +L     G     D+  Y  ++    K G  ++A  L+  M D GF P++ 
Sbjct: 490 IAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSC 549

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
           S+  +++G    +    AI +   +V    +VN      ++D
Sbjct: 550 SYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLD 591



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/392 (24%), Positives = 177/392 (45%), Gaps = 38/392 (9%)

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           MVR    P+V  F   L  F K  + +    L   M     + +V +  +LI+   RL  
Sbjct: 84  MVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNH 143

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           +D +  +  KM + G  P+ +T+ +LI G         A    + +   GH P+++ +  
Sbjct: 144 VDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTT 203

Query: 331 LIDCLSKMGSYDDALDVY-------------------DGLLELKLV-------------- 357
           +I+ L K G+   A+DV+                   D L + +LV              
Sbjct: 204 VINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERG 263

Query: 358 --PDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAV 412
             P+ +T+ S++   C  G+ +   +L   + G +V  + V +  L+   CK G  ++A 
Sbjct: 264 IPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEAR 323

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
            ++ TM +KG  PD  ++  L+ G C  R ++EA  V++ ++    A  AH +  +++  
Sbjct: 324 LVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGY 383

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
            ++ R  +A  L      +    D V+Y+  ++GL + GR +EA  L+ +M      PN 
Sbjct: 384 CKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNL 443

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
            TY ++L  FCK  ++    +LL+ + + ++E
Sbjct: 444 VTYVILLDGFCKHGHLDEALKLLKSMKEKKLE 475



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/334 (22%), Positives = 155/334 (46%), Gaps = 3/334 (0%)

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           +D A   + +MV+    P+VV +   +  F + K +S   S  + ++      ++   N+
Sbjct: 74  VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV-- 388
           LI+CL ++   D ++ V   + +L + PD+ TF +L++ +C  G+     +L   +    
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193

Query: 389 -EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
            E +++ Y  +++  CK G  + AV ++  M   G  P+  ++  ++  LC  R +++A+
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
                +V      N   + +IV      G+ ++A +LF+  +      + V++T+ + GL
Sbjct: 254 EFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGL 313

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
            + G   EA +++  M    V P+  TY  ++  +C +R +   K++ + +I        
Sbjct: 314 CKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGA 373

Query: 568 HTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           H+   L     K      A + L EM +  L PD
Sbjct: 374 HSYNILINGYCKSRRMDEAKSLLAEMYHKALNPD 407



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 101/232 (43%), Gaps = 4/232 (1%)

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
           + R GC   A ++ + +  Y +            EM      P+T   + +M  L ++GR
Sbjct: 364 MIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGR 423

Query: 170 VDLGIKVLKET----QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEI 225
               + + KE       PN +++ I L   CK   +     ++  M  K   PN+  + I
Sbjct: 424 PKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTI 483

Query: 226 LLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
           L+      G++  A +L   +   GT   +  +TV+I G  +    D A  L+ KM  +G
Sbjct: 484 LIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDG 543

Query: 286 CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
             PN  +Y  +I+GF++ +  S A   +D +  +  + +L    +L+D  S+
Sbjct: 544 FLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLDLESQ 595


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 128/512 (25%), Positives = 240/512 (46%), Gaps = 46/512 (8%)

Query: 68  SFFIWCAKQRDYF---HDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLL 124
           S  +    Q D F   H+V S + +I+ + RL    +    I+G++ ++G    A TF  
Sbjct: 105 STVVSLCNQMDLFGVTHNVYSLNVLINCLCRLN-HVDFAVSILGKMFKLGIHPTASTFNA 163

Query: 125 FLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-- 182
            +            +E F+EM R G  PN  + N +++ L K G   + + V K+ +   
Sbjct: 164 LINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNG 223

Query: 183 --PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAY 240
             P+ +++N  + +LCK   V++  + +  M+ +G  PNV  +  +++ FC +G++ EA 
Sbjct: 224 CKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEAT 283

Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
           +L   M+           T+L+DG  +   +  A  ++E M + G  PN+ TY +L+ G+
Sbjct: 284 RLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGY 343

Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
              ++ + A    +++  +G AP +  +N+LI+   K    D+A  +   +    L PD+
Sbjct: 344 CLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDT 403

Query: 361 YTFCSLLSTVCLSGRFSL---LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
            T+ +L+  +C  GR      + K +C   +  +LV Y+ LL  FCK G  ++A+KL  +
Sbjct: 404 VTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKS 463

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           M +K   P                                   N   HT +++ +  AG+
Sbjct: 464 MQEKKLEP-----------------------------------NIVHHTILIEGMFIAGK 488

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
              A +LF +   +     + +YTV I+GLL+ G ++EAY L+ +M+     PN+ +Y V
Sbjct: 489 LEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNV 548

Query: 538 MLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
           M+  F + ++     RL+ +++  R   +  T
Sbjct: 549 MIQGFLQNQDSSTAIRLIDEMVGKRFSANLST 580



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/392 (26%), Positives = 194/392 (49%), Gaps = 5/392 (1%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+   F   L +  K    S V  +   M   G   NV    +L+NC C++  +  A  +
Sbjct: 86  PSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSI 145

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           LG M  LG   + + +  LI+G     ++  A  L+ +MV+ G  PNV++Y ++I G  +
Sbjct: 146 LGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCK 205

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
               S+A      +E  G  PD+V +N +ID L K    +DA++    +L+  + P+ +T
Sbjct: 206 TGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFT 265

Query: 363 FCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
           +  ++   C+ G+ +   +L   + G +V  D V    L+   CK G  ++A  ++ TM 
Sbjct: 266 YNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMT 325

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
           +KG  P+  ++  L+ G C  R ++EA  V++ ++    A   H +  +++   ++ R  
Sbjct: 326 EKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMD 385

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
           +A  L      +    D V+Y+  ++GL + GR +EA  ++ +M    + PN  TY ++L
Sbjct: 386 EAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILL 445

Query: 540 LSFCKERNIKMVKRLLQDVIDARIELD--YHT 569
             FCK  ++    +LL+ + + ++E +  +HT
Sbjct: 446 DGFCKHGHLDEALKLLKSMQEKKLEPNIVHHT 477



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 117/511 (22%), Positives = 233/511 (45%), Gaps = 38/511 (7%)

Query: 122 FLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ 181
           F  FL  + + + Y  V+   ++M  FG T N ++ N++++ L                 
Sbjct: 91  FGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCL----------------- 133

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
                         C+LN V     ++G M + G +P    F  L+N  C  G+I EA +
Sbjct: 134 --------------CRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVE 179

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           L   M+  G   +V ++  +I+G  +     MA  +++KM QNGC P+VVTY ++I    
Sbjct: 180 LFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLC 239

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           + ++ + A  FL  +   G  P++  +N ++     +G  ++A  ++  ++   ++PD+ 
Sbjct: 240 KDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTV 299

Query: 362 TFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           T   L+  +C  G  S   L+ + +    VE ++  YNAL+  +C     N+A K++  M
Sbjct: 300 TLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIM 359

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
           + +G  P  +S+  L+ G C +R++DEA ++   +       +   ++ ++  L + GR 
Sbjct: 360 IRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRP 419

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            +A+ +F+         ++V+Y++ + G  + G  +EA  L   M+   + PN   + ++
Sbjct: 420 KEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTIL 479

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGL 598
           +        +++ K L   +    I     T   + K + K   S  A +   +M + G 
Sbjct: 480 IEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGF 539

Query: 599 IPDEMWRKL---GLLSDE-TMTPVSLFDGFV 625
           +P+     +   G L ++ + T + L D  V
Sbjct: 540 LPNSCSYNVMIQGFLQNQDSSTAIRLIDEMV 570



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/402 (23%), Positives = 189/402 (47%), Gaps = 8/402 (1%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
           +R +  +V S++ +I+ + + TG       +  ++ + GC     T+   +    +  + 
Sbjct: 186 RRGHEPNVISYNTIINGLCK-TGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLV 244

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE----TQLPNFLSFNIA 191
              +E   EM   G  PN F  N ++     +G+++   ++ KE      +P+ ++  I 
Sbjct: 245 NDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTIL 304

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           +  LCK   VS  + V   M  KG  PN+  +  L++ +C    + EA ++  +MI  G 
Sbjct: 305 VDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGC 364

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
           +  V+++ +LI+GF + RR+D A  L  +M     +P+ VTY++L++G  +      A +
Sbjct: 365 APGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALN 424

Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
               + S G  P+LV +++L+D   K G  D+AL +   + E KL P+      L+  + 
Sbjct: 425 IFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMF 484

Query: 372 LSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
           ++G+  +  +L   L    +   +  Y  ++    K G  ++A  L+  M D GF P++ 
Sbjct: 485 IAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSC 544

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
           S+  +++G    +    AI +   +V    + N      ++D
Sbjct: 545 SYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLLD 586



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 53/232 (22%), Positives = 100/232 (43%), Gaps = 4/232 (1%)

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
           + R GC     ++ + +  + +            EM      P+T   + +M  L + GR
Sbjct: 359 MIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGR 418

Query: 170 VDLGIKVLKET----QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEI 225
               + + KE      LPN ++++I L   CK   +     ++  M  K   PN+    I
Sbjct: 419 PKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTI 478

Query: 226 LLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
           L+      G++  A +L   +   G   ++  +TV+I G  +    D A  L+ KM  +G
Sbjct: 479 LIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDG 538

Query: 286 CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
             PN  +Y  +I+GF++ +  S A   +D +  +  + +L    +L+D  S+
Sbjct: 539 FLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLLDLESQ 590


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 141/504 (27%), Positives = 248/504 (49%), Gaps = 34/504 (6%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKE----TQLPNFLSFNIALCNLCKLNDVSNV 204
           GFT N F  NIV+  L + G V   + +++E    +  P+ +S+N  +  LCK      +
Sbjct: 139 GFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCK---AKKL 195

Query: 205 KDVIGMMVR---KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVL 261
           K+ +G+++     G +PN      L++  CK GR+ EA +LL  M   G    V  +  L
Sbjct: 196 KEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTL 255

Query: 262 IDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH 321
           I GF     LD    L+++M+  G S NVVTY+ L+ G      +  A + L+ +   G 
Sbjct: 256 ISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGI 315

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG----RFS 377
            PD+V +  LID L K G    A+D+ + ++E    P + T+  LLS +C  G     F 
Sbjct: 316 HPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFK 375

Query: 378 LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG--FTPDNYSFVGLLR 435
           +L +++     +AD+V YN L+   C  G  ++A+KL+N+M D      P+ ++F  L+ 
Sbjct: 376 IL-RMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIG 434

Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
           GLC   ++ +A+ +++ +V      N   +  ++   ++AG+  +A++L+++ +   +  
Sbjct: 435 GLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVP 494

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
           +  +Y++ I G  +      A  L+ +M+   + P  + Y  ++ S CKE +++  K L 
Sbjct: 495 NSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLF 554

Query: 556 QDVIDARIELD---YHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM--------W 604
           Q++ +A  E D   ++T I  T     F        ++VEM   GL PD +         
Sbjct: 555 QEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEM---GLRPDALTFSTLINRL 611

Query: 605 RKLGLLSDETMTPVS--LFDGFVP 626
            KLG L DE  + +   +  GF P
Sbjct: 612 SKLGEL-DEAKSALERMVASGFTP 634



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 134/484 (27%), Positives = 224/484 (46%), Gaps = 17/484 (3%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV----LKETQLPNFL 186
           R   YG+    +  M      P+  + + +++      +  LG  V    LK     N  
Sbjct: 86  RSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVF 145

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
             NI L  LC+   V     +I  M RK   P++  +  L+N  CK  ++ EA  LL  M
Sbjct: 146 IMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEM 205

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
              G   +    T L+DG  +  R+D A  L E M + G   +VV Y +LI GF      
Sbjct: 206 EAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNL 265

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
                  D +  +G + ++V ++ L+  L ++G + +A  V + + E  + PD  T+  L
Sbjct: 266 DRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGL 325

Query: 367 LSTVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
           +  +C  GR      LL  +V   E E   V YN LLS  CK G    A K+   M++KG
Sbjct: 326 IDGLCKDGRATHAMDLLNLMVEKGE-EPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKG 384

Query: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT--AIVDRLIEAGRCHK 480
              D  ++  L++GLC   K+DEA+ ++  +  N   +  +V T   ++  L + GR  K
Sbjct: 385 KKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTK 444

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
           A+++ R+ + +    ++V+Y + + G L+ G+ +EA  L+ Q+  +   PN++TY +++ 
Sbjct: 445 AVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILID 504

Query: 541 SFCKERNIKMVKRLLQDVIDARIE---LDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLG 597
            FCK R + + K L  ++    +     DY+T   L   + K  S   A +   EM N  
Sbjct: 505 GFCKMRMLNIAKGLFCEMRTHGLNPALFDYNT---LMASLCKEGSLEQAKSLFQEMGNAN 561

Query: 598 LIPD 601
             PD
Sbjct: 562 CEPD 565



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 132/542 (24%), Positives = 246/542 (45%), Gaps = 24/542 (4%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
           +R +  +V   + ++  + R  G FE + G++ E+ R        ++   +    + +  
Sbjct: 137 KRGFTVNVFIMNIVLKGLCRNGGVFEAM-GLIREMGRKSVSPDIVSYNTLINGLCKAKKL 195

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLS----FNIA 191
              +    EM   G  PN+     +MD L K GR+D  +++L+  +   F +    +   
Sbjct: 196 KEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTL 255

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           +   C   ++   K++   M+ KG   NV  +  L++  C++G+  EA  +L  M   G 
Sbjct: 256 ISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGI 315

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
              V  +T LIDG  +  R   A  L   MV+ G  P+ VTY  L+ G  +  +   AF 
Sbjct: 316 HPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFK 375

Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK--LVPDSYTFCSLLST 369
            L M+  +G   D+V +N L+  L   G  D+AL +++ + + +  L P+ +TF  L+  
Sbjct: 376 ILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGG 435

Query: 370 VCLSGRFS--------LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
           +C  GR +        ++ K  CG     +LV YN LL    KAG   +A++L+  +LD 
Sbjct: 436 LCKEGRLTKAVKIHRKMVKKGSCG-----NLVTYNMLLGGCLKAGKIKEAMELWKQVLDL 490

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN--NPAVNAHVHTAIVDRLIEAGRCH 479
           GF P+++++  L+ G C  R ++ A  ++  +  +  NPA+    +  ++  L + G   
Sbjct: 491 GFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPAL--FDYNTLMASLCKEGSLE 548

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
           +A  LF+         D++S+   I G L+ G  +    L  +M  + + P+A T+  ++
Sbjct: 549 QAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLI 608

Query: 540 LSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLI 599
               K   +   K  L+ ++ +    D      L K +     ++  +N L +M   G +
Sbjct: 609 NRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTV 668

Query: 600 PD 601
            D
Sbjct: 669 LD 670



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/377 (24%), Positives = 177/377 (46%), Gaps = 6/377 (1%)

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
           LP++ + N  +  L +  +      V   M      P+      L+ CF    +    + 
Sbjct: 71  LPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQLGFG 130

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           ++GL++  G +++V    +++ G  R   +  A  L  +M +   SP++V+Y +LI G  
Sbjct: 131 VVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLC 190

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           +AK    A   L  +E+ G  P+ V    L+D L K G  D+A+++ + + +     D  
Sbjct: 191 KAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVV 250

Query: 362 TFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
            + +L+S  C +G      +L   + G  + A++V Y+ L+   C+ G   +A  + N M
Sbjct: 251 LYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAM 310

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
            + G  PD  ++ GL+ GLC   +   A+++   +V      +   +  ++  L + G  
Sbjct: 311 AEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLV 370

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM--KHIAVPPNAYTYR 536
             A ++ R  I +    DVV+Y   ++GL + G+ +EA  L++ M      + PN +T+ 
Sbjct: 371 IDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFN 430

Query: 537 VMLLSFCKE-RNIKMVK 552
           +++   CKE R  K VK
Sbjct: 431 MLIGGLCKEGRLTKAVK 447



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 98/449 (21%), Positives = 188/449 (41%), Gaps = 50/449 (11%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           K++ +  DV  +  +IS      G  +  + +  E+   G      T+   +    R   
Sbjct: 241 KKKGFDADVVLYGTLISGFCN-NGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQ 299

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR----VDLGIKVLKETQLPNFLSFNI 190
           +       + M   G  P+      ++D L K GR    +DL   ++++ + P+ +++N+
Sbjct: 300 WKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNV 359

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKG----------------------------------- 215
            L  LCK   V +   ++ MM+ KG                                   
Sbjct: 360 LLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNE 419

Query: 216 --FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
               PNV  F +L+   CK GR+ +A ++   M+  G+  ++  + +L+ G  +  ++  
Sbjct: 420 NCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKE 479

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  LW++++  G  PN  TY+ LI GF + +M +IA      + + G  P L  +N L+ 
Sbjct: 480 AMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMA 539

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEA 390
            L K GS + A  ++  +      PD  +F +++     +G F  + +L   +  + +  
Sbjct: 540 SLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRP 599

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           D + ++ L++   K G  ++A      M+  GFTPD   +  LL+GL       E IN+ 
Sbjct: 600 DALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLL 659

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
             +      ++  + + I+  L     CH
Sbjct: 660 HQMAAKGTVLDRKIVSTILTCL-----CH 683



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/234 (21%), Positives = 103/234 (44%), Gaps = 4/234 (1%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLN 199
           +M + G   N    N+++    K G++   +++ K+      +PN  +++I +   CK+ 
Sbjct: 451 KMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMR 510

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
            ++  K +   M   G  P +  +  L+   CK G + +A  L   M        + ++ 
Sbjct: 511 MLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFN 570

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
            +IDG  +         L  KMV+ G  P+ +T+++LI    +      A S L+ + + 
Sbjct: 571 TMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVAS 630

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           G  PD + ++ L+  LS  G   + +++   +     V D     ++L+ +C S
Sbjct: 631 GFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHS 684


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 118/448 (26%), Positives = 219/448 (48%), Gaps = 23/448 (5%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
              M R G  PN +  NI++  L   GR++  + V+ + +     PN +++N  +   C+
Sbjct: 140 LSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCR 199

Query: 198 LNDVSNVKDVIGMMVRKG-FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
             ++   + V+ +M  +G   PN+  F  ++N  CK GR+  A ++   M+  G +  V 
Sbjct: 200 AGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVV 259

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
           ++  L+ G+ ++  L  +  ++ +M Q G  P+VVT+TSLI    +A     A + +  +
Sbjct: 260 SYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQM 319

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
              G   + V    LID   K G  DDAL   + + +  + P    + +L++  C  GR 
Sbjct: 320 RERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRM 379

Query: 377 SLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
            L  +L+  +E   V+ D+V Y+ ++S +CK G  + A +L   ML KG  PD  ++  L
Sbjct: 380 DLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSL 439

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           +RGLC  +++++A  +++ ++      +   +T ++D   + G   KA+ L    I +  
Sbjct: 440 IRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGV 499

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL------------- 540
             DVV+Y+V I GL +  RT+EA+ L  ++ H    P+   Y  ++L             
Sbjct: 500 LPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVAL 559

Query: 541 --SFCKERNIKMVKRLLQDVIDARIELD 566
              FC +  +K   ++ Q ++D   +LD
Sbjct: 560 LKGFCMKGLMKEADKVYQSMLDRNWKLD 587



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 126/487 (25%), Positives = 227/487 (46%), Gaps = 27/487 (5%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWR-GEMYGM--VLEAFDEMGRFGFTPNT 154
           GR E   G+VG++   GC   A T+   +  + R GE+ G   V+    E G     PN 
Sbjct: 166 GRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEG--NAKPNL 223

Query: 155 FARNIVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGM 210
              N +++ L K GR++   KV    ++E   P+ +S+N  L   CK+  +     V   
Sbjct: 224 VTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSE 283

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M ++G  P+V  F  L++  CK G + +A  L+  M   G  ++   +T LIDGF +   
Sbjct: 284 MTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGF 343

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           LD A    E+M + G  P+VV Y +LI G+ +     +A   +  +E++   PD+V ++ 
Sbjct: 344 LDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 403

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLE 387
           +I    K+G+ D A  +   +L+  ++PD+ T+ SL+  +C   R +   +L   +  L 
Sbjct: 404 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 463

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
           V+ D   Y  L+   CK G   +A+ L++ M+ KG  PD  ++  L+ GL  + +  EA 
Sbjct: 464 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAH 523

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEA----------GRCHKAI-----QLFRRAIVEK 492
            +   +   +P  +   + A++    +A          G C K +     ++++  +   
Sbjct: 524 RLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRN 583

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVK 552
           + LD   Y++ I G   GG   +A   + QM      PN+ +   ++    +E  +    
Sbjct: 584 WKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEAD 643

Query: 553 RLLQDVI 559
             +QD++
Sbjct: 644 NAIQDLL 650



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 118/449 (26%), Positives = 203/449 (45%), Gaps = 8/449 (1%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+  ++N  L  L   + + + +  +  M+R G  PNV  + IL+   C  GR+ EA  +
Sbjct: 116 PSVPAYNAVLLALSDAS-LPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGV 174

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG-CSPNVVTYTSLIKGFM 301
           +G M   G + +   +  L+  F R   LD A  +   M + G   PN+VT+ S++ G  
Sbjct: 175 VGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLC 234

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           +A     A    D +  EG APD+V +N L+    K+G   ++L V+  + +  LVPD  
Sbjct: 235 KAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVV 294

Query: 362 TFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           TF SL+   C +G       LV  +    +  + V + AL+  FCK GF + A+     M
Sbjct: 295 TFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEM 354

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
              G  P    +  L+ G C   ++D A  + + +       +   ++ I+    + G  
Sbjct: 355 RKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNL 414

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
             A QL ++ + +    D ++Y+  IRGL E  R  +A  L+  M  + V P+ +TY  +
Sbjct: 415 DSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTL 474

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGL 598
           +   CKE N++    L  ++I   +  D  T   L   + K   +  A   L ++ +   
Sbjct: 475 IDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDP 534

Query: 599 IPDEMWRKLGLL---SDETMTPVSLFDGF 624
           +PD +     +L     E  + V+L  GF
Sbjct: 535 VPDNIKYDALMLCCSKAEFKSVVALLKGF 563



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 109/434 (25%), Positives = 198/434 (45%), Gaps = 32/434 (7%)

Query: 48  LAPHIV-HSTLLN--CPSDLIALSFFIWCA-KQRDYFHDVQSFDHMISVVTRLTGRFETV 103
           LAP +V ++TLL+  C    +  S  ++    QR    DV +F  +I    +  G  E  
Sbjct: 254 LAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCK-AGNLEQA 312

Query: 104 RGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDV 163
             +V ++   G  +   TF   +  + +       L A +EM + G  P+    N +++ 
Sbjct: 313 VALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALING 372

Query: 164 LFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN 219
             K+GR+DL  ++++E +     P+ ++++  +   CK+ ++ +   +   M++KG  P+
Sbjct: 373 YCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPD 432

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
              +  L+   C+  R+ +A +L   M+ LG       +T LIDG  +   ++ A  L +
Sbjct: 433 AITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHD 492

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
           +M++ G  P+VVTY+ LI G  ++     A   L  L  E   PD + ++ L+ C SK  
Sbjct: 493 EMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKA- 551

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYN 396
                        E K V       +LL   C+ G      K+   +     + D  VY+
Sbjct: 552 -------------EFKSV------VALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYS 592

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            L+   C+ G   +A+  +  ML  GF+P++ S + L+RGL     + EA N  Q ++  
Sbjct: 593 ILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTC 652

Query: 457 NPAVNAHVHTAIVD 470
            P  +A    A++D
Sbjct: 653 CPLADAEASKALID 666



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/321 (22%), Positives = 153/321 (47%), Gaps = 5/321 (1%)

Query: 285 GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
           G +P+V  Y +++    +A + S A  FL  +   G AP++  +N+L+  L   G  ++A
Sbjct: 113 GYAPSVPAYNAVLLALSDASLPS-ARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEAD----LVVYNALLS 400
           + V   +      P++ T+ +L++  C +G      ++V  +  E +    LV +N++++
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
             CKAG    A K+++ M+ +G  PD  S+  LL G C    + E++ V+  +       
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
           +    T+++    +AG   +A+ L  +       ++ V++T  I G  + G  ++A +  
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKF 580
            +M+   + P+   Y  ++  +CK   + + + L++++   R++ D  T   +     K 
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKV 411

Query: 581 HSSSSAVNQLVEMCNLGLIPD 601
            +  SA     +M   G++PD
Sbjct: 412 GNLDSAFQLNQKMLKKGVLPD 432


>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
 gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
          Length = 699

 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 137/560 (24%), Positives = 248/560 (44%), Gaps = 42/560 (7%)

Query: 52  IVHSTLLN--CPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGE 109
           +VH+TL+   C +  +  +   + A  +D   DV ++  ++  + +  G+F+  +G++ E
Sbjct: 93  VVHTTLMKGLCDAGRVVEALEHFRAMAKDCAPDVMTYTALVHALCK-AGKFDEAQGMLRE 151

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK-IG 168
           +   GC     TF   +                D + +FG     F   ++ DV+ + +G
Sbjct: 152 MVAQGCAPDTVTFSTLI----------------DGLCKFGSEEQAF--RVLEDVIQRGMG 193

Query: 169 RVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLN 228
             D   + + +            LCN  K N V     V+G+++ KGF P V MF +++N
Sbjct: 194 NSDAAFETIIQR-----------LCN--KYNSVELASKVLGVVIAKGFTPTVLMFNLVIN 240

Query: 229 CFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSP 288
            FCK   +  AY+LL +MI  G   +V  +T+LI G  +  R+  A  L EKMV  GCSP
Sbjct: 241 GFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSP 300

Query: 289 NVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVY 348
           NVVTY+++I G  +      A+    ++E     P++V HN+LID L K    ++A  +Y
Sbjct: 301 NVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLY 360

Query: 349 DGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCK 404
             + E    PD  T+ SL+  +C S +    F L   +       A+ V Y+ L   +  
Sbjct: 361 HRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAA 420

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV 464
            G    A ++++ ++DKGF+PD  ++  L+   C   +  E + + + +         + 
Sbjct: 421 LGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNT 480

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM- 523
            +A++  L E     +AIQLF          D + Y + + G+    + ++A  +  Q+ 
Sbjct: 481 LSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVI 540

Query: 524 --KHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFH 581
             +     P++     ++ S C+       K+LL  + +        +  RL   + +  
Sbjct: 541 DKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQ 600

Query: 582 SSSSAVNQLVEMCNLGLIPD 601
               A      M + G  P+
Sbjct: 601 RWDEATQVFEAMVSAGPAPE 620



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 134/581 (23%), Positives = 254/581 (43%), Gaps = 61/581 (10%)

Query: 65  IALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLL 124
           + L FF W A+ R   H+V S +  + ++ RL  R E +      +AR+ C+    T+ +
Sbjct: 6   LVLLFFDW-ARSR-VGHNVFSCNCALDMLCRLNRRQEALALFRNAMARI-CMPNKFTYGI 62

Query: 125 FLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI---KVLKETQ 181
            +R +       + ++  +EM   GF  N      +M  L   GRV   +   + + +  
Sbjct: 63  LIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKDC 122

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAY- 240
            P+ +++   +  LCK       + ++  MV +G  P+   F  L++  CK G   +A+ 
Sbjct: 123 APDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFR 182

Query: 241 -----------------------------------QLLGLMITLGTSLSVNAWTVLIDGF 265
                                              ++LG++I  G + +V  + ++I+GF
Sbjct: 183 VLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGF 242

Query: 266 RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL 325
            + + LD A  L E M++ GC PNV T+T LI G  +A     A   L+ +   G +P++
Sbjct: 243 CKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNV 302

Query: 326 VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCG 385
           V ++ +I+ L K G  DDA +++  +      P+  T   L+  +C + R     +L   
Sbjct: 303 VTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHR 362

Query: 386 LE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN-YSFVGLLRGLCGAR 441
           +       D++ YN+L+   CK+   ++A +L+ T+ + G +  N  ++  L  G     
Sbjct: 363 MRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALG 422

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYT 501
           ++ +A  ++  +V    + +   +T+++    +  R  + ++L      + +P  V + +
Sbjct: 423 RMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLS 482

Query: 502 VAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
             + GL EG  TE A  L+  M       +A  Y +++    +         +L+ VID 
Sbjct: 483 AVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDK 542

Query: 562 RIELDYHTSIRLTKFIFKFHSSSSAVNQLVE-MCNLGLIPD 601
           R                KF+ SSSAV+ LVE +C +G   D
Sbjct: 543 RDR--------------KFNPSSSAVDALVESLCQVGKTDD 569



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 102/440 (23%), Positives = 192/440 (43%), Gaps = 19/440 (4%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG 173
           GCV    TF + +    +    G   +  ++M   G +PN    + V++ L K G+VD  
Sbjct: 262 GCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDA 321

Query: 174 IKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
            ++ +  +     PN ++ NI +  LCK   +   + +   M   G  P++  +  L++ 
Sbjct: 322 YELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDG 381

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNA--WTVLIDGFRRLRRLDMAGYLWEKMVQNGCS 287
            CK  ++ EA+QL   +   G S + NA  ++ L  G+  L R+  A  ++  +V  G S
Sbjct: 382 LCKSFQVDEAFQLFQTIPESGVS-AANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFS 440

Query: 288 PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
           P++ TYTSLI  + +          ++ + S+G  P +   + ++  L +    + A+ +
Sbjct: 441 PDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQL 500

Query: 348 YDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADL---------VVYNAL 398
           +D +       D+  +  ++  +    R S   K +  LE   D             +AL
Sbjct: 501 FDSMAARGCTDDALIYNLVVEGM---ARASKHDKALAVLEQVIDKRDRKFNPSSSAVDAL 557

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           +   C+ G  + A +L + M ++GF     S+  LL GL   ++ DEA  V++ +V   P
Sbjct: 558 VESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGP 617

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
           A        ++  L  A +   A +L +R        D+ +    I G  + GR + A  
Sbjct: 618 APEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARK 677

Query: 519 LYSQMKHIAVPPNAYTYRVM 538
           L  +M    + PN  T+ ++
Sbjct: 678 LLEEMTEAGLEPNDTTHDLL 697



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/229 (22%), Positives = 103/229 (44%), Gaps = 7/229 (3%)

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
           +A  G   +  T    L   + G      ++ FD M   G T +    N+V++ + +  +
Sbjct: 469 MASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASK 528

Query: 170 VDLGIKVLKETQLPNFLSFNIA-------LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
            D  + VL++        FN +       + +LC++    + K ++  M  +GF   V  
Sbjct: 529 HDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSS 588

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           +  LL+   ++ R  EA Q+   M++ G +  ++   V+I       ++D A  L ++M 
Sbjct: 589 YNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMS 648

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           + GC P++ T  +LI G+ ++    +A   L+ +   G  P+   H++L
Sbjct: 649 KLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 697


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 200/398 (50%), Gaps = 5/398 (1%)

Query: 176 VLKETQLPNFLSFNIALCNLCKLN--DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKM 233
           ++K   LP+   FN  L  + K+   D+     ++G M++ G+ P++     LLN +C  
Sbjct: 33  MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHG 92

Query: 234 GRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTY 293
            RI++A  L+  M+ +G       +T LI G     +   A  L ++MVQ GC PN+VTY
Sbjct: 93  KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 152

Query: 294 TSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE 353
             ++ G  +     +AF+ L+ +E+     D+V  N +ID L K    DDAL+++  +  
Sbjct: 153 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 212

Query: 354 LKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQ 410
             + P+  T+ SL+S +C  GR+S   +L+  +   ++  +LV +NAL+  F K G   +
Sbjct: 213 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 272

Query: 411 AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
           A KL++ M+ +   PD +++  L+ G C   ++D+A  +++ +V  +   +   +  ++ 
Sbjct: 273 AEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIK 332

Query: 471 RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
              ++ R     +LFR         D V+YT  I+GL   G  + A  ++ QM    VPP
Sbjct: 333 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 392

Query: 531 NAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
           +  TY ++L   C    ++    +   +  + I+LD +
Sbjct: 393 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 430



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 121/478 (25%), Positives = 219/478 (45%), Gaps = 39/478 (8%)

Query: 85  SFDHMISVVTRLTGRFETV--RGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF 142
            F+ ++S + ++  +F+ V    ++G++ ++G      T    L  Y  G+     +   
Sbjct: 44  EFNKLLSAIAKMK-KFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 102

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVS 202
           D+M   G+ P+T     ++  LF                L N  S  +AL          
Sbjct: 103 DQMVEMGYRPDTITFTTLIHGLF----------------LHNKASEAVAL---------- 136

Query: 203 NVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLI 262
                +  MV++G  PN+  + +++N  CK G I  A+ LL  M        V  +  +I
Sbjct: 137 -----VDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 191

Query: 263 DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL-DMLESEGH 321
           D   + R +D A  L+++M   G  PNVVTY+SLI        +S A   L DM+E + +
Sbjct: 192 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 251

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPK 381
            P+LV  N LID   K G + +A  ++D +++  + PD +T+ SL++  C+  R     +
Sbjct: 252 -PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQ 310

Query: 382 L---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
           +   +   +   DL  YN L+  FCK+       +L+  M  +G   D  ++  L++GL 
Sbjct: 311 MFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 370

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
                D A  V++ +V +    +   ++ ++D L   G+  KA+++F      +  LD+ 
Sbjct: 371 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 430

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
            YT  I G+ + G+ ++ + L+  +    V PN  TY  M+   C +R ++    LL+
Sbjct: 431 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLK 488



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 97/405 (23%), Positives = 179/405 (44%), Gaps = 37/405 (9%)

Query: 204 VKDVIGM---MVRKGFYPNVRMFEILLNCFCKMGR--IAEAYQLLGLMITLGTSLSVNAW 258
           + D IG+   MV+    P++  F  LL+   KM +  +  +  LLG M+ LG   S+   
Sbjct: 23  LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTL 82

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
           + L++G+   +R+  A  L ++MV+ G  P+ +T+T+LI G       S A + +D +  
Sbjct: 83  SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 142

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL 378
            G  P+LV + V+++ L K G  D A                               F+L
Sbjct: 143 RGCQPNLVTYGVVVNGLCKRGDIDLA-------------------------------FNL 171

Query: 379 LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
           L K+    ++EAD+V++N ++   CK    + A+ L+  M  KG  P+  ++  L+  LC
Sbjct: 172 LNKMEAA-KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 230

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
              +  +A  +   ++      N     A++D  ++ G+  +A +L    I      D+ 
Sbjct: 231 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIF 290

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           +Y   I G     R ++A  ++  M      P+  TY  ++  FCK + ++    L +++
Sbjct: 291 TYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM 350

Query: 559 IDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
               +  D  T   L + +F      +A     +M + G+ PD M
Sbjct: 351 SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 395



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 145/306 (47%), Gaps = 7/306 (2%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK---ETQL-PNFLSFNIALC 193
            L  F EM   G  PN    + ++  L   GR     ++L    E ++ PN ++FN  + 
Sbjct: 203 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 262

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
              K       + +   M+++   P++  +  L+N FC   R+ +A Q+   M++     
Sbjct: 263 AFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFP 322

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
            ++ +  LI GF + +R++    L+ +M   G   + VTYT+LI+G         A    
Sbjct: 323 DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 382

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
             + S+G  PD++ +++L+D L   G  + AL+V+D + + ++  D Y + +++  +C +
Sbjct: 383 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 442

Query: 374 GRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           G+      L C L    V+ ++V YN ++S  C      +A  L   M + G  PD+ ++
Sbjct: 443 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTY 502

Query: 431 VGLLRG 436
             L+R 
Sbjct: 503 NTLIRA 508



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/337 (23%), Positives = 150/337 (44%), Gaps = 5/337 (1%)

Query: 270 RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS--IAFSFLDMLESEGHAPDLVF 327
           +LD A  L+  MV++   P++  +  L+    + K F   I+ + L  +   G+ P +V 
Sbjct: 22  KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVT 81

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL- 386
            + L++         DA+ + D ++E+   PD+ TF +L+  + L  + S    LV  + 
Sbjct: 82  LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV 141

Query: 387 --EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
               + +LV Y  +++  CK G  + A  L N M       D   F  ++  LC  R +D
Sbjct: 142 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 201

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
           +A+N+++ +       N   +++++  L   GR   A QL    I +K   ++V++   I
Sbjct: 202 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 261

Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
              ++ G+  EA  L+  M   ++ P+ +TY  ++  FC    +   K++ + ++     
Sbjct: 262 DAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF 321

Query: 565 LDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            D  T   L K   K            EM + GL+ D
Sbjct: 322 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 358



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/230 (22%), Positives = 104/230 (45%), Gaps = 5/230 (2%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDV 207
           P+    N ++    K  RV+ G ++ +E      + + +++   +  L    D  N + V
Sbjct: 322 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 381

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
              MV  G  P++  + ILL+  C  G++ +A ++   M      L +  +T +I+G  +
Sbjct: 382 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 441

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
             ++D    L+  +   G  PNVVTY ++I G    ++   A++ L  ++ +G  PD   
Sbjct: 442 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGT 501

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
           +N LI    + G    + ++   +   + V D+ T   L++ +   GR  
Sbjct: 502 YNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI-GLVANMLHDGRLD 550


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 126/432 (29%), Positives = 219/432 (50%), Gaps = 19/432 (4%)

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
           LP+ +S+N  +  LCK   +    D++  M      PN   + IL++  CK GR+ EA +
Sbjct: 7   LPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMR 66

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           LLG M   G  + V  ++ LI GF     LD    L+++M++ G SPNVV Y+ LI GF 
Sbjct: 67  LLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFC 126

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           +  ++  A + L  +   G  PD+  +  +I  L K G    ALD++D + E    P + 
Sbjct: 127 KKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTV 186

Query: 362 TFCSLLSTVCLSG----RFSLLPKLV-CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYN 416
           T+  L++ +C  G     F +   ++  G  +E  +V YN L+   C  G  ++A+KL++
Sbjct: 187 TYNVLINGLCKEGCIGDAFKIFETMLEKGKRLE--VVSYNTLIMGLCNNGKLDEAMKLFS 244

Query: 417 TMLDKG--FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
           ++L+ G    PD  +F  +++GLC   ++D+A+ +Y  ++      N      ++   I+
Sbjct: 245 SLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIK 304

Query: 475 AGRCHKAIQLFRRAIVEKYPL--DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
           +G   KA++L++R  V K  L     +Y+V I G  +      A  L+S+MK   + P  
Sbjct: 305 SGIIDKAMELWKR--VHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTL 362

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD---YHTSIRLTKFIFKFHSSSSAVNQ 589
           + Y  ++ S CKE +++  +RL Q++ ++  E D   ++  I  T      HS+   +N 
Sbjct: 363 FDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLND 422

Query: 590 LVEMCNLGLIPD 601
           + +M   GL PD
Sbjct: 423 MQQM---GLTPD 431



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 118/501 (23%), Positives = 219/501 (43%), Gaps = 44/501 (8%)

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLND 200
           M R    P+  + N +++ L K  R++  + +L E +     PN  ++ I +  LCK   
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
           V     ++G M RKG   +V ++  L++ FC  G +     L   M+  G S +V  ++ 
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           LI+GF +      A  +   M + G  P+V TYT +I G  +      A    D++  +G
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
             P  V +NVLI+ L K G   DA  +++ +LE     +  ++ +L+  +C +G+     
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAM 240

Query: 381 KLVCGL-----EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG-----FT------ 424
           KL   L      VE D++ +N ++   CK G  ++AV++Y+TM+++G     FT      
Sbjct: 241 KLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIG 300

Query: 425 ------------------------PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
                                   P + ++  ++ G C    ++ A  ++  + ++  + 
Sbjct: 301 EYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSP 360

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
               +  ++  L +     +A +LF+         D +S+ + I G L+ G    A  L 
Sbjct: 361 TLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELL 420

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKF 580
           + M+ + + P+AYTY   +    K   ++  K     +I + I  D H    L K     
Sbjct: 421 NDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLN 480

Query: 581 HSSSSAVNQLVEMCNLGLIPD 601
                 +N L +M ++G+I D
Sbjct: 481 DEIEEVINLLRQMADMGVILD 501



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 115/493 (23%), Positives = 199/493 (40%), Gaps = 12/493 (2%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR E    ++GE+ R G  +    +   +  +            FDEM   G +PN    
Sbjct: 59  GRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVY 118

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           + +++   K G       VL         P+  ++   +  LCK        D+  +M  
Sbjct: 119 SCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTE 178

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           KG  P+   + +L+N  CK G I +A+++   M+  G  L V ++  LI G     +LD 
Sbjct: 179 KGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDE 238

Query: 274 AGYLWEKMVQNG--CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           A  L+  ++++G    P+V+T+ ++I+G  +      A    D +   G   +L   ++L
Sbjct: 239 AMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHIL 298

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA- 390
           I    K G  D A++++  + +L LVP S T+  ++   C     +    L   +++   
Sbjct: 299 IGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGL 358

Query: 391 --DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
              L  YN L++  CK     QA +L+  M +    PD  SF  ++ G   A  I  A  
Sbjct: 359 SPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKE 418

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           +   +       +A+ +++ ++RL + G+  +A   F   I      D   Y   I+G  
Sbjct: 419 LLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFG 478

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
                EE   L  QM  + V  +      +L   C       V  LL +      E    
Sbjct: 479 LNDEIEEVINLLRQMADMGVILDLEITNSILTFLCNSAEHLHVMELLPNF---SSESSGG 535

Query: 569 TSIRLTKFIFKFH 581
           TSI   K + K  
Sbjct: 536 TSISCDKLLMKIQ 548


>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
 gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
          Length = 855

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 130/564 (23%), Positives = 244/564 (43%), Gaps = 67/564 (11%)

Query: 78  DYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGE---- 133
           D F D+Q+++ +++  +R   R +    +   L+  GC   A T+   ++  +  +    
Sbjct: 294 DNFPDIQTYNILVAGFSR-ANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEE 352

Query: 134 ------------MYGMVL-------------EAFDEMGRFGFTPNTFARNIVMDVLFKIG 168
                        Y  V+             E F+++   G +PN  A   V+D L K G
Sbjct: 353 AKAFFDEALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAG 412

Query: 169 RVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFE 224
           R++ G+K  ++      +P   ++ + +  LCK   + +   V   MV+KG  P+   + 
Sbjct: 413 RIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYT 472

Query: 225 ILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN 284
            L++ F K  ++ EA +LL +M+T G   +   +  ++ GF +L  ++ A  +  +M + 
Sbjct: 473 TLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRER 532

Query: 285 GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
           GC P +  +TSL+  ++       A+  L  + + G APD++ +  LID L   G   +A
Sbjct: 533 GCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEA 592

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCK 404
             V+D ++E    PD+ T                                Y  ++  F K
Sbjct: 593 RHVFDSMIEKGCAPDALT--------------------------------YGTIIQNFSK 620

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV 464
            G    A ++   M   G  PD +++  L+ G     ++D+A  VY  +V +    NA  
Sbjct: 621 IGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVT 680

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIV-EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM 523
              ++  L + G+  +A  LF+  +  ++ P  +VSYT+ I GL + GR  EA+  + +M
Sbjct: 681 FNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEM 740

Query: 524 KHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSS 583
               + P  +TY  ++ S  K   I   K+L++D++   +  D      L   +      
Sbjct: 741 IDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMV 800

Query: 584 SSAVNQLVEMCNLGLIPDEMWRKL 607
            +A +   EM   G  P+E+  K+
Sbjct: 801 DTAWDVFQEMMKRGCAPNEVTYKV 824



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/425 (25%), Positives = 202/425 (47%), Gaps = 8/425 (1%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
            GR E       +++   CV    T+ + +    + +M     + F++M + G  P+T  
Sbjct: 411 AGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTIT 470

Query: 157 RNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
              ++D   K  ++D   K+L     +   P  +++   +   CKL+ ++  K+VI  M 
Sbjct: 471 YTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMR 530

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
            +G  P + +F  LL+ +   GR  EAYQ+L  M   G +  V  +T LID      R+ 
Sbjct: 531 ERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVP 590

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A ++++ M++ GC+P+ +TY ++I+ F +      A   L+++   G  PD   +N L+
Sbjct: 591 EARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLM 650

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEV 388
           D   K+   D A  VYD ++   + P++ TF  L+  +   G+    FSL  +++   EV
Sbjct: 651 DGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEV 710

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
              LV Y  L+    KAG  ++A   +  M+D+G  P+ +++  L+  L  A +I EA  
Sbjct: 711 PPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKK 770

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           + + +V      +   ++A++  LI++     A  +F+  +      + V+Y V  RG  
Sbjct: 771 LVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFR 830

Query: 509 EGGRT 513
             GR 
Sbjct: 831 AAGRA 835



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 123/494 (24%), Positives = 211/494 (42%), Gaps = 26/494 (5%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALC 193
            L+   EM   G  P+    NIV++ L K  ++D  I++  E       P  +S+N  + 
Sbjct: 4   ALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVIS 63

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
            L  ++ +         M+  G  P+V  F  L++ FCK G+    + LL   +      
Sbjct: 64  GLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFRP- 122

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
            V  +T +I G+ +   LD    + E+M+  GC P+   Y  LI    +      A+   
Sbjct: 123 DVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELF 182

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           + +   G   D V    LI+ LS  G  D+A ++Y  ++E    P      SL+  +C +
Sbjct: 183 ERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKA 242

Query: 374 GRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           G+     ++   V   +V    V YN+L+  +CK G  +  +KL   M++    PD  ++
Sbjct: 243 GKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTY 302

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             L+ G   A ++D+A+ +++ +       NA  +T I+  L +A R  +A   F  A  
Sbjct: 303 NILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEA-- 360

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
               LDV+SYT  I+GL +  R +EA  L+ ++K     PN   Y  ++    K   I+ 
Sbjct: 361 ----LDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIED 416

Query: 551 VKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLL 610
             +  +D+  +       T   +   + K      A     +M   G +PD         
Sbjct: 417 GLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPD--------- 467

Query: 611 SDETMTPVSLFDGF 624
              T+T  +L DGF
Sbjct: 468 ---TITYTTLIDGF 478



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 84/379 (22%), Positives = 155/379 (40%), Gaps = 50/379 (13%)

Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
           + EA   L  M T G    V    ++++G  + R++D A  L+ +M   GC P +V+Y +
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID--CLS----------------- 336
           +I G         A+ F + +   G  PD++    LI   C +                 
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRF 120

Query: 337 ---------------KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR------ 375
                          K G  D    + + +L    +PD+  +  L+  +C  GR      
Sbjct: 121 RPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYE 180

Query: 376 -FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
            F  + K  C      D V +  L+      G  ++A +LY  M+++G+ P       L+
Sbjct: 181 LFERMRKSGC----LGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLI 236

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI-VEKY 493
             LC A K+DEA  +YQ +V    A +   + +++D   + GR    ++L  + +  + +
Sbjct: 237 FALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNF 296

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
           P D+ +Y + + G     R ++A  L+  +      PNA TY  ++      + ++  K 
Sbjct: 297 P-DIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKA 355

Query: 554 LLQDVIDARIELDYHTSIR 572
              + +D    + Y T I+
Sbjct: 356 FFDEALDV---ISYTTVIK 371


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 118/448 (26%), Positives = 219/448 (48%), Gaps = 23/448 (5%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
              M R G  PN +  NI++  L   GR++  + V+ + +     PN +++N  +   C+
Sbjct: 140 LSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCR 199

Query: 198 LNDVSNVKDVIGMMVRKG-FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
             ++   + V+ +M  +G   PN+  F  ++N  CK GR+  A ++   M+  G +  V 
Sbjct: 200 AGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVV 259

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
           ++  L+ G+ ++  L  +  ++ +M Q G  P+VVT+TSLI    +A     A + +  +
Sbjct: 260 SYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQM 319

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
              G   + V    LID   K G  DDAL   + + +  + P    + +L++  C  GR 
Sbjct: 320 RERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRM 379

Query: 377 SLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
            L  +L+  +E   V+ D+V Y+ ++S +CK G  + A +L   ML KG  PD  ++  L
Sbjct: 380 DLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSL 439

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           +RGLC  +++++A  +++ ++      +   +T ++D   + G   KA+ L    I +  
Sbjct: 440 IRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGV 499

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL------------- 540
             DVV+Y+V I GL +  RT+EA+ L  ++ H    P+   Y  ++L             
Sbjct: 500 LPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVAL 559

Query: 541 --SFCKERNIKMVKRLLQDVIDARIELD 566
              FC +  +K   ++ Q ++D   +LD
Sbjct: 560 LKGFCMKGLMKEADKVYQSMLDRNWKLD 587



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 135/528 (25%), Positives = 241/528 (45%), Gaps = 27/528 (5%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWR-GEMYGM--VLEAFDEMGRFGFTPNT 154
           GR E   G+VG++   GC   A T+   +  + R GE+ G   V+    E G     PN 
Sbjct: 166 GRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNA--KPNL 223

Query: 155 FARNIVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGM 210
              N +++ L K GR++   KV    ++E   P+ +S+N  L   CK+  +     V   
Sbjct: 224 VTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSE 283

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M ++G  P+V  F  L++  CK G + +A  L+  M   G  ++   +T LIDGF +   
Sbjct: 284 MTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGF 343

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           LD A    E+M + G  P+VV Y +LI G+ +     +A   +  +E++   PD+V ++ 
Sbjct: 344 LDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 403

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLE 387
           +I    K+G+ D A  +   +L+  ++PD+ T+ SL+  +C   R +   +L   +  L 
Sbjct: 404 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 463

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
           V+ D   Y  L+   CK G   +A+ L++ M+ KG  PD  ++  L+ GL  + +  EA 
Sbjct: 464 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAH 523

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEA----------GRCHKAI-----QLFRRAIVEK 492
            +   +   +P  +   + A++    +A          G C K +     ++++  +   
Sbjct: 524 RLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRN 583

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVK 552
           + LD   Y++ I G   GG   +A   + QM      PN+ +   ++    +E  +    
Sbjct: 584 WKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEAD 643

Query: 553 RLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
             +QD++      D   S  L     K  +  + ++ L  M   GL+P
Sbjct: 644 NAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLP 691



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 118/449 (26%), Positives = 203/449 (45%), Gaps = 8/449 (1%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+  ++N  L  L   + + + +  +  M+R G  PNV  + IL+   C  GR+ EA  +
Sbjct: 116 PSVPAYNAVLLALSDAS-LPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGV 174

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG-CSPNVVTYTSLIKGFM 301
           +G M   G + +   +  L+  F R   LD A  +   M + G   PN+VT+ S++ G  
Sbjct: 175 VGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLC 234

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           +A     A    D +  EG APD+V +N L+    K+G   ++L V+  + +  LVPD  
Sbjct: 235 KAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVV 294

Query: 362 TFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           TF SL+   C +G       LV  +    +  + V + AL+  FCK GF + A+     M
Sbjct: 295 TFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEM 354

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
              G  P    +  L+ G C   ++D A  + + +       +   ++ I+    + G  
Sbjct: 355 RKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNL 414

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
             A QL ++ + +    D ++Y+  IRGL E  R  +A  L+  M  + V P+ +TY  +
Sbjct: 415 DSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTL 474

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGL 598
           +   CKE N++    L  ++I   +  D  T   L   + K   +  A   L ++ +   
Sbjct: 475 IDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDP 534

Query: 599 IPDEMWRKLGLL---SDETMTPVSLFDGF 624
           +PD +     +L     E  + V+L  GF
Sbjct: 535 VPDNIKYDALMLCCSKAEFKSVVALLKGF 563



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 77/348 (22%), Positives = 161/348 (46%), Gaps = 5/348 (1%)

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  LI  +  L R  +A          G +P+V  Y +++    +A + S A  FL  + 
Sbjct: 86  FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLALSDASLPS-ARRFLSSML 144

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G AP++  +N+L+  L   G  ++A+ V   +      P++ T+ +L++  C +G   
Sbjct: 145 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 204

Query: 378 LLPKLVCGLEVEAD----LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
              ++V  +  E +    LV +N++++  CKAG    A K+++ M+ +G  PD  S+  L
Sbjct: 205 GAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTL 264

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           L G C    + E++ V+  +       +    T+++    +AG   +A+ L  +      
Sbjct: 265 LSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGL 324

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
            ++ V++T  I G  + G  ++A +   +M+   + P+   Y  ++  +CK   + + + 
Sbjct: 325 RMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARE 384

Query: 554 LLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           L++++   R++ D  T   +     K  +  SA     +M   G++PD
Sbjct: 385 LIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPD 432



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/298 (21%), Positives = 129/298 (43%), Gaps = 20/298 (6%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV ++  +IS   ++ G  ++   +  ++ + G +  A T+   +R     +      E 
Sbjct: 397 DVVTYSTIISGYCKV-GNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACEL 455

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCK 197
           F+ M + G  P+ F    ++D   K G V+  +    +++++  LP+ +++++ +  L K
Sbjct: 456 FENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSK 515

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC---------------FCKMGRIAEAYQL 242
                    ++  +  +   P+   ++ L+ C               FC  G + EA ++
Sbjct: 516 SARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKV 575

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
              M+     L  + +++LI G  R   +  A    ++M+++G SPN  +  SL++G  E
Sbjct: 576 YQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFE 635

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
             M   A + +  L +     D      LID   K G+ D  +DV  G+    L+P S
Sbjct: 636 EGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLPSS 693


>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
 gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
          Length = 789

 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 155/607 (25%), Positives = 259/607 (42%), Gaps = 70/607 (11%)

Query: 48  LAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIV 107
           L+P IV S + N P+  +   FFIW A     F   +S D +  ++    G  E     +
Sbjct: 57  LSPKIVTSIIQNPPNPQLGFRFFIW-ASNFKRFRAWESCDLITDLLINQNG-LELYCQTL 114

Query: 108 GELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKI 167
             L   G  +    F + +++Y +  +    +E F  M  F  TP+ +  N+++DVL + 
Sbjct: 115 EALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQK 174

Query: 168 GRVDLGIKV----LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV--- 220
             + L + V    +K   LPN  +F+I +  LCK  +V +   +   M ++G  P+    
Sbjct: 175 NFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTY 234

Query: 221 -----------------RMFE---------------ILLNCFCKMGRIAEAYQLLGLMIT 248
                            R+F+                LLN FC + R+ EA+ LL L   
Sbjct: 235 CVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEK 294

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
            G  L V  ++ LI G  R +R +    L+ KM+++   P+V  YT ++KG  EA     
Sbjct: 295 DGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRD 354

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A   L+ +   G  PD V +NVLI     MG   +A  +   +      P+  T+  L+S
Sbjct: 355 ALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILIS 414

Query: 369 TVCLSGR-------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
            +C +G        F+ + KL C        V +N+L+   CK G   +A  L+  M + 
Sbjct: 415 GMCRNGLTRDAQEIFNEMEKLGC----YPSAVTFNSLIDGLCKTGQLEKAHLLFYKM-EI 469

Query: 422 GFTP--------------DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTA 467
           G  P              D+ S   ++  LC +  I +A  +   +  +  A   + +  
Sbjct: 470 GRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNI 529

Query: 468 IVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIA 527
           +V+   + G  + A +LFR    +    D V+Y   I GLL   R E+AY ++ QM+   
Sbjct: 530 LVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNG 589

Query: 528 VPPNAYTYRVMLLSFCKERNIKMVKRL-LQDVIDARIELDYHTSIRLTKFIFKFHSSSSA 586
             P+A  YR M+   C+   +     L L+ + + R + D   +I+  +  F+      A
Sbjct: 590 CTPDAAVYRTMMTWMCRRMELPRAFSLWLKYLRNIRSQED--EAIKAIEGYFEKQEVEKA 647

Query: 587 VNQLVEM 593
           V  L+EM
Sbjct: 648 VRGLLEM 654



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 92/401 (22%), Positives = 181/401 (45%), Gaps = 13/401 (3%)

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           F +L+  + KMG   +A +  G M     +  V  + +++D   +   L +A  ++ +M+
Sbjct: 129 FFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMM 188

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
           +  C PNV T++ LI G  ++     A    D +   G  PD   + V+I  L +    D
Sbjct: 189 KLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVD 248

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNAL 398
           DA  ++D + +  + PD  T  +LL+  C+  R    FSLL +L        D+  Y+ L
Sbjct: 249 DAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLL-RLFEKDGYVLDVRGYSCL 307

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           +    +A        LY  M++    PD Y +  +++GL  A K+ +A+ +   +  +  
Sbjct: 308 IRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGV 367

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
             +   +  ++    + G   +A  L           +V +Y++ I G+   G T +A  
Sbjct: 368 VPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQE 427

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS--IRLTKF 576
           ++++M+ +   P+A T+  ++   CK   ++    L       ++E+  + S  +RL++ 
Sbjct: 428 IFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFY-----KMEIGRNPSLFLRLSQG 482

Query: 577 IFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTP 617
                 S+S    + ++C+ GLI  + +R L  L+D    P
Sbjct: 483 PSHVLDSASLQKMVEQLCDSGLI-HKAYRILMQLADSGDAP 522



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 95/435 (21%), Positives = 175/435 (40%), Gaps = 51/435 (11%)

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLID-------------- 263
           P+V  + ++L+   +   +  A  +   M+ L    +V  +++LID              
Sbjct: 159 PDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHL 218

Query: 264 ---------------------GFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
                                G  R +R+D A  L++KM  +G  P+ VT  +L+ GF  
Sbjct: 219 FDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCM 278

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
                 AFS L + E +G+  D+  ++ LI  L +   Y+D   +Y  ++E  + PD Y 
Sbjct: 279 LDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYL 338

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
           +  ++  +  +G+     +L+  +    V  D V YN L+  FC  G  ++A  L   + 
Sbjct: 339 YTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEIS 398

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
                P+  ++  L+ G+C      +A  ++  +       +A    +++D L + G+  
Sbjct: 399 RHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLE 458

Query: 480 KAIQLFRRAIVEKYP-------------LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
           KA  LF +  + + P             LD  S    +  L + G   +AY +  Q+   
Sbjct: 459 KAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADS 518

Query: 527 AVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSA 586
              P  YTY +++  FCK  N     +L +++    +  D  T   L   + +F     A
Sbjct: 519 GDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDA 578

Query: 587 VNQLVEMCNLGLIPD 601
                +M   G  PD
Sbjct: 579 YKVFDQMEKNGCTPD 593



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 102/485 (21%), Positives = 205/485 (42%), Gaps = 73/485 (15%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG 173
           G V+  + +   +R  +R + Y  V   + +M      P+ +   I+M  L + G+V   
Sbjct: 296 GYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDA 355

Query: 174 IKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
           +++L E      +P+ + +N+ +   C +  +S  + +   + R   +PNV+ + IL++ 
Sbjct: 356 LELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISG 415

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW----------- 278
            C+ G   +A ++   M  LG   S   +  LIDG  +  +L+ A  L+           
Sbjct: 416 MCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSL 475

Query: 279 -----------------EKMVQNGC--------------------SPNVVTYTSLIKGFM 301
                            +KMV+  C                    +P + TY  L+ GF 
Sbjct: 476 FLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFC 535

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           +   F+ A+     ++ +G +PD V +  LI+ L +    +DA  V+D + +    PD+ 
Sbjct: 536 KLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAA 595

Query: 362 TFCSLLSTVC----LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
            + ++++ +C    L   FSL  K +  +  + D  +  A+  YF K     +  K    
Sbjct: 596 VYRTMMTWMCRRMELPRAFSLWLKYLRNIRSQEDEAI-KAIEGYFEK----QEVEKAVRG 650

Query: 418 MLDKGFTPDNYS---FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
           +L+  F  +++    +   L GLC  R++ EA+ ++  +      +       ++  L++
Sbjct: 651 LLEMDFKLNDFDLGPYAIWLIGLCQTRRVGEALKIFLILEEYKVVITPPCCVKLIYFLLK 710

Query: 475 AGRCHKAIQLFRRAIVEKYPL------DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAV 528
            G   +AI +F   I + Y L       +++  V  +G  E G+    Y+L  +MK +  
Sbjct: 711 EGDLDRAIDVFLYTIEKGYLLRRRVANRILTKLVRRKG--EMGKDRAIYLL-CRMKSVGY 767

Query: 529 PPNAY 533
             +A+
Sbjct: 768 DLDAH 772


>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
 gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
          Length = 561

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/447 (26%), Positives = 204/447 (45%), Gaps = 15/447 (3%)

Query: 126 LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ---- 181
           +R   +   +G  L  F  +     TP+    NI++D L K GRV+   ++ +       
Sbjct: 72  IRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQ 131

Query: 182 -LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAY 240
            LPN +++   +  LCK   +    +++ +M   G  PNV  + +L+   CK GR  + +
Sbjct: 132 CLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGF 191

Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
            LL  M   G    V  +  L++G  + RRLD A  L + M+++GC P VVTY SL++ F
Sbjct: 192 TLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELF 251

Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
             +K    AF  + ++   G  PD++ +N +I  L +    DDA  +   ++  + VPD 
Sbjct: 252 CRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDV 311

Query: 361 YTFCSLLSTVCLSGRFSLLPKLVCGLEV---------EADLVVYNALLSYFCKAGFPNQA 411
            T+ +++  +C   R     KL    E+           +   Y  ++   C+A    QA
Sbjct: 312 ITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQA 371

Query: 412 VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
           + L   M+D    PD  SF  ++  LC +  +D A  ++  +       N   + A++D 
Sbjct: 372 LALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDG 431

Query: 472 LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
           L + G   KA+++F   +VE +   V +Y   + GL   GR EEA  +   M H    P+
Sbjct: 432 LSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPD 490

Query: 532 AYTYRVMLLSFCKERNIKMVKRLLQDV 558
             +Y  ++   C+   ++    L Q V
Sbjct: 491 GASYGALIRGLCRVSCVEEAYELFQAV 517



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 113/472 (23%), Positives = 225/472 (47%), Gaps = 17/472 (3%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGEL-ARVGCVIKAQTFLL 124
           AL +F   A  +    D+ +F+ ++  + + +GR E    I   +     C+    T+  
Sbjct: 84  ALGYFKTVAGTK-CTPDIITFNILVDALVK-SGRVEEAFQIFESMHTSSQCLPNVVTYTT 141

Query: 125 FLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ--- 181
            +    +       +E  D M   G  PN    +++++ L K GR D G  +L+E     
Sbjct: 142 VINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRG 201

Query: 182 -LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAY 240
             P+ + +N  L  LCK   +    +++ +M+R G YP V  +  L+  FC+  ++  A+
Sbjct: 202 FQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAF 261

Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
           +L+ +M   G    V  +  +I G  R  RLD A  L ++MV   C P+V+TY+++I G 
Sbjct: 262 RLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGL 321

Query: 301 -----MEAK-MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
                ++A      A   L+M++  G  P+   + V+I+ L +      AL +   +++ 
Sbjct: 322 CKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDS 381

Query: 355 KLVPDSYTFCSLLSTVCLSGRFSLLPK---LVCGLEVEADLVVYNALLSYFCKAGFPNQA 411
           ++VPD  +F  ++ ++C S       K   ++   E + + V Y AL+    K G  ++A
Sbjct: 382 EVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKA 441

Query: 412 VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
           V+++  M++  F P   ++  +L GLCG  +I+EA+ + +G++      +   + A++  
Sbjct: 442 VRVFELMVES-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRG 500

Query: 472 LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM 523
           L       +A +LF+    + + ++V  Y V +  L +  R  +A+ + +++
Sbjct: 501 LCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKL 552



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 104/441 (23%), Positives = 197/441 (44%), Gaps = 48/441 (10%)

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQ-LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
           N  +++L + G+    +++ +E + +PN  ++   +  LCK   +    +++  M  +G 
Sbjct: 2   NCALNLLVRAGQHGQAVQLFREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGI 61

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
            P V +   ++   CK GR  +A      +     +  +  + +L+D   +  R++ A  
Sbjct: 62  PPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQ 121

Query: 277 LWEKM-VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
           ++E M   + C PNVVTYT++I G  +      A   LD++   G  P+++ ++VL++ L
Sbjct: 122 IFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGL 181

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEAD---- 391
            K G  D    +   +      PD   + +LL+ +C S R     +LV  L + +     
Sbjct: 182 CKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELV-QLMIRSGCYPT 240

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
           +V YN+L+  FC++   ++A +L   M ++G  PD  ++  ++ GLC   ++D+A  + +
Sbjct: 241 VVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLK 300

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
            +V                    A RC                 DV++Y+  I GL +  
Sbjct: 301 QMV--------------------AARCVP---------------DVITYSTIIDGLCKDW 325

Query: 512 RT------EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
           R       E A  +   MK    PPNA TY V++   C+ R  +    LL+ +ID+ +  
Sbjct: 326 RVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVP 385

Query: 566 DYHTSIRLTKFIFKFHSSSSA 586
           D  +   +   + K H   +A
Sbjct: 386 DLSSFSMVIGSLCKSHDLDAA 406


>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
 gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
          Length = 561

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/438 (26%), Positives = 201/438 (45%), Gaps = 15/438 (3%)

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ-----LPNFLSFN 189
           +G  L  F  +     TP+    NI++D L K GRV+   ++ +        LPN +++ 
Sbjct: 81  FGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYT 140

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
             +  LCK   +    +++ +M   G  PNV  + +L+   CK GR  + + LL  M   
Sbjct: 141 TVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRR 200

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           G    V  +  L++G  + RRLD A  L + M+++GC P VVTY SL++ F  +K    A
Sbjct: 201 GFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRA 260

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
           F  + ++   G  PD++ +N +I  L +    DDA  +   ++  + VPD  T+ +++  
Sbjct: 261 FRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDG 320

Query: 370 VCLSGRFSLLPKLVCGLEV---------EADLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
           +C   R     KL    E+           +   Y  ++   C+A    QA+ L   M+D
Sbjct: 321 LCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMID 380

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
               PD  SF  ++  LC +  +D A  ++  +       N   + A++D L + G   K
Sbjct: 381 SEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDK 440

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
           A+++F   +VE +   V +Y   + GL   GR EEA  +   M H    P+  +Y  ++ 
Sbjct: 441 AVRVF-ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIR 499

Query: 541 SFCKERNIKMVKRLLQDV 558
             C+   ++    L Q V
Sbjct: 500 GLCRVSCVEEAYELFQAV 517



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 113/472 (23%), Positives = 225/472 (47%), Gaps = 17/472 (3%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGEL-ARVGCVIKAQTFLL 124
           AL +F   A  +    D+ +F+ ++  + + +GR E    I   +     C+    T+  
Sbjct: 84  ALGYFKTVAGTK-CTPDIITFNILVDALVK-SGRVEEAFQIFESMHTSSQCLPNVVTYTT 141

Query: 125 FLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ--- 181
            +    +       +E  D M   G  PN    +++++ L K GR D G  +L+E     
Sbjct: 142 VINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRG 201

Query: 182 -LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAY 240
             P+ + +N  L  LCK   +    +++ +M+R G YP V  +  L+  FC+  ++  A+
Sbjct: 202 FQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAF 261

Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
           +L+ +M   G    V  +  +I G  R  RLD A  L ++MV   C P+V+TY+++I G 
Sbjct: 262 RLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGL 321

Query: 301 -----MEAK-MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
                ++A      A   L+M++  G  P+   + V+I+ L +      AL +   +++ 
Sbjct: 322 CKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDS 381

Query: 355 KLVPDSYTFCSLLSTVCLSGRFSLLPK---LVCGLEVEADLVVYNALLSYFCKAGFPNQA 411
           ++VPD  +F  ++ ++C S       K   ++   E + + V Y AL+    K G  ++A
Sbjct: 382 EVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKA 441

Query: 412 VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
           V+++  M++  F P   ++  +L GLCG  +I+EA+ + +G++      +   + A++  
Sbjct: 442 VRVFELMVES-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRG 500

Query: 472 LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM 523
           L       +A +LF+    + + ++V  Y V +  L +  R  +A+ + +++
Sbjct: 501 LCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKL 552



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 104/441 (23%), Positives = 197/441 (44%), Gaps = 48/441 (10%)

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQ-LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
           N  +++L + G+    +++ +E + +PN  ++   +  LCK   +    +++  M  +G 
Sbjct: 2   NCALNLLVRAGQHGQAVQLFREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGI 61

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
            P V +   ++   CK GR  +A      +     +  +  + +L+D   +  R++ A  
Sbjct: 62  PPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQ 121

Query: 277 LWEKM-VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
           ++E M   + C PNVVTYT++I G  +      A   LD++   G  P+++ ++VL++ L
Sbjct: 122 IFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGL 181

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEAD---- 391
            K G  D    +   +      PD   + +LL+ +C S R     +LV  L + +     
Sbjct: 182 CKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELV-QLMIRSGCYPT 240

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
           +V YN+L+  FC++   ++A +L   M ++G  PD  ++  ++ GLC   ++D+A  + +
Sbjct: 241 VVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLK 300

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
            +V                    A RC                 DV++Y+  I GL +  
Sbjct: 301 QMV--------------------AARCVP---------------DVITYSTIIDGLCKDW 325

Query: 512 RT------EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
           R       E A  +   MK    PPNA TY V++   C+ R  +    LL+ +ID+ +  
Sbjct: 326 RVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVP 385

Query: 566 DYHTSIRLTKFIFKFHSSSSA 586
           D  +   +   + K H   +A
Sbjct: 386 DLSSFSMVIGSLCKSHDLDAA 406


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 219/445 (49%), Gaps = 23/445 (5%)

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLND 200
           M R G  PN +  NI++  L   GR++  + V+ + +     PN +++N  +   C+  +
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 201 VSNVKDVIGMMVRKG-FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
           +   + V+ +M  +G   PN+  F  ++N  CK GR+  A ++   M+  G +  V ++ 
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
            L+ G+ ++  L  +  ++ +M Q G  P+VVT+TSLI    +A     A + +  +   
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
           G   + V    LID   K G  DDAL   + + +  + P    + +L++  C  GR  L 
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240

Query: 380 PKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
            +L+  +E   V+ D+V Y+ ++S +CK G  + A +L   ML KG  PD  ++  L+RG
Sbjct: 241 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 300

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
           LC  +++++A  +++ ++      +   +T ++D   + G   KA+ L    I +    D
Sbjct: 301 LCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPD 360

Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL---------------S 541
           VV+Y+V I GL +  RT+EA+ L  ++ H    P+   Y  ++L                
Sbjct: 361 VVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKG 420

Query: 542 FCKERNIKMVKRLLQDVIDARIELD 566
           FC +  +K   ++ Q ++D   +LD
Sbjct: 421 FCMKGLMKEADKVYQSMLDRNWKLD 445



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 135/528 (25%), Positives = 241/528 (45%), Gaps = 27/528 (5%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWR-GEMYGM--VLEAFDEMGRFGFTPNT 154
           GR E   G+VG++   GC   A T+   +  + R GE+ G   V+    E G     PN 
Sbjct: 24  GRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNA--KPNL 81

Query: 155 FARNIVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGM 210
              N +++ L K GR++   KV    ++E   P+ +S+N  L   CK+  +     V   
Sbjct: 82  VTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSE 141

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M ++G  P+V  F  L++  CK G + +A  L+  M   G  ++   +T LIDGF +   
Sbjct: 142 MTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGF 201

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           LD A    E+M + G  P+VV Y +LI G+ +     +A   +  +E++   PD+V ++ 
Sbjct: 202 LDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 261

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLE 387
           +I    K+G+ D A  +   +L+  ++PD+ T+ SL+  +C   R +   +L   +  L 
Sbjct: 262 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 321

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
           V+ D   Y  L+   CK G   +A+ L++ M+ KG  PD  ++  L+ GL  + +  EA 
Sbjct: 322 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAH 381

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEA----------GRCHKAI-----QLFRRAIVEK 492
            +   +   +P  +   + A++    +A          G C K +     ++++  +   
Sbjct: 382 RLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRN 441

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVK 552
           + LD   Y++ I G   GG   +A   + QM      PN+ +   ++    +E  +    
Sbjct: 442 WKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEAD 501

Query: 553 RLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
             +QD++      D   S  L     K  +  + ++ L  M   GL+P
Sbjct: 502 NAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLP 549



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/421 (27%), Positives = 191/421 (45%), Gaps = 7/421 (1%)

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           MVR G  PNV  + IL+   C  GR+ EA  ++G M   G + +   +  L+  F R   
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 271 LDMAGYLWEKMVQNG-CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHN 329
           LD A  +   M + G   PN+VT+ S++ G  +A     A    D +  EG APD+V +N
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE-- 387
            L+    K+G   ++L V+  + +  LVPD  TF SL+   C +G       LV  +   
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 388 -VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
            +  + V + AL+  FCK GF + A+     M   G  P    +  L+ G C   ++D A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
             + + +       +   ++ I+    + G    A QL ++ + +    D ++Y+  IRG
Sbjct: 241 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 300

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           L E  R  +A  L+  M  + V P+ +TY  ++   CKE N++    L  ++I   +  D
Sbjct: 301 LCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPD 360

Query: 567 YHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLL---SDETMTPVSLFDG 623
             T   L   + K   +  A   L ++ +   +PD +     +L     E  + V+L  G
Sbjct: 361 VVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKG 420

Query: 624 F 624
           F
Sbjct: 421 F 421



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/298 (21%), Positives = 129/298 (43%), Gaps = 20/298 (6%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV ++  +IS   ++ G  ++   +  ++ + G +  A T+   +R     +      E 
Sbjct: 255 DVVTYSTIISGYCKV-GNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACEL 313

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCK 197
           F+ M + G  P+ F    ++D   K G V+  +    +++++  LP+ +++++ +  L K
Sbjct: 314 FENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSK 373

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC---------------FCKMGRIAEAYQL 242
                    ++  +  +   P+   ++ L+ C               FC  G + EA ++
Sbjct: 374 SARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKV 433

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
              M+     L  + +++LI G  R   +  A    ++M+++G SPN  +  SL++G  E
Sbjct: 434 YQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFE 493

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
             M   A + +  L +     D      LID   K G+ D  +DV  G+    L+P S
Sbjct: 494 EGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLPSS 551


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 126/512 (24%), Positives = 242/512 (47%), Gaps = 46/512 (8%)

Query: 68  SFFIWCAKQRDYF---HDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLL 124
           S  +    Q D F   H+V S + +I+ + RL      +  ++G++ ++G    A TF  
Sbjct: 109 STVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAI-SVLGKMFKLGIQPDAITFNT 167

Query: 125 FLRIYWRGEMYGMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ 181
            +       + G + EA   F+EM R G  P+  + + V++ L K G   + +++L++ +
Sbjct: 168 LINGRC---IEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKME 224

Query: 182 ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIA 237
                PN +++   + +LCK   V++  D++  MV +G  P+V  +  +L+ FC +G + 
Sbjct: 225 EKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLN 284

Query: 238 EAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLI 297
           EA  L   M+      +   +T+L+DG  +   +  A  ++E M + G  PN  TY +L+
Sbjct: 285 EATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALM 344

Query: 298 KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
            G+        A   LD++  +G AP +  +N+LI+   K    D+A  +   + E +L 
Sbjct: 345 DGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELT 404

Query: 358 PDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
           PD+                                V Y+ L+   C+ G P +A+ L+  
Sbjct: 405 PDT--------------------------------VTYSTLMQGLCQVGRPQEALNLFKE 432

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           M   G  PD  ++  LL GLC    +DEA+ + + +  +    +  ++  +++ +  AG+
Sbjct: 433 MCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGK 492

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
              A +LF +   +     + +YT+ I+GLL+ G ++EAY L+ +M+     PN+ +Y V
Sbjct: 493 LEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNV 552

Query: 538 MLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
           ++  F + ++     RL+ +++  R   D  T
Sbjct: 553 IIQGFLQNQDSSTAIRLIDEMVGKRFSADSST 584



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/395 (26%), Positives = 192/395 (48%), Gaps = 3/395 (0%)

Query: 175 KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
           ++L+    P+ + F   L ++ K    S V  +   M   G   NV    IL+NC C++ 
Sbjct: 82  RMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLN 141

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
            +  A  +LG M  LG       +  LI+G      +  A  L+ +MV+ G  P+V++Y+
Sbjct: 142 HVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYS 201

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
           ++I G  ++   S+A   L  +E +G  P+LV +  +ID L K    +DA+D+   +++ 
Sbjct: 202 TVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDR 261

Query: 355 KLVPDSYTFCSLLSTVCLSGRF---SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQA 411
            + PD  T+ ++L   C  G     ++L   + G  V  + V +  L+   CK G  ++A
Sbjct: 262 GIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEA 321

Query: 412 VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
             ++  M  KG  P+ Y++  L+ G C   ++DEA  V   +V    A   H +  +++ 
Sbjct: 322 RCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILING 381

Query: 472 LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
             +  R  +A  L      ++   D V+Y+  ++GL + GR +EA  L+ +M    + P+
Sbjct: 382 YCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPD 441

Query: 532 AYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
             TY  +L   CK  ++    +LL+ + +++IE D
Sbjct: 442 LMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPD 476



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 112/452 (24%), Positives = 209/452 (46%), Gaps = 13/452 (2%)

Query: 184 NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
           N  S NI +  LC+LN V     V+G M + G  P+   F  L+N  C  G I EA  L 
Sbjct: 126 NVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLF 185

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
             M+  G    V +++ +I+G  +     MA  L  KM + GC PN+V YT++I    + 
Sbjct: 186 NEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKD 245

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
            + + A   L  +   G  PD+V ++ ++     +G  ++A  +++ ++   ++P++ TF
Sbjct: 246 TLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTF 305

Query: 364 CSLLSTVCLSGRFSLLPKLVCGLE------VEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
             L+  +C  G   ++ +  C  E       E +   YNAL+  +C     ++A K+ + 
Sbjct: 306 TILVDGLCKEG---MVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDI 362

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           M+DKG  P  +S+  L+ G C  R++DEA ++   +       +   ++ ++  L + GR
Sbjct: 363 MVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGR 422

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
             +A+ LF+         D+++Y+  + GL + G  +EA  L   M+   + P+   Y +
Sbjct: 423 PQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNI 482

Query: 538 MLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLG 597
           ++        +++ K L   +    I+    T   + K + K   S  A     +M + G
Sbjct: 483 LIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDG 542

Query: 598 LIPDEMWRKL---GLLSDE-TMTPVSLFDGFV 625
            +P+     +   G L ++ + T + L D  V
Sbjct: 543 FLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMV 574



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 91/402 (22%), Positives = 191/402 (47%), Gaps = 8/402 (1%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
           +R +  DV S+  +I+ + + +G       ++ ++   GC      +   +    +  + 
Sbjct: 190 RRGHQPDVISYSTVINGLCK-SGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLV 248

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE----TQLPNFLSFNIA 191
              ++   EM   G  P+    + ++     +G ++    +  E      +PN ++F I 
Sbjct: 249 NDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTIL 308

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           +  LCK   VS  + V   M +KG  PN   +  L++ +C   ++ EA ++L +M+  G 
Sbjct: 309 VDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGC 368

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
           +  V+++ +LI+G+ + RRLD A  L  +M +   +P+ VTY++L++G  +      A +
Sbjct: 369 APVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALN 428

Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
               + S G  PDL+ ++ L+D L K G  D+AL +   + E K+ PD   +  L+  + 
Sbjct: 429 LFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMF 488

Query: 372 LSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
           ++G+  +  +L   L    ++  +  Y  ++    K G  ++A +L+  M D GF P++ 
Sbjct: 489 IAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSC 548

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
           S+  +++G    +    AI +   +V    + ++     ++D
Sbjct: 549 SYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLLD 590



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/322 (24%), Positives = 145/322 (45%), Gaps = 3/322 (0%)

Query: 285 GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
           G + NV +   LI           A S L  +   G  PD +  N LI+     G   +A
Sbjct: 122 GVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEA 181

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSY 401
           + +++ ++     PD  ++ ++++ +C SG  S+  +L+  +E    + +LV Y  ++  
Sbjct: 182 VGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDS 241

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVN 461
            CK    N A+ L + M+D+G  PD  ++  +L G C    ++EA  ++  +V  N   N
Sbjct: 242 LCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPN 301

Query: 462 AHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYS 521
               T +VD L + G   +A  +F     +    +  +Y   + G     + +EA  +  
Sbjct: 302 TVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLD 361

Query: 522 QMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFH 581
            M      P  ++Y +++  +CK R +   K LL ++ +  +  D  T   L + + +  
Sbjct: 362 IMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVG 421

Query: 582 SSSSAVNQLVEMCNLGLIPDEM 603
               A+N   EMC+ GL+PD M
Sbjct: 422 RPQEALNLFKEMCSSGLLPDLM 443



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 51/246 (20%), Positives = 107/246 (43%), Gaps = 4/246 (1%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           L  + +  + ++  +   GC     ++ + +  Y +            EM     TP+T 
Sbjct: 349 LNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTV 408

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKET----QLPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
             + +M  L ++GR    + + KE      LP+ ++++  L  LCK   +     ++  M
Sbjct: 409 TYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSM 468

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
                 P++ ++ IL+      G++  A +L   +   G   ++  +T++I G  +    
Sbjct: 469 QESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLS 528

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           D A  L+ KM  +G  PN  +Y  +I+GF++ +  S A   +D +  +  + D     +L
Sbjct: 529 DEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQML 588

Query: 332 IDCLSK 337
           +D  S+
Sbjct: 589 LDLESR 594


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 129/519 (24%), Positives = 224/519 (43%), Gaps = 58/519 (11%)

Query: 57  LLNCPSDLIALSFFI--WCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVG 114
           L N   D+  L+  I  +C    D+FH   S                    ++G + ++G
Sbjct: 3   LSNIRPDVYTLTILINCFCHSNHDHFHFAFS--------------------VLGNMFKLG 42

Query: 115 CVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI 174
                 TF   L            ++ FDEM + G+ P+    + +++ L K+G   + I
Sbjct: 43  LQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAI 102

Query: 175 KVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCF 230
           ++LK+ +     PN + ++  + +LCK   ++   + +  MV +G  PNV  +  +L+ F
Sbjct: 103 QLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGF 162

Query: 231 CKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNV 290
           C +GR  EA  L   M+          + +L+DG  +   +  A  ++E M++ G  PNV
Sbjct: 163 CNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNV 222

Query: 291 VTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDG 350
            TY +L+ G+        A    +++  +G AP +  +N+LI    K G  D+A  +   
Sbjct: 223 NTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAE 282

Query: 351 LLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQ 410
           +    L PD+                                V Y+ L+  FC+ G P  
Sbjct: 283 MSHKALTPDT--------------------------------VTYSTLMKGFCQDGRPQD 310

Query: 411 AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
           A KL   M   G  PD  ++  +L GLC    +DEA  + + +  +    N  ++T ++ 
Sbjct: 311 AQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQ 370

Query: 471 RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
            +   G+   A +LF    V+    DVV+YTV I GLL+GG + EA  L+  M      P
Sbjct: 371 GMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLP 430

Query: 531 NAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
           N+ TY V++  F +  +     RL+++++      D  T
Sbjct: 431 NSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSST 469



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 101/403 (25%), Positives = 196/403 (48%), Gaps = 13/403 (3%)

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
           V+G M + G  PN   F  LLN      +I +A +L   M+ +G    V  ++ +I+G  
Sbjct: 34  VLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLC 93

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
           ++    MA  L +KM + GC PNVV Y+++I    + K+ + A  FL  + + G +P++V
Sbjct: 94  KMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVV 153

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL 386
            ++ ++     +G  ++A  ++  ++E  ++PD+ TF  L+  +   G   ++ +  C  
Sbjct: 154 TYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEG---MILEAQCVF 210

Query: 387 E------VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
           E      VE ++  YNAL+  +C     ++A KL+N M+ KG  P   S+  L++G C +
Sbjct: 211 ETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKS 270

Query: 441 RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL--DVV 498
            +IDEA  +   +       +   ++ ++    + GR   A +L     +  Y L  D++
Sbjct: 271 GRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEE--MRSYGLLPDLM 328

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           +Y++ + GL + G  +EA+ L   M+   + PN + Y +++   C    ++  + L  ++
Sbjct: 329 TYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNL 388

Query: 559 IDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
               I+ D  T   +   + K   S+ A     +M   G +P+
Sbjct: 389 FVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPN 431



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/405 (24%), Positives = 196/405 (48%), Gaps = 14/405 (3%)

Query: 44  FPIILAP-HIVHSTLLNCPSD----LIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTG 98
           F + L P H+  STLLN  S     + A+  F    K   Y  DV ++  +I+ + ++  
Sbjct: 39  FKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKM-GYEPDVITYSTIINGLCKMGS 97

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
               ++ ++ ++   GC      +   +    + ++    +E   EM   G +PN    +
Sbjct: 98  TTMAIQ-LLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYS 156

Query: 159 IVMDVLFKIGRVDLGIKVLKE----TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
            ++     +GR +    + K+      +P+ ++FNI +  L K   +   + V   M+ K
Sbjct: 157 SILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEK 216

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           G  PNV  +  L++ +C   ++ EA +L  +M+  G + SV ++ +LI G  +  R+D A
Sbjct: 217 GVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEA 276

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             L  +M     +P+ VTY++L+KGF +      A   L+ + S G  PDL+ +++++D 
Sbjct: 277 KGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDG 336

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEAD 391
           L K G  D+A ++   + E K+ P+ + +  L+  +C  G+     +L   L    ++ D
Sbjct: 337 LCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPD 396

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
           +V Y  ++S   K G  N+A +L+  M   G  P++ ++  +++G
Sbjct: 397 VVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQG 441



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/388 (24%), Positives = 174/388 (44%), Gaps = 69/388 (17%)

Query: 218 PNVRMFEILLNCFCKMGR--IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAG 275
           P+V    IL+NCFC         A+ +LG M  LG   +   ++ L++G     ++  A 
Sbjct: 8   PDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAV 67

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
            L+++MV+ G  P+V+TY+++I G  +    ++A   L  +E +G  P++V ++ +I   
Sbjct: 68  KLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTII--- 124

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVY 395
                        D L + KL+ ++  F   LS +   G             +  ++V Y
Sbjct: 125 -------------DSLCKDKLITEAMEF---LSEMVNRG-------------ISPNVVTY 155

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
           +++L  FC  G  N+A  L+  M+++   PD  +F  L+ GL     I EA  V++ ++ 
Sbjct: 156 SSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIE 215

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
                N + + A++D      +  +A +LF   + +     V SY + I+G  + GR +E
Sbjct: 216 KGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDE 275

Query: 516 AYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTK 575
           A  L ++M H A+ P+  TY  ++  FC++   +  ++LL+                   
Sbjct: 276 AKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLE------------------- 316

Query: 576 FIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
                           EM + GL+PD M
Sbjct: 317 ----------------EMRSYGLLPDLM 328



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/292 (21%), Positives = 128/292 (43%), Gaps = 5/292 (1%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
           +R+   D  +F+ ++  +++  G     + +   +   G      T+   +  Y      
Sbjct: 180 ERNVMPDTVTFNILVDGLSK-EGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQM 238

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIA 191
               + F+ M R G  P+  + NI++    K GR+D    +L E       P+ ++++  
Sbjct: 239 DEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTL 298

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           +   C+     + + ++  M   G  P++  + I+L+  CK G + EA++LL  M     
Sbjct: 299 MKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKI 358

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
             ++  +T+LI G     +L+ A  L+  +   G  P+VVTYT +I G ++  + + A  
Sbjct: 359 EPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACE 418

Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
               +   G  P+   +NV+I    + G   +A  + + ++      DS TF
Sbjct: 419 LFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTF 470



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 107/235 (45%), Gaps = 10/235 (4%)

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA---FDEMGRFGFTPNTFARNIVMDVLFK 166
           + R GC    +++ + ++ + +    G + EA     EM     TP+T   + +M    +
Sbjct: 248 MVRKGCAPSVRSYNILIKGHCKS---GRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQ 304

Query: 167 IGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
            GR     K+L+E +    LP+ ++++I L  LCK   +    +++  M      PN+ +
Sbjct: 305 DGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFI 364

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           + IL+   C  G++  A +L   +   G    V  +TV+I G  +    + A  L+  M 
Sbjct: 365 YTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMA 424

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
            +GC PN  TY  +I+GF+     S A   ++ +   G + D     +L D  S+
Sbjct: 425 VHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQMLSDLESR 479


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/468 (25%), Positives = 227/468 (48%), Gaps = 16/468 (3%)

Query: 108 GELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKI 167
           GE+AR G      T+   +    +    G  +E F+E+   G  P+    N ++D L K 
Sbjct: 26  GEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKA 85

Query: 168 GRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG--FYPNVR 221
           G ++   ++  +      +PN +++++ +  LCK+  +   +++I  M RK     PN+ 
Sbjct: 86  GDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNII 145

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMI--TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
            +   L+  CK    AEA +L+  +   +L  S     ++ LIDG  +  ++D A  +++
Sbjct: 146 TYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFD 205

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
            M+  G  PNV+TY +L+ G  +A     A + ++ +  +G  PD++ ++VL+D   K  
Sbjct: 206 DMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKAS 265

Query: 340 SYDDALDVYDGLLELK-----LVPDSYTFCSLLSTVCLSGRF---SLLPKLVCGLEVEAD 391
             D+AL++  G+         LVPD  TF  L++  C +G F   S L + +    ++ D
Sbjct: 266 RVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPD 325

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
           ++ + AL+   CKAG    A  + + M + G  P+  ++  L+ GLC + +I+EA    +
Sbjct: 326 VMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLE 385

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
            +V +    ++  + ++V  L  A R   A+QL        +  D V+Y + + GL + G
Sbjct: 386 EMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSG 445

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           +TE+A  +  +M      P+++T+        +  N+     LL+ V+
Sbjct: 446 KTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVL 493



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 122/462 (26%), Positives = 224/462 (48%), Gaps = 19/462 (4%)

Query: 158 NIVMDVLFKIGRVDLGIKVLK-----ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
           NIV+  L + G     +++ +     +   P  +++N  +  LCK ND+    ++   +V
Sbjct: 5   NIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELV 64

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
            +G +P+V  +  L++  CK G + EA +L G M + G   +V  ++VLI+G  ++ R+D
Sbjct: 65  ERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRID 124

Query: 273 MAGYLWEKMVQNGCS--PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH---APDLVF 327
            A  L ++M +  C   PN++TY S + G  +  M + A   +  L  +G    +PD V 
Sbjct: 125 EARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLR-DGSLRVSPDTVT 183

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL- 386
            + LID L K G  D+A  V+D ++    VP+  T+ +L++ +C + +      ++  + 
Sbjct: 184 FSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV 243

Query: 387 --EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP-----DNYSFVGLLRGLCG 439
              V  D++ Y+ L+  FCKA   ++A++L + M  +G TP     D  +F  L+ G C 
Sbjct: 244 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACK 303

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
           A   ++A  +++ +V  N   +     A++D L +AG+   A  +         P +VV+
Sbjct: 304 AGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVT 363

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           Y   + GL + GR EEA     +M      P++ TY  ++ + C+        +L+ ++ 
Sbjct: 364 YNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELK 423

Query: 560 DARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
               + D  T   L   ++K   +  A+  L EM   G  PD
Sbjct: 424 SFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPD 465



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 121/498 (24%), Positives = 226/498 (45%), Gaps = 23/498 (4%)

Query: 48  LAPHIV-HSTLLN--CPS-DLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETV 103
           +AP IV ++T++N  C S DL A         +R +  DV +++ +I  + +  G  E  
Sbjct: 33  VAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCK-AGDLEEA 91

Query: 104 RGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFG--FTPNTFARNIVM 161
           R + G+++  GCV    T+ + +    +        E   EM R      PN    N  +
Sbjct: 92  RRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFL 151

Query: 162 DVLFKIGRVDLGIKVLKETQ------LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG 215
           D L K        ++++  +       P+ ++F+  +  LCK   +     V   M+  G
Sbjct: 152 DGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGG 211

Query: 216 FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAG 275
           + PNV  +  L+N  CK  ++  A+ ++  M+  G +  V  ++VL+D F +  R+D A 
Sbjct: 212 YVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEAL 271

Query: 276 YLWEKMVQNGCSPNV-----VTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
            L   M   GC+PNV     VT+  LI G  +A  F  A +  + + ++   PD++    
Sbjct: 272 ELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGA 331

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLVCGL 386
           LID L K G  + A D+ D +  L + P+  T+ +L+  +C SGR       L ++V   
Sbjct: 332 LIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSG 391

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
            V  D + Y +L+   C+A   + A++L + +   G+ PD  ++  L+ GL  + K ++A
Sbjct: 392 CV-PDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQA 450

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
           I V + +V      ++    A    L  +G     ++L R  + +    D  + +  +  
Sbjct: 451 ITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDW 510

Query: 507 LLEGGRTEEAYILYSQMK 524
           +   G+ ++   +  + +
Sbjct: 511 VCRSGKLDDVKAMIKEFE 528


>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 894

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 138/544 (25%), Positives = 248/544 (45%), Gaps = 31/544 (5%)

Query: 45  PIILAPHIVHSTLLNCPS--DLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFET 102
           P +   H+  S+L N P+   L AL+FF W   Q  + H V S+  ++ ++ R  G    
Sbjct: 65  PSLTPTHL--SSLFNNPNLHPLTALNFFKWIHYQHGFIHTVHSYQPLLFILVR-NGFLRA 121

Query: 103 VRGIVGELARVGCVIKAQTFLLFL--------------RIYWRGEMYGMVLE---AFDEM 145
              +   + +         F+L L              R++     +G++ E    F +M
Sbjct: 122 AENVRNSMIKSCVSSHEARFVLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDM 181

Query: 146 GRFGFTPNTFARNIVMDVLFKIGRVDLG----IKVLKETQLPNFLSFNIALCNLCKLNDV 201
              G  PN  + N +++   KIG V +       ++K     +  ++   +   CK++++
Sbjct: 182 LNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHEL 241

Query: 202 SNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVL 261
            +   V  +M ++G   N   +  L++ FC++G+I EA +L   M   G    V  +TVL
Sbjct: 242 GDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVL 301

Query: 262 IDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH 321
           +  F  + +   A   +E+MV+NG  PNV TYT LI  F +          L  +  +G 
Sbjct: 302 VAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGL 361

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC----LSGRFS 377
              +V  N LID   K G  +DA+ V D +   K+ P+S T+  L+   C    +    +
Sbjct: 362 VSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMA 421

Query: 378 LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
           LL K+    ++  +LV YN L+   CKA   + A +L++ M+  GF PD  +F   +  L
Sbjct: 422 LLNKMYEN-KLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCL 480

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
           C   K+++A  V++ +   +   N  ++TA++D   +A +   A  LF+R + E    + 
Sbjct: 481 CKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNS 540

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
           +++ V + GL + G+ E+A  L   M      P  +TY +++    +E +       L  
Sbjct: 541 ITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQ 600

Query: 558 VIDA 561
           +I +
Sbjct: 601 MISS 604



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 108/465 (23%), Positives = 217/465 (46%), Gaps = 8/465 (1%)

Query: 85  SFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDE 144
           SF+ M++   ++ G     +     L + G    + T+   +  Y +    G   + F+ 
Sbjct: 192 SFNTMVNAHCKI-GNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEI 250

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLND 200
           M + G   N  +   ++    ++G++D  +++  + +     P+  ++ + +   C++  
Sbjct: 251 MPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGK 310

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
            +        MV  G  PNV  + +L++ FCK+G++ E  ++L  M+  G   SV  +  
Sbjct: 311 ETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNA 370

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           LIDG+ +   ++ A  + + M  N   PN  TY  LI GF   K    A + L+ +    
Sbjct: 371 LIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENK 430

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
            +P+LV +N LI  L K    D A  ++  +++   VPD  TFC+ +  +C  G+     
Sbjct: 431 LSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAH 490

Query: 381 KLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
           ++   L+    EA+  +Y AL+  +CKA   + A  L+  ML +G  P++ +F  LL GL
Sbjct: 491 QVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGL 550

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
               K+++A+++   +   +     H +T +++ ++      +A     + I      +V
Sbjct: 551 RKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNV 610

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
           V+YT  I+     GR  EA  +  ++K   +  +++ Y V++ ++
Sbjct: 611 VTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAY 655



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 100/433 (23%), Positives = 198/433 (45%), Gaps = 16/433 (3%)

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV---LKETQLP-NFLSFNIALCNLCKLND 200
           M + GF P+       +D L K+G+V+   +V   LKE     N   +   +   CK   
Sbjct: 461 MIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEK 520

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
            S+   +   M+ +G +PN   F +LL+   K G++ +A  L+ +M       +V+ +T+
Sbjct: 521 FSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTI 580

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           LI+   R    D A    ++M+ +GC PNVVTYT+ IK +        A   +  ++ EG
Sbjct: 581 LIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEG 640

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
              D   ++VL++    +G  D A  V   + +    P   T+  LL  +     F    
Sbjct: 641 ILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLI----FEKYN 696

Query: 381 KLVCGLEVEA-DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
           K   GL++ + ++ V NA  + +  A F      L+  M+++G  P+  ++  L++GLC 
Sbjct: 697 KEGMGLDLNSTNISVDNA--NIWKIADF-EIITMLFEKMVEQGCVPNVNTYSKLIKGLCK 753

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
              +  A  ++  +  +  + + ++H +++    + G   +A++L    +   +   + S
Sbjct: 754 VEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLES 813

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           Y + + GL E G  E+A  ++  +       +   ++V+L    ++  +    + L+D++
Sbjct: 814 YKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQ-LRDIM 872

Query: 560 D---ARIELDYHT 569
           +    R+  D HT
Sbjct: 873 EKTGCRLHSDTHT 885



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 75/363 (20%), Positives = 161/363 (44%), Gaps = 3/363 (0%)

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
           V+ ++    F  +V  +  L     + G I E   L   M+  G   ++ ++  +++   
Sbjct: 142 VLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHC 201

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
           ++  + +A   +  +++ G   +  TYTSLI G+ +      A+   +++  EG   + V
Sbjct: 202 KIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEV 261

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL 386
            +  LI    ++G  D+AL+++  + E    PD  T+  L++  C  G+ +   K    +
Sbjct: 262 SYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEM 321

Query: 387 ---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
               +E ++  Y  L+ YFCK G  ++ +++ +TML+KG       F  L+ G C    +
Sbjct: 322 VENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMM 381

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           ++AI V   + +N    N+  +  ++          +A+ L  +    K   ++V+Y   
Sbjct: 382 EDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTL 441

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           I GL +    + A+ L+  M      P+  T+   +   CK   ++   ++ + + +   
Sbjct: 442 IHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHA 501

Query: 564 ELD 566
           E +
Sbjct: 502 EAN 504



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/344 (20%), Positives = 145/344 (42%), Gaps = 37/344 (10%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG 173
           GC   + TF + L    +       +   D MG+F   P      I+++ + +    D  
Sbjct: 535 GCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRA 594

Query: 174 ----IKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
                +++     PN +++   +   C+   +   ++++  +  +G   +  ++++L+N 
Sbjct: 595 NMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNA 654

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLID-------------------------- 263
           +  +G++  A+ +L  M   G   S   +++L+                           
Sbjct: 655 YGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNA 714

Query: 264 GFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP 323
              ++   ++   L+EKMV+ GC PNV TY+ LIKG  + +  S+AF   + ++  G +P
Sbjct: 715 NIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISP 774

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP--DSYTF--CSLLSTVCLSGRFSLL 379
               HN L+    K+G +++AL + D ++E   +   +SY    C L           + 
Sbjct: 775 SENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIF 834

Query: 380 PKLV-CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
             L+ CG     D VV+  LL    + G+ ++  +L + M   G
Sbjct: 835 RSLLSCGYNY--DEVVWKVLLDGLVRKGYVDECSQLRDIMEKTG 876


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 135/576 (23%), Positives = 254/576 (44%), Gaps = 55/576 (9%)

Query: 104 RGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDV 163
           R    +  ++G V    TF + +  Y     +   +E  + MG++  +P+    N ++D 
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDT 252

Query: 164 LFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN 219
           L K GR+    DL + +     LPN  ++NI +   CK+  +    +VI +M +    P+
Sbjct: 253 LCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPD 312

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
           V  + +L+N  C  GRI EA++L   M  L     V ++  LI+G     ++  A  L E
Sbjct: 313 VWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLE 372

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
           +M + G  PN VT+  ++K + +      A + +  +E  G +PD V +N LI+   K G
Sbjct: 373 EMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAG 432

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL------------- 386
           +  +A    D +    +  DS T  ++L T+C   +     KL+                
Sbjct: 433 NMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYG 492

Query: 387 -------------------------EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
                                    E+    V YN ++   C+ G   QA+   N +L+ 
Sbjct: 493 TLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLES 552

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
           G  PD  ++  +L G C    +++A   +  +V N+   +      ++  L   G   KA
Sbjct: 553 GLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKA 612

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
           ++LF   + +   +D V+Y   I  L + GR ++A+ L S+M+   + P+ YTY  ++ +
Sbjct: 613 LKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITA 672

Query: 542 FCKERNIKMVKRLLQDVI------DARIELDYHTSIRLTKFIFKFHSSSSAVNQLV-EMC 594
                 I+  +  +  ++      D  ++LD + ++  ++   +  SSS A ++ + E+C
Sbjct: 673 LTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELC 732

Query: 595 NLGLIPDEM-----WRKLGLLSDETMTPVSLFDGFV 625
             G   D M      ++ G+  D++ T ++L DG +
Sbjct: 733 TEGKYKDAMRIFGESKQKGITVDKS-TYINLMDGLI 767



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 98/386 (25%), Positives = 176/386 (45%), Gaps = 14/386 (3%)

Query: 183 PNFLSFNIALCNLCKL---NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEA 239
           PN L+ N  L +L +    + VS  ++     ++ G  PNV  F I++  +C   +  +A
Sbjct: 168 PNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDA 227

Query: 240 YQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG 299
            + L +M     S     +  ++D   +  RL  A  L   M   G  PN  TY  L+ G
Sbjct: 228 VEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYG 287

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
           + +      A + ++++      PD+  +N+LI+ L   G  ++A  + D +  LKL+PD
Sbjct: 288 YCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPD 347

Query: 360 SYTFCSLLSTVCL-----SGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKL 414
             ++ +L++  CL     S  F LL ++     V+ + V +N ++ ++CK G  + A   
Sbjct: 348 VVSYNTLING-CLEWSKISEAFKLLEEM-SEKGVKPNAVTHNIMVKWYCKEGKMDDASNT 405

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
              M + GF+PD  ++  L+ G C A  + EA      +   N  +++     I+  L  
Sbjct: 406 ITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCR 465

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
             +  +A +L   A    Y +D VSY   I G  + G  + A  L+ +MK   + P+  T
Sbjct: 466 EKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVT 525

Query: 535 YRVMLLSFCK----ERNIKMVKRLLQ 556
           Y  ++   C+    E+ I  +  LL+
Sbjct: 526 YNCIIGGLCQCGKTEQAISKLNELLE 551



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/375 (21%), Positives = 148/375 (39%), Gaps = 30/375 (8%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G+ +     + ++   G      T+   +  Y +    G      DEMGR     ++   
Sbjct: 397 GKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTL 456

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQLPNF----LSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N ++  L +  +++   K+L   +   +    +S+   +    K  +V     +   M  
Sbjct: 457 NTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKE 516

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           K   P+   +  ++   C+ G+  +A   L  ++  G       +  ++ G+ R   ++ 
Sbjct: 517 KEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEK 576

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A     KMV+N   P+V T   L++G     +   A    +   S+G A D V +N LI 
Sbjct: 577 AFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLIT 636

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL-------------LP 380
            L K G  DDA ++   + E +L PD YT+ ++++ +  SGR                LP
Sbjct: 637 SLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLP 696

Query: 381 KLVCGLEVEADLV-------------VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
             V  L+    +V              Y+  +   C  G    A++++     KG T D 
Sbjct: 697 DQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDK 756

Query: 428 YSFVGLLRGLCGARK 442
            +++ L+ GL   RK
Sbjct: 757 STYINLMDGLIKRRK 771


>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 592

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 145/583 (24%), Positives = 261/583 (44%), Gaps = 55/583 (9%)

Query: 61  PSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRL-----TGRFETVRGIVG---ELAR 112
           PS  + +     C K  +  H++QS  +    +  +     +G+ +++   +     +A+
Sbjct: 9   PSPALHIPLHSHCTKSTNINHEIQSHSNKTQFLNFMRNQCKSGKLKSIDEALNFFHTMAK 68

Query: 113 VGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEM-GRFGFTPNTFARNIVMDVLFKIGRVD 171
           +  +     F L L    + + Y   +    EM    G  P+TF  N+V++ L  +  V 
Sbjct: 69  MNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDTFILNVVINSLCHLKLVA 128

Query: 172 LGIKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILL 227
            G  VL    K    P+ ++F I +  LC   DV    +++  + + G+  +V+ + +L+
Sbjct: 129 FGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLI 188

Query: 228 NCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCS 287
           N  CKMG+ +EA   L  M     + +V  ++ ++DG  +   +  A  L  +M   G  
Sbjct: 189 NGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIK 248

Query: 288 PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
           PN+VTYT LI+G      +  A S LD +   G  PDL   N+L+D L K G    A  V
Sbjct: 249 PNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSV 308

Query: 348 YDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPK---LVCGLEVEADLVVYNALLSYFCK 404
              ++ +  VPD +T+ SL+   CL  +     +   L+       D+V Y +L+  +CK
Sbjct: 309 IGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCK 368

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGL------------------------------- 433
               N+A+ L + M+  GFTPD  ++  L                               
Sbjct: 369 IKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQT 428

Query: 434 ----LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
               L GLC ++ + EA++++  +  +N  +N  +++ I+D +  AG+ + A++LF    
Sbjct: 429 CAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLP 488

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
            +   ++V +YT+ I G  + G  ++A  L S M+     P++ TY V +     ER I 
Sbjct: 489 AKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIA 548

Query: 550 MVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVE 592
              + L  + D    +D  T    T+ I  + S++   N+L E
Sbjct: 549 RSIKYLTMMRDKGFSVDATT----TEMIINYLSTNQGDNELRE 587



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 62/291 (21%), Positives = 121/291 (41%), Gaps = 6/291 (2%)

Query: 317 ESEGHAPDLVFHNVLID-CLS-KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC--- 371
           E + H+    F N + + C S K+ S D+AL+ +  + ++  +P    F  LL  +    
Sbjct: 30  EIQSHSNKTQFLNFMRNQCKSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMK 89

Query: 372 -LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
             +   SL+ ++   L ++ D  + N +++  C          +  TML  G  P   +F
Sbjct: 90  HYTTAISLVKEMHSSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTF 149

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             L+ GLC    +  A+ +   +       +   +  +++ L + G+  +A+   R+   
Sbjct: 150 TILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEE 209

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
             +  +VV Y+  + GL + G   EA  L  +M    + PN  TY  ++   C     K 
Sbjct: 210 RNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKE 269

Query: 551 VKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
              LL +++   +  D  +   L   + K      A + +  M  +G +PD
Sbjct: 270 AGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPD 320


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 130/517 (25%), Positives = 244/517 (47%), Gaps = 14/517 (2%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
            G+ E    I+ E+   G    +QT+ L +  + RG+      E  DEM +    P    
Sbjct: 359 AGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLT 418

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            +++++ L + G +     +L+E  +    PN + +   +    K   V   + ++  M 
Sbjct: 419 YSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMR 478

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
            +G  P+V  +  L+  FCK  R+ EA   L  M+      + + +   IDG+ +   ++
Sbjct: 479 EQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEME 538

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
           +A   + +M+  G  PNV  YT+LI+G  +    + AFS    + S     D+  ++VLI
Sbjct: 539 IADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLI 598

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG---RFSLLPKLVCGLEVE 389
             LS+ G   +A  ++  L E  L+P+++T+ SL+S  C  G   + S L + +C   + 
Sbjct: 599 HGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGIN 658

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            D+V YN L+   CKAG   +A  L++ +  +G TP+  ++  ++ G C ++    A  +
Sbjct: 659 PDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQL 718

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
            + +++     +A ++  I++   +  +  KA+ LF+  ++EK     VS+   I G  +
Sbjct: 719 LEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQE-MLEKGFASTVSFNTLIEGYCK 777

Query: 510 GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
            G+ +EA  L  +M      PN  TY  ++   CK   +   KRL  ++ +  +     T
Sbjct: 778 SGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNV---MPT 834

Query: 570 SIRLTKFIFKFHS--SSSAVNQLV-EMCNLGLIPDEM 603
           +   T  +  +H+  + S V+ L  EM   G+ PD+M
Sbjct: 835 AKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKM 871



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/470 (23%), Positives = 208/470 (44%), Gaps = 15/470 (3%)

Query: 137 MVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIAL 192
           M+LE  D     G  P     N ++D   + G ++   ++  E        N + +N  L
Sbjct: 298 MLLEMID----VGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLL 353

Query: 193 CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
             +CK   +    +++  M+ KG  P+ + + +L+   C+   +A A++LL  M     +
Sbjct: 354 NGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLA 413

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
            +V  ++V+I+G  R   L     +  +MV NG  PN V YT+L+    +      +   
Sbjct: 414 PTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMI 473

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
           L+ +  +G  PD+  +N LI    K    ++A      +LE +L P+++T+ + +     
Sbjct: 474 LERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSK 533

Query: 373 SGRFSLLPK-----LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           +G   +  +     L CG  V  ++ +Y AL+   CK G   +A  ++  +L +    D 
Sbjct: 534 AGEMEIADRYFNEMLSCG--VLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDV 591

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
            ++  L+ GL    K+ EA  ++  +       NA  + +++    + G   KA QL   
Sbjct: 592 QTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEE 651

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN 547
             ++    D+V+Y + I GL + G  E A  L+  ++   + PN  TY  M+  +CK +N
Sbjct: 652 MCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKN 711

Query: 548 IKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLG 597
                +LL++++   +  D      +  F  K      A++   EM   G
Sbjct: 712 PTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG 761



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 124/540 (22%), Positives = 238/540 (44%), Gaps = 72/540 (13%)

Query: 134 MYGMVLEAFDEMG-------------RFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK-- 178
           ++ M+++++ +MG              F F P+  + N ++  L K  +V+L  KV    
Sbjct: 156 IFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGM 215

Query: 179 --ETQLPNFLSFNIALCNLCKLNDVSNVKDVI-----------------GMMVRKGFYPN 219
                LP+  ++   +   CK+ +V + K V+                   MV KG  P+
Sbjct: 216 CAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPD 275

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
           +  ++IL+N FC   R  EA  +L  MI +G       +  LIDGF R   ++ A  + +
Sbjct: 276 LYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKD 335

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
           +MV  G   N++ + +L+ G  +A     A   +  +  +G  PD   +++LI+   +  
Sbjct: 336 EMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQ 395

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVC----LSGRFSLLPKLVC-GLEVEA---- 390
           +   A ++ D + + KL P   T+  +++ +C    L G  ++L ++V  GL+  A    
Sbjct: 396 NMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYT 455

Query: 391 -----------------------------DLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
                                        D+  YN+L+  FCKA    +A      ML++
Sbjct: 456 TLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLER 515

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
              P+ +++   + G   A +++ A   +  ++      N  ++TA+++   + G   +A
Sbjct: 516 RLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEA 575

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
             +FR  +  +   DV +Y+V I GL   G+  EA+ ++S+++   + PNA+TY  ++  
Sbjct: 576 FSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISG 635

Query: 542 FCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            CK+ N+    +LL+++    I  D  T   L   + K      A N   ++   GL P+
Sbjct: 636 SCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPN 695



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 104/456 (22%), Positives = 196/456 (42%), Gaps = 56/456 (12%)

Query: 151 TPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKD 206
           +PN+   +++MD   K+G +   + V    +     P+ LS N  L +L K N V     
Sbjct: 151 SPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWK 210

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
           V   M      P+V  +  +++  CK+G + +A +                  VL++   
Sbjct: 211 VFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKR------------------VLLEMGE 252

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF-MEAKMFSIAFSFLDMLESEGHAPDL 325
           + R LD A  L   MV  G  P++ TY  LI GF ME +        L+M++  G  P+ 
Sbjct: 253 KARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDV-GLKPEP 311

Query: 326 VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCG 385
           + +N LID   + G  + A  + D ++                               CG
Sbjct: 312 ITYNALIDGFMRQGDIEQAFRIKDEMV------------------------------ACG 341

Query: 386 LEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
             +EA+L+++N LL+  CKAG   +A+++   M++KG  PD+ ++  L+ G C  + +  
Sbjct: 342 --IEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMAR 399

Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
           A  +   +     A     ++ I++ L   G       + R  ++     + V YT  + 
Sbjct: 400 AFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMT 459

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
              + GR EE+ ++  +M+   + P+ + Y  +++ FCK + ++  +  L ++++ R+  
Sbjct: 460 AHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRP 519

Query: 566 DYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           + HT         K      A     EM + G++P+
Sbjct: 520 NAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPN 555



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/441 (23%), Positives = 196/441 (44%), Gaps = 17/441 (3%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           R E  R  + E+        A T+  F+  Y +     +    F+EM   G  PN     
Sbjct: 501 RMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYT 560

Query: 159 IVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
            +++   K G V     V    L    L +  ++++ +  L +   +     +   +  K
Sbjct: 561 ALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEK 620

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           G  PN   +  L++  CK G + +A QLL  M   G +  +  + +LIDG  +   ++ A
Sbjct: 621 GLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERA 680

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             L++ +   G +PN VTY +++ G+ ++K  + AF  L+ +   G  PD   +NV+++ 
Sbjct: 681 KNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNF 740

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLVCGLEVEA 390
             K   ++ ALD++  +LE K    + +F +L+   C SG+      LL +++   +   
Sbjct: 741 CCKEEKFEKALDLFQEMLE-KGFASTVSFNTLIEGYCKSGKLQEANHLLEEMI-EKQFIP 798

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           + V Y +L+ + CKAG   +A +L+  M ++   P   ++  LL G      + E   ++
Sbjct: 799 NHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALF 858

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP------LDVVSYTVAI 504
           + +V      +   +  ++D     G   +A +L    +V+  P      L + + +V  
Sbjct: 859 EEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIA 918

Query: 505 RGL-LEGGRTEEAYILYSQMK 524
           RG  + G   E A +L S +K
Sbjct: 919 RGFQIAGNMDEAAEVLRSMVK 939


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 133/476 (27%), Positives = 220/476 (46%), Gaps = 13/476 (2%)

Query: 136 GMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSF 188
           G + EA    D M   G  P+ F  N ++  L K G+++     L E Q     P+ ++F
Sbjct: 398 GRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTF 457

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
              +    K   ++        M+  G  PN  ++ +L+N   K G + EA  +   +  
Sbjct: 458 GAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHA 517

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
           LG    V   +  I G  +  R+  A  ++ ++ + G  P+V TY+SLI GF +      
Sbjct: 518 LGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEK 577

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           AF   D +  +G AP++  +N L+D L K G    A  ++DG+ E  L PDS T+ +++ 
Sbjct: 578 AFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMID 637

Query: 369 TVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
             C S      FSL  ++     V+    VYNAL+   CK G   +A+ L+  ML KGF 
Sbjct: 638 GYCKSENVAEAFSLFHEMPSK-GVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA 696

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
               SF  L+ G C + KI EA  ++Q ++      +   +T ++D   +AG+  +A  L
Sbjct: 697 T-TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLL 755

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
           F+        +D V+YT  + G  + G++ E + L+ +M    V P+  TY +++ + CK
Sbjct: 756 FKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCK 815

Query: 545 ERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           E N+    +L  +V+   +         L   + K    + A   L EM  LGL P
Sbjct: 816 EDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKP 871



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 126/513 (24%), Positives = 233/513 (45%), Gaps = 8/513 (1%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G+ E    I+  +  +GC   ++TF L +  Y R    G  LE  DEM +    P+  + 
Sbjct: 293 GKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSY 352

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
             +++ L     + L  K+L++       PN + ++  +        +   + ++  M  
Sbjct: 353 GAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSC 412

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G  P++  +  +++C  K G++ EA   L  +   G       +   I G+ +  ++  
Sbjct: 413 SGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTE 472

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A   +++M+ +G  PN   YT LI G  +A     A S    L + G  PD+   +  I 
Sbjct: 473 AAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIH 532

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEA 390
            L K G   +AL V+  L E  LVPD +T+ SL+S  C  G      +L   +C   +  
Sbjct: 533 GLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAP 592

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           ++ +YNAL+   CK+G   +A KL++ M +KG  PD+ ++  ++ G C +  + EA +++
Sbjct: 593 NIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLF 652

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
             +       ++ V+ A+V    + G   KA+ LFR  +++K     +S+   I G  + 
Sbjct: 653 HEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFRE-MLQKGFATTLSFNTLIDGYCKS 711

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
            + +EA  L+ +M    + P+  TY  ++   CK   ++    L +++ +  + +D  T 
Sbjct: 712 CKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTY 771

Query: 571 IRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
             L     K   SS       +M   G+ PDE+
Sbjct: 772 TSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEV 804



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 126/495 (25%), Positives = 229/495 (46%), Gaps = 48/495 (9%)

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
           +   G V    T+ +      R +        F+EM + G  P+  A + ++D   + G 
Sbjct: 200 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 259

Query: 170 VD--LGIK-VLKETQLP-NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEI 225
           +D  L IK V+    +P N +++N+ +  LCK   +    +++  M+  G  PN R F +
Sbjct: 260 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 319

Query: 226 LLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
           L+  +C+   +  A +LL  M       S  ++  +I+G    + L +A  L EKM  +G
Sbjct: 320 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 379

Query: 286 CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL 345
             PNVV Y++LI G+        A   LD +   G APD+  +N +I CLSK G  ++A 
Sbjct: 380 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA- 438

Query: 346 DVYDGLLELK---LVPDSYTFCSL------------------------------LSTVCL 372
             Y  LLE++   L PD+ TF +                               L TV +
Sbjct: 439 STY--LLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLI 496

Query: 373 SGRF---SLLPKL-----VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
           +G F   +L+  L     +  L V  D+   +A +    K G   +A+K+++ + +KG  
Sbjct: 497 NGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLV 556

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           PD +++  L+ G C   ++++A  ++  + +   A N  ++ A+VD L ++G   +A +L
Sbjct: 557 PDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKL 616

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
           F     +    D V+Y+  I G  +     EA+ L+ +M    V P+++ Y  ++   CK
Sbjct: 617 FDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCK 676

Query: 545 ERNIKMVKRLLQDVI 559
           E +++    L ++++
Sbjct: 677 EGDMEKAMNLFREML 691



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 106/495 (21%), Positives = 202/495 (40%), Gaps = 44/495 (8%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D+  ++ +IS +++  G+ E     + E+   G    A TF  F+  Y +        + 
Sbjct: 418 DIFCYNAIISCLSK-AGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKY 476

Query: 142 FDEMGRFGFTPNT--------------------------FARNIVMDV---------LFK 166
           FDEM   G  PN                            A  ++ DV         L K
Sbjct: 477 FDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLK 536

Query: 167 IGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
            GRV   +KV  E +    +P+  +++  +   CK  +V    ++   M  KG  PN+ +
Sbjct: 537 NGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFI 596

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           +  L++  CK G I  A +L   M   G       ++ +IDG+ +   +  A  L+ +M 
Sbjct: 597 YNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMP 656

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
             G  P+   Y +L+ G  +      A +    +  +G A  L F N LID   K     
Sbjct: 657 SKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSF-NTLIDGYCKSCKIQ 715

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF---SLLPKLVCGLEVEADLVVYNALL 399
           +A  ++  ++  +++PD  T+ +++   C +G+    +LL K +    +  D V Y +L+
Sbjct: 716 EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLM 775

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
             + K G  ++   L+  M+ KG  PD  ++  ++   C    + EA  +   +V     
Sbjct: 776 YGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGML 835

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
               +H  ++  L +     +A +L            + + +  +R   E G+ +EA  +
Sbjct: 836 TKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRV 895

Query: 520 YSQMKHIAVPPNAYT 534
           +  +K + + P+  T
Sbjct: 896 FEGVKSLGLVPDTTT 910



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 104/459 (22%), Positives = 185/459 (40%), Gaps = 39/459 (8%)

Query: 182 LPNFL-SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM-----------------F 223
           +P FL SF+I    LC          V+  M+R  +  +  +                 F
Sbjct: 100 VPQFLDSFSILAVQLCNSELFGLANGVLTQMIRTPYSSSSILDSVLFWFRNYGGSSPVVF 159

Query: 224 EILLNCFCKMGRIAEAYQLL------GLMITL------------GTSLSVNAWTVLIDGF 265
           +IL++ + +MG + EA  +        ++I+L            G   +   +T++  G 
Sbjct: 160 DILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLRSMGEKGLVPNTYTYTIITAGL 219

Query: 266 RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL 325
            R +R++ A   +E+M + G  P+    ++LI GFM            D++ S G   +L
Sbjct: 220 CRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINL 279

Query: 326 VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCG 385
           + +NVLI  L K G  + A ++  G++ L   P+S TFC L+   C         +L+  
Sbjct: 280 ITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDE 339

Query: 386 LEVE---ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
           +E        V Y A+++  C     + A KL   M   G  P+   +  L+ G     +
Sbjct: 340 MEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGR 399

Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTV 502
           I+EA  +  G+  +  A +   + AI+  L +AG+  +A              D V++  
Sbjct: 400 IEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGA 459

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
            I G  + G+  EA   + +M    + PN   Y V++    K  N+     + + +    
Sbjct: 460 FILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALG 519

Query: 563 IELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           +  D  T       + K      A+    E+   GL+PD
Sbjct: 520 VLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPD 558



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 79/361 (21%), Positives = 140/361 (38%), Gaps = 35/361 (9%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           +G  +  R +   +   G    + T+   +  Y + E        F EM   G  P++F 
Sbjct: 607 SGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFV 666

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQLPNF---LSFNIALCNLCKLNDVSNVKDVIGMMVR 213
            N ++    K G ++  + + +E     F   LSFN  +   CK   +     +   M+ 
Sbjct: 667 YNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIA 726

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           K   P+   +  +++  CK G++ EA  L   M      +    +T L+ G+ +L +   
Sbjct: 727 KQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSE 786

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
              L+EKMV  G  P+ VTY  +I    +      AF   D +  +G       H++LI 
Sbjct: 787 VFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLIT 846

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLV 393
            L K     +A  + D + EL L P S   CS                            
Sbjct: 847 ALCKREDLTEASKLLDEMGELGLKP-SLAACS---------------------------- 877

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
               L+  F +AG  ++A +++  +   G  PD  + + L+ G       ++A N+ + +
Sbjct: 878 ---TLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQL 934

Query: 454 V 454
           V
Sbjct: 935 V 935


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/434 (26%), Positives = 215/434 (49%), Gaps = 10/434 (2%)

Query: 174 IKVLKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCK 232
           ++ +KE+ L P+ +++N  L  LCK N +  V  ++  MV  G  P+   +  ++ C C+
Sbjct: 185 MEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCE 244

Query: 233 MGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVT 292
            G+  EA ++L  MI       V  +  L+DGF ++ ++D A  L E MV   C+P V+T
Sbjct: 245 SGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVIT 304

Query: 293 YTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
           YT+LI GF  A   + A+  ++ +   G +PDLV +N L+D L K G  ++A ++ + ++
Sbjct: 305 YTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMV 364

Query: 353 ELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPN 409
           E    PD  T+  L++ +C  G+     LL +++     + +LV +N ++  FCKAG  +
Sbjct: 365 EKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVD 424

Query: 410 QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
           +  K+   M +   TPD  ++  L+ G C A ++ +A  +  GI  +  +     +++++
Sbjct: 425 EGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL-GISPDKAS-----YSSML 478

Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
           + L   G+  +A ++      +  P     Y + I GL +  R +EA  +   M      
Sbjct: 479 EGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCE 538

Query: 530 PNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQ 589
           PN YTY +++   CK + ++    +L  +++     D  T   L     K +   +A   
Sbjct: 539 PNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQC 598

Query: 590 LVEMCNLGLIPDEM 603
              M + G  PD++
Sbjct: 599 FKTMRDSGCEPDKL 612



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/504 (23%), Positives = 231/504 (45%), Gaps = 8/504 (1%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
           +R    DV ++  +I V    T   +  R ++ ++   G       +   L    +    
Sbjct: 155 ERSCVPDVITYTSLI-VGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQL 213

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK---ETQL-PNFLSFNIA 191
             V +  +EM   G  P+TF+ N V+  L + G+ +   K+L+   E +  P+ +++N  
Sbjct: 214 EEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSL 273

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           +   CK++ +   + ++  MV +   P V  +  L+  F +  R+A+AY+++  M   G 
Sbjct: 274 MDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGI 333

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
           S  +  +  L+DG  +  +L+ A  L E MV+  C+P+VVTY+ L+ G  +      A  
Sbjct: 334 SPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARL 393

Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
            L+M+   G  P+LV  N +ID   K G  D+   V + + E+   PD  T+ +L+   C
Sbjct: 394 LLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYC 453

Query: 372 LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
            + R      +   L +  D   Y+++L   C  G   +A ++ + M  +G  P +  + 
Sbjct: 454 KANRMQDAFAI---LGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYA 510

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            ++ GLC   + DEA+ + Q +       N + ++ +++ L +  R   AI +    + +
Sbjct: 511 LIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEK 570

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
               DV +YT  I G  +  + + AY  +  M+     P+   Y +++  FC+  N++  
Sbjct: 571 GCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKA 630

Query: 552 KRLLQDVIDARIELDYHTSIRLTK 575
             ++Q +++     D  T   L +
Sbjct: 631 IEVMQLMLEKGCNPDAATYFSLMR 654



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/434 (24%), Positives = 201/434 (46%), Gaps = 5/434 (1%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET 180
           T+   +  + R     MVLE  +EM    F+P+    N ++    +IG +D  +   +  
Sbjct: 26  TYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSHFRGK 85

Query: 181 QL--PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAE 238
               P   ++ I +  LC+   +     ++  M++K  +P+  ++  L+   CKMG+I  
Sbjct: 86  MWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDA 145

Query: 239 AYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIK 298
           A  +L +M+       V  +T LI G  +   LD A  L EKM ++G +P+ V Y +L+ 
Sbjct: 146 ARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLN 205

Query: 299 GFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP 358
           G  +          L+ +   G  PD   +N ++ CL + G Y++A  + + ++E K  P
Sbjct: 206 GLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGP 265

Query: 359 DSYTFCSLLSTVCLSGRFSLLPKLV---CGLEVEADLVVYNALLSYFCKAGFPNQAVKLY 415
           D  T+ SL+   C   +     +L+    G      ++ Y  L+  F +A     A ++ 
Sbjct: 266 DVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVM 325

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
             M   G +PD  ++  LL GLC A K++EA  + + +V  + A +   ++ +V+ L + 
Sbjct: 326 EDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKL 385

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
           G+   A  L    +      ++V++   I G  + G+ +E + +   MK ++  P+  TY
Sbjct: 386 GKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTY 445

Query: 536 RVMLLSFCKERNIK 549
             ++  +CK   ++
Sbjct: 446 STLIDGYCKANRMQ 459



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/414 (22%), Positives = 191/414 (46%), Gaps = 44/414 (10%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG-------- 234
           P+  ++   +    +  +   V ++   M+ + F P+V     +L  +C++G        
Sbjct: 22  PSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSH 81

Query: 235 -------------------------RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLR 269
                                    RI EAYQLL  MI          +  LI G  ++ 
Sbjct: 82  FRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMG 141

Query: 270 RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHN 329
           ++D A  + + M++  C P+V+TYTSLI G  +      A   ++ ++  G  PD V +N
Sbjct: 142 KIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYN 201

Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLV-- 383
            L++ L K    ++   + + ++E    PD++++ ++++ +C SG++     +L K++  
Sbjct: 202 ALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEK 261

Query: 384 -CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
            CG     D+V YN+L+  FCK    ++A +L   M+ +   P   ++  L+ G   A +
Sbjct: 262 KCG----PDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADR 317

Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTV 502
           + +A  V + +     + +   +  ++D L +AG+  +A +L    + +    DVV+Y++
Sbjct: 318 LADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSI 377

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
            + GL + G+ ++A +L   M      PN  T+  M+  FCK   +    ++L+
Sbjct: 378 LVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLE 431



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/396 (24%), Positives = 187/396 (47%), Gaps = 45/396 (11%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV +++ ++    +++   E  R ++ ++    C     T+   +  + R +        
Sbjct: 266 DVVTYNSLMDGFCKVSKMDEAER-LLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRV 324

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCK 197
            ++M + G +P+    N ++D L K G+++   ++L+    +   P+ ++++I +  LCK
Sbjct: 325 MEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCK 384

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
           L  V + + ++ MM+ +G  PN+  F  +++ FCK G++ E +++L LM  +  +  V  
Sbjct: 385 LGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVT 444

Query: 258 WTVLIDGFRRLRRL-----------DMAGY------------------LWEKMVQNGCSP 288
           ++ LIDG+ +  R+           D A Y                  + + M + GC P
Sbjct: 445 YSTLIDGYCKANRMQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPP 504

Query: 289 NVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVY 348
               Y  +I G  + +    A   L ++   G  P+L  +++LI+ L K    +DA++V 
Sbjct: 505 TSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVL 564

Query: 349 DGLLELKLVPDSYTFCSLLSTVCLSGR-------FSLLPKLVCGLEVEADLVVYNALLSY 401
           D +LE   VPD  T+ SL+   C   +       F  +    C    E D + YN L+S 
Sbjct: 565 DVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGC----EPDKLAYNILISG 620

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
           FC++G   +A+++   ML+KG  PD  ++  L+R L
Sbjct: 621 FCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSL 656



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 81/342 (23%), Positives = 154/342 (45%), Gaps = 14/342 (4%)

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
           ++R L+   +  E+   +   P+  TY +LI GF  A    +     + + +   +PD++
Sbjct: 2   KVRPLEGYSFFRERF-SDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVI 60

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKL 382
            HN ++    ++G  D AL  + G  ++   P ++T+C L+  +C   R    + LL ++
Sbjct: 61  THNTILKAYCQIGDLDRALSHFRG--KMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEM 118

Query: 383 VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
           +   +   D  VYN L++  CK G  + A  +   ML++   PD  ++  L+ G C    
Sbjct: 119 I-QKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNA 177

Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTV 502
           +DEA  + + +  +    +   + A+++ L +  +  +  +L    +      D  SY  
Sbjct: 178 LDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNT 237

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
            +  L E G+ EEA  +  +M      P+  TY  ++  FCK   +   +RLL+D++  R
Sbjct: 238 VVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRR 297

Query: 563 IELDYHTSIRLTKFIFKFHSS---SSAVNQLVEMCNLGLIPD 601
                 T I  T  I  F  +   + A   + +M   G+ PD
Sbjct: 298 CA---PTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPD 336



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 69/295 (23%), Positives = 144/295 (48%), Gaps = 3/295 (1%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
           ++D   DV ++  +++ + +L G+ +  R ++  +   GC     TF   +  + +    
Sbjct: 365 EKDCAPDVVTYSILVNGLCKL-GKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKV 423

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNL 195
               +  + M     TP+    + ++D   K  R+     +L  +  P+  S++  L  L
Sbjct: 424 DEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILGIS--PDKASYSSMLEGL 481

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
           C    V   ++V+ +M ++G  P    + +++   C + R  EA ++L +M   G   ++
Sbjct: 482 CSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNL 541

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
             +++LI+G  + +R++ A  + + M++ GC P+V TYTSLI GF +      A+     
Sbjct: 542 YTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKT 601

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
           +   G  PD + +N+LI    + G+ + A++V   +LE    PD+ T+ SL+ ++
Sbjct: 602 MRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSL 656



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/358 (25%), Positives = 149/358 (41%), Gaps = 46/358 (12%)

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA--- 274
           P+   +  L+  F + G      ++   M+    S  V     ++  + ++  LD A   
Sbjct: 22  PSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSH 81

Query: 275 --GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD-MLESEGHAPDLVFHNVL 331
             G +W       CSP   TY  LI G  + +    A+  LD M++ + H PD   +N L
Sbjct: 82  FRGKMW-------CSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCH-PDAAVYNCL 133

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEAD 391
           I  L KMG  D A +V   +LE   VPD  T+ SL+   C +                  
Sbjct: 134 IAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQT------------------ 175

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
               NAL          ++A KL   M + G TPD  ++  LL GLC   +++E   + +
Sbjct: 176 ----NAL----------DEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLE 221

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
            +V      +   +  +V  L E+G+  +A ++  + I +K   DVV+Y   + G  +  
Sbjct: 222 EMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVS 281

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
           + +EA  L   M      P   TY  ++  F +   +    R+++D+  A I  D  T
Sbjct: 282 KMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVT 339


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 133/476 (27%), Positives = 220/476 (46%), Gaps = 13/476 (2%)

Query: 136 GMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSF 188
           G + EA    D M   G  P+ F  N ++  L K G+++     L E Q     P+ ++F
Sbjct: 487 GRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTF 546

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
              +    K   ++        M+  G  PN  ++ +L+N   K G + EA  +   +  
Sbjct: 547 GAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHA 606

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
           LG    V   +  I G  +  R+  A  ++ ++ + G  P+V TY+SLI GF +      
Sbjct: 607 LGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEK 666

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           AF   D +  +G AP++  +N L+D L K G    A  ++DG+ E  L PDS T+ +++ 
Sbjct: 667 AFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMID 726

Query: 369 TVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
             C S      FSL  ++     V+    VYNAL+   CK G   +A+ L+  ML KGF 
Sbjct: 727 GYCKSENVAEAFSLFHEMPSK-GVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA 785

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
               SF  L+ G C + KI EA  ++Q ++      +   +T ++D   +AG+  +A  L
Sbjct: 786 T-TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLL 844

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
           F+        +D V+YT  + G  + G++ E + L+ +M    V P+  TY +++ + CK
Sbjct: 845 FKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCK 904

Query: 545 ERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           E N+    +L  +V+   +         L   + K    + A   L EM  LGL P
Sbjct: 905 EDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKP 960



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 127/513 (24%), Positives = 234/513 (45%), Gaps = 8/513 (1%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G+ E    I+  +  +GC   ++TF L +  Y R    G  LE  DEM +    P+  + 
Sbjct: 382 GKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSY 441

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
             +++ L     + L  K+L++       PN + ++I +        +   + ++  M  
Sbjct: 442 GAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSC 501

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G  P++  +  +++C  K G++ EA   L  +   G       +   I G+ +  ++  
Sbjct: 502 SGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTE 561

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A   +++M+ +G  PN   YT LI G  +A     A S    L + G  PD+   +  I 
Sbjct: 562 AAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIH 621

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEA 390
            L K G   +AL V+  L E  LVPD +T+ SL+S  C  G      +L   +C   +  
Sbjct: 622 GLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAP 681

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           ++ +YNAL+   CK+G   +A KL++ M +KG  PD+ ++  ++ G C +  + EA +++
Sbjct: 682 NIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLF 741

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
             +       ++ V+ A+V    + G   KA+ LFR  +++K     +S+   I G  + 
Sbjct: 742 HEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFRE-MLQKGFATTLSFNTLIDGYCKS 800

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
            + +EA  L+ +M    + P+  TY  ++   CK   ++    L +++ +  + +D  T 
Sbjct: 801 CKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTY 860

Query: 571 IRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
             L     K   SS       +M   G+ PDE+
Sbjct: 861 TSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEV 893



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 138/608 (22%), Positives = 251/608 (41%), Gaps = 111/608 (18%)

Query: 45  PIILAPHIV----HSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRF 100
           P  L P ++    H   +  P  L  L FF W   Q      + SF  +++V    +  F
Sbjct: 66  PSKLNPDVIRAVLHQNQVGDPKRL--LDFFYWSQSQMGVPQFLDSFS-ILAVQLCNSELF 122

Query: 101 ETVRGIVGELARVGCVIKA--QTFLLFLRIYWRGE--MYGMVLEAFDEMGRFGFTPNTF- 155
               G++ ++ R      +   + L + R Y      ++ ++++++  MG      N F 
Sbjct: 123 GLANGVLTQMIRTPYSSSSILDSVLFWFRNYGGSSPVVFDILIDSYKRMGMLDEAANVFF 182

Query: 156 -ARN-----------IVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCKLN 199
            A+N            ++  L K G ++L  KV    L      +  ++   +  LCK  
Sbjct: 183 VAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTG 242

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
           D+   K V+  M  KG  PN  ++ +++   C++G I EA +L   M   G   +   +T
Sbjct: 243 DLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYT 302

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
           ++  G  R +R++ A   +E+M + G  P+    ++LI GFM            D++ S 
Sbjct: 303 IITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSC 362

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS---GR- 375
           G   +L+ +NVLI  L K G  + A ++  G++ L   P+S TFC L+   C     GR 
Sbjct: 363 GIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRA 422

Query: 376 -------------------------------FSLLPKLVCGLE---VEADLVVYNALLSY 401
                                           SL  KL+  +    ++ ++VVY+ L+  
Sbjct: 423 LELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMA 482

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN------------- 448
           +   G   +A +L + M   G  PD + +  ++  L  A K++EA               
Sbjct: 483 YASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPD 542

Query: 449 ---------------------------VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
                                      +  G++ NNP     ++T +++   +AG   +A
Sbjct: 543 AVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNP-----LYTVLINGHFKAGNLMEA 597

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
           + +FRR        DV + +  I GLL+ GR +EA  ++S++K   + P+ +TY  ++  
Sbjct: 598 LSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISG 657

Query: 542 FCKERNIK 549
           FCK+  ++
Sbjct: 658 FCKQGEVE 665



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 103/494 (20%), Positives = 210/494 (42%), Gaps = 42/494 (8%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D+  ++ +IS +++  G+ E     + E+   G    A TF  F+  Y +        + 
Sbjct: 507 DIFCYNAIISCLSK-AGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKY 565

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           FDEM   G  PN     ++++  FK G +   + + +       LP+  + +  +  L K
Sbjct: 566 FDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLK 625

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              V     V   +  KG  P+V  +  L++ FCK G + +A++L   M   G + ++  
Sbjct: 626 NGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFI 685

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  L+DG  +   +  A  L++ M + G  P+ VTY+++I G+ +++  + AFS    + 
Sbjct: 686 YNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMP 745

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVY------------------DG--------- 350
           S+G  P    +N L+    K G  + A++++                  DG         
Sbjct: 746 SKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQE 805

Query: 351 -------LLELKLVPDSYTFCSLLSTVCLSGRF---SLLPKLVCGLEVEADLVVYNALLS 400
                  ++  +++PD  T+ +++   C +G+    +LL K +    +  D V Y +L+ 
Sbjct: 806 ASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMY 865

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
            + K G  ++   L+  M+ KG  PD  ++  ++   C    + EA  +   +V      
Sbjct: 866 GYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLT 925

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
              +H  ++  L +     +A +L            + +    +R   E G+ +EA  ++
Sbjct: 926 KGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVF 985

Query: 521 SQMKHIAVPPNAYT 534
             +K + + P+  T
Sbjct: 986 EGVKSLGLVPDTTT 999



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/361 (21%), Positives = 139/361 (38%), Gaps = 35/361 (9%)

Query: 97   TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
            +G  +  R +   +   G    + T+   +  Y + E        F EM   G  P++F 
Sbjct: 696  SGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFV 755

Query: 157  RNIVMDVLFKIGRVDLGIKVLKETQLPNF---LSFNIALCNLCKLNDVSNVKDVIGMMVR 213
             N ++    K G ++  + + +E     F   LSFN  +   CK   +     +   M+ 
Sbjct: 756  YNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIA 815

Query: 214  KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            K   P+   +  +++  CK G++ EA  L   M      +    +T L+ G+ +L +   
Sbjct: 816  KQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSE 875

Query: 274  AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
               L+EKMV  G  P+ VTY  +I    +      AF   D +  +G       H++LI 
Sbjct: 876  VFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLIT 935

Query: 334  CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLV 393
             L K     +A  + D + EL L P                                 L 
Sbjct: 936  ALCKREDLTEASKLLDEMGELGLKPS--------------------------------LA 963

Query: 394  VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
              N L+  F +AG  ++A +++  +   G  PD  + + L+ G       ++A N+ + +
Sbjct: 964  ACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQL 1023

Query: 454  V 454
            V
Sbjct: 1024 V 1024


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/468 (25%), Positives = 224/468 (47%), Gaps = 37/468 (7%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET---QLPNFLSFNIALCNLC 196
           E F+ M     +P+    N ++D LF+ G+++  + + +E    +  + +SFNI +  LC
Sbjct: 31  ELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDVISFNILVTGLC 90

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
           +   +    +    M  +   PNV  + +L++  CK  R+++A +LL  M   G S  V 
Sbjct: 91  RAGKIETALEFFRKMDDR-CSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVI 149

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
            +T+L+DG  +  ++  A  +  +M+  GC PN+VTY SL+ G   A+  S A + +  +
Sbjct: 150 TYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDM 209

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
              G  P++V +  LID L K+G   DA                   C++L+ +   G  
Sbjct: 210 TCRGCTPNVVTYGTLIDGLCKVGRVKDA-------------------CAMLADMIDKGG- 249

Query: 377 SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
                         DL++YN L++  CKA   ++++ L    +  G  PD  ++  ++ G
Sbjct: 250 ------------TPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYG 297

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
           LC + ++DEA  +   +       +  +++ ++D L +AG+  +A  L+     +    D
Sbjct: 298 LCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDAD 357

Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
           VV+Y+  I GL + GR +EA++L ++M  +  PP+  TY  ++   C   ++     L++
Sbjct: 358 VVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVE 417

Query: 557 DVIDARIELDYHTSIRLTKFIFKFHS-SSSAVNQLVEMCNLGLIPDEM 603
           ++  +       T   L   + +     S+A++   EM + G+IPD +
Sbjct: 418 EMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHI 465



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 110/418 (26%), Positives = 207/418 (49%), Gaps = 10/418 (2%)

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQ---LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
           NI++  L + G+++  ++  ++      PN +++++ +  LCK N VS   +++  M  +
Sbjct: 83  NILVTGLCRAGKIETALEFFRKMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKAR 142

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           G  P+V  + IL++  CK  ++A A+++L  M+  G   ++  +  L+ G  R RR+  A
Sbjct: 143 GCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDA 202

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             L   M   GC+PNVVTY +LI G  +      A + L  +  +G  PDL+ +N+LI+ 
Sbjct: 203 LALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLING 262

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---D 391
           L K    D+++ +    +   + PD  T+ S++  +C S R     +L+  ++      D
Sbjct: 263 LCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPD 322

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
           +++Y+ L+   CKAG  ++A  LY  M   G   D  ++  L+ GLC A ++DEA  +  
Sbjct: 323 VILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLA 382

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
            +V      +   + +++  L +     +AI+L             V+Y + I G+    
Sbjct: 383 RMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRME 442

Query: 512 RTEEAYILYSQ-MKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
           R + A + Y Q M    V P+  TY ++L    K +++  ++ L   V+D  ++L Y 
Sbjct: 443 RVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHL---VLDQMVQLGYR 497



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 144/310 (46%), Gaps = 7/310 (2%)

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           G   +V  +  LIDG  +    D A  L+E M    CSP++VTY +L+ G         A
Sbjct: 5   GCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERA 64

Query: 310 FS-FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
            + F +ML+   H  D++  N+L+  L + G  + AL+ +   ++ +  P+  T+  L+ 
Sbjct: 65  MALFQEMLDRRSH--DVISFNILVTGLCRAGKIETALEFFRK-MDDRCSPNVITYSVLID 121

Query: 369 TVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
            +C + R S   +L+  ++      D++ Y  L+   CK      A ++   MLD G  P
Sbjct: 122 GLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVP 181

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           +  ++  LL GLC AR++ +A+ + + +       N   +  ++D L + GR   A  + 
Sbjct: 182 NLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAML 241

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
              I +    D++ Y + I GL +  + +E+  L  +     + P+  TY  ++   C+ 
Sbjct: 242 ADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRS 301

Query: 546 RNIKMVKRLL 555
             +    RLL
Sbjct: 302 NRLDEACRLL 311



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 89/356 (25%), Positives = 153/356 (42%), Gaps = 39/356 (10%)

Query: 94  TRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPN 153
           +++   +E +R    E+   GCV    T+   L    R       L    +M   G TPN
Sbjct: 162 SKVAAAWEVLR----EMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPN 217

Query: 154 TFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
                 ++D L K+GRV     +L +                               M+ 
Sbjct: 218 VVTYGTLIDGLCKVGRVKDACAMLAD-------------------------------MID 246

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           KG  P++ ++ +L+N  CK  ++ E+  LL   ++ G    V  ++ +I G  R  RLD 
Sbjct: 247 KGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDE 306

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L   +   GC P+V+ Y++LI G  +A     AF   +++  +G   D+V ++ LID
Sbjct: 307 ACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLID 366

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEA 390
            L K G  D+A  +   ++ +   P + T+ SL+  +C         +LV  +E      
Sbjct: 367 GLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAP 426

Query: 391 DLVVYNALLSYFCK-AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
             V YN L+   C+     + A+  +  M+D G  PD+ ++  LL GL  ++ + E
Sbjct: 427 SAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHE 482



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 82/318 (25%), Positives = 148/318 (46%), Gaps = 10/318 (3%)

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           M  +GC PNVVTY SLI G  +      A    + ++S   +P +V +N L+D L + G 
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE--VEADLVVYNAL 398
            + A+ ++  +L+ +   D  +F  L++ +C +G+     +    ++     +++ Y+ L
Sbjct: 61  LERAMALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFRKMDDRCSPNVITYSVL 119

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           +   CKA   +QAV+L  +M  +G +PD  ++  L+ GLC   K+  A  V + ++    
Sbjct: 120 IDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGC 179

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
             N   + +++  L  A R   A+ L R         +VV+Y   I GL + GR ++A  
Sbjct: 180 VPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACA 239

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
           + + M      P+   Y +++   CK   +     LL+  +   I+ D  T    +  I+
Sbjct: 240 MLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVT---YSSVIY 296

Query: 579 KFHSSSSAVNQLVEMCNL 596
               S    N+L E C L
Sbjct: 297 GLCRS----NRLDEACRL 310


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/439 (25%), Positives = 221/439 (50%), Gaps = 7/439 (1%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALC 193
            ++ F EM +    P+    + ++  + K+ + DL I   ++ ++     N  ++NI + 
Sbjct: 49  AVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMIN 108

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
            LC+ + +S    ++G M++ G+ P++     LLN FC   RI+EA  L+  M+ +G   
Sbjct: 109 CLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP 168

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
               +T L+ G  +  +   A  L E+MV  GC P++VTY ++I G  +     +A + L
Sbjct: 169 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 228

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           + +E      D+V ++ +ID L K    DDAL+++  +    + PD +T+ SL+S +C  
Sbjct: 229 NKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 288

Query: 374 GRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           GR+S   +L+  +   ++  ++V +N+L+  F K G   +A KL++ M+ +   P+  ++
Sbjct: 289 GRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTY 348

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             L+ G C   ++DEA  ++  +V  +   +   +  +++   +A +    ++LFR    
Sbjct: 349 NSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSR 408

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
                + V+YT  I G  +    + A +++ QM    V PN  TY  +L   CK   ++ 
Sbjct: 409 RGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEK 468

Query: 551 VKRLLQDVIDARIELDYHT 569
              + + +  +++E D +T
Sbjct: 469 AMVVFEYLQKSKMEPDIYT 487



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 116/488 (23%), Positives = 220/488 (45%), Gaps = 11/488 (2%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
           A+  F    K R  F  +  F  ++S + ++  +F+ V     ++  +G      T+ + 
Sbjct: 49  AVDLFGEMVKSRP-FPSIVEFSKLLSAIAKMK-KFDLVISFGEKMEILGVSHNLYTYNIM 106

Query: 126 LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET----Q 181
           +    R       L    +M + G+ P+    N +++      R+   + ++ +      
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
            P+ ++F   +  L + N  S    ++  MV KG  P++  +  ++N  CK G    A  
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 226

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           LL  M        V  ++ +ID   + R +D A  L+ +M   G  P+V TY+SLI    
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286

Query: 302 EAKMFSIAFSFL-DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
               +S A   L DMLE + + P++V  N LID  +K G   +A  ++D +++  + P+ 
Sbjct: 287 NYGRWSDASRLLSDMLERKIN-PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345

Query: 361 YTFCSLLSTVCLSGRFSLLPK---LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
            T+ SL++  C+  R     +   L+   +   D+V YN L++ FCKA      ++L+  
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRD 405

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           M  +G   +  ++  L+ G   A   D A  V++ +V +    N   +  ++D L + G+
Sbjct: 406 MSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 465

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
             KA+ +F      K   D+ +Y +   G+ + G+ E+ + L+  +    V P+   Y  
Sbjct: 466 LEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNT 525

Query: 538 MLLSFCKE 545
           M+  FCK+
Sbjct: 526 MISGFCKK 533



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 152/306 (49%), Gaps = 7/306 (2%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK---ETQL-PNFLSFNIALC 193
            L  F EM   G  P+ F  + ++  L   GR     ++L    E ++ PN ++FN  + 
Sbjct: 259 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLID 318

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
              K   +   + +   M+++   PN+  +  L+N FC   R+ EA Q+  LM++     
Sbjct: 319 AFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLP 378

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
            V  +  LI+GF + +++     L+  M + G   N VTYT+LI GF +A     A    
Sbjct: 379 DVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVF 438

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
             + S+G  P+++ +N L+D L K G  + A+ V++ L + K+ PD YT+  +   +C +
Sbjct: 439 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKA 498

Query: 374 GRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           G+      L C L    V+ D++ YN ++S FCK G   +A  L+  M + G  PD+ ++
Sbjct: 499 GKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTY 558

Query: 431 VGLLRG 436
             L+R 
Sbjct: 559 NTLIRA 564



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 99/427 (23%), Positives = 185/427 (43%), Gaps = 25/427 (5%)

Query: 103 VRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMD 162
           V+G   +L   G VI          +  RGE   + L   ++M +     +    + V+D
Sbjct: 198 VKGCQPDLVTYGAVING--------LCKRGEP-DLALNLLNKMEKGKIEADVVIYSTVID 248

Query: 163 VLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYP 218
            L K   VD  + +  E       P+  +++  +  LC     S+   ++  M+ +   P
Sbjct: 249 SLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINP 308

Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
           NV  F  L++ F K G++ EA +L   MI      ++  +  LI+GF    RLD A  ++
Sbjct: 309 NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF 368

Query: 279 EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
             MV   C P+VVTY +LI GF +AK           +   G   + V +  LI    + 
Sbjct: 369 TLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQA 428

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-------FSLLPKLVCGLEVEAD 391
              D+A  V+  ++   + P+  T+ +LL  +C +G+       F  L K     ++E D
Sbjct: 429 SDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS----KMEPD 484

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
           +  YN +    CKAG       L+ ++  KG  PD  ++  ++ G C     +EA  ++ 
Sbjct: 485 IYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFI 544

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
            +  + P  ++  +  ++   +  G    + +L +     ++  D  +Y + +  +L  G
Sbjct: 545 KMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGL-VTDMLHDG 603

Query: 512 RTEEAYI 518
           R ++ ++
Sbjct: 604 RLDKGFL 610



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/314 (25%), Positives = 146/314 (46%), Gaps = 7/314 (2%)

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
           ++ EA  L G M+      S+  ++ L+    ++++ D+     EKM   G S N+ TY 
Sbjct: 45  KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
            +I         S A + L  +   G+ P +V  N L++         +A+ + D ++E+
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164

Query: 355 KLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV---EADLVVYNALLSYFCKAGFPNQA 411
              PD+ TF +L+  +    + S    LV  + V   + DLV Y A+++  CK G P+ A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224

Query: 412 VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV--HTAIV 469
           + L N M       D   +  ++  LC  R +D+A+N++    M+N  +   V  +++++
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTE--MDNKGIRPDVFTYSSLI 282

Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
             L   GR   A +L    +  K   +VV++   I    + G+  EA  L+ +M   ++ 
Sbjct: 283 SCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 342

Query: 530 PNAYTYRVMLLSFC 543
           PN  TY  ++  FC
Sbjct: 343 PNIVTYNSLINGFC 356



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/313 (25%), Positives = 146/313 (46%), Gaps = 11/313 (3%)

Query: 263 DGFR-RLRR-------LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           DG+R +L R       LD A  L+ +MV++   P++V ++ L+    + K F +  SF +
Sbjct: 30  DGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGE 89

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            +E  G + +L  +N++I+CL +      AL +   +++L   P   T  SLL+  C   
Sbjct: 90  KMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGN 149

Query: 375 RFSLLPKLV---CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
           R S    LV     +  + D V +  L+    +    ++AV L   M+ KG  PD  ++ 
Sbjct: 150 RISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYG 209

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            ++ GLC   + D A+N+   +       +  +++ ++D L +      A+ LF     +
Sbjct: 210 AVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNK 269

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
               DV +Y+  I  L   GR  +A  L S M    + PN  T+  ++ +F KE  +   
Sbjct: 270 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEA 329

Query: 552 KRLLQDVIDARIE 564
           ++L  ++I   I+
Sbjct: 330 EKLFDEMIQRSID 342



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/263 (22%), Positives = 116/263 (44%), Gaps = 3/263 (1%)

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNAL 398
           D+A+D++  +++ +  P    F  LLS +    +F L+      +E   V  +L  YN +
Sbjct: 47  DEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIM 106

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           ++  C+    + A+ +   M+  G+ P   +   LL G C   +I EA+ +   +V    
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
             +    T +V  L +  +  +A+ L  R +V+    D+V+Y   I GL + G  + A  
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 226

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
           L ++M+   +  +   Y  ++ S CK R++     L  ++ +  I  D  T   L   + 
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286

Query: 579 KFHSSSSAVNQLVEMCNLGLIPD 601
            +   S A   L +M    + P+
Sbjct: 287 NYGRWSDASRLLSDMLERKINPN 309



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/260 (21%), Positives = 106/260 (40%), Gaps = 11/260 (4%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           R +  + I   +    C+    T+   +  + + +     +E F +M R G   NT    
Sbjct: 360 RLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYT 419

Query: 159 IVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
            ++   F+    D    V K+       PN +++N  L  LCK   +     V   + + 
Sbjct: 420 TLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS 479

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
              P++  + I+    CK G++ + + L   +   G    V A+  +I GF +    + A
Sbjct: 480 KMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEA 539

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             L+ KM ++G  P+  TY +LI+  +     + +   +  + S   A D   + ++ D 
Sbjct: 540 YTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDM 599

Query: 335 LSKMGSYDDALDVYDGLLEL 354
           L     +D  LD   G LE+
Sbjct: 600 L-----HDGRLD--KGFLEV 612


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 130/517 (25%), Positives = 244/517 (47%), Gaps = 14/517 (2%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
            G+ E    I+ E+   G    +QT+ L +  + RG+      E  DEM +    P    
Sbjct: 368 AGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLT 427

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            +++++ L + G +     +L+E  +    PN + +   +    K   V   + ++  M 
Sbjct: 428 YSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMR 487

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
            +G  P+V  +  L+  FCK  R+ EA   L  M+      + + +   IDG+ +   ++
Sbjct: 488 EQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEME 547

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
           +A   + +M+  G  PNV  YT+LI+G  +    + AFS    + S     D+  ++VLI
Sbjct: 548 IADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLI 607

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG---RFSLLPKLVCGLEVE 389
             LS+ G   +A  ++  L E  L+P+++T+ SL+S  C  G   + S L + +C   + 
Sbjct: 608 HGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGIN 667

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            D+V YN L+   CKAG   +A  L++ +  +G TP+  ++  ++ G C ++    A  +
Sbjct: 668 PDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQL 727

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
            + +++     +A ++  I++   +  +  KA+ LF+  ++EK     VS+   I G  +
Sbjct: 728 LEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQE-MLEKGFASTVSFNTLIEGYCK 786

Query: 510 GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
            G+ +EA  L  +M      PN  TY  ++   CK   +   KRL  ++ +  +     T
Sbjct: 787 SGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNV---MPT 843

Query: 570 SIRLTKFIFKFHS--SSSAVNQLV-EMCNLGLIPDEM 603
           +   T  +  +H+  + S V+ L  EM   G+ PD+M
Sbjct: 844 AKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKM 880



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 104/465 (22%), Positives = 223/465 (47%), Gaps = 7/465 (1%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCKLN 199
           EMG  G +PN    N+++  L +   +D  I++    + +  +P+  +++I +   C   
Sbjct: 240 EMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEK 299

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
                K ++  M+  G  P    +  L++ F + G I +A+++   M+  G   ++  W 
Sbjct: 300 RSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWN 359

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
            L++G  +  +++ A  + ++M++ G  P+  TY+ LI+G    +  + AF  LD ++  
Sbjct: 360 TLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKR 419

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
             AP ++ ++V+I+ L + G+      +   ++   L P++  + +L++     GR    
Sbjct: 420 KLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEES 479

Query: 380 PKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
             ++  +  +    D+  YN+L+  FCKA    +A      ML++   P+ +++   + G
Sbjct: 480 RMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDG 539

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
              A +++ A   +  ++      N  ++TA+++   + G   +A  +FR  +  +   D
Sbjct: 540 YSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQD 599

Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
           V +Y+V I GL   G+  EA+ ++S+++   + PNA+TY  ++   CK+ N+    +LL+
Sbjct: 600 VQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLE 659

Query: 557 DVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           ++    I  D  T   L   + K      A N   ++   GL P+
Sbjct: 660 EMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPN 704



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/470 (23%), Positives = 208/470 (44%), Gaps = 15/470 (3%)

Query: 137 MVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIAL 192
           M+LE  D     G  P     N ++D   + G ++   ++  E        N + +N  L
Sbjct: 307 MLLEMID----VGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLL 362

Query: 193 CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
             +CK   +    +++  M+ KG  P+ + + +L+   C+   +A A++LL  M     +
Sbjct: 363 NGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLA 422

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
            +V  ++V+I+G  R   L     +  +MV NG  PN V YT+L+    +      +   
Sbjct: 423 PTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMI 482

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
           L+ +  +G  PD+  +N LI    K    ++A      +LE +L P+++T+ + +     
Sbjct: 483 LERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSK 542

Query: 373 SGRFSLLPK-----LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           +G   +  +     L CG  V  ++ +Y AL+   CK G   +A  ++  +L +    D 
Sbjct: 543 AGEMEIADRYFNEMLSCG--VLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDV 600

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
            ++  L+ GL    K+ EA  ++  +       NA  + +++    + G   KA QL   
Sbjct: 601 QTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEE 660

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN 547
             ++    D+V+Y + I GL + G  E A  L+  ++   + PN  TY  M+  +CK +N
Sbjct: 661 MCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKN 720

Query: 548 IKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLG 597
                +LL++++   +  D      +  F  K      A++   EM   G
Sbjct: 721 PTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG 770



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 110/456 (24%), Positives = 204/456 (44%), Gaps = 38/456 (8%)

Query: 151 TPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKD 206
           +PN+   +++MD   K+G +   + V    +     P+ LS N  L +L K N V     
Sbjct: 142 SPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWK 201

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
           V   M      P+V  +  +++  CK+G + +A ++L  M   G S ++  + V+I G  
Sbjct: 202 VFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLC 261

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF-MEAKMFSIAFSFLDMLESEGHAPDL 325
           R R LD A  L   MV  G  P++ TY  LI GF ME +        L+M++  G  P+ 
Sbjct: 262 RARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDV-GLKPEP 320

Query: 326 VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCG 385
           + +N LID   + G  + A  + D ++                               CG
Sbjct: 321 ITYNALIDGFMRQGDIEQAFRIKDEMV------------------------------ACG 350

Query: 386 LEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
             +EA+L+++N LL+  CKAG   +A+++   M++KG  PD+ ++  L+ G C  + +  
Sbjct: 351 --IEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMAR 408

Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
           A  +   +     A     ++ I++ L   G       + R  ++     + V YT  + 
Sbjct: 409 AFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMT 468

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
              + GR EE+ ++  +M+   + P+ + Y  +++ FCK + ++  +  L ++++ R+  
Sbjct: 469 AHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRP 528

Query: 566 DYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           + HT         K      A     EM + G++P+
Sbjct: 529 NAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPN 564



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 102/470 (21%), Positives = 197/470 (41%), Gaps = 46/470 (9%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           R E  R  + E+        A T+  F+  Y +     +    F+EM   G  PN     
Sbjct: 510 RMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYT 569

Query: 159 IVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
            +++   K G V     V    L    L +  ++++ +  L +   +     +   +  K
Sbjct: 570 ALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEK 629

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           G  PN   +  L++  CK G + +A QLL  M   G +  +  + +LIDG  +   ++ A
Sbjct: 630 GLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERA 689

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             L++ +   G +PN VTY +++ G+ ++K  + AF  L+ +   G  PD   +NV+++ 
Sbjct: 690 KNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNF 749

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLVCGLEVEA 390
             K   ++ ALD++  +LE K    + +F +L+   C SG+      LL +++   +   
Sbjct: 750 CCKEEKFEKALDLFQEMLE-KGFASTVSFNTLIEGYCKSGKLQEANHLLEEMI-EKQFIP 807

Query: 391 DLVVYNALLSYFCKAGFPNQAVKL-----------------------------------Y 415
           + V Y +L+ + CKAG   +A +L                                   +
Sbjct: 808 NHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALF 867

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
             M+ KG  PD  ++  ++   C    + EA  +   I++    ++   + A++  L + 
Sbjct: 868 EEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKK 927

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL-LEGGRTEEAYILYSQMK 524
               + ++L        + L + + +V  RG  + G   E A +L S +K
Sbjct: 928 EEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVK 977



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/241 (20%), Positives = 105/241 (43%), Gaps = 5/241 (2%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFL 186
           + E +   L+ F EM   GF  +T + N +++   K G++     +L+E      +PN +
Sbjct: 752 KEEKFEKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHV 810

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           ++   + + CK   +   K +   M  +   P  + +  LL+ +  +G ++E   L   M
Sbjct: 811 TYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEM 870

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
           +  G       + V+ID + R   +  A  L ++++  G   +V  Y +LI+   + + F
Sbjct: 871 VAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEF 930

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
                 L+ +   G    L   +V+       G+ D+A +V   +++   V ++ +   L
Sbjct: 931 FEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDL 990

Query: 367 L 367
           +
Sbjct: 991 V 991


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 117/513 (22%), Positives = 239/513 (46%), Gaps = 17/513 (3%)

Query: 49  APHIVHSTLL---NCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTG--RFETV 103
           A   VH +L+   N  +   + SFF W    R  F    S+D+   +        + +  
Sbjct: 11  AKRFVHRSLVVRGNVATVSPSFSFF-W----RRAFSGKTSYDYREKLSRNGLSELKLDDA 65

Query: 104 RGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDV 163
             + GE+ +         F   L    +   + +V+   ++M   G   N +  +I+++ 
Sbjct: 66  VALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINC 125

Query: 164 LFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN 219
             +  ++ L +    K++K    PN ++ +  L   C    +S    ++  M   G+ PN
Sbjct: 126 FCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPN 185

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
              F  L++      + +EA  L+  M+  G    +  + V+++G  +    D+A  L  
Sbjct: 186 TVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLN 245

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
           KM Q    P V+ YT++I G  + K    A +    +E++G  P++V ++ LI CL   G
Sbjct: 246 KMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYG 305

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYN 396
            + DA  +   ++E K+ PD +TF +L+      G+     KL   +    ++  +V Y+
Sbjct: 306 RWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYS 365

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
           +L++ FC     ++A +++  M+ K   PD  S+  L++G C A+++DE + +++ +   
Sbjct: 366 SLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQR 425

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
               N   +T ++  L +AG C  A ++F+  + +  P ++++Y   + GL + G+ E+A
Sbjct: 426 GLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 485

Query: 517 YILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
            +++  ++   + P  YTY +M+   CK   ++
Sbjct: 486 MVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/501 (23%), Positives = 235/501 (46%), Gaps = 11/501 (2%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
           A++ F    K R  F  +  F  ++S + ++  +F+ V  +  ++  +G      T+ + 
Sbjct: 65  AVALFGEMVKSRP-FPSIIEFSKLLSAIAKMN-KFDVVISLGEQMQNLGMPHNHYTYSIL 122

Query: 126 LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL--- 182
           +  + R     + L    +M + G+ PN    + +++      R+   + ++ +  +   
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182

Query: 183 -PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
            PN ++FN  +  L   N  S    +I  MV KG  P++  + +++N  CK G    A+ 
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFI 242

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           LL  M        V  +T +IDG  + + +D A  L+++M   G  PNVVTY+SLI    
Sbjct: 243 LLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302

Query: 302 EAKMFSIAFSFL-DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
               +S A   L DM+E + + PD+   + LID   K G   +A  +YD +++  + P  
Sbjct: 303 NYGRWSDASRLLSDMIERKIN-PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361

Query: 361 YTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
            T+ SL++  C+  R     ++   +       D+V Y+ L+  FCKA   ++ ++L+  
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFRE 421

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           M  +G   +  ++  L++GL  A   D A  +++ +V +    N   +  ++D L + G+
Sbjct: 422 MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 481

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
             KA+ +F      K    + +Y + I G+ + G+ E+ + L+  +    V P+   Y  
Sbjct: 482 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNT 541

Query: 538 MLLSFCKERNIKMVKRLLQDV 558
           M+  FC++ + +    L +++
Sbjct: 542 MISGFCRKGSKEEADALFKEM 562



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 151/306 (49%), Gaps = 7/306 (2%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK---ETQL-PNFLSFNIALC 193
            L  F EM   G  PN    + ++  L   GR     ++L    E ++ P+  +F+  + 
Sbjct: 275 ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALID 334

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
              K   +   + +   MV++   P++  +  L+N FC   R+ EA Q+   M++     
Sbjct: 335 AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP 394

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
            V +++ LI GF + +R+D    L+ +M Q G   N VTYT+LI+G  +A    +A    
Sbjct: 395 DVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIF 454

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
             + S+G  P+++ +N L+D L K G  + A+ V++ L   K+ P  YT+  ++  +C +
Sbjct: 455 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 514

Query: 374 GRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           G+      L C L    V+ D+V YN ++S FC+ G   +A  L+  M + G  P++  +
Sbjct: 515 GKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCY 574

Query: 431 VGLLRG 436
             L+R 
Sbjct: 575 NTLIRA 580



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 97/429 (22%), Positives = 188/429 (43%), Gaps = 32/429 (7%)

Query: 175 KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
           +++K    P+ + F+  L  + K+N    V  +   M   G   N   + IL+NCFC+  
Sbjct: 71  EMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRS 130

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
           ++  A  +LG M+ LG   ++   + L++G+   +R+  A  L ++M   G  PN VT+ 
Sbjct: 131 QLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFN 190

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
           +LI G       S A + +D + ++G  PDLV + V+++ L K G  D A          
Sbjct: 191 TLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA---------- 240

Query: 355 KLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKL 414
                                F LL K+  G ++E  +++Y  ++   CK    + A+ L
Sbjct: 241 ---------------------FILLNKMEQG-KLEPGVLIYTTIIDGLCKNKHMDDALNL 278

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
           +  M  KG  P+  ++  L+  LC   +  +A  +   ++      +    +A++D  ++
Sbjct: 279 FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 338

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
            G+  +A +L+   +       +V+Y+  I G     R +EA  ++  M      P+  +
Sbjct: 339 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVS 398

Query: 535 YRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMC 594
           Y  ++  FCK + +     L +++    +  +  T   L + +F+      A     EM 
Sbjct: 399 YSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMV 458

Query: 595 NLGLIPDEM 603
           + G+ P+ M
Sbjct: 459 SDGVPPNIM 467



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 92/393 (23%), Positives = 166/393 (42%), Gaps = 32/393 (8%)

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
           + G MV+   +P++  F  LL+   KM +      L   M  LG   +   +++LI+ F 
Sbjct: 68  LFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFC 127

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
           R  +L +A  +  KM++ G  PN+VT +SL+ G+  +K  S A + +D +   G+ P+ V
Sbjct: 128 RRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTV 187

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL 386
             N LI  L       +A+ + D ++     PD                           
Sbjct: 188 TFNTLIHGLFLHNKASEAVALIDRMVAKGCQPD--------------------------- 220

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
                LV Y  +++  CK G  + A  L N M      P    +  ++ GLC  + +D+A
Sbjct: 221 -----LVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDA 275

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
           +N+++ +       N   +++++  L   GR   A +L    I  K   DV +++  I  
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 335

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
            ++ G+  EA  LY +M   ++ P+  TY  ++  FC    +   K++ + ++      D
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395

Query: 567 YHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLI 599
             +   L K   K       +    EM   GL+
Sbjct: 396 VVSYSTLIKGFCKAKRVDEGMELFREMSQRGLV 428



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/263 (21%), Positives = 118/263 (44%), Gaps = 3/263 (1%)

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL---LPKLVCGLEVEADLVVYNAL 398
           DDA+ ++  +++ +  P    F  LLS +    +F +   L + +  L +  +   Y+ L
Sbjct: 63  DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSIL 122

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           ++ FC+      A+ +   M+  G+ P+  +   LL G C +++I EA+ +   + +   
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
             N      ++  L    +  +A+ L  R + +    D+V+Y V + GL + G T+ A+I
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFI 242

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
           L ++M+   + P    Y  ++   CK +++     L +++    I  +  T   L   + 
Sbjct: 243 LLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302

Query: 579 KFHSSSSAVNQLVEMCNLGLIPD 601
            +   S A   L +M    + PD
Sbjct: 303 NYGRWSDASRLLSDMIERKINPD 325



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 4/190 (2%)

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCN 194
           +E F EM + G   NT     ++  LF+ G  D+  ++ KE       PN +++N  L  
Sbjct: 416 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 475

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           LCK   +     V   + R    P +  + I++   CK G++ + + L   +   G    
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 535

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           V A+  +I GF R    + A  L+++M ++G  PN   Y +LI+  +       +   + 
Sbjct: 536 VVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIK 595

Query: 315 MLESEGHAPD 324
            + S G A D
Sbjct: 596 EMRSCGFAGD 605



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 44/229 (19%), Positives = 101/229 (44%), Gaps = 5/229 (2%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDV 207
           P+  + + ++    K  RVD G+++ +E      + N +++   +  L +  D    +++
Sbjct: 394 PDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEI 453

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
              MV  G  PN+  +  LL+  CK G++ +A  +   +       ++  + ++I+G  +
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 513

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
             +++    L+  +   G  P+VV Y ++I GF        A +    ++ +G  P+   
Sbjct: 514 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGC 573

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
           +N LI    + G  + + ++   +       D+ T   L++ +   GR 
Sbjct: 574 YNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNMLHDGRL 621


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 127/551 (23%), Positives = 260/551 (47%), Gaps = 25/551 (4%)

Query: 32  SSPKVCATTHQDFPIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMIS 91
           +SP   A +  D  ++        +L +   D  AL  F   +K+ ++  +   ++ ++ 
Sbjct: 39  ASPNSAALSSSDVKLL-------DSLRSQADDSAALRLFNLASKKPNFSPEPALYEEILL 91

Query: 92  VVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEM-GRFGF 150
            + R +G F+ +R I+ ++   GC +    FL+ +  Y + E+   +L     M   FG 
Sbjct: 92  RLGR-SGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQDEILGVVHWMIDDFGL 150

Query: 151 TPNTFARNIVMDVLF--------KIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVS 202
            P+T   N ++++L         +I    + +  +K    P+  +FN+ +  LC+ + + 
Sbjct: 151 KPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIK----PDVSTFNVLIKALCRAHQLR 206

Query: 203 NVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLI 262
               ++  M   G  P+ + F  ++  + + G +  A ++   M+  G S S  +  V++
Sbjct: 207 PAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIV 266

Query: 263 DGFRRLRRL-DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH 321
            GF +  R+ D   ++ E   Q+G  P+  T+ +L+ G  +A     A   +D++  EG+
Sbjct: 267 HGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGY 326

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF---SL 378
            PD+  +N +I  L K+G   +A++  D ++     P++ T+ +L+ST+C   +    + 
Sbjct: 327 DPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE 386

Query: 379 LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
           L +++    +  D+  +N+L+   C       A++L+  M  KG  PD +++  L+  LC
Sbjct: 387 LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLC 446

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
              K+DEA+N+ + + ++  A +   +  ++D   +A +  +A ++F    V     + V
Sbjct: 447 SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSV 506

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           +Y   I GL +  R E+A  L  QM      P+ +TY  +L  FC+  +IK    ++Q +
Sbjct: 507 TYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAM 566

Query: 559 IDARIELDYHT 569
                E D  T
Sbjct: 567 TSNGCEPDIVT 577



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 116/498 (23%), Positives = 228/498 (45%), Gaps = 24/498 (4%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET 180
           TF + ++   R       +   ++M  +G  P+      +M    + G +D  +++ +  
Sbjct: 191 TFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIRE-- 248

Query: 181 QLPNF------LSFNIALCNLCKLNDVSNVKDVIGMMVRK-GFYPNVRMFEILLNCFCKM 233
           Q+  F      +S N+ +   CK   V +  + I  M  + GF+P+   F  L+N  CK 
Sbjct: 249 QMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKA 308

Query: 234 GRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTY 293
           G +  A +++ +M+  G    V  +  +I G  +L  +  A    ++M+   CSPN VTY
Sbjct: 309 GHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTY 368

Query: 294 TSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE 353
            +LI    +      A     +L S+G  PD+   N LI  L    ++  A+++++ +  
Sbjct: 369 NTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRS 428

Query: 354 LKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQ 410
               PD +T+  L+ ++C  G+      ++  +E+      ++ YN L+  FCKA    +
Sbjct: 429 KGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIRE 488

Query: 411 AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
           A ++++ M   G + ++ ++  L+ GLC +R++++A  +   ++M     +   + +++ 
Sbjct: 489 AEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLT 548

Query: 471 RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYS--QMKHIAV 528
                G   KA  + +         D+V+Y   I GL + GR E A  L    QMK IA+
Sbjct: 549 HFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIAL 608

Query: 529 PPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSS---- 584
            P+AY   +  L F K +  + +  L +++++         S R+   +F+   +     
Sbjct: 609 TPHAYNPVIQGL-FRKRKTTEAIN-LFREMLEQNEAAPDAVSYRI---VFRGLCNGGGPI 663

Query: 585 -SAVNQLVEMCNLGLIPD 601
             AV+ LVE+   G +P+
Sbjct: 664 REAVDFLVELLEKGFVPE 681



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/396 (24%), Positives = 173/396 (43%), Gaps = 45/396 (11%)

Query: 98  GRFETVRGIVGELARVGCVIKAQ-TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           GR E     + E++        Q TF   +    +       +E  D M + G+ P+ + 
Sbjct: 273 GRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYT 332

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N V+  L K+G V   ++ L +       PN +++N  +  LCK N V    ++  ++ 
Sbjct: 333 YNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLT 392

Query: 213 RKGFYPNV--------------------RMFE---------------ILLNCFCKMGRIA 237
            KG  P+V                     +FE               +L++  C  G++ 
Sbjct: 393 SKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLD 452

Query: 238 EAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLI 297
           EA  +L  M   G + SV  +  LIDGF +  ++  A  ++++M  +G S N VTY +LI
Sbjct: 453 EALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLI 512

Query: 298 KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
            G  +++    A   +D +  EG  PD   +N L+    + G    A D+   +      
Sbjct: 513 DGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCE 572

Query: 358 PDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVV---YNALLSYFCKAGFPNQAVKL 414
           PD  T+ +L+S +C +GR  +  KL+  ++++   +    YN ++    +     +A+ L
Sbjct: 573 PDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINL 632

Query: 415 YNTMLDKG-FTPDNYSFVGLLRGLC-GARKIDEAIN 448
           +  ML++    PD  S+  + RGLC G   I EA++
Sbjct: 633 FREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVD 668


>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 148/582 (25%), Positives = 250/582 (42%), Gaps = 76/582 (13%)

Query: 41  HQDFPIILAP-HIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSF---DHMISV-VTR 95
           H   PI   P  +   T+ N P D   L  F+    +  +    ++F   +H+I +  T 
Sbjct: 32  HPHRPISPGPISLTKDTVSNAP-DRGQLENFLKSNCKSGHIKRSEAFSVFNHLIDMQPTP 90

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
               F T+ G V ++ R                      Y  V+  +  M   G  P+  
Sbjct: 91  PISSFNTLLGAVAKIKR----------------------YFDVISLYKRMSLIGLAPDFI 128

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKET----QLPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
             NI+++    + +VD G+ VL E       PN ++F   +  LC  + +S    ++  M
Sbjct: 129 TLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKM 188

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT----LGTSLSVN--AWTVLIDGF 265
           VR G+ PNV  +  LLN  C  G    A +L   M+      G ++  N   +  +ID  
Sbjct: 189 VRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSL 248

Query: 266 RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL 325
            +   +D    L+ +M   G SP+VV Y+S+I G      +  A    + +  EG  P++
Sbjct: 249 CKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNV 308

Query: 326 VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCG 385
           V  NVLID L K G  ++A  +   +++    PD++T+ +L+   CL GR      L   
Sbjct: 309 VTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVS 368

Query: 386 LE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK--------------------- 421
           +E   +E D V YN L++ +CK+G   +A KLY  M+ K                     
Sbjct: 369 MESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGK 428

Query: 422 --------------GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTA 467
                           TP++ ++  LL GLC    + EA+ ++  +  ++   +  +   
Sbjct: 429 VRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNC 488

Query: 468 IVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIA 527
           ++D L +A +   A +LF R   E    +V++YTV I GL + G+ E A  L+  M+   
Sbjct: 489 LIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKG 548

Query: 528 VPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
             PN  T+  ++  FC+   ++ V  LLQ++ +     D  T
Sbjct: 549 CAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDAST 590



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 112/464 (24%), Positives = 204/464 (43%), Gaps = 13/464 (2%)

Query: 105 GIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVL 164
            ++GE+ R G      TF   ++    G           +M R G+ PN      +++ L
Sbjct: 148 AVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGL 207

Query: 165 FKIGRVDLGIKVLKE----------TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
              G   L +K+ +E          T  PN + +   + +LCK   +   K++   M  +
Sbjct: 208 CMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGR 267

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           G  P+V  +  +++  C  GR   A  L   M+  G   +V  + VLID   +  +++ A
Sbjct: 268 GISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEA 327

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
            +L + M+Q G SP+  TY +LI GF        A      +ES+G   D V +NVLI+ 
Sbjct: 328 NHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLING 387

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE---AD 391
             K G   +A  +Y  ++  +++P   T+ +LL+ +   G+      L   ++V     +
Sbjct: 388 YCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPE 447

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
              YN LL   CK    ++A++L++ + +  F P    F  L+ GLC ARKI+ A  ++ 
Sbjct: 448 SCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFN 507

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
            +       N   +T ++  L ++G+   A  LF     +    ++V++   +RG  +  
Sbjct: 508 RLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQND 567

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
             ++   L  +M      P+A T  +++    K+   +    LL
Sbjct: 568 EMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLL 611



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 114/477 (23%), Positives = 217/477 (45%), Gaps = 20/477 (4%)

Query: 46  IILAPH-IVHSTLLNCPSDLIALSFFIWCAKQ---RDYFHDVQSFDHMISVVTRLTGRFE 101
           I LAP  I  + L+NC  +L  + F +    +   R +  +  +F  ++  +  L  R  
Sbjct: 121 IGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLC-LGSRIS 179

Query: 102 TVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEM----GRFGFT--PNTF 155
              G++ ++ R+G      T+   L          + ++  +EM    G FG T  PN  
Sbjct: 180 EATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLV 239

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
               ++D L K G +D G ++  E +     P+ ++++  +  +C        K +   M
Sbjct: 240 CYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEM 299

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
           V +G +PNV  F +L++  CK G++ EA  LL LMI  G S     +  LIDGF    R+
Sbjct: 300 VDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRI 359

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA-KMFSIAFSFLDMLESEGHAPDLVFHNV 330
           D A  L+  M   G   + V+Y  LI G+ ++ +M      + +M+  E   P ++ +N 
Sbjct: 360 DDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKE-IMPTVITYNT 418

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE--- 387
           L+  L + G   DA +++  +    L P+S T+  LL  +C +   S   +L   LE   
Sbjct: 419 LLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHD 478

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
            +  + ++N L+   CKA     A +L+N +  +G  P+  ++  ++ GLC + +++ A 
Sbjct: 479 FQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAK 538

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
           +++ G+     A N      ++    +     K ++L +    + +  D  + ++ +
Sbjct: 539 DLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVV 595



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 86/395 (21%), Positives = 173/395 (43%), Gaps = 11/395 (2%)

Query: 218 PNVRMFEILLNCFCKMGRI--AEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAG 275
           P+    E  L   CK G I  +EA+ +   +I +  +  ++++  L+    +++R     
Sbjct: 53  PDRGQLENFLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVI 112

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
            L+++M   G +P+ +T   LI  +          + L  +   GH+P+ V    L+  L
Sbjct: 113 SLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGL 172

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---------VCGL 386
                  +A  +   ++ +   P+  T+ +LL+ +C++G   L  KL           G+
Sbjct: 173 CLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGV 232

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
            ++ +LV Y  ++   CK G  ++  +L+  M  +G +PD  ++  ++ G+C   + + A
Sbjct: 233 TIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGA 292

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
             ++  +V      N      ++D L +AG+  +A  L +  I      D  +Y   I G
Sbjct: 293 KGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDG 352

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
               GR ++A  L+  M+   +  +A +Y V++  +CK   +   K+L ++++   I   
Sbjct: 353 FCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPT 412

Query: 567 YHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
             T   L   +F+      A N   EM    L P+
Sbjct: 413 VITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPE 447



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 129/277 (46%), Gaps = 11/277 (3%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
           QR    D  +++ +I     L GR +  R +   +   G    A ++ + +  Y +    
Sbjct: 336 QRGESPDTFTYNTLIDGFC-LEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKS--- 391

Query: 136 GMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSF 188
           G ++EA   + EM      P     N ++  LF+ G+V     +  E ++    P   ++
Sbjct: 392 GRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTY 451

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           NI L  LCK N +S   ++   +    F P++++F  L++  CK  +I  A +L   +  
Sbjct: 452 NILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSH 511

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
            G   +V  +TV+I G  +  +L+ A  L+  M + GC+PN+VT+ +L++GF +      
Sbjct: 512 EGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQK 571

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL 345
               L  +  +  +PD    ++++D LSK   Y + L
Sbjct: 572 VVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYL 608


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 129/486 (26%), Positives = 214/486 (44%), Gaps = 44/486 (9%)

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNI 190
           Y  VL    +M  FG  PN +  NI+++    + R+        K+LK    PN  +FN 
Sbjct: 75  YSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNT 134

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +  LC    +  V  +   M+ +GF PNV  +  L+N  CK+G  + A +LL  M    
Sbjct: 135 LIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGN 194

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF---------- 300
               V  +T +ID   + R++  A  L+ +M+  G SP++ TY SLI             
Sbjct: 195 CQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVT 254

Query: 301 --------------------------MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
                                      E K+   A   +DM+   G  P++V +N L+D 
Sbjct: 255 ALLNEMVNSKIMPNVVIFSTVVDALCKEGKVME-AHDVVDMMIKRGVEPNVVTYNALMDG 313

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEAD 391
                  D+A+ V+D ++     PD  ++ +L++  C   R      L + +C  E+  +
Sbjct: 314 HCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPN 373

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
            V Y+ L+   C  G    A+ L++ M+ +G  PD  S+  LL  LC  R++DEAI + +
Sbjct: 374 TVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLK 433

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
            I  +N   +  ++T ++D +  AG    A  LF     +    +V +YT+ I GL + G
Sbjct: 434 AIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQG 493

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSI 571
              EA  L+ +MK     PN  TY ++   F +        +LLQ+++      D  TS 
Sbjct: 494 LLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTST 553

Query: 572 RLTKFI 577
            L + +
Sbjct: 554 VLVEML 559



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 96/388 (24%), Positives = 189/388 (48%), Gaps = 5/388 (1%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+   F   L ++ K+   S V  +   M   G  PN+    IL+N FC + R+  A+ +
Sbjct: 57  PSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSV 116

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           L  ++ LG   ++  +  LI G     ++    +L++KM+  G  PNVVTY +LI G  +
Sbjct: 117 LAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCK 176

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
               S A   L  +E     PD+V +  +ID L K      A +++  ++   + P  +T
Sbjct: 177 VGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFT 236

Query: 363 FCSLLSTVCLSGRF----SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           + SL+  +C    +    +LL ++V   ++  ++V+++ ++   CK G   +A  + + M
Sbjct: 237 YNSLIHALCNLCEWKHVTALLNEMV-NSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMM 295

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
           + +G  P+  ++  L+ G C   ++DEA+ V+  +V    A +   ++ +++   +  R 
Sbjct: 296 IKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRI 355

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            KA+ LF     ++   + V+Y+  + GL   GR ++A  L+ +M      P+  +Y ++
Sbjct: 356 EKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCIL 415

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELD 566
           L   CK R +     LL+ +  + ++ D
Sbjct: 416 LDYLCKNRRLDEAIALLKAIEGSNMDPD 443



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/342 (24%), Positives = 161/342 (47%), Gaps = 7/342 (2%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           F EM   G +P+ F  N ++  L  +        +L E      +PN + F+  +  LCK
Sbjct: 222 FSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCK 281

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              V    DV+ MM+++G  PNV  +  L++  C    + EA ++   M+  G +  V +
Sbjct: 282 EGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVS 341

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           ++ LI+G+ +++R++ A YL+E+M +    PN VTY++L+ G         A +    + 
Sbjct: 342 YSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMV 401

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
           + G  PD V + +L+D L K    D+A+ +   +    + PD   +  ++  +C +G   
Sbjct: 402 TRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELE 461

Query: 378 LLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
               L   L    +  ++  Y  +++  C+ G   +A KL+  M  KG++P+  ++  + 
Sbjct: 462 AARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLIT 521

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
           RG     +    I + Q ++    + +    T +V+ L + G
Sbjct: 522 RGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDG 563



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 80/359 (22%), Positives = 153/359 (42%), Gaps = 3/359 (0%)

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           M+ +    S+  +T L+    +++       L  +M   G  PN+ T   LI  F   + 
Sbjct: 50  MLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQR 109

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
              AFS L  +   GH P++   N LI  L   G   + L ++D ++     P+  T+ +
Sbjct: 110 LGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGT 169

Query: 366 LLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
           L++ +C  G  S   +L+  +E    + D+VVY +++   CK     QA  L++ M+ +G
Sbjct: 170 LINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQG 229

Query: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI 482
            +P  +++  L+  LC   +      +   +V +    N  + + +VD L + G+  +A 
Sbjct: 230 ISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAH 289

Query: 483 QLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
            +    I      +VV+Y   + G       +EA  ++  M      P+  +Y  ++  +
Sbjct: 290 DVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGY 349

Query: 543 CKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           CK + I+    L +++    +  +  T   L   +        A+    EM   G IPD
Sbjct: 350 CKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPD 408



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 118/262 (45%), Gaps = 14/262 (5%)

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
           M S+   FL    +  H+  L F+ +           DDAL  ++ +L +   P    F 
Sbjct: 15  MLSLPPHFLSSSHNTFHSKSLNFNTL-----------DDALSSFNRMLHMHPPPSIADFT 63

Query: 365 SLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
            LL ++     +S +  L   ++   +  ++   N L++ FC       A  +   +L  
Sbjct: 64  KLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKL 123

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
           G  P+  +F  L+RGLC   KI E ++++  ++      N   +  +++ L + G    A
Sbjct: 124 GHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAA 183

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
           I+L R         DVV YT  I  L +  +  +A+ L+S+M H  + P+ +TY  ++ +
Sbjct: 184 IRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHA 243

Query: 542 FCKERNIKMVKRLLQDVIDARI 563
            C     K V  LL ++++++I
Sbjct: 244 LCNLCEWKHVTALLNEMVNSKI 265


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 134/576 (23%), Positives = 254/576 (44%), Gaps = 55/576 (9%)

Query: 104 RGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDV 163
           R    +  ++G V    TF + +  Y     +   +E  + MG++  +P+    N ++D 
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDA 252

Query: 164 LFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN 219
           L K GR+    DL + +     LPN  ++NI +   CK+  +    +VI +M +    P+
Sbjct: 253 LCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPD 312

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
           V  + +L+N  C  GRI EA++L   M  L     V ++  LI+G     ++  A  L E
Sbjct: 313 VWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLE 372

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
           +M + G  PN VT+  ++K + +      A + +  +E  G +PD V +N LI+   K G
Sbjct: 373 EMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAG 432

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL------------- 386
           +  +A    D +    +  DS T  ++L T+C   +     KL+                
Sbjct: 433 NMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYG 492

Query: 387 -------------------------EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
                                    E+    V YN ++   C+ G   QA+   N +L+ 
Sbjct: 493 TLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLES 552

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
           G  PD  ++  +L G C    +++A   +  +V N+   +      ++  L   G   KA
Sbjct: 553 GLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKA 612

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
           ++LF   + +   +D V+Y   I  L + GR ++A+ L S+M+   + P+ YTY  ++ +
Sbjct: 613 LKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITA 672

Query: 542 FCKERNIKMVKRLLQDVIDAR------IELDYHTSIRLTKFIFKFHSSSSAVNQLV-EMC 594
                 I+  +  +  +++        ++LD + ++  ++   +  SSS A ++ + E+C
Sbjct: 673 LTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELC 732

Query: 595 NLGLIPDEM-----WRKLGLLSDETMTPVSLFDGFV 625
             G   D M      ++ G+  D++ T ++L DG +
Sbjct: 733 TEGKYKDAMRIFGESKQKGITVDKS-TYINLMDGLI 767



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 98/386 (25%), Positives = 176/386 (45%), Gaps = 14/386 (3%)

Query: 183 PNFLSFNIALCNLCKL---NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEA 239
           PN L+ N  L +L +    + VS  ++     ++ G  PNV  F I++  +C   +  +A
Sbjct: 168 PNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDA 227

Query: 240 YQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG 299
            + L +M     S     +  ++D   +  RL  A  L   M   G  PN  TY  L+ G
Sbjct: 228 VEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYG 287

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
           + +      A + ++++      PD+  +N+LI+ L   G  ++A  + D +  LKL+PD
Sbjct: 288 YCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPD 347

Query: 360 SYTFCSLLSTVCL-----SGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKL 414
             ++ +L++  CL     S  F LL ++     V+ + V +N ++ ++CK G  + A   
Sbjct: 348 VVSYNTLING-CLEWSKISEAFKLLEEM-SEKGVKPNAVTHNIMVKWYCKEGKMDDASNT 405

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
              M + GF+PD  ++  L+ G C A  + EA      +   N  +++     I+  L  
Sbjct: 406 ITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCR 465

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
             +  +A +L   A    Y +D VSY   I G  + G  + A  L+ +MK   + P+  T
Sbjct: 466 EKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVT 525

Query: 535 YRVMLLSFCK----ERNIKMVKRLLQ 556
           Y  ++   C+    E+ I  +  LL+
Sbjct: 526 YNCIIGGLCQCGKTEQAISKLNELLE 551



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/375 (21%), Positives = 148/375 (39%), Gaps = 30/375 (8%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G+ +     + ++   G      T+   +  Y +    G      DEMGR     ++   
Sbjct: 397 GKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTL 456

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQLPNF----LSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N ++  L +  +++   K+L   +   +    +S+   +    K  +V     +   M  
Sbjct: 457 NTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKE 516

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           K   P+   +  ++   C+ G+  +A   L  ++  G       +  ++ G+ R   ++ 
Sbjct: 517 KEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEK 576

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A     KMV+N   P+V T   L++G     M   A    +   S+G A D V +N LI 
Sbjct: 577 AFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLIT 636

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF-------------SLLP 380
            L K G  DDA ++   + E +L PD YT+ ++++ +  SGR                LP
Sbjct: 637 SLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLP 696

Query: 381 KLVCGLEVEADLV-------------VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
             V  L+    +V              Y+  +   C  G    A++++     KG T D 
Sbjct: 697 XQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDK 756

Query: 428 YSFVGLLRGLCGARK 442
            +++ L+ GL   RK
Sbjct: 757 STYINLMDGLIKRRK 771


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 125/480 (26%), Positives = 228/480 (47%), Gaps = 13/480 (2%)

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIK----VLKETQLPNFLSFNI 190
           Y  V   +++M   G + +    NI+++ L  + R+  G      +L+    PN +++N 
Sbjct: 85  YSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNT 144

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +  LC  + +S    +   M + G  P+V  +  L+   C  G I  A +L   M+   
Sbjct: 145 LIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDI 204

Query: 251 TSLSVN------AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
           +   +N       + +++DG  ++ R D A  L+E+M   G  P++++Y SLI GF  A 
Sbjct: 205 SRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAG 264

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
            +  +   LD +  +G  PD+V  NVLID L K G   +A  +   ++E  +VPD  T+ 
Sbjct: 265 KWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYN 324

Query: 365 SLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
           SL+   C+ G  +   +L   +     E D++ YN L++ + K     +A+KLYN ML  
Sbjct: 325 SLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLV 384

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
           G  P+  ++  LL+G+  A K+D+A  ++  +  +  A N++ +   +D L +     +A
Sbjct: 385 GKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEA 444

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
           ++LF       + L++ +    I GL + G+ E A+ L+ ++ +    PN  TY +M+  
Sbjct: 445 MKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHG 504

Query: 542 FCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           FC+E  +     L+Q +       D  T   L +  ++ +     V  L  M    + PD
Sbjct: 505 FCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPD 564



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/400 (24%), Positives = 193/400 (48%), Gaps = 9/400 (2%)

Query: 176 VLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGR 235
           +++ T  P+  SFN  L  L K+   S V  +   M   G   +     ILLNC C + R
Sbjct: 60  MMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNR 119

Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
           + E +     ++  G S ++  +  LI G     R+  A  L+ +M + GC+P+VVTY +
Sbjct: 120 LREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGT 179

Query: 296 LIKGFMEAKMFSIAFSF-LDMLESEGH-----APDLVFHNVLIDCLSKMGSYDDALDVYD 349
           LIKG       +IA     +ML           P+++ +N+++D L K+G  D+A  +++
Sbjct: 180 LIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFE 239

Query: 350 GLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAG 406
            +    ++P   ++ SL+   C +G++    +L+  +    ++ D+V +N L+   CK G
Sbjct: 240 EMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEG 299

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
              +A KL   M++ G  PD  ++  L+ G C    ++ A  ++  +       +   + 
Sbjct: 300 KVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYN 359

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
            +++   +  +  +A++L+   ++     +V++Y   ++G+   G+ ++A  L+S MK  
Sbjct: 360 VLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAH 419

Query: 527 AVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
            +  N+YTY + L   CK   +    +L  ++  +  +L+
Sbjct: 420 GIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLE 459



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 107/451 (23%), Positives = 200/451 (44%), Gaps = 50/451 (11%)

Query: 86  FDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEM 145
            +H IS  TRL  R + + G   ++   G +IK       + I  +     +  E  +++
Sbjct: 151 MEHRISEATRLFLRMQKL-GCTPDVVTYGTLIKGLCGTGNINIALK-----LHQEMLNDI 204

Query: 146 GRFGFT--PNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLN 199
            R+     PN    NI++D L K+GR D   ++ +E +    +P+ +S+N  +   C   
Sbjct: 205 SRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAG 264

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
                K ++  M+ +G  P++  F +L++  CK G++ EA +LLG+MI  G    +  + 
Sbjct: 265 KWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYN 324

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
            LI+GF  +  L+ A  L+  M   GC P+V++Y  LI G+ +      A    + +   
Sbjct: 325 SLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLV 384

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL------- 372
           G  P+++ ++ L+  +   G  DDA  ++  +    +  +SYT+   L  +C        
Sbjct: 385 GKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEA 444

Query: 373 --------SGRFSL-LPKLVC---------GLEV-------------EADLVVYNALLSY 401
                   S  F L +  L C          LE              E ++V Y  ++  
Sbjct: 445 MKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHG 504

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVN 461
           FC+ G  ++A  L   M   G TPD  ++  L+RG   + K++E + +   +   + + +
Sbjct: 505 FCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPD 564

Query: 462 AHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           A   + +VD L +  +  + + L  R  ++K
Sbjct: 565 AITCSIVVDMLSKDEKYQECLHLLPRFPIQK 595



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/216 (22%), Positives = 92/216 (42%), Gaps = 11/216 (5%)

Query: 396 NALLSYF---CKAG--FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           N  +++F   CK G      A+  ++ M+    TP   SF  LL GL   +   +  ++Y
Sbjct: 33  NPQIAFFLRHCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLY 92

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
             + ++  + +      +++ L    R  +    F   +   Y  ++V+Y   I+GL   
Sbjct: 93  NQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCME 152

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID--ARIELDYH 568
            R  EA  L+ +M+ +   P+  TY  ++   C   NI +  +L Q++++  +R E++  
Sbjct: 153 HRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCK 212

Query: 569 TSIRLTKFIF----KFHSSSSAVNQLVEMCNLGLIP 600
            ++     I     K      A     EM   G+IP
Sbjct: 213 PNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIP 248


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 145/624 (23%), Positives = 269/624 (43%), Gaps = 55/624 (8%)

Query: 57  LLNCPSDL-IALSFFIWCAKQRDYFHDVQSFDHMISVVTRL--TGRFETVRGIVGELARV 113
           LL  P D+  ++  F     Q+ Y H   +FD    ++ +L   G F+ +  ++ ++   
Sbjct: 72  LLELPLDIPTSMELFQRAGAQKGYSH---TFDACYLLIDKLGAVGDFKVIEKLLKQMKDE 128

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEM-GRFGFTPNTFARNIVMDVLFK--IGRV 170
           G + K   F+L ++ Y +  + G       +M G +   P   + N+V+D+L      RV
Sbjct: 129 GLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGVYSCDPTFKSYNVVLDILVDGDCPRV 188

Query: 171 DLGI--KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLN 228
              +   +L     P   +F + +  LC +++V +   ++  M + G  PN  +++ L++
Sbjct: 189 APNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIH 248

Query: 229 CFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCS- 287
             C+  R++EA QLL  M  +     V  +  +I G  R  R+  A  L ++M+  G S 
Sbjct: 249 ALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFST 308

Query: 288 ------------------------------PNVVTYTSLIKGFMEAKMFSIAFSFL-DML 316
                                         PN V Y +LI G++ +  F  A   L + +
Sbjct: 309 DALTYGYLMHGLCRMGQVDEARALLNKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNM 368

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
              G+ PD    N++ID L K G    AL++ + ++  +  P+  T+  L++  C  GR 
Sbjct: 369 VIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRL 428

Query: 377 SLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
               ++V  +  +    + V YN L+   CK G   +A++L+  M  KG  PD Y+F  L
Sbjct: 429 EEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSL 488

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           + GLC   K++EA+++Y  + +     N   +  +V   +      +A +L    +    
Sbjct: 489 INGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGC 548

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
           PLD ++Y   I+ L + G  E+   L+ +M    + P   +  +++   C+   +    +
Sbjct: 549 PLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALK 608

Query: 554 LLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKL------ 607
            LQD+I   +  D  T   L   + K      A N   ++ + G+ PD +          
Sbjct: 609 FLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHC 668

Query: 608 --GLLSDETMTPVSLFD-GFVPCE 628
             G+ +D  +      D GF+P E
Sbjct: 669 HEGMFNDACLLLYKGVDSGFIPNE 692



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/433 (24%), Positives = 191/433 (44%), Gaps = 15/433 (3%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DVQ+F+ +I  + R  GR      ++  +   G    A T+   +    R    G V EA
Sbjct: 274 DVQTFNDVIHGLCR-AGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCR---MGQVDEA 329

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-----PNFLSFNIALCNLC 196
              + +    PNT   N ++      GR +    +L    +     P+  +FNI +  L 
Sbjct: 330 RALLNKIP-NPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLV 388

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
           K   + +  +++  MV K F PNV  + IL+N FCK GR+ EA +++  M   G SL+  
Sbjct: 389 KKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTV 448

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
            +  LI    +   ++ A  L+ +M   GC P++ T+ SLI G  +      A S    +
Sbjct: 449 GYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDM 508

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR- 375
             EG   + V +N L+       S   A  + D +L      D+ T+  L+  +C +G  
Sbjct: 509 FLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAV 568

Query: 376 ---FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
                L  +++ G  +   ++  N L+S  C+ G  N A+K    M+ +G TPD  ++  
Sbjct: 569 EKGLGLFEEML-GKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNS 627

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           L+ GLC    + EA N++  +       +A  +  ++ R    G  + A  L  + +   
Sbjct: 628 LINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSG 687

Query: 493 YPLDVVSYTVAIR 505
           +  + V++++ I 
Sbjct: 688 FIPNEVTWSILIN 700



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 102/429 (23%), Positives = 180/429 (41%), Gaps = 4/429 (0%)

Query: 115 CVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI 174
           C    QTF   +    R        +  D M   GF+ +      +M  L ++G+VD   
Sbjct: 271 CEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEAR 330

Query: 175 KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVI-GMMVRKGFYPNVRMFEILLNCFCKM 233
            +L +   PN + +N  +            KD++   MV  G+ P+   F I+++   K 
Sbjct: 331 ALLNKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKK 390

Query: 234 GRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTY 293
           G +  A +LL  M+      +V  +T+LI+GF +  RL+ A  +   M   G S N V Y
Sbjct: 391 GYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGY 450

Query: 294 TSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE 353
             LI    +      A      +  +G  PD+   N LI+ L K    ++AL +Y  +  
Sbjct: 451 NCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFL 510

Query: 354 LKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQ 410
             ++ ++ T+ +L+    +        KLV  +       D + YN L+   CK G   +
Sbjct: 511 EGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEK 570

Query: 411 AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
            + L+  ML KG  P   S   L+ GLC   K+++A+   Q ++      +   + ++++
Sbjct: 571 GLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLIN 630

Query: 471 RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
            L + G   +A  LF +   E    D ++Y   I      G   +A +L  +       P
Sbjct: 631 GLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIP 690

Query: 531 NAYTYRVML 539
           N  T+ +++
Sbjct: 691 NEVTWSILI 699



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/234 (22%), Positives = 99/234 (42%), Gaps = 5/234 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D+ +F+ +I+ + +   + E    +  ++   G +    T+   +  +   +      + 
Sbjct: 481 DIYTFNSLINGLCK-NHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKL 539

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
            DEM   G   +    N ++  L K G V+ G+ + +E       P  +S NI +  LC+
Sbjct: 540 VDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCR 599

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              V++    +  M+ +G  P++  +  L+N  CKMG + EA  L   + + G       
Sbjct: 600 TGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAIT 659

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
           +  LI         + A  L  K V +G  PN VT++ LI   ++   +   FS
Sbjct: 660 YNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVKKIPWGARFS 713


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 129/486 (26%), Positives = 214/486 (44%), Gaps = 44/486 (9%)

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNI 190
           Y  VL    +M  FG  PN +  NI+++    + R+        K+LK    PN  +FN 
Sbjct: 84  YSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNT 143

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +  LC    +  V  +   M+ +GF PNV  +  L+N  CK+G  + A +LL  M    
Sbjct: 144 LIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGN 203

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF---------- 300
               V  +T +ID   + R++  A  L+ +M+  G SP++ TY SLI             
Sbjct: 204 CQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVT 263

Query: 301 --------------------------MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
                                      E K+   A   +DM+   G  P++V +N L+D 
Sbjct: 264 ALLNEMVNSKIMPNVVIFSTVVDALCKEGKVME-AHDVVDMMIKRGVEPNVVTYNALMDG 322

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEAD 391
                  D+A+ V+D ++     PD  ++ +L++  C   R      L + +C  E+  +
Sbjct: 323 HCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPN 382

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
            V Y+ L+   C  G    A+ L++ M+ +G  PD  S+  LL  LC  R++DEAI + +
Sbjct: 383 TVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLK 442

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
            I  +N   +  ++T ++D +  AG    A  LF     +    +V +YT+ I GL + G
Sbjct: 443 AIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQG 502

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSI 571
              EA  L+ +MK     PN  TY ++   F +        +LLQ+++      D  TS 
Sbjct: 503 LLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTST 562

Query: 572 RLTKFI 577
            L + +
Sbjct: 563 VLVEML 568



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 96/388 (24%), Positives = 189/388 (48%), Gaps = 5/388 (1%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+   F   L ++ K+   S V  +   M   G  PN+    IL+N FC + R+  A+ +
Sbjct: 66  PSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSV 125

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           L  ++ LG   ++  +  LI G     ++    +L++KM+  G  PNVVTY +LI G  +
Sbjct: 126 LAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCK 185

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
               S A   L  +E     PD+V +  +ID L K      A +++  ++   + P  +T
Sbjct: 186 VGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFT 245

Query: 363 FCSLLSTVCLSGRF----SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           + SL+  +C    +    +LL ++V   ++  ++V+++ ++   CK G   +A  + + M
Sbjct: 246 YNSLIHALCNLCEWKHVTALLNEMV-NSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMM 304

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
           + +G  P+  ++  L+ G C   ++DEA+ V+  +V    A +   ++ +++   +  R 
Sbjct: 305 IKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRI 364

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            KA+ LF     ++   + V+Y+  + GL   GR ++A  L+ +M      P+  +Y ++
Sbjct: 365 EKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCIL 424

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELD 566
           L   CK R +     LL+ +  + ++ D
Sbjct: 425 LDYLCKNRRLDEAIALLKAIEGSNMDPD 452



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/342 (24%), Positives = 161/342 (47%), Gaps = 7/342 (2%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           F EM   G +P+ F  N ++  L  +        +L E      +PN + F+  +  LCK
Sbjct: 231 FSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCK 290

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              V    DV+ MM+++G  PNV  +  L++  C    + EA ++   M+  G +  V +
Sbjct: 291 EGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVS 350

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           ++ LI+G+ +++R++ A YL+E+M +    PN VTY++L+ G         A +    + 
Sbjct: 351 YSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMV 410

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
           + G  PD V + +L+D L K    D+A+ +   +    + PD   +  ++  +C +G   
Sbjct: 411 TRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELE 470

Query: 378 LLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
               L   L    +  ++  Y  +++  C+ G   +A KL+  M  KG++P+  ++  + 
Sbjct: 471 AARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLIT 530

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
           RG     +    I + Q ++    + +    T +V+ L + G
Sbjct: 531 RGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDG 572



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 80/359 (22%), Positives = 153/359 (42%), Gaps = 3/359 (0%)

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           M+ +    S+  +T L+    +++       L  +M   G  PN+ T   LI  F   + 
Sbjct: 59  MLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQR 118

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
              AFS L  +   GH P++   N LI  L   G   + L ++D ++     P+  T+ +
Sbjct: 119 LGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGT 178

Query: 366 LLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
           L++ +C  G  S   +L+  +E    + D+VVY +++   CK     QA  L++ M+ +G
Sbjct: 179 LINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQG 238

Query: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI 482
            +P  +++  L+  LC   +      +   +V +    N  + + +VD L + G+  +A 
Sbjct: 239 ISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAH 298

Query: 483 QLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
            +    I      +VV+Y   + G       +EA  ++  M      P+  +Y  ++  +
Sbjct: 299 DVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGY 358

Query: 543 CKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           CK + I+    L +++    +  +  T   L   +        A+    EM   G IPD
Sbjct: 359 CKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPD 417



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 118/262 (45%), Gaps = 14/262 (5%)

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
           M S+   FL    +  H+  L F+ +           DDAL  ++ +L +   P    F 
Sbjct: 24  MLSLPPHFLSSSHNTFHSKSLNFNTL-----------DDALSSFNRMLHMHPPPSIADFT 72

Query: 365 SLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
            LL ++     +S +  L   ++   +  ++   N L++ FC       A  +   +L  
Sbjct: 73  KLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKL 132

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
           G  P+  +F  L+RGLC   KI E ++++  ++      N   +  +++ L + G    A
Sbjct: 133 GHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAA 192

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
           I+L R         DVV YT  I  L +  +  +A+ L+S+M H  + P+ +TY  ++ +
Sbjct: 193 IRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHA 252

Query: 542 FCKERNIKMVKRLLQDVIDARI 563
            C     K V  LL ++++++I
Sbjct: 253 LCNLCEWKHVTALLNEMVNSKI 274


>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63070, mitochondrial; Flags: Precursor
 gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
 gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 111/421 (26%), Positives = 212/421 (50%), Gaps = 14/421 (3%)

Query: 143 DEMGRFGFT------PNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIAL 192
           D +G FG        P+    + ++  + K+ + DL I + ++ Q      N  +++I +
Sbjct: 58  DAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFI 117

Query: 193 CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
              C+ + +S    ++G M++ G+ P++     LLN FC   RI+EA  L+  M+ +G  
Sbjct: 118 NYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 177

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
                +T L+ G  +  +   A  L E+MV  GC P++VTY ++I G  +     +A + 
Sbjct: 178 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 237

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
           L+ +E      D+V +N +ID L K    DDA D+++ +    + PD +T+  L+S +C 
Sbjct: 238 LNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCN 297

Query: 373 SGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTML-DKGFTPDNY 428
            GR+S   +L+  +    +  DLV +NAL+  F K G   +A KLY+ M+  K   PD  
Sbjct: 298 YGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVV 357

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
           ++  L++G C  ++++E + V++ +       N   +T ++    +A  C  A  +F++ 
Sbjct: 358 AYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 417

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
           + +    D+++Y + + GL   G  E A +++  M+   +  +  TY  M+ + CK   +
Sbjct: 418 VSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKV 477

Query: 549 K 549
           +
Sbjct: 478 E 478



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 91/428 (21%), Positives = 189/428 (44%), Gaps = 9/428 (2%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           R      +V ++  +G      TF   +   ++       +   + M   G  P+     
Sbjct: 160 RISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYG 219

Query: 159 IVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
            V++ L K G  DL + +L + +      + + +N  +  LCK   + +  D+   M  K
Sbjct: 220 AVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETK 279

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           G  P+V  +  L++C C  GR ++A +LL  M+    +  +  +  LID F +  +L  A
Sbjct: 280 GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEA 339

Query: 275 GYLWEKMVQNG-CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
             L+++MV++  C P+VV Y +LIKGF + K           +   G   + V +  LI 
Sbjct: 340 EKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIH 399

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEA 390
              +    D+A  V+  ++   + PD  T+  LL  +C +G      ++ + +   +++ 
Sbjct: 400 GFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKL 459

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           D+V Y  ++   CKAG       L+ ++  KG  P+  ++  ++ G C     +EA  ++
Sbjct: 460 DIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 519

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
             +  + P  N+  +  ++   +  G    + +L +      +  D  ++ + +  +L  
Sbjct: 520 VEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGL-VTNMLHD 578

Query: 511 GRTEEAYI 518
           GR +++++
Sbjct: 579 GRLDKSFL 586



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 126/259 (48%), Gaps = 6/259 (2%)

Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
           F DM++S    P +V  + L+  ++KM  +D  + + + +  L +  + YT+   ++  C
Sbjct: 63  FGDMVKSRPF-PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFC 121

Query: 372 LSGRFSL----LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
              + SL    L K++  L     +V  N+LL+ FC     ++AV L + M++ G+ PD 
Sbjct: 122 RRSQLSLALAILGKMM-KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDT 180

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
            +F  L+ GL    K  EA+ + + +V+     +   + A+++ L + G    A+ L  +
Sbjct: 181 VTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNK 240

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN 547
               K   DVV Y   I GL +    ++A+ L+++M+   + P+ +TY  ++   C    
Sbjct: 241 MEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGR 300

Query: 548 IKMVKRLLQDVIDARIELD 566
                RLL D+++  I  D
Sbjct: 301 WSDASRLLSDMLEKNINPD 319



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/328 (21%), Positives = 136/328 (41%), Gaps = 32/328 (9%)

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
           ++ +A  L G M+      S+  ++ L+    ++ + D+   L E+M   G S N+ TY+
Sbjct: 55  KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
             I  F      S+A + L  +   G+ P +V  N L++         +A+ + D ++E+
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174

Query: 355 KLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKL 414
              PD+ TF +L+  +    + S                                +AV L
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKAS--------------------------------EAVAL 202

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
              M+ KG  PD  ++  ++ GLC   + D A+N+   +       +  ++  I+D L +
Sbjct: 203 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCK 262

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
                 A  LF +   +    DV +Y   I  L   GR  +A  L S M    + P+   
Sbjct: 263 YKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVF 322

Query: 535 YRVMLLSFCKERNIKMVKRLLQDVIDAR 562
           +  ++ +F KE  +   ++L  +++ ++
Sbjct: 323 FNALIDAFVKEGKLVEAEKLYDEMVKSK 350



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/263 (22%), Positives = 115/263 (43%), Gaps = 3/263 (1%)

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL---LPKLVCGLEVEADLVVYNAL 398
           DDA+ ++  +++ +  P    F  LLS +    +F L   L + +  L +  +L  Y+  
Sbjct: 57  DDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIF 116

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           ++YFC+    + A+ +   M+  G+ P   +   LL G C   +I EA+ +   +V    
Sbjct: 117 INYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 176

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
             +    T +V  L +  +  +A+ L  R +V+    D+V+Y   I GL + G  + A  
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 236

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
           L ++M+   +  +   Y  ++   CK +++     L   +    I+ D  T   L   + 
Sbjct: 237 LLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLC 296

Query: 579 KFHSSSSAVNQLVEMCNLGLIPD 601
            +   S A   L +M    + PD
Sbjct: 297 NYGRWSDASRLLSDMLEKNINPD 319


>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
 gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
          Length = 721

 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 129/477 (27%), Positives = 231/477 (48%), Gaps = 35/477 (7%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF---KIGR- 169
           GC    + F   +  Y R   Y    +   +M + G  P     NI++  +    + G+ 
Sbjct: 107 GCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKD 166

Query: 170 -VDLGIKVLKET-------QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
            +DL  K   E           N  +F+  LC + K     NV   I  M+ KGF P+  
Sbjct: 167 VLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNV---IREMMSKGFIPDTS 223

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            +  ++   C   ++ +A+QL   M   G +  V  +T LID F +   ++ A   +++M
Sbjct: 224 TYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEM 283

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
            ++GC+PNVVTYT+LI  +++++  S A    +M+ S+G  P++V +  LID L K G  
Sbjct: 284 ERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKI 343

Query: 342 DDALDVY-----------DGLLELKLV------PDSYTFCSLLSTVCLSGRFSLLPKLVC 384
           + A  +Y           D  +  ++V      P+ +T+ +L+  +C + +      L+ 
Sbjct: 344 EKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLK 403

Query: 385 GLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
            + VE    + VVY+AL+   CKAG  ++A +++ TML+ G+ P+ Y++  L+  L   +
Sbjct: 404 SMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDK 463

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYT 501
           ++D A+ V   ++ N+ A N  ++T ++D L + G+  +A +L      +    +VV+YT
Sbjct: 464 RLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYT 523

Query: 502 VAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
             I G  + GR E+   L  QM      PN  TYRV++   C    +    +LL+++
Sbjct: 524 AMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEM 580



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 119/518 (22%), Positives = 226/518 (43%), Gaps = 41/518 (7%)

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIG----RVDLGIKVLKETQLPNFLSFNIA 191
           G   EA   + +  F P+T     ++  L +       +D   ++   + LPN L++ I 
Sbjct: 24  GKWREALSLLEKEEFVPDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLPNVLTYRIL 83

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           LC       +   K ++ MM+ +G YP+ R+F  L++ +C+ G  A AY+LL  M+  G 
Sbjct: 84  LCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGC 143

Query: 252 SLSVNAWTVLIDGFRRLRR-----LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
                 + +LI G           LD+A   + +M++ G   N V  ++  +       F
Sbjct: 144 QPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKF 203

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
             A++ +  + S+G  PD   ++ +I  L      + A  ++  +    + PD Y + +L
Sbjct: 204 EKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTL 263

Query: 367 LSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           + + C +G           +E +    ++V Y AL+  + K+   ++A ++Y  ML KG 
Sbjct: 264 IDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGC 323

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN---PAVNAH--------------VHT 466
           TP+  ++  L+ GLC A KI++A  +Y+ +   N   P V+ H               + 
Sbjct: 324 TPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYG 383

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
           A+VD L +A +  +A  L +   VE    + V Y   I G  + G+ +EA  +++ M   
Sbjct: 384 ALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLEC 443

Query: 527 AVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSA 586
              PN YTY  ++    K++ + +  ++L  +++     +      +   + K   +  A
Sbjct: 444 GYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEA 503

Query: 587 VNQLVEMCNLGLIPDEMWRKLGLLSDETMTPVSLFDGF 624
              +V M   G  P+             +T  ++ DGF
Sbjct: 504 YKLMVMMEEKGCNPN------------VVTYTAMIDGF 529



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 116/519 (22%), Positives = 216/519 (41%), Gaps = 41/519 (7%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G+FE    ++ E+   G +    T+   +             + F EM R G  P+ +  
Sbjct: 201 GKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVY 260

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
             ++D   K G ++       E +     PN +++   +    K   VS   +V  MM+ 
Sbjct: 261 TTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLS 320

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL-SVNAWTVLIDGFRRLRRLD 272
           KG  PN+  +  L++  CK G+I +A Q+  +M      +  V+    ++DG        
Sbjct: 321 KGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASN----- 375

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
                          PNV TY +L+ G  +A     A   L  +  EG  P+ V ++ LI
Sbjct: 376 --------------EPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALI 421

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVE 389
           D   K G  D+A +V+  +LE    P+ YT+ SL+  +    R  L  K++  +      
Sbjct: 422 DGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCA 481

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            ++V+Y  ++   CK G  ++A KL   M +KG  P+  ++  ++ G   + ++++ + +
Sbjct: 482 PNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLEL 541

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
            Q +     A N   +  +++     G   +A +L        +P  V  Y    R ++E
Sbjct: 542 LQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGY----RKVIE 597

Query: 510 GGRTEEAYILY-----SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV--IDAR 562
           G   E    LY     S+   + V P    YRV++ +F K   +++   L +++      
Sbjct: 598 GFNREFIASLYLSFEISENDSVPVAP---VYRVLIDNFIKAGRLEIALELNEELSSFSPF 654

Query: 563 IELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
              + +  I L + +   H +  A     +M + G IP+
Sbjct: 655 SAANQNIHITLIENLSLAHKADKAFELYADMISRGSIPE 693



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 108/465 (23%), Positives = 193/465 (41%), Gaps = 64/465 (13%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV  +  +I    +  G  E  R    E+ R GC     T+   +  Y +        E 
Sbjct: 256 DVYVYTTLIDSFCK-AGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEV 314

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK---------------------ET 180
           ++ M   G TPN      ++D L K G+++   ++ K                      +
Sbjct: 315 YEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGAS 374

Query: 181 QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAY 240
             PN  ++   +  LCK   V   +D++  M  +G  PN  +++ L++  CK G++ EA 
Sbjct: 375 NEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQ 434

Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
           ++   M+  G   +V  ++ LID   + +RLD+A  +  KM++N C+PNVV YT +I G 
Sbjct: 435 EVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGL 494

Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
            +      A+  + M+E +G  P++V +  +ID   K G  +  L++   +      P+ 
Sbjct: 495 CKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNF 554

Query: 361 YTFCSLLSTVCLSG------------RFSLLPKLVCG-------------------LEV- 388
            T+  L++  C +G            + +  P+ V G                    E+ 
Sbjct: 555 VTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNREFIASLYLSFEIS 614

Query: 389 EADLV----VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP----DNYSFVGLLRGLCGA 440
           E D V    VY  L+  F KAG    A++L   +    F+P    +    + L+  L  A
Sbjct: 615 ENDSVPVAPVYRVLIDNFIKAGRLEIALELNEEL--SSFSPFSAANQNIHITLIENLSLA 672

Query: 441 RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
            K D+A  +Y  ++         +   ++  L+   R  +A+QL 
Sbjct: 673 HKADKAFELYADMISRGSIPELSILVHLIKGLLRVNRWEEALQLL 717



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 140/319 (43%), Gaps = 38/319 (11%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLN 199
           E F  M   G+ PN +  + ++D LFK  R+DL +KVL +                    
Sbjct: 435 EVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSK-------------------- 474

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
                      M+     PNV ++  +++  CK+G+  EAY+L+ +M   G + +V  +T
Sbjct: 475 -----------MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYT 523

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
            +IDGF +  R++    L ++M   GC+PN VTY  LI       +   A   L+ ++  
Sbjct: 524 AMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQT 583

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
                +  +  +I+  ++   +  +L +   + E   VP +  +  L+     +GR  + 
Sbjct: 584 YWPRHVAGYRKVIEGFNR--EFIASLYLSFEISENDSVPVAPVYRVLIDNFIKAGRLEIA 641

Query: 380 PKLVCGLE-----VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
            +L   L        A+  ++  L+     A   ++A +LY  M+ +G  P+    V L+
Sbjct: 642 LELNEELSSFSPFSAANQNIHITLIENLSLAHKADKAFELYADMISRGSIPELSILVHLI 701

Query: 435 RGLCGARKIDEAINVYQGI 453
           +GL    + +EA+ +   I
Sbjct: 702 KGLLRVNRWEEALQLLDSI 720


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 125/480 (26%), Positives = 225/480 (46%), Gaps = 48/480 (10%)

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNI 190
           Y  V   +++M   G +P+    NI+++ L  + RV  G+ V    L+   +P+ +++  
Sbjct: 112 YSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTT 171

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +  LC  + +S    +   M + G  PN   +  L+   C+ G I+ A +L   M+   
Sbjct: 172 LIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDS 231

Query: 251 TSLSVN------AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
           +   +N      +++++ID   + RR D A  L+E+M   G +P V++YTSLI GF    
Sbjct: 232 SLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGG 291

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
            +  A    + + ++G  P++V  NVLID L K G   +A D+ + +++  +VP+  T+ 
Sbjct: 292 KWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYN 351

Query: 365 SLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
           SL+   CL G  +   +L   +     E D++ Y  L++ +CK     +A+KLYN ML  
Sbjct: 352 SLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQV 411

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQ--------------GIVMN----------- 456
           G  PD  ++  LL GL    K+ +A  ++               GI +N           
Sbjct: 412 GKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEA 471

Query: 457 ----------NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
                     N  ++      ++D L +AG+   A +LF +   E+   DVV+Y + I  
Sbjct: 472 MELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHE 531

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
              GG+  +A IL+ +M+     P+  TY  ++  F + + ++ V  LL  ++   + LD
Sbjct: 532 FCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLD 591



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/336 (25%), Positives = 167/336 (49%), Gaps = 15/336 (4%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNL 195
           + F+EM   G TP   +   ++      G+ +   ++  E       PN ++FN+ +  L
Sbjct: 263 DLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVL 322

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
           CK   V   KD++ +M+++G  PN+  +  L+  FC +G +  A +L   M + G    V
Sbjct: 323 CKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDV 382

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
             +TVLI+G+ +  +++ A  L+  M+Q G  P+V TY +L+ G  +      A     +
Sbjct: 383 ICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGV 442

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
           ++  G   DL  + + ++ L K G   +A+++++ L    +  D   F  L+  +C +G+
Sbjct: 443 MKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGK 502

Query: 376 -------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
                  F  LP+     E++ D+V YN ++  FC+ G   +A  L+  M   G TPD  
Sbjct: 503 LETAWELFEKLPQE----ELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKI 558

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV 464
           ++  L+RG   ++K+++ + +   +V  + +++ ++
Sbjct: 559 TYATLIRGFFESKKLEKVVELLHMMVQRDVSLDVNI 594



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/437 (23%), Positives = 194/437 (44%), Gaps = 18/437 (4%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
           +R Y  D+ ++  +I  +  +  R      +   + ++GC   A T+   ++   R    
Sbjct: 159 RRGYIPDIVTYTTLIKGLC-MEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNI 217

Query: 136 GMVLEAFDEM----GRFG--FTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNF 185
            + L+   EM      +G  F P   + +I++D L K  R D    + +E ++    P  
Sbjct: 218 SIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTV 277

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGL 245
           +S+   +   C        K +   MV +G  PNV  F +L++  CK G++ EA  LL +
Sbjct: 278 ISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEV 337

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           MI  G   ++  +  LI+GF  +  L+ A  L+  M   GC P+V+ YT LI G+ +   
Sbjct: 338 MIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSK 397

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP-DSYTFC 364
              A    + +   G  PD+  +  L+  L + G   DA  ++ G++++  +P D Y + 
Sbjct: 398 VEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLF-GVMKVYGIPGDLYIYG 456

Query: 365 SLLSTVCLSG----RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
             L+ +C +G       L  KL     ++ D+  +N L+   CKAG    A +L+  +  
Sbjct: 457 IFLNGLCKNGCLFEAMELFNKLK-SYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQ 515

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
           +   PD  ++  ++   C   ++ +A  ++Q +  N    +   +  ++    E+ +  K
Sbjct: 516 EELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEK 575

Query: 481 AIQLFRRAIVEKYPLDV 497
            ++L    +     LDV
Sbjct: 576 VVELLHMMVQRDVSLDV 592



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 78/360 (21%), Positives = 152/360 (42%), Gaps = 11/360 (3%)

Query: 231 CKMGRIA--EAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSP 288
           CK G I   +A+Q   LM+    +  ++++T L+ G  +++      YL+ +M  +G SP
Sbjct: 70  CKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 289 NVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVY 348
           +  T   L+             + +  +   G+ PD+V +  LI  L        A  ++
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 349 DGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---------VCGLEVEADLVVYNALL 399
             + +L   P++ T+ +L+  +C +G  S+  KL         + G+  +  ++ Y+ ++
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIII 249

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
              CK    ++A  L+  M  +G TP   S+  L+ G C   K +EA  ++  +V     
Sbjct: 250 DALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQ 309

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            N      ++D L + G+  +A  L    I      ++++Y   I G    G    A  L
Sbjct: 310 PNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSAREL 369

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK 579
           +  M      P+   Y V++  +CK   ++   +L   ++      D  T   L   +F+
Sbjct: 370 FVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQ 429



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 62/296 (20%), Positives = 118/296 (39%), Gaps = 32/296 (10%)

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           AF F  ++      P L     L+  L+K+  Y     +Y+ +    + PD  T   LL+
Sbjct: 80  AFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLN 139

Query: 369 TVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
            +C   R      ++ G+       D+V Y  L+   C     ++A  L+  M   G TP
Sbjct: 140 CLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTP 199

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           +  ++  L++GLC    I  A+ ++Q ++ ++     +                      
Sbjct: 200 NAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPV------------------ 241

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
                      V+SY++ I  L +  R +EA  L+ +MK   + P   +Y  ++  FC  
Sbjct: 242 -----------VISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCG 290

Query: 546 RNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
              +  KRL  ++++  ++ +  T   L   + K      A + L  M   G++P+
Sbjct: 291 GKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPN 346


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 117/452 (25%), Positives = 214/452 (47%), Gaps = 46/452 (10%)

Query: 115 CVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI 174
           C+I  Q   L   I   G+ Y +V+    +M   G +PN +  +I M+   ++ RVDLG 
Sbjct: 91  CII--QFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGF 148

Query: 175 KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
            VL +                               +++ G  P +  F  L+N  CK+G
Sbjct: 149 SVLAK-------------------------------VIKLGLQPTIVTFTTLINGLCKVG 177

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
             A+A +L   M+  G    V  +  +I+G  ++     A  L +KM + GC PN+VTY+
Sbjct: 178 EFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYS 237

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
           +LI      ++ + A      ++++G +PD+  +  LI  L K   + +A  + + +  L
Sbjct: 238 TLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSL 297

Query: 355 KLVPDSYTFCSLLSTVCLSGRFSL---LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQA 411
            ++PD  TF  L+ T C  G+ S    + K +  + VE ++V Y++L+  +       +A
Sbjct: 298 NIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEA 357

Query: 412 VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN-----VYQGIVMNNPAVNAHVHT 466
            KL++ M+ KG  P+ +S+  L+ G C A++IDEA+      ++QG+  NN + N  +H 
Sbjct: 358 RKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHG 417

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
                  + G+  +A  LFR         D+ +Y++ + G  + G   +A+ L+  M+  
Sbjct: 418 -----FCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQST 472

Query: 527 AVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
            + PN   Y +++ + CK  N K  ++L  ++
Sbjct: 473 YLKPNLVMYTILVHAMCKSGNHKDARKLFSEL 504



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 91/363 (25%), Positives = 170/363 (46%), Gaps = 8/363 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV +++ +I+ + ++ G      G++ ++   GC     T+   +    R  +    L+ 
Sbjct: 197 DVYTYNTIINGLCKI-GETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDI 255

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           F  M   G +P+ F    ++  L K  R      +L E      +P+ ++FN+ +   CK
Sbjct: 256 FSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCK 315

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              VS    V+  M   G  PNV  +  L+  +     + EA +L  +MIT G   ++ +
Sbjct: 316 EGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFS 375

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           + +LI+G+ + +R+D A  L+ +M+  G +PN V+Y +LI GF +      A      + 
Sbjct: 376 YNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMC 435

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
           + G+ PDL  +++L+D   K G    A  ++  +    L P+   +  L+  +C SG   
Sbjct: 436 TNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHK 495

Query: 378 LLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
              KL   L V+     + +Y  +++  CK G  ++A++ +  M   G  PD  S+  ++
Sbjct: 496 DARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVII 555

Query: 435 RGL 437
           RGL
Sbjct: 556 RGL 558



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/292 (27%), Positives = 141/292 (48%), Gaps = 7/292 (2%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE-TQL---PNFLSFNIALCNLCK 197
            +EM      P+    N+++D   K G+V   + VLK  T++   PN ++++  +     
Sbjct: 291 LNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSL 350

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
             DV   + +  +M+ KG  PN+  + IL+N +CK  RI EA QL   MI  G + +  +
Sbjct: 351 WTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVS 410

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  LI GF +L +L  A  L+  M  NG  P++ TY+ L+ GF +      AF     ++
Sbjct: 411 YNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQ 470

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
           S    P+LV + +L+  + K G++ DA  ++  L    L P    + ++++ +C  G   
Sbjct: 471 STYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLD 530

Query: 378 LLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
              +    +E +    D + YN ++    +    ++A+ L   M D+GF  D
Sbjct: 531 EALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIAD 582



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/333 (22%), Positives = 153/333 (45%), Gaps = 3/333 (0%)

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           D+   L ++M   G SPN+ T +  +  F + +   + FS L  +   G  P +V    L
Sbjct: 110 DVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTL 169

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---V 388
           I+ L K+G +  A++++D ++     PD YT+ ++++ +C  G  +    L+  +E    
Sbjct: 170 INGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGC 229

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
           + ++V Y+ L+   C+    N+A+ +++ M  KG +PD +++  L++GLC   +  EA  
Sbjct: 230 QPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASA 289

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           +   +   N   +      +VD   + G+  +A+ + +         +VV+Y+  + G  
Sbjct: 290 LLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYS 349

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
                 EA  L+  M      PN ++Y +++  +CK + I    +L  ++I   +  +  
Sbjct: 350 LWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNV 409

Query: 569 TSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           +   L     +      A +    MC  G +PD
Sbjct: 410 SYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPD 442



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/272 (23%), Positives = 120/272 (44%), Gaps = 41/272 (15%)

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----------------- 375
           D  S   + DDAL  ++ +L  K +P    F  LLS +   G+                 
Sbjct: 65  DASSSFRNIDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGL 124

Query: 376 -----------------------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAV 412
                                  FS+L K++  L ++  +V +  L++  CK G   QAV
Sbjct: 125 SPNIYTLSIFMNCFCQLQRVDLGFSVLAKVI-KLGLQPTIVTFTTLINGLCKVGEFAQAV 183

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
           +L++ M+ KG  PD Y++  ++ GLC   +   A  + + +       N   ++ ++D L
Sbjct: 184 ELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSL 243

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
                 ++A+ +F     +    D+ +YT  I+GL +  R +EA  L ++M  + + P+ 
Sbjct: 244 CRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDI 303

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
            T+ V++ +FCKE  +     +L+ + +  +E
Sbjct: 304 VTFNVLVDTFCKEGKVSEALGVLKTMTEMGVE 335



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 97/216 (44%), Gaps = 4/216 (1%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV--- 170
           GC     ++ + +  Y + +     ++ F+EM   G TPN  + N ++    ++G++   
Sbjct: 368 GCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREA 427

Query: 171 -DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
            DL   +     LP+  +++I L   CK   +     +   M      PN+ M+ IL++ 
Sbjct: 428 QDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHA 487

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
            CK G   +A +L   +   G    V  +T +I+G  +   LD A   +  M  +GC P+
Sbjct: 488 MCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPD 547

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL 325
            ++Y  +I+G ++ K  S A   +  +   G   D+
Sbjct: 548 EISYNVIIRGLLQHKDESRALLLVGEMRDRGFIADV 583


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 116/491 (23%), Positives = 237/491 (48%), Gaps = 11/491 (2%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           + ++   +V ++  +I  + +     E+ + ++ E+   GC      F   ++ + R   
Sbjct: 2   RDKNIAANVFTYSSIIKSLVKEAKPEESYK-VLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET----QLPNFLSFNI 190
                E +  M   G+ P+  + +I++  L KIG++D  +K+L E     Q P+  +++ 
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +  L K   V +   +   M+R G +P+  MF  L+   C+ G++ +A +    M   G
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
              +V  + VL+ G     +L+ A  L+ +M  + CSP+VVTY +L+    +A+      
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
              + + + G+ P+++  + LI  L + G  + AL+V+  +LE    P+ YT+ +L+S +
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGL 300

Query: 371 CLSGRF----SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTML-DKGFTP 425
           C + +      L  K+     +  D V YN+L++ +CK G  ++A KLY  M    G  P
Sbjct: 301 CRAEKVIQARELFEKMTQAC-IPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQP 359

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
              +F  L+ G C   K+  A  +   +     A ++  +  ++  L  A +  +A++++
Sbjct: 360 TIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVY 419

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
           ++   +K+ LD VS    + GL + G  ++AY ++   +     PN  T+R++  S  K 
Sbjct: 420 KQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKL 479

Query: 546 RNIKMVKRLLQ 556
             ++  ++L++
Sbjct: 480 GRVEDAQKLME 490



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 85/355 (23%), Positives = 163/355 (45%), Gaps = 11/355 (3%)

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M  K    NV  +  ++    K  +  E+Y++L  M+  G +  V A+  ++ GF R   
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           ++ A  +++ MV++G  P+ V+Y  LI G  +      +   L  +   G  P +  ++ 
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG-------RFSLLPKLV 383
           L+  L+K    D A  ++D ++     PD   F  L+  +C +G       RF  +PK  
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 384 CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
           C    + ++ VYN LL   C +G   QA  L+  M     +PD  ++  LL  +C AR++
Sbjct: 181 C----QPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRV 236

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           +E   +++ +       N    + ++  L   G   KA+++F   +      +  +YT  
Sbjct: 237 EEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTL 296

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           I GL    +  +A  L+ +M    +PP+A  Y  ++  +CK  ++   ++L +++
Sbjct: 297 ISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREM 351



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/421 (25%), Positives = 177/421 (42%), Gaps = 9/421 (2%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
           +  Y  D  S+  +I  + ++ G+ +    I+ E+   G     Q +   +R   +    
Sbjct: 73  ESGYKPDNVSYHILIHGLAKI-GKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRV 131

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIA 191
                 FDEM R G  P+      ++  L + G+V    +  K+       PN   +N+ 
Sbjct: 132 DHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVL 191

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           L  LC    +     +   M      P+V  +  LL+  CK  R+ E  +L   M   G 
Sbjct: 192 LHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGY 251

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
             +V  ++ LI G  R   L+ A  ++  M++ GC PN  TYT+LI G   A+    A  
Sbjct: 252 VPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARE 311

Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE-LKLVPDSYTFCSLLSTV 370
             + +      PD V +N LI    K GS D+A  +Y  +     L P   TF +L+   
Sbjct: 312 LFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGF 371

Query: 371 CLSGRFSLLPKLVCGLEVE---ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           C  G+     +LV  +  +   AD   Y  L++   +A   ++A+++Y  M +K F  D 
Sbjct: 372 CKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDP 431

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
            S V  + GLC    ID+A  V++    +    N      + + LI+ GR   A +L   
Sbjct: 432 VSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEP 491

Query: 488 A 488
           A
Sbjct: 492 A 492



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/350 (20%), Positives = 146/350 (41%), Gaps = 32/350 (9%)

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
           + +V  ++ +I    +  + + +  + E+M+  GC+P+V  +  +++GF  +     A  
Sbjct: 7   AANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKARE 66

Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
               +   G+ PD V +++LI  L+K+G  D++L +                   LS + 
Sbjct: 67  VYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKI-------------------LSEMV 107

Query: 372 LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
           + G+                +  Y++L+    KA   + A  L++ M+  G  PD   F 
Sbjct: 108 MRGQ-------------TPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFY 154

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            L+ GLC A K+ +A   ++ +  +    N  V+  ++  L  +G+  +A  LF      
Sbjct: 155 ELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSH 214

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
               DVV+Y   +  + +  R EE   L+  M+     PN  T+  ++   C+   ++  
Sbjct: 215 SCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKA 274

Query: 552 KRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
             +   +++A  + + +T   L   + +      A     +M    + PD
Sbjct: 275 LEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPD 324


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 108/428 (25%), Positives = 209/428 (48%), Gaps = 7/428 (1%)

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCN 194
           +  F+ M     TP+TF  N ++  L  + R    I + K+ +L    P++ + NI +  
Sbjct: 43  VSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINC 102

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
            C    V      +  +++ G+ PN      L+   C  G++ EA +    ++  G  LS
Sbjct: 103 FCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLS 162

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
             ++ +LI+G  ++     A  L  ++ +    PNVV Y+ +I    +  +   A+    
Sbjct: 163 GISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYT 222

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            +  +G +PD+V +++L+     +G  + A+D+ + ++   + PD YT+  L+  +C  G
Sbjct: 223 EMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEG 282

Query: 375 RFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
           +      ++  +    V  D+VVY+ L+  +C     N A +++ TM   G TPD + + 
Sbjct: 283 KVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYS 342

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            ++ GLC  +++DEA+N+++ I   N   +   +T+++D L ++GR      LF   +  
Sbjct: 343 IMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDR 402

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
             P DV++Y   I  L + G  + A  L+++MK  A+ PN YT+ ++L   CK   +K  
Sbjct: 403 GQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNA 462

Query: 552 KRLLQDVI 559
               QD++
Sbjct: 463 LEFFQDLL 470



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 109/435 (25%), Positives = 213/435 (48%), Gaps = 10/435 (2%)

Query: 135 YGMVLEAFDEMGR---FGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLS 187
           +G V+ AF  + +    G+ PNT   N +M  L   G+V   +    KVL +    + +S
Sbjct: 106 FGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGIS 165

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           + I +  +CK+ +      ++  + R    PNV ++ ++++  CK   + EAY L   M+
Sbjct: 166 YGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMV 225

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
             G S  V  +++L+ GF  + +L+ A  L  +MV    +P++ TYT L+    +     
Sbjct: 226 GKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVK 285

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A + L ++       D+V ++ L+D    +   ++A  V+  + ++ + PD + +  ++
Sbjct: 286 EAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMI 345

Query: 368 STVCLSGRFSLLPKLVCGLEVE---ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
           + +C   R      L   +  +    D V Y +L+   CK+G  +    L++ MLD+G  
Sbjct: 346 NGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQP 405

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           PD  ++  L+  LC    +D AI ++  +       N +  T ++D L + GR   A++ 
Sbjct: 406 PDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEF 465

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
           F+  + + Y L+V +YTV I GL + G  +EA  L S+M+      +A T+ +M+ +F  
Sbjct: 466 FQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFD 525

Query: 545 ERNIKMVKRLLQDVI 559
           +      ++L++++I
Sbjct: 526 KDENDKAEKLVREMI 540



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/337 (22%), Positives = 150/337 (44%), Gaps = 3/337 (0%)

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
           ++R   A  L+++M  +   P+  T   +I  F       +AFS +  +   G+ P+ + 
Sbjct: 71  VKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTIT 130

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE 387
            N L+  L   G   +AL  +D +L         ++  L++ VC  G      +L+  +E
Sbjct: 131 LNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIE 190

Query: 388 ---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
              +  ++V+Y+ ++   CK    ++A  LY  M+ KG +PD  ++  L+ G C   +++
Sbjct: 191 RWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLN 250

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
            AI++   +V+ N   + + +T +VD L + G+  +A  +    +     LDVV Y+  +
Sbjct: 251 RAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLM 310

Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
            G         A  ++  M  + V P+ + Y +M+   CK + +     L +++    + 
Sbjct: 311 DGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMV 370

Query: 565 LDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            D  T   L   + K    S   +   EM + G  PD
Sbjct: 371 PDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPD 407



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 89/208 (42%), Gaps = 5/208 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV  +  MI+ + ++  R +    +  E+ +   V    T+   +    +      V + 
Sbjct: 337 DVHCYSIMINGLCKIK-RVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDL 395

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCK 197
           FDEM   G  P+    N ++D L K G +D  I    K+  +   PN  +F I L  LCK
Sbjct: 396 FDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCK 455

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
           +  + N  +    ++ KG+  NVR + +++N  CK G + EA  L   M   G       
Sbjct: 456 VGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVT 515

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
           + ++I  F      D A  L  +M+  G
Sbjct: 516 FEIMIRAFFDKDENDKAEKLVREMIARG 543


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 154/628 (24%), Positives = 272/628 (43%), Gaps = 63/628 (10%)

Query: 57  LLNCPSDL-IALSFFIWCAKQRDYFHDVQSFDHMISVVTRL--TGRFETVRGIVGELARV 113
           LL  P D+  ++  F W   Q+ Y H    FD    ++ +L   G F+T+  ++ ++ + 
Sbjct: 84  LLELPLDVPTSMELFQWAGTQKGYCH---MFDVYYMLIDKLGAAGEFKTIDALLMQMKQE 140

Query: 114 GCVIKAQTFLLFLRIYWRGEM-----------------------YGMVLE---------- 140
           G V +   F+L ++ Y R  +                       Y +VL+          
Sbjct: 141 GIVFRESLFILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKV 200

Query: 141 ---AFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALC 193
               F EM   G +P  +   +VM  L  +  VD    +LK+      +PN + +   + 
Sbjct: 201 VPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIH 260

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
            L K+  V+ V  ++  M+  G  P+V  F   ++  CKM RI EA +L+  M+  G + 
Sbjct: 261 ALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTP 320

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
           +   + VL+ G  R+ ++D A  L  K+     +PNVV + +LI G++       A + +
Sbjct: 321 NSFTYGVLMHGLCRMGKVDEARMLLNKVP----NPNVVLFNTLINGYVSRGRLDEAKAVM 376

Query: 314 -DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
            + + S G  PD+  +N LI  L K G    A ++ + +      P+  T+  L+   C 
Sbjct: 377 HESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCK 436

Query: 373 SGRFSLLPKLV---CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
            GR      ++    G  +  + V YN L+S  CK      A+ ++  M  KG  PD ++
Sbjct: 437 EGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFT 496

Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
           F  L+ GLC   K +EA+ +YQ +++     N   +  ++   +  G   +A++L    +
Sbjct: 497 FNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDML 556

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
               PLD ++Y   I+ L   G  E+   L+  M    + PN  +  +++   C+  NI+
Sbjct: 557 FRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQ 616

Query: 550 MVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM------ 603
                L+D+I   +  D  T   L   + K   +  A+N   ++   G+ PD +      
Sbjct: 617 HALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLI 676

Query: 604 -WR-KLGLLSDETMTPVSLFD-GFVPCE 628
            W  K G+  D  +      D GF+P E
Sbjct: 677 SWHCKEGMFDDAHLLLSRGVDSGFIPNE 704



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 119/459 (25%), Positives = 212/459 (46%), Gaps = 18/459 (3%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTF-------LLFLRIYWRGEMYGMVLEAFDEMGRFGF 150
           GR   V  ++ E+  +GC+    TF          LRI+   ++        D M   GF
Sbjct: 266 GRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKL-------VDRMLLRGF 318

Query: 151 TPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVI-G 209
           TPN+F   ++M  L ++G+VD    +L +   PN + FN  +        +   K V+  
Sbjct: 319 TPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHE 378

Query: 210 MMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLR 269
            M+  G  P++  +  L+   CK G +  A +L+  M   G   +V  +T+LID F +  
Sbjct: 379 SMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEG 438

Query: 270 RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHN 329
           RL+ A  + ++M   G + N V Y  LI    + +    A +    + S+G  PD+   N
Sbjct: 439 RLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFN 498

Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE 389
            LI  L K+  +++AL +Y  +L   ++ ++ T+ +L+      G      KLV  +   
Sbjct: 499 SLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFR 558

Query: 390 A---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
               D + YN L+   C+AG   + + L+  M+ KG  P+N S   L+ GLC    I  A
Sbjct: 559 GCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHA 618

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
           +   + ++      +   + ++++ L + GR  +A+ LF +  VE    D ++Y   I  
Sbjct: 619 LEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISW 678

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
             + G  ++A++L S+       PN  T+ +++ +F KE
Sbjct: 679 HCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKE 717



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 125/281 (44%), Gaps = 4/281 (1%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR E  R ++ E++  G  + A  +   +    + E     L  F +M   G  P+ F  
Sbjct: 438 GRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTF 497

Query: 158 NIVMDVLFKIGRVD--LGI--KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N ++  L K+ + +  LG+   +L E  + N +++N  +    +   +     ++  M+ 
Sbjct: 498 NSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLF 557

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +G   +   +  L+   C+ G I +   L   M++ G + +  +  +LI+G  R   +  
Sbjct: 558 RGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQH 617

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A      M+  G +P++VTY SLI G  +      A +  D L+ EG  PD + +N LI 
Sbjct: 618 ALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLIS 677

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
              K G +DDA  +    ++   +P+  T+  L+S     G
Sbjct: 678 WHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 718


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 127/510 (24%), Positives = 236/510 (46%), Gaps = 21/510 (4%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG 173
           G V     +   L   W+ +     L    EM   G  PN    N ++D L K    D  
Sbjct: 74  GIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRA 133

Query: 174 IKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFY-------PNVRM 222
            ++ +  +     P+ +++N  L  L +   +     +   M+ +  +       PNV  
Sbjct: 134 QELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVIT 193

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           + +L++  CK  R+++A +LL  M   G S  V  +T+L+DG  +  ++  A  +  +M+
Sbjct: 194 YSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREML 253

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
             GC PN+VTY SL+ G   A+  S A + +  +   G  P++V +  LID L K+G   
Sbjct: 254 DAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVK 313

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNAL 398
           DA  +   +++    PD   +  L++ +C + +     +LL + V G  ++ D+V Y+++
Sbjct: 314 DACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSG-GIKPDVVTYSSV 372

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           +   C++   ++A +L   +  +G  PD   +  L+ GLC A K+DEA ++Y+ +  +  
Sbjct: 373 IYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGC 432

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
             +   ++ ++D L +AGR  +A  L  R +    P   ++Y   I+GL +    +EA  
Sbjct: 433 DADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIE 492

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD-----VIDARIELDYHTSIRL 573
           L  +M+     P+A TY +++   C+   +     LL+      V      LD      L
Sbjct: 493 LVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSL 552

Query: 574 TKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
              + K    + A++   EM + G+IPD +
Sbjct: 553 IDGLCKAGRVAEALDYFQEMIDNGVIPDHI 582



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 130/524 (24%), Positives = 235/524 (44%), Gaps = 57/524 (10%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           R +    I+ E+   GC     T+   +    +        E F+ M     +P+    N
Sbjct: 94  RLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYN 153

Query: 159 IVMDVLFKIGRVDLGIKVLKETQ-----------LPNFLSFNIALCNLCKLNDVSNVKDV 207
            ++D LF+ G+++  + + +E              PN +++++ +  LCK N VS   ++
Sbjct: 154 TLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVEL 213

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
           +  M  +G  P+V  + IL++  CK  ++A A+++L  M+  G   ++  +  L+ G  R
Sbjct: 214 LESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCR 273

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
            RR+  A  L   M   GC+PNVVTY +LI G  +      A + L  +  +G  PDL+ 
Sbjct: 274 ARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMI 333

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR------------ 375
           +N+LI+ L K    D+++ +    +   + PD  T+ S++  +C S R            
Sbjct: 334 YNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVK 393

Query: 376 ----------FSLLPKLVC----------------GLEVEADLVVYNALLSYFCKAGFPN 409
                     +S L   +C                G   +AD+V Y+ L+   CKAG  +
Sbjct: 394 SRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVD 453

Query: 410 QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
           +A  L   M+  G  P   ++  L++GLC    +DEAI + + +  +N A +A  +  ++
Sbjct: 454 EAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILI 513

Query: 470 DRLIEAGRCHKAIQLFRRAIVE-----KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
             +    R   A+ L  +A           LD ++Y+  I GL + GR  EA   + +M 
Sbjct: 514 HGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMI 573

Query: 525 HIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
              V P+  TY ++L    K +++  ++ L   V+D  ++L Y 
Sbjct: 574 DNGVIPDHITYSILLEGLKKSKDLHELRHL---VLDQMVQLGYR 614



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 130/494 (26%), Positives = 220/494 (44%), Gaps = 16/494 (3%)

Query: 115 CVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI 174
           C     T+   LR + RG         FDEM      PN F  +I++D L K  R    +
Sbjct: 5   CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64

Query: 175 KVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCF 230
           +  +  Q    + + + +   L  L K   +     ++  M   G  PNV  +  L++  
Sbjct: 65  RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124

Query: 231 CKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV-------Q 283
           CK      A +L   M ++  S S+  +  L+DG  R  +L+ A  L+++M+        
Sbjct: 125 CKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMD 184

Query: 284 NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
           + CSPNV+TY+ LI G  +A   S A   L+ +++ G +PD++ + +L+D L K      
Sbjct: 185 DRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAA 244

Query: 344 ALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLVCGLEVEADLVVYNALL 399
           A +V   +L+   VP+  T+ SLL  +C + R S    L+  + C      ++V Y  L+
Sbjct: 245 AWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTC-RGCTPNVVTYGTLI 303

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
              CK G    A  +   M+DKG TPD   +  L+ GLC A ++DE+I + +  V     
Sbjct: 304 DGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIK 363

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            +   +++++  L  + R  +A +L         P DV+ Y+  I GL + G+ +EA+ L
Sbjct: 364 PDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDL 423

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK 579
           Y  M       +  TY  ++   CK   +     LL  ++         T   L K +  
Sbjct: 424 YEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCD 483

Query: 580 FHSSSSAVNQLVEM 593
            +    A+  + EM
Sbjct: 484 LNHLDEAIELVEEM 497



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 103/414 (24%), Positives = 178/414 (42%), Gaps = 32/414 (7%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+  ++   L   C+  ++   +     M  K   PNV +  IL++  CK  R  +A + 
Sbjct: 7   PDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRC 66

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
              M   G       +T L+ G  + +RLD A  +  +M  +GC PNVVTY SLI G  +
Sbjct: 67  FRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCK 126

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
                 A    + ++S   +P +V +N L+D L + G  + A+ ++  +L+ +   D   
Sbjct: 127 NNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRR-SHDMDD 185

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
            CS                         +++ Y+ L+   CKA   +QAV+L  +M  +G
Sbjct: 186 RCS------------------------PNVITYSVLIDGLCKANRVSQAVELLESMKARG 221

Query: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI 482
            +PD  ++  L+ GLC   K+  A  V + ++      N   + +++  L  A R   A+
Sbjct: 222 CSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDAL 281

Query: 483 QLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
            L R         +VV+Y   I GL + GR ++A  + + M      P+   Y +++   
Sbjct: 282 ALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGL 341

Query: 543 CKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNL 596
           CK   +     LL+  +   I+ D  T    +  I+    S    N+L E C L
Sbjct: 342 CKADQVDESIALLRRAVSGGIKPDVVT---YSSVIYGLCRS----NRLDEACRL 388



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 79/328 (24%), Positives = 146/328 (44%), Gaps = 10/328 (3%)

Query: 286 CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL 345
           C P+V TY +L++GF        A    D + S+   P++   ++LID L K     DAL
Sbjct: 5   CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64

Query: 346 DVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYF 402
             +  +    +V D+  + +LLS +    R      ++  +     E ++V YN+L+   
Sbjct: 65  RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124

Query: 403 CKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV-------M 455
           CK   P++A +L+  M     +P   ++  LL GL    K++ A+ ++Q ++        
Sbjct: 125 CKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMD 184

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
           +  + N   ++ ++D L +A R  +A++L           DV++YT+ + GL +  +   
Sbjct: 185 DRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAA 244

Query: 516 AYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTK 575
           A+ +  +M      PN  TY  +L   C+ R +     L++D+       +  T   L  
Sbjct: 245 AWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLID 304

Query: 576 FIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
            + K      A   L +M + G  PD M
Sbjct: 305 GLCKVGRVKDACAMLADMIDKGGTPDLM 332


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 121/486 (24%), Positives = 239/486 (49%), Gaps = 45/486 (9%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLR-IYWRGEMYGMVLE 140
           D+ +F+ +I+  ++L G       +   + + G    A T    ++ +  +G+++   L 
Sbjct: 90  DLVTFNILINCFSQL-GHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIH-QALH 147

Query: 141 AFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLC 196
             D++   GF  N      +++ L K+G+    +++L+        PN + +N  + ++C
Sbjct: 148 FHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMC 207

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
           K+  V+   D+   MV KG  P+V  +  L++ FC +G++ +A  L   MI+   +  V 
Sbjct: 208 KVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVY 267

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
            +++L+DGF +  R+  A  +   M++ G  P+VVTY SL+ G+   K  + A S  + +
Sbjct: 268 TFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTM 327

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
              G   ++  +N++I+   K+   D+A++++  +    ++PD  T+ SL+  +C SG+ 
Sbjct: 328 AQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKI 387

Query: 377 SLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
           S   KLV  +    V  D + YN++L   CK    ++A+ L   M D+G  PD Y++  L
Sbjct: 388 SYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTIL 447

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           + GLC   ++ +A N+++ +                                   +V+ Y
Sbjct: 448 IDGLCKGGRLKDAQNIFEDL-----------------------------------LVKGY 472

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
            + V +YTV I+G  +    ++A  L S+M+     PNA TY +++LS  ++    M ++
Sbjct: 473 NITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEK 532

Query: 554 LLQDVI 559
           LL+++I
Sbjct: 533 LLREMI 538



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 110/481 (22%), Positives = 228/481 (47%), Gaps = 7/481 (1%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALC 193
           ++ +F+ +     TP  F    ++  L KI      I + +E +      + ++FNI + 
Sbjct: 40  LVSSFNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILIN 99

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
              +L        V   +++KG+ PN      L+   C  G+I +A      ++ LG  L
Sbjct: 100 CFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHL 159

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
           +   +  LI+G  ++ +   A  L  ++      PNVV Y ++I    + K+ + AF   
Sbjct: 160 NKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLY 219

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
             + S+G +PD+V ++ LI     +G  +DA+ +++ ++  ++ PD YTF  L+   C  
Sbjct: 220 SEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKE 279

Query: 374 GRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           GR      ++  +    ++ D+V Y +L+  +C     N+A  ++NTM   G T +  S+
Sbjct: 280 GRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSY 339

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             ++ G C  +K+DEA+N+++ +   N   +   + +++D L ++G+   A++L      
Sbjct: 340 NIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHD 399

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
              P D ++Y   +  L +  + ++A  L ++MK   + P+ YTY +++   CK   +K 
Sbjct: 400 RGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKD 459

Query: 551 VKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLL 610
            + + +D++     +  +T   + +          A+  L +M + G IP+    ++ +L
Sbjct: 460 AQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIIL 519

Query: 611 S 611
           S
Sbjct: 520 S 520



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 105/229 (45%), Gaps = 4/229 (1%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           L  +    + I   +A+ G     Q++ + +  + + +     +  F EM      P+  
Sbjct: 313 LVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVV 372

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKETQ---LP-NFLSFNIALCNLCKLNDVSNVKDVIGMM 211
             N ++D L K G++   +K++ E     +P + +++N  L  LCK + V     ++  M
Sbjct: 373 TYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKM 432

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
             +G  P++  + IL++  CK GR+ +A  +   ++  G +++V  +TV+I GF      
Sbjct: 433 KDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLF 492

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           D A  L  KM  NGC PN  TY  +I    E     +A   L  + + G
Sbjct: 493 DKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARG 541


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 132/514 (25%), Positives = 232/514 (45%), Gaps = 35/514 (6%)

Query: 151 TPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKD 206
           +P+  A  +V++ L +  R+D    VL+        P+++++N+ +  LCK   V +   
Sbjct: 4   SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 63

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
           ++  M  K   P    +  L++   K GR+ EA  +L  M+  G S ++  +TV+IDG  
Sbjct: 64  LLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLS 123

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH----A 322
           +  R++ A  ++  M+ NGC P+   YT+LIKG  ++     A++      +  H     
Sbjct: 124 KAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAV 183

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDG-LLELKLVPDSYTFCSLLSTVCLSGRFSLLPK 381
           PD+V +  LID L K G   +A  V+D   +E   +PD+ T+ S++  +C  GR     +
Sbjct: 184 PDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCE 243

Query: 382 LVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
               +     E D V Y AL+  F KA    +A ++Y  ML  G      ++  +L GLC
Sbjct: 244 RFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLC 303

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
            A ++ EA   +  +           ++A++D     G    A++LFRR +      ++V
Sbjct: 304 KAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLV 363

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN-IKMVKRLLQD 557
           SY + IRGL   G+  +AY  + ++    + P+ YT+   L   C+  + +     L + 
Sbjct: 364 SYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFES 423

Query: 558 VIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD---------------- 601
           ++      + H+   L   I +      A+    EM + G+ PD                
Sbjct: 424 MVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGR 483

Query: 602 -----EMWRKLGLLS-DETMTPVSLFDGFVPCER 629
                E++R+L   S  +  +  SL DG   CER
Sbjct: 484 VDEALEVFRELERRSAPDAWSYWSLLDGLSRCER 517



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 121/513 (23%), Positives = 216/513 (42%), Gaps = 52/513 (10%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D+ +F  +I+ + R   R +    ++    R GC     T+ +F+    + E      + 
Sbjct: 6   DMVAFTVVINGLCR-EKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET----QLPNFLSFNIALCNLCK 197
             +M      P T     ++D L K GR+D  + VL++       P   ++ + +  L K
Sbjct: 65  LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL-------------- 243
              V   + +   M+  G  P+  ++  L+   CK G+  EAY L               
Sbjct: 125 AGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVP 184

Query: 244 ----------GL----------------MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
                     GL                 +  G       +T +IDG  +L R++     
Sbjct: 185 DVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCER 244

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
           + +M   G  P+ VTY +LI GFM+AKM   A      +   G     V +N+++D L K
Sbjct: 245 FHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCK 304

Query: 338 MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVV 394
            G   +A   +  + E   V    T+ +L+   C  G  S   +L   +     E +LV 
Sbjct: 305 AGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVS 364

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA-RKIDEAINVYQGI 453
           YN ++   C+AG   +A   +  +L +   PD Y+F   L GLC     + + + +++ +
Sbjct: 365 YNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESM 424

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
           V    + N H ++ ++D +  AG    A+++FR  +      DVV +   IR L   GR 
Sbjct: 425 VSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRV 484

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVML--LSFCK 544
           +EA  ++ +++  +  P+A++Y  +L  LS C+
Sbjct: 485 DEALEVFRELERRSA-PDAWSYWSLLDGLSRCE 516



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 112/453 (24%), Positives = 196/453 (43%), Gaps = 41/453 (9%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRG----EMYGMVLEAFDEMGRFGFTP 152
            GR E  R I  ++   GC   A  +   ++   +     E Y +  EA          P
Sbjct: 125 AGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVP 184

Query: 153 NTFARNIVMDVLFKIGRVDLGIKVLKETQ-----LPNFLSFNIALCNLCKLNDVSNVKDV 207
           +      ++D L K GR+    +V  +       +P+ +++   +  LCKL  V    + 
Sbjct: 185 DVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCER 244

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
              M  +G+ P+   +  L++ F K   I +A+++   M+  GT +S   + +++DG  +
Sbjct: 245 FHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCK 304

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
             R+  A   +  M + GC   VVTY++L+ GF      S A      +   G  P+LV 
Sbjct: 305 AGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVS 364

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE 387
           +N++I  L + G    A   ++ LL+ +L PD YTF + L  +C              L+
Sbjct: 365 YNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQR------------LD 412

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
             +D                    V+L+ +M+ +G +P+ +S+  L+ G+C A  ++ A+
Sbjct: 413 TVSD-------------------GVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVAL 453

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            +++ +V    A +  V   ++  L  AGR  +A+++FR       P D  SY   + GL
Sbjct: 454 EIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRSAP-DAWSYWSLLDGL 512

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
               R EEA +L   MK     P  Y   V  L
Sbjct: 513 SRCERMEEARLLSFHMKLQGCAPRHYDLTVRFL 545



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/285 (29%), Positives = 142/285 (49%), Gaps = 10/285 (3%)

Query: 286 CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL 345
           CSP++V +T +I G    K    AFS L+     G  PD V +NV ID L K    DDA 
Sbjct: 3   CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62

Query: 346 DVYDGLLELKLVPDSYTFCSLLSTVCLSGRF----SLLPKLVCGLEVEADLVVYNALLSY 401
            +   + E K +P + T+ +L+  +  +GR     ++L ++V        L  Y  ++  
Sbjct: 63  QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMV-EKGNSPTLKTYTVVIDG 121

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVN 461
             KAG   +A +++  ML  G  PD + +  L++GLC + K +EA  +Y+          
Sbjct: 122 LSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHAT 181

Query: 462 A----HVHTAIVDRLIEAGRCHKAIQLFRRAIVEK-YPLDVVSYTVAIRGLLEGGRTEEA 516
           A      +T+++D L +AGR  +A Q+F    VE+ +  D V+YT  I GL + GR EE 
Sbjct: 182 AVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEG 241

Query: 517 YILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
              + +M++    P+A TY  ++  F K + I    R+ + ++ +
Sbjct: 242 CERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQS 286


>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
 gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
          Length = 651

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 131/515 (25%), Positives = 234/515 (45%), Gaps = 42/515 (8%)

Query: 52  IVHSTLLN--CPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGE 109
           +VH+TL+   C +  +  +   + A  +D   DV ++  ++  + +  G+F+  +G++ E
Sbjct: 45  VVHTTLMKGLCDAGRVVEALEHFRAMAKDCAPDVMTYTALVHALCK-AGKFDEAQGMLRE 103

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK-IG 168
           +   GC     TF   +                D + +FG     F   ++ DV+ + +G
Sbjct: 104 MIARGCAPDTVTFSTLI----------------DGLCKFGSEEQAF--RVLEDVIQRGMG 145

Query: 169 RVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLN 228
             D   + + +            LCN  K N V     V+G+++ KGF P V MF +++N
Sbjct: 146 NSDAAFETIIQR-----------LCN--KYNSVELASKVLGVVIAKGFTPTVLMFNLVIN 192

Query: 229 CFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSP 288
            FCK   +  AY+LL +MI  G   +V  +T+LI G  +  R+  A  L EKMV  GCSP
Sbjct: 193 GFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSP 252

Query: 289 NVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVY 348
           NVVTY+++I G  +      A+    ++E     P++V HN+LID L K    ++A  +Y
Sbjct: 253 NVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLY 312

Query: 349 DGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCK 404
             + E    PD  T+ SL+  +C S +    F L   +       A+ V Y+ L   +  
Sbjct: 313 HRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAA 372

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV 464
            G    A ++++ ++DKGF+PD  ++  L+   C   +  E + + + +         + 
Sbjct: 373 LGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNT 432

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM- 523
            +A++  L E     +AIQLF          D + Y + + G+    +  +A  +  Q+ 
Sbjct: 433 LSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVI 492

Query: 524 --KHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
             +     P++     ++ S C+       K+LL 
Sbjct: 493 DKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLH 527



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 129/568 (22%), Positives = 231/568 (40%), Gaps = 123/568 (21%)

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
           +AR+ C+    T+ + +R +       + ++  +EM   GF  N      +M  L   GR
Sbjct: 1   MARI-CMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGR 59

Query: 170 VDLGI---KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEIL 226
           V   +   + + +   P+ +++   +  LCK       + ++  M+ +G  P+   F  L
Sbjct: 60  VVEALEHFRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTL 119

Query: 227 LNCFCKMGRIAEAY------------------------------------QLLGLMITLG 250
           ++  CK G   +A+                                    ++LG++I  G
Sbjct: 120 IDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKG 179

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
            + +V  + ++I+GF + + LD A  L E M++ GC PNV T+T LI G  +A     A 
Sbjct: 180 FTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQ 239

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
             L+ + + G +P++V ++ +I+ L K G  DDA +++  L+E +  P            
Sbjct: 240 QLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQ-LMERRNCP------------ 286

Query: 371 CLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
                               ++V +N L+   CKA    +A +LY+ M + G  PD  ++
Sbjct: 287 -------------------PNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITY 327

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNN-PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
             L+ GLC + ++DEA  ++Q I  +   A NA  ++ +       GR   A ++F   +
Sbjct: 328 NSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLV 387

Query: 490 VEKYPLDVVSYT-----------------------------------VAIRGLLEGGRTE 514
            + +  D+ +YT                                     + GL EG  TE
Sbjct: 388 DKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTE 447

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLT 574
            A  L+  M       +A  Y +++    +         +L+ VID R            
Sbjct: 448 RAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDR---------- 497

Query: 575 KFIFKFHSSSSAVNQLVE-MCNLGLIPD 601
               KF+ SSSAV+ LVE +C +G   D
Sbjct: 498 ----KFNPSSSAVDALVESLCQVGRTDD 521



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 103/440 (23%), Positives = 193/440 (43%), Gaps = 19/440 (4%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG 173
           GCV    TF + +    +    G   +  ++M   G +PN    + V++ L K G+VD  
Sbjct: 214 GCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDA 273

Query: 174 IKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
            ++ +  +     PN ++ NI +  LCK   +   + +   M   G  P++  +  L++ 
Sbjct: 274 YELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDG 333

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNA--WTVLIDGFRRLRRLDMAGYLWEKMVQNGCS 287
            CK  ++ EA+QL   +   G S + NA  ++ L  G+  L R+  A  ++  +V  G S
Sbjct: 334 LCKSFQVDEAFQLFQTIPESGVS-AANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFS 392

Query: 288 PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
           P++ TYTSLI  + +          ++ + S+G  P +   + ++  L +    + A+ +
Sbjct: 393 PDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQL 452

Query: 348 YDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADL---------VVYNAL 398
           +D +       D+  +  ++  +    R S   K +  LE   D             +AL
Sbjct: 453 FDSMAARGCTDDALIYNLVVEGM---ARASKHNKALAVLEQVIDKRDRKFNPSSSAVDAL 509

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           +   C+ G  + A +L + M ++GF     S+ GLL GL   ++ DEA  V++ +V   P
Sbjct: 510 VESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGP 569

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
           A        ++  L  A +   A +L +R        D+ +    I G  + GR + A  
Sbjct: 570 APEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARK 629

Query: 519 LYSQMKHIAVPPNAYTYRVM 538
           L  +M    + PN  T+ ++
Sbjct: 630 LLEEMTEAGLEPNDTTHDLL 649



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/229 (21%), Positives = 103/229 (44%), Gaps = 7/229 (3%)

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
           +A  G   +  T    L   + G      ++ FD M   G T +    N+V++ + +  +
Sbjct: 421 MASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASK 480

Query: 170 VDLGIKVLKETQLPNFLSFNIA-------LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
            +  + VL++        FN +       + +LC++    + K ++  M  +GF   V  
Sbjct: 481 HNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSS 540

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           +  LL+   ++ R  EA Q+   M++ G +  ++   V+I       ++D A  L ++M 
Sbjct: 541 YNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMS 600

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           + GC P++ T  +LI G+ ++    +A   L+ +   G  P+   H++L
Sbjct: 601 KLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 649


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 212/443 (47%), Gaps = 18/443 (4%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNL 195
           E  +EM  FGF P+  A + ++D L K G +    DL  KV K    P+   +N  + ++
Sbjct: 306 EMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSM 365

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
           CK   +   + +   M  KG +PN   + IL++ FCK G++  A   LG M  +G   +V
Sbjct: 366 CKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATV 425

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
             ++ LI G  +L +L  A  L+++M+ NG  PNVV YTSLI G+ +      AF     
Sbjct: 426 YPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHE 485

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
           +  +G +P+      LI  L       +A  ++  ++E  ++P+  T+  L+   C  G 
Sbjct: 486 MTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGN 545

Query: 376 ----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD--------KGF 423
               F LL ++V    V  D   Y  L+S  C  G  ++A +  N +          +G 
Sbjct: 546 TVRAFELLDEMVEKGLV-PDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGC 604

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
            P+  ++  L+ GLC    +D+A  + + ++ +N   N + +   +D L   G   KAIQ
Sbjct: 605 LPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQ 664

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           L    ++E +  + V+Y + IRG  + GR +EA  +   M    + P+  +Y  ++  +C
Sbjct: 665 L-HDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYC 723

Query: 544 KERNIKMVKRLLQDVIDARIELD 566
           +  ++K   +L + +++  +  D
Sbjct: 724 RRGDLKEAIKLWESMLNRGVNPD 746



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 123/550 (22%), Positives = 235/550 (42%), Gaps = 38/550 (6%)

Query: 48  LAPHIVHSTLLNCPSD-LIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLT--------- 97
           L PH V   L+    D  +AL FF +    +++ H   SF  +I  + +           
Sbjct: 57  LKPHHVEKVLIQTLDDSRLALRFFNFLGLHKNFDHSTTSFCILIHALVQSNLYWPASSLL 116

Query: 98  -----------GRFETVRGIVGELARVGCVIKAQTFLLFLRIYW--RGEMYGMVLEAFDE 144
                      G FE+      +  R         F L ++ Y   R E+ G+V+     
Sbjct: 117 QTLLLRGLNPEGLFESFL----DSYRKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRL-- 170

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLND 200
           M   G  P     + V++ L +I +  + + +  E       P+   +   + +LC+L D
Sbjct: 171 MMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKD 230

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
               ++VIG M   G   +V  + + +   CK  R+ EA ++  L+   G    V  +  
Sbjct: 231 FIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCT 290

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           L+ G  ++   +    +  +M++ G  P+    ++L+ G  +      AF  ++ ++  G
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL-- 378
            AP L  +N LI+ + K G  D+A  +++ +    L P+  T+  L+ + C  G+  +  
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVAL 410

Query: 379 --LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
             L K+   + ++A +  Y++L+S  CK G    A  L++ M+  G  P+   +  L+ G
Sbjct: 411 HFLGKMT-EVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISG 469

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
            C   ++  A  +Y  +     + N +  TA++  L  A R  +A +LF   +      +
Sbjct: 470 YCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPN 529

Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
            V+Y V I G  + G T  A+ L  +M    + P+ YTYR ++   C    +   +  + 
Sbjct: 530 EVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMN 589

Query: 557 DVIDARIELD 566
           D+   + +L+
Sbjct: 590 DLQGEQQKLN 599



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/427 (23%), Positives = 185/427 (43%), Gaps = 38/427 (8%)

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
           RK  +     F++L+  + +  R  +   ++ LM+  G    +   + +++G  R+R+  
Sbjct: 138 RKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFR 197

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
           MA +L++++V +G  P+V  YT++++   E K F  A   +  +ES G    +  +NV I
Sbjct: 198 MALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFI 257

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF---------------- 376
             L K     +A+++ + L    L  D  T+C+L+  +C    F                
Sbjct: 258 RGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFV 317

Query: 377 ---SLLPKLVCGLE-------------------VEADLVVYNALLSYFCKAGFPNQAVKL 414
              + +  LV GL                    V   L VYNAL++  CK G  ++A  L
Sbjct: 318 PSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESL 377

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
           +N M  KG  P++ ++  L+   C   K+D A++    +         + +++++    +
Sbjct: 378 FNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCK 437

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
            G+   A  LF   I      +VV YT  I G  + G    A+ LY +M    + PN YT
Sbjct: 438 LGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYT 497

Query: 535 YRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMC 594
           +  ++   C    +    +L  ++++  +  +  T   L +   K  ++  A   L EM 
Sbjct: 498 FTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMV 557

Query: 595 NLGLIPD 601
             GL+PD
Sbjct: 558 EKGLVPD 564



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 66/308 (21%), Positives = 127/308 (41%), Gaps = 14/308 (4%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           +  +F  +IS +     R      + GE+     +    T+ + +  + +        E 
Sbjct: 494 NTYTFTALISGLCH-ANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFEL 552

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ------------LPNFLSFN 189
            DEM   G  P+T+    ++  L   GRV    + + + Q            LPN +++ 
Sbjct: 553 LDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYT 612

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
             +  LCK+  +   + +   M+     PN   +   L+     G I +A QL  +++  
Sbjct: 613 ALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE- 671

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           G   +   + +LI GF +L R+  A  +   M+ +G SP+ ++Y+++I  +        A
Sbjct: 672 GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEA 731

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
               + + + G  PD V +N LI      G    A ++ D ++   + P+  T+ SL+  
Sbjct: 732 IKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHG 791

Query: 370 VCLSGRFS 377
            CL    S
Sbjct: 792 TCLMSSVS 799



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 113/253 (44%), Gaps = 20/253 (7%)

Query: 102 TVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVM 161
           T R ++  L   G V +A+ F+  L+    GE      +  +E+   G  PN      ++
Sbjct: 567 TYRPLISGLCSTGRVSEAREFMNDLQ----GEQ-----QKLNEIE--GCLPNVVTYTALI 615

Query: 162 DVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGM--MVRKG 215
           + L KIG +D    L  ++L    LPN    N   C L  L    N++  I +  ++ +G
Sbjct: 616 NGLCKIGLMDKAELLCREMLASNSLPNQ---NTYACFLDYLTSEGNIEKAIQLHDVLLEG 672

Query: 216 FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAG 275
           F  N   + IL+  FCK+GRI EA ++L  MI  G S    +++ +I  + R   L  A 
Sbjct: 673 FLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAI 732

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
            LWE M+  G +P+ V Y  LI G       + AF   D +   G  P+   +N LI   
Sbjct: 733 KLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGT 792

Query: 336 SKMGSYDDALDVY 348
             M S     D +
Sbjct: 793 CLMSSVSSTADYF 805



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 97/229 (42%), Gaps = 22/229 (9%)

Query: 74  AKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGE 133
           ++ R++ +D+Q     ++ +        T   ++  L ++G + KA+   L  R      
Sbjct: 582 SEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAE---LLCR------ 632

Query: 134 MYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIK---VLKETQLPNFLSFNI 190
                     EM      PN       +D L   G ++  I+   VL E  L N +++NI
Sbjct: 633 ----------EMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNI 682

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +   CKL  +    +V+  M+  G  P+   +  ++  +C+ G + EA +L   M+  G
Sbjct: 683 LIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRG 742

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG 299
            +    A+  LI G      L  A  L + M++ G  PN  TY SLI G
Sbjct: 743 VNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHG 791


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 154/628 (24%), Positives = 271/628 (43%), Gaps = 63/628 (10%)

Query: 57  LLNCPSDL-IALSFFIWCAKQRDYFHDVQSFDHMISVVTRL--TGRFETVRGIVGELARV 113
           LL  P D+  ++  F W   Q+ Y H    FD    ++ +L   G F+T   ++ ++ + 
Sbjct: 102 LLELPLDVPTSMELFQWAGTQKGYCH---MFDVYYMLIDKLGAAGEFKTTDALLMQMKQE 158

Query: 114 GCVIKAQTFLLFLRIYWRGEM-----------------------YGMVLE---------- 140
           G V +   F+L ++ Y R  +                       Y +VL+          
Sbjct: 159 GIVFRESLFILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKV 218

Query: 141 ---AFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALC 193
               F EM   G +P  +   +VM  L  +  VD    +LK+      +PN + +   + 
Sbjct: 219 VPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIH 278

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
            L K+  V+ V  ++  M+  G  P+V  F   ++  CKM RI EA +L+  M+  G + 
Sbjct: 279 ALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTP 338

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
           +   + VL+ G  R+ ++D A  L  K+     +PNVV + +LI G++       A + +
Sbjct: 339 NSFTYGVLMHGLCRMGKVDEARMLLNKVP----NPNVVLFNTLINGYVSRGRLDEAKAVM 394

Query: 314 -DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
            + + S G  PD+  +N LI  L K G    A ++ + +      P+  T+  L+   C 
Sbjct: 395 HESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCK 454

Query: 373 SGRFSLLPKLV---CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
            GR      ++    G  +  + V YN L+S  CK      A+ ++  M  KG  PD ++
Sbjct: 455 EGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFT 514

Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
           F  L+ GLC   K +EA+ +YQ +++     N   +  ++   +  G   +A++L    +
Sbjct: 515 FNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDML 574

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
               PLD ++Y   I+ L   G  E+   L+  M    + PN  +  +++   C+  NI+
Sbjct: 575 FRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQ 634

Query: 550 MVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM------ 603
                L+D+I   +  D  T   L   + K   +  A+N   ++   G+ PD +      
Sbjct: 635 HALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLI 694

Query: 604 -WR-KLGLLSDETMTPVSLFD-GFVPCE 628
            W  K G+  D  +      D GF+P E
Sbjct: 695 SWHCKEGMFDDAHLLLSRGVDSGFIPNE 722



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 123/473 (26%), Positives = 218/473 (46%), Gaps = 22/473 (4%)

Query: 84  QSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTF-------LLFLRIYWRGEMYG 136
           Q+  H +S V    GR   V  ++ E+  +GC+    TF          LRI+   ++  
Sbjct: 274 QTLIHALSKV----GRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKL-- 327

Query: 137 MVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLC 196
                 D M   GFTPN+F   ++M  L ++G+VD    +L +   PN + FN  +    
Sbjct: 328 -----VDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYV 382

Query: 197 KLNDVSNVKDVI-GMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
               +   K V+   M+  G  P++  +  L+   CK G +  A +L+  M   G   +V
Sbjct: 383 SRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNV 442

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
             +T+LID F +  RL+ A  + ++M   G + N V Y  LI    + +    A +    
Sbjct: 443 ITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGD 502

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
           + S+G  PD+   N LI  L K+  +++AL +Y  +L   ++ ++ T+ +L+      G 
Sbjct: 503 MSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGA 562

Query: 376 FSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
                KLV  +       D + YN L+   C+AG   + + L+  M+ KG  P+N S   
Sbjct: 563 MQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNI 622

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           L+ GLC    I  A+   + ++      +   + ++++ L + GR  +A+ LF +  VE 
Sbjct: 623 LINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEG 682

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
              D ++Y   I    + G  ++A++L S+       PN  T+ +++ +F KE
Sbjct: 683 ICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKE 735



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 125/281 (44%), Gaps = 4/281 (1%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR E  R ++ E++  G  + A  +   +    + E     L  F +M   G  P+ F  
Sbjct: 456 GRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTF 515

Query: 158 NIVMDVLFKIGRVD--LGI--KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N ++  L K+ + +  LG+   +L E  + N +++N  +    +   +     ++  M+ 
Sbjct: 516 NSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLF 575

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +G   +   +  L+   C+ G I +   L   M++ G + +  +  +LI+G  R   +  
Sbjct: 576 RGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQH 635

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A      M+  G +P++VTY SLI G  +      A +  D L+ EG  PD + +N LI 
Sbjct: 636 ALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLIS 695

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
              K G +DDA  +    ++   +P+  T+  L+S     G
Sbjct: 696 WHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 736


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 129/498 (25%), Positives = 223/498 (44%), Gaps = 44/498 (8%)

Query: 115 CVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI 174
           C+I  Q   L   I   G+ Y  V+    +M   G +PN +  +I+++    + RVDL  
Sbjct: 96  CII--QFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAF 153

Query: 175 ----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCF 230
               K++K    P  ++F   +  LCK+   +   ++   MV +G  P+V  +  ++N  
Sbjct: 154 SVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGL 213

Query: 231 CKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNV 290
           CK+G  A A  LL  M   G   +V  ++ +ID  R+ RR++ A  ++  M   G SP++
Sbjct: 214 CKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDI 273

Query: 291 VTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDG 350
            TY SLI+G      +  A + L+ + S    PD+V  NVL+D + K G   +A  V   
Sbjct: 274 FTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKT 333

Query: 351 LLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGF 407
           + E+ + PD  T+ SL+    L        KL   +  +    D+  YN L++ +CK   
Sbjct: 334 MTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKR 393

Query: 408 PNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTA 467
            ++A +L+N M+ +G TP+N S+  L+ GLC    + EA N+++ +  N    N   ++ 
Sbjct: 394 IDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSI 453

Query: 468 IVDRLIEAGRCHKAIQLFR-----------------------------------RAIVEK 492
           ++D   + G   KA +LFR                                      V+ 
Sbjct: 454 LLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKG 513

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVK 552
              +   YT  I GL + G  +EA   +  M+    PP+  +Y V++  F   ++     
Sbjct: 514 LQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAV 573

Query: 553 RLLQDVIDARIELDYHTS 570
           +L+ ++ D     D  T+
Sbjct: 574 QLIGEMRDKGFIADVGTT 591



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/433 (23%), Positives = 198/433 (45%), Gaps = 7/433 (1%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           R +    ++ ++ ++G      TF   +    +   +   +E FD+M   G  P+ +   
Sbjct: 148 RVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYT 207

Query: 159 IVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
            +++ L KIG       +LK+ +     PN ++++  + +  K   V+   D+   M  K
Sbjct: 208 TIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVK 267

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           G  P++  +  L+   C   +  EA  LL  M +L     +  + VL+D   +  ++  A
Sbjct: 268 GISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEA 327

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             + + M + G  P+VVTY+SL+ G+        A    D + ++G  PD+  +N+LI+ 
Sbjct: 328 QGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILING 387

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---D 391
             K+   D+A  +++ ++   L P++ ++ +L+  +C  G       L   +       +
Sbjct: 388 YCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPN 447

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
           L  Y+ LL  FCK G+  +A +L+  M      P+   +  L+  +C +  + +A  ++ 
Sbjct: 448 LFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFS 507

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
            + +     NA ++T I++ L + G   +A++ FR    +  P D +SY V IRG L   
Sbjct: 508 ELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHK 567

Query: 512 RTEEAYILYSQMK 524
               A  L  +M+
Sbjct: 568 DESRAVQLIGEMR 580



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 123/258 (47%), Gaps = 11/258 (4%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D+ +F+ ++  + +  G+    +G++  +  +G      T+   +  Y    +   V+EA
Sbjct: 307 DIVTFNVLVDTICK-EGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGY---SLRSEVVEA 362

Query: 142 ---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET----QLPNFLSFNIALCN 194
              FD M   G  P+ F+ NI+++   K+ R+D   ++  E       PN +S+N  +  
Sbjct: 363 RKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHG 422

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           LC+L  +   +++   M   G  PN+  + ILL+ FCK G   +A++L   M +  +  +
Sbjct: 423 LCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPN 482

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           +  + +LID   +   L  A  L+ ++   G  PN   YT++I G  +  +   A     
Sbjct: 483 LVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFR 542

Query: 315 MLESEGHAPDLVFHNVLI 332
            +E +G  PD + +NV+I
Sbjct: 543 NMEEDGCPPDEISYNVII 560



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/268 (22%), Positives = 121/268 (45%), Gaps = 41/268 (15%)

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-------------------------- 375
           DDAL  ++ +L  K +P    F  LLS +   G+                          
Sbjct: 79  DDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSI 138

Query: 376 --------------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
                         FS+L K++  L ++  +V +  L+++ CK G   QA++L++ M+ +
Sbjct: 139 LINCFSHLQRVDLAFSVLAKII-KLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVAR 197

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
           G  PD Y++  ++ GLC   +   A  + + +       N   ++ I+D   +  R ++A
Sbjct: 198 GCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEA 257

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
           + +F    V+    D+ +Y   I+GL    + +EA  L ++M+ + + P+  T+ V++ +
Sbjct: 258 LDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDT 317

Query: 542 FCKERNIKMVKRLLQDVIDARIELDYHT 569
            CKE  +   + +L+ + +  +E D  T
Sbjct: 318 ICKEGKVSEAQGVLKTMTEMGVEPDVVT 345


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 126/478 (26%), Positives = 220/478 (46%), Gaps = 39/478 (8%)

Query: 67  LSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFL 126
           ++FF W   Q  Y H   S+++++ V+ + +GR + V G   ++   GCV    T+   L
Sbjct: 1   MAFFQWAGSQVHYNHGTLSYNYLLEVLAK-SGRCDHVYGTYNDMLGAGCVPNTYTYGYLL 59

Query: 127 RIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFL 186
           R   + + +      F  M   G +PN F                               
Sbjct: 60  RSLCQAQRFEEARSVFRGMAAQGCSPNVF------------------------------- 88

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           S++I +  LC+   V    +++  M+  G  PNV  +  LL+  CKMG++ EA  L   M
Sbjct: 89  SYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRM 148

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
           +  G       + VLIDGF +   +  A  L+E+M++ GC P V TY SL+ GF     F
Sbjct: 149 VYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEF 208

Query: 307 SIAFS-FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
               S F DML  +G  P++   N L+D   KMG   +A  ++  +  L   PD  ++ +
Sbjct: 209 GRVQSLFKDMLR-QGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNT 267

Query: 366 LLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
           L+  +C  G+     +L+  +    V  D+V YN L+  + K+G  + A+KL+  +   G
Sbjct: 268 LMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSG 327

Query: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI 482
             PD +S+  ++  LC A K+  A  V++ ++ N  A +A V   +V  L    R  ++ 
Sbjct: 328 LEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESC 387

Query: 483 QLFRRAI-VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
           +LF+  +  E  PL +  Y + +  L +  R+++   ++ ++      P+    +V+L
Sbjct: 388 ELFQAMVKFECVPL-IPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVIL 444



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 170/377 (45%), Gaps = 3/377 (0%)

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGL 245
           LS+N  L  L K     +V      M+  G  PN   +  LL   C+  R  EA  +   
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           M   G S +V ++++LI G  R +++D A  L  +M+  G  PNVVTY SL+ G  +   
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
              A      +   G  PD V +NVLID  SK G   +A  +++ +LE   +P  +T+ S
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 366 LLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
           LLS     G F  +  L   +  +    ++  +N LL  FCK G   +A +L+  M   G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257

Query: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI 482
             PD  S+  L+RG+C   K  EA  + + ++ +    +   +  ++D   ++G    AI
Sbjct: 258 CPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAI 317

Query: 483 QLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
           +LF          D  SY+  I  L   G+   A++++  M      P+A     +++  
Sbjct: 318 KLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGL 377

Query: 543 CKERNIKMVKRLLQDVI 559
           C+   +     L Q ++
Sbjct: 378 CRGERLTESCELFQAMV 394



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 88/166 (53%)

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           YN LL    K+G  +     YN ML  G  P+ Y++  LLR LC A++ +EA +V++G+ 
Sbjct: 20  YNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMA 79

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
               + N   ++ ++  L    +  +A +L    I   +  +VV+Y   + GL + G+ +
Sbjct: 80  AQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLK 139

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
           EA  L+S+M +   PP+   Y V++  F K+ ++    RL +++++
Sbjct: 140 EAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLE 185



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/262 (22%), Positives = 117/262 (44%), Gaps = 11/262 (4%)

Query: 83  VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA- 141
           V +++ ++S  +R  G F  V+ +  ++ R GCV    TF   L  + +    G ++EA 
Sbjct: 192 VFTYNSLLSGFSR-KGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCK---MGDMVEAH 247

Query: 142 --FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNL 195
             F EM   G  P+  + N +M  +   G+     ++L+E       P+ +S+NI +   
Sbjct: 248 RLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGY 307

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
            K   + +   +   + + G  P+   +  +++C C+ G++  A+ +   MI  G++   
Sbjct: 308 SKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDA 367

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
                L+ G  R  RL  +  L++ MV+  C P +  Y  L+    +AK           
Sbjct: 368 AVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHE 427

Query: 316 LESEGHAPDLVFHNVLIDCLSK 337
           L   G +PD+    V+++ L +
Sbjct: 428 LTERGFSPDVEISKVILETLRR 449



 Score = 47.8 bits (112), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 29/137 (21%), Positives = 57/137 (41%)

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
           +  +++ L ++GRC      +   +      +  +Y   +R L +  R EEA  ++  M 
Sbjct: 20  YNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMA 79

Query: 525 HIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSS 584
                PN ++Y +++   C+ + +     LL ++ID   + +  T   L   + K     
Sbjct: 80  AQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLK 139

Query: 585 SAVNQLVEMCNLGLIPD 601
            AV+    M   G  PD
Sbjct: 140 EAVDLFSRMVYRGCPPD 156


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/458 (25%), Positives = 223/458 (48%), Gaps = 46/458 (10%)

Query: 136 GMVLEAF---DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSF 188
           G + +AF   D++   GF  +  +   ++  L K+G     + +L+        PN + +
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           N  + ++CK+  V+   D+   MV KG  P+V  +  L++ FC +G++ +A  L   MI 
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMIL 288

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
                 V  + +L++ F +  ++     +++ M++ G  PN VTY SL+ G+   K  + 
Sbjct: 289 ENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNK 348

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A S  + +   G  PD+  ++++I+   K+  +D+A++++  +    ++PD  T+ SL+ 
Sbjct: 349 AKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLID 408

Query: 369 TVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
            +  SGR S   +LV  +    V  ++  YN++L   CK    ++A+ L     DKGF P
Sbjct: 409 GLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQP 468

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           D  ++  L++GLC                                   ++G+   A ++F
Sbjct: 469 DISTYSILIKGLC-----------------------------------QSGKLEDARKVF 493

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
              +V+ Y LDV +YT+ I+G    G   EA  L S+M+     P+A TY +++LS  K+
Sbjct: 494 EDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKK 553

Query: 546 RNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSS 583
               M ++LL+++I   + L+++  + LT+    +H +
Sbjct: 554 DENDMAEKLLREMIARGLPLNFY-DLYLTRLAQTWHGT 590



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 113/478 (23%), Positives = 230/478 (48%), Gaps = 9/478 (1%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
           F+ + R   TP  F  N ++  L K       + + ++ +     PN ++ NI +   C+
Sbjct: 73  FNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQ 132

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
           L  +     V   +++ G+ P+   F  L    C  G+I +A+     ++ LG      +
Sbjct: 133 LGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQIS 192

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  LI G  ++     A  L +++  N   PNVV Y ++I    + K+ + AF     + 
Sbjct: 193 YGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMV 252

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF- 376
           S+G +PD+V ++ LI     +G   DA+D+++ ++   + PD YTF  L++  C  G+  
Sbjct: 253 SKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMK 312

Query: 377 --SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
               +  ++    ++ + V YN+L+  +C     N+A  ++NTM   G  PD  S+  ++
Sbjct: 313 EGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMI 372

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            G C  +K DEA+N+++ +   N   +   +++++D L ++GR   A+QL  +      P
Sbjct: 373 NGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVP 432

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
            ++ +Y   +  L +  + ++A  L ++ K     P+  TY +++   C+   ++  +++
Sbjct: 433 PNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKV 492

Query: 555 LQDVIDARIELD-YHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLS 611
            +D++     LD Y  +I +  F  +    + A+  L +M + G IPD    ++ +LS
Sbjct: 493 FEDLLVKGYNLDVYAYTIMIQGFCVE-GLFNEALALLSKMEDNGCIPDAKTYEIIILS 549



 Score = 45.4 bits (106), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 38/211 (18%), Positives = 88/211 (41%)

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           + + Y++  + F      + AV L+N +L +  TP  + F  +L  L  ++     + + 
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
           Q +       N      +++   + G    A  +F + +   Y  D +++T   +GL   
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLK 168

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
           G+ ++A++ + ++  +    +  +Y  ++   CK    +    LLQ V    ++ +    
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 571 IRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
             +   + K    + A +   EM + G+ PD
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMVSKGISPD 259


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 126/478 (26%), Positives = 220/478 (46%), Gaps = 39/478 (8%)

Query: 67  LSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFL 126
           ++FF W   Q  Y H   S+++++ V+ + +GR + V G   ++   GCV    T+   L
Sbjct: 1   MAFFQWAGSQVHYNHGTLSYNYLLEVLAK-SGRCDHVYGTYNDMLAAGCVPNTYTYGYLL 59

Query: 127 RIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFL 186
           R   + + +      F  M   G +PN F                               
Sbjct: 60  RSLCQAQRFEEARSVFRGMAAQGCSPNVF------------------------------- 88

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           S++I +  LC+   V    +++  M+  G  PNV  +  LL+  CKMG++ EA  L   M
Sbjct: 89  SYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRM 148

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
           +  G       + VLIDGF +   +  A  L+E+M++ GC P V TY SL+ GF     F
Sbjct: 149 VYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEF 208

Query: 307 SIAFS-FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
               S F DML  +G  P++   N L+D   KMG   +A  ++  +  L   PD  ++ +
Sbjct: 209 GRVQSLFKDMLR-QGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNT 267

Query: 366 LLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
           L+  +C  G+     +L+  +    V  D+V YN L+  + K+G  + A+KL+  +   G
Sbjct: 268 LIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSG 327

Query: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI 482
             PD +S+  ++  LC A K+  A  V++ ++ N  A +A V   +V  L    R  ++ 
Sbjct: 328 LEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESC 387

Query: 483 QLFRRAI-VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
           +LF+  +  E  PL +  Y + +  L +  R+++   ++ ++      P+    +V+L
Sbjct: 388 ELFQAMVKFECVPL-IPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVIL 444



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 170/377 (45%), Gaps = 3/377 (0%)

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGL 245
           LS+N  L  L K     +V      M+  G  PN   +  LL   C+  R  EA  +   
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           M   G S +V ++++LI G  R +++D A  L  +M+  G  PNVVTY SL+ G  +   
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
              A      +   G  PD V +NVLID  SK G   +A  +++ +LE   +P  +T+ S
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 366 LLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
           LLS     G F  +  L   +  +    ++  +N LL  FCK G   +A +L+  M   G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257

Query: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI 482
             PD  S+  L+RG+C   K  EA  + + ++ +    +   +  ++D   ++G    AI
Sbjct: 258 CPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAI 317

Query: 483 QLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
           +LF          D  SY+  I  L   G+   A++++  M      P+A     +++  
Sbjct: 318 KLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGL 377

Query: 543 CKERNIKMVKRLLQDVI 559
           C+   +     L Q ++
Sbjct: 378 CRGERLTESCELFQAMV 394



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 88/166 (53%)

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           YN LL    K+G  +     YN ML  G  P+ Y++  LLR LC A++ +EA +V++G+ 
Sbjct: 20  YNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMA 79

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
               + N   ++ ++  L    +  +A +L    I   +  +VV+Y   + GL + G+ +
Sbjct: 80  AQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLK 139

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
           EA  L+S+M +   PP+   Y V++  F K+ ++    RL +++++
Sbjct: 140 EAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLE 185



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/269 (22%), Positives = 119/269 (44%), Gaps = 11/269 (4%)

Query: 83  VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA- 141
           V +++ ++S  +R  G F  V+ +  ++ R GCV    TF   L  + +    G ++EA 
Sbjct: 192 VFTYNSLLSGFSR-KGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCK---MGDMVEAH 247

Query: 142 --FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNL 195
             F EM   G  P+  + N ++  +   G+     ++L+E       P+ +S+NI +   
Sbjct: 248 RLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGY 307

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
            K   + +   +   + + G  P+   +  +++C C+ G++  A+ +   MI  G++   
Sbjct: 308 SKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDA 367

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
                L+ G  R  RL  +  L++ MV+  C P +  Y  L+    +AK           
Sbjct: 368 AVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHE 427

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
           L   G +PD+    V+++ L +    D A
Sbjct: 428 LTERGFSPDVEISKVILETLRRSDDKDAA 456



 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 29/137 (21%), Positives = 57/137 (41%)

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
           +  +++ L ++GRC      +   +      +  +Y   +R L +  R EEA  ++  M 
Sbjct: 20  YNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMA 79

Query: 525 HIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSS 584
                PN ++Y +++   C+ + +     LL ++ID   + +  T   L   + K     
Sbjct: 80  AQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLK 139

Query: 585 SAVNQLVEMCNLGLIPD 601
            AV+    M   G  PD
Sbjct: 140 EAVDLFSRMVYRGCPPD 156


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 129/512 (25%), Positives = 238/512 (46%), Gaps = 10/512 (1%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF-DEMGRFGFTPNTFA 156
           G F+ + G+V E+ R G    A     F+  Y R   +   ++   +++  FG   +T  
Sbjct: 103 GAFDLMEGLVREMRREGHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAV 162

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N +++VL +  R+ L   V  E       P+ ++ N  +  LC+ + V     ++  M 
Sbjct: 163 YNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMS 222

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL- 271
                P+   F  L+  F + G I  A ++   M+  G S +     VLI+G+ ++ R+ 
Sbjct: 223 SHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVE 282

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           D  GY+ +K + +G  P+ VTY + +    +    S A   +D++  EGH PD+  +N +
Sbjct: 283 DALGYI-QKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTV 341

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA- 390
           I+CLSK G  D+A  + + +++   +PD+ TF +L+  +C   R      L   L V+  
Sbjct: 342 INCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGL 401

Query: 391 --DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
             D+  +N L++  CK G P+  ++L+  M   G  PD  ++  L+  LC   K+  A++
Sbjct: 402 SPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALD 461

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           + + +  N    +   +  I+D L +  R  +A ++F +          V++   I GL 
Sbjct: 462 LLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLC 521

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
           +  R ++A  L  QM    + P+  TY  +L  +CK+ ++K    +L+ +     E+D  
Sbjct: 522 KAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVV 581

Query: 569 TSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           T   L   + K   +  A+  L  M   G+ P
Sbjct: 582 TYGTLINGLCKAGRTQVALKLLRGMRIKGIRP 613



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 116/532 (21%), Positives = 225/532 (42%), Gaps = 17/532 (3%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D   ++H+++V+     R + +  +  E+   G      T    ++   R       +  
Sbjct: 159 DTAVYNHLLNVLAE-GSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLM 217

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV---LKETQL-PNFLSFNIALCNLCK 197
            +EM      P+      +M    + G ++  ++V   + ET   P  ++ N+ +   CK
Sbjct: 218 LEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCK 277

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
           +  V +    I   +  GF P+   +   ++C C+ G ++ A +++ LM+  G    V  
Sbjct: 278 MGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFT 337

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  +I+   +   LD A  +  +MV  GC P+  T+ +LI           A      L 
Sbjct: 338 YNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELT 397

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
            +G +PD+   N+LI+ L K+G     + +++ +      PD  T+  L+  +C  G+  
Sbjct: 398 VKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLV 457

Query: 378 LLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
               L+  +E        V YN ++   CK     +A ++++ M   G +    +F  L+
Sbjct: 458 NALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLI 517

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            GLC A++ID+A  + + +V      +   + +I+    + G   KA  +        + 
Sbjct: 518 DGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFE 577

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
           +DVV+Y   I GL + GRT+ A  L   M+   + P    Y  ++ S  +  N++    L
Sbjct: 578 IDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSL 637

Query: 555 LQDVIDARIELDYHTSIRLTKFIFK-----FHSSSSAVNQLVEMCNLGLIPD 601
            +++ +     D  T     K +F+           A + LVEM N G +P+
Sbjct: 638 FREMTEVGEPPDALTY----KIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPE 685



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 108/446 (24%), Positives = 186/446 (41%), Gaps = 37/446 (8%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR E   G + +    G      T+  F+    +       L+  D M + G  P+ F  
Sbjct: 279 GRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTY 338

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N V++ L K G +D    ++ +      LP+  +FN  +  LC  N +    D+   +  
Sbjct: 339 NTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTV 398

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           KG  P+V  F IL+N  CK+G      +L   M + G +     + +LID    + +L  
Sbjct: 399 KGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVN 458

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L ++M  NGC  + VTY ++I    +      A    D +++ G +   V  N LID
Sbjct: 459 ALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLID 518

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLV 393
            L K    DDA ++ + +++  L P + T                               
Sbjct: 519 GLCKAKRIDDATELIEQMVKEGLQPSNIT------------------------------- 547

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            YN++L+++CK G   +A  +  TM   GF  D  ++  L+ GLC A +   A+ + +G+
Sbjct: 548 -YNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGM 606

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
            +         +  ++  L        A+ LFR       P D ++Y +  RGL  GG  
Sbjct: 607 RIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGP 666

Query: 514 -EEAYILYSQMKHIAVPPNAYTYRVM 538
            +EA+    +M +    P   ++R++
Sbjct: 667 IKEAFDFLVEMVNKGFMPEFSSFRML 692



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 174/371 (46%), Gaps = 11/371 (2%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
           Q  +  DV +++ +I+ +++  G  +  +GIV ++   GC+    TF   +         
Sbjct: 328 QEGHDPDVFTYNTVINCLSK-NGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRL 386

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIA 191
              L+   E+   G +P+ +  NI+++ L K+G   LGI++ +E +     P+ +++NI 
Sbjct: 387 EEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNIL 446

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           + +LC +  + N  D++  M   G   +   +  +++  CK  RI EA ++   M   G 
Sbjct: 447 IDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGI 506

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
           S S   +  LIDG  + +R+D A  L E+MV+ G  P+ +TY S++  + +      A  
Sbjct: 507 SRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAAD 566

Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL--ELKLVPDSYT--FCSLL 367
            L+ + + G   D+V +  LI+ L K G    AL +  G+    ++  P +Y     SL 
Sbjct: 567 ILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLF 626

Query: 368 STVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFP-NQAVKLYNTMLDKGFTPD 426
               L    SL  ++    E   D + Y  +    C+ G P  +A      M++KGF P+
Sbjct: 627 RRNNLRDALSLFREMTEVGE-PPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPE 685

Query: 427 NYSFVGLLRGL 437
             SF  L  GL
Sbjct: 686 FSSFRMLAEGL 696



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/394 (18%), Positives = 147/394 (37%), Gaps = 33/394 (8%)

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           + R+ F P+  ++E ++      G       L+  M   G           ++ + RLRR
Sbjct: 80  LAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFVESYARLRR 139

Query: 271 LDMAGYLWEKMVQN-GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHN 329
            D A  L    +   G   +   Y  L+    E     +  S  + +   G  PD+V  N
Sbjct: 140 FDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLN 199

Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE 389
            LI  L +      A+ + + +    + PD  TF +L+                      
Sbjct: 200 TLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQG-------------------- 239

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
                       F + G    A+++   M++ G +P   +   L+ G C   ++++A+  
Sbjct: 240 ------------FIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGY 287

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
            Q  + +    +   +   V  L + G    A+++    + E +  DV +Y   I  L +
Sbjct: 288 IQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSK 347

Query: 510 GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
            G  +EA  + +QM      P+  T+  ++++ C +  ++    L +++    +  D +T
Sbjct: 348 NGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYT 407

Query: 570 SIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
              L   + K       +    EM + G  PDE+
Sbjct: 408 FNILINALCKVGDPHLGIRLFEEMKSSGCAPDEV 441


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 124/479 (25%), Positives = 228/479 (47%), Gaps = 44/479 (9%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFL 186
           R + Y  V+  + +M  FG + + +   I+++ L  +  V LG  VL    K    P+ +
Sbjct: 116 RMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSII 175

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           +FN  +  LC    +    + +  ++ +G+ P V    +++N  CK+G+ + A   +  M
Sbjct: 176 TFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKM 235

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
           + L     V +++++ID   + R ++ A  L+  M   G SP VVTY SLI G   +  +
Sbjct: 236 VELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQW 295

Query: 307 SIA-FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
             A   F +MLE     PD+V  ++L+D L K G   +AL V+  ++++ + PD  T+ S
Sbjct: 296 KQASILFKEMLE-WNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSS 354

Query: 366 LLSTVCLSG----------------------RFSLLPKLVC--GLEVEA----------- 390
           L+  VC S                        FS+   + C  G+  EA           
Sbjct: 355 LIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERG 414

Query: 391 ---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
              ++V YN+L+  +C     ++A K+++ M++KG  PD  S+  L++G C + +IDEA 
Sbjct: 415 LRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAK 474

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            ++  +       N+  HT ++  L +AGR + A +LF++      P D+++Y+  + G 
Sbjct: 475 QLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGF 534

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
            + G  +EA  L+  +K   + PN    +++L   CK   ++  K L   +    ++ D
Sbjct: 535 CKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPD 593



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 85/352 (24%), Positives = 164/352 (46%), Gaps = 7/352 (1%)

Query: 109 ELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIG 168
           ++  + C  +  ++ + +    +  +    ++ F  M   G +P     N ++  +   G
Sbjct: 234 KMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSG 293

Query: 169 RVDLGIKVLKE----TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFE 224
           +      + KE       P+ ++F+I +  LCK   V     V G M++    P++  + 
Sbjct: 294 QWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYS 353

Query: 225 ILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN 284
            L++  CK     E+  LL  M++      V  +++ +D F +   +  A  +   M++ 
Sbjct: 354 SLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIER 413

Query: 285 GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
           G  PNVVTY SL+ G+        A    D++ ++G APD++ +N+LI    K    D+A
Sbjct: 414 GLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEA 473

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSY 401
             ++D +    L P+S T  +L+S +C +GR     +L   +       DL+ Y+ LLS 
Sbjct: 474 KQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSG 533

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
           FCK G  ++A+ L+  +      P++     LL G+C A K+++A  ++  +
Sbjct: 534 FCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSL 585



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 94/407 (23%), Positives = 183/407 (44%), Gaps = 45/407 (11%)

Query: 136 GMVLEAFDEMGRF---GFTPNTFARNIVMDVLFKIGRVDLGIKVLKE-TQL---PNFLSF 188
           G ++EA +++      G+ P  +   ++++ L KIG+    I  +K+  +L   P  +S+
Sbjct: 188 GRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSY 247

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           +I + +LCK   V+   D+   M   G  P V  +  L+   C  G+  +A  L   M+ 
Sbjct: 248 SIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLE 307

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
                 V  +++L+D   +   +  A  ++ KM+Q    P++VTY+SLI G  ++ ++  
Sbjct: 308 WNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKE 367

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           + + L+ + S    PD+V  ++ +D   K G   +A  + + ++E  L P+  T+ SL+ 
Sbjct: 368 SSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMD 427

Query: 369 TVCLSGR----------------------FSLLPKLVCGLE----------------VEA 390
             CL  +                      +++L K  C  E                +  
Sbjct: 428 GYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTP 487

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           + + +  L+S  C+AG P  A +L+  M   G  PD  ++  LL G C    +DEA+ ++
Sbjct: 488 NSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALF 547

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
           + +  +    N  +   ++  + +AG+   A +LF    +E+   DV
Sbjct: 548 EALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/421 (21%), Positives = 180/421 (42%), Gaps = 6/421 (1%)

Query: 189 NIALCNLCKLNDVSNVKDVIG---MMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGL 245
           N A+ + CK    SN  D +     MV    +P +  F  LL    +M        +   
Sbjct: 70  NFAVRDKCKGGSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRK 129

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           M   G S SV   T+LI+    L  + +   +  K+ + G  P+++T+ +LI G      
Sbjct: 130 MEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGR 189

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
              A   LD + S G+ P +  H ++++ L K+G    A+     ++EL   P+  ++  
Sbjct: 190 IVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSI 249

Query: 366 LLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
           ++ ++C +   +    L   +  + +   +V YN+L+   C +G   QA  L+  ML+  
Sbjct: 250 IIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWN 309

Query: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI 482
             PD  +F  L+  LC    + EA++V+  ++      +   +++++  + ++    ++ 
Sbjct: 310 MKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESS 369

Query: 483 QLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
            L    +      DVV++++ +    + G   EA  + + M    + PN  TY  ++  +
Sbjct: 370 TLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGY 429

Query: 543 CKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
           C    +   +++   +++     D  +   L K   K      A     EM + GL P+ 
Sbjct: 430 CLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNS 489

Query: 603 M 603
           +
Sbjct: 490 I 490



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 63/284 (22%), Positives = 115/284 (40%), Gaps = 6/284 (2%)

Query: 324 DLVFHNVLIDCLSKMGSY---DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
           D  F N  +    K GS+   DDAL  ++ ++ +   P    F  LL+ +     +  + 
Sbjct: 65  DASFDNFAVRDKCKGGSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVV 124

Query: 381 KLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
            +   +E   V   +     L++  C          +   +   GF P   +F  L+ GL
Sbjct: 125 SIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGL 184

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
           C   +I EA+     I+        + HT IV+ L + G+   AI   ++ +      +V
Sbjct: 185 CIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEV 244

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
           VSY++ I  L +     EA  L+  M+ I + P   TY  ++   C     K    L ++
Sbjct: 245 VSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKE 304

Query: 558 VIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           +++  ++ D  T   L   + K      A++   +M  + + PD
Sbjct: 305 MLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPD 348



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 87/209 (41%), Gaps = 4/209 (1%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV---- 176
           TF +++ ++ +  M        + M   G  PN    N +MD      ++D   KV    
Sbjct: 386 TFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIM 445

Query: 177 LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
           + +   P+ LS+NI +   CK   +   K +   M  KG  PN      L++  C+ GR 
Sbjct: 446 VNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRP 505

Query: 237 AEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSL 296
             A +L   M + G    +  ++ L+ GF +   LD A  L+E + ++   PN V    L
Sbjct: 506 YAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKIL 565

Query: 297 IKGFMEAKMFSIAFSFLDMLESEGHAPDL 325
           + G  +A     A      L  E   PD+
Sbjct: 566 LGGMCKAGKLEDAKELFSSLSIEELQPDV 594


>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Brachypodium distachyon]
          Length = 642

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 128/508 (25%), Positives = 234/508 (46%), Gaps = 20/508 (3%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFL 186
           R  +   V+  +D M + G  PN +  N+++  L +  RV    ++L E       P+ +
Sbjct: 139 RENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEV 198

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           S    +  LCKL+ +   + ++  M   G   N      +++  C   R+ E + ++  M
Sbjct: 199 SHTTIISALCKLDRLDEARGILAEMTPVGASYNA-----VVHALCGQFRMREVFLVVDEM 253

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
           +  G      A+T ++  F + R L MA  +  +MV  GC PNV T+T L+KGF +    
Sbjct: 254 VHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKV 313

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
             A    + + +EG AP  + +NVLI  L  +G    AL V+  + +   +PD  T+ +L
Sbjct: 314 HDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTL 373

Query: 367 LSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           +     +G   +   +   +     + ++VVY  ++   CK    +QA  L + M  +  
Sbjct: 374 IDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENC 433

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
            P+  +F  L+R LC   +   A+NV+ G+       N   +  ++  L   G C  A++
Sbjct: 434 PPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALR 493

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           +    +   + L +VSY   I GL +    +EA IL  +M    + P+A+T+  ++ ++C
Sbjct: 494 MLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYC 553

Query: 544 KERNIKMVKRLL--QDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           KE N++    +L   D ++    +  +TS  L   +   H    A+  L++M   G+ P+
Sbjct: 554 KEGNVRAAAWMLGRMDAVNCPRNIVAYTS--LMSGLCSQHKLDDAMVYLLKMLYEGICPN 611

Query: 602 E-MWRKL--GLLSD-ETMTPVSLFDGFV 625
           E  W  L  G+ +   T+ P+ L D  +
Sbjct: 612 EATWNVLVRGIFTHLGTIGPMHLIDHII 639



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 115/495 (23%), Positives = 210/495 (42%), Gaps = 40/495 (8%)

Query: 83  VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF 142
           V+ ++H++  + R       V  +   + + G      T+ L ++   + +  G      
Sbjct: 127 VRVYNHLLDALLR-ENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAARRML 185

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVS 202
           DEM R G  P+  +   ++  L K+ R+D    +L E   P   S+N  +  LC    + 
Sbjct: 186 DEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMT-PVGASYNAVVHALCGQFRMR 244

Query: 203 NVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLI 262
            V  V+  MV +G  P+   +  ++  FCK   +  A  +L  M+T G   +V  +TVL+
Sbjct: 245 EVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLV 304

Query: 263 DGFRRLRRLDMAGYLWEKMVQNG-----------------------------------CS 287
            GF    ++  A  +W  MV  G                                   C 
Sbjct: 305 KGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCL 364

Query: 288 PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
           P+V TY++LI GF +A    +A S  + + + G  P++V +  ++D L K   +D A ++
Sbjct: 365 PDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENL 424

Query: 348 YDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCK 404
            D +      P++ TF +L+ ++C  GR      +  G+       +   YN LL    +
Sbjct: 425 IDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFR 484

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV 464
            G    A+++   ML+ GF     S+   + GLC  R I EA+ +   +++     +A  
Sbjct: 485 EGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFT 544

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
             AI+    + G    A  +  R      P ++V+YT  + GL    + ++A +   +M 
Sbjct: 545 FNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKML 604

Query: 525 HIAVPPNAYTYRVML 539
           +  + PN  T+ V++
Sbjct: 605 YEGICPNEATWNVLV 619



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 92/422 (21%), Positives = 160/422 (37%), Gaps = 76/422 (18%)

Query: 226 LLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV-----LIDGFRRLRRLDMAGYLWEK 280
           L+   C   R   A + L         L   A TV     L+D   R   +     +++ 
Sbjct: 93  LVAAICAFARAGAADRALKTFYRARHDLGCAAPTVRVYNHLLDALLRENLVAAVVPVYDN 152

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           M + G  PNV TY  LIK   +      A   LD +  +G  PD V H  +I  L K+  
Sbjct: 153 MRKAGVEPNVYTYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDR 212

Query: 341 YDDALD------------------------------VYDGLLELKLVPDSYTFCSLLSTV 370
            D+A                                V D ++   L PD+  + S++   
Sbjct: 213 LDEARGILAEMTPVGASYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAF 272

Query: 371 CLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           C +    +   ++  +  E    ++  +  L+  F   G  + A+ ++N M+ +G+ P  
Sbjct: 273 CKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPST 332

Query: 428 YSFVGLLRGLC-----------------------------------GARKIDEAINVYQG 452
            S+  L+RGLC                                    A  +D A++++  
Sbjct: 333 ISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWND 392

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           +       N  V+T +VD L +     +A  L  +  +E  P + +++   IR L + GR
Sbjct: 393 MTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGR 452

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL---DYHT 569
              A  ++  M+    PPN  TY  +L    +E N +   R+L ++++   EL    Y+T
Sbjct: 453 AGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNT 512

Query: 570 SI 571
           +I
Sbjct: 513 TI 514



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 73/335 (21%), Positives = 136/335 (40%), Gaps = 10/335 (2%)

Query: 235 RIAEAYQLLGLMITL------GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN-GCS 287
           R+A A  L G+  TL      G +    A    I  F R    D A   + +   + GC+
Sbjct: 64  RLAAAGDLDGVQYTLQEMRLRGVACPEGALVAAICAFARAGAADRALKTFYRARHDLGCA 123

Query: 288 -PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALD 346
            P V  Y  L+   +   + +      D +   G  P++  +N+LI  L +      A  
Sbjct: 124 APTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAARR 183

Query: 347 VYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAG 406
           + D +      PD  +  +++S +C   R      ++   E+      YNA++   C   
Sbjct: 184 MLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILA--EMTPVGASYNAVVHALCGQF 241

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
              +   + + M+ +G  PD  ++  ++   C AR++  A  +   +V      N    T
Sbjct: 242 RMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFT 301

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
            +V    + G+ H A+ ++   + E +    +SY V IRGL   G  + A  ++S M   
Sbjct: 302 VLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKS 361

Query: 527 AVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
              P+  TY  ++  F K  ++ +   +  D+ +A
Sbjct: 362 DCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNA 396



 Score = 42.0 bits (97), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 36/169 (21%), Positives = 64/169 (37%), Gaps = 8/169 (4%)

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           +R L  A  +D      Q + +   A       A +     AG   +A++ F RA   ++
Sbjct: 62  VRRLAAAGDLDGVQYTLQEMRLRGVACPEGALVAAICAFARAGAADRALKTFYRA---RH 118

Query: 494 PLDVVSYTVAI-----RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
            L   + TV +       LL          +Y  M+   V PN YTY +++ + C+   +
Sbjct: 119 DLGCAAPTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRV 178

Query: 549 KMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLG 597
              +R+L ++       D  +   +   + K      A   L EM  +G
Sbjct: 179 GAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVG 227


>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 665

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/484 (25%), Positives = 227/484 (46%), Gaps = 16/484 (3%)

Query: 85  SFDHMISVVT--RLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF 142
           S D  I+V+   R  G  E    +   +   GC    + +   L        + M+   +
Sbjct: 113 SEDLFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIY 172

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKL 198
             M R G  PN +  NI++  L K  RVD   K+L E       P+ +S+   + ++ KL
Sbjct: 173 SNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKL 232

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
             V   ++   + +R  F PNV ++  L+N FC+  ++ E + LLG M+  G   +V  +
Sbjct: 233 GKVEEARE---LSIR--FQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITY 287

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG-FMEAKMFSIAFSFLDMLE 317
           + +I     +  +++A  +W KM   GCSPNV T+TSL+KG FM  ++   A +  + + 
Sbjct: 288 STVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLE-ALNIWNRMA 346

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
            EG  P++V +N LI  L   G   +A+ V   +      P+  T+ +L+     +G   
Sbjct: 347 EEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLV 406

Query: 378 LLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
              ++   +       ++VVY ++++  C++   +QA  L   M      P+  +F   +
Sbjct: 407 GASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFI 466

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
           +GLC + +++ AIN++  +     + N   +  ++D L++  R  +A++L      +   
Sbjct: 467 KGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGME 526

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
           L++V+Y     G    G+ EEA  L  +M    V P+A TY  +  ++C +  +K   +L
Sbjct: 527 LNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQL 586

Query: 555 LQDV 558
           L  +
Sbjct: 587 LDKL 590



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 117/439 (26%), Positives = 200/439 (45%), Gaps = 24/439 (5%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELA-RVGCVIKAQTFLL--FLRIYWRGEMYGMV 138
           DV S+  +IS +++L G+ E  R    EL+ R    +     L+  F R Y   E++ ++
Sbjct: 218 DVVSYTTVISSMSKL-GKVEEAR----ELSIRFQPNVSVYNALINGFCREYKVKEVFLLL 272

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCN 194
                +M   G  PN    + V+  L  IG V+L + V  +  +    PN  +F   +  
Sbjct: 273 ----GQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKG 328

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
                 V    ++   M  +GF PNV  +  L++  C  G++ EA  +   M   G S +
Sbjct: 329 YFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPN 388

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           V+ +  LIDGF +   L  A  +W KM+ NGC PNVV YTS++     + MFS A+S ++
Sbjct: 389 VSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIE 448

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            + ++   P+ V  N  I  L   G  + A++++  + +    P+  T+  +L  +    
Sbjct: 449 KMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKEN 508

Query: 375 RFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
           R     +LV  +E   +E +LV YN +   FC  G   +A+KL   ML  G  PD  ++ 
Sbjct: 509 RIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYN 568

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNN---PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
            L    C   K+  AI +   +       P V A  +T+++  +       +A+    + 
Sbjct: 569 TLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAA--YTSLLWGICNQIGVEEAVLYLDKM 626

Query: 489 IVEKYPLDVVSYTVAIRGL 507
           + E   L+  ++   +RGL
Sbjct: 627 LNEGICLNAATWNALVRGL 645



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 121/511 (23%), Positives = 215/511 (42%), Gaps = 44/511 (8%)

Query: 64  LIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFL 123
           ++A ++F   A  + + H   ++  MI  + R     + V+ ++ ++   G       F+
Sbjct: 60  VLASNYFRSIANSKAFQHTQLTYQIMIEKLGR-ECDVDGVQYLLQQMKLEGISCSEDLFI 118

Query: 124 LFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP 183
             +  Y R  +    L+ F  +  FG  P     N ++D +    R  +           
Sbjct: 119 NVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQM----------- 167

Query: 184 NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
                               ++ +   M R G  PNV  + ILL   CK  R+  A +LL
Sbjct: 168 --------------------IEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLL 207

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
             M   G    V ++T +I    +L +++ A  L  +       PNV  Y +LI GF   
Sbjct: 208 VEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRF-----QPNVSVYNALINGFCRE 262

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
                 F  L  +  +G  P+++ ++ +I  LS +G+ + AL V+  +      P+ YTF
Sbjct: 263 YKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTF 322

Query: 364 CSLLSTVCLSGRFSLLPKL-----VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
            SL+    + GR  +L  L     +     E ++V YN L+   C  G   +AV + + M
Sbjct: 323 TSLMKGYFMRGR--VLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKM 380

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
              G +P+  ++  L+ G   A  +  A  ++  ++ N    N  V+T++V+ L  +   
Sbjct: 381 ERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMF 440

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            +A  L  +   +  P + V++   I+GL   GR E A  L+ QM+     PN  TY  +
Sbjct: 441 SQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEV 500

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
           L    KE  IK    L+ ++ +  +EL+  T
Sbjct: 501 LDGLLKENRIKEALELVTEMEEKGMELNLVT 531


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 206/422 (48%), Gaps = 18/422 (4%)

Query: 109 ELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF---DEMGRFGFTPNTFARNIVMDVLF 165
           E+A  GC   A T+   +     G+  G   EAF   ++M   G  P      +++  L 
Sbjct: 126 EMAGRGCAPNAVTYNTLVNALL-GQ--GRSKEAFSLLEQMAANGCPPELITFGLIIKGLC 182

Query: 166 KIGRVDLGIKVLKETQL------PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN 219
           K G ++   +V+ E  +      P+ ++FN  L  LCK   + +  +V    + +G  PN
Sbjct: 183 KEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPN 242

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
           V  +  L++   KM ++ EA QLL  M+ LG   +   ++ ++DG  ++ R++ A  +  
Sbjct: 243 VVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLR 302

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL-DMLESEGHAPDLVFHNVLIDCLSKM 338
           +M   GC P+ VTY +LI GF + +    A   L +MLE+ G  P +V +  L   L + 
Sbjct: 303 QMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEA-GFHPSVVTYTTLCHGLCRS 361

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLVCGLEVEADLVV 394
           G +D+A+++ D +      P++ T+ S++  +C +GR +       K+     V   ++ 
Sbjct: 362 GRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIA 421

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           Y+AL+   CKAG  ++A +    M+  G  PD  +F  L+ GLC A +ID  + +++G+ 
Sbjct: 422 YSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMA 481

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
                 +   +  +VDRL  A R  +A  LF++   +    D  +    I GLLE  R E
Sbjct: 482 ERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDE 541

Query: 515 EA 516
           +A
Sbjct: 542 DA 543



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 111/424 (26%), Positives = 198/424 (46%), Gaps = 13/424 (3%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
            +EM   G  PN    N +++ L   GR      +L++       P  ++F + +  LCK
Sbjct: 124 LEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCK 183

Query: 198 LNDVSNVKDVIG--MMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
             ++     V+    M+  G  P+V  F  +L+  CK  RI +A+ +    +  G   +V
Sbjct: 184 EGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNV 243

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
             ++ LIDG  ++ ++D A  L  KMV+ GC  N VTY++++ G ++      A   L  
Sbjct: 244 VTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQ 303

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
           +   G  PD V +N LID   K     +A+ +   +LE    P   T+ +L   +C SGR
Sbjct: 304 MRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGR 363

Query: 376 FSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTML-DKGFTPDNYSFV 431
           F    +++  +       + + Y++++   CKAG   +A+  +  M  D+   P   ++ 
Sbjct: 364 FDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYS 423

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            L+ GLC A KIDEA    + ++      +    + +++ L +AGR    ++LFR     
Sbjct: 424 ALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAER 483

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM---LLSFCKERNI 548
               D+V+Y   +  L    R +EA+ L+ QM+   + P+  T R M   LL   ++ + 
Sbjct: 484 GCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDA 543

Query: 549 KMVK 552
           K ++
Sbjct: 544 KRIQ 547



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 119/476 (25%), Positives = 220/476 (46%), Gaps = 11/476 (2%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-----PNFLSFNIALCNLC 196
           F+E    G  P     N ++D L K GR++  + +  +  +     P  ++++  +  LC
Sbjct: 53  FEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLC 112

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
           + ++V     ++  M  +G  PN   +  L+N     GR  EA+ LL  M   G    + 
Sbjct: 113 RDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELI 172

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEK--MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
            + ++I G  +   ++ A  + ++  M+++G SP+V+T+ S++ G  + +    A +   
Sbjct: 173 TFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFK 232

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
                G  P++V ++ LID LSKM   D+AL +   ++EL    ++ T+ +++  +   G
Sbjct: 233 RALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVG 292

Query: 375 RFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
           R     ++ + +       D V YN L+  F K     +AV L   ML+ GF P   ++ 
Sbjct: 293 RMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYT 352

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR-AIV 490
            L  GLC + + DEA+ +   +     A NA  +++IVD L +AGR  +A+  F + A  
Sbjct: 353 TLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARD 412

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
           E     V++Y+  I GL + G+ +EAY    +M      P+  T+ +++   C    I  
Sbjct: 413 EVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDT 472

Query: 551 VKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRK 606
              L + + +     D  T   L   + +      A +   +M + GL PD   R+
Sbjct: 473 GLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRR 528



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 101/409 (24%), Positives = 179/409 (43%), Gaps = 31/409 (7%)

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
            LCK   V     +   MV K  YP+V  +  L++   K  R+ EAY L       G   
Sbjct: 4   GLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHP 63

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKM-VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
           +V  +  +IDG  +  R++ A  L++ M +  G  P VVTY++LI G             
Sbjct: 64  TVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKL 123

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
           L+ +   G AP+ V +N L++ L   G   +A  + + +      P+  TF  ++  +C 
Sbjct: 124 LEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCK 183

Query: 373 SGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
            G            E+EA   V + +                   M++ G +PD  +F  
Sbjct: 184 EG------------EIEAAFRVVDEMF------------------MIESGLSPDVITFNS 213

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           +L GLC  ++I +A NV++  +      N   ++ ++D L +  +  +A+QL  + +   
Sbjct: 214 VLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELG 273

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVK 552
              + V+Y+  + GLL+ GR E+A ++  QM+     P+A TY  ++  F K + ++   
Sbjct: 274 CRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAV 333

Query: 553 RLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            LL+++++A       T   L   + +      AV  L  M   G  P+
Sbjct: 334 GLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPN 382



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 115/257 (44%), Gaps = 5/257 (1%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR E    ++ ++   GC+  A T+   +  +++ +     +    EM   GF P+    
Sbjct: 292 GRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTY 351

Query: 158 NIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
             +   L + GR D  +++L         PN ++++  +  LCK   V+        M R
Sbjct: 352 TTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMAR 411

Query: 214 KGFY-PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
                P+V  +  L++  CK G+I EAY+ L  MI  G    V  +++LI+G     R+D
Sbjct: 412 DEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRID 471

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
               L+  M + GC P++VTY +L+     A     AF     + S+G +PD      +I
Sbjct: 472 TGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMI 531

Query: 333 DCLSKMGSYDDALDVYD 349
             L ++   +DA  + D
Sbjct: 532 HGLLEVNRDEDAKRIQD 548


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 107/425 (25%), Positives = 212/425 (49%), Gaps = 7/425 (1%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDV 207
           P+    + ++  + K+ + DL I + ++ Q      N  +++I +   C+ + +S    V
Sbjct: 79  PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
           +  M++ G+ P++     LLN FC   RI++A  L+G M+ +G       +  LI G  R
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
             R   A  L ++MV  GC P++VTY  ++ G  +     +A S L  +E     P +V 
Sbjct: 199 HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVI 258

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL- 386
           +N +ID L    + +DAL+++  +    + P+  T+ SL+  +C  GR+S   +L+  + 
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 318

Query: 387 --EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
             ++  ++V ++AL+  F K G   +A KLY+ M+ +   PD +++  L+ G C   ++D
Sbjct: 319 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 378

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
           EA ++++ ++  +   N   +  ++    +A R  + ++LFR         + V+YT  I
Sbjct: 379 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLI 438

Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
            G  +    + A I++ QM    V P+  TY ++L   C    ++    + + +  +++E
Sbjct: 439 HGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKME 498

Query: 565 LDYHT 569
            D +T
Sbjct: 499 PDIYT 503



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 119/488 (24%), Positives = 229/488 (46%), Gaps = 11/488 (2%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
           A++ F    K R  F  +  F  ++S + ++  +F+ V  +  ++  +G      T+ + 
Sbjct: 65  AVNLFGDMVKSRP-FPSIVEFSKLLSAIAKMN-KFDLVISLGEQMQNLGISHNLYTYSIL 122

Query: 126 LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET----Q 181
           +  + R     + L    +M + G+ P+    N +++      R+   + ++ +      
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
            P+  +FN  +  L + N  S    ++  MV KG  P++  + I++N  CK G I  A  
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           LL  M        V  +  +ID     + ++ A  L+ +M   G  PNVVTY SLI+   
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302

Query: 302 EAKMFSIAFSFL-DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
               +S A   L DM+E + + P++V  + LID   K G   +A  +YD +++  + PD 
Sbjct: 303 NYGRWSDASRLLSDMIERKIN-PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361

Query: 361 YTFCSLLSTVCLSGRFSLLP---KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
           +T+ SL++  C+  R        +L+   +   ++V YN L+  FCKA   ++ ++L+  
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           M  +G   +  ++  L+ G   AR+ D A  V++ +V +    +   ++ ++D L   G+
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK 481

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
              A+ +F      K   D+ +Y + I G+ + G+ E+ + L+  +    V PN  TY  
Sbjct: 482 VETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 541

Query: 538 MLLSFCKE 545
           M+  FC++
Sbjct: 542 MMSGFCRK 549



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 153/306 (50%), Gaps = 7/306 (2%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK---ETQL-PNFLSFNIALC 193
            L  F EM   G  PN    N ++  L   GR     ++L    E ++ PN ++F+  + 
Sbjct: 275 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 334

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
              K   +   + +   M+++   P++  +  L+N FC   R+ EA  +  LMI+     
Sbjct: 335 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 394

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
           +V  +  LI GF + +R+D    L+ +M Q G   N VTYT+LI GF +A+    A    
Sbjct: 395 NVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVF 454

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
             + S+G  PD++ +++L+D L   G  + AL V++ L   K+ PD YT+  ++  +C +
Sbjct: 455 KQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKA 514

Query: 374 GRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           G+      L C L    V+ ++V Y  ++S FC+ G   +A  L+  M ++G  PD+ ++
Sbjct: 515 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTY 574

Query: 431 VGLLRG 436
             L+R 
Sbjct: 575 NTLIRA 580



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 92/408 (22%), Positives = 173/408 (42%), Gaps = 40/408 (9%)

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
           ++ +A  L G M+      S+  ++ L+    ++ + D+   L E+M   G S N+ TY+
Sbjct: 61  KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
            LI  F      S+A + L  +   G+ PD+V  N L++         DA+ +   ++E+
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180

Query: 355 KLVPDSYTFCSLL-----------------------------------STVCLSGR---- 375
              PDS+TF +L+                                   + +C  G     
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240

Query: 376 FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
            SLL K+  G ++E  +V+YN ++   C     N A+ L+  M +KG  P+  ++  L+R
Sbjct: 241 LSLLKKMEQG-KIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299

Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
            LC   +  +A  +   ++      N    +A++D  ++ G+  +A +L+   I      
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 359

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
           D+ +Y+  I G     R +EA  ++  M      PN  TY  ++  FCK + +     L 
Sbjct: 360 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELF 419

Query: 556 QDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           +++    +  +  T   L    F+     +A     +M + G++PD M
Sbjct: 420 REMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIM 467


>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 124/461 (26%), Positives = 225/461 (48%), Gaps = 15/461 (3%)

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP------------NFL 186
           LE  DE+   GF+ N  +  I+++ L + GRV+  + +L+  +              N +
Sbjct: 127 LEFHDEIVNNGFSLNEVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVV 186

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
            ++I +  LC+   V    +    M+  G  PN   +  L+   C +G+  E + L+  M
Sbjct: 187 MYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEM 246

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
           I  G  +SV  +TVLIDG  +   L  A  ++++MV  G  PN+VT T+L+ G+      
Sbjct: 247 IRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNV 306

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
            +A    D +   G   D+  +NV I    K+G   DA+ V+D +    +VP+  T+ SL
Sbjct: 307 DMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSL 366

Query: 367 LSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           +  +C +G  S   ++V  +    +  D+V    LL   CK+   +QA+ L+N +++ G 
Sbjct: 367 IDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGL 426

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
           TPD +S+  L+ G C +R++ EA+N+ + + + N   +   ++ ++D L  +GR   A +
Sbjct: 427 TPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWR 486

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           L     V+    D ++Y++ +  L +    +EA  L++QM    + P+   Y +M+  +C
Sbjct: 487 LLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYC 546

Query: 544 KERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSS 584
           K   I     L +++    +  D  T   L   +FK  S+S
Sbjct: 547 KSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNS 587



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/417 (24%), Positives = 194/417 (46%), Gaps = 10/417 (2%)

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF----LSFNIALCN 194
            E ++EM   G  PN F    ++  L  +G+   G  ++ E            F + +  
Sbjct: 205 FEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDG 264

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           LCK   +   +++   MV +G+ PN+     L+  +C  G +  A +L   +   G    
Sbjct: 265 LCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRD 324

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           V  + V I G+ ++ R+  A  ++++M + G  PN+VTY SLI    +A   S A+  + 
Sbjct: 325 VWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVK 384

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            +   G  PD+V   +L+D L K    D A+ +++ L+E  L PD +++  L+   C S 
Sbjct: 385 TMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSR 444

Query: 375 RFSLLPKLVCGLEVE---ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
           R      L+  + ++     +V Y+ L+   C++G  + A +L N M  KG  PD  ++ 
Sbjct: 445 RMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYS 504

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            LL  L   + +DEA+ ++  ++      +   +T ++D   ++ R  +AI LFR   ++
Sbjct: 505 ILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMK 564

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
               D+V+YT+    + + G     +   + ++ I  PP    Y   L + CK  ++
Sbjct: 565 NLVPDIVTYTILFNAVFKSGSNSYEWKFVNVIRDINPPPRVLKY---LAALCKSEHL 618



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 121/489 (24%), Positives = 205/489 (41%), Gaps = 52/489 (10%)

Query: 164 LFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN 219
            F +G V        K+LK     + ++ N  L  LC    V    +    +V  GF  N
Sbjct: 82  FFHLGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLN 141

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL--------SVNAWTVLIDGFRRLRRL 271
              + IL+N  C+ GR+ EA  LL ++               +V  ++++ID   R   +
Sbjct: 142 EVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFV 201

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           D     + +M+ NG  PN  TY SLI+G      F   F  +D +   G    +    VL
Sbjct: 202 DEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVL 261

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL--------- 382
           ID L K G   +A +++D ++     P+  T  +L+   CL G   +  +L         
Sbjct: 262 IDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGF 321

Query: 383 -----------------------------VCGLEVEADLVVYNALLSYFCKAGFPNQAVK 413
                                        +C   V  ++V YN+L+   CKAG  + A +
Sbjct: 322 KRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWE 381

Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
           +  TM   G TPD  +   LL GLC ++++D+AI ++  +V +    +   +T ++    
Sbjct: 382 IVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCC 441

Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP-PNA 532
            + R  +A+ L R   ++     +V+Y+  I GL   GR   A+ L ++M H+  P P+ 
Sbjct: 442 TSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEM-HVKGPLPDT 500

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVE 592
            TY ++L +  K++++     L   +I   +E D      +     K      A+N   E
Sbjct: 501 ITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFRE 560

Query: 593 MCNLGLIPD 601
           M    L+PD
Sbjct: 561 MHMKNLVPD 569



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 85/315 (26%), Positives = 151/315 (47%), Gaps = 10/315 (3%)

Query: 137 MVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIAL 192
           M  E FD +G +GF  + +  N+ +    K+GRV   ++V     +E  +PN +++N  +
Sbjct: 308 MARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLI 367

Query: 193 CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
             LCK  +VS   +++  M R G  P++    ILL+  CK  R+ +A  L   ++  G +
Sbjct: 368 DCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLT 427

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
             V ++T+LI G    RR+  A  L   M      P++VTY+ LI G   +   S A+  
Sbjct: 428 PDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRL 487

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
           L+ +  +G  PD + +++L+D L K    D+A+ +++ +++  L PD   +  ++   C 
Sbjct: 488 LNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCK 547

Query: 373 SGRFSLLPKLVCGLEVE---ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
           S R      L   + ++    D+V Y  L +   K+G  +   K  N + D    P    
Sbjct: 548 SERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVNVIRDINPPPRVLK 607

Query: 430 FVGLLRGLCGARKID 444
           +   L  LC +  +D
Sbjct: 608 Y---LAALCKSEHLD 619


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 213/451 (47%), Gaps = 10/451 (2%)

Query: 115 CVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI 174
           C     TF + L+ + +        + F++M   G +P+    NI++D   K GRVD   
Sbjct: 4   CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEAN 63

Query: 175 KVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCF 230
           ++ +E       P+  ++N  L   CK   +    ++   M  KGF P+V  +  +++  
Sbjct: 64  RLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGL 123

Query: 231 CKMGRIAEAYQLL-GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
           CK G++ EA ++L   MI  G S +  A+  LI+G  +   ++ A  L E+M   G  P+
Sbjct: 124 CKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPD 183

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
            +TY +++ G       S A  F D + S G++PD+V +N L+D L K G  D+A+ ++ 
Sbjct: 184 NITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFK 243

Query: 350 GLLELKLVPDSYTFCSLLSTVCLSGRF----SLLPKLVCGLEVEADLVVYNALLSYFCKA 405
            ++    +PD+ T+ S+L  +           +  K+V       +   Y+ +LS  C+A
Sbjct: 244 DVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVAS-GCAPNGATYSIVLSGHCRA 302

Query: 406 GFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVH 465
              + A K+   M   G  PD  ++  LL GLC    +D+A  ++  +V N  A +   +
Sbjct: 303 KKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSY 362

Query: 466 TAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKH 525
           + +++ L +  + H A  LF R I  K   DVV++ + + GL + G+ +EA  L  QM  
Sbjct: 363 SVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTC 422

Query: 526 IAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
               P+   Y  ++    K+       RL Q
Sbjct: 423 SGCAPDYVAYNTLMNGLRKQGRHIQADRLTQ 453



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 105/425 (24%), Positives = 196/425 (46%), Gaps = 8/425 (1%)

Query: 151 TPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKD 206
           +PN +   +V+    K G++  G K+ ++       P+ + +NI +    K   V     
Sbjct: 5   SPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANR 64

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
           +   MV  G  P++  +  LLN FCK  ++ EA +L   M   G    V  ++ +I G  
Sbjct: 65  LYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLC 124

Query: 267 RLRRLDMA-GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL 325
           +  ++  A   L+ KM++ GCS N V Y +LI G  + +    A+  L+ + S+G+ PD 
Sbjct: 125 KTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDN 184

Query: 326 VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL--- 382
           + +N ++  L +MG   +A   +D +      PD   +  LL  +   G+     KL   
Sbjct: 185 ITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKD 244

Query: 383 VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
           V       D V YN++L    +    ++A +++  M+  G  P+  ++  +L G C A+K
Sbjct: 245 VIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKK 304

Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTV 502
           +D+A  V + +       +   +  ++D L +     KA +LF   +      D+VSY+V
Sbjct: 305 VDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSV 364

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
            + GL +  +  +A +L+ +M    + P+  T+ +++   CK   +   K LL  +  + 
Sbjct: 365 VLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSG 424

Query: 563 IELDY 567
              DY
Sbjct: 425 CAPDY 429



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/424 (25%), Positives = 203/424 (47%), Gaps = 6/424 (1%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           PN  +F + L + CK   + +   +   M+  G  P+   + IL++ + K GR+ EA +L
Sbjct: 6   PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
              M+++G   S+  +  L++ F +  ++  A  L++ M + G  P+VVTY+++I G  +
Sbjct: 66  YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCK 125

Query: 303 AKMFSIAFSFL--DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
               + A   L   M+E  G + + V +N LI+ L K  + + A  + + +     VPD+
Sbjct: 126 TGKVTEALEMLFHKMIE-RGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDN 184

Query: 361 YTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNT 417
            T+ ++LS +C  G+ S   +    +       D+V YN LL    K G  ++A+KL+  
Sbjct: 185 ITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKD 244

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           ++ KG+ PD  ++  +L GL     +DEA  +++ +V +  A N   ++ ++     A +
Sbjct: 245 VIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKK 304

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
              A ++           DVV+Y + + GL +    ++A+ L+S M      P+  +Y V
Sbjct: 305 VDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSV 364

Query: 538 MLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLG 597
           +L   CK   +   + L   +I+ ++  D  T   L   + K      A + L +M   G
Sbjct: 365 VLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSG 424

Query: 598 LIPD 601
             PD
Sbjct: 425 CAPD 428



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 96/403 (23%), Positives = 184/403 (45%), Gaps = 9/403 (2%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR +    +  E+  VG      T+   L  + +       +E F  M   GF P+    
Sbjct: 57  GRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTY 116

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQL-----PNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
           + ++  L K G+V   +++L    +      N +++N  +  LCK  ++     ++  M 
Sbjct: 117 STIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMA 176

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
            KG+ P+   +  +L+  C+MG+++EA Q    M + G S  V A+  L+D   +  + D
Sbjct: 177 SKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTD 236

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A  L++ ++  G  P+ VTY S++ G         A      + + G AP+   +++++
Sbjct: 237 EAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVL 296

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVE 389
               +    DDA  V + + ++  VPD  T+  LL  +C +       +L   +      
Sbjct: 297 SGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCA 356

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            D+V Y+ +L+  CK    + A  L++ M+++   PD  +F  L+ GLC A K+DEA ++
Sbjct: 357 PDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDL 416

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
              +  +  A +   +  +++ L + GR H       +A+ EK
Sbjct: 417 LDQMTCSGCAPDYVAYNTLMNGLRKQGR-HIQADRLTQAMKEK 458



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 153/338 (45%), Gaps = 48/338 (14%)

Query: 136 GMVLEA----FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLS 187
           G V EA    F +M   G + NT A N +++ L K   ++   K+L+E      +P+ ++
Sbjct: 127 GKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNIT 186

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           +N  L  LC++  VS  K     M  +G+ P+V  +  LL+   K G+  EA +L   +I
Sbjct: 187 YNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVI 246

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
             G       +  ++ G  R   +D A  +++KMV +GC+PN  TY+ ++ G   AK   
Sbjct: 247 AKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVD 306

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD------------------------- 342
            A   L+ +   G  PD+V +N+L+D L K    D                         
Sbjct: 307 DAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVL 366

Query: 343 ----------DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLVCGLEV 388
                     DA  ++D ++E KLVPD  TF  L+  +C +G+      LL ++ C    
Sbjct: 367 NGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCS-GC 425

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
             D V YN L++   K G   QA +L   M +KGF  D
Sbjct: 426 APDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 463



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 135/304 (44%), Gaps = 45/304 (14%)

Query: 100 FETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA---FDEMGRFGFTPNTFA 156
            E    ++ E+A  G V    T+   L    R    G V EA   FD M   G++P+  A
Sbjct: 165 IERAYKLLEEMASKGYVPDNITYNTILSGLCR---MGKVSEAKQFFDSMPSRGYSPDVVA 221

Query: 157 RNIVMDVLFKIGRVDLGIKVLKET----QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N ++D L+K G+ D  +K+ K+      +P+ +++N  L  L + +++   +++   MV
Sbjct: 222 YNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMV 281

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
             G  PN   + I+L+  C+  ++ +A+++L  M  +G    V  + +L+DG  +   +D
Sbjct: 282 ASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVD 341

Query: 273 MAGYLWEKMVQNGCSPNVVTYTS-----------------------------------LI 297
            A  L+  MV NGC+P++V+Y+                                    L+
Sbjct: 342 KAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILM 401

Query: 298 KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
            G  +A     A   LD +   G APD V +N L++ L K G +  A  +   + E   +
Sbjct: 402 DGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFL 461

Query: 358 PDSY 361
            D +
Sbjct: 462 SDCF 465



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 98/216 (45%), Gaps = 1/216 (0%)

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
           E   +   +  +L  FCK G      KL+  MLD G +PD   +  L+ G     ++DEA
Sbjct: 3   ECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEA 62

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
             +Y+ +V      + + + ++++   +  +  +A++LF+    + +  DVV+Y+  I G
Sbjct: 63  NRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISG 122

Query: 507 LLEGGRTEEA-YILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
           L + G+  EA  +L+ +M       N   Y  ++   CK+ NI+   +LL+++       
Sbjct: 123 LCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVP 182

Query: 566 DYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           D  T   +   + +    S A      M + G  PD
Sbjct: 183 DNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPD 218



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 53/115 (46%)

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
           M   + N +    ++    + G+     +LF + +      D + Y + I G  + GR +
Sbjct: 1   MRECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVD 60

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
           EA  LY +M  + + P+ YTY  +L +FCKE  +K    L + + +   E D  T
Sbjct: 61  EANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVT 115


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 117/478 (24%), Positives = 228/478 (47%), Gaps = 13/478 (2%)

Query: 136 GMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSF 188
           G VLE+   FD++ + G  PN F  NI +  L K G +D  +++L    +E   P+ +++
Sbjct: 309 GFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTY 368

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           N  +C LC+ + V   ++ +  MV  GF PN   +  +++ +CK G + +A ++L   + 
Sbjct: 369 NTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVF 428

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
            G       +  L++GF +    D A  +++  +  G  P+++ Y +LIKG  +  +   
Sbjct: 429 KGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILP 488

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A   ++ +  +G  PD+  +N++I+ L KMG   DA  +    +    +PD +T+ +L+ 
Sbjct: 489 ALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVD 548

Query: 369 TVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
             C   +     +LV  +  +    D++ YN LL+  CK     + ++++  M +KG  P
Sbjct: 549 GYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAP 608

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           +  ++  ++  LC ++K++EA+++   +       +      ++    + G    A  LF
Sbjct: 609 NIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLF 668

Query: 486 RRAIVEKYPLD--VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
            R + ++Y +     +Y + I    E    + A  L+S+MK     P+ YTYRV++  FC
Sbjct: 669 -RGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFC 727

Query: 544 KERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           K  N+    + L + I+        T  R+   +   H    AV  +  M    ++PD
Sbjct: 728 KTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPD 785



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 124/523 (23%), Positives = 217/523 (41%), Gaps = 43/523 (8%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE- 179
           T+ + ++ + R       L     M   G   N  A   V+   ++ G  D   ++  E 
Sbjct: 227 TYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEM 286

Query: 180 ---TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
                 P+  +FN  +  LCK   V   + +   ++++G  PN+  F I +   CK G +
Sbjct: 287 LECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSL 346

Query: 237 AEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSL 296
             A +LLG +   G    V  +  +I G  R  R+  A     KMV  G  PN  TY S+
Sbjct: 347 DRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSI 406

Query: 297 IKGFMEAKMFSIA----------------FSFLDMLE-------------------SEGH 321
           I G+ +  M   A                F++  ++                     +G 
Sbjct: 407 IDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGL 466

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPK 381
            P ++ +N LI  L + G    AL + + + E    PD +T+  +++ +C  G  S    
Sbjct: 467 RPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANH 526

Query: 382 LVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
           L+     +    D+  YN L+  +C+    + A++L N M  +G TPD  ++  LL GLC
Sbjct: 527 LIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLC 586

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
              K +E + +++ +     A N   +  I++ L  + + ++A+ L      +    DVV
Sbjct: 587 KTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVV 646

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQM-KHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
           S+   I G  + G  + AY L+  M K   V     TY +++ +F ++ N+KM  RL  +
Sbjct: 647 SFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSE 706

Query: 558 VIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           +     + D +T   L     K  + +     L+E    G IP
Sbjct: 707 MKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIP 749



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 113/529 (21%), Positives = 213/529 (40%), Gaps = 43/529 (8%)

Query: 84  QSFDHMI----SVVTRLT--GRFETVRGIVGEL-ARVGCVIKAQTFLLFLRIYWRGEMYG 136
           Q F H +    S++ +L   G+F  +  ++ E+ + +   +    ++  +R Y R     
Sbjct: 113 QGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLEGVYVEAMRFYGRKGKIQ 172

Query: 137 MVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLC 196
             ++ F+ M  F   P+ ++ N +M++L + G  +   KV                    
Sbjct: 173 EAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMR----------------- 215

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
                         M  K    +V  + I +  FC+ GR   A +LL  M  LG   +  
Sbjct: 216 --------------MKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAV 261

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
           A+  ++ GF      D A  L+++M++    P+V T+  L+    +      +    D +
Sbjct: 262 AYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKV 321

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
              G  P+L   N+ I  L K GS D A+ +   +    L PD  T+ +++  +C   R 
Sbjct: 322 LKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRV 381

Query: 377 ----SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
                 L K+V G   E +   YN+++  +CK G    A ++    + KGF PD +++  
Sbjct: 382 VEAEECLHKMVNG-GFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCS 440

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           L+ G C     D+A+ V++  +      +  V+  ++  L + G    A+QL      + 
Sbjct: 441 LVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKG 500

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVK 552
              D+ +Y + I GL + G   +A  L          P+ +TY  ++  +C++  +    
Sbjct: 501 CKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAI 560

Query: 553 RLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            L+  +    +  D  T   L   + K   S   +     M   G  P+
Sbjct: 561 ELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPN 609



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/284 (24%), Positives = 132/284 (46%), Gaps = 6/284 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D+ +++ +I+ + ++ G       ++G+    GC+    T+   +  Y R       +E 
Sbjct: 504 DIWTYNLIINGLCKM-GCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIEL 562

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
            + M   G TP+    N +++ L K  + +  +++ K        PN +++N  + +LC 
Sbjct: 563 VNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCN 622

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL-GLMITLGTSLSVN 256
              V+   D++G M  KG  P+V  F  L+  FCK+G +  AY L  G+      S +  
Sbjct: 623 SKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTA 682

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
            + ++I  F     + MA  L+ +M +NGC P+  TY  LI GF +    +  + FL   
Sbjct: 683 TYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLEN 742

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
             +G  P L     +++CL       +A+ +   +++  +VPD+
Sbjct: 743 IEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDT 786


>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
 gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
          Length = 653

 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 119/470 (25%), Positives = 204/470 (43%), Gaps = 34/470 (7%)

Query: 86  FDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEM 145
           ++H+I  + R       V  + G + + G      T+ L +R   +    G   +  DEM
Sbjct: 137 YNHLIDALLR-ENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEM 195

Query: 146 GRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVK 205
              G  P+      ++  L  +GRVD   +VL     P   S+N  +  LC+   +  V 
Sbjct: 196 ATKGCPPDDVTYGTIVSALCTLGRVDEATEVLSAAP-PVAASYNAVILALCREFRMQEVF 254

Query: 206 DVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF 265
            V+G MV +G  PNV  +  ++N FCK G +  A  +L  M+  G + +V  +T L+ G 
Sbjct: 255 AVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGL 314

Query: 266 RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL 325
               R+  A  +W+ MV  G +P+ V+Y  LI+G         A S L+ +E  G  P+ 
Sbjct: 315 FNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNA 374

Query: 326 VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCG 385
             ++ LID  SK G  D A+ +++ +      P+                          
Sbjct: 375 RTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPN-------------------------- 408

Query: 386 LEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
                 +VVY  ++  FCK    NQA  L + ML +   P+  +F  L+R LC  R++  
Sbjct: 409 ------VVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGR 462

Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
           A+ V+  +  +    N   +  ++  L   G C  A+Q+          L +V+Y   + 
Sbjct: 463 ALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVS 522

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
           GL +     EA     +M    + P+A+T+  ++ ++CKE  ++M   +L
Sbjct: 523 GLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWIL 572



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 92/374 (24%), Positives = 166/374 (44%), Gaps = 8/374 (2%)

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKL 198
           D +GR G  PN      +++   K G + +   +L    +    PN  +F   +  L   
Sbjct: 259 DMVGR-GLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFND 317

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
             V +  D+   MV +G+ P+   + +L+   C +G +  A  +L  M   G   +   +
Sbjct: 318 GRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTY 377

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
           + LIDGF +   LD A  +W  M ++GC PNVV YT+++  F +  MF+ A S +D +  
Sbjct: 378 STLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLV 437

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL 378
           E   P+ V  N LI  L        AL V+  +      P+  T+  LL  +   G    
Sbjct: 438 ENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGD 497

Query: 379 LPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
             ++V  ++   +E  LV YN ++S  C+     +A+     M+ +G  PD ++F  ++ 
Sbjct: 498 ALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIH 557

Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
             C   ++  A  +   + + N   N  V+T ++  L    +   A+    + + E    
Sbjct: 558 AYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELCNQDKLEDAMVYLLKMLYEGIYP 617

Query: 496 DVVSYTVAIRGLLE 509
           + V++ V +RG+  
Sbjct: 618 NTVTWNVLVRGVFR 631



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 94/424 (22%), Positives = 174/424 (41%), Gaps = 37/424 (8%)

Query: 178 KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIA 237
           K+   PN  ++N+ +  LC+ + V   + ++  M  KG  P+   +  +++  C +GR+ 
Sbjct: 162 KDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVD 221

Query: 238 EAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLI 297
           EA ++L     +  S     +  +I    R  R+     +   MV  G  PNV+TYT+++
Sbjct: 222 EATEVLSAAPPVAAS-----YNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIV 276

Query: 298 KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
             F +A    +A + L  +   G  P++     L+  L   G   DALD++  ++     
Sbjct: 277 NAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWA 336

Query: 358 PDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
           P +                                V YN L+   C  G    A  + N 
Sbjct: 337 PST--------------------------------VSYNVLIRGLCSVGDLKGASSVLND 364

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           M   G  P+  ++  L+ G   A  +D AI+++  +  +    N  V+T +V    +   
Sbjct: 365 MEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLM 424

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
            ++A  L  + +VE  P + V++   IR L    R   A  ++ +M+    PPN  TY  
Sbjct: 425 FNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNE 484

Query: 538 MLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLG 597
           +L    +E N     +++ ++ +  IEL   T   +   + +      A+  +  M   G
Sbjct: 485 LLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRG 544

Query: 598 LIPD 601
           + PD
Sbjct: 545 IQPD 548



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/407 (19%), Positives = 156/407 (38%), Gaps = 43/407 (10%)

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           L + N V  V  V G M + G  PNV  + +L+   C+  R+  A ++L           
Sbjct: 144 LLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVGAARKML----------- 192

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
                                   ++M   GC P+ VTY +++           A   L 
Sbjct: 193 ------------------------DEMATKGCPPDDVTYGTIVSALCTLGRVDEATEVL- 227

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
                   P    +N +I  L +     +   V   ++   L P+  T+ ++++  C +G
Sbjct: 228 ----SAAPPVAASYNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAG 283

Query: 375 RFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
              +   ++  + +     ++  + AL+      G  + A+ ++  M+ +G+ P   S+ 
Sbjct: 284 ELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYN 343

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            L+RGLC    +  A +V   +  +    NA  ++ ++D   +AG    AI ++      
Sbjct: 344 VLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRS 403

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
               +VV YT  +    +     +A  L  +M     PPN  T+  ++ S C  R +   
Sbjct: 404 GCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRA 463

Query: 552 KRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGL 598
             +  ++       +  T   L   +F+  +   A+  ++EM N G+
Sbjct: 464 LGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGI 510



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/277 (21%), Positives = 120/277 (43%), Gaps = 4/277 (1%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G  +    ++ ++ + GC   A+T+   +  + +       +  +++M R G  PN    
Sbjct: 353 GDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVY 412

Query: 158 NIVMDVLFK---IGRVDLGI-KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
             ++ V  K     + +  I K+L E   PN ++FN  + +LC    V     V   M R
Sbjct: 413 TNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRR 472

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G  PN R +  LL+   + G   +A Q++  M   G  LS+  +  ++ G  ++R    
Sbjct: 473 HGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGRE 532

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A +   +M+  G  P+  T+T++I  + +     +A   L  +       +++ + +L+ 
Sbjct: 533 AMFFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMA 592

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
            L      +DA+     +L   + P++ T+  L+  V
Sbjct: 593 ELCNQDKLEDAMVYLLKMLYEGIYPNTVTWNVLVRGV 629



 Score = 45.4 bits (106), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 44/209 (21%), Positives = 77/209 (36%), Gaps = 40/209 (19%)

Query: 100 FETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNI 159
           F     ++ ++    C     TF   +R        G  L  F EM R G  PN    N 
Sbjct: 425 FNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNE 484

Query: 160 VMDVLFKIGRVDLGIKVLKETQLP----NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG 215
           ++  LF+ G     ++++ E Q      + +++N  +  LC++         +G M+ +G
Sbjct: 485 LLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRG 544

Query: 216 FYPNVRMFEILLNCFCKMGRIAEAYQLLGLM--ITLGTSLSVNA---------------- 257
             P+   F  +++ +CK G +  A  +LG M  +  G ++ V                  
Sbjct: 545 IQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELCNQDKLEDAM 604

Query: 258 -----------------WTVLIDG-FRRL 268
                            W VL+ G FR L
Sbjct: 605 VYLLKMLYEGIYPNTVTWNVLVRGVFRNL 633


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 141/586 (24%), Positives = 251/586 (42%), Gaps = 42/586 (7%)

Query: 57  LLNCPSDL-IALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGC 115
           LL  P D+  ++  F     QR Y H    +  +I  +  + G F+ +  ++ ++   GC
Sbjct: 67  LLELPLDVPTSMDLFEKAGLQRGYIHSFHVYYLLIDKLGNV-GEFKMIDKLLKQMKDEGC 125

Query: 116 VIKAQTFLLFLRIYWRGEMYGMVLEAFDEM-GRFGFTPNTFARNIVMDVLFKIGRVDLGI 174
           V K   F+L +R Y +  + G       +M G + F P   + N+V+++L       +  
Sbjct: 126 VFKESLFILIMRYYGKAGLPGQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAP 185

Query: 175 KV----LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCF 230
            V    L     P   +F + +   C +N+V +   ++  M + G  PN  ++++L++  
Sbjct: 186 NVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHAL 245

Query: 231 CKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA---------------- 274
            +  R+ EA +LL  M  +G    V  +  +I G  +  R+  A                
Sbjct: 246 SENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADA 305

Query: 275 ---GYLWEKMVQNG------------CSPNVVTYTSLIKGFMEAKMFSIAFSFL-DMLES 318
              GYL   + + G             +PN V Y +LI G++ +  F  A   L   +  
Sbjct: 306 LIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVI 365

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL 378
            G  PD    N++ID L K G    AL+  D +++    P+  T+  L+   C  G F  
Sbjct: 366 AGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEE 425

Query: 379 LPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
             K+V  +  +    + V YN L+   CK G    A+++Y  M  KG  PD Y+F  L+ 
Sbjct: 426 ASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIY 485

Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
           GLC   K++EA+ +Y+ +++     N   +  ++   +      +A +L         PL
Sbjct: 486 GLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPL 545

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
           D ++Y   I+ L + G TE+   L  QM    + P+  +  +++ SFC+   +    + L
Sbjct: 546 DNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFL 605

Query: 556 QDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           +D+I   +  D  T   L   + K      A+N    +   G+ PD
Sbjct: 606 RDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPD 651



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 117/447 (26%), Positives = 205/447 (45%), Gaps = 16/447 (3%)

Query: 109 ELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIG 168
           ++ + GCV  +  + + +            ++  +EM   G  P+    N V+  L K G
Sbjct: 225 DMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAG 284

Query: 169 RVDLGIKVLKETQLPNFLSFNIA----LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFE 224
           R+    K+     L +F +  +     +  LC++  V   +     M+ K   PN  ++ 
Sbjct: 285 RIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEAR----AMLSKIPNPNTVLYN 340

Query: 225 ILLNCFCKMGRIAEAYQLL-GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQ 283
            L+N +   GR  EA  LL   M+  G       + ++IDG  +   L  A    ++MV+
Sbjct: 341 TLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVK 400

Query: 284 NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
            G  PNV+TYT LI GF +   F  A   ++ + ++G + + V +N LI  L K G   D
Sbjct: 401 KGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQD 460

Query: 344 ALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE---ADLVVYNALLS 400
           AL +Y  +      PD YTF SL+  +C + +      L   + +E   A+ V YN L+ 
Sbjct: 461 ALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIH 520

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN--P 458
            F +     QA KL   M  +G   DN ++ GL++ LC     ++ + + + +      P
Sbjct: 521 AFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFP 580

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
           ++N+     +++     G+ + A+Q  R  I      D+V+Y   I GL + GR +EA  
Sbjct: 581 SINSC--NILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALN 638

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKE 545
           L++ ++   + P+A TY  ++  +C E
Sbjct: 639 LFNGLQAKGIHPDAVTYNTLISRYCYE 665



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 93/379 (24%), Positives = 176/379 (46%), Gaps = 12/379 (3%)

Query: 151 TPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-----PNFLSFNIALCNLCKLNDVSNVK 205
            PNT   N +++     GR +    +L +  +     P+  +FNI +  LCK   + +  
Sbjct: 333 NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSAL 392

Query: 206 DVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF 265
           + +  MV+KGF PNV  + IL++ FCK G   EA +++  M   G SL+   +  LI   
Sbjct: 393 EFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGAL 452

Query: 266 RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL 325
            +  ++  A  ++ +M   GC P++ T+ SLI G  +      A      +  EG   + 
Sbjct: 453 CKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANT 512

Query: 326 VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP-DSYTFCSLLSTVCLSGR----FSLLP 380
           V +N LI    ++     A D   G +  +  P D+ T+  L+  +C +G       L+ 
Sbjct: 513 VTYNTLIHAFLRLELIQQA-DKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIE 571

Query: 381 KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
           ++  G E+   +   N L++ FC+ G  N A++    M+ +G TPD  ++  L+ GLC  
Sbjct: 572 QMF-GEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKM 630

Query: 441 RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSY 500
            +  EA+N++ G+       +A  +  ++ R    G  + A QL  + +   +  + +++
Sbjct: 631 GRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITW 690

Query: 501 TVAIRGLLEGGRTEEAYIL 519
           ++ I   ++     E + +
Sbjct: 691 SILINYFVKNNSDSEQFTI 709



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 155/365 (42%), Gaps = 8/365 (2%)

Query: 96  LTGRFETVRGIV-GELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNT 154
           ++GRFE  + ++   +   G    A TF + +    +       LE  DEM + GF PN 
Sbjct: 348 VSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNV 407

Query: 155 FARNIVMDVLFKIGRVDLGIKVLKETQLP----NFLSFNIALCNLCKLNDVSNVKDVIGM 210
               I++D   K G  +   KV+          N + +N  +  LCK   + +   + G 
Sbjct: 408 ITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGE 467

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M  KG  P++  F  L+   CK  ++ EA  L   M+  G   +   +  LI  F RL  
Sbjct: 468 MSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLEL 527

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           +  A  L  +M   GC  + +TY  LIK   +          ++ +  E   P +   N+
Sbjct: 528 IQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNI 587

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE--- 387
           LI+   + G  +DAL     +++  L PD  T+ SL++ +C  GRF     L  GL+   
Sbjct: 588 LINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKG 647

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
           +  D V YN L+S +C  G  N A +L    +  GF P+  ++  L+          E  
Sbjct: 648 IHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKNNSDSEQF 707

Query: 448 NVYQG 452
            +  G
Sbjct: 708 TILMG 712


>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
 gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
          Length = 628

 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 121/482 (25%), Positives = 224/482 (46%), Gaps = 35/482 (7%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET 180
           T+  FL    +     +  E F +M R G+ P+ F  +IV+  L K G +D   ++L + 
Sbjct: 40  TYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQL 99

Query: 181 QLP----NFLSFNIALCNLCKLNDVSNVKDVIGMM-VRKGFYPNVRMFEILLNCFCKMGR 235
           +      N +++++ +   CK + V +  ++   M    G  P+V  F  LL   C   R
Sbjct: 100 RESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGER 159

Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
           ++EA+ L   M   G   +V +++ L+DG  +  RLD A  LWE+MV+  C P++V YTS
Sbjct: 160 MSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTS 219

Query: 296 LIKGFMEA------------------KMFSIAFS-FLDMLESEGHAPDLVFHNVLIDCLS 336
            + G  +A                  K  ++AFS  + +L  +GHA +    N +I+ L 
Sbjct: 220 FVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEA--QNQMIEHLC 277

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLVCGLE--VEA 390
           + G  D+A   ++ ++     P +  F +L+  VC S R      L  ++    E     
Sbjct: 278 RSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPP 337

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           +L  YN ++   CKA   ++A +L N M + G +PD  ++  L+ GLC   K+D A ++ 
Sbjct: 338 NLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLL 397

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
           + +       ++    +I++ L +AG+   A+             D+V+Y   + GL + 
Sbjct: 398 EEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKA 457

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD---Y 567
           GR +EA    ++M      P+ ++Y +++ + C+         + Q+++   +  D   Y
Sbjct: 458 GRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLY 517

Query: 568 HT 569
           H+
Sbjct: 518 HS 519



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 119/486 (24%), Positives = 221/486 (45%), Gaps = 36/486 (7%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG 173
           GCV    TF   L+    GE        F+ M + G  PN  + + ++D L K GR+D  
Sbjct: 139 GCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEA 198

Query: 174 IKVLKE----TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
            ++ +E    + +P+ +++   +  LCK N V+   D    MV KG   +   F  ++  
Sbjct: 199 CRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGI 258

Query: 230 FCKMGRIAEAYQLL-------GL----------MITLGTSLSVNAWTVLIDGFRRLRRLD 272
            CK G   EA   +       G+          MI+     S   +  LI    + +RL 
Sbjct: 259 LCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLP 318

Query: 273 MAGYLWEKMVQNG---CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHN 329
               L+++M       C PN+ TY  ++    +AK    A   ++ + + G +PD+V ++
Sbjct: 319 DGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYS 378

Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE 389
            L+D L K+G  D A D+ + + +  + PDS+T  S+L+ +  +G+       +  ++  
Sbjct: 379 ALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKAR 438

Query: 390 A---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
               DLV YN LL   CKAG  ++A+     M+    TPD +S+  ++  LC + +   A
Sbjct: 439 GSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGA 498

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
             ++Q +V      +  ++ +++D L   G    A++L + ++ +    D V + + + G
Sbjct: 499 HAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCKP---DFVMHKMVVDG 555

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           L + G+ E+A  +  +M     P +A+TY  ++    K   +   ++L+ D  +      
Sbjct: 556 LCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQLVDDASET----- 610

Query: 567 YHTSIR 572
            HTS+ 
Sbjct: 611 -HTSVE 615



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 109/457 (23%), Positives = 215/457 (47%), Gaps = 32/457 (7%)

Query: 158 NIVMDVLFKIGRVDLGIKVL-----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            +V +VL  +G++   +++      ++    +  ++N  L  L K N      +    M 
Sbjct: 6   TVVGEVLRHLGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQ 65

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
           R+G+ P+   + I+L   CK G + +A +LLG +   G  L+V  ++V+IDG  +  R+D
Sbjct: 66  RRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVD 125

Query: 273 MAGYLWEKM-VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
            A  +++ M    GC P+VVT+ SL+KG    +  S AF   + +   G  P+++ ++ L
Sbjct: 126 DALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTL 185

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLVCGLE 387
           +D L K G  D+A  +++ ++E   VPD   + S ++ +C + R +       K+V    
Sbjct: 186 LDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTK-G 244

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
            +AD V ++ ++   CK G   +A    N M++                LC +  +DEA 
Sbjct: 245 SKADAVAFSTVIGILCKKGHAEEA---QNQMIEH---------------LCRSGMLDEAC 286

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR--AIVEKY-PLDVVSYTVAI 504
             ++ ++  N   +A +   ++  + ++ R    + LF+R  ++ E Y P ++ +Y + +
Sbjct: 287 KTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMV 346

Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
             L +  + +EA  L ++M +  + P+  TY  ++   CK   +     LL+++    + 
Sbjct: 347 DNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVF 406

Query: 565 LDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            D  T   +   + K      A++ L  M   G  PD
Sbjct: 407 PDSFTDASILNALSKAGKVDYALSHLETMKARGSTPD 443



 Score = 47.4 bits (111), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 34/170 (20%), Positives = 76/170 (44%), Gaps = 2/170 (1%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           K R    D+ +++ ++  + +  GR +     + ++    C     ++ + +    R   
Sbjct: 436 KARGSTPDLVTYNTLLDGLCK-AGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQ 494

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-PNFLSFNIALC 193
                  F EM + G  P+T   + ++D L + G  DL +++LK +   P+F+   + + 
Sbjct: 495 AAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCKPDFVMHKMVVD 554

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
            LCK     +  +V+  M   GF  +   +  ++    K+G++ +A QL+
Sbjct: 555 GLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQLV 604


>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
 gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
          Length = 628

 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 121/482 (25%), Positives = 224/482 (46%), Gaps = 35/482 (7%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET 180
           T+  FL    +     +  E F +M R G+ P+ F  +IV+  L K G +D   ++L + 
Sbjct: 40  TYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQL 99

Query: 181 QLP----NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG-FYPNVRMFEILLNCFCKMGR 235
           +      N +++++ +   CK + V +  ++   M   G   P+V  F  LL   C   R
Sbjct: 100 RESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGER 159

Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
           ++EA+ L   M   G   +V +++ L+DG  +  RLD A  LWE+MV+  C P++V YTS
Sbjct: 160 MSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTS 219

Query: 296 LIKGFMEA------------------KMFSIAFS-FLDMLESEGHAPDLVFHNVLIDCLS 336
            + G  +A                  K  ++AFS  + +L  +GHA +    N +I+ L 
Sbjct: 220 FVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEA--QNQMIEHLC 277

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLVCGLE--VEA 390
           + G  D+A   ++ ++     P +  F +L+  VC S R      L  ++    E     
Sbjct: 278 RSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPP 337

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           +L  YN ++   CKA   ++A +L N M + G +PD  ++  L+ GLC   K+D A ++ 
Sbjct: 338 NLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLL 397

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
           + +       ++    +I++ L +AG+   A+             D+V+Y   + GL + 
Sbjct: 398 EEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKA 457

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD---Y 567
           GR +EA    ++M      P+ ++Y +++ + C+         + Q+++   +  D   Y
Sbjct: 458 GRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLY 517

Query: 568 HT 569
           H+
Sbjct: 518 HS 519



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 119/486 (24%), Positives = 221/486 (45%), Gaps = 36/486 (7%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG 173
           GCV    TF   L+    GE        F+ M + G  PN  + + ++D L K GR+D  
Sbjct: 139 GCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEA 198

Query: 174 IKVLKE----TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
            ++ +E    + +P+ +++   +  LCK N V+   D    MV KG   +   F  ++  
Sbjct: 199 CRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGI 258

Query: 230 FCKMGRIAEAYQLL-------GL----------MITLGTSLSVNAWTVLIDGFRRLRRLD 272
            CK G   EA   +       G+          MI+     S   +  LI    + +RL 
Sbjct: 259 LCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLP 318

Query: 273 MAGYLWEKMVQNG---CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHN 329
               L+++M       C PN+ TY  ++    +AK    A   ++ + + G +PD+V ++
Sbjct: 319 DGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYS 378

Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE 389
            L+D L K+G  D A D+ + + +  + PDS+T  S+L+ +  +G+       +  ++  
Sbjct: 379 ALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKAR 438

Query: 390 A---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
               DLV YN LL   CKAG  ++A+     M+    TPD +S+  ++  LC + +   A
Sbjct: 439 GSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGA 498

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
             ++Q +V      +  ++ +++D L   G    A++L + ++ +    D V + + + G
Sbjct: 499 HAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCKP---DFVMHKMVLDG 555

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           L + G+ E+A  +  +M     P +A+TY  ++    K   +   ++L+ D  +      
Sbjct: 556 LCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKARQLVDDASET----- 610

Query: 567 YHTSIR 572
            HTS+ 
Sbjct: 611 -HTSVE 615



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 109/457 (23%), Positives = 215/457 (47%), Gaps = 32/457 (7%)

Query: 158 NIVMDVLFKIGRVDLGIKVL-----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            +V +VL  +G++   +++      ++    +  ++N  L  L K N      +    M 
Sbjct: 6   TVVGEVLRHLGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQ 65

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
           R+G+ P+   + I+L   CK G + +A +LLG +   G  L+V  ++V+IDG  +  R+D
Sbjct: 66  RRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVD 125

Query: 273 MAGYLWEKMVQNG-CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
            A  +++ M   G C P+VVT+ SL+KG    +  S AF   + +   G  P+++ ++ L
Sbjct: 126 DALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTL 185

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLVCGLE 387
           +D L K G  D+A  +++ ++E   VPD   + S ++ +C + R +       K+V    
Sbjct: 186 LDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTK-G 244

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
            +AD V ++ ++   CK G   +A    N M++                LC +  +DEA 
Sbjct: 245 SKADAVAFSTVIGILCKKGHAEEA---QNQMIEH---------------LCRSGMLDEAC 286

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR--AIVEKY-PLDVVSYTVAI 504
             ++ ++  N   +A +   ++  + ++ R    + LF+R  ++ E Y P ++ +Y + +
Sbjct: 287 KTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMV 346

Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
             L +  + +EA  L ++M +  + P+  TY  ++   CK   +     LL+++    + 
Sbjct: 347 DNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVF 406

Query: 565 LDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            D  T   +   + K      A++ L  M   G  PD
Sbjct: 407 PDSFTDASILNALSKAGKVDYALSHLETMKARGSTPD 443



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/170 (20%), Positives = 77/170 (45%), Gaps = 2/170 (1%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           K R    D+ +++ ++  + +  GR +     + ++    C     ++ + +    R   
Sbjct: 436 KARGSTPDLVTYNTLLDGLCK-AGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQ 494

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-PNFLSFNIALC 193
                  F EM + G  P+T   + ++D L + G  DL +++LK +   P+F+   + L 
Sbjct: 495 AAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCKPDFVMHKMVLD 554

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
            LCK     +  +V+  M   GF  +   +  +++   K+G++ +A QL+
Sbjct: 555 GLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKARQLV 604


>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
 gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 135/553 (24%), Positives = 241/553 (43%), Gaps = 55/553 (9%)

Query: 103 VRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMD 162
            R ++ +  ++G V    +F + +  Y         L+  ++M  FG  P+T + N ++D
Sbjct: 197 ARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILD 256

Query: 163 VLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYP 218
            L K   +    DL + +  +   PN  ++N+ +C  C+L  +     VI +M R    P
Sbjct: 257 ALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLP 316

Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
            V  + +L+N FC  G+I EA+++   M  +     V  +  LIDG  + R       L 
Sbjct: 317 TVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLI 376

Query: 279 EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
           E+M + G   N VTY  ++K   +    + A + LD +E  G +PD V +N LI    K 
Sbjct: 377 EEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKA 436

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVY 395
           G    A  + D +    L  D++T  ++L  +C+  +      L+C         D V Y
Sbjct: 437 GKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSY 496

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN-----VY 450
             L+  + K    ++A+ L++ M ++   P   ++  ++ GLC +RK+D+AI+     + 
Sbjct: 497 GILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLE 556

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIE------------------------------AGRCHK 480
            G+V +    N  +H   ++  +E                               G   K
Sbjct: 557 NGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEK 616

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
           A++LF   + +   +DVV+Y   I  L + G+ E AY L ++M+   + P+ YTY+V++ 
Sbjct: 617 ALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIA 676

Query: 541 SFCKERNIKMVKRLLQDVIDARIELDYH----------TSIRLTKFIFKFHSSSSAVNQL 590
           +      IK  +     ++++ I  D +          TS     F FK  + S  +N  
Sbjct: 677 ALTDAGRIKEAEEFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQIN-- 734

Query: 591 VEMCNLGLIPDEM 603
            E+CN     D M
Sbjct: 735 -ELCNQHKYKDAM 746



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 102/433 (23%), Positives = 180/433 (41%), Gaps = 39/433 (9%)

Query: 130 WR--GEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LP 183
           WR   E+Y ++    +EM + G   N    NI++  + K G +      L + +     P
Sbjct: 366 WRDSSEVYSLI----EEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSP 421

Query: 184 NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
           + +++N  +   CK   +     ++  M  KG   +      +L+C C   ++ EAY LL
Sbjct: 422 DCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLL 481

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
                 G  L   ++ +LI G+ +  + D A  LW++M +    P+ +TY S+I G  ++
Sbjct: 482 CSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQS 541

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
           +    A   L+ +   G  PD   +N++I      G+ + A   ++ ++E    PD YT 
Sbjct: 542 RKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTC 601

Query: 364 CSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
             LL  +C  G      KL   L  +    D+V YN ++S  CK G    A  L   M  
Sbjct: 602 NILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEA 661

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH- 479
           K   PD Y++  ++  L  A +I EA                        +++E+G  H 
Sbjct: 662 KKLGPDQYTYKVIIAALTDAGRIKEA-------------------EEFTLKMVESGIVHD 702

Query: 480 ------KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
                 K   +    + E +    ++Y+  I  L    + ++A  L+ ++    V  N Y
Sbjct: 703 QNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMHLFVEVTKEGVALNKY 762

Query: 534 TYRVMLLSFCKER 546
           TY  ++    K R
Sbjct: 763 TYLNLMEGLIKRR 775



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 71/389 (18%), Positives = 148/389 (38%), Gaps = 35/389 (8%)

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRL---RRLDMA 274
           P+  + +  +  + +M +   A Q+   M  L    ++     L++   R      + +A
Sbjct: 138 PSKELLDTSIGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLA 197

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             + +  ++ G  PN  ++  LI G+        A  +++ +   G  PD V +N ++D 
Sbjct: 198 RQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDA 257

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVV 394
           L K     +A D+   +    L P+ +T+                  LVCG         
Sbjct: 258 LLKRRLLQEARDLLLDMKSKGLSPNKHTY----------------NMLVCG--------- 292

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
                  +C+ G   +A K+   M      P  +++  L+ G C   KIDEA  +   + 
Sbjct: 293 -------YCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEME 345

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
             N   +   +  ++D   +     +   L      +    + V+Y + ++ + + G   
Sbjct: 346 KMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMT 405

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLT 574
           EA     +M+   + P+  TY  ++ ++CK   +    R++ ++    +++D  T   + 
Sbjct: 406 EATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTIL 465

Query: 575 KFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
             +        A N L      G I DE+
Sbjct: 466 HCLCVEKKLDEAYNLLCSASKRGYILDEV 494


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 123/493 (24%), Positives = 230/493 (46%), Gaps = 24/493 (4%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFL 186
           RG +     E + EM R   +PN +  NI++     +G +  G+    E +    LPN +
Sbjct: 191 RGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVV 250

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           ++N  +   CK+  +     ++  M  KG  PN+  + +++N  C+ G + EA+++L  M
Sbjct: 251 TYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEM 310

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
              G +     +  L++G+ +      A  +  +MV+NG SP+VVTYT+LI    +A+  
Sbjct: 311 GYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNL 370

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
           + A  F D +   G  P+   +  LID  S+ G  ++A  + + + E    P   T+ + 
Sbjct: 371 NRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAF 430

Query: 367 LSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           +   C+  R      +V  +    +  D+V Y+ ++S FC+ G  ++A ++   M++KG 
Sbjct: 431 IHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGV 490

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
           +PD  ++  L++GLC  R++ EA ++ Q ++      +   +T +++     G  +KA+ 
Sbjct: 491 SPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALH 550

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           L    I + +  D V+Y+V I GL +  RT EA  L  ++ +    P+  TY   L+  C
Sbjct: 551 LHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDT-LIENC 609

Query: 544 KERNIKMVKRLLQD------------VIDARIELDYHTSIRLTKFIFKFHSSS----SAV 587
                K V  L++             V ++ +E ++     +   I   H        A 
Sbjct: 610 SNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAF 669

Query: 588 NQLVEMCNLGLIP 600
           N   EM + G +P
Sbjct: 670 NLYKEMIHSGFVP 682



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 139/589 (23%), Positives = 247/589 (41%), Gaps = 58/589 (9%)

Query: 71  IWCAKQRDYFHDVQSFDHMISVVTRLTGRFE-TVRGIVGELARVGCVIKAQTFLLFLRIY 129
           I  AK   +   V S++ ++  + R  G  + +   +  E+ R        T+ + +R +
Sbjct: 165 INLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGF 224

Query: 130 WRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNF 185
                    L  F EM R G  PN    N ++D   K+GR+D    +LK        PN 
Sbjct: 225 CSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNL 284

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGL 245
           +S+N+ +  LC+   +    +++  M  KGF P+   +  LLN +CK G   +A  +   
Sbjct: 285 ISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAE 344

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           M+  G S SV  +T LI+   + R L+ A   +++M   G  PN  TYT+LI GF    +
Sbjct: 345 MVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGL 404

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
            + A+  L+ +   G +P +V +N  I     +   ++AL V   ++E  L PD  ++ +
Sbjct: 405 LNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYST 464

Query: 366 LLSTVCLSGR----FSLLPKLV---------------------------CGLEVE----- 389
           ++S  C  G     F +  ++V                           C L  E     
Sbjct: 465 IISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMG 524

Query: 390 --ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
              D   Y  L++ +C  G  N+A+ L++ M+ KGF PD  ++  L+ GL    +  EA 
Sbjct: 525 LPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAK 584

Query: 448 NV---------------YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
            +               Y  ++ N   +      A++      G  H+A ++F   +   
Sbjct: 585 RLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERN 644

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVK 552
           +      Y V I G   GG   +A+ LY +M H    P+  T   ++ +  KE   + + 
Sbjct: 645 HKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMS 704

Query: 553 RLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            ++ D + +    +   +  L +   K  +  + +N L +M   GL+P+
Sbjct: 705 EVIGDTLRSCRLNEAELAKVLVEINHKEGNMEAVLNVLTDMAKDGLLPN 753



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/414 (25%), Positives = 186/414 (44%), Gaps = 44/414 (10%)

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKM-GRIA-EAYQLLGL 245
           F++ + +   LN +    + I +    GF P V  +  +L+   +  G +   A ++   
Sbjct: 145 FDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYRE 204

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           MI    S +V  + +LI GF  +  L      + +M +NGC PNVVTY +LI  + +   
Sbjct: 205 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 264

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
              AF  L  + S+G  P+L+ +NV+I+ L + GS  +A ++ + +      PD  T+ +
Sbjct: 265 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 324

Query: 366 LLSTVCLSGRFSLLPKLVCGLE-----VEADLVVYNALLSYFCKA--------------- 405
           LL+  C  G F     LV   E     V   +V Y AL++  CKA               
Sbjct: 325 LLNGYCKEGNFH--QALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRI 382

Query: 406 --------------------GFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
                               G  N+A ++ N M + GF+P   ++   + G C   +++E
Sbjct: 383 RGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEE 442

Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
           A+ V Q +V    A +   ++ I+      G   +A Q+ +  + +    D V+Y+  I+
Sbjct: 443 ALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQ 502

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           GL E  R  EA  L  +M  + +PP+ +TY  ++ ++C E ++     L  ++I
Sbjct: 503 GLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMI 556


>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
 gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana]
 gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 528

 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 221/444 (49%), Gaps = 13/444 (2%)

Query: 139 LEAFDEMGRFGFT------PNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSF 188
           +E  D +G FG        P+    + ++  + K+ + DL I   ++ ++     N  ++
Sbjct: 57  IELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTY 116

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           NI +   C+ + +S    ++G M++ G+ P++     LLN FC   RI++A  L+  M+ 
Sbjct: 117 NILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVE 176

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
           +G       +T LI G     +   A  L ++MVQ GC P++VTY +++ G  +     +
Sbjct: 177 MGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDL 236

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A + L+ +E+     ++V ++ +ID L K    DDAL+++  +    + P+  T+ SL+S
Sbjct: 237 ALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 296

Query: 369 TVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
            +C  GR+S   +L+  +   ++  +LV ++AL+  F K G   +A KLY  M+ +   P
Sbjct: 297 CLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDP 356

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           + +++  L+ G C   ++ EA  + + ++  +   N   +  +++   +A R  K ++LF
Sbjct: 357 NIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELF 416

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
           R         + V+YT  I G  +    + A +++ QM  + V PN  TY ++L   CK 
Sbjct: 417 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 476

Query: 546 RNIKMVKRLLQDVIDARIELDYHT 569
             +     + + +  + +E D +T
Sbjct: 477 GKLAKAMVVFEYLQRSTMEPDIYT 500



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 96/398 (24%), Positives = 182/398 (45%), Gaps = 3/398 (0%)

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
           + G+M +   +P++  F  LL+   KM +          M  LG S ++  + +LI+ F 
Sbjct: 65  LFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFC 124

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
           R  RL +A  L  KM++ G  P++VT  SL+ GF      S A + +D +   G+ PD V
Sbjct: 125 RCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTV 184

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL 386
               LI  L       +A+ + D +++    PD  T+ ++++ +C  G   L   L+  +
Sbjct: 185 TFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKM 244

Query: 387 E---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
           E   +EA++V+Y+ ++   CK    + A+ L+  M +KG  P+  ++  L+  LC   + 
Sbjct: 245 EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRW 304

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
            +A  +   ++      N    +A++D  ++ G+  KA +L+   I      ++ +Y+  
Sbjct: 305 SDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSL 364

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           I G     R  EA  +   M      PN  TY  ++  FCK + +     L +++    +
Sbjct: 365 INGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGL 424

Query: 564 ELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
             +  T   L    F+     +A     +M ++G+ P+
Sbjct: 425 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 462



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 124/245 (50%), Gaps = 4/245 (1%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK---ETQL-PNFLSFNIALC 193
            L  F EM   G  PN    + ++  L   GR     ++L    E ++ PN ++F+  + 
Sbjct: 272 ALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALID 331

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
              K   +   + +   M+++   PN+  +  L+N FC + R+ EA Q+L LMI      
Sbjct: 332 AFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLP 391

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
           +V  +  LI+GF + +R+D    L+ +M Q G   N VTYT+LI GF +A+    A    
Sbjct: 392 NVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 451

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
             + S G  P+++ +N+L+D L K G    A+ V++ L    + PD YT+  ++  +C +
Sbjct: 452 KQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKA 511

Query: 374 GRFSL 378
           G++ +
Sbjct: 512 GKWKM 516


>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 804

 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 142/560 (25%), Positives = 240/560 (42%), Gaps = 59/560 (10%)

Query: 48  LAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIV 107
           L+P IV   + N P+ L+   FFIW +K R       S + +I ++ +  G FE    ++
Sbjct: 57  LSPSIVTYIIKNPPNSLLGFRFFIWASKFRR-LRSWVSHNMIIDMLIKDNG-FELYWQVL 114

Query: 108 GELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK- 166
            E+ R G  I A  F + ++ Y + +M    +E+F+ M  F   P+ F  N V+ V+ + 
Sbjct: 115 KEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHVMVRK 174

Query: 167 -IGRVDLGI--KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMF 223
            +  + LGI  ++LK   LPN  +F+I +  +CK     N   +   M ++   PN   +
Sbjct: 175 EVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITY 234

Query: 224 EI-----------------------------------LLNCFCKMGRIAEAYQLLGLMIT 248
            I                                   LL+ FCK+GR+ EA  LL     
Sbjct: 235 TIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEK 294

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
               L    ++ LIDG  R RR + A   + KM ++   P+V+ YT ++KG  +A  F  
Sbjct: 295 DRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKD 354

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A   L+ +   G  PD   +N LI     +G  D+A  ++  + +      + T+  L+ 
Sbjct: 355 ALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILIC 414

Query: 369 TVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
            +C SG      ++   +E       +V +NAL+  FCKAG   +A  L+  M + G  P
Sbjct: 415 GMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKM-EIGRNP 473

Query: 426 --------------DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
                         D  S   ++  LC +  I +A N+   +  +  A N   +  ++  
Sbjct: 474 SLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHG 533

Query: 472 LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
             +AG  + A +LF+   ++    D V+Y   I GLL   R E+A+ +  Q+      P 
Sbjct: 534 FCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTPI 593

Query: 532 AYTYRVMLLSFCKERNIKMV 551
              Y+  +   C+   I + 
Sbjct: 594 TEVYKSFMTWSCRRNKITLA 613



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 116/502 (23%), Positives = 218/502 (43%), Gaps = 42/502 (8%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
           AL    +  K R Y  D Q +  +I  + R   RFE  +    ++           + + 
Sbjct: 285 ALGLLKYFEKDR-YVLDKQGYSCLIDGLFR-ARRFEDAQVWYRKMTEHNIKPDVILYTIM 342

Query: 126 LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD----LGIKVLKETQ 181
           ++   +   +   L   +EM   G  P+T   N ++     +G +D    L +++ K   
Sbjct: 343 MKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDC 402

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
             +  ++ I +C +C+   V + + +   M + G YP+V  F  L++ FCK G I +A Q
Sbjct: 403 FSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKA-Q 461

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY------------------LWEKMVQ 283
           LL   + +G + S+  +  L  G  R+  LD A                    +  ++  
Sbjct: 462 LLFYKMEIGRNPSL--FLRLSQGANRV--LDTASLQTMVEQLCDSGLILKAYNILMQLTD 517

Query: 284 NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
           +G +PN++TY  LI GF +A   + AF     L+ +G +PD V +  LI+ L      +D
Sbjct: 518 SGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREED 577

Query: 344 ALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNALL 399
           A  V D +L+    P +  + S ++  C   +    FSL  K +  +    D  V  ++ 
Sbjct: 578 AFTVLDQILKNGCTPITEVYKSFMTWSCRRNKITLAFSLWLKYLRSIPGR-DSEVLKSVE 636

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYS---FVGLLRGLCGARKIDEAINVYQGIVMN 456
             F K G   +AV+    +L+  F  +++    +   L GLC A +++EA+ ++  +  +
Sbjct: 637 ENFEK-GEVEEAVR---GLLEMDFKLNDFQLAPYTIWLIGLCQAGRLEEALKIFFTLEEH 692

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG-GRTEE 515
           N  V       ++ RL++ G    A ++F   I + Y L        ++ LL    +   
Sbjct: 693 NVLVTPPSCVKLIYRLLKVGNLDLAAEIFLYTIDKGYMLMPRICNRLLKSLLRSEDKRNR 752

Query: 516 AYILYSQMKHIAVPPNAYTYRV 537
           A+ L S+MK +    +++ ++ 
Sbjct: 753 AFDLLSRMKSLGYDLDSHLHQT 774



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/285 (21%), Positives = 133/285 (46%), Gaps = 11/285 (3%)

Query: 291 VTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDG 350
           V++  +I   ++   F + +  L  ++  G +       VLI   +KM   + A++ ++ 
Sbjct: 92  VSHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEM 151

Query: 351 LLELKLVPDSYTFCSLL------STVCLS-GRFSLLPKLVCGLEVEADLVVYNALLSYFC 403
           + +    PD +T+ ++L        V L+ G ++ + KL C      ++  ++ L+   C
Sbjct: 152 MKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNC----LPNIATFSILIDGMC 207

Query: 404 KAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAH 463
           K+G    A+++++ M  +   P+  ++  ++ GLC A+K D A  ++  +  +    ++ 
Sbjct: 208 KSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSV 267

Query: 464 VHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM 523
            + A++    + GR  +A+ L +    ++Y LD   Y+  I GL    R E+A + Y +M
Sbjct: 268 TYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKM 327

Query: 524 KHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
               + P+   Y +M+    K    K   RLL ++ +  +  D H
Sbjct: 328 TEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTH 372


>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
          Length = 584

 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 127/502 (25%), Positives = 230/502 (45%), Gaps = 16/502 (3%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFL 186
           R  M G V+  +D M + G  PN +  N+++  L +  RVD   K+L E       P+ +
Sbjct: 81  RENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEV 140

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           S    +  +CKL  V   +  +   V     P    +  +++  C   R+ E + ++  M
Sbjct: 141 SHGTIVSGMCKLGRVEEARGFLAETV-----PVQASYNAVVHALCGEFRMWEVFSVVNEM 195

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
           +  G   +V  +T ++D F + R L MA  +  +MV  GC+PNV+T+T+L+KGF E    
Sbjct: 196 VQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKV 255

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
             A S    +  EG AP  + +NVLI  L  +G    ALD ++ +    L+P++ T+ +L
Sbjct: 256 HDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTL 315

Query: 367 LSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           +     +G      L+   +     + ++VVY  ++   CK    +QA  L + ML    
Sbjct: 316 VDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNC 375

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
            P+  +F  L+  LC   ++  A+NV+ G+  N    N   +  ++  L   G    A  
Sbjct: 376 PPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFA 435

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           +    +   + L +V+Y   I  L +    + A +L  +M    + P+A+T+  ++ ++C
Sbjct: 436 MVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYC 495

Query: 544 KERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE- 602
           KE  + +   LL  +       +      L   +      S+A+  L++M   G+ P+E 
Sbjct: 496 KEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEA 555

Query: 603 MWRKL--GLLSD-ETMTPVSLF 621
            W  L   + ++  T+ P+ LF
Sbjct: 556 TWNVLVRAIFTNIGTIGPIHLF 577



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 78/365 (21%), Positives = 152/365 (41%), Gaps = 11/365 (3%)

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT-SLSVNAW 258
           DV  V+  +  M  +G           +  F + G    A +       LG     V  +
Sbjct: 13  DVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRDPGVRVY 72

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
             L+D   R   +     +++ M + G  PNV TY  LI+   +      A   LD +  
Sbjct: 73  NHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSR 132

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR--- 375
           +G  PD V H  ++  + K+G  ++A     G L  + VP   ++ +++  +C   R   
Sbjct: 133 KGCHPDEVSHGTIVSGMCKLGRVEEA----RGFLA-ETVPVQASYNAVVHALCGEFRMWE 187

Query: 376 -FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
            FS++ ++V    ++ ++V Y  ++  FCKA     A  +   M+  G TP+  +F  L+
Sbjct: 188 VFSVVNEMV-QRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALV 246

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
           +G     K+ +A++++  +V    A +   +  ++  L   G    A+  F         
Sbjct: 247 KGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALL 306

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
            +  +Y+  + G    G  + A +++++MK     PN   Y  M+   CK+      + L
Sbjct: 307 PNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESL 366

Query: 555 LQDVI 559
           +  ++
Sbjct: 367 IDKML 371


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 122/486 (25%), Positives = 229/486 (47%), Gaps = 12/486 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM--YGMVL 139
           DV++++ +IS + +  GR      +  E+   GCV    TF     IY  G++      +
Sbjct: 113 DVRTYNCLISTLGK-AGRLSEAFTLFAEMRERGCV--PDTFTYNSLIYGLGKVGRSQKAM 169

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNL 195
           E  +EM R G  P+    + ++  L K G      K+ +E +     P+ ++F   +  L
Sbjct: 170 ELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDAL 229

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
            K   V +  +++  M  +G  P V  +  L+  F K+G + EAY LL  M   G    V
Sbjct: 230 GKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDV 289

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
             ++ LI G  +  +LD A  + +KM + GC P+ +TY +LI G  +A + + A    D 
Sbjct: 290 VTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDR 349

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
           ++S+G  PD+V ++ LI  L K    + A  +++ +  + + PD +T+CS+++ +  +G+
Sbjct: 350 MKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQ 409

Query: 376 FSLLPKLVC---GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
                +L     G  +  D++ YNA L+   + G   +A K++  M + G  PD  ++  
Sbjct: 410 VDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDA 469

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           LL GL   +++D+A  + + ++    A ++      ++ L   G   +A +L + A  + 
Sbjct: 470 LLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKG 529

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVK 552
                 SY   I  L + GR  EA+     +K     P+  +Y  ++ +  +   I    
Sbjct: 530 LWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAF 589

Query: 553 RLLQDV 558
            LL+++
Sbjct: 590 ELLEEM 595



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 121/461 (26%), Positives = 212/461 (45%), Gaps = 8/461 (1%)

Query: 149 GF-TPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSN 203
           GF +PN    N +++ L K G+ +    + +E +     P+ +S++  + +L +      
Sbjct: 3   GFPSPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEA 62

Query: 204 VKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLID 263
             +V+  M  KG  PN+  +  L++C  K G+  EA +LL  M   G    V  +  LI 
Sbjct: 63  ALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLIS 122

Query: 264 GFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP 323
              +  RL  A  L+ +M + GC P+  TY SLI G  +      A   L+ +E  G  P
Sbjct: 123 TLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPP 182

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV 383
           D++ ++ LI  L K G    A  ++  +      PDS TF +L+  +  +GR     +L+
Sbjct: 183 DVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELL 242

Query: 384 CGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
             ++   V+  +V YNAL++ F K G   +A  L + M   G  PD  ++  L+ GL  A
Sbjct: 243 DEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKA 302

Query: 441 RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSY 500
            ++DEA  V + +       +   +  +++ L +AG  + A +LF R   +    DVV+Y
Sbjct: 303 SQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTY 362

Query: 501 TVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
           +  I  L +  R E A +L+ +M+ + + P+ +TY  ++    K   +    RL  ++  
Sbjct: 363 STLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRG 422

Query: 561 ARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
             +  D  T       + +      A     +M   GL+PD
Sbjct: 423 KGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPD 463



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 120/467 (25%), Positives = 212/467 (45%), Gaps = 42/467 (8%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
           F+E+    +TP+  + + +++ L + G+ +  ++V+ E Q     PN  ++N  +  L K
Sbjct: 32  FEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGK 91

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
                    ++  M   G  P+VR +  L++   K GR++EA+ L   M   G       
Sbjct: 92  AGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFT 151

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  LI G  ++ R   A  L E+M ++GC P+V+TY+SLI G  +      AF     ++
Sbjct: 152 YNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMK 211

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-- 375
             G  PD +    L+D L K G  DDAL++ D + E  + P   T+ +L++     G   
Sbjct: 212 RRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLV 271

Query: 376 --FSLLPK---------------LVCGL----------------EVEA---DLVVYNALL 399
             ++LL +               L+ GL                E E    D + YN L+
Sbjct: 272 EAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLI 331

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
           +   KAG  N A +L++ M  KG  PD  ++  L+  L  A +++ A  +++ +      
Sbjct: 332 NGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQ 391

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            +   + +I+  L +AG+   A +LF     +    DV++Y   +  L  GGR +EA  +
Sbjct: 392 PDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKI 451

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           +  MK   + P+  TY  +LL   K + +     LL+++I+     D
Sbjct: 452 FEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFD 498



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 107/479 (22%), Positives = 202/479 (42%), Gaps = 78/479 (16%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           ++R    D  +++ +I  + ++ GR +    ++ E+ R GC     T+   +    +   
Sbjct: 141 RERGCVPDTFTYNSLIYGLGKV-GRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGE 199

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNI 190
                + F EM R G  P++     +MD L K GRVD  +++L E +     P  +++N 
Sbjct: 200 TVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNA 259

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +    K+ D+    +++  M R G  P+V  +  L+    K  ++ EA Q+L  M   G
Sbjct: 260 LIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEG 319

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
                  +  LI+G  +   L+ AG L+++M   GC+P+VVTY++LI    +A     A 
Sbjct: 320 CPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESAC 379

Query: 311 SFLDMLES-----------------------------------EGHAPDLVFHNVLIDCL 335
              + +ES                                   +G +PD++ +N  ++ L
Sbjct: 380 VLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSL 439

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLL----STVCLSGRFSLLPKLV---CG--- 385
            + G + +A  +++ + E  L+PD  T+ +LL     T  +     LL +L+   C    
Sbjct: 440 GRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDS 499

Query: 386 ------LEV--------EADLVV--------------YNALLSYFCKAGFPNQAVKLYNT 417
                 LE+        EA  ++              YNAL+    KAG  ++A      
Sbjct: 500 LKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLED 559

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
           + ++G  PD  S+  L+  L    +ID A  + + +      ++   ++ +V +L + G
Sbjct: 560 LKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKLQDWG 618


>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
          Length = 637

 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 127/502 (25%), Positives = 230/502 (45%), Gaps = 16/502 (3%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFL 186
           R  M G V+  +D M + G  PN +  N+++  L +  RVD   K+L E       P+ +
Sbjct: 134 RENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEV 193

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           S    +  +CKL  V   +  +   V     P    +  +++  C   R+ E + ++  M
Sbjct: 194 SHGTIVSGMCKLGRVEEARGFLAETV-----PVQASYNAVVHALCGEFRMWEVFSVVNEM 248

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
           +  G   +V  +T ++D F + R L MA  +  +MV  GC+PNV+T+T+L+KGF E    
Sbjct: 249 VQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKV 308

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
             A S    +  EG AP  + +NVLI  L  +G    ALD ++ +    L+P++ T+ +L
Sbjct: 309 HDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTL 368

Query: 367 LSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           +     +G      L+   +     + ++VVY  ++   CK    +QA  L + ML    
Sbjct: 369 VDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNC 428

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
            P+  +F  L+  LC   ++  A+NV+ G+  N    N   +  ++  L   G    A  
Sbjct: 429 PPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFA 488

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           +    +   + L +V+Y   I  L +    + A +L  +M    + P+A+T+  ++ ++C
Sbjct: 489 MVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYC 548

Query: 544 KERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE- 602
           KE  + +   LL  +       +      L   +      S+A+  L++M   G+ P+E 
Sbjct: 549 KEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEA 608

Query: 603 MWRKL--GLLSD-ETMTPVSLF 621
            W  L   + ++  T+ P+ LF
Sbjct: 609 TWNVLVRAIFTNIGTIGPIHLF 630



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 79/370 (21%), Positives = 153/370 (41%), Gaps = 11/370 (2%)

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT-SL 253
           L    DV  V+  +  M  +G           +  F + G    A +       LG    
Sbjct: 61  LAAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRDP 120

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
            V  +  L+D   R   +     +++ M + G  PNV TY  LI+   +      A   L
Sbjct: 121 GVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKML 180

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           D +  +G  PD V H  ++  + K+G  ++A     G L  + VP   ++ +++  +C  
Sbjct: 181 DEMSRKGCHPDEVSHGTIVSGMCKLGRVEEA----RGFLA-ETVPVQASYNAVVHALCGE 235

Query: 374 GR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
            R    FS++ ++V    ++ ++V Y  ++  FCKA     A  +   M+  G TP+  +
Sbjct: 236 FRMWEVFSVVNEMV-QRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLT 294

Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
           F  L++G     K+ +A++++  +V    A +   +  ++  L   G    A+  F    
Sbjct: 295 FTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMK 354

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
                 +  +Y+  + G    G  + A +++++MK     PN   Y  M+   CK+    
Sbjct: 355 RNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFD 414

Query: 550 MVKRLLQDVI 559
             + L+  ++
Sbjct: 415 QAESLIDKML 424


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 128/484 (26%), Positives = 229/484 (47%), Gaps = 27/484 (5%)

Query: 136 GMVLEAFD---EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSF 188
           G + +A++   ++GRFGF PN F  N +++ L K G +D    +     L    PN +++
Sbjct: 344 GKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITY 403

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           +I + + C+   +         M++ G    V  +  L+N  CK G ++ A  L   M  
Sbjct: 404 SILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTN 463

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
            G   +   +T LI G+ +  ++  A  L+ KM+ NG +PNV T+T+LI G       + 
Sbjct: 464 KGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAE 523

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A    D L      P  V +NVLI+   + G  D A ++ + + +  LVPD+YT+  L+S
Sbjct: 524 ASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLIS 583

Query: 369 TVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
            +C +GR S     +  L    V+ + + Y+ALL  +C+ G   +A+     M+ +G   
Sbjct: 584 GLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINM 643

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           D      L+ G           ++ + +       +  ++T+++D   + G   KA + +
Sbjct: 644 DLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECW 703

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
              + E+   +VV+YT  + GL + G  + A +L+ +M+   VPPN+ TY   L +  KE
Sbjct: 704 DLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKE 763

Query: 546 RNIK--------MVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLG 597
            N+K        M+K LL + +   I       IR    + +FH ++  ++++ E    G
Sbjct: 764 GNMKEAIGLHHAMLKGLLANTVTHNI------IIRGFCKLGRFHEATKVLSEMTEN---G 814

Query: 598 LIPD 601
           + PD
Sbjct: 815 IFPD 818



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 97/388 (25%), Positives = 182/388 (46%), Gaps = 5/388 (1%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+  + +  + ++C+L D    K+ I  M   GF  ++  + +L++  CK  R++EA ++
Sbjct: 223 PDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEV 282

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
              +   G +  V  +  L+ GF RL++ +    L ++MV+ G SP     + L+ G  +
Sbjct: 283 KRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRK 342

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
                 A+  +  +   G  P+L  +N LI+ L K G  D A  +Y  +  + L P+  T
Sbjct: 343 QGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGIT 402

Query: 363 FCSLLSTVCLSGRF----SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           +  L+ + C SGR     S   +++    +   +  YN+L++  CK G  + A  L+  M
Sbjct: 403 YSILIDSFCRSGRLDVAISYFDRMIQD-GIGETVYAYNSLINGQCKFGDLSAAESLFIEM 461

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
            +KG  P   +F  L+ G C   ++ +A  +Y  ++ N    N +  TA++  L    + 
Sbjct: 462 TNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKM 521

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            +A +LF   +  K     V+Y V I G    G+ ++A+ L   M    + P+ YTYR +
Sbjct: 522 AEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPL 581

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELD 566
           +   C    +   K  + D+    ++L+
Sbjct: 582 ISGLCSTGRVSKAKDFIDDLHKQNVKLN 609



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 113/514 (21%), Positives = 218/514 (42%), Gaps = 43/514 (8%)

Query: 95  RLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNT 154
           R  G+ +    +V ++ R G V     +   +    +G         +  M      PN 
Sbjct: 341 RKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNG 400

Query: 155 FARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGM 210
              +I++D   + GR+D+ I    +++++       ++N  +   CK  D+S  + +   
Sbjct: 401 ITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIE 460

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M  KG  P    F  L++ +CK  ++ +A++L   MI  G + +V  +T LI G     +
Sbjct: 461 MTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNK 520

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           +  A  L++++V+    P  VTY  LI+G+        AF  L+ +  +G  PD   +  
Sbjct: 521 MAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRP 580

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF-------------S 377
           LI  L   G    A D  D L +  +  +   + +LL   C  GR               
Sbjct: 581 LISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRG 640

Query: 378 LLPKLVC-------------------------GLEVEADLVVYNALLSYFCKAGFPNQAV 412
           +   LVC                            +  D V+Y +++  + K G   +A 
Sbjct: 641 INMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAF 700

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
           + ++ M+ +   P+  ++  L+ GLC A ++D A  +++ +   N   N+  +   +D L
Sbjct: 701 ECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNL 760

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
            + G   +AI L   A+++    + V++ + IRG  + GR  EA  + S+M    + P+ 
Sbjct: 761 TKEGNMKEAIGL-HHAMLKGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDC 819

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
            TY  ++  +C+  N+    +L   +++  +E D
Sbjct: 820 VTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPD 853



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 88/365 (24%), Positives = 165/365 (45%), Gaps = 48/365 (13%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNL 195
           E FDE+      P     N++++   + G++D   ++L++      +P+  ++   +  L
Sbjct: 526 ELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGL 585

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
           C    VS  KD I  + ++    N   +  LL+ +C+ GR+ EA      MI  G ++ +
Sbjct: 586 CSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDL 645

Query: 256 NAWTVLIDG----------FRRLRRLDMAGY-------------------------LWEK 280
               VLIDG          F  L+ +   G                           W+ 
Sbjct: 646 VCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDL 705

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           MV   C PNVVTYT+L+ G  +A     A      +++    P+ + +   +D L+K G+
Sbjct: 706 MVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGN 765

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNA 397
             +A+ ++  +L+  L+ ++ T   ++   C  GRF    K++  +       D V Y+ 
Sbjct: 766 MKEAIGLHHAMLK-GLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYST 824

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN-----VYQG 452
           L+  +C++G    +VKL++TML++G  PD  ++  L+ G C   ++D+A       + +G
Sbjct: 825 LIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRG 884

Query: 453 IVMNN 457
           I+ +N
Sbjct: 885 IIPDN 889



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 90/385 (23%), Positives = 168/385 (43%), Gaps = 5/385 (1%)

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           F +L+  +    RI +A  ++ LM        V   + L++G  ++R+      L+++ V
Sbjct: 158 FNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWELFDESV 217

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
             G  P+  T +++++   E K F  A   +  +E+ G    +V +NVLI  L K     
Sbjct: 218 NAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVS 277

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLVCGLEVEADLVVYNAL 398
           +A++V   L    L  D  T+C+L+   C   +F     L+ ++V  L         + L
Sbjct: 278 EAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMV-ELGFSPTEAAVSGL 336

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           +    K G  + A +L   +   GF P+ + +  L+  LC    +D+A  +Y  + + N 
Sbjct: 337 VDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNL 396

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
             N   ++ ++D    +GR   AI  F R I +     V +Y   I G  + G    A  
Sbjct: 397 RPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAES 456

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
           L+ +M +  V P A T+  ++  +CK+  ++   +L   +ID  I  + +T   L   + 
Sbjct: 457 LFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLC 516

Query: 579 KFHSSSSAVNQLVEMCNLGLIPDEM 603
             +  + A     E+    + P E+
Sbjct: 517 STNKMAEASELFDELVERKIKPTEV 541


>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 124/502 (24%), Positives = 223/502 (44%), Gaps = 30/502 (5%)

Query: 65   IALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGR---FETVRGIVGELARVG------- 114
            +AL F  W  KQ     +++   HM  +   +  +   +++ + I+  L ++G       
Sbjct: 843  LALKFLKWVIKQPGL--ELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMGIGSKSIF 900

Query: 115  ---------CVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
                     C      F L +R+Y +  M    +E F+ +G  GF P+ +  N+++  + 
Sbjct: 901  GALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMV 960

Query: 166  KIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
            K  R +L   + +E       PN  +FNI +  LC   ++    +++  M   GF P + 
Sbjct: 961  KDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIV 1020

Query: 222  MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
             +  LLN +CK GR   A +L+  MI  G    V  + V ID      R   A  L +KM
Sbjct: 1021 TYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKM 1080

Query: 282  VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
             +   SPN VTY +LI GF++     +A    + +     +P+ V +N LI     +G +
Sbjct: 1081 RKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDF 1140

Query: 342  DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVV----YNA 397
            ++AL + D +    L  +  T+ +LL+ +C   +F L  +L+  + V  D+VV    Y  
Sbjct: 1141 EEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVN-DMVVGHIAYTV 1199

Query: 398  LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
            L+   CK G  ++AV+L   M   G  PD  ++  L+ G C    I  A  +   +  + 
Sbjct: 1200 LIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSG 1259

Query: 458  PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAY 517
              +N  +++ ++    + G   +A++++       +  D  +  V +  L   G+  EA 
Sbjct: 1260 LVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAE 1319

Query: 518  ILYSQMKHIAVPPNAYTYRVML 539
                 M  I + PN+ TY  ++
Sbjct: 1320 KFLCHMSRIGLVPNSITYDCII 1341



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 103/418 (24%), Positives = 188/418 (44%), Gaps = 10/418 (2%)

Query: 138  VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF----LSFNIALC 193
             L   D M   G   N      +++ L K  + +L  ++L+  ++ +     +++ + + 
Sbjct: 1143 ALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLID 1202

Query: 194  NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
             LCK   +     ++G M + G  P+V  +  L+N FC++G I  A +++  M   G  L
Sbjct: 1203 GLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVL 1262

Query: 254  SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
            +   ++ LI  F +   +  A  ++  M  NG   +  T   L+           A  FL
Sbjct: 1263 NKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFL 1322

Query: 314  DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
              +   G  P+ + ++ +I+    +G   +A   +D +++    P  +T+ SLL  +C  
Sbjct: 1323 CHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKG 1382

Query: 374  GRFSLLPKLVCGLEV---EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
            G      K +  L       D V+YN LL+  CK+G  ++AV L++ M+     PD+Y++
Sbjct: 1383 GNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTY 1442

Query: 431  VGLLRGLCGARKIDEAINVYQGIVMNNPAV--NAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
              LL GLC   K   A+ ++ G  M    +  N  ++T +VD L +AG    A   F   
Sbjct: 1443 SSLLTGLCRKGKAVTAVCLF-GTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEM 1501

Query: 489  IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
            + +    D V++   I      G+  +A   +S M+   V PN  TY ++L  F K++
Sbjct: 1502 MKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQ 1559



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 96/421 (22%), Positives = 180/421 (42%), Gaps = 9/421 (2%)

Query: 215  GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
            GF P+V    ++L    K  R    + L   M   G   +V  + +LI+G      L  A
Sbjct: 944  GFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKA 1003

Query: 275  GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
            G L ++M +NG  P +VTY +L+  + +   +  A   +D +  +G   D+  +NV ID 
Sbjct: 1004 GNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDN 1063

Query: 335  LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEAD 391
            L        A  +   + +  + P+  T+ +L++     G+  +  ++   +   ++  +
Sbjct: 1064 LCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPN 1123

Query: 392  LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
             V YNAL+   C  G   +A++L + M   G   +  ++  LL GLC   K + A  + +
Sbjct: 1124 CVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLE 1183

Query: 452  GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
             + +N+  V    +T ++D L + G   +A+QL      +    DV++Y+  I G    G
Sbjct: 1184 RMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVG 1243

Query: 512  RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSI 571
              + A  +  +M    +  N   Y  ++ +FC+  N+    ++   +       D+ T  
Sbjct: 1244 NIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCN 1303

Query: 572  RLTKFIFKFHSSSSAVNQLVEMCNLGLIP-----DEMWRKLGLLSDETMTPVSLFDGFVP 626
             L   + +      A   L  M  +GL+P     D +    G + D  +   S FD  + 
Sbjct: 1304 VLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGD-PLNAFSFFDDMIK 1362

Query: 627  C 627
            C
Sbjct: 1363 C 1363



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/337 (24%), Positives = 155/337 (45%), Gaps = 3/337 (0%)

Query: 222  MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            +F++L+  + K G I  A +   L+  +G   SV    +++    + +R ++   L+ +M
Sbjct: 916  VFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREM 975

Query: 282  VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
               G  PNV T+  LI G         A + L  +E  G  P +V +N L++   K G Y
Sbjct: 976  SDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRY 1035

Query: 342  DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNAL 398
              A+++ D ++   +  D  T+   +  +C + R +   LL K +    +  + V YN L
Sbjct: 1036 KAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTL 1095

Query: 399  LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
            ++ F K G    A +++N M     +P+  ++  L+ G C     +EA+ +   +     
Sbjct: 1096 INGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGL 1155

Query: 459  AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
             +N   +  +++ L +  +   A +L  R  V    +  ++YTV I GL + G  +EA  
Sbjct: 1156 RLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQ 1215

Query: 519  LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
            L   M    V P+  TY  ++  FC+  NIK  K ++
Sbjct: 1216 LVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEII 1252



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 81/326 (24%), Positives = 148/326 (45%), Gaps = 20/326 (6%)

Query: 131  RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK----IGRVDLGIKVLKETQLPNFL 186
            RG+M     + F  M  +G  PN    NI++    K    +  + L   +++E   P+ L
Sbjct: 1523 RGQMMK-ANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKL 1581

Query: 187  SFNIALCNLCKLNDVSNVKDV----IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
            +F+  +  L K    S + D+    +G M+ +G   +   F IL+N + + G++ +A+ L
Sbjct: 1582 TFHSLILGLSK----SGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDL 1637

Query: 243  LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
            +  M TLG     + +  + +G  +      +  +  +M++NG  P    Y +LI G   
Sbjct: 1638 VNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCR 1697

Query: 303  AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
                  AF   D +E+ G     V  + ++  L   G  +DA+ V D +L ++L+P   T
Sbjct: 1698 VGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIAT 1757

Query: 363  FCSLLSTVCLSGRFSLLPKL-----VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
            F +L+   C   + +   KL     +CGL++  D+V YN L+   C  G    A +LY  
Sbjct: 1758 FTTLMHRFCRDAKIAEALKLKGVMELCGLKL--DVVAYNVLIMGMCANGDSAAAFELYEE 1815

Query: 418  MLDKGFTPDNYSFVGLLRGLCGARKI 443
            M  +   P+  ++  L+  +  A  +
Sbjct: 1816 MRHRDLCPNITTYAVLVDAISAANNL 1841



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 93/420 (22%), Positives = 172/420 (40%), Gaps = 40/420 (9%)

Query: 145  MGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLND 200
            MGR    PN      ++D L K G          +++K+   P+ ++FN  + +  +   
Sbjct: 1466 MGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQ 1525

Query: 201  VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
            +    D    M   G  PN+  + ILL+ F K   +     L   M+  G       +  
Sbjct: 1526 MMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHS 1585

Query: 261  LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
            LI G  +    D+   L  KM+  G   +  T+  LI  + E+     AF  ++ + + G
Sbjct: 1586 LILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLG 1645

Query: 321  HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
              PD   +N + + L+K  ++ ++  V   +LE  ++P    + +L++ +          
Sbjct: 1646 VFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGM---------- 1695

Query: 381  KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
                                  C+ G    A KL + M   GF     +   ++RGL   
Sbjct: 1696 ----------------------CRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHC 1733

Query: 441  RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE--KYPLDVV 498
             K ++A+ V   ++           T ++ R     +  +A++L  + ++E     LDVV
Sbjct: 1734 GKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKL--KGVMELCGLKLDVV 1791

Query: 499  SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
            +Y V I G+   G +  A+ LY +M+H  + PN  TY V++ +     N+   ++LL D+
Sbjct: 1792 AYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDL 1851



 Score = 42.7 bits (99), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 48/213 (22%), Positives = 90/213 (42%), Gaps = 12/213 (5%)

Query: 397  ALLSYFCKAGFPNQAVKLYNTMLDK----GFTPDNYSFVGLLRGLCGARKIDEAINVYQ- 451
            ++L + C+ G  ++++  +  ++D        P  +    L+R       ID A+  ++ 
Sbjct: 884  SILRHLCQMGIGSKSI--FGALMDTYPLCNSIPSVFDL--LIRVYLKEGMIDYAVETFEL 939

Query: 452  -GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
             G+V   P+V  +    I+  +++  R      LFR    +    +V ++ + I GL   
Sbjct: 940  VGLVGFKPSV--YTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVE 997

Query: 511  GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
            G  ++A  L  QM+     P   TY  +L  +CK+   K    L+  +I   IE D  T 
Sbjct: 998  GNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTY 1057

Query: 571  IRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
                  +   H S+ A   L +M    + P+E+
Sbjct: 1058 NVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEV 1090


>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 821

 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 142/618 (22%), Positives = 267/618 (43%), Gaps = 70/618 (11%)

Query: 48  LAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMIS--VVTRLTGRFETVRG 105
           L PH V   +    +   AL FF W +K+  Y HD+  F  M++  V  ++    + VR 
Sbjct: 69  LRPHHVSKIINTHINTDTALQFFYWISKRHFYKHDMGCFVSMLNRLVKDKILAPADHVRI 128

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFD----EMGRF------------- 148
           ++ +  R    +K  T  L         ++G  L +F+    ++G+F             
Sbjct: 129 LMIKACRNEDELKRVTDFLHGISSSDSGLFGFTLYSFNTLLLQLGKFDMVTSAQNVYAQI 188

Query: 149 ---GFTPNTFARNIVMDVLFKIGRVDLGI------------------------------- 174
              G  P+    N ++++L K G+V   +                               
Sbjct: 189 FSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKL 248

Query: 175 --------KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEIL 226
                   +++K+   PN ++++  +  LC    +    D++  M  KG  P V  + + 
Sbjct: 249 DKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVP 308

Query: 227 LNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGC 286
           ++  C +GR+ +A  L+  M   G S SV  +T +I G  R  ++++A  ++ KM++ G 
Sbjct: 309 ISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGL 368

Query: 287 SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALD 346
            PN VTY +LI        F IA    D +E  G   +   +N +I  L  M   + A+ 
Sbjct: 369 VPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMV 428

Query: 347 VYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFC 403
           V++ +L+    P   T+ +L+      G  +   + +  ++    E D   Y  L+S FC
Sbjct: 429 VFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFC 488

Query: 404 KAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAH 463
           K G  + A   +  ML  G +P+ +++  ++ G C   KID A+++++ +  N  + +  
Sbjct: 489 KGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIE 548

Query: 464 VHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM 523
            + AI+  L +  R  +A +   +   +    + ++YT  I GL +   T  A+ ++ +M
Sbjct: 549 TYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEM 608

Query: 524 KHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSS 583
           +     PNA+TY  ++   C+E  +   +RL ++  +  I+    T   L   + +    
Sbjct: 609 EKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTENGCEPTID----TYSTLVSGLCR-EGR 663

Query: 584 SSAVNQLVE-MCNLGLIP 600
           S+  +QLVE M   GL P
Sbjct: 664 SNEASQLVENMKEKGLSP 681



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 113/467 (24%), Positives = 226/467 (48%), Gaps = 8/467 (1%)

Query: 83  VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF 142
           VQ++  +IS + R  G+ E   G+  ++ + G V    T+   +        +G+ L+ F
Sbjct: 337 VQTYTAIISGLFR-AGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIF 395

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKL 198
           D M   G   N    N ++  LF +  ++  +    K+LK+   P  +++N  +    K 
Sbjct: 396 DWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKR 455

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
             ++N    + MM      P+ R +  L++ FCK G++  A      M+  G S +   +
Sbjct: 456 GYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTY 515

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
           T +IDG+ +  ++D+A  L+E+M +NGCS ++ TY ++I G  +   FS A  F   +  
Sbjct: 516 TAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTE 575

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL 378
           +G  P+ + +  LI+ L K  + + A  ++  + +   +P+++T+ SL+  +C  G+   
Sbjct: 576 QGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDA 635

Query: 379 LPKLV-CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
             +L   G E   D   Y+ L+S  C+ G  N+A +L   M +KG +P    +  LL   
Sbjct: 636 AERLTENGCEPTID--TYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAH 693

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
           C + K+D A+ ++  + +     +  ++  ++  L    R  +A+ +F+  + +++  D+
Sbjct: 694 CKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDL 753

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
           + +TV + GLL+ G ++        M+     P+ +TY ++     K
Sbjct: 754 IVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSK 800



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 104/446 (23%), Positives = 196/446 (43%), Gaps = 11/446 (2%)

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           +   + + GC   + T+   +         G  ++  +EM   G  P  +   + +  L 
Sbjct: 254 VFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLC 313

Query: 166 KIGRVDLGIKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
            IGRVD  I ++    K+   P+  ++   +  L +   +     +   M+++G  PN  
Sbjct: 314 DIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTV 373

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            +  L+N  C  GR   A ++   M   GT  +   +  +I G   +  ++ A  ++ KM
Sbjct: 374 TYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKM 433

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
           +++G SP VVTY +LI   ++    + A  FL M++     PD   +  LI    K G  
Sbjct: 434 LKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKL 493

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNAL 398
           D A   +  +L+  + P+ +T+ +++   C  G+  +   L   +E     A +  YNA+
Sbjct: 494 DSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAI 553

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           +S   K    ++A K    M ++G  P+  ++  L+ GLC     + A  ++  +   N 
Sbjct: 554 ISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNC 613

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
             NAH +T+++  L + G+   A +L            + +Y+  + GL   GR+ EA  
Sbjct: 614 LPNAHTYTSLIYGLCQEGKVDAAERLTENGCEPT----IDTYSTLVSGLCREGRSNEASQ 669

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCK 544
           L   MK   + P+   Y  +L++ CK
Sbjct: 670 LVENMKEKGLSPSMEIYCSLLVAHCK 695



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/274 (18%), Positives = 119/274 (43%), Gaps = 1/274 (0%)

Query: 83  VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF 142
           +++++ +IS +++   RF        ++   G      T+   +    +     +  + F
Sbjct: 547 IETYNAIISGLSK-GNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIF 605

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVS 202
            EM +    PN      ++  L + G+VD   ++ +    P   +++  +  LC+    +
Sbjct: 606 HEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTENGCEPTIDTYSTLVSGLCREGRSN 665

Query: 203 NVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLI 262
               ++  M  KG  P++ ++  LL   CK  ++  A ++  LM   G    +  + VLI
Sbjct: 666 EASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLI 725

Query: 263 DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
                + R + A  +++ +++   + +++ +T L+ G ++     +   FL ++ES    
Sbjct: 726 CALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCT 785

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
           P L  + +L   LSK+G       + + L E+ L
Sbjct: 786 PSLHTYIILARELSKVGKSIGTDQIGNRLREVSL 819


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 115/430 (26%), Positives = 209/430 (48%), Gaps = 10/430 (2%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNL 195
           E F +M + GF P+  A N ++D L K G     +KVL     +  +P  +++ I + +L
Sbjct: 246 EVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSL 305

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
           CK   +   +++  +M   GF PN  ++  L++ F K GR+ EA  L   M+  G    V
Sbjct: 306 CKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDV 365

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
              TV+IDG  +    + A   +E+M++ GC PNVVTYT++I+G  +    + AF  +  
Sbjct: 366 ITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKG 425

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
           + + G  PD V +  L+D   K+G  D+A  + D L +    P+   + SL+  +C  G 
Sbjct: 426 MIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGS 485

Query: 376 F-SLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
             + L  L    +  A   D  +  +++   CK G  ++A +++  M+ +G  PD  ++ 
Sbjct: 486 VENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYN 545

Query: 432 GLLRGLCGAR--KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
            L+ GLC +R  +++ A  +   + M     +A  +T +   L + G   +A+++   A 
Sbjct: 546 ILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEAS 605

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
              +  DVV+YT    GL   G+ + A  L+ +M      P+A  Y  ++    K + ++
Sbjct: 606 SRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLE 665

Query: 550 MVKRLLQDVI 559
              +   ++I
Sbjct: 666 DACKFFDEMI 675



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 140/603 (23%), Positives = 265/603 (43%), Gaps = 24/603 (3%)

Query: 16  TQILKTIISFK------SIHQISSPKVCATTHQDFPIILAPHIVHSTLLNCPSDLIALSF 69
           T I++TI   +      S+H I +  V    H     +L  H+  + L +      A+SF
Sbjct: 52  TSIVETIKDVRLDGSSWSVHNIRN--VLGPVHGQ---VLGSHVA-AVLRSLKVTGTAISF 105

Query: 70  FIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIY 129
           F W  +Q  + HDV +++ +++++      +     I  E+ + G      +F + +R +
Sbjct: 106 FRWAGEQAGFQHDVFTYNCLMNLLV-AEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSF 164

Query: 130 WRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFN 189
            R       +  F+ M R    P+     I++D L K G  +   +V  E     F+  +
Sbjct: 165 ARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPD 224

Query: 190 IALCN-----LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLG 244
            AL       L K   V   ++V G M + GF P+   +  +++   K G   EA ++L 
Sbjct: 225 RALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLD 284

Query: 245 LMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
            M+      +   + +L++   +   L+ A  L+  M  +G  PN V YTSLI GF ++ 
Sbjct: 285 NMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSG 344

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
               A S  D +   G+ PD++ H V+ID L K G+++ A   ++ ++     P+  T+ 
Sbjct: 345 RMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYT 404

Query: 365 SLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
           +++  +   GR +   +++ G+       D V Y  LL  FCK G  ++A +L + +   
Sbjct: 405 TIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKC 464

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAI-NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
             +P+   +  L++GLC    ++  + ++++        ++  +  +I+  L + GR  +
Sbjct: 465 SSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDE 524

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEG--GRTEEAYILYSQMKHIAVPPNAYTYRVM 538
           A ++F+R + E    D  +Y + I GL      R E A+ L   ++ +   P+A TY  +
Sbjct: 525 ACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPL 584

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGL 598
            +  CK   +    ++L++        D      L   +        AV+   EM   G 
Sbjct: 585 CIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGG 644

Query: 599 IPD 601
            PD
Sbjct: 645 APD 647



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 114/463 (24%), Positives = 204/463 (44%), Gaps = 48/463 (10%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
           FDEM   G+ P+     +++D L K G  +   K  +E       PN +++   +  L K
Sbjct: 353 FDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSK 412

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
           +  V+N   ++  M+  G +P+   +  LL+ FCK+GR+ EA QLL  +    +S ++  
Sbjct: 413 IGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQL 472

Query: 258 WTVLIDG--------------FRRLR----------------------RLDMAGYLWEKM 281
           ++ L+ G              F + +                      RLD A  ++++M
Sbjct: 473 YSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRM 532

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSI--AFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
           V  GC P+  TY  LI G   ++   +  AF+ L  LE  G+ PD V +  L   L K+G
Sbjct: 533 VSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIG 592

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF----SLLPKLVCGLEVEADLVVY 395
             D A+ + +         D   + +L + +C  G+     SL  ++V       D   Y
Sbjct: 593 EVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMV-RQGGAPDAAAY 651

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
             +++   K      A K ++ M+ KG  P   ++  L++ LC A  +DEA + ++G++ 
Sbjct: 652 CCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLA 711

Query: 456 NNPAVNA-HVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
               V +  ++ A++    +A +   A++LF   I        V+      GL+  G+TE
Sbjct: 712 RGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTE 771

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
           +A  L  +M     PP+A T+  +L    K      + +L+Q+
Sbjct: 772 KAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKLVQE 814



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 94/409 (22%), Positives = 177/409 (43%), Gaps = 15/409 (3%)

Query: 90  ISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFG 149
           +S + R+   F  ++G++      GC   + T++  L  + +        +  DE+ +  
Sbjct: 410 LSKIGRVANAFRIMKGMIAH----GCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCS 465

Query: 150 FTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALC-----NLCKLNDVSNV 204
            +PN    + ++  L   G V+  +  L E       + +  LC      LCK   +   
Sbjct: 466 SSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEA 525

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKM--GRIAEAYQLLGLMITLGTSLSVNAWTVLI 262
             +   MV +G  P+   + IL+N  C+    R+  A+ LL  +  +G       +T L 
Sbjct: 526 CRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLC 585

Query: 263 DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
            G  ++  +D A  + E+    G + +VV YT+L  G         A S    +  +G A
Sbjct: 586 IGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGA 645

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSL 378
           PD   +  +I+ L K    +DA   +D ++     P   T+ +L+  +C +G     F  
Sbjct: 646 PDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHR 705

Query: 379 LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
              ++   E+   +++Y+AL+  FCKA   + A+KL+  M+ +G  P   +   L  GL 
Sbjct: 706 FEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLV 765

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
            + K ++A  + Q +       +A   TAI+D L ++    K ++L + 
Sbjct: 766 RSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKLVQE 814



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/346 (23%), Positives = 152/346 (43%), Gaps = 16/346 (4%)

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
           Q G   +V TY  L+   +  K +S  ++  + +   G AP+    N+LI   ++    D
Sbjct: 112 QAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRAD 171

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSG----RFSLLPKLVCGLEVEADLVVYNAL 398
           DA+  ++ +   +  PD +TF  L+  +C +G     F +  +++    V  D  ++ A+
Sbjct: 172 DAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAM 231

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           +    KA    +A +++  M   GF PD  ++  ++ GL  A    EA+ V   ++    
Sbjct: 232 VRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKAC 291

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
                 +  +V+ L +AG   +A +LFR      +  + V YT  I G  + GR +EA  
Sbjct: 292 VPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACS 351

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
           L+ +M      P+  T+ VM+   CK  N +   +  ++++    + +  T   + + + 
Sbjct: 352 LFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLS 411

Query: 579 KFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTPVSLFDGF 624
           K    ++A   +  M   G  PD            ++T + L DGF
Sbjct: 412 KIGRVANAFRIMKGMIAHGCFPD------------SVTYICLLDGF 445


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 117/477 (24%), Positives = 221/477 (46%), Gaps = 48/477 (10%)

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIK----VLKETQLPNFLSFNI 190
           Y  +   ++EM   G +P+ F  +I+ + L  + RV   +     +L+   +PN +++  
Sbjct: 107 YSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTT 166

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +  LC  + +S    +   M + G  PN   +  L+   C+ G +  A +L   M+   
Sbjct: 167 LIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDA 226

Query: 251 TSLSVN------AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
           +   VN       ++++IDG  ++ R D A  L+E+M   G  P+V++Y++LI GF  A 
Sbjct: 227 SQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAG 286

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
            +  +    D +  +G  PD+V  +VLID L K G   +A  + + +++  +VP+  T+ 
Sbjct: 287 KWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYN 346

Query: 365 SLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
           SL+   C+ G  +   +L   +    +E D + Y  L++ +CK     +A+ LYN ML  
Sbjct: 347 SLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQV 406

Query: 422 GFTPDNYSFVGLLRGLCGARKID-----------------------------------EA 446
           G +P+  ++  LL+GL    K+                                    EA
Sbjct: 407 GKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEA 466

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
           + ++  +   N  +N   ++ ++D L +AG+   A +LF +   E    DVV+Y + I G
Sbjct: 467 MELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHG 526

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
             + G+ + A IL+ +M+     P+   Y  +L  FC+   ++ V +LL  ++   +
Sbjct: 527 FCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDV 583



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 106/436 (24%), Positives = 202/436 (46%), Gaps = 11/436 (2%)

Query: 176 VLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGR 235
           +++   +P   SFN  L  L K+N  S +  +   M   G  P++    IL NC C + R
Sbjct: 82  MMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNR 141

Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
           ++EA   +  ++  G   +V  +T LI G     R+  A  L+ +M + GC+PN VTY +
Sbjct: 142 VSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGT 201

Query: 296 LIKGFMEAKMFSIAFSF-LDMLESEGH-----APDLVFHNVLIDCLSKMGSYDDALDVYD 349
           LIKG  +    +IA     +ML           P ++ ++++ID L K+G  D+A ++++
Sbjct: 202 LIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFE 261

Query: 350 GLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAG 406
            +    ++PD  ++ +L+   C +G++     L   +    V+ D+V ++ L+   CK G
Sbjct: 262 EMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEG 321

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
              +A KL   M+ +G  P+  ++  L+ G C    ++ A  ++  +       +   +T
Sbjct: 322 KVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYT 381

Query: 467 AIVDRLIEAGRCHKAIQLFRRAI-VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKH 525
            +++   +  +  +A+ L+   + V K P +V +Y   ++GL + G+  +A  L+  MK 
Sbjct: 382 TLINGYCKTWKVKEAMNLYNEMLQVGKSP-NVTTYGTLLKGLFQKGKVGDAKKLFGVMKT 440

Query: 526 IAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSS 585
             V  N+  Y + L   CK   +     L  ++     +L+      L   + K     +
Sbjct: 441 YGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLET 500

Query: 586 AVNQLVEMCNLGLIPD 601
           A     ++   GL PD
Sbjct: 501 AWELFEKLSQEGLQPD 516



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/455 (23%), Positives = 204/455 (44%), Gaps = 58/455 (12%)

Query: 87  DHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEM- 145
           +H IS  TRL  R +          ++GC   A T+   ++   +     + L+   EM 
Sbjct: 174 EHRISEATRLFLRMQ----------KLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEML 223

Query: 146 ---GRFGFT--PNTFARNIVMDVLFKIGRVDLGIKVLKETQL------------------ 182
               ++G    P     +I++D L K+GR D   ++ +E +                   
Sbjct: 224 NDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFC 283

Query: 183 ---------------------PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
                                P+ ++F++ +  LCK   V+  K ++ +M+++G  PN+ 
Sbjct: 284 CAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLI 343

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            +  L++ FC +G +  A +L   M + G      ++T LI+G+ +  ++  A  L+ +M
Sbjct: 344 TYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEM 403

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
           +Q G SPNV TY +L+KG  +      A     ++++ G + +   + + +D L K    
Sbjct: 404 LQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCL 463

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNAL 398
            +A+++++ L       +   +  L+  +C +G+     +L   L  E    D+V YN +
Sbjct: 464 FEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIM 523

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           +  FCK G  + A  L+  M + G TPD  ++  LL G C   K++E I +   +V  + 
Sbjct: 524 IHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDV 583

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           + NA   T +VD L +  +  K + L  +  V+++
Sbjct: 584 SPNAASCTIVVDMLCKDEKYKKFVDLLPKFPVQRH 618



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/337 (22%), Positives = 149/337 (44%), Gaps = 9/337 (2%)

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A + ++ M+++   P + ++  L+ G  +   +S  FS  + +   G +PDL   ++L +
Sbjct: 75  AFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILAN 134

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEA 390
           CL  +    +AL    G+L    +P+  T+ +L+  +C+  R S   +L   ++      
Sbjct: 135 CLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTP 194

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT------PDNYSFVGLLRGLCGARKID 444
           + V Y  L+   C+ G  N A+KL+  ML+          P   ++  ++ GLC   + D
Sbjct: 195 NAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGRED 254

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
           EA  +++ +       +   ++ ++     AG+  ++  LF   + +    D+V+++V I
Sbjct: 255 EAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLI 314

Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
             L + G+  EA  L   M    + PN  TY  ++  FC   ++   + L   +    +E
Sbjct: 315 DTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLE 374

Query: 565 LDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            D  +   L     K      A+N   EM  +G  P+
Sbjct: 375 PDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPN 411


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 120/492 (24%), Positives = 228/492 (46%), Gaps = 9/492 (1%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFL 186
           + + +  +L    +M  FG  P+ +   IV++ L  + RVD       K+LK    P+  
Sbjct: 82  KTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDAT 141

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           +F   +  LC    +     +   M+ +GF PNV  +  L+N  CK+G  + A +LL  M
Sbjct: 142 TFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSM 201

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
                  +V  ++ LID   + R++  A  ++ +M+  G SPN+VTY SLI G  +   +
Sbjct: 202 EQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEW 261

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
               + ++ +      PD+   N ++D L K G   +A DV D ++   + P+  T+ +L
Sbjct: 262 KHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNAL 321

Query: 367 LSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           +   CL     +  K+   +   +  A+++ YN L++ +CK    ++A+ L+  M  +  
Sbjct: 322 MDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQEL 381

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
           TP+  ++  L+ GLC   ++ +AI+++  +V      +   +  + D L +     KA+ 
Sbjct: 382 TPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMA 441

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           L +      +  D+  YT  + G+   G  E+A  L+S +    + PN +TY +M+   C
Sbjct: 442 LLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLC 501

Query: 544 KERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           K+  +    +L  ++       +  T   +T+   + + +   +  L EM   G   D  
Sbjct: 502 KQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVS 561

Query: 604 WRKL--GLLSDE 613
              L  G+LSD+
Sbjct: 562 TTTLLVGMLSDD 573



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 111/490 (22%), Positives = 213/490 (43%), Gaps = 48/490 (9%)

Query: 68  SFFIWCAKQRDYF---HDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLL 124
           S  +  ++Q D F    DV +   +I+ +  L  R +     + ++ ++G    A TF  
Sbjct: 87  STLLSLSRQMDSFGIPPDVYTLAIVINSLCHL-NRVDFAFSALAKILKLGHQPDATTFTT 145

Query: 125 FLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-- 182
            +R        G  L  FD+M   GF PN      +++ L K+G     I++L+  +   
Sbjct: 146 LIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGN 205

Query: 183 --PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKM------- 233
             PN + F+  + +LCK   V+   ++   M+ KG  PN+  +  L++  CK+       
Sbjct: 206 CQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT 265

Query: 234 ----------------------------GRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF 265
                                       G +AEA+ ++ +MI  G   +V  +  L+DG 
Sbjct: 266 TLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGH 325

Query: 266 RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL 325
                +D+A  +++ MV   C  NV++Y +LI G+ + +    A    + +  +   P+ 
Sbjct: 326 CLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNT 385

Query: 326 VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC----LSGRFSLLPK 381
           V +N LI  L  +G   DA+ ++  ++    +PD  T+ +L   +C    L    +LL K
Sbjct: 386 VTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALL-K 444

Query: 382 LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
            + G   + D+ +Y  +L   C+AG    A  L++ +  KG  P+ +++  ++ GLC   
Sbjct: 445 AIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQG 504

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYT 501
            + EA  ++  +  N  + N   +  I    +      + I+L    +   + +DV + T
Sbjct: 505 LLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTT 564

Query: 502 VAIRGLLEGG 511
           + +  L + G
Sbjct: 565 LLVGMLSDDG 574



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/387 (24%), Positives = 180/387 (46%), Gaps = 3/387 (0%)

Query: 175 KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
           ++L +   P+ + FN  L ++ K    S +  +   M   G  P+V    I++N  C + 
Sbjct: 60  RMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLN 119

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
           R+  A+  L  ++ LG       +T LI G     ++  A +L++KM+  G  PNVVTY 
Sbjct: 120 RVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYG 179

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
           +LI G  +    S A   L  +E     P++V  + LID L K     +A +++  ++  
Sbjct: 180 TLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITK 239

Query: 355 KLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQA 411
            + P+  T+ SL+  +C    +  +  L+  +   ++  D+   N ++   CK G   +A
Sbjct: 240 GISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEA 299

Query: 412 VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
             + + M+ +G  P+  ++  L+ G C   ++D A+ V+  +V  +   N   +  +++ 
Sbjct: 300 HDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLING 359

Query: 472 LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
             +     KA+ LF     ++   + V+Y   I GL   GR ++A  L+ +M      P+
Sbjct: 360 YCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPD 419

Query: 532 AYTYRVMLLSFCKERNIKMVKRLLQDV 558
             TYR +    CK R++     LL+ +
Sbjct: 420 LVTYRTLSDYLCKNRHLDKAMALLKAI 446



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 108/236 (45%), Gaps = 9/236 (3%)

Query: 115 CVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI 174
           CV    ++   +  Y + +     +  F+EM R   TPNT   N ++  L  +GR+   I
Sbjct: 346 CVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAI 405

Query: 175 KVLKET----QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCF 230
            +  E     Q+P+ +++      LCK   +     ++  +    + P+++++  +L+  
Sbjct: 406 SLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGM 465

Query: 231 CKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNV 290
           C+ G + +A  L   + + G   +V  + ++I G  +   L  A  L+ +M +NGCSPN 
Sbjct: 466 CRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPND 525

Query: 291 VTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALD 346
            TY  + +GF+           L+ + + G + D+    +L+  LS     DD LD
Sbjct: 526 CTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLS-----DDGLD 576



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/268 (23%), Positives = 119/268 (44%), Gaps = 14/268 (5%)

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
           M S+   FL    +  H+  L F+           + D+AL  ++ +L  +  P +  F 
Sbjct: 26  MLSLPPPFLSSSHNTFHSKPLHFN-----------TLDEALSTFNRMLHKQPPPSTVDFN 74

Query: 365 SLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
            LL+++  +   S L  L   ++   +  D+     +++  C     + A      +L  
Sbjct: 75  RLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKL 134

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
           G  PD  +F  L+RGLC   KI EA++++  ++      N   +  +++ L + G    A
Sbjct: 135 GHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAA 194

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
           I+L R         +VV ++  I  L +  +  EA+ ++S+M    + PN  TY  ++  
Sbjct: 195 IRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHG 254

Query: 542 FCKERNIKMVKRLLQDVIDARIELDYHT 569
            CK    K V  L+ +++D++I  D  T
Sbjct: 255 LCKLCEWKHVTTLMNEMVDSKIMPDVFT 282



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 88/209 (42%)

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           V +N LL+   K    +  + L   M   G  PD Y+   ++  LC   ++D A +    
Sbjct: 71  VDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAK 130

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           I+      +A   T ++  L   G+  +A+ LF + I E +  +VV+Y   I GL + G 
Sbjct: 131 ILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGN 190

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
           T  A  L   M+     PN   +  ++ S CK+R +     +  ++I   I  +  T   
Sbjct: 191 TSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNS 250

Query: 573 LTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           L   + K          + EM +  ++PD
Sbjct: 251 LIHGLCKLCEWKHVTTLMNEMVDSKIMPD 279


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 134/579 (23%), Positives = 255/579 (44%), Gaps = 44/579 (7%)

Query: 65  IALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLL 124
           +A+ FF W  +Q  Y HDV S++H++ ++ +    F T + +  +L   GC     TF +
Sbjct: 9   LAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGK-VYKDLLHSGCSPNLVTFKI 67

Query: 125 FLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ--- 181
            +R   +       LE    +  F   P+ +  N+++  LFK G  D  +K+ +  +   
Sbjct: 68  LIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSR 127

Query: 182 -LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG--FYPNVRMFEILLNCFCKMGRIAE 238
             P  +++N  +  LCK  ++   ++++  M+RKG    P++  +  L+N F +  RI E
Sbjct: 128 VKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIRE 187

Query: 239 AYQLLGLMITLGTSLSVNAWTVLIDGFRR----------LRRLDMAGYLWEKMVQNG--- 285
           A      M   G +  V    +L+ G  +          L  + +AG + + +  N    
Sbjct: 188 ACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIH 247

Query: 286 -------------------CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
                              CSP++VT+ +L+ GF +A M   A   L+ +  E   PD++
Sbjct: 248 ALCVAGKVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVI 307

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL 386
            + +L++ L ++G    A  + + ++    +PD   + SL+  +C SG      KLV  +
Sbjct: 308 TYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEM 367

Query: 387 EVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
            V      +V+Y++L+S +C+AG  ++A ++   M+     P  +++  +L GL     I
Sbjct: 368 SVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSI 427

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK-YPLDVVSYTV 502
            +A+++   +V      +   +  ++D L +A R  +A  L         +P DV   +V
Sbjct: 428 SKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSV 487

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
            + GL   GR ++A+ L  +M      PN   Y  ++   CK   +     +L  +    
Sbjct: 488 -VFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQG 546

Query: 563 IELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           + LD     +L   +      + A+    EM   G +PD
Sbjct: 547 VALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPD 585



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 119/480 (24%), Positives = 226/480 (47%), Gaps = 7/480 (1%)

Query: 131 RGEMYGMVLEAFDEMG-RFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNF 185
           R     + ++ FD  G + G+  +  + N ++D+L K G      KV K+       PN 
Sbjct: 3   RSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNL 62

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGL 245
           ++F I +   CK        + +  +      P+V +F +L++   K G   +A +L   
Sbjct: 63  VTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFEN 122

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG--CSPNVVTYTSLIKGFMEA 303
           M +      +  +  +I G  +   L+ A  L E+M++ G   +P++VTY +LI  F  A
Sbjct: 123 MESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRA 182

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
                A +F + +++ G  PD++  N+L+  + K G  ++AL++ DG+     VPD  T+
Sbjct: 183 SRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITY 242

Query: 364 CSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
            S++  +C++G+     +++  +    DLV +N LL  FCKAG   +A+++   M  +  
Sbjct: 243 NSIIHALCVAGKVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENI 302

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
            PD  ++  L+ GLC   ++  A  + + IV      +   +T++VD L ++G   +A +
Sbjct: 303 LPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHK 362

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           L +   V      VV Y+  + G    G   +A  + ++M  I + P  +TY ++L    
Sbjct: 363 LVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLI 422

Query: 544 KERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           K+ +I     L+ D++      D  T   L   + K +    A +   EM + G  P+++
Sbjct: 423 KDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDV 482



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/466 (23%), Positives = 215/466 (46%), Gaps = 13/466 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQ--TFLLFLRIYWRGEMYGMVL 139
           ++ +++ +IS + + +G  E  R ++ E+ R G        T+   +  ++R        
Sbjct: 131 EIVTYNTVISGLCK-SGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREAC 189

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNL 195
              ++M   G  P+    NI++  + K G V+  +++L   +L    P+ +++N  +  L
Sbjct: 190 AFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHAL 249

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
           C    V    +++  M      P++  F  LL+ FCK G +  A ++L  M        V
Sbjct: 250 CVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDV 306

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
             +T+L++G  R+ ++ +A YL E++V+ G  P+V+ YTSL+ G  ++     A   +  
Sbjct: 307 ITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKE 366

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
           +   G    +V ++ L+    + G+   A ++   ++ + +VP  +T+  +L  +   G 
Sbjct: 367 MSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGS 426

Query: 376 FSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
            S    L+  L       D+V YN L+   CKA    +A  L + M  +G  P++ +   
Sbjct: 427 ISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGS 486

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           ++ GLC   ++D+A ++   +     A N  V+T+++D L ++ R   A  +      + 
Sbjct: 487 VVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQG 546

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
             LD  +Y   I  +  GGR  EA  +Y +M      P+  T + +
Sbjct: 547 VALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKTL 592



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 68/303 (22%), Positives = 119/303 (39%), Gaps = 43/303 (14%)

Query: 47  ILAPHIVHSTLLN--CPSDLIALSFFIWCAKQRD-YFHDVQSFDHMISVVTRLTGRFETV 103
           IL   I ++ L+N  C    + ++F++     R  Y  DV ++  ++  + + +G  E  
Sbjct: 302 ILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCK-SGEIEEA 360

Query: 104 RGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDV 163
             +V E++  GC      +   +  Y R        E   EM      P  F  NIV+  
Sbjct: 361 HKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGG 420

Query: 164 LFKIGRVDLGIKVLKE----TQLPNFLSFNIALCNLCKLNDVSNVKD------------- 206
           L K G +   + ++ +      +P+ +++N  +  LCK N V    D             
Sbjct: 421 LIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPN 480

Query: 207 -------VIGM---------------MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLG 244
                  V G+               M RK   PNV ++  L++  CK  R+ +A  +L 
Sbjct: 481 DVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLD 540

Query: 245 LMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
            M   G +L   A+  LI       R+  A  ++++MV  G  P+  T  +L +  M   
Sbjct: 541 AMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEAAMSNS 600

Query: 305 MFS 307
           +F 
Sbjct: 601 VFE 603


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 120/492 (24%), Positives = 228/492 (46%), Gaps = 9/492 (1%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFL 186
           + + +  +L    +M  FG  P+ +   IV++ L  + RVD       K+LK    P+  
Sbjct: 82  KTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDAT 141

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           +F   +  LC    +     +   M+ +GF PNV  +  L+N  CK+G  + A +LL  M
Sbjct: 142 TFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSM 201

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
                  +V  ++ LID   + R++  A  ++ +M+  G SPN+VTY SLI G  +   +
Sbjct: 202 EQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEW 261

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
               + ++ +      PD+   N ++D L K G   +A DV D ++   + P+  T+ +L
Sbjct: 262 KHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNAL 321

Query: 367 LSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           +   CL     +  K+   +   +  A+++ YN L++ +CK    ++A+ L+  M  +  
Sbjct: 322 MDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQEL 381

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
           TP+  ++  L+ GLC   ++ +AI+++  +V      +   +  + D L +     KA+ 
Sbjct: 382 TPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMA 441

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           L +      +  D+  YT  + G+   G  E+A  L+S +    + PN +TY +M+   C
Sbjct: 442 LLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLC 501

Query: 544 KERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           K+  +    +L  ++       +  T   +T+   + + +   +  L EM   G   D  
Sbjct: 502 KQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVS 561

Query: 604 WRKL--GLLSDE 613
              L  G+LSD+
Sbjct: 562 TTTLLVGMLSDD 573



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 111/490 (22%), Positives = 213/490 (43%), Gaps = 48/490 (9%)

Query: 68  SFFIWCAKQRDYF---HDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLL 124
           S  +  ++Q D F    DV +   +I+ +  L  R +     + ++ ++G    A TF  
Sbjct: 87  STLLSLSRQMDSFGIPPDVYTLAIVINSLCHL-NRVDFAFSALAKILKLGHQPDATTFTT 145

Query: 125 FLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-- 182
            +R        G  L  FD+M   GF PN      +++ L K+G     I++L+  +   
Sbjct: 146 LIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGN 205

Query: 183 --PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKM------- 233
             PN + F+  + +LCK   V+   ++   M+ KG  PN+  +  L++  CK+       
Sbjct: 206 CQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT 265

Query: 234 ----------------------------GRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF 265
                                       G +AEA+ ++ +MI  G   +V  +  L+DG 
Sbjct: 266 TLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGH 325

Query: 266 RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL 325
                +D+A  +++ MV   C  NV++Y +LI G+ + +    A    + +  +   P+ 
Sbjct: 326 CLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNT 385

Query: 326 VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC----LSGRFSLLPK 381
           V +N LI  L  +G   DA+ ++  ++    +PD  T+ +L   +C    L    +LL K
Sbjct: 386 VTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALL-K 444

Query: 382 LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
            + G   + D+ +Y  +L   C+AG    A  L++ +  KG  P+ +++  ++ GLC   
Sbjct: 445 AIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQG 504

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYT 501
            + EA  ++  +  N  + N   +  I    +      + I+L    +   + +DV + T
Sbjct: 505 LLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTT 564

Query: 502 VAIRGLLEGG 511
           + +  L + G
Sbjct: 565 LLVGMLSDDG 574



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/387 (24%), Positives = 180/387 (46%), Gaps = 3/387 (0%)

Query: 175 KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
           ++L +   P+ + FN  L ++ K    S +  +   M   G  P+V    I++N  C + 
Sbjct: 60  RMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLN 119

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
           R+  A+  L  ++ LG       +T LI G     ++  A +L++KM+  G  PNVVTY 
Sbjct: 120 RVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYG 179

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
           +LI G  +    S A   L  +E     P++V  + LID L K     +A +++  ++  
Sbjct: 180 TLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITK 239

Query: 355 KLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQA 411
            + P+  T+ SL+  +C    +  +  L+  +   ++  D+   N ++   CK G   +A
Sbjct: 240 GISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEA 299

Query: 412 VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
             + + M+ +G  P+  ++  L+ G C   ++D A+ V+  +V  +   N   +  +++ 
Sbjct: 300 HDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLING 359

Query: 472 LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
             +     KA+ LF     ++   + V+Y   I GL   GR ++A  L+ +M      P+
Sbjct: 360 YCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPD 419

Query: 532 AYTYRVMLLSFCKERNIKMVKRLLQDV 558
             TYR +    CK R++     LL+ +
Sbjct: 420 LVTYRTLSDYLCKNRHLDKAMALLKAI 446



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/363 (24%), Positives = 165/363 (45%), Gaps = 10/363 (2%)

Query: 138 VLEAFD---EMGRFGFTPNTFARNIVMDVLFKIGR----VDLGIKVLKETQLPNFLSFNI 190
           V EAF+   EM   G +PN    N ++  L K+        L  +++    +P+  + N 
Sbjct: 226 VTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNT 285

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +  LCK   V+   DV+ MM+ +G  PNV  +  L++  C    +  A ++   M+   
Sbjct: 286 VVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKD 345

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
              +V ++  LI+G+ +++ +D A YL+E+M +   +PN VTY +LI G         A 
Sbjct: 346 CVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAI 405

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
           S    + + G  PDLV +  L D L K    D A+ +   +      PD   + ++L  +
Sbjct: 406 SLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGM 465

Query: 371 CLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           C +G       L   L    ++ ++  YN ++   CK G   +A KL++ M   G +P++
Sbjct: 466 CRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPND 525

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
            ++  + RG     +    I + + ++    +V+    T +V  L + G      Q+  +
Sbjct: 526 CTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCK 585

Query: 488 AIV 490
            ++
Sbjct: 586 IVI 588



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 108/236 (45%), Gaps = 9/236 (3%)

Query: 115 CVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI 174
           CV    ++   +  Y + +     +  F+EM R   TPNT   N ++  L  +GR+   I
Sbjct: 346 CVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAI 405

Query: 175 KVLKET----QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCF 230
            +  E     Q+P+ +++      LCK   +     ++  +    + P+++++  +L+  
Sbjct: 406 SLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGM 465

Query: 231 CKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNV 290
           C+ G + +A  L   + + G   +V  + ++I G  +   L  A  L+ +M +NGCSPN 
Sbjct: 466 CRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPND 525

Query: 291 VTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALD 346
            TY  + +GF+           L+ + + G + D+    +L+  LS     DD LD
Sbjct: 526 CTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLS-----DDGLD 576



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/268 (23%), Positives = 119/268 (44%), Gaps = 14/268 (5%)

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
           M S+   FL    +  H+  L F+           + D+AL  ++ +L  +  P +  F 
Sbjct: 26  MLSLPPPFLSSSHNTFHSKPLHFN-----------TLDEALSTFNRMLHKQPPPSTVDFN 74

Query: 365 SLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
            LL+++  +   S L  L   ++   +  D+     +++  C     + A      +L  
Sbjct: 75  RLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKL 134

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
           G  PD  +F  L+RGLC   KI EA++++  ++      N   +  +++ L + G    A
Sbjct: 135 GHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAA 194

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
           I+L R         +VV ++  I  L +  +  EA+ ++S+M    + PN  TY  ++  
Sbjct: 195 IRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHG 254

Query: 542 FCKERNIKMVKRLLQDVIDARIELDYHT 569
            CK    K V  L+ +++D++I  D  T
Sbjct: 255 LCKLCEWKHVTTLMNEMVDSKIMPDVFT 282



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 88/209 (42%)

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           V +N LL+   K    +  + L   M   G  PD Y+   ++  LC   ++D A +    
Sbjct: 71  VDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAK 130

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           I+      +A   T ++  L   G+  +A+ LF + I E +  +VV+Y   I GL + G 
Sbjct: 131 ILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGN 190

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
           T  A  L   M+     PN   +  ++ S CK+R +     +  ++I   I  +  T   
Sbjct: 191 TSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNS 250

Query: 573 LTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           L   + K          + EM +  ++PD
Sbjct: 251 LIHGLCKLCEWKHVTTLMNEMVDSKIMPD 279


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/422 (27%), Positives = 212/422 (50%), Gaps = 8/422 (1%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCK 197
           F EM +   +PN F  NI++      G +D+ ++      K+  LPN +++N  +   CK
Sbjct: 193 FKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCK 252

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
           L  + +  +++  M  KG  PN+  + +++N  C+ GR+ E   +L  M   G SL    
Sbjct: 253 LRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVT 312

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  LI G+ +      A  +  +M+++G SP+V+TYTSLI    +A   + A  FLD + 
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMR 372

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G  P+   +  L+D  S+ G  ++A  V   +++    P   T+ +L++  C++G+  
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMV 432

Query: 378 LLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
               ++  ++ +    D+V Y+ +LS FC++   ++A+++   M+ KG  PD  ++  L+
Sbjct: 433 DAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLI 492

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
           +G C  R+  EA +++  ++      +   +TA+++     G   KAIQL    + +   
Sbjct: 493 QGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVL 552

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
            DVV+Y+V I GL +  RT EA  L  ++ +    P+  TY   L+  C     K V  L
Sbjct: 553 PDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHT-LIENCSNIEFKSVVSL 611

Query: 555 LQ 556
           ++
Sbjct: 612 IK 613



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 140/625 (22%), Positives = 262/625 (41%), Gaps = 49/625 (7%)

Query: 4   RCKRSLFYTAQRTQILKTIISFKSIHQISSPKVCATTHQDFPIILAPHIVHSTLLNCPS- 62
           RCK    +   R ++ KT        Q  +  V A T  D    L    +  T   C S 
Sbjct: 81  RCKCITLHILTRFKLYKTA-------QTLAEDVAAKTLDDEDASLVFRSLQETYDLCNST 133

Query: 63  ----DLIALSFFIWC-----------AKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIV 107
               DL+  S+   C           ++   +   V S++ ++    R          + 
Sbjct: 134 SSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVF 193

Query: 108 GELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKI 167
            E+ +        T+ + +R +       + L  FD M + G  PN    N ++D   K+
Sbjct: 194 KEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKL 253

Query: 168 GRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMF 223
            ++D G ++L+   L    PN +S+N+ +  LC+   +  +  V+  M ++G+  +   +
Sbjct: 254 RKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTY 313

Query: 224 EILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQ 283
             L+  +CK G   +A  +   M+  G S SV  +T LI    +   ++ A    ++M  
Sbjct: 314 NTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRV 373

Query: 284 NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
            G  PN  TYT+L+ GF +    + A+  L  +   G +P +V +N LI+     G   D
Sbjct: 374 RGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVD 433

Query: 344 ALDVYDGLLELKLVPDSYTFCSLLSTVCLS---GRFSLLPKLVCGLEVEADLVVYNALLS 400
           A+ V + + E  L PD  ++ ++LS  C S        + + +    ++ D + Y++L+ 
Sbjct: 434 AIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQ 493

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
            FC+     +A  L++ ML  G  PD +++  L+   C    + +AI ++  +V      
Sbjct: 494 GFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLP 553

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK-YPLDVVSYTVA--------------IR 505
           +   ++ +++ L +  R  +A +L  +   E+  P DV  +T+               I+
Sbjct: 554 DVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIK 613

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
           G    G   EA  ++  M      P+   Y VM+   C+  +I+    L ++++ +   L
Sbjct: 614 GFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLL 673

Query: 566 DYHTSIRLTKFIFKFHSSSSAVNQL 590
              T I L K + K       VN+L
Sbjct: 674 HTVTVIALVKTLHK----EGKVNEL 694



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 94/385 (24%), Positives = 183/385 (47%), Gaps = 4/385 (1%)

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG-FRRLRRLDMAGYLWEK 280
           +F++++  + ++  I +A  ++ L    G    V ++  ++D   R  R +  A  ++++
Sbjct: 136 VFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKE 195

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           M+Q+  SPNV TY  LI+GF  A    +A  F D +E +G  P++V +N LID   K+  
Sbjct: 196 MLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRK 255

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNA 397
            DD  ++   +    L P+  ++  +++ +C  GR   +  ++  +       D V YN 
Sbjct: 256 IDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNT 315

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
           L+  +CK G  +QA+ ++  ML  G +P   ++  L+  +C A  ++ A      + +  
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRG 375

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAY 517
              N   +T +VD   + G  ++A ++ +  I   +   VV+Y   I G    G+  +A 
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAI 435

Query: 518 ILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFI 577
            +   MK   + P+  +Y  +L  FC+  ++    R+ + ++   I+ D  T   L +  
Sbjct: 436 AVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGF 495

Query: 578 FKFHSSSSAVNQLVEMCNLGLIPDE 602
            +   +  A +   EM  +GL PDE
Sbjct: 496 CEQRRTKEACDLFDEMLRVGLPPDE 520



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 59/268 (22%), Positives = 114/268 (42%), Gaps = 19/268 (7%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALC 193
            +   ++M   G TP+  + + V+    +   VD  ++V ++       P+ ++++  + 
Sbjct: 434 AIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQ 493

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
             C+        D+   M+R G  P+   +  L+N +C  G + +A QL   M+  G   
Sbjct: 494 GFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLP 553

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTY---------------TSLIK 298
            V  ++VLI+G  +  R   A  L  K+      P+ VTY                SLIK
Sbjct: 554 DVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIK 613

Query: 299 GFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP 358
           GF    M + A    + +  + H PD   +NV+I    + G    A  +Y  +++   + 
Sbjct: 614 GFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLL 673

Query: 359 DSYTFCSLLSTVCLSGRFSLLPKLVCGL 386
            + T  +L+ T+   G+ + L  ++  +
Sbjct: 674 HTVTVIALVKTLHKEGKVNELNSVIANV 701


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/422 (26%), Positives = 211/422 (50%), Gaps = 8/422 (1%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           F EM     +PN F  NI++      G +D+ + +  + +    LPN +++N  +   CK
Sbjct: 193 FKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCK 252

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
           L  + +   ++  M  KG  PN+  + +++N  C+ GR+ E   +L  M   G SL    
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT 312

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  LI G+ +      A  +  +M+++G +P+V+TYTSLI    +A   + A  FLD + 
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G  P+   +  L+D  S+ G  ++A  V   + +    P   T+ +L++  C++G+  
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432

Query: 378 LLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
               ++  ++   +  D+V Y+ +LS FC++   ++A+++   M++KG  PD  ++  L+
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
           +G C  R+  EA ++Y+ ++      +   +TA+++     G   KA+QL    + +   
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
            DVV+Y+V I GL +  RT EA  L  ++ +    P+  TY   L+  C     K V  L
Sbjct: 553 PDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHT-LIENCSNIEFKSVVSL 611

Query: 555 LQ 556
           ++
Sbjct: 612 IK 613



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 103/412 (25%), Positives = 204/412 (49%), Gaps = 10/412 (2%)

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIAL-CNLCKLNDVSNVKDVIGMMV 212
           ++V+    ++  +D  + ++   Q    +P  LS+N  L   +    ++S  ++V   M+
Sbjct: 138 DLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEML 197

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
                PNV  + IL+  FC  G I  A  L   M T G   +V  +  LIDG+ +LR++D
Sbjct: 198 ESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKID 257

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGF-MEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
               L   M   G  PN+++Y  +I G   E +M  ++F   +M    G++ D V +N L
Sbjct: 258 DGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEM-NRRGYSLDEVTYNTL 316

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA- 390
           I    K G++  AL ++  +L   L P   T+ SL+ ++C +G  +   + +  + V   
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376

Query: 391 --DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
             +   Y  L+  F + G+ N+A ++   M D GF+P   ++  L+ G C   K+++AI 
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIA 436

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           V + +     + +   ++ ++     +    +A+++ R  + +    D ++Y+  I+G  
Sbjct: 437 VLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFC 496

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
           E  RT+EA  LY +M  + +PP+ +TY  ++ ++C E +++   +L  ++++
Sbjct: 497 EQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE 548



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/390 (24%), Positives = 187/390 (47%), Gaps = 4/390 (1%)

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG-FRRLRRLDMAG 275
           Y    +F++++  + ++  I +A  ++ L    G    V ++  ++D   R  R +  A 
Sbjct: 131 YSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAE 190

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
            ++++M+++  SPNV TY  LI+GF  A    +A +  D +E++G  P++V +N LID  
Sbjct: 191 NVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGY 250

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DL 392
            K+   DD   +   +    L P+  ++  +++ +C  GR   +  ++  +       D 
Sbjct: 251 CKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDE 310

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           V YN L+  +CK G  +QA+ ++  ML  G TP   ++  L+  +C A  ++ A+     
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           + +     N   +T +VD   + G  ++A ++ R      +   VV+Y   I G    G+
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
            E+A  +   MK   + P+  +Y  +L  FC+  ++    R+ +++++  I+ D  T   
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490

Query: 573 LTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
           L +   +   +  A +   EM  +GL PDE
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDE 520



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 120/546 (21%), Positives = 215/546 (39%), Gaps = 101/546 (18%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
           ALS  +  A+   +   V S++ ++    R          +  E+          T+ + 
Sbjct: 153 ALSI-VHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNIL 211

Query: 126 LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL--- 182
           +R +       + L  FD+M   G  PN    N ++D   K+ ++D G K+L+   L   
Sbjct: 212 IRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGL 271

Query: 183 -PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF------------------------- 216
            PN +S+N+ +  LC+   +  V  V+  M R+G+                         
Sbjct: 272 EPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALV 331

Query: 217 ----------YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
                      P+V  +  L++  CK G +  A + L  M   G   +   +T L+DGF 
Sbjct: 332 MHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFS 391

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
           +   ++ A  +  +M  NG SP+VVTY +LI G         A + L+ ++ +G +PD+V
Sbjct: 392 QKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVV 451

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL 386
            ++ ++    +    D+AL V   ++E  + PD+ T+ SL+   C   R     K  C L
Sbjct: 452 SYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRR----TKEACDL 507

Query: 387 EVE-------ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD------------- 426
             E        D   Y AL++ +C  G   +A++L+N M++KG  PD             
Sbjct: 508 YEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK 567

Query: 427 ----------------------------------NYSF---VGLLRGLCGARKIDEAINV 449
                                             N  F   V L++G C    + EA  V
Sbjct: 568 QSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQV 627

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
           ++ ++  N   +   +  ++     AG   KA  L++  +   + L  V+    ++ L +
Sbjct: 628 FESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHK 687

Query: 510 GGRTEE 515
            G+  E
Sbjct: 688 EGKVNE 693



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 80/360 (22%), Positives = 139/360 (38%), Gaps = 74/360 (20%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRG-----EMYGMVLEAFD------- 143
           LT    T   ++  + + G + +A  FL  +R+  RG       Y  +++ F        
Sbjct: 341 LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRV--RGLCPNERTYTTLVDGFSQKGYMNE 398

Query: 144 ------EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL---KETQL-PNFLSFNIALC 193
                 EM   GF+P+    N +++     G+++  I VL   KE  L P+ +S++  L 
Sbjct: 399 AYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLS 458

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
             C+  DV     V   MV KG  P+   +  L+  FC+  R  EA  L   M+ +G   
Sbjct: 459 GFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPP 518

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT------------------- 294
               +T LI+ +     L+ A  L  +MV+ G  P+VVTY+                   
Sbjct: 519 DEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLL 578

Query: 295 -------------------------------SLIKGFMEAKMFSIAFSFLDMLESEGHAP 323
                                          SLIKGF    M + A    + +  + H P
Sbjct: 579 LKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKP 638

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV 383
           D   +N++I    + G    A  +Y  +++   +  + T  +L+  +   G+ + L  ++
Sbjct: 639 DGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVI 698


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 128/515 (24%), Positives = 242/515 (46%), Gaps = 16/515 (3%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFD----EMGRFGFTPN 153
           G F+ ++ +VGE+ R G  +       F+  Y R +++    +AFD    ++  FG   N
Sbjct: 104 GAFDLMKVLVGEMRREGHEVGLGLVQSFIGSYARLQLFD---DAFDLVSNQLDMFGVQAN 160

Query: 154 TFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIG 209
           T   N ++ VL +  ++ L      E       P+ ++FN  +  LC+         ++ 
Sbjct: 161 TEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLE 220

Query: 210 MMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLR 269
            M      P+   F  L+  F + G I  A +L   M  +G S +     VLI+G+ +L 
Sbjct: 221 EMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLG 280

Query: 270 RL-DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH 328
           R+ D  GY+ ++ + +G  P+ VT+++ + G  +      A   L ++  EG  PD+  +
Sbjct: 281 RVGDALGYIQQE-IADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTY 339

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV 388
           + +I+CL   G  ++A  + + +++   +PD+ TF +L+  +C   +      L   L V
Sbjct: 340 STVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTV 399

Query: 389 EA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
           +    ++  +N L++  CK G P+ AV+L+  M   G TPD  ++  L+  LC + K+ +
Sbjct: 400 KGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAK 459

Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
           A+++ + + ++    +   +  I+D L +  R  +A ++F +  V     + +++   I 
Sbjct: 460 ALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLID 519

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
           GL    R ++A  L  QM    + PN  TY  +L  +CK+ NI     +LQ +     E+
Sbjct: 520 GLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEV 579

Query: 566 DYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           D  T   L   + K   + +A+  L  M   G+ P
Sbjct: 580 DVVTYATLINGLCKARRTQAALKLLRGMRMKGMKP 614



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 120/547 (21%), Positives = 231/547 (42%), Gaps = 20/547 (3%)

Query: 70  FIWCAKQRDYF---HDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFL 126
           F   + Q D F    + + ++H+++V+   + + + +     E++  G      TF   +
Sbjct: 145 FDLVSNQLDMFGVQANTEVYNHLLTVLAEGS-KIKLLESAYTEMSSQGIEPDVVTFNTVI 203

Query: 127 RIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----L 182
               R       +   +EM      P+      +M+   + G ++  +++          
Sbjct: 204 DALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCS 263

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P  ++ N+ +   CKL  V +    I   +  GF P+   F   +N  C+ G +  A ++
Sbjct: 264 PTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKV 323

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           LGLM+  G    V  ++ +I+       L+ A  +  +MV +GC P+  T+ +LI     
Sbjct: 324 LGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCT 383

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
                 A      L  +G +P++   N+LI+ L K+G    A+ +++ +      PD  T
Sbjct: 384 ENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVT 443

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTML 419
           +  L+  +C SG+ +    L+  +EV       V YN ++   CK     +A ++++ M 
Sbjct: 444 YNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMD 503

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
             G   +  +F  L+ GLC A +ID+A  +   ++      N   + +I+    + G   
Sbjct: 504 VTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNIS 563

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
           KA  + +      + +DVV+Y   I GL +  RT+ A  L   M+   + P    Y  ++
Sbjct: 564 KAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVI 623

Query: 540 LSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK-----FHSSSSAVNQLVEMC 594
            S  +  N +    L +++ +     D  T     K +F+           A + LVEM 
Sbjct: 624 QSLFRGNNGRDALSLFREMTEVGGPPDAFT----YKIVFRGLCRGGGPIKEAFDFLVEMA 679

Query: 595 NLGLIPD 601
           + G IP+
Sbjct: 680 DNGFIPE 686



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 81/393 (20%), Positives = 147/393 (37%), Gaps = 39/393 (9%)

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           G  P+  ++E ++      G       L+G M   G  + +      I  + RL+  D A
Sbjct: 85  GLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSFIGSYARLQLFDDA 144

Query: 275 GYLWEKMVQN-GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
             L    +   G   N   Y  L+    E     +  S    + S+G  PD+V  N +ID
Sbjct: 145 FDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVID 204

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEA 390
            L +      A+ + + +    + PD  TF +L+      G      +L   +  +    
Sbjct: 205 ALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSP 264

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
             V  N L++ +CK G    A+      +  GF PD  +F   + GLC    +D A+ V 
Sbjct: 265 TSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVL 324

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
             ++      + + ++ +++ L   G   +A  +  + +      D  ++   I  L   
Sbjct: 325 GLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTE 384

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
            + EEA  L  ++    + PN YT+ +++ + CK                     D H +
Sbjct: 385 NQLEEALDLARELTVKGLSPNVYTFNILINALCKVG-------------------DPHLA 425

Query: 571 IRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           +RL +                EM + G  PDE+
Sbjct: 426 VRLFE----------------EMKSSGCTPDEV 442


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 119/410 (29%), Positives = 207/410 (50%), Gaps = 14/410 (3%)

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCKLND 200
           M + GF PN    N ++  L   GR+     L  +++K    P+ +++N  L   CK+ +
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
           +     +    V++GF P+V  +  L+N FCK  ++ EA ++L  M++      V  +  
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF-MEAKMFSIAFSFLDMLESE 319
           L++G  +  R+D A  L   +V  G SPNV+TY++LI G   E +  S A      +  +
Sbjct: 121 LVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS-- 377
           G+ P++  +N+LID L K    ++A +++ GL++  L PD+ T+   +  +C +GR    
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 237

Query: 378 -LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
            L+ K +       D+V +NA+++  CK    ++A  L + M  KG +P+  SF  L+ G
Sbjct: 238 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICG 297

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA---GRCHKAIQLFRRAIVEKY 493
            C A K  +A+  ++ ++          +  +VD L +A   GR  +AI LF   I +  
Sbjct: 298 QCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGR 357

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
             DVV+Y+  I GL + G+ ++A  L   M+     PN YTY  ++   C
Sbjct: 358 VPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLC 407



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 108/409 (26%), Positives = 198/409 (48%), Gaps = 14/409 (3%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCK 197
           ++ M + G++P+    N ++    K+G +D  +K+    +K   +P+ +++N  +   CK
Sbjct: 33  YERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCK 92

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            + +   + ++  MV +   P+V  +  L+N  CK GR+ EA  L+   +  G S +V  
Sbjct: 93  ADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARMLI---VDKGFSPNVIT 149

Query: 258 WTVLIDGF-RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
           ++ LI G  R LR +  A  L+  +++ G  P V TY  LI G ++    + AF     L
Sbjct: 150 YSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGL 209

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
              G  PD + + V ID L K G  +DAL +   + E   VPD  +  ++++ +C   R 
Sbjct: 210 VKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRV 269

Query: 377 SLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
                L+ G+E +    + + +N L+   C+AG   +A+  +  ML +G  P   ++  L
Sbjct: 270 DEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNIL 329

Query: 434 LRGLCGAR---KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
           + GLC AR   +I EAI ++  ++      +   ++A++D L +AG+   A +L      
Sbjct: 330 VDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEA 389

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
           +    +V +Y   I GL    + +EA  L+  M      P+  TY  ++
Sbjct: 390 KGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTII 438



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 204/419 (48%), Gaps = 16/419 (3%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR    + +   + + G      T+   L  + +       L+ FD   + GF P+    
Sbjct: 24  GRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVTY 83

Query: 158 NIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N +++   K  ++D   ++L+    E  +P+ +++N  +  LCK   V   + +I   V 
Sbjct: 84  NALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARMLI---VD 140

Query: 214 KGFYPNVRMFEILLNCFCKMGR-IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
           KGF PNV  +  L++  C+  R ++EA +L G ++  G    V  + +LIDG  +  R++
Sbjct: 141 KGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVN 200

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A  L+  +V++G  P+ +TYT  I G  +A     A   L  ++ +G  PD+V HN +I
Sbjct: 201 EAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVI 260

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP---KLVCGLEVE 389
           + L K    D+A  +  G+      P++ +F +L+   C +G++       K +    V+
Sbjct: 261 NGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVK 320

Query: 390 ADLVVYNALLSYFCKA---GFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
             +V YN L+   CKA   G   +A+ L++ M++KG  PD  ++  L+ GL  A K+D+A
Sbjct: 321 PTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDA 380

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL-DVVSYTVAI 504
             +   +       N + + +++  L    +  +A++LF  A+VEK  + D ++Y   I
Sbjct: 381 RRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELF-VAMVEKGCVPDTITYGTII 438



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 112/430 (26%), Positives = 183/430 (42%), Gaps = 39/430 (9%)

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M + GF+PN   +  LL+  C  GR+++A  L   MI  G S  V  +  L+ GF ++  
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           LD A  +++  V+ G  P+VVTY +LI GF +A     A   L  + SE   PD+V +N 
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 331 LIDCLSKMGSYD---------------------------------DALDVYDGLLELKLV 357
           L++ L K G  D                                 +AL ++  +L+    
Sbjct: 121 LVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYE 180

Query: 358 PDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKL 414
           P+  T+  L+  +    R +   +L  GL    +E D + Y   +   CKAG    A+ +
Sbjct: 181 PEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLM 240

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
              M +KG  PD  S   ++ GLC  +++DEA  +  G+     + NA     ++     
Sbjct: 241 LKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCR 300

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG---GRTEEAYILYSQMKHIAVPPN 531
           AG+  KA+  F+  +       VV+Y + + GL +    GR +EA  L+  M      P+
Sbjct: 301 AGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPD 360

Query: 532 AYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLV 591
             TY  ++    K   +   +RLL  +       + +T   L   +        A+   V
Sbjct: 361 VVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFV 420

Query: 592 EMCNLGLIPD 601
            M   G +PD
Sbjct: 421 AMVEKGCVPD 430



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/385 (25%), Positives = 186/385 (48%), Gaps = 11/385 (2%)

Query: 79  YFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMV 138
           Y  DV +++ ++    ++    E ++   G + R G V    T+   +  + + +     
Sbjct: 41  YSPDVVTYNTLLHGFCKVGELDEALKIFDGAVKR-GFVPDVVTYNALINGFCKADKLDEA 99

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-PNFLSFNIALCNLCK 197
                 M      P+    N +++ L K GRVD    ++ +    PN ++++  +  LC+
Sbjct: 100 QRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCR 159

Query: 198 -LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
            L  VS    + G ++++G+ P V  + IL++   K  R+ EA++L   ++  G      
Sbjct: 160 ELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAI 219

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
            +TV IDG  +  R++ A  + + M + GC P+VV++ ++I G  + K    A   L  +
Sbjct: 220 TYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGM 279

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS--- 373
           E++G +P+ +  N LI    + G +  A+  +  +L+  + P   T+  L+  +C +   
Sbjct: 280 EAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQE 339

Query: 374 GR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
           GR     +L   ++    V  D+V Y+AL+    KAG  + A +L   M  KG  P+ Y+
Sbjct: 340 GRIKEAITLFDAMIEKGRV-PDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYT 398

Query: 430 FVGLLRGLCGARKIDEAINVYQGIV 454
           +  L+ GLCG  K+DEA+ ++  +V
Sbjct: 399 YNSLISGLCGLEKVDEALELFVAMV 423



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 144/295 (48%), Gaps = 13/295 (4%)

Query: 88  HMISVVTRLTGRFETVRGIVGELARVGCVIK------AQTFLLFLRIYWRGEMYGMVLEA 141
           ++I+  T ++G    +RG+   L   G V+K        T+ + +    + +      E 
Sbjct: 146 NVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFEL 205

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           F  + + G  P+     + +D L K GRV+  + +LK+      +P+ +S N  +  LCK
Sbjct: 206 FSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCK 265

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              V   + ++  M  KG  PN   F  L+   C+ G+  +A      M+  G   +V  
Sbjct: 266 EKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVT 325

Query: 258 WTVLIDGFRRLR---RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           + +L+DG  + R   R+  A  L++ M++ G  P+VVTY++LI G  +A     A   L 
Sbjct: 326 YNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLG 385

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
            +E++G  P++  +N LI  L  +   D+AL+++  ++E   VPD+ T+ +++S 
Sbjct: 386 AMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTIISA 440


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/457 (24%), Positives = 224/457 (49%), Gaps = 16/457 (3%)

Query: 158 NIVMDVLFKIGRVDLGIKVLK-----ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
           NIV+  L + G     +++ +     +   P  +++N  +  LCK N++    ++   +V
Sbjct: 49  NIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELV 108

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
           ++G +P+V  +  L++  CK G + EA +L G M + G   +V  ++VLI+G  ++ R+D
Sbjct: 109 KRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRID 168

Query: 273 MAGYLWEKMVQNGCS--PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH---APDLVF 327
            A  L ++M +  C   PN++TY S + G  +  M + A   +  L  +G    +PD V 
Sbjct: 169 EARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLR-DGSLRVSPDTVT 227

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL- 386
            + LID L K G  D+A +  D ++    VP+  T+ +L++ +C + +      ++  + 
Sbjct: 228 FSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMV 285

Query: 387 --EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
              V  D++ Y+ L+  FCKA   ++A++L + M  +G TP+  +F  ++ GLC + +  
Sbjct: 286 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSG 345

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
           EA  +   +       +      ++    +AG   +A  LF   + +    DV+++   I
Sbjct: 346 EAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALI 405

Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
            GL + G+ E A  +   M ++ VPPN  TY V++   CK   I+     L++++ +   
Sbjct: 406 DGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCV 465

Query: 565 LDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            +  T   L   + +   +  A+  + ++ + G  PD
Sbjct: 466 PESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPD 502



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 124/486 (25%), Positives = 229/486 (47%), Gaps = 22/486 (4%)

Query: 101 ETVRGIV---GELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           ET R +    GE+AR G      T+   +    +    G  +E F+E+ + G  P+    
Sbjct: 60  ETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTY 119

Query: 158 NIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N ++D L K G ++    L   +     +PN +++++ +  LCK+  +   +++I  M R
Sbjct: 120 NTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTR 179

Query: 214 KG--FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI--TLGTSLSVNAWTVLIDGFRRLR 269
           K     PN+  +   L+  CK    AEA +L+  +   +L  S     ++ LIDG  +  
Sbjct: 180 KSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCG 239

Query: 270 RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHN 329
           + D A    + M+  G  PNVVTY +L+ G  +A     A + ++ +  +G  PD++ ++
Sbjct: 240 QTDEA--CNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYS 297

Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCG 385
           VL+D   K    D+AL++  G+      P+  TF S++  +C S R    F +  ++   
Sbjct: 298 VLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNR 357

Query: 386 LEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
           + V  D V +N L++  CKAG   QA  L+  M+ K   PD  +F  L+ GLC A +++ 
Sbjct: 358 MLV-PDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEA 416

Query: 446 AINVYQGIVMNNPAVNAHV--HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           A ++    +M N  V  +V  +  +V  L ++GR  +  +     +      + ++Y   
Sbjct: 417 ARDILD--LMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSL 474

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           +  L    RT++A  L S++K     P+  TY +++    K    +    +L++++    
Sbjct: 475 VYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGH 534

Query: 564 ELDYHT 569
           + D  T
Sbjct: 535 QPDSFT 540



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 123/527 (23%), Positives = 233/527 (44%), Gaps = 53/527 (10%)

Query: 48  LAPHIV-HSTLLN--CPSDLIALSFFIWCA-KQRDYFHDVQSFDHMISVVTRLTGRFETV 103
           +AP IV ++T++N  C S+ +     ++    +R +  DV +++ +I  + +  G  E  
Sbjct: 77  VAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCK-AGDLEEA 135

Query: 104 RGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFG--FTPNTFARNIVM 161
           R + G ++  GCV    T+ + +    +        E   EM R      PN    N  +
Sbjct: 136 RRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFL 195

Query: 162 DVLFKIGRVDLGIKVLKETQ------LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG 215
           D L K        ++++  +       P+ ++F+  +  LCK        +    M+  G
Sbjct: 196 DGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGG 253

Query: 216 FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAG 275
           + PNV  +  L+N  CK  ++  A+ ++  M+  G +  V  ++VL+D F +  R+D A 
Sbjct: 254 YVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEAL 313

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
            L   M   GC+PNVVT+ S+I G  ++     AF     + +    PD V  N+LI   
Sbjct: 314 ELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGA 373

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL---LPKLVCGLEVEADL 392
            K G+++ A  +++ ++   + PD  TF +L+  +C +G+      +  L+  L V  ++
Sbjct: 374 CKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNV 433

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           V YN L+   CK+G   +  +    M+  G  P++ ++  L+  LC A + D+A+     
Sbjct: 434 VTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQ---- 489

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
                          +V +L   G                +  D V+Y + + GL + G+
Sbjct: 490 ---------------LVSKLKSFG----------------WDPDTVTYNILVDGLWKSGK 518

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           TE+A  +  +M      P+++T+        +  N+     LL+ V+
Sbjct: 519 TEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVL 565



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/196 (21%), Positives = 85/196 (43%), Gaps = 4/196 (2%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           F+EM      P+      ++D L K G+V+    +L         PN +++N+ +  LCK
Sbjct: 386 FEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCK 445

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              +    + +  MV  G  P    +  L+   C+  R  +A QL+  + + G       
Sbjct: 446 SGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVT 505

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           + +L+DG  +  + + A  + E+MV  G  P+  T+ +   G   +   +     L ++ 
Sbjct: 506 YNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVL 565

Query: 318 SEGHAPDLVFHNVLID 333
           ++G  PD    + ++D
Sbjct: 566 AKGMLPDATTCSSILD 581



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 101/251 (40%), Gaps = 48/251 (19%)

Query: 395 YNALLSYFCKAGFPNQAVKLY-NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
           YN +L   C+AG   +A++++   M   G  P   ++  ++ GLC + ++   + +++ +
Sbjct: 48  YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 107

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
           V      +   +  ++D L +AG   +A +L           +VV+Y+V I GL + GR 
Sbjct: 108 VKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRI 167

Query: 514 EEAYILYSQM--KHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSI 571
           +EA  L  +M  K   V PN  TY   L   CK+        L++ + D         S+
Sbjct: 168 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDG--------SL 219

Query: 572 RLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTPVSLFDGFVPCERRA 631
           R++                         PD            T+T  +L DG   C +  
Sbjct: 220 RVS-------------------------PD------------TVTFSTLIDGLCKCGQTD 242

Query: 632 GNANHLLLNGG 642
              N  ++ GG
Sbjct: 243 EACNDDMIAGG 253


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 136/495 (27%), Positives = 243/495 (49%), Gaps = 34/495 (6%)

Query: 158 NIVMDVLFKIGRVDLGIKVLKE----TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           NIV+  L + G V   + +++E    +  P+ +S+N  +  LCK      +K+ +G+++ 
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCK---AKKLKEAVGLLLE 58

Query: 214 ---KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
               G +PN      L++  CK GR+ EA +LL  M   G    V  +  LI GF     
Sbjct: 59  MEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGN 118

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           LD    L+++M+  G S NVVTY+ L+ G      +  A + L+ +   G  PD+V +  
Sbjct: 119 LDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTG 178

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG----RFSLLPKLVCGL 386
           LID L K G    A+D+ + ++E    P + T+  LLS +C  G     F +L +++   
Sbjct: 179 LIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKIL-RMMIEK 237

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG--FTPDNYSFVGLLRGLCGARKID 444
             +AD+V YN L+   C  G  ++A+KL+N+M D      P+ ++F  L+ GLC   ++ 
Sbjct: 238 GKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLT 297

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
           +A+ +++ +V      N   +  ++   ++AG+  +A++L+++ +   +  +  +Y++ I
Sbjct: 298 KAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILI 357

Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
            G  +      A  L+ +M+   + P  + Y  ++ S CKE +++  K L Q++ +A  E
Sbjct: 358 DGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCE 417

Query: 565 LD---YHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM--------WRKLGLLSDE 613
            D   ++T I  T     F        ++VEM   GL PD +          KLG L DE
Sbjct: 418 PDIISFNTMIDGTLKAGDFQFVKELQMKMVEM---GLRPDALTFSTLINRLSKLGEL-DE 473

Query: 614 TMTPVS--LFDGFVP 626
             + +   +  GF P
Sbjct: 474 AKSALERMVASGFTP 488



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 126/485 (25%), Positives = 225/485 (46%), Gaps = 27/485 (5%)

Query: 133 EMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLS----F 188
           E  G++LE    M   G  PN+     +MD L K GR+D  +++L+  +   F +    +
Sbjct: 51  EAVGLLLE----MEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLY 106

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
              +   C   ++   K++   M+ KG   NV  +  L++  C++G+  EA  +L  M  
Sbjct: 107 GTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAE 166

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
            G    V  +T LIDG  +  R   A  L   MV+ G  P+ VTY  L+ G  +  +   
Sbjct: 167 HGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVID 226

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK--LVPDSYTFCSL 366
           AF  L M+  +G   D+V +N L+  L   G  D+AL +++ + + +  L P+ +TF  L
Sbjct: 227 AFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNML 286

Query: 367 LSTVCLSGRFS--------LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           +  +C  GR +        ++ K  CG     +LV YN LL    KAG   +A++L+  +
Sbjct: 287 IGGLCKEGRLTKAVKIHRKMVKKGSCG-----NLVTYNMLLGGCLKAGKIKEAMELWKQV 341

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN--NPAVNAHVHTAIVDRLIEAG 476
           LD GF P+++++  L+ G C  R ++ A  ++  +  +  NPA+    +  ++  L + G
Sbjct: 342 LDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPAL--FDYNTLMASLCKEG 399

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
              +A  LF+         D++S+   I G L+ G  +    L  +M  + + P+A T+ 
Sbjct: 400 SLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFS 459

Query: 537 VMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNL 596
            ++    K   +   K  L+ ++ +    D      L K +     ++  +N L +M   
Sbjct: 460 TLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAK 519

Query: 597 GLIPD 601
           G + D
Sbjct: 520 GTVLD 524



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 98/449 (21%), Positives = 188/449 (41%), Gaps = 50/449 (11%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           K++ +  DV  +  +IS      G  +  + +  E+   G      T+   +    R   
Sbjct: 95  KKKGFDADVVLYGTLISGFCN-NGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQ 153

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR----VDLGIKVLKETQLPNFLSFNI 190
           +       + M   G  P+      ++D L K GR    +DL   ++++ + P+ +++N+
Sbjct: 154 WKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNV 213

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKG----------------------------------- 215
            L  LCK   V +   ++ MM+ KG                                   
Sbjct: 214 LLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNE 273

Query: 216 --FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
               PNV  F +L+   CK GR+ +A ++   M+  G+  ++  + +L+ G  +  ++  
Sbjct: 274 NCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKE 333

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  LW++++  G  PN  TY+ LI GF + +M +IA      + + G  P L  +N L+ 
Sbjct: 334 AMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMA 393

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEA 390
            L K GS + A  ++  +      PD  +F +++     +G F  + +L   +  + +  
Sbjct: 394 SLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRP 453

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           D + ++ L++   K G  ++A      M+  GFTPD   +  LL+GL       E IN+ 
Sbjct: 454 DALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLL 513

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
             +      ++  + + I+  L     CH
Sbjct: 514 HQMAAKGTVLDRKIVSTILTCL-----CH 537



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 50/234 (21%), Positives = 103/234 (44%), Gaps = 4/234 (1%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLN 199
           +M + G   N    N+++    K G++   +++ K+      +PN  +++I +   CK+ 
Sbjct: 305 KMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMR 364

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
            ++  K +   M   G  P +  +  L+   CK G + +A  L   M        + ++ 
Sbjct: 365 MLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFN 424

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
            +IDG  +         L  KMV+ G  P+ +T+++LI    +      A S L+ + + 
Sbjct: 425 TMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVAS 484

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           G  PD + ++ L+  LS  G   + +++   +     V D     ++L+ +C S
Sbjct: 485 GFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHS 538


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 122/495 (24%), Positives = 223/495 (45%), Gaps = 7/495 (1%)

Query: 117 IKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV 176
           + A T  + +  Y +   +        EM +    P+    N+++D  F+ G VD  I +
Sbjct: 155 VNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIAL 214

Query: 177 LKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCK 232
           +         P  ++FN  L  LCK       K+V   M +    P+VR F IL+  FC+
Sbjct: 215 VDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCR 274

Query: 233 MGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVT 292
           +G + EA +    M   G +  V +++ LI  F    ++D A     +M   G  P+ V 
Sbjct: 275 VGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVI 334

Query: 293 YTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
           YT +I GF  A   S A    D +   G  PD+V +N L++ L K     DA ++ + + 
Sbjct: 335 YTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMK 394

Query: 353 ELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPN 409
           E  + PD  TF +L+   C  G F    +L   L    +  D+V YN+L+   C+ G   
Sbjct: 395 ERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLA 454

Query: 410 QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
           +A +L++ M  +   P++ ++  L+   C   +++EA      +V      N   + +I+
Sbjct: 455 KANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSII 514

Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
                +G   K  Q  ++ + +    D++++   I G ++      A+ +++ M+   V 
Sbjct: 515 KGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQ 574

Query: 530 PNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQ 589
           P+A TY +++  F ++ N++   R+ + +  + IE D +T + L        +S  A   
Sbjct: 575 PDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQL 634

Query: 590 LVEMCNLGLIPDEMW 604
             EM + G  PD+ +
Sbjct: 635 HDEMMHRGFAPDDKF 649



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/465 (22%), Positives = 210/465 (45%), Gaps = 10/465 (2%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           ++R  F DV + + +I    R  G  +    +V  +A  G      TF   L+   +   
Sbjct: 184 EKRCVFPDVVTHNVLIDARFR-AGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRR 242

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNI 190
           +    E F  M +    P+  + NI++    ++G V+  +K  KE Q     P+ +SF+ 
Sbjct: 243 FDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSC 302

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +        + +    +  M   G  P+  ++ +++  FC+ G ++EA ++   M+ LG
Sbjct: 303 LIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLG 362

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
               V  +  L++G  +  RL  A  L  +M + G +P++ T+T+LI G+     F  A 
Sbjct: 363 CLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKAL 422

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
              D L  +   PD+V +N LID + + G    A +++D +   ++ P+  T+  L+ + 
Sbjct: 423 QLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSH 482

Query: 371 CLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
           C  G+    F  L ++V    +  +++ YN+++  +C++G   +  +    M+     PD
Sbjct: 483 CEKGQVEEAFGFLDEMVSKGNL-PNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPD 541

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
             +F  L+ G      +  A NV+  +       +A  +  I++   E G   +A ++F+
Sbjct: 542 LITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFK 601

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
           +        D  +Y   I G +  G ++EA+ L+ +M H    P+
Sbjct: 602 KMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPD 646



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 99/394 (25%), Positives = 175/394 (44%), Gaps = 3/394 (0%)

Query: 176 VLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGR 235
           VL      N  + NI + + CK  +      VI  M ++  +P+V    +L++   + G 
Sbjct: 148 VLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGD 207

Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
           +  A  L+  M   G    +  +  ++ G  + RR D A  ++  M Q   +P+V ++  
Sbjct: 208 VDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNI 267

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           LI GF        A  F   ++  G  PD+V  + LI   S  G  D A      +  L 
Sbjct: 268 LIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLG 327

Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAV 412
           LVPD   +  ++   C +G  S   ++   + GL    D+V YN LL+  CK      A 
Sbjct: 328 LVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAE 387

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
           +L N M ++G TPD  +F  L+ G C     ++A+ ++  ++      +   + +++D +
Sbjct: 388 ELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGM 447

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
              G   KA +L+      +   + V+Y++ I    E G+ EEA+    +M      PN 
Sbjct: 448 CRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNI 507

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
            TY  ++  +C+  N+K  ++ LQ ++   I  D
Sbjct: 508 MTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPD 541


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 151/620 (24%), Positives = 265/620 (42%), Gaps = 60/620 (9%)

Query: 40  THQDFPIILAPHI---VHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTR- 95
           +HQ  P+I+ P +   V S+    P   +AL  F W   Q  +      F  ++ ++ + 
Sbjct: 71  SHQFGPVIVDPDLFVRVLSSFRTSPR--MALRLFRWAESQPGFRRSEFVFCAILEILAQN 128

Query: 96  ---LTGRFETVRGIVGELARV------GCV---IKAQTFLLFLRIYWRGEMYGMVLEAFD 143
               +  +   R I   + R+      GCV   +  +   L + +Y +  M    L  FD
Sbjct: 129 NLMRSAYWVMERVINANMHRIVDVLIGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFD 188

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLN 199
           +M +   +P+    N ++ +L     +   ++V +        P  +++N  L + CK  
Sbjct: 189 KMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGG 248

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
            V    D++  M R+G  PN   + +L+N   K G   +A  L+G M+  G  +S   + 
Sbjct: 249 KVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYN 308

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
            LI G+     L  A  L E+MV  G SP V TY S I G  +    S A   L  + + 
Sbjct: 309 PLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLAN 368

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
              PD+V +N LI    ++G+   A  ++D L  + L P   T+ +LL  +C  G   + 
Sbjct: 369 NLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVA 428

Query: 380 PKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF----VG 432
            +L   +  E    D+V Y  L++  CK G  + A + ++ ML +G   D+Y++    VG
Sbjct: 429 QQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVG 488

Query: 433 LLR-------------------------------GLCGARKIDEAINVYQGIVMNNPAVN 461
            L+                               GLC    ++EA  + Q +V +    +
Sbjct: 489 ELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPD 548

Query: 462 AHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYS 521
              +T+I+   +E GR  K  ++F   + +     VV+YTV I G    GR E A+I +S
Sbjct: 549 YVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFS 608

Query: 522 QMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFH 581
           +M+   + PN  TY  ++   CK R +        ++++  I  + ++   L        
Sbjct: 609 EMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMG 668

Query: 582 SSSSAVNQLVEMCNLGLIPD 601
           +   A++   +M + G+ PD
Sbjct: 669 NWQEALSLYKQMLDRGVQPD 688



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 131/498 (26%), Positives = 216/498 (43%), Gaps = 46/498 (9%)

Query: 126 LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ---- 181
           LRI    ++    +E +  MG FG  P     N ++D   K G+V  G+ +L E Q    
Sbjct: 206 LRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGC 265

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
            PN +++N+ +  L K  +    K +IG M++ G   +   +  L+  +   G +AEA  
Sbjct: 266 APNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALS 325

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           L   M+  G S +V  +   I G  +L R+  A      M+ N   P+VV+Y +LI G+ 
Sbjct: 326 LQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYC 385

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
                  AF   D L S    P +V +N L+D L + G  + A  +   ++   + PD  
Sbjct: 386 RLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIV 445

Query: 362 TFCSLLSTVCLSGRFSLLPK-----LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYN 416
           T+  L++  C  G  S+  +     L  GLE+  D   Y   +    K G  ++A  L  
Sbjct: 446 TYTILVNGSCKMGSLSMAQEFFDEMLHEGLEL--DSYAYATRIVGELKLGDTSRAFSLQE 503

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
            ML KGF PD   +  ++ GLC    ++EA  + Q +V +    +   +T+I+   +E G
Sbjct: 504 EMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENG 563

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAV-P------ 529
           R  K  ++F   + +     VV+YTV I G    GR E A+I +S+M+   + P      
Sbjct: 564 RLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYN 623

Query: 530 ----------------------------PNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
                                       PN Y+Y +++   C   N +    L + ++D 
Sbjct: 624 SLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDR 683

Query: 562 RIELDYHTSIRLTKFIFK 579
            ++ D  T   L K + K
Sbjct: 684 GVQPDSCTHSALLKQLGK 701



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/458 (22%), Positives = 204/458 (44%), Gaps = 36/458 (7%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G FE  +G++GE+ + G  + A T+   +  Y+   M    L   +EM   G +P     
Sbjct: 283 GEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATY 342

Query: 158 NIVMDVLFKIGRVDLGIKVLKE----TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N  +  L K+GR+   ++ L +      LP+ +S+N  +   C+L ++     +   +  
Sbjct: 343 NSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRS 402

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
              +P +  +  LL+  C+ G +  A QL   MI  G +  +  +T+L++G  ++  L M
Sbjct: 403 IYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSM 462

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A   +++M+  G   +   Y + I G ++    S AFS  + + ++G  PDL+ +NV++D
Sbjct: 463 AQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVD 522

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLV 393
            L K+G+ ++A ++   ++   ++PD  T+ S++     +GR                  
Sbjct: 523 GLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRL----------------- 565

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
                           +  +++  ML KG TP   ++  L+ G  G  +++ A   +  +
Sbjct: 566 ---------------RKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEM 610

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
                  N   + ++++ L +  R  +A   F   + +    +  SYT+ I      G  
Sbjct: 611 QEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNW 670

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
           +EA  LY QM    V P++ T+  +L    K+  ++ V
Sbjct: 671 QEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAV 708



 Score = 44.3 bits (103), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 48/247 (19%), Positives = 101/247 (40%), Gaps = 20/247 (8%)

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
           E  + + + L+  + K     Q + +++ M+    +PD  +   +LR L     + +A+ 
Sbjct: 161 EVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVE 220

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           VY+ +           +  ++D   + G+  + + L           + V+Y V I GL 
Sbjct: 221 VYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLS 280

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
           + G  E+A  L  +M    +  +AYTY  ++  +         K +L + +  + E+   
Sbjct: 281 KKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFN-------KGMLAEALSLQEEM--- 330

Query: 569 TSIRLTKFIFKFHSSSSAV-NQLV-EMCNLGLIPDEMWRKLGLLSDETMTPVSLFDGFVP 626
                   + K  S + A  N  +  +C LG + D M +   +L++  +  V  ++  + 
Sbjct: 331 --------VLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIY 382

Query: 627 CERRAGN 633
              R GN
Sbjct: 383 GYCRLGN 389


>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 124/502 (24%), Positives = 223/502 (44%), Gaps = 30/502 (5%)

Query: 65  IALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGR---FETVRGIVGELARVG------- 114
           +AL F  W  KQ     +++   HM  +   +  +   +++ + I+  L ++G       
Sbjct: 92  LALKFLKWVIKQPGL--ELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMGIGSKSIF 149

Query: 115 ---------CVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
                    C      F L +R+Y +  M    +E F+ +G  GF P+ +  N+++  + 
Sbjct: 150 GALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMV 209

Query: 166 KIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
           K  R +L   + +E       PN  +FNI +  LC   ++    +++  M   GF P + 
Sbjct: 210 KDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIV 269

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            +  LLN +CK GR   A +L+  MI  G    V  + V ID      R   A  L +KM
Sbjct: 270 TYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKM 329

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
            +   SPN VTY +LI GF++     +A    + +     +P+ V +N LI     +G +
Sbjct: 330 RKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDF 389

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVV----YNA 397
           ++AL + D +    L  +  T+ +LL+ +C   +F L  +L+  + V  D+VV    Y  
Sbjct: 390 EEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVN-DMVVGHIAYTV 448

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
           L+   CK G  ++AV+L   M   G  PD  ++  L+ G C    I  A  +   +  + 
Sbjct: 449 LIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSG 508

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAY 517
             +N  +++ ++    + G   +A++++       +  D  +  V +  L   G+  EA 
Sbjct: 509 LVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAE 568

Query: 518 ILYSQMKHIAVPPNAYTYRVML 539
                M  I + PN+ TY  ++
Sbjct: 569 KFLCHMSRIGLVPNSITYDCII 590



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 102/417 (24%), Positives = 186/417 (44%), Gaps = 8/417 (1%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF----LSFNIALC 193
            L   D M   G   N      +++ L K  + +L  ++L+  ++ +     +++ + + 
Sbjct: 392 ALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLID 451

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
            LCK   +     ++G M + G  P+V  +  L+N FC++G I  A +++  M   G  L
Sbjct: 452 GLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVL 511

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
           +   ++ LI  F +   +  A  ++  M  NG   +  T   L+           A  FL
Sbjct: 512 NKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFL 571

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
             +   G  P+ + ++ +I+    +G   +A   +D +++    P  +T+ SLL  +C  
Sbjct: 572 CHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKG 631

Query: 374 GRFSLLPKLVCGLEV---EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           G      K +  L       D V+YN LL+  CK+G  ++AV L++ M+     PD+Y++
Sbjct: 632 GNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTY 691

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV-HTAIVDRLIEAGRCHKAIQLFRRAI 489
             LL GLC   K   A+ ++   +        HV +T +VD L +AG    A   F   +
Sbjct: 692 SSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMM 751

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
            +    D V++   I      G+  +A   +S M+   V PN  TY ++L  F K++
Sbjct: 752 KKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQ 808



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 96/421 (22%), Positives = 180/421 (42%), Gaps = 9/421 (2%)

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           GF P+V    ++L    K  R    + L   M   G   +V  + +LI+G      L  A
Sbjct: 193 GFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKA 252

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
           G L ++M +NG  P +VTY +L+  + +   +  A   +D +  +G   D+  +NV ID 
Sbjct: 253 GNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDN 312

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEAD 391
           L        A  +   + +  + P+  T+ +L++     G+  +  ++   +   ++  +
Sbjct: 313 LCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPN 372

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
            V YNAL+   C  G   +A++L + M   G   +  ++  LL GLC   K + A  + +
Sbjct: 373 CVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLE 432

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
            + +N+  V    +T ++D L + G   +A+QL      +    DV++Y+  I G    G
Sbjct: 433 RMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVG 492

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSI 571
             + A  +  +M    +  N   Y  ++ +FC+  N+    ++   +       D+ T  
Sbjct: 493 NIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCN 552

Query: 572 RLTKFIFKFHSSSSAVNQLVEMCNLGLIP-----DEMWRKLGLLSDETMTPVSLFDGFVP 626
            L   + +      A   L  M  +GL+P     D +    G + D  +   S FD  + 
Sbjct: 553 VLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGD-PLNAFSFFDDMIK 611

Query: 627 C 627
           C
Sbjct: 612 C 612



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/337 (24%), Positives = 155/337 (45%), Gaps = 3/337 (0%)

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
           +F++L+  + K G I  A +   L+  +G   SV    +++    + +R ++   L+ +M
Sbjct: 165 VFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREM 224

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
              G  PNV T+  LI G         A + L  +E  G  P +V +N L++   K G Y
Sbjct: 225 SDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRY 284

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNAL 398
             A+++ D ++   +  D  T+   +  +C + R +   LL K +    +  + V YN L
Sbjct: 285 KAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTL 344

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           ++ F K G    A +++N M     +P+  ++  L+ G C     +EA+ +   +     
Sbjct: 345 INGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGL 404

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
            +N   +  +++ L +  +   A +L  R  V    +  ++YTV I GL + G  +EA  
Sbjct: 405 RLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQ 464

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
           L   M    V P+  TY  ++  FC+  NIK  K ++
Sbjct: 465 LVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEII 501



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 124/544 (22%), Positives = 218/544 (40%), Gaps = 88/544 (16%)

Query: 98   GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF---DEMGRFGFTPNT 154
            G+       +  ++R+G V  + T+   +  Y  G + G  L AF   D+M + G  P+ 
Sbjct: 562  GKLGEAEKFLCHMSRIGLVPNSITYDCIINGY--GSI-GDPLNAFSFFDDMIKCGQHPSF 618

Query: 155  FARNIVMDVLFKIGRVDLGIKVLKETQ-LPNFLS---FNIALCNLCKLNDVSNVKDVIGM 210
            F    ++  L K G +    K L     +P  +    +N  L   CK  ++     +   
Sbjct: 619  FTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDK 678

Query: 211  MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA-WTVLIDGFRRLR 269
            MV+    P+   +  LL   C+ G+   A  L G  +  GT    +  +T L+DG  +  
Sbjct: 679  MVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAG 738

Query: 270  RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHN 329
                A Y +E+M++ G  P+ V + ++I           A  F   +   G  P+L  +N
Sbjct: 739  HPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYN 798

Query: 330  VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE 389
            +L+   SK  +    L +Y  ++   + PD  TF SL+  +  SG   L  KL+  + +E
Sbjct: 799  ILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIME 858

Query: 390  ---ADLVVYNALLSYFCKAGFPNQAVKLYN------------------------------ 416
               AD   +N L++ + ++G   +A  L N                              
Sbjct: 859  GTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRES 918

Query: 417  -----TMLDKGFTPDNYSFVGLLRGLC------GARKID---EAINVYQGIVMNNPAVNA 462
                  ML+ G  P +  ++ L+ G+C      GA K+    EA+      V  +  V  
Sbjct: 919  TVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRG 978

Query: 463  HVH--------------------------TAIVDRLIEAGRCHKAIQLFRRAIVE--KYP 494
             +H                          T ++ R     +  +A++L  + ++E     
Sbjct: 979  LLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKL--KGVMELCGLK 1036

Query: 495  LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
            LDVV+Y V I G+   G +  A+ LY +M+H  + PN  TY V++ +     N+   ++L
Sbjct: 1037 LDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKL 1096

Query: 555  LQDV 558
            L D+
Sbjct: 1097 LTDL 1100



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 117/584 (20%), Positives = 231/584 (39%), Gaps = 78/584 (13%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G FE    ++  +   G  +   T+   L    + E + +     + M          A 
Sbjct: 387 GDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAY 446

Query: 158 NIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
            +++D L K G +D  ++++    K+   P+ ++++  +   C++ ++ + K++I  M R
Sbjct: 447 TVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYR 506

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G   N  ++  L+  FC+ G + EA ++  +M   G         VL+    R  +L  
Sbjct: 507 SGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGE 566

Query: 274 A------------------------GY-----------LWEKMVQNGCSPNVVTYTSLIK 298
           A                        GY            ++ M++ G  P+  TY SL+K
Sbjct: 567 AEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLK 626

Query: 299 GFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP 358
           G  +      A  FL+ L     A D V +N L+    K G+  +A+ ++D +++  ++P
Sbjct: 627 GLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLP 686

Query: 359 DSYTFCSLLSTVCLSG--------------RFSLLPK------LVCGLEVEA-------- 390
           DSYT+ SLL+ +C  G              R +L P       LV GL            
Sbjct: 687 DSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYF 746

Query: 391 -----------DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
                      D V +NA++    + G   +A   ++TM   G  P+  ++  LL G   
Sbjct: 747 FEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSK 806

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
            + +   +++Y  ++      +     +++  L ++G     ++L  + I+E    D  +
Sbjct: 807 KQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFT 866

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           + + I    E G+  +A+ L + M  + V P+  TY  +     K+   +    +L +++
Sbjct: 867 FNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEML 926

Query: 560 DARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           +  +   +   I L   + +      A     EM  LG    E+
Sbjct: 927 ENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEV 970



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 74/340 (21%), Positives = 133/340 (39%), Gaps = 59/340 (17%)

Query: 105  GIVGELARVGCVIKAQTFLLFLRIYWRG-----EMYGMVLEAFDE-------------MG 146
             I+   +R G ++KA  F   +R  W G       Y ++L  F +             M 
Sbjct: 764  AIIDSCSRRGQMMKANDFFSTMR--WWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMM 821

Query: 147  RFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIAL------CNLC 196
            R G  P+    + ++  L K G  DLG+K+L     E  L +  +FNI +        + 
Sbjct: 822  REGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMR 881

Query: 197  KLNDVSNVKDVIGM-----------------------------MVRKGFYPNVRMFEILL 227
            K  D+ N  + +G+                             M+  G  P    +  L+
Sbjct: 882  KAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLI 941

Query: 228  NCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCS 287
            N  C++G I  A++L   M  LG      A + ++ G     + + A  + + M++    
Sbjct: 942  NGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLL 1001

Query: 288  PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
            P + T+T+L+  F      + A     ++E  G   D+V +NVLI  +   G    A ++
Sbjct: 1002 PTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFEL 1061

Query: 348  YDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE 387
            Y+ +    L P+  T+  L+  +  +       KL+  L+
Sbjct: 1062 YEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQ 1101



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 76/181 (41%), Gaps = 4/181 (2%)

Query: 144  EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCK-LNDVS 202
            EM   G  P       +++ + ++G +    K+  E +   F S  +A   + + L    
Sbjct: 924  EMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCG 983

Query: 203  NVKD---VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
              +D   V+  M+R    P +  F  L++ FC+  +IAEA +L G+M   G  L V A+ 
Sbjct: 984  KTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYN 1043

Query: 260  VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
            VLI G         A  L+E+M      PN+ TY  L+     A         L  L+  
Sbjct: 1044 VLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQER 1103

Query: 320  G 320
            G
Sbjct: 1104 G 1104



 Score = 42.7 bits (99), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 48/213 (22%), Positives = 90/213 (42%), Gaps = 12/213 (5%)

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDK----GFTPDNYSFVGLLRGLCGARKIDEAINVYQ- 451
           ++L + C+ G  ++++  +  ++D        P  +    L+R       ID A+  ++ 
Sbjct: 133 SILRHLCQMGIGSKSI--FGALMDTYPLCNSIPSVFDL--LIRVYLKEGMIDYAVETFEL 188

Query: 452 -GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
            G+V   P+V  +    I+  +++  R      LFR    +    +V ++ + I GL   
Sbjct: 189 VGLVGFKPSV--YTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVE 246

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
           G  ++A  L  QM+     P   TY  +L  +CK+   K    L+  +I   IE D  T 
Sbjct: 247 GNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTY 306

Query: 571 IRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
                 +   H S+ A   L +M    + P+E+
Sbjct: 307 NVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEV 339



 Score = 41.2 bits (95), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 41/211 (19%), Positives = 85/211 (40%), Gaps = 7/211 (3%)

Query: 80   FHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWR-GEMYGMV 138
            F D  +++H+ + + + +  F     ++ E+   G + K   ++  +    R G++ G  
Sbjct: 896  FPDRDTYNHIFNGLNKKSA-FRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQG-A 953

Query: 139  LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCN 194
             +  DEM   GF  +  A + ++  L   G+ +  + VL        LP   +F   +  
Sbjct: 954  FKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHR 1013

Query: 195  LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
             C+   ++    + G+M   G   +V  + +L+   C  G  A A++L   M       +
Sbjct: 1014 FCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPN 1073

Query: 255  VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
            +  + VL+D       L     L   + + G
Sbjct: 1074 ITTYAVLVDAISAANNLIQGEKLLTDLQERG 1104


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 117/450 (26%), Positives = 218/450 (48%), Gaps = 10/450 (2%)

Query: 133 EMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSF 188
           + + +VL+   +M   G   N +  NI+++   +  +         KV+K    P+  +F
Sbjct: 79  KQFNLVLDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTF 138

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           N  +  LC  + VS    ++  MV  G  PNV  +  ++N  CK G  + A  LL  M  
Sbjct: 139 NTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDE 198

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
                 V  ++ +ID   R   +D A  L+++M   G   ++VTY SL+ G  +A  ++ 
Sbjct: 199 RNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWND 258

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
               L  + S    P+++  NVLID   K G   +A ++Y  ++   + P++ T+ SL+ 
Sbjct: 259 GVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMD 318

Query: 369 TVCLSGRFSL---LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
             C+  R S    +  L+       D+V + +L+  +CK    ++ +KL+  +  +G   
Sbjct: 319 GYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVA 378

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           +  ++  L++G C + K++ A  ++Q +V      +   +  ++D L + G+  KA+++F
Sbjct: 379 NTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIF 438

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
                 K  LD+V YT+ I G+ +GG+ E+A+ L+  +    V PN  TY VM+   CK+
Sbjct: 439 EDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKK 498

Query: 546 RNIKMVKRLLQDVIDARIELD---YHTSIR 572
            ++     LL+ + +   E +   Y+T IR
Sbjct: 499 GSLSEANILLRKMEEDGNEPNDCTYNTLIR 528



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/400 (24%), Positives = 199/400 (49%), Gaps = 3/400 (0%)

Query: 170 VDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
           +DL  ++++   LP+ + F+     +      + V D    M   G   N+    I++NC
Sbjct: 50  IDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMINC 109

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
           FC+  +   AY +LG ++ LG       +  LI+G     ++  A  L  +MV+NGC PN
Sbjct: 110 FCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPN 169

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
           VVTY S++ G  ++   S+A   L  ++      D+  ++ +ID L + G  D A+ ++ 
Sbjct: 170 VVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFK 229

Query: 350 GLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAG 406
            +    +     T+ SL+  +C +G+++    L K +   ++  +++ +N L+  F K G
Sbjct: 230 EMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEG 289

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
              +A +LY  M+ KG +P+  ++  L+ G C   ++ EA N+   +V NN + +    T
Sbjct: 290 KLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFT 349

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
           +++    +  R  + ++LFR+        + V+Y++ ++G  + G+ E A  L+ +M  +
Sbjct: 350 SLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSL 409

Query: 527 AVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
            V P+  TY ++L   C    ++    + +D+  +++ LD
Sbjct: 410 GVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLD 449



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 86/342 (25%), Positives = 162/342 (47%), Gaps = 26/342 (7%)

Query: 102 TVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVM 161
           T   I+  L R GC+  A                   +  F EM   G   +    N ++
Sbjct: 207 TYSTIIDSLCRDGCIDAA-------------------ISLFKEMETKGIKSSLVTYNSLV 247

Query: 162 DVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFY 217
             L K G+ + G+++LK+      +PN ++FN+ +    K   +    ++   M+ KG  
Sbjct: 248 GGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGIS 307

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
           PN   +  L++ +C   R++EA  +L LM+    S  +  +T LI G+ +++R+D    L
Sbjct: 308 PNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKL 367

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
           + K+ + G   N VTY+ L++GF ++    IA      + S G  PD++ + +L+D L  
Sbjct: 368 FRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCD 427

Query: 338 MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVV 394
            G  + AL++++ L + K+  D   +  ++  +C  G+      L C L    V+ +++ 
Sbjct: 428 NGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMT 487

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
           Y  ++S  CK G  ++A  L   M + G  P++ ++  L+R 
Sbjct: 488 YTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRA 529



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/333 (22%), Positives = 157/333 (47%), Gaps = 3/333 (0%)

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           D A  L+++M+++   P++V ++    G    K F++   F   +E  G A ++   N++
Sbjct: 47  DDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIM 106

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EV 388
           I+C  +      A  V   +++L   PD+ TF +L++ +CL  + S    LV  +     
Sbjct: 107 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGC 166

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
           + ++V YN++++  CK+G  + A+ L   M ++    D +++  ++  LC    ID AI+
Sbjct: 167 QPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAIS 226

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           +++ +       +   + ++V  L +AG+ +  +QL +     K   +V+++ V I   +
Sbjct: 227 LFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFV 286

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
           + G+ +EA  LY +M    + PN  TY  ++  +C +  +     +L  ++      D  
Sbjct: 287 KEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIV 346

Query: 569 TSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           T   L K   K       +    ++   GL+ +
Sbjct: 347 TFTSLIKGYCKVKRVDEGMKLFRKISKRGLVAN 379



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 129/300 (43%), Gaps = 16/300 (5%)

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNAL 398
           DDA+D++  ++  + +P    F    S V  + +F+L+      +E+     ++   N +
Sbjct: 47  DDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIM 106

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           ++ FC+      A  +   ++  G+ PD  +F  L+ GLC   K+ EA+ +   +V N  
Sbjct: 107 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGC 166

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
             N   + +IV+ + ++G    A+ L R+        DV +Y+  I  L   G  + A  
Sbjct: 167 QPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAIS 226

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
           L+ +M+   +  +  TY  ++   CK        +LL+D+   +I  +  T   L     
Sbjct: 227 LFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFV 286

Query: 579 KFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTPVSLFDGFVPCERRAGNANHLL 638
           K      A     EM   G+ P+            T+T  SL DG+   + R   AN++L
Sbjct: 287 KEGKLQEANELYKEMITKGISPN------------TITYNSLMDGYCM-QNRLSEANNML 333



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/245 (20%), Positives = 112/245 (45%), Gaps = 4/245 (1%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           +  R      ++  + R  C     TF   ++ Y + +     ++ F ++ + G   NT 
Sbjct: 322 MQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTV 381

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
             +I++    + G++++  ++ +E      LP+ +++ I L  LC    +    ++   +
Sbjct: 382 TYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 441

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
            +     ++ M+ I++   CK G++ +A+ L   +   G   +V  +TV+I G  +   L
Sbjct: 442 QKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 501

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
             A  L  KM ++G  PN  TY +LI+  +     + +   ++ ++S G + D     ++
Sbjct: 502 SEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMV 561

Query: 332 IDCLS 336
           ID LS
Sbjct: 562 IDMLS 566


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 138/578 (23%), Positives = 244/578 (42%), Gaps = 41/578 (7%)

Query: 48  LAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIV 107
           L    + S   NCP                ++ H +QSF  MI ++ R + R    + ++
Sbjct: 217 LGQRFIDSITSNCP----------------NFKHSLQSFSAMIHILVR-SRRLPDAQAVI 259

Query: 108 GELARVGCVIKAQ-----------------TFLLFLRIYWRGEMYGMVLEAFDEMGRFGF 150
             + R   V + +                  F L +R Y +        EAF  +   G 
Sbjct: 260 LRMVRKSGVSRVEIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGL 319

Query: 151 TPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP----NFLSFNIALCNLCKLNDVSNVKD 206
             +  A N ++  L K+G VDL  ++ +E        N  + NI +  LCK   + N K 
Sbjct: 320 CVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKS 379

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
            +  M  KG +P+V  +  L+N +C+ G + EA++L+  M   G    V  +  +I+G  
Sbjct: 380 FLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLC 439

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
           +  +   A  + ++M++ G SP+  TY  L+           A    D + S+G  PDLV
Sbjct: 440 KTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLV 499

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL 386
             + LI  LSK G  D AL  +  +    L PD+  +  L+   C +G  S   K+   +
Sbjct: 500 SFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEM 559

Query: 387 EVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
             +    D+V YN +L+  CK    ++A +L+  M ++G  PD Y+F  L+ G      +
Sbjct: 560 LEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNM 619

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           ++A+ +++ ++  N   +   +  ++D   +     K  +L+   I  +   + +SY + 
Sbjct: 620 NKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGIL 679

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           I G    G   EA+ L+ +M          T   ++  +C+  N       L +++   I
Sbjct: 680 INGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGI 739

Query: 564 ELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
             D  T   L     K  +   A   + +M N GL+PD
Sbjct: 740 VPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPD 777



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 113/525 (21%), Positives = 219/525 (41%), Gaps = 37/525 (7%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           +V + + MI+ + +   + E  +  + ++   G      T+   +  Y R  +     E 
Sbjct: 357 NVYTLNIMINALCK-NQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFEL 415

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET----QLPNFLSFNIALCNLCK 197
            D M   G  P  F  N +++ L K G+      VL E       P+  ++NI L   C+
Sbjct: 416 MDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCR 475

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            +++ + + +   M  +G  P++  F  L+    K G + +A +    M   G +     
Sbjct: 476 NDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVI 535

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T+LI GF R   +  A  + ++M++ GC  +VVTY +++ G  + KM S A      + 
Sbjct: 536 YTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMT 595

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G  PD      LI+   K G+ + A+ +++ +++  L PD                  
Sbjct: 596 ERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPD------------------ 637

Query: 378 LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
                         +V YN L+  FCK     +  +L+N M+ +   P++ S+  L+ G 
Sbjct: 638 --------------VVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGY 683

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
           C    + EA  ++  +V             IV     AG   KA +     +++    D 
Sbjct: 684 CNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDG 743

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
           ++Y   I G ++    + A+ L ++M++  + P+  TY V+L  F ++  ++  + ++  
Sbjct: 744 ITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLK 803

Query: 558 VIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
           +I+  +  D  T   L       ++   A     EM   G +PD+
Sbjct: 804 MIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDD 848



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/217 (21%), Positives = 92/217 (42%), Gaps = 18/217 (8%)

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID---------EA 446
           N+LL    K G+ + A ++Y  ++  G   + Y+   ++  LC  +KI+         E 
Sbjct: 327 NSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEE 386

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
             V+  +V  N  +NA+    +++         +A +L      +     V +Y   I G
Sbjct: 387 KGVFPDVVTYNTLINAYCRQGLLE---------EAFELMDSMSGKGLKPCVFTYNAIING 437

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           L + G+   A  +  +M  I + P+  TY ++L+  C+  N+   +R+  ++    +  D
Sbjct: 438 LCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPD 497

Query: 567 YHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
             +   L   + K      A+    +M N GL PD +
Sbjct: 498 LVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNV 534


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 129/547 (23%), Positives = 235/547 (42%), Gaps = 53/547 (9%)

Query: 74  AKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGE 133
           AK   +   V S++ ++  V R     +   GI  E+   G      T+ + +R +    
Sbjct: 158 AKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAG 217

Query: 134 MYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFN 189
              M L  F EM R G  PN    N ++D   K+ ++    K+L+   L    PN +S+N
Sbjct: 218 NLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYN 277

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
           + +  LC+   +    +++  M ++ + P+   F  L+N +C +G   +A  L   M+  
Sbjct: 278 VVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKN 337

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           G S +V  +T LI+   +   L+ A    ++M   G  PN  TYT+LI GF +      A
Sbjct: 338 GLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQA 397

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
           +  +  +   G  P ++ +N LI+    +G  +DA  +   ++E   +P           
Sbjct: 398 YQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIP----------- 446

Query: 370 VCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
                                D+V Y+ ++S FC+     +A +L   M+ KG +PD  +
Sbjct: 447 ---------------------DVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVAT 485

Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
           +  L++GLC  R++ E  +++Q ++      +   +T++++     G   KA++L    I
Sbjct: 486 YSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMI 545

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
            + +  D+V+Y V I G  +  RT+EA  L  ++ +    PN  TY   L+  C     K
Sbjct: 546 QKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNT-LIDNCNNLEFK 604

Query: 550 MVKRLLQD------------VIDARIELDYHTSIRLTKFIFKFHSS----SSAVNQLVEM 593
               L++             V+++ ++  Y  +  +   I   HS       A N   EM
Sbjct: 605 SALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEM 664

Query: 594 CNLGLIP 600
            + G  P
Sbjct: 665 LHSGFAP 671



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 120/520 (23%), Positives = 227/520 (43%), Gaps = 59/520 (11%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
            G  E      GE+ R GC+    T+   +  Y +    G   +    M   G  PN  +
Sbjct: 216 AGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLIS 275

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIAL---CN--------------- 194
            N+V++ L + G++    ++L+E      +P+ ++FN  +   CN               
Sbjct: 276 YNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMV 335

Query: 195 -----------------LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIA 237
                            +CK  +++   + +  M  +G +PN R +  L++ F + G + 
Sbjct: 336 KNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLK 395

Query: 238 EAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLI 297
           +AYQ++  M+  G + ++  +  LI+G   L R++ A  L ++M++ G  P+VV+Y+++I
Sbjct: 396 QAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTII 455

Query: 298 KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
            GF   +    AF     + ++G +PD+  ++ LI  L K     +  D++  +L L L 
Sbjct: 456 SGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLP 515

Query: 358 PDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKL 414
           PD  T+ SL++  C+ G      +L   +       D+V YN L++ F K     +A +L
Sbjct: 516 PDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRL 575

Query: 415 ---------------YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
                          YNT++D     +  S + L++G C    ++EA  V + ++     
Sbjct: 576 LLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYK 635

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY-PLDVVSYTVAIRGLLEGGRTEEAYI 518
           +N  V+  I+    + G   KA  L++  +   + P  V    +A     EG   E   +
Sbjct: 636 LNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQL 695

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           L   +K   +   A   +V++    KE N+  V  +L+D+
Sbjct: 696 LDYTLKSCRITEAALA-KVLIGINSKEGNMDAVFNVLKDM 734



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 113/485 (23%), Positives = 215/485 (44%), Gaps = 18/485 (3%)

Query: 137 MVLEAFDEMGR--FGFTPNTF----ARNIVMDVLFK-IGRVDLGIKVLKETQL------- 182
           +V+   DE G   F    N++    + + V D++ K   RV+L  K L    L       
Sbjct: 105 VVVNTVDETGEDLFQCLKNSYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFM 164

Query: 183 PNFLSFNIALCNLCKLNDVSNVKD-VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
           P  LS+N  L  + +      + + +   MV  G  PNV  + IL+  FC  G +     
Sbjct: 165 PGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLX 224

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
             G M   G   +V  +  +ID + +LR++  A  L   M   G +PN+++Y  +I G  
Sbjct: 225 FFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLC 284

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
                      L+ +    + PD V  N LI+    +G++  AL ++  +++  L P+  
Sbjct: 285 REGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVV 344

Query: 362 TFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           T+ +L++++C +G  +   + +  +    +  +   Y  L+  F + GF  QA ++   M
Sbjct: 345 TYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEM 404

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
           ++ GFTP   ++  L+ G C   ++++A  + Q ++      +   ++ I+         
Sbjct: 405 VENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQEL 464

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            KA QL    + +    DV +Y+  I+GL +  R  E   L+ +M  + +PP+  TY  +
Sbjct: 465 EKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSL 524

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGL 598
           + ++C E ++    RL  ++I      D  T   L     K   +  A   L+++     
Sbjct: 525 INAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEES 584

Query: 599 IPDEM 603
           +P+E+
Sbjct: 585 VPNEI 589


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 151/620 (24%), Positives = 265/620 (42%), Gaps = 60/620 (9%)

Query: 40  THQDFPIILAPHI---VHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTR- 95
           +HQ  P+I+ P +   V S+    P   +AL  F W   Q  +      F  ++ ++ + 
Sbjct: 71  SHQFGPVIVDPDLFVRVLSSFRTSPR--MALRLFRWAESQPGFRRSEFVFCAILEILAQN 128

Query: 96  ---LTGRFETVRGIVGELARV------GCV---IKAQTFLLFLRIYWRGEMYGMVLEAFD 143
               +  +   R I   + R+      GCV   +  +   L + +Y +  M    L  FD
Sbjct: 129 NLMRSAYWVMERVINANMHRIVDVLIGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFD 188

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLN 199
           +M +   +P+    N ++ +L     +   ++V +        P  +++N  L + CK  
Sbjct: 189 KMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGG 248

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
            V    D++  M R+G  PN   + +L+N   K G   +A  L+G M+  G  +S   + 
Sbjct: 249 KVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYN 308

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
            LI G+     L  A  L E+MV  G SP V TY S I G  +    S A   L  + + 
Sbjct: 309 PLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLAN 368

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
              PD+V +N LI    ++G+   A  ++D L  + L P   T+ +LL  +C  G   + 
Sbjct: 369 NLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVA 428

Query: 380 PKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF----VG 432
            +L   +  E    D+V Y  L++  CK G  + A + ++ ML +G   D+Y++    VG
Sbjct: 429 QQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVG 488

Query: 433 LLR-------------------------------GLCGARKIDEAINVYQGIVMNNPAVN 461
            L+                               GLC    ++EA  + Q +V +    +
Sbjct: 489 ELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPD 548

Query: 462 AHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYS 521
              +T+I+   +E GR  K  ++F   + +     VV+YTV I G    GR E A+I +S
Sbjct: 549 YVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFS 608

Query: 522 QMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFH 581
           +M+   + PN  TY  ++   CK R +        ++++  I  + ++   L        
Sbjct: 609 EMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMG 668

Query: 582 SSSSAVNQLVEMCNLGLIPD 601
           +   A++   +M + G+ PD
Sbjct: 669 NWQEALSLYKQMLDRGVQPD 688



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 131/498 (26%), Positives = 216/498 (43%), Gaps = 46/498 (9%)

Query: 126 LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ---- 181
           LRI    ++    +E +  MG FG  P     N ++D   K G+V  G+ +L E Q    
Sbjct: 206 LRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGC 265

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
            PN +++N+ +  L K  +    K +IG M++ G   +   +  L+  +   G +AEA  
Sbjct: 266 APNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALS 325

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           L   M+  G S +V  +   I G  +L R+  A      M+ N   P+VV+Y +LI G+ 
Sbjct: 326 LQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYC 385

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
                  AF   D L S    P +V +N L+D L + G  + A  +   ++   + PD  
Sbjct: 386 RLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIV 445

Query: 362 TFCSLLSTVCLSGRFSLLPK-----LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYN 416
           T+  L++  C  G  S+  +     L  GLE+  D   Y   +    K G  ++A  L  
Sbjct: 446 TYTILVNGSCKMGSLSMAQEFFDEMLHEGLEL--DSYAYATRIVGELKLGDTSRAFSLQE 503

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
            ML KGF PD   +  ++ GLC    ++EA  + Q +V +    +   +T+I+   +E G
Sbjct: 504 EMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENG 563

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAV-P------ 529
           R  K  ++F   + +     VV+YTV I G    GR E A+I +S+M+   + P      
Sbjct: 564 RLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYN 623

Query: 530 ----------------------------PNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
                                       PN Y+Y +++   C   N +    L + ++D 
Sbjct: 624 SLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDR 683

Query: 562 RIELDYHTSIRLTKFIFK 579
            ++ D  T   L K + K
Sbjct: 684 GVQPDSCTHSALLKQLGK 701



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/469 (22%), Positives = 211/469 (44%), Gaps = 37/469 (7%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G FE  +G++GE+ + G  + A T+   +  Y+   M    L   +EM   G +P     
Sbjct: 283 GEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATY 342

Query: 158 NIVMDVLFKIGRVDLGIKVLKE----TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N  +  L K+GR+   ++ L +      LP+ +S+N  +   C+L ++     +   +  
Sbjct: 343 NSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRS 402

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
              +P +  +  LL+  C+ G +  A QL   MI  G +  +  +T+L++G  ++  L M
Sbjct: 403 IYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSM 462

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A   +++M+  G   +   Y + I G ++    S AFS  + + ++G  PDL+ +NV++D
Sbjct: 463 AQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVD 522

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLV 393
            L K+G+ ++A ++   ++   ++PD  T+ S++     +GR                  
Sbjct: 523 GLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRL----------------- 565

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
                           +  +++  ML KG TP   ++  L+ G  G  +++ A   +  +
Sbjct: 566 ---------------RKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEM 610

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
                  N   + ++++ L +  R  +A   F   + +    +  SYT+ I      G  
Sbjct: 611 QEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNW 670

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
           +EA  LY QM    V P++ T+  +L    K+  ++ V R L+ ++D+ 
Sbjct: 671 QEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAV-RQLESLLDSE 718



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 47/247 (19%), Positives = 100/247 (40%), Gaps = 20/247 (8%)

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
           E  + + + L+  + K     Q + +++ M+    +PD  +   +LR L     + +A+ 
Sbjct: 161 EVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVE 220

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           VY+ +           +  ++D   + G+  + + L           + V+Y V I GL 
Sbjct: 221 VYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLS 280

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
           + G  E+A  L  +M    +  +AYTY  ++  +         K +L + +  + E+   
Sbjct: 281 KKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFN-------KGMLAEALSLQEEM--- 330

Query: 569 TSIRLTKFIFKFHSSSSAVNQ--LVEMCNLGLIPDEMWRKLGLLSDETMTPVSLFDGFVP 626
                   + K  S + A     +  +C LG + D M +   +L++  +  V  ++  + 
Sbjct: 331 --------VLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIY 382

Query: 627 CERRAGN 633
              R GN
Sbjct: 383 GYCRLGN 389


>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
          Length = 650

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 127/526 (24%), Positives = 236/526 (44%), Gaps = 8/526 (1%)

Query: 83  VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF 142
           V  F+ +  ++ R T +++ V  +  ++   G      T  + +  + R    G    A 
Sbjct: 90  VIDFNRLFGLLAR-TKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAM 148

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCKL 198
            ++ + G+ PNT   N +++ L   GRV   ++++        +P+ ++ N  +  LC  
Sbjct: 149 GKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLK 208

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
           + VS   D+I  M+  G  PN   +  +LN  CK G  A A  LL  M        V  +
Sbjct: 209 DRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTY 268

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
           T++ID   +  RLD A   + +M   G   NV TY SLI  F     +      L  + +
Sbjct: 269 TIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMIT 328

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF-- 376
               P++V  + LID L K G   +A D+Y+ ++   + P++ T+ SL+  +C   R   
Sbjct: 329 RKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDE 388

Query: 377 -SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
            + +  L+     + D+  YN L++ FCKA   +  ++L+  M  +G   D  ++  L++
Sbjct: 389 ANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQ 448

Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
           G C +RK+  A  V+Q +V          +  ++D L + G   +A+ +  +    K  L
Sbjct: 449 GFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMEL 508

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
           D+  Y + I G+    + ++A+ L+  +    V  +  +Y +ML   CK  ++     L 
Sbjct: 509 DIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALF 568

Query: 556 QDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           + + +   E D  T   L +   + +  +++V  + EM   G   D
Sbjct: 569 RKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSD 614



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 102/412 (24%), Positives = 186/412 (45%), Gaps = 10/412 (2%)

Query: 138 VLEAFDEMGRF---GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNI 190
           V EA D + R    G  PN F    +++ + K G     + +L++ +     P+ +++ I
Sbjct: 211 VSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTI 270

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            + NLCK   + +       M  KG   NV  +  L+  FC  GR  +  QLL  MIT  
Sbjct: 271 IIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRK 330

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
            + +V  ++ LID   +  +L  A  L+ +M+  G  PN +TY SLI G    K    A 
Sbjct: 331 ITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEAN 390

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
             +D++ S+G  PD+  +N+LI+   K    DD + ++  +    ++ D+ T+ +L+   
Sbjct: 391 QMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGF 450

Query: 371 CLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           C S +  +  K+   +    V   ++ Y  LL   C  G   +A+ + + M       D 
Sbjct: 451 CQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDI 510

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
             +  ++ G+C A K+D+A +++  +       +   +  ++  L +     +A  LFR+
Sbjct: 511 GIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRK 570

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
              + Y  D  +Y   IR  L G     +  L  +MK      +A T ++++
Sbjct: 571 MKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVM 622



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/429 (22%), Positives = 186/429 (43%), Gaps = 38/429 (8%)

Query: 176 VLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGR 235
           +L+   LP  + FN     L +      V  +   M  KG   ++    I++NCFC+  +
Sbjct: 81  MLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRK 140

Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDG-------FRRLR------------------- 269
           +  A+  +G +  LG   +   +  L++G       F  +                    
Sbjct: 141 LGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNT 200

Query: 270 ---------RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
                    R+  A  L  +M+ NGC PN  TY  ++    ++   + A   L  +E   
Sbjct: 201 IVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRK 260

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
             P +V + ++ID L K G  DDAL  +  +    +  + +T+ SL+ + C  GR+    
Sbjct: 261 IKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGA 320

Query: 381 KLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
           +L+  +   ++  ++V ++AL+    K G   +A  LYN M+ +G  P+  ++  L+ GL
Sbjct: 321 QLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGL 380

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
           C  +++DEA  +   +V      +   +  +++   +A +    ++LFR+  +     D 
Sbjct: 381 CNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADT 440

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
           V+Y+  I+G  +  +   A  ++ +M    V P   TY ++L   C    ++    +L  
Sbjct: 441 VTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQ 500

Query: 558 VIDARIELD 566
           +   ++ELD
Sbjct: 501 MHKCKMELD 509



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 86/367 (23%), Positives = 159/367 (43%), Gaps = 45/367 (12%)

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           D A  L++ M+++   P V+ +  L       K + +  +    +E +G A DL   N++
Sbjct: 72  DDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIM 131

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEAD 391
           I+C  +      A      + +L   P++ TF +LL+ +CL GR                
Sbjct: 132 INCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGR---------------- 175

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
             V+              +AV+L + M+     PD  +   ++ GLC   ++ EA+++  
Sbjct: 176 --VF--------------EAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIA 219

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
            ++ N    N   +  I++R+ ++G    A+ L R+    K    VV+YT+ I  L + G
Sbjct: 220 RMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDG 279

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSI 571
           R ++A   +S+M+   +  N +TY  ++ SFC         +LL+D+I  +I  +  T  
Sbjct: 280 RLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFS 339

Query: 572 RLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTPVSLFDGFVPCERRA 631
            L   + K    + A +   EM   G+ P+            T+T  SL  G    ++R 
Sbjct: 340 ALIDSLVKEGKLTEAKDLYNEMITRGIEPN------------TITYNSLIYGLCN-DKRL 386

Query: 632 GNANHLL 638
             AN ++
Sbjct: 387 DEANQMM 393


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 140/603 (23%), Positives = 265/603 (43%), Gaps = 24/603 (3%)

Query: 16  TQILKTIISFK------SIHQISSPKVCATTHQDFPIILAPHIVHSTLLNCPSDLIALSF 69
           T I++TI   +      S+H I +  V    H     +L  H+  + L +      A+SF
Sbjct: 52  TSIVETIKDVRLDGSSWSVHNIRN--VLGPVHGQ---VLGSHVA-AVLRSLKVTGTAISF 105

Query: 70  FIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIY 129
           F W  +Q  + HDV +++ +++++      +     I  E+ + G      +F + +R +
Sbjct: 106 FRWAGEQAGFQHDVFTYNCLMNLLV-AEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSF 164

Query: 130 WRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFN 189
            R       +  F+ M R    P+     I++D L K G  +   +V  E     F+  +
Sbjct: 165 ARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPD 224

Query: 190 IALCN-----LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLG 244
            AL       L K   V   ++V G M + GF P+   +  +++   K G   EA ++L 
Sbjct: 225 RALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLD 284

Query: 245 LMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
            M+      +   + +L++   +   L+ A  L+  M  +G  PN V YTSLI GF ++ 
Sbjct: 285 NMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSG 344

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
               A S  D +   G+ PD++ H V+ID L K G+++ A   ++ ++     P+  T+ 
Sbjct: 345 RMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYT 404

Query: 365 SLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
           +++  +   GR +   +++ G+       D V Y  LL  FCK G  ++A +L + +   
Sbjct: 405 TIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKC 464

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAI-NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
             +P+   +  L+ GLC    +++ + ++++        ++  +  +I+  L + GR  +
Sbjct: 465 SSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDE 524

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEG--GRTEEAYILYSQMKHIAVPPNAYTYRVM 538
           A ++F+R + E    D  +Y + I GL      R E A+ L   ++ +   P+A TY  +
Sbjct: 525 ACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPL 584

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGL 598
            +  CK   +    ++L++        D      L   +        AV+   EM   G 
Sbjct: 585 CIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGG 644

Query: 599 IPD 601
            PD
Sbjct: 645 APD 647



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 113/431 (26%), Positives = 207/431 (48%), Gaps = 12/431 (2%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNL 195
           E F +M + GF P+  A N ++D L K G     +KVL     +  +P  +++ I + +L
Sbjct: 246 EVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSL 305

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
           CK   +   +++  +M   GF PN  ++  L++ F K GR+ EA  L   M+  G    V
Sbjct: 306 CKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDV 365

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
              TV+IDG  +    + A   +E+M++ GC PNVVTYT++I+G  +    + AF  +  
Sbjct: 366 ITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKG 425

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
           + + G  PD V +  L+D   K+G  D+A  + D L +    P+   + SL++ +C  G 
Sbjct: 426 MIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGS 485

Query: 376 FS-----LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
                  L  +     E   D  +  +++   CK G  ++A +++  M+ +G  PD  ++
Sbjct: 486 VEKTLDDLFEQSKAAAET-LDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTY 544

Query: 431 VGLLRGLCGAR--KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
             L+ GLC +R  +++ A  +   +       +A  +T +   L + G   +A+++   A
Sbjct: 545 NILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEA 604

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
               +  DVV+YT    GL   G+ + A  L+ +M      P+A  Y  ++    K + +
Sbjct: 605 SSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKL 664

Query: 549 KMVKRLLQDVI 559
           +   +   ++I
Sbjct: 665 EDACKFFDEMI 675



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 113/463 (24%), Positives = 204/463 (44%), Gaps = 48/463 (10%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
           FDEM   G+ P+     +++D L K G  +   K  +E       PN +++   +  L K
Sbjct: 353 FDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSK 412

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
           +  V+N   ++  M+  G +P+   +  LL+ FCK+GR+ EA QLL  +    +S ++  
Sbjct: 413 IGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQL 472

Query: 258 WTVLIDG--------------FRRLR----------------------RLDMAGYLWEKM 281
           ++ L++G              F + +                      RLD A  ++++M
Sbjct: 473 YSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRM 532

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSI--AFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
           V  GC P+  TY  LI G   ++   +  AF+ L  LE  G+ PD V +  L   L K+G
Sbjct: 533 VSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIG 592

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF----SLLPKLVCGLEVEADLVVY 395
             D A+ + +         D   + +L + +C  G+     SL  ++V       D   Y
Sbjct: 593 EVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMV-RQGGAPDAAAY 651

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
             +++   K      A K ++ M+ KG  P   ++  L++ LC A  +DEA + ++ ++ 
Sbjct: 652 CCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLA 711

Query: 456 NNPAVNA-HVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
               V +  ++ A++    +A +   A++LF   I        V+      GL+  G+TE
Sbjct: 712 RGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTE 771

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
           +A  L  +M     PP+A T+  +L    K      + +L+Q+
Sbjct: 772 KAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKLVQE 814



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 94/409 (22%), Positives = 179/409 (43%), Gaps = 15/409 (3%)

Query: 90  ISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFG 149
           +S + R+   F  ++G++      GC   + T++  L  + +        +  DE+ +  
Sbjct: 410 LSKIGRVANAFRIMKGMIAH----GCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCS 465

Query: 150 FTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALC-----NLCKLNDVSNV 204
            +PN    + +++ L   G V+  +  L E       + +  LC      LCK   +   
Sbjct: 466 SSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEA 525

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKM--GRIAEAYQLLGLMITLGTSLSVNAWTVLI 262
             +   MV +G  P+   + IL+N  C+    R+  A+ LL  +  +G       +T L 
Sbjct: 526 CRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLC 585

Query: 263 DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
            G  ++  +D A  + E+    G + +VV YT+L  G         A S    +  +G A
Sbjct: 586 IGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGA 645

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSL 378
           PD   +  +I+ L K+   +DA   +D ++     P   T+ +L+  +C +G     F  
Sbjct: 646 PDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHR 705

Query: 379 LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
              ++   E+   +++Y+AL+  FCKA   + A+KL+  M+ +G  P   +   L  GL 
Sbjct: 706 FESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLV 765

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
            + K ++A  + Q +       +A   TAI+D L ++    K ++L + 
Sbjct: 766 RSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKLVQE 814



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/346 (23%), Positives = 152/346 (43%), Gaps = 16/346 (4%)

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
           Q G   +V TY  L+   +  K +S  ++  + +   G AP+    N+LI   ++    D
Sbjct: 112 QAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRAD 171

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSG----RFSLLPKLVCGLEVEADLVVYNAL 398
           DA+  ++ +   +  PD +TF  L+  +C +G     F +  +++    V  D  ++ A+
Sbjct: 172 DAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAM 231

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           +    KA    +A +++  M   GF PD  ++  ++ GL  A    EA+ V   ++    
Sbjct: 232 VRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKAC 291

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
                 +  +V+ L +AG   +A +LFR      +  + V YT  I G  + GR +EA  
Sbjct: 292 VPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACS 351

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
           L+ +M      P+  T+ VM+   CK  N +   +  ++++    + +  T   + + + 
Sbjct: 352 LFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLS 411

Query: 579 KFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTPVSLFDGF 624
           K    ++A   +  M   G  PD            ++T + L DGF
Sbjct: 412 KIGRVANAFRIMKGMIAHGCFPD------------SVTYICLLDGF 445


>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
 gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 647

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 108/432 (25%), Positives = 201/432 (46%), Gaps = 12/432 (2%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFL 186
           R  M G V+  +D M + G  PN F  N+++  L +  RV    K+L E       P+ +
Sbjct: 140 RENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDV 199

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           ++   +  LCKL+ +    +V+  M      P    +  ++   C+  R+ E + ++  M
Sbjct: 200 TYATIVSVLCKLDRLDEATEVLAAMP-----PVAASYNAIVLALCREFRMQEVFSVVSDM 254

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
           +  G   +V  +T ++D F +   L MA  +  +MV  GC+PNVVT+T+L++G  +    
Sbjct: 255 VGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRV 314

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
             A      + +EG AP  V +N+LI  L  +G    A  + + + +    P+  T+ +L
Sbjct: 315 HDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTL 374

Query: 367 LSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           +     +G       +   +     + ++VVY  ++  FCK    NQA  L + ML +  
Sbjct: 375 IDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENC 434

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
            P+  +F  L+R LC  R++  A+ V+  +  +    N   +  ++  L   G C  A+ 
Sbjct: 435 PPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALH 494

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           +          L +V+Y   + GL +   + EA +   +M    + PNA+T+  ++ ++C
Sbjct: 495 MVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYC 554

Query: 544 KERNIKMVKRLL 555
           KE  ++M   +L
Sbjct: 555 KEGEVRMAAWML 566



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 105/457 (22%), Positives = 190/457 (41%), Gaps = 39/457 (8%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET 180
           T+ L +R   +    G   +  DEM R G  P+      ++ VL K+ R+D   +VL   
Sbjct: 165 TYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAM 224

Query: 181 QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAY 240
             P   S+N  +  LC+   +  V  V+  MV +G  PNV  +  +++ FCK G +  A 
Sbjct: 225 P-PVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMAC 283

Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
            +L  M+  G + +V  +T L+ G     R+  A  +W  MV  G +P+ V+Y  LI+G 
Sbjct: 284 AILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGL 343

Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
                   A S L+ +E  G  P++  ++ LID  SK G    A+ +++ +      P+ 
Sbjct: 344 CSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNV 403

Query: 361 YTFCSLLSTVCLSGRFSLLPKLVCGLEVE---ADLVVYNALLSYFCKAGFPNQAVKLYNT 417
             + +++   C    F+    L+  + +E    + V +N L+   C      +A+ +++ 
Sbjct: 404 VVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHE 463

Query: 418 MLDKGFTPDNYSFV----GLLR-------------------------------GLCGARK 442
           M   G  P+  ++     GL R                               GLC  R 
Sbjct: 464 MRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRM 523

Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTV 502
             EA+     +++     NA   +AI+    + G    A  +     V     +++ YT+
Sbjct: 524 SREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTI 583

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
            +  L    +  +A     +M +  + PN  T+ V++
Sbjct: 584 LMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLV 620



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 94/424 (22%), Positives = 178/424 (41%), Gaps = 37/424 (8%)

Query: 178 KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIA 237
           K+   PN  ++N+ +  LC+ N V   + ++  M RKG  P+   +  +++  CK+ R+ 
Sbjct: 156 KDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLD 215

Query: 238 EAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLI 297
           EA ++L  M  +  S     +  ++    R  R+     +   MV  G  PNV+TYT+++
Sbjct: 216 EATEVLAAMPPVAAS-----YNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIV 270

Query: 298 KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
             F +A    +A + L  +   G  P++V    L+  L   G   DALD++  ++     
Sbjct: 271 DAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWA 330

Query: 358 PDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
           P +                                V YN L+   C  G    A  + N+
Sbjct: 331 PST--------------------------------VSYNILIRGLCSVGDLKGASSILNS 358

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           M   G  P+  ++  L+ G   A  +  AI+++  +  +    N  V+T +VD   +   
Sbjct: 359 MEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLM 418

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
            ++A  L  + ++E  P + V++   IR L +  R   A  ++ +M+     PN  TY  
Sbjct: 419 FNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNE 478

Query: 538 MLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLG 597
           ++    +E N      ++ ++    IEL   T   +   + +   S  A+  + +M   G
Sbjct: 479 LIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQG 538

Query: 598 LIPD 601
           + P+
Sbjct: 539 IQPN 542



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 91/400 (22%), Positives = 163/400 (40%), Gaps = 42/400 (10%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           R + V  +V ++   G      T+   +  + +     M       M   G TPN     
Sbjct: 243 RMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFT 302

Query: 159 IVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
            ++  LF  GRV    D+   ++ E   P+ +S+NI +  LC + D+     ++  M + 
Sbjct: 303 ALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQH 362

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           G +PNVR +  L++ F K G +  A  +   M   G   +V  +T ++D F +    + A
Sbjct: 363 GCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQA 422

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             L +KM+   C PN VT+ +LI+   + +    A      +   G  P+   +N LI  
Sbjct: 423 KSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHG 482

Query: 335 LSKMGSYDDALDVYDGL----LELKLV-------------------------------PD 359
           L + G+  DAL +   +    +EL LV                               P+
Sbjct: 483 LFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPN 542

Query: 360 SYTFCSLLSTVCLSGRFSLLPKLVCGLEV---EADLVVYNALLSYFCKAGFPNQAVKLYN 416
           ++TF +++   C  G   +   ++  + V     +++VY  L++  C       A+    
Sbjct: 543 AFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLL 602

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            ML +G  P+  ++  L+RG+       E  +  Q I MN
Sbjct: 603 KMLYEGIYPNTVTWNVLVRGVFRNLGCIEPSDFIQHITMN 642



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 60/278 (21%), Positives = 117/278 (42%), Gaps = 6/278 (2%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G  +    I+  + + GC    +T+   +  + +    G  +  +++M R G  PN    
Sbjct: 347 GDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVY 406

Query: 158 NIVMDV-----LFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
             ++DV     +F   +  L  K+L E   PN ++FN  + +LC    V     V   M 
Sbjct: 407 TNMVDVFCKKLMFNQAK-SLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMR 465

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
           R G  PN R +  L++   + G   +A  ++  M + G  LS+  +  ++ G  + R   
Sbjct: 466 RHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSR 525

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A     KM+  G  PN  T++++I  + +     +A   L  +       +++ + +L+
Sbjct: 526 EAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILM 585

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
             L       DA+     +L   + P++ T+  L+  V
Sbjct: 586 AELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGV 623


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 125/464 (26%), Positives = 223/464 (48%), Gaps = 15/464 (3%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVL-KETQL---PNFLSFNIALCNLCKLNDVSNV 204
           G +PNT   NI+++   ++ RVDLG  VL K  +L   P  ++F   +  L K+   +  
Sbjct: 5   GLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQA 64

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
            ++   MV +G  P+   +  ++N  CK+G  A A  L   M   G  L+V  ++ LI  
Sbjct: 65  VELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHS 124

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
             + RR++ A  ++  M     SP + TYTSLI+G      +  A + L+ + S    P+
Sbjct: 125 LCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPN 184

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS-----TVCLSGR--FS 377
           +V  NVL+D   K G    A  V   + E+ + PD  T+ SL+      T  +  R  F 
Sbjct: 185 VVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFD 244

Query: 378 LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
           ++    C    + D+  Y+ L++ +CKA   ++A +L+N M+ +G TP+N S+  L+ GL
Sbjct: 245 VMITKGC----KPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGL 300

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
           C   ++ EA ++++ +  N    N + +  ++D   + G   KA +LFR         ++
Sbjct: 301 CQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNL 360

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
           V Y + +  + + G  ++A  L+S++  I + PN   Y  ++   CKE  +       ++
Sbjct: 361 VMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRN 420

Query: 558 VIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           + D     D  +   + +   +    S AV+ + EM + G I D
Sbjct: 421 MEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITD 464



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/423 (24%), Positives = 199/423 (47%), Gaps = 3/423 (0%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           PN  + NI +   C+L  V     V+   ++ G  P +  F  L+N   K+G+ A+A +L
Sbjct: 8   PNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVEL 67

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
              M+  G       +T +I+G  ++    +A  L++KM + GC  NVVTY++LI    +
Sbjct: 68  FDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCK 127

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
            +  + A      ++++  +P +  +  LI  L     + +A  + + +  L ++P+  T
Sbjct: 128 YRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVT 187

Query: 363 FCSLLSTVCLSGRF---SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
           F  L+ T C  G+      + K +  + VE D+V YN+L+  +       +A KL++ M+
Sbjct: 188 FNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMI 247

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
            KG  PD +S+  L+ G C A++IDEA  ++  ++      N   +  ++  L + GR  
Sbjct: 248 TKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLR 307

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
           +A  LF+         ++ +Y + + G  + G   +A+ L+  M+   + PN   Y +++
Sbjct: 308 EAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILV 367

Query: 540 LSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLI 599
            + CK  N+K  + L  ++    ++ +      +   + K      A+     M + G  
Sbjct: 368 NAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCP 427

Query: 600 PDE 602
           PDE
Sbjct: 428 PDE 430



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 101/432 (23%), Positives = 178/432 (41%), Gaps = 77/432 (17%)

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP----NFLSFNI 190
           +   +E FD+M   G  P+ +    +++ L KIG   L   + K+ +      N ++++ 
Sbjct: 61  FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRK-----------------------------------G 215
            + +LCK   V+   D+   M  K                                    
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180

Query: 216 FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAG 275
             PNV  F +L++ FCK G++  A  +L  M  +G    V  +  L+ G+     +  A 
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEAR 240

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
            L++ M+  GC P+V +Y+ LI G+ +AK    A    + +  +G  P+ V +N LI  L
Sbjct: 241 KLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGL 300

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADL 392
            ++G   +A D++  +     +P+ YT+  LL   C  G      +L   ++   ++ +L
Sbjct: 301 CQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNL 360

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           V+YN L++  CK+G    A +L++ +   G  P+   +  ++ GLC    +DEA+  +  
Sbjct: 361 VMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAF-- 418

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
                             R +E   C               P D  SY V IRG L+   
Sbjct: 419 ------------------RNMEDDGC---------------PPDEFSYNVIIRGFLQHKD 445

Query: 513 TEEAYILYSQMK 524
              A  L  +M+
Sbjct: 446 ESRAVHLIGEMR 457



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 144/292 (49%), Gaps = 7/292 (2%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE-TQL---PNFLSFNIALCNLCK 197
            +EM      PN    N+++D   K G+V     VLK  T++   P+ +++N  +     
Sbjct: 173 LNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSM 232

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
             +V   + +  +M+ KG  P+V  + IL+N +CK  RI EA QL   MI  G++ +  +
Sbjct: 233 WTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVS 292

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  LI G  +L RL  A  L++ M  NG  PN+ TY  L+ GF +      AF     ++
Sbjct: 293 YNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQ 352

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
           S    P+LV +N+L++ + K G+  DA +++  L  + L P+   + ++++ +C  G   
Sbjct: 353 STYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLD 412

Query: 378 LLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
              +    +E +    D   YN ++  F +    ++AV L   M D+GF  D
Sbjct: 413 EALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITD 464



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 117/254 (46%), Gaps = 32/254 (12%)

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
           +E  G +P+    N+LI+C  ++   D    V    ++L L P   TF +L++ +   G+
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 376 FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
           F+                                QAV+L++ M+ +G  PD+Y++  ++ 
Sbjct: 61  FA--------------------------------QAVELFDDMVARGCQPDDYTYTTIIN 88

Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
           GLC   +   A  +++ +      +N   ++ ++  L +  R ++A+ +F     +    
Sbjct: 89  GLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISP 148

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
            + +YT  I+GL    R +EA  L ++M  + + PN  T+ V++ +FCKE  +   + +L
Sbjct: 149 TIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVL 208

Query: 556 QDVIDARIELDYHT 569
           + + +  +E D  T
Sbjct: 209 KTMTEMGVEPDVVT 222


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 122/464 (26%), Positives = 213/464 (45%), Gaps = 24/464 (5%)

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCN 194
           L  F EM R G  PN    N ++D   K+GR+D    +LK    +   PN +S+N+ +  
Sbjct: 30  LGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIING 89

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           LC+   +    +++  M  KGF P+   +  LLN +CK G   +A  +   M+  G S S
Sbjct: 90  LCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPS 149

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           V  +T LI+   + R L+ A   +++M   G  PN  TYT+LI GF    + + A+  L+
Sbjct: 150 VVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILN 209

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            +   G +P +V +N  I     +   ++AL V   ++E  L PD  ++ +++S  C  G
Sbjct: 210 EMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKG 269

Query: 375 R----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
                F +  ++V    V  D V Y++L+   C+     +A  L   MLD G  PD +++
Sbjct: 270 ELDRAFQMKQEMV-EKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTY 328

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             L+   C    +++A++++  ++      +A  ++ +++ L +  R  +A +L  + I 
Sbjct: 329 TTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIY 388

Query: 491 EKY-PLDVV--------------SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
           E+  P DV               S    I+G    G   EA  ++  M      P    Y
Sbjct: 389 EESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVY 448

Query: 536 RVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK 579
            V++   C+  N+     L +++I +       T I L K +FK
Sbjct: 449 NVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFK 492



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/479 (24%), Positives = 224/479 (46%), Gaps = 24/479 (5%)

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLND 200
           M R   +PN +  NI++     +G +  G+    E +    LPN +++N  +   CK+  
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
           +     ++  M  KG  PN+  + +++N  C+ G + EA+++L  M   G +     +  
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           L++G+ +      A  +  +MV+NG SP+VVTYT+LI    +A+  + A  F D +   G
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
             P+   +  LID  S+ G  ++A  + + + E    P   T+ + +   C+  R     
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 240

Query: 381 KLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
            +V  +    +  D+V Y+ ++S FC+ G  ++A ++   M++KG +PD  ++  L++GL
Sbjct: 241 GVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGL 300

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
           C  R++ EA ++ Q ++      +   +T +++     G  +KA+ L    I + +  D 
Sbjct: 301 CEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDA 360

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
           V+Y+V I GL +  RT EA  L  ++ +    P+  TY   L+  C     K V  L++ 
Sbjct: 361 VTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDT-LIENCSNIEFKSVVALIKG 419

Query: 558 ------------VIDARIELDYHTSIRLTKFIFKFHSSSS----AVNQLVEMCNLGLIP 600
                       V ++ +E ++     +   I   H        A N   EM + G +P
Sbjct: 420 FCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVP 478



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 120/487 (24%), Positives = 214/487 (43%), Gaps = 28/487 (5%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF---DEMGRFGFTPNT 154
           G  +   G  GE+ R GC+    T+   +  Y +    G + EAF     M   G  PN 
Sbjct: 24  GELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCK---MGRIDEAFGLLKSMSSKGMQPNL 80

Query: 155 FARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGM 210
            + N++++ L + G +    ++L+E       P+ +++N  L   CK  +      +   
Sbjct: 81  ISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAE 140

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           MVR G  P+V  +  L+N  CK   +  A +    M   G   +   +T LIDGF R   
Sbjct: 141 MVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGL 200

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           L+ A  +  +M ++G SP+VVTY + I G    +    A   +  +  +G APD+V ++ 
Sbjct: 201 LNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYST 260

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL---LPKLVCGLE 387
           +I    + G  D A  +   ++E  + PD+ T+ SL+  +C   R +    L + +  + 
Sbjct: 261 IISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMG 320

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
           +  D   Y  L++ +C  G  N+A+ L++ M+ KGF PD  ++  L+ GL    +  EA 
Sbjct: 321 LPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAK 380

Query: 448 NV---------------YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
            +               Y  ++ N   +      A++      G  H+A ++F   +   
Sbjct: 381 RLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERN 440

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVK 552
           +      Y V I G   GG   +A+ LY +M H    P+  T   ++ +  KE   + + 
Sbjct: 441 HKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMS 500

Query: 553 RLLQDVI 559
            ++ D +
Sbjct: 501 EVIGDTL 507



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 86/357 (24%), Positives = 160/357 (44%), Gaps = 32/357 (8%)

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           MI    S +V  + +LI GF  +  L      + +M +NGC PNVVTY +LI  + +   
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
              AF  L  + S+G  P+L+ +NV+I+ L + GS  +A ++ + +      PD      
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDE----- 115

Query: 366 LLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
                                      V YN LL+ +CK G  +QA+ ++  M+  G +P
Sbjct: 116 ---------------------------VTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSP 148

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
              ++  L+  +C AR ++ A+  +  + +     N   +T ++D     G  ++A ++ 
Sbjct: 149 SVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRIL 208

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
                  +   VV+Y   I G     R EEA  +  +M    + P+  +Y  ++  FC++
Sbjct: 209 NEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRK 268

Query: 546 RNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
             +    ++ Q++++  +  D  T   L + + +    + A +   EM ++GL PDE
Sbjct: 269 GELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDE 325


>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 107/418 (25%), Positives = 202/418 (48%), Gaps = 7/418 (1%)

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNI 190
           +   L+ F  M      P+      ++ V+ K+ R D+ I + ++ Q+    P   + NI
Sbjct: 63  FNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNI 122

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +  +C+ +        +G M++ GF P++  F  LL+ FC   RI +A  L   ++ +G
Sbjct: 123 VMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMG 182

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
              +V  +T LI    + R L+ A  ++ +M  NG  PNVVTY SL+ G  E   +S A 
Sbjct: 183 FRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAA 242

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
             L  +   G  P+++    LID   K+G   +A ++Y  ++++ + PD +T+ +L++ +
Sbjct: 243 WLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGL 302

Query: 371 CLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           C  GR     ++   +E      + V Y  L+  FCK+       K++  M  KG   + 
Sbjct: 303 CTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANT 362

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
            ++  L++G C   + D A  V+  +       +   +  ++D L   G   KA+ +F+ 
Sbjct: 363 ITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKY 422

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
               +  +++V+YT+ I+G+ + G+ E+A+ L+  +    + PN  TY  M+  FC+ 
Sbjct: 423 MRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRR 480



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/352 (25%), Positives = 168/352 (47%), Gaps = 7/352 (1%)

Query: 107 VGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK 166
           +G++ ++G      TF   L  +         L  FD++   GF PN      ++  L K
Sbjct: 140 LGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCK 199

Query: 167 IGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
              ++  +++  +       PN +++N  +  LC++   S+   ++  M+++G  PNV  
Sbjct: 200 NRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVIT 259

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           F  L++ F K+G+I EA +L  +MI +     V  +T LI+G     RLD A  ++  M 
Sbjct: 260 FTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLME 319

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
            NG  PN VTYT+LI GF ++K           +  +G   + + + VLI     +G  D
Sbjct: 320 SNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPD 379

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSG---RFSLLPKLVCGLEVEADLVVYNALL 399
            A +V++ +   +  PD  T+  LL  +C +G   +  ++ K +   E++ ++V Y  ++
Sbjct: 380 VAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIII 439

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
              CK G    A  L+ ++  KG  P+  ++  ++ G C    I EA  +++
Sbjct: 440 QGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFK 491



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 83/335 (24%), Positives = 159/335 (47%), Gaps = 7/335 (2%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           R E    +  ++  +G      T+   +    +       +E F++MG  G  PN    N
Sbjct: 167 RIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYN 226

Query: 159 IVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
            ++  L +IGR      +L++       PN ++F   +    K+  +   K++  +M++ 
Sbjct: 227 SLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQM 286

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
             YP+V  +  L+N  C  GR+ EA Q+  LM + G   +   +T LI GF + +R++  
Sbjct: 287 SVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDG 346

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             ++ +M Q G   N +TYT LI+G+       +A    + + S    PD+  +NVL+D 
Sbjct: 347 TKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDG 406

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEAD 391
           L   G  + AL ++  + + ++  +  T+  ++  +C  G+      L C L    ++ +
Sbjct: 407 LCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPN 466

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
           ++ Y  ++S FC+ GF ++A  L+  M + GF P+
Sbjct: 467 VITYTTMISGFCRRGFIHEADALFKKMKEDGFLPN 501



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 81/299 (27%), Positives = 147/299 (49%), Gaps = 8/299 (2%)

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
           N   +L +G   L+  + A  L+ +MV +   P++V +T L+    + K F +  S  + 
Sbjct: 49  NYRKILRNGLHNLQ-FNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQ 107

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
           ++  G +P L   N++++C+ +      A      +++L   PD  TF SLL   C   R
Sbjct: 108 MQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNR 167

Query: 376 ----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
                +L  ++V G+    ++V Y  L+   CK    N AV+++N M D G  P+  ++ 
Sbjct: 168 IEDALALFDQIV-GMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYN 226

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI-V 490
            L+ GLC   +  +A  + + ++      N    TA++D  ++ G+  +A +L++  I +
Sbjct: 227 SLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQM 286

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
             YP DV +YT  I GL   GR +EA  ++  M+     PN  TY  ++  FCK + ++
Sbjct: 287 SVYP-DVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVE 344



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 63/267 (23%), Positives = 118/267 (44%), Gaps = 3/267 (1%)

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV---EADLVVYN 396
            +++ALD++  ++  + +P    F  LLS +    RF ++  L   +++      L   N
Sbjct: 62  QFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCN 121

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            +++  C++  P +A      M+  GF PD  +F  LL G C   +I++A+ ++  IV  
Sbjct: 122 IVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGM 181

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
               N   +T ++  L +    + A+++F +        +VV+Y   + GL E GR  +A
Sbjct: 182 GFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDA 241

Query: 517 YILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKF 576
             L   M    + PN  T+  ++ +F K   I   K L + +I   +  D  T   L   
Sbjct: 242 AWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALING 301

Query: 577 IFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           +  +     A      M + G  P+E+
Sbjct: 302 LCTYGRLDEARQMFYLMESNGYYPNEV 328


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 138/578 (23%), Positives = 244/578 (42%), Gaps = 41/578 (7%)

Query: 48  LAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIV 107
           L    + S   NCP                ++ H +QSF  MI ++ R + R    + ++
Sbjct: 113 LGQRFIDSITSNCP----------------NFKHSLQSFSAMIHILVR-SRRLPDAQAVI 155

Query: 108 GELARVGCVIKAQ-----------------TFLLFLRIYWRGEMYGMVLEAFDEMGRFGF 150
             + R   V + +                  F L +R Y +        EAF  +   G 
Sbjct: 156 LRMVRKSGVSRVEIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGL 215

Query: 151 TPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP----NFLSFNIALCNLCKLNDVSNVKD 206
             +  A N ++  L K+G VDL  ++ +E        N  + NI +  LCK   + N K 
Sbjct: 216 CVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKS 275

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
            +  M  KG +P+V  +  L+N +C+ G + EA++L+  M   G    V  +  +I+G  
Sbjct: 276 FLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLC 335

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
           +  +   A  + ++M++ G SP+  TY  L+           A    D + S+G  PDLV
Sbjct: 336 KTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLV 395

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL 386
             + LI  LSK G  D AL  +  +    L PD+  +  L+   C +G  S   K+   +
Sbjct: 396 SFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEM 455

Query: 387 EVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
             +    D+V YN +L+  CK    ++A +L+  M ++G  PD Y+F  L+ G      +
Sbjct: 456 LEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNM 515

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           ++A+ +++ ++  N   +   +  ++D   +     K  +L+   I  +   + +SY + 
Sbjct: 516 NKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGIL 575

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           I G    G   EA+ L+ +M          T   ++  +C+  N       L +++   I
Sbjct: 576 INGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGI 635

Query: 564 ELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
             D  T   L     K  +   A   + +M N GL+PD
Sbjct: 636 VPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPD 673



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 114/527 (21%), Positives = 221/527 (41%), Gaps = 37/527 (7%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           +V + + MI+ + +   + E  +  + ++   G      T+   +  Y R  +     E 
Sbjct: 253 NVYTLNIMINALCK-NQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFEL 311

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET----QLPNFLSFNIALCNLCK 197
            D M   G  P  F  N +++ L K G+      VL E       P+  ++NI L   C+
Sbjct: 312 MDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCR 371

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            +++ + + +   M  +G  P++  F  L+    K G + +A +    M   G +     
Sbjct: 372 NDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVI 431

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T+LI GF R   +  A  + ++M++ GC  +VVTY +++ G  + KM S A      + 
Sbjct: 432 YTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMT 491

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G  PD      LI+  SK G+ + A+ +++ +++  L PD                  
Sbjct: 492 ERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPD------------------ 533

Query: 378 LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
                         +V YN L+  FCK     +  +L+N M+ +   P++ S+  L+ G 
Sbjct: 534 --------------VVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGY 579

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
           C    + EA  ++  +V             IV     AG   KA +     +++    D 
Sbjct: 580 CNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDG 639

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
           ++Y   I G ++    + A+ L ++M++  + P+  TY V+L  F ++  ++  + ++  
Sbjct: 640 ITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLK 699

Query: 558 VIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMW 604
           +I+  +  D  T   L       ++   A     EM   G +PD+ +
Sbjct: 700 MIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDDKF 746



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/217 (21%), Positives = 92/217 (42%), Gaps = 18/217 (8%)

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID---------EA 446
           N+LL    K G+ + A ++Y  ++  G   + Y+   ++  LC  +KI+         E 
Sbjct: 223 NSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEE 282

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
             V+  +V  N  +NA+    +++         +A +L      +     V +Y   I G
Sbjct: 283 KGVFPDVVTYNTLINAYCRQGLLE---------EAFELMDSMSGKGLKPCVFTYNAIING 333

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           L + G+   A  +  +M  I + P+  TY ++L+  C+  N+   +R+  ++    +  D
Sbjct: 334 LCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPD 393

Query: 567 YHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
             +   L   + K      A+    +M N GL PD +
Sbjct: 394 LVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNV 430


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 127/465 (27%), Positives = 225/465 (48%), Gaps = 17/465 (3%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE-TQLPNFLSFNIALCNLCKL 198
           E FD M + G +PNT   + ++D L K G++D+ + +L++        +F+  L  LC+ 
Sbjct: 232 EFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQA 291

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
           +    +++ I ++      PNV  F  L+N  C+  R+ EA++L  +M   G S  V  +
Sbjct: 292 H---RLEEAIQLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITY 348

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQ-NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD-ML 316
            +L+ G  +LRR+  A    E M +  GCSPNVVT+++LI+G   A   + A+   + M+
Sbjct: 349 NILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMV 408

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
             EG +P+   +  L++ L K G        ++ +LE +    S       S    S   
Sbjct: 409 AVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSS-------SWPIHSPEV 461

Query: 377 SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
             L   VC       LV YN L++   K+G    A+ L   M++ G +PD  +F  +L G
Sbjct: 462 DFLMVQVC----RPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDG 517

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
           LC  ++I +A NV++  +      N   ++ ++D L +  +  +A+QL  + +      +
Sbjct: 518 LCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRAN 577

Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
            V+Y+  + GLL+ GR E+A ++  QM+     P+A TY  ++  F K + ++    LL+
Sbjct: 578 TVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLR 637

Query: 557 DVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           ++++A       T   L   + +      AV  L  M   G  P+
Sbjct: 638 EMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPN 682



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 118/471 (25%), Positives = 213/471 (45%), Gaps = 83/471 (17%)

Query: 141 AFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ------------------- 181
           AF +  +FGF P     + V+D L +   VD G K+L+E                     
Sbjct: 23  AFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALL 82

Query: 182 --------------------LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
                                P  ++F + +  LCK  ++     V+  MV +GF P+V 
Sbjct: 83  GQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVE 142

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
           +  +LL+  C++GR+ EA+     ++ +G +     +  ++DG  +  RL+ AG + + +
Sbjct: 143 IHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLL 202

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
            ++  SP V T+T  + G  +A   + A+ F D +   G +P+ V ++ LID L K G  
Sbjct: 203 AESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKL 262

Query: 342 DDALDVYDGLLELKLVPDS-YTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLS 400
           D AL    GLL  K      + F SLL  +C + R     +L+  +    ++V +N+L++
Sbjct: 263 DIAL----GLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPCVPNVVCFNSLMN 318

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
             C+A   ++A +L++ M + G + D  ++  LL+GLC  R+I EA              
Sbjct: 319 GLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEA-------------- 364

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
                             ++ ++L RR   E    +VV+++  I+GL   GR  +A+ +Y
Sbjct: 365 ------------------YRHVELMRR--TEGCSPNVVTFSTLIQGLCNAGRVNQAWEVY 404

Query: 521 SQMKHI-AVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
            +M  +  + PN +TY  +L   CK  +     R L+   +  +E ++ +S
Sbjct: 405 ERMVAVEGISPNRFTYAFLLEGLCKAGD----SRRLEQCFEQMLEREWRSS 451



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/458 (24%), Positives = 208/458 (45%), Gaps = 10/458 (2%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLK---ETQL-PNFLSFNIALCNLCKLNDVSNVKDV 207
           P     N ++  L K G V   + +L+   E+ L P+ ++FN  L  LCK   + +  +V
Sbjct: 471 PTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNV 530

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
               + +G  PNV  +  L++   KM ++ EA QLL  M+ LG   +   ++ ++DG  +
Sbjct: 531 FKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLK 590

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
           + R++ A  +  +M   GC P+ VTY +LI GF + +    A   L  +   G  P +V 
Sbjct: 591 VGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVT 650

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLV 383
           +  L   L + G +D+A+++ D +      P++ T+ S++  +C +GR +       K+ 
Sbjct: 651 YTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMA 710

Query: 384 CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
               V   ++ Y+AL+   CKAG  ++A +    M+  G  PD  +F  L+ GLC A +I
Sbjct: 711 RDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRI 770

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           D  + ++ G+       + + + A+++     G    A  L           + V++ + 
Sbjct: 771 DTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIV 830

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           I+ L    R +EA   +  +       +  +Y  ++ S    R  +    LL+ ++    
Sbjct: 831 IKALCGNDRIDEAVSYFHSIPEDC--RDEISYNTLITSLVASRRSEQALELLRAMVADGG 888

Query: 564 ELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
             D    + +   +FK  S   A   L EM + G  PD
Sbjct: 889 SPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPD 926



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/427 (23%), Positives = 212/427 (49%), Gaps = 10/427 (2%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALC 193
            L+   +M   G   NT   + V+D L K+GR++  + VL++ +    LP+ +++N  + 
Sbjct: 562 ALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLID 621

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
              K   +     ++  M+  GF+P+V  +  L +  C+ GR  EA ++L  M   G + 
Sbjct: 622 GFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAP 681

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGC-SPNVVTYTSLIKGFMEAKMFSIAFSF 312
           +   ++ ++DG  +  R+  A   +EKM ++   +P+V+ Y++LI G  +A     A+ F
Sbjct: 682 NAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEF 741

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
           L+ +   G  PD+V  ++LI+ L   G  D  L+++ G+ E     D Y + ++++  CL
Sbjct: 742 LERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCL 801

Query: 373 SGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
            G FS    L+  ++   +  + V +  ++   C     ++AV  ++++ +     D  S
Sbjct: 802 KGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPED--CRDEIS 859

Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
           +  L+  L  +R+ ++A+ + + +V +  + +A  +  ++D L +AG    A +L +   
Sbjct: 860 YNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMR 919

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
              +  D+ +YT+ I GL +  +   A   + +M    + P+A  Y  ++ +FCK   + 
Sbjct: 920 SRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVD 979

Query: 550 MVKRLLQ 556
              +LL+
Sbjct: 980 DAWKLLR 986



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 106/469 (22%), Positives = 215/469 (45%), Gaps = 13/469 (2%)

Query: 98   GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
            GR E    ++ ++   GC+  A T+   +  +++ +     +    EM   GF P+    
Sbjct: 592  GRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTY 651

Query: 158  NIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
              +   L + GR D  +++L         PN ++++  +  LCK   V+        M R
Sbjct: 652  TTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMAR 711

Query: 214  KGFY-PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
                 P+V  +  L++  CK GRI EAY+ L  MI  G    V  +++LI+G     R+D
Sbjct: 712  DEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRID 771

Query: 273  MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
                L+  M + GC  ++  Y ++I  +     FS A++ L+ +++ G A + V H ++I
Sbjct: 772  TGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVI 831

Query: 333  DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA-- 390
              L      D+A+  +  + E     D  ++ +L++++  S R     +L+  +  +   
Sbjct: 832  KALCGNDRIDEAVSYFHSIPED--CRDEISYNTLITSLVASRRSEQALELLRAMVADGGS 889

Query: 391  -DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
             D   Y  ++    KAG P  A KL   M  +G +PD  ++  ++ GL  A+++  A + 
Sbjct: 890  PDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDY 949

Query: 450  YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
            ++ ++  N   +A V+++++D   +A +   A +L R + +E     +  Y+  +  L +
Sbjct: 950  FEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLLRSSGIEP---TITMYSTMVDSLCK 1006

Query: 510  GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
               T++A  +  +MK     P  + +  +  ++  E  +    +L+ D+
Sbjct: 1007 NRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDL 1055



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 125/464 (26%), Positives = 205/464 (44%), Gaps = 68/464 (14%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIK---VLKETQL-PNFLSFNIALCNLCKLNDVSNVKDV 207
           PN    N +M+ L +  RVD   +   V+KE+    + +++NI L  LCKL  +      
Sbjct: 308 PNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRH 367

Query: 208 IGMMVR-KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL-GTSLSVNAWTVLIDGF 265
           + +M R +G  PNV  F  L+   C  GR+ +A+++   M+ + G S +   +  L++G 
Sbjct: 368 VELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGL 427

Query: 266 ------RRLRRL--DMAGYLWEK--------------MVQNGCSPNVVTYTSLIKGFMEA 303
                 RRL +    M    W                MVQ  C P +VTY +L+ G  ++
Sbjct: 428 CKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQV-CRPTLVTYNTLVTGLSKS 486

Query: 304 KMFSIAFSFLDMLESEGHAPDLV-----------------FHNV---------------- 330
            M   A   L+ +   G +PD++                  HNV                
Sbjct: 487 GMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTY 546

Query: 331 --LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCG 385
             LID LSKM   D+AL +   ++EL    ++ T+ +++  +   GR     ++ + +  
Sbjct: 547 STLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRD 606

Query: 386 LEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
                D V YN L+  F K     +AV L   ML+ GF P   ++  L  GLC + + DE
Sbjct: 607 AGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDE 666

Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR-AIVEKYPLDVVSYTVAI 504
           A+ +   +     A NA  +++IVD L +AGR  +A+  F + A  E     V++Y+  I
Sbjct: 667 AVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALI 726

Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
            GL + GR +EAY    +M      P+  T+ +++   C    I
Sbjct: 727 DGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRI 770



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/375 (24%), Positives = 174/375 (46%), Gaps = 9/375 (2%)

Query: 185 FLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLG 244
            +++N+ +  LCK   V +        ++ GF P V  +  +++  C+   + +  +LL 
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 245 LMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
            M   G + +   +  L++      R   A  L E+M  NGC P ++T+  +IKG  +  
Sbjct: 61  EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
               AF  +D +   G  PD+  H VL+  L ++G  D+A   +  +L +   PD+ T+ 
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180

Query: 365 SLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
           +++  +  +GR     ++ +L+        +  +   +    KAG    A + +++M   
Sbjct: 181 TMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQT 240

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
           G +P+  ++  L+ GLC A K+D A+ + +     N        ++++  L +A R  +A
Sbjct: 241 GVSPNTVTYDALIDGLCKAGKLDIALGLLRD---KNSQAGMFAFSSLLHGLCQAHRLEEA 297

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
           IQL +   +   P +VV +   + GL +  R +EA+ L+  MK      +  TY ++L  
Sbjct: 298 IQLLK--AMPCVP-NVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKG 354

Query: 542 FCKERNIKMVKRLLQ 556
            CK R I    R ++
Sbjct: 355 LCKLRRIPEAYRHVE 369



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 124/272 (45%), Gaps = 5/272 (1%)

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
           +VTY  LI G  +A     AF+        G  P +V ++ +ID L +    D    + +
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 350 GLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKA 405
            +      P++ T+ +L++ +   GR    FSLL ++        +L+ +  ++   CK 
Sbjct: 61  EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAAN-GCPPELITFGLIIKGLCKE 119

Query: 406 GFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVH 465
           G    A ++ + M+D+GF PD      LL  LC   ++DEA   +Q +++     +A  +
Sbjct: 120 GEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTY 179

Query: 466 TAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKH 525
             +VD L +AGR   A  + +          V ++T+A+ GL + G    AY  +  M  
Sbjct: 180 NTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQ 239

Query: 526 IAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
             V PN  TY  ++   CK   + +   LL+D
Sbjct: 240 TGVSPNTVTYDALIDGLCKAGKLDIALGLLRD 271



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 79/347 (22%), Positives = 149/347 (42%), Gaps = 10/347 (2%)

Query: 47   ILAPHIV-HSTLLN--CPSDLIALSF-FIWCAKQRDYFHDVQSFDHMISVVTRLTGRFET 102
            ++APH++ +S L++  C +  I  ++ F+    +     DV +F  +I+ +    GR +T
Sbjct: 714  VVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCD-AGRIDT 772

Query: 103  VRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMD 162
               +   +A  GC      +   +  Y     +       +EM   G   NT    IV+ 
Sbjct: 773  GLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIK 832

Query: 163  VLFKIGRVDLGIKVLKE--TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV 220
             L    R+D  +           + +S+N  + +L          +++  MV  G  P+ 
Sbjct: 833  ALCGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDA 892

Query: 221  RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
              +  +++   K G    A +LL  M + G S  +  +T++I G  + ++L +A   +E+
Sbjct: 893  CNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEE 952

Query: 281  MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
            M++    P+ + Y+SLI  F +A     A+    +L S G  P +  ++ ++D L K   
Sbjct: 953  MLRKNLKPDAIVYSSLIDAFCKADKVDDAWK---LLRSSGIEPTITMYSTMVDSLCKNRG 1009

Query: 341  YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE 387
             D AL+V   +      P  + + SL +     GR     KLV  L+
Sbjct: 1010 TDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 199/405 (49%), Gaps = 7/405 (1%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF----LSFNIALCNLCK 197
            D M   GF PN      V++V+ K G+  L +++L++ +  N     + ++I +  LCK
Sbjct: 216 IDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              + N  ++   M  KGF  ++  +  L+  FC  GR  +  +LL  MI    S +V  
Sbjct: 276 DGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVT 335

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           ++VLID F +  +L  A  L ++M+Q G +PN +TY SLI GF +      A   +D++ 
Sbjct: 336 FSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMI 395

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
           S+G  PD++  N+LI+   K    DD L+++  +    ++ ++ T+ +L+   C SG+  
Sbjct: 396 SKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLE 455

Query: 378 LLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
           +  KL   +    V  D+V Y  LL   C  G   +A++++  +       D   ++ ++
Sbjct: 456 VAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIII 515

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            G+C A K+D+A +++  + +    ++A  +  ++  L       KA  LFR+   E + 
Sbjct: 516 HGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHA 575

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
            D ++Y + IR  L       A  L  +MK    P +  T ++++
Sbjct: 576 PDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVI 620



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 130/569 (22%), Positives = 252/569 (44%), Gaps = 42/569 (7%)

Query: 45  PIILAPHIVHSTLLNCPSDLI-----ALSFF-----------------IWCAKQRDYFHD 82
           P +L    +   L+NCP++L+       S F                 I      D F D
Sbjct: 19  PRLLETGTLRIALINCPNELLFCCERGFSTFSDRNLSYRDKLSSGLVGIKADDAVDLFRD 78

Query: 83  -VQS--------FDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGE 133
            +QS        F+ + S + + T ++E V  +  ++   G      T  + +  + R  
Sbjct: 79  MIQSRPLPTVIDFNRLFSAIAK-TKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCR 137

Query: 134 MYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFN 189
                     ++ + G+ P+T   N +++ L    RV    +L  ++++    P  ++ N
Sbjct: 138 KLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLN 197

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
             +  LC    VS+   +I  MV  GF PN   +  +LN  CK G+ A A +LL  M   
Sbjct: 198 TLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEER 257

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
              L    ++++IDG  +   LD A  L+ +M   G   +++TY +LI GF  A  +   
Sbjct: 258 NIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDG 317

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
              L  +     +P++V  +VLID   K G   +A  +   +++  + P++ T+ SL+  
Sbjct: 318 AKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDG 377

Query: 370 VCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
            C   R      +  L+     + D++ +N L++ +CKA   +  ++L+  M  +G   +
Sbjct: 378 FCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIAN 437

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
             ++  L++G C + K++ A  ++Q +V      +   +  ++D L + G   KA+++F 
Sbjct: 438 TVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFG 497

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
           +    K  LD+  Y + I G+    + ++A+ L+  +    V  +A  Y +M+   C++ 
Sbjct: 498 KIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKD 557

Query: 547 NIKMVKRLLQDVID---ARIELDYHTSIR 572
           ++     L + + +   A  EL Y+  IR
Sbjct: 558 SLSKADILFRKMTEEGHAPDELTYNILIR 586



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/337 (23%), Positives = 156/337 (46%), Gaps = 3/337 (0%)

Query: 270 RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHN 329
           + D A  L+  M+Q+   P V+ +  L     + K + +  +    +ES+G A  +   +
Sbjct: 68  KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127

Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV---CGL 386
           ++I+C  +      A      +++L   PD+  F +LL+ +CL  R S   +LV     +
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
             +  L+  N L++  C  G  + AV L + M++ GF P+  ++  +L  +C + +   A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
           + + + +   N  ++A  ++ I+D L + G    A  LF    ++ +  D+++Y   I G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
               GR ++   L   M    + PN  T+ V++ SF KE  ++   +LL++++   I  +
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367

Query: 567 YHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
             T   L     K +    A+  +  M + G  PD M
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIM 404


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 130/551 (23%), Positives = 238/551 (43%), Gaps = 43/551 (7%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           +TGR      ++  +   GC   A ++   +  +++          FDEM + G  P+  
Sbjct: 158 ITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDIL 217

Query: 156 ARNIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
             N ++ VL K G V     L  KV+K    PN  +FNI +  LC+   +     ++  +
Sbjct: 218 TFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESI 277

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
           V +G  P+V  +  L+  FCK  ++ EA   L  M+  G   +   +  +I+GF +   +
Sbjct: 278 VSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMM 337

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
             A  +    +  G  P+  TY+SLI G       + A +       +G    ++ +N L
Sbjct: 338 QNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTL 397

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA- 390
           +  LSK G    AL +   ++E    PD +T+  +++ +C  G  S    ++     +  
Sbjct: 398 VKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGC 457

Query: 391 --DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
             D+  +N L+  +CK    ++A+++ +TML  G TPD  ++  LL GLC ARK+D  ++
Sbjct: 458 IPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVD 517

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
            ++ ++      N   +  +++   +  +  +A++LF+         D+V+    I GL 
Sbjct: 518 TFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLC 577

Query: 509 EGGRTEEAY------------------------------------ILYSQMKHIAVPPNA 532
             G  ++AY                                     L+ +M      P+ 
Sbjct: 578 SNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDN 637

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVE 592
           YTYRVM+ S+CK  NI +    L + I   +   + T  ++   +   H  S AV  +  
Sbjct: 638 YTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINL 697

Query: 593 MCNLGLIPDEM 603
           M   G++P+E+
Sbjct: 698 MVQNGIVPEEV 708



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 120/554 (21%), Positives = 236/554 (42%), Gaps = 44/554 (7%)

Query: 48  LAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIV 107
           L P  V + +      L AL  F     +  + H ++++  MI  +  L G+FE +  ++
Sbjct: 5   LQPKHVAAVIRYQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLG-LHGKFEAMEDVL 63

Query: 108 GELAR-VGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK 166
            E+ + V   +    ++  +R Y R       +  F+ M  +   P+  + N +M++L +
Sbjct: 64  AEMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVE 123

Query: 167 IGRV-----------DLGIKVLKETQLPNFLSFNIA---------LCNL----CKLNDVS 202
            G             D+GI     T      SF I          L N+    C+ N VS
Sbjct: 124 YGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVS 183

Query: 203 NVKDVIGM---------------MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
               + G                M+++G  P++  F  L++  CK G + E+ +L   ++
Sbjct: 184 YCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVM 243

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
             G   ++  + + I G  R   +D A  L E +V  G +P+V++Y +LI GF +     
Sbjct: 244 KRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLV 303

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A  +L  + + G  P+   +N +I+   K G   +A  +    +    +PD +T+ SL+
Sbjct: 304 EAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLI 363

Query: 368 STVCLSGRFS-LLPKLVCGLE--VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
           + +C  G  +  +      +E   +  +++YN L+    K G   QA++L   M++ G +
Sbjct: 364 NGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCS 423

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           PD +++  ++ GLC    + +A  +    +      +      ++D   +     KAI++
Sbjct: 424 PDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEI 483

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
               +      DV++Y   + GL +  + +     +  M      PN  TY +++ SFCK
Sbjct: 484 LDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCK 543

Query: 545 ERNIKMVKRLLQDV 558
           +R +     L +++
Sbjct: 544 DRKVSEAMELFKEM 557



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/375 (21%), Positives = 156/375 (41%), Gaps = 3/375 (0%)

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
           + + G++ EA  +   M       SV ++  +++          A  ++ +M   G  P+
Sbjct: 86  YGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPD 145

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
           V T+T  +K F      + A   L+ +  +G   + V +  +I    K     +A  ++D
Sbjct: 146 VYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFD 205

Query: 350 GLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAG 406
            +L+  + PD  TF  L+  +C  G      KL   V    V  +L  +N  +   C+ G
Sbjct: 206 EMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKG 265

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
             ++A +L  +++ +G TPD  S+  L+ G C   K+ EA      +V +    N   + 
Sbjct: 266 AIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYN 325

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
            I++   +AG    A ++ R A+ + +  D  +Y+  I GL   G    A  ++ +    
Sbjct: 326 TIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEK 385

Query: 527 AVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSA 586
               +   Y  ++    K+  +    +L++D+++     D  T   +   + K    S A
Sbjct: 386 GFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDA 445

Query: 587 VNQLVEMCNLGLIPD 601
              L +    G IPD
Sbjct: 446 NGILNDAIAKGCIPD 460



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/284 (21%), Positives = 131/284 (46%), Gaps = 6/284 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D+ +++ +++ + ++ G      GI+ +    GC+    TF   +  Y +       +E 
Sbjct: 425 DIWTYNLVVNGLCKM-GCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEI 483

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIK----VLKETQLPNFLSFNIALCNLCK 197
            D M   G TP+    N +++ L K  ++D  +     +L++   PN +++NI + + CK
Sbjct: 484 LDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCK 543

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL-LGLMITLGTSLSVN 256
              VS   ++   M  +G  P++     L+   C  G + +AY+L + +      S S  
Sbjct: 544 DRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTA 603

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
            + ++I+ F     + MA  L+ KM  + C+P+  TY  +I  + +     +A +FL   
Sbjct: 604 IFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLEN 663

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
            S+G  P       +++CL       +A+ + + +++  +VP+ 
Sbjct: 664 ISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEE 707



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 113/254 (44%), Gaps = 15/254 (5%)

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
           + E  +  YNA+++   + G+ +QA K+Y  M D G  PD Y+    ++  C   +   A
Sbjct: 106 DCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAA 165

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
           + +   +       NA  + A++    +     +A  LF   + +    D++++   I  
Sbjct: 166 LRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHV 225

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           L + G  +E+  L+S++    V PN +T+ + +   C++  I    RLL+ ++   +  D
Sbjct: 226 LCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPD 285

Query: 567 YHTSIRLTKFIFKFHSSSSAVNQ---LVEMCNLGLIPDEM--------WRKLGLLSD-ET 614
               I     I  F   S  V     L +M N G+ P+E         + K G++ + + 
Sbjct: 286 V---ISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADK 342

Query: 615 MTPVSLFDGFVPCE 628
           +   ++F GF+P E
Sbjct: 343 ILRDAMFKGFIPDE 356


>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 643

 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 107/430 (24%), Positives = 200/430 (46%), Gaps = 12/430 (2%)

Query: 133 EMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSF 188
            M G V+  +D M + G  PN F  N+++  L +  RV    K+L E       P+ +++
Sbjct: 138 NMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTY 197

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
              +  LCKL+ +    +V+  M      P    +  ++   C+  R+ E + ++  M+ 
Sbjct: 198 ATIVSVLCKLDRLDEATEVLAAMP-----PVAASYNAIVLALCREFRMQEVFSVVSDMVG 252

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
            G   +V  +T ++D F +   L MA  +  +MV  GC+PNVVT+T+L++G  +      
Sbjct: 253 RGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHD 312

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A      + +EG AP  V +N+LI  L  +G    A  + + + +    P+  T+ +L+ 
Sbjct: 313 ALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLID 372

Query: 369 TVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
               +G       +   +     + ++VVY  ++  FCK    NQA  L + ML +   P
Sbjct: 373 GFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPP 432

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           +  +F  L+R LC  R++  A+ V+  +  +    N   +  ++  L   G C  A+ + 
Sbjct: 433 NTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMV 492

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
                    L +V+Y   + GL +   + EA +   +M    + PNA+T+  ++ ++CKE
Sbjct: 493 TEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKE 552

Query: 546 RNIKMVKRLL 555
             ++M   +L
Sbjct: 553 GEVRMAAWML 562



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 105/457 (22%), Positives = 190/457 (41%), Gaps = 39/457 (8%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET 180
           T+ L +R   +    G   +  DEM R G  P+      ++ VL K+ R+D   +VL   
Sbjct: 161 TYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAM 220

Query: 181 QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAY 240
             P   S+N  +  LC+   +  V  V+  MV +G  PNV  +  +++ FCK G +  A 
Sbjct: 221 P-PVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMAC 279

Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
            +L  M+  G + +V  +T L+ G     R+  A  +W  MV  G +P+ V+Y  LI+G 
Sbjct: 280 AILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGL 339

Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
                   A S L+ +E  G  P++  ++ LID  SK G    A+ +++ +      P+ 
Sbjct: 340 CSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNV 399

Query: 361 YTFCSLLSTVCLSGRFSLLPKLVCGLEVE---ADLVVYNALLSYFCKAGFPNQAVKLYNT 417
             + +++   C    F+    L+  + +E    + V +N L+   C      +A+ +++ 
Sbjct: 400 VVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHE 459

Query: 418 MLDKGFTPDNYSFV----GLLR-------------------------------GLCGARK 442
           M   G  P+  ++     GL R                               GLC  R 
Sbjct: 460 MRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRM 519

Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTV 502
             EA+     +++     NA   +AI+    + G    A  +     V     +++ YT+
Sbjct: 520 SREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTI 579

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
            +  L    +  +A     +M +  + PN  T+ V++
Sbjct: 580 LMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLV 616



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 94/424 (22%), Positives = 178/424 (41%), Gaps = 37/424 (8%)

Query: 178 KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIA 237
           K+   PN  ++N+ +  LC+ N V   + ++  M RKG  P+   +  +++  CK+ R+ 
Sbjct: 152 KDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLD 211

Query: 238 EAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLI 297
           EA ++L  M  +  S     +  ++    R  R+     +   MV  G  PNV+TYT+++
Sbjct: 212 EATEVLAAMPPVAAS-----YNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIV 266

Query: 298 KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
             F +A    +A + L  +   G  P++V    L+  L   G   DALD++  ++     
Sbjct: 267 DAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWA 326

Query: 358 PDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
           P +                                V YN L+   C  G    A  + N+
Sbjct: 327 PST--------------------------------VSYNILIRGLCSVGDLKGASSILNS 354

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           M   G  P+  ++  L+ G   A  +  AI+++  +  +    N  V+T +VD   +   
Sbjct: 355 MEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLM 414

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
            ++A  L  + ++E  P + V++   IR L +  R   A  ++ +M+     PN  TY  
Sbjct: 415 FNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNE 474

Query: 538 MLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLG 597
           ++    +E N      ++ ++    IEL   T   +   + +   S  A+  + +M   G
Sbjct: 475 LIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQG 534

Query: 598 LIPD 601
           + P+
Sbjct: 535 IQPN 538



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 91/400 (22%), Positives = 163/400 (40%), Gaps = 42/400 (10%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           R + V  +V ++   G      T+   +  + +     M       M   G TPN     
Sbjct: 239 RMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFT 298

Query: 159 IVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
            ++  LF  GRV    D+   ++ E   P+ +S+NI +  LC + D+     ++  M + 
Sbjct: 299 ALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQH 358

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           G +PNVR +  L++ F K G +  A  +   M   G   +V  +T ++D F +    + A
Sbjct: 359 GCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQA 418

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             L +KM+   C PN VT+ +LI+   + +    A      +   G  P+   +N LI  
Sbjct: 419 KSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHG 478

Query: 335 LSKMGSYDDALDVYDGL----LELKLV-------------------------------PD 359
           L + G+  DAL +   +    +EL LV                               P+
Sbjct: 479 LFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPN 538

Query: 360 SYTFCSLLSTVCLSGRFSLLPKLVCGLEV---EADLVVYNALLSYFCKAGFPNQAVKLYN 416
           ++TF +++   C  G   +   ++  + V     +++VY  L++  C       A+    
Sbjct: 539 AFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLL 598

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            ML +G  P+  ++  L+RG+       E  +  Q I MN
Sbjct: 599 KMLYEGIYPNTVTWNVLVRGVFRNLGCIEPSDFIQHITMN 638



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 60/278 (21%), Positives = 117/278 (42%), Gaps = 6/278 (2%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G  +    I+  + + GC    +T+   +  + +    G  +  +++M R G  PN    
Sbjct: 343 GDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVY 402

Query: 158 NIVMDV-----LFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
             ++DV     +F   +  L  K+L E   PN ++FN  + +LC    V     V   M 
Sbjct: 403 TNMVDVFCKKLMFNQAK-SLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMR 461

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
           R G  PN R +  L++   + G   +A  ++  M + G  LS+  +  ++ G  + R   
Sbjct: 462 RHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSR 521

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A     KM+  G  PN  T++++I  + +     +A   L  +       +++ + +L+
Sbjct: 522 EAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILM 581

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
             L       DA+     +L   + P++ T+  L+  V
Sbjct: 582 AELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGV 619


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 136/524 (25%), Positives = 231/524 (44%), Gaps = 25/524 (4%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           TG  +    I GE+ R G  +   T  + +    +   +  V+    +M   G   +   
Sbjct: 235 TGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVT 294

Query: 157 RNIVMDVLFKIGRVDLGIKVLKE----TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N +++   + G V+   ++L         P  L++N  L  LCK+      KDV+  M+
Sbjct: 295 YNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEML 354

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
           + G  PN   +  LL   C+   I EA ++   M   G    + +++ LI    R   L 
Sbjct: 355 QLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLY 414

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A   + +M ++G  P+ V YT LI GF      S A    D + + G   D+V +N  +
Sbjct: 415 QALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFL 474

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVE 389
           + L K   + DA  +++ ++E  +VPD YTF +L+   C  G       L   +    ++
Sbjct: 475 NGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLK 534

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            D V YN L+  FCKAG   +A +L++ M+ K   PD+ S+  +L G C +  + EA+N+
Sbjct: 535 PDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNL 594

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
              ++      N      ++     +G   KA +   + I      D  SY   I G L+
Sbjct: 595 CDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLK 654

Query: 510 GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD--- 566
               E+A+IL ++M+   +  N  TY ++L  FC E  ++  +++L+ +I+  I  D   
Sbjct: 655 EANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGAT 714

Query: 567 ------YHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMW 604
                  H S    K  F+FH          EM   GL+PD+ +
Sbjct: 715 YSSLINGHVSQDNMKEAFRFHD---------EMLQRGLVPDDRF 749



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 117/447 (26%), Positives = 201/447 (44%), Gaps = 7/447 (1%)

Query: 124 LFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP 183
           L +R Y + +      EAF  + R G + +  A N ++  L + G VDL  ++  E    
Sbjct: 192 LLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRG 251

Query: 184 ----NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEA 239
               N  + NI +  LCK     NV   +  M  KG + ++  +  L+N +C+ G + EA
Sbjct: 252 GIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEA 311

Query: 240 YQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG 299
           +QLL    + G    +  +  ++ G  ++ + D A  +  +M+Q G +PN  TY +L+  
Sbjct: 312 FQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVE 371

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
                    A    D +   G  PDLV  + LI  L++ G    AL  +  +    +VPD
Sbjct: 372 ICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPD 431

Query: 360 SYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYN 416
           +  +  L+   C +G  S   K+   +       D+V YN  L+  CK      A  L+N
Sbjct: 432 NVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFN 491

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
            M+++G  PD Y+F  L+RG C    +D+A+N+++ +V  N   +   +  ++D   +AG
Sbjct: 492 EMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAG 551

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
              +A +L+   I +    D +SY   + G    G   EA  L  QM    + PN  T  
Sbjct: 552 EMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCN 611

Query: 537 VMLLSFCKERNIKMVKRLLQDVIDARI 563
            ++  +C+  ++      L  +I   I
Sbjct: 612 TLIKGYCRSGDMPKAYEYLSKMISNGI 638


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 136/524 (25%), Positives = 231/524 (44%), Gaps = 25/524 (4%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           TG  +    I GE+ R G  +   T  + +    +   +  V+    +M   G   +   
Sbjct: 235 TGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVT 294

Query: 157 RNIVMDVLFKIGRVDLGIKVLKE----TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N +++   + G V+   ++L         P  L++N  L  LCK+      KDV+  M+
Sbjct: 295 YNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEML 354

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
           + G  PN   +  LL   C+   I EA ++   M   G    + +++ LI    R   L 
Sbjct: 355 QLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLY 414

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A   + +M ++G  P+ V YT LI GF      S A    D + + G   D+V +N  +
Sbjct: 415 QALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFL 474

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVE 389
           + L K   + DA  +++ ++E  +VPD YTF +L+   C  G       L   +    ++
Sbjct: 475 NGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLK 534

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            D V YN L+  FCKAG   +A +L++ M+ K   PD+ S+  +L G C +  + EA+N+
Sbjct: 535 PDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNL 594

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
              ++      N      ++     +G   KA +   + I      D  SY   I G L+
Sbjct: 595 CDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLK 654

Query: 510 GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD--- 566
               E+A+IL ++M+   +  N  TY ++L  FC E  ++  +++L+ +I+  I  D   
Sbjct: 655 EANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGAT 714

Query: 567 ------YHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMW 604
                  H S    K  F+FH          EM   GL+PD+ +
Sbjct: 715 YSSLINGHVSQDNMKEAFRFHD---------EMLQRGLVPDDRF 749



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 117/447 (26%), Positives = 201/447 (44%), Gaps = 7/447 (1%)

Query: 124 LFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP 183
           L +R Y + +      EAF  + R G + +  A N ++  L + G VDL  ++  E    
Sbjct: 192 LLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRG 251

Query: 184 ----NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEA 239
               N  + NI +  LCK     NV   +  M  KG + ++  +  L+N +C+ G + EA
Sbjct: 252 GIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEA 311

Query: 240 YQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG 299
           +QLL    + G    +  +  ++ G  ++ + D A  +  +M+Q G +PN  TY +L+  
Sbjct: 312 FQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVE 371

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
                    A    D +   G  PDLV  + LI  L++ G    AL  +  +    +VPD
Sbjct: 372 ICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPD 431

Query: 360 SYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYN 416
           +  +  L+   C +G  S   K+   +       D+V YN  L+  CK      A  L+N
Sbjct: 432 NVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFN 491

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
            M+++G  PD Y+F  L+RG C    +D+A+N+++ +V  N   +   +  ++D   +AG
Sbjct: 492 EMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAG 551

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
              +A +L+   I +    D +SY   + G    G   EA  L  QM    + PN  T  
Sbjct: 552 EMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCN 611

Query: 537 VMLLSFCKERNIKMVKRLLQDVIDARI 563
            ++  +C+  ++      L  +I   I
Sbjct: 612 TLIKGYCRSGDMPKAYEYLSKMISNGI 638


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 129/547 (23%), Positives = 235/547 (42%), Gaps = 53/547 (9%)

Query: 74  AKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGE 133
           AK   +   V S++ ++  V R     +   GI  E+   G      T+ + +R +    
Sbjct: 158 AKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAG 217

Query: 134 MYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFN 189
              M L  F EM R G  PN    N ++D   K+ ++    K+L+   L    PN +S+N
Sbjct: 218 NLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYN 277

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
           + +  LC+   +    +++  M ++ + P+   F  L+N +C +G   +A  L   M+  
Sbjct: 278 VVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKN 337

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           G S +V  +T LI+   +   L+ A    ++M   G  PN  TYT+LI GF +      A
Sbjct: 338 GLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQA 397

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
           +  +  +   G  P ++ +N LI+    +G  +DA  +   ++E   +P           
Sbjct: 398 YQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIP----------- 446

Query: 370 VCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
                                D+V Y+ ++S FC+     +A +L   M+ KG +PD  +
Sbjct: 447 ---------------------DVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVAT 485

Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
           +  L++GLC  R++ E  +++Q ++      +   +T++++     G   KA++L    I
Sbjct: 486 YSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMI 545

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
            + +  D+V+Y V I G  +  RT+EA  L  ++ +    PN  TY   L+  C     K
Sbjct: 546 QKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNT-LIDNCNNLEFK 604

Query: 550 MVKRLLQD------------VIDARIELDYHTSIRLTKFIFKFHSS----SSAVNQLVEM 593
               L++             V+++ ++  Y  +  +   I   HS       A N   EM
Sbjct: 605 SALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEM 664

Query: 594 CNLGLIP 600
            + G  P
Sbjct: 665 LHSGFAP 671



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 118/509 (23%), Positives = 225/509 (44%), Gaps = 59/509 (11%)

Query: 108 GELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKI 167
           GE+ R GC+    T+   +  Y +    G   +    M   G  PN  + N+V++ L + 
Sbjct: 227 GEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCRE 286

Query: 168 GRVDLGIKVLKETQ----LPNFLSFNIAL---CN-------------------------- 194
           G++    ++L+E      +P+ ++FN  +   CN                          
Sbjct: 287 GQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTY 346

Query: 195 ------LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
                 +CK  +++   + +  M  +G +PN R +  L++ F + G + +AYQ++  M+ 
Sbjct: 347 TTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVE 406

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
            G + ++  +  LI+G   L R++ A  L ++M++ G  P+VV+Y+++I GF   +    
Sbjct: 407 NGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEK 466

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           AF     + ++G +PD+  ++ LI  L K     +  D++  +L L L PD  T+ SL++
Sbjct: 467 AFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLIN 526

Query: 369 TVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKL----------- 414
             C+ G      +L   +       D+V YN L++ F K     +A +L           
Sbjct: 527 AYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVP 586

Query: 415 ----YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
               YNT++D     +  S + L++G C    ++EA  V + ++     +N  V+  I+ 
Sbjct: 587 NEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIH 646

Query: 471 RLIEAGRCHKAIQLFRRAIVEKY-PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
              + G   KA  L++  +   + P  V    +A     EG   E   +L   +K   + 
Sbjct: 647 GHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRIT 706

Query: 530 PNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
             A   +V++    KE N+  V  +L+D+
Sbjct: 707 EAALA-KVLIGINSKEGNMDAVFNVLKDM 734



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 114/485 (23%), Positives = 215/485 (44%), Gaps = 18/485 (3%)

Query: 137 MVLEAFDEMGR--FGFTPNTF----ARNIVMDVLFK-IGRVDLGIKVLKETQL------- 182
           +V+   DE G   F    N++    + + V D++ K   RV+L  K L    L       
Sbjct: 105 VVVNTVDETGEDLFQCLKNSYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFM 164

Query: 183 PNFLSFNIALCNLCKL-NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
           P  LS+N  L  + +    V   + +   MV  G  PNV  + IL+  FC  G +     
Sbjct: 165 PGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLF 224

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
             G M   G   +V  +  +ID + +LR++  A  L   M   G +PN+++Y  +I G  
Sbjct: 225 FFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLC 284

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
                      L+ +    + PD V  N LI+    +G++  AL ++  +++  L P+  
Sbjct: 285 REGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVV 344

Query: 362 TFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           T+ +L++++C +G  +   + +  +    +  +   Y  L+  F + GF  QA ++   M
Sbjct: 345 TYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEM 404

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
           ++ GFTP   ++  L+ G C   ++++A  + Q ++      +   ++ I+         
Sbjct: 405 VENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQEL 464

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            KA QL    + +    DV +Y+  I+GL +  R  E   L+ +M  + +PP+  TY  +
Sbjct: 465 EKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSL 524

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGL 598
           + ++C E ++    RL  ++I      D  T   L     K   +  A   L+++     
Sbjct: 525 INAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEES 584

Query: 599 IPDEM 603
           +P+E+
Sbjct: 585 VPNEI 589


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 120/496 (24%), Positives = 221/496 (44%), Gaps = 9/496 (1%)

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNI 190
           Y  VL    +M  FG  PN +  NI+++    + RV        K+LK    P+  +F  
Sbjct: 72  YSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTT 131

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +  LC    +     +   M+ +GF PNV  +  L+N  CK+G  + A +LL  M    
Sbjct: 132 LIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGN 191

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
               V  +T +ID   + R++  A  L+ +MV  G SP++ TYTSL+        +    
Sbjct: 192 CQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVT 251

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
           + L+ + +    PD+V  + ++D L K G   +A ++ D +++  + PD  T+ +L+   
Sbjct: 252 TLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGH 311

Query: 371 CLSGRFSLLPK---LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           CL        K   ++       D++ Y  L++ +CK    ++A+ L+  M  K + PD 
Sbjct: 312 CLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDT 371

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
            ++  L+ GLC   ++ +AI ++  +V      +   ++ ++D L +     +A+ L + 
Sbjct: 372 KTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKA 431

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN 547
                   D+  Y + I G+   G  E A  L+S +    + P+ +TY +M+   CK   
Sbjct: 432 IEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGL 491

Query: 548 IKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKL 607
           +    +L  ++       D  T   + +   + + +  A+  L EM   G   D     L
Sbjct: 492 LNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTL 551

Query: 608 --GLLSDETMTPVSLF 621
              +LSD+ +   S F
Sbjct: 552 LVEMLSDDGLDQSSCF 567



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 193/388 (49%), Gaps = 5/388 (1%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+ + F   L ++ K+   S V  +   M   G  PNV    IL+N FC + R+  A+ +
Sbjct: 54  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 113

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           L  ++ LG       +T LI G     ++  A +L++KM+  G  PNVVTY +LI G  +
Sbjct: 114 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 173

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
               S A   L  +E     PD+V +  +ID L K     +A +++  ++   + PD +T
Sbjct: 174 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 233

Query: 363 FCSLLSTVCLSGRF----SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           + SL+  +C    +    +LL ++V   ++  D+V+++ ++   CK G   +A ++ + M
Sbjct: 234 YTSLVHALCNLCEWKHVTTLLNQMV-NSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMM 292

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
           + +G  PD  ++  L+ G C   ++DEA+ V+  +V    A +   +T +++   +  + 
Sbjct: 293 IQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKI 352

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            KA+ LF     +++  D  +Y   + GL   GR ++A  L+ +M      P+  TY ++
Sbjct: 353 DKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSIL 412

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELD 566
           L S CK  +++    LL+ +  + +  D
Sbjct: 413 LDSLCKNCHLEEAMALLKAIEASNLNPD 440



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 103/459 (22%), Positives = 201/459 (43%), Gaps = 48/459 (10%)

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           ++ ++ ++G      TF   +R        G  L  FD+M   GF PN      +++ L 
Sbjct: 113 VLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLC 172

Query: 166 KIGRVDLGIKVLKETQLPN----------------------------------------- 184
           K+G     I++L+  +  N                                         
Sbjct: 173 KVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIF 232

Query: 185 -FLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
            + S   ALCNLC+   V+ +   +  MV     P+V +F  +++  CK G++ EA++++
Sbjct: 233 TYTSLVHALCNLCEWKHVTTL---LNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIV 289

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
            +MI  G    V  +T L+DG      +D A  +++ MV+ G +P+V++YT+LI G+ + 
Sbjct: 290 DMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKI 349

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
                A    + +  +   PD   +N L+  L  +G   DA+ ++  ++    +PD  T+
Sbjct: 350 HKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTY 409

Query: 364 CSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
             LL ++C +        L+  +E   +  D+ VYN ++   C+AG    A  L++ +  
Sbjct: 410 SILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSS 469

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
           KG  P  +++  ++ GLC    ++EA  ++  +  N+ + +   +  I    ++     +
Sbjct: 470 KGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLR 529

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
           AIQL    +   +  DV + T+ +  L + G  + +  L
Sbjct: 530 AIQLLEEMLARGFSADVSTTTLLVEMLSDDGLDQSSCFL 568



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 75/335 (22%), Positives = 143/335 (42%), Gaps = 5/335 (1%)

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           LD A   + +++     P++V +  L+    + K +S   S    ++S G  P++   N+
Sbjct: 37  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 96

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLVCGL 386
           LI+    +     A  V   +L+L   PD  TF +L+  +C+ G+      L  K++   
Sbjct: 97  LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMI-DE 155

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
             + ++V Y  L++  CK G  + A++L  +M      PD   +  ++  LC  R++ EA
Sbjct: 156 GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEA 215

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
            N++  +V    + +   +T++V  L           L  + +  K   DVV ++  +  
Sbjct: 216 FNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDA 275

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           L + G+  EA+ +   M    V P+  TY  ++   C +  +    ++   ++      D
Sbjct: 276 LCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPD 335

Query: 567 YHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
             +   L     K H    A+    EMC    IPD
Sbjct: 336 VISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPD 370


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 118/458 (25%), Positives = 205/458 (44%), Gaps = 40/458 (8%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+ + F   L +L K+        +   M  KG  P++    IL+NCFC +G++A ++ +
Sbjct: 130 PSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSV 189

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           LG ++ LG   +    T L+ G      +  + +  +K+V  G   N V+Y +L+ G  +
Sbjct: 190 LGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCK 249

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
                 A   L M+E     PD+V +N +ID L K    ++A D Y  +    + PD  T
Sbjct: 250 IGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVIT 309

Query: 363 FCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           + +L+   CL+G+    FSLL ++     +  D+  Y  L+   CK G   +A  L   M
Sbjct: 310 YSTLICGFCLAGQLMGAFSLLNEMTLK-NINPDVYTYTILIDALCKEGKLKEAKNLLGVM 368

Query: 419 LDKGFTP---------DNYSFVG--------------------------LLRGLCGARKI 443
             +G  P         D Y  VG                          ++ GLC  + +
Sbjct: 369 TKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSV 428

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           DEA+N+ + ++  N   N   + +++D L ++GR   A+ L +       P DV++YT  
Sbjct: 429 DEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSL 488

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           + GL +    ++A  L+ +MK   + PN YTY  ++   CK   +K  ++L Q ++    
Sbjct: 489 LDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGC 548

Query: 564 ELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            +D +T   +   + K      A+    +M + G IPD
Sbjct: 549 CIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPD 586



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 115/427 (26%), Positives = 208/427 (48%), Gaps = 40/427 (9%)

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCN 194
           L   D++   GF  N  +   +++ L KIG     IK+L+     +  P+ + +N  +  
Sbjct: 222 LHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDG 281

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           LCK   V+   D    M  +G +P+V  +  L+  FC  G++  A+ LL  M     +  
Sbjct: 282 LCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPD 341

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF-MEAKMFSIAFSFL 313
           V  +T+LID   +  +L  A  L   M + G  PNVVTY++L+ G+ +  ++ +    F 
Sbjct: 342 VYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFH 401

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
            M+++E + P +  +N++I+ L K  S D+A+++   +L   +VP++             
Sbjct: 402 AMVQTEVN-PSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNT------------- 447

Query: 374 GRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
                              V YN+L+   CK+G    A+ L   +  +G   D  ++  L
Sbjct: 448 -------------------VTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSL 488

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           L GLC  + +D+AI ++  +       N + +TA++D L +  R   A +LF+  +V+  
Sbjct: 489 LDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGC 548

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS-FCKERNIKMVK 552
            +DV +Y V I GL + G  +EA  + S+M+     P+A T+ +++ S F K+ N K  +
Sbjct: 549 CIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDK-AE 607

Query: 553 RLLQDVI 559
           +LL ++I
Sbjct: 608 KLLHEMI 614



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 84/320 (26%), Positives = 157/320 (49%), Gaps = 10/320 (3%)

Query: 137 MVLEAFD---EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFN 189
           +V EA+D   EM   G  P+    + ++      G++     +L E  L    P+  ++ 
Sbjct: 287 LVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYT 346

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
           I +  LCK   +   K+++G+M ++G  PNV  +  L++ +C +G +  A Q+   M+  
Sbjct: 347 ILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQT 406

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
             + SV ++ ++I+G  + + +D A  L  +M+     PN VTY SLI G  ++   + A
Sbjct: 407 EVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSA 466

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
              +  L   G   D++ +  L+D L K  + D A+ ++  + E  + P+ YT+ +L+  
Sbjct: 467 LDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDG 526

Query: 370 VCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
           +C   R     KL   + V+    D+  YN ++   CK G  ++A+ + + M D G  PD
Sbjct: 527 LCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPD 586

Query: 427 NYSFVGLLRGLCGARKIDEA 446
             +F  ++R L    + D+A
Sbjct: 587 AVTFEIIIRSLFEKDENDKA 606



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 92/396 (23%), Positives = 163/396 (41%), Gaps = 24/396 (6%)

Query: 210 MMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLR 269
           M   KG  PN+    IL+NC   +G++A ++ +LG ++ LG   +    T L+ G  R  
Sbjct: 1   MEAAKGIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMKGETR-- 58

Query: 270 RLDMAGYLWEKMVQNGCS-PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH 328
                     +M+++  + P +   +SL         F    +F     S+  +   V H
Sbjct: 59  ----CAIKLPRMIEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDVVH 114

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV 388
                         DA+  ++G+L ++  P    F  +L ++     F     L   +EV
Sbjct: 115 --------------DAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEV 160

Query: 389 ---EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
              E DLV  + L++ FC  G    +  +   +L  G+ P+      L++GLC   ++ +
Sbjct: 161 KGIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKK 220

Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
           +++ +  +V     +N   +  +++ L + G    AI+L R         DVV Y   I 
Sbjct: 221 SLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIID 280

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
           GL +     EAY  Y++M    + P+  TY  ++  FC    +     LL ++    I  
Sbjct: 281 GLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINP 340

Query: 566 DYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           D +T   L   + K      A N L  M   G+ P+
Sbjct: 341 DVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPN 376



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 4/194 (2%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE----TQLPNFL 186
           +G+     +    EM      PNT   N ++D L K GR+   + ++KE     Q  + +
Sbjct: 424 KGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVI 483

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           ++   L  LCK  ++     +   M  +G  PN   +  L++  CK  R+  A +L   +
Sbjct: 484 TYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHI 543

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
           +  G  + V  + V+I G  +   LD A  +  KM  NGC P+ VT+  +I+   E    
Sbjct: 544 LVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDEN 603

Query: 307 SIAFSFLDMLESEG 320
             A   L  + ++G
Sbjct: 604 DKAEKLLHEMIAKG 617


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 130/551 (23%), Positives = 238/551 (43%), Gaps = 43/551 (7%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           +TGR      ++  +   GC   A ++   +  +++          FDEM + G  P+  
Sbjct: 158 ITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDIL 217

Query: 156 ARNIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
             N ++ VL K G V     L  KV+K    PN  +FNI +  LC+   +     ++  +
Sbjct: 218 TFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESI 277

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
           V +G  P+V  +  L+  FCK  ++ EA   L  M+  G   +   +  +I+GF +   +
Sbjct: 278 VSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMM 337

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
             A  +    +  G  P+  TY+SLI G       + A +       +G    ++ +N L
Sbjct: 338 QNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTL 397

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA- 390
           +  LSK G    AL +   ++E    PD +T+  +++ +C  G  S    ++     +  
Sbjct: 398 VKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGC 457

Query: 391 --DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
             D+  +N L+  +CK    ++A+++ +TML  G TPD  ++  LL GLC ARK+D  ++
Sbjct: 458 IPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVD 517

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
            ++ ++      N   +  +++   +  +  +A++LF+         D+V+    I GL 
Sbjct: 518 TFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLC 577

Query: 509 EGGRTEEAY------------------------------------ILYSQMKHIAVPPNA 532
             G  ++AY                                     L+ +M      P+ 
Sbjct: 578 SNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDN 637

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVE 592
           YTYRVM+ S+CK  NI +    L + I   +   + T  ++   +   H  S AV  +  
Sbjct: 638 YTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINL 697

Query: 593 MCNLGLIPDEM 603
           M   G++P+E+
Sbjct: 698 MVQNGIVPEEV 708



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 120/554 (21%), Positives = 236/554 (42%), Gaps = 44/554 (7%)

Query: 48  LAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIV 107
           L P  V + +      L AL  F     +  + H ++++  MI  +  L G+FE +  ++
Sbjct: 5   LQPKHVAAVIRYQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLG-LHGKFEAMEDVL 63

Query: 108 GELAR-VGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK 166
            E+ + V   +    ++  +R Y R       +  F+ M  +   P+  + N +M++L +
Sbjct: 64  AEMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVE 123

Query: 167 IGRV-----------DLGIKVLKETQLPNFLSFNIA---------LCNL----CKLNDVS 202
            G             D+GI     T      SF I          L N+    C+ N VS
Sbjct: 124 YGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVS 183

Query: 203 NVKDVIGM---------------MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
               + G                M+++G  P++  F  L++  CK G + E+ +L   ++
Sbjct: 184 YCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVM 243

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
             G   ++  + + I G  R   +D A  L E +V  G +P+V++Y +LI GF +     
Sbjct: 244 KRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLV 303

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A  +L  + + G  P+   +N +I+   K G   +A  +    +    +PD +T+ SL+
Sbjct: 304 EAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLI 363

Query: 368 STVCLSGRFS-LLPKLVCGLE--VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
           + +C  G  +  +      +E   +  +++YN L+    K G   QA++L   M++ G +
Sbjct: 364 NGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCS 423

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           PD +++  ++ GLC    + +A  +    +      +      ++D   +     KAI++
Sbjct: 424 PDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEI 483

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
               +      DV++Y   + GL +  + +     +  M      PN  TY +++ SFCK
Sbjct: 484 LDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCK 543

Query: 545 ERNIKMVKRLLQDV 558
           +R +     L +++
Sbjct: 544 DRKVSEAMELFKEM 557



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 89/404 (22%), Positives = 180/404 (44%), Gaps = 6/404 (1%)

Query: 204 VKDVIGMMVRKGFY---PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
           V++ + +  R  FY   P+V+ +  ++N   + G  ++A+++   M  +G    V   T+
Sbjct: 92  VQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTI 151

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
            +  F    R   A  L   M   GC  N V+Y ++I GF +      A+   D +  +G
Sbjct: 152 RMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQG 211

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
             PD++  N LI  L K G+  ++  ++  +++  + P+ +TF   +  +C  G      
Sbjct: 212 ICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAA 271

Query: 381 KLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
           +L+  +  E    D++ YN L+  FCK     +A    + M++ G  P+ +++  ++ G 
Sbjct: 272 RLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGF 331

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
           C A  +  A  + +  +      +   ++++++ L   G  ++A+ +F  A+ + +   +
Sbjct: 332 CKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSI 391

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
           + Y   ++GL + G   +A  L   M      P+ +TY +++   CK   +     +L D
Sbjct: 392 ILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILND 451

Query: 558 VIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            I      D  T   L     K  +   A+  L  M + G+ PD
Sbjct: 452 AIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPD 495



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/375 (21%), Positives = 156/375 (41%), Gaps = 3/375 (0%)

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
           + + G++ EA  +   M       SV ++  +++          A  ++ +M   G  P+
Sbjct: 86  YGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPD 145

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
           V T+T  +K F      + A   L+ +  +G   + V +  +I    K     +A  ++D
Sbjct: 146 VYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFD 205

Query: 350 GLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAG 406
            +L+  + PD  TF  L+  +C  G      KL   V    V  +L  +N  +   C+ G
Sbjct: 206 EMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKG 265

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
             ++A +L  +++ +G TPD  S+  L+ G C   K+ EA      +V +    N   + 
Sbjct: 266 AIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYN 325

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
            I++   +AG    A ++ R A+ + +  D  +Y+  I GL   G    A  ++ +    
Sbjct: 326 TIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEK 385

Query: 527 AVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSA 586
               +   Y  ++    K+  +    +L++D+++     D  T   +   + K    S A
Sbjct: 386 GFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDA 445

Query: 587 VNQLVEMCNLGLIPD 601
              L +    G IPD
Sbjct: 446 NGILNDAIAKGCIPD 460



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/284 (22%), Positives = 130/284 (45%), Gaps = 6/284 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D+ +++ +++ + ++ G      GI+ +    GC+    TF   +  Y +       +E 
Sbjct: 425 DIWTYNLVVNGLCKM-GCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEI 483

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGR----VDLGIKVLKETQLPNFLSFNIALCNLCK 197
            D M   G TP+    N +++ L K  +    VD    +L++   PN +++NI + + CK
Sbjct: 484 LDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCK 543

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL-LGLMITLGTSLSVN 256
              VS   ++   M  +G  P++     L+   C  G + +AY+L + +      S S  
Sbjct: 544 DRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTA 603

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
            + ++I+ F     + MA  L+ KM  + C+P+  TY  +I  + +     +A +FL   
Sbjct: 604 IFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLEN 663

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
            S+G  P       +++CL       +A+ + + +++  +VP+ 
Sbjct: 664 ISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEE 707


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 122/510 (23%), Positives = 226/510 (44%), Gaps = 20/510 (3%)

Query: 104 RGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDV 163
           + +  +  ++G  I   +F + +        +G  +    +M  +G  P+    N ++D 
Sbjct: 182 KAVFTDFIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDG 241

Query: 164 LFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN 219
           L K GR+    DL + +  +   PN  +FNI +   C+L  +    +VI +M +    P+
Sbjct: 242 LCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPD 301

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
              + ++++ FCK GRIAEA +L   M  L  S  V  +  LI+G       +    L E
Sbjct: 302 AWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIE 361

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
           +M   G  PN VTY  ++K F++          +  +E  G  PD+V +N LI    K+G
Sbjct: 362 EMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVG 421

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYN 396
             D+A  + D +    L  D  T  ++L  +C   +      L+C         D V Y 
Sbjct: 422 KMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYG 481

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            L+  + K    +QA++L++ M +K   P   ++  ++ GLC   K ++AI+    ++ +
Sbjct: 482 TLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLES 541

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
               +   +  I+    + G+  KA Q   + + + +  DVV+    + GL + G  E+A
Sbjct: 542 GLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKA 601

Query: 517 YILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL--- 573
             L++         +A +Y  ++LS CKE+       LL+++ + ++  D +T   +   
Sbjct: 602 LKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGG 661

Query: 574 ----------TKFIFKFHSSSSAVNQLVEM 593
                      +FI K      + NQ +E+
Sbjct: 662 LTDAGRMKDAEEFISKIAEKGKSENQFLEL 691



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 116/483 (24%), Positives = 217/483 (44%), Gaps = 22/483 (4%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           K +  F +  +F+ ++    RL G  +    ++  +++   V  A T+ + +  + +   
Sbjct: 259 KNKGLFPNRTTFNILVVGCCRL-GWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGR 317

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNI 190
               +   +EM     +P+    N +++  F+ G  + G K+++E +     PN +++N+
Sbjct: 318 IAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNV 377

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +    K   +  V   +  M   G  P++  +  L++  CK+G++ EA++L+  M   G
Sbjct: 378 MVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKG 437

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
             +       ++    R R+LD A  L     + G   + V+Y +LI G+ + +  S A 
Sbjct: 438 LKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQAL 497

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
              D ++ +   P ++ +N +I  L +MG  + A+D  D LLE  LVPD  T+ +++   
Sbjct: 498 RLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGY 557

Query: 371 CLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
           C  G+    F    K+V     + D+V  N LL   CK G   +A+KL+NT + KG   D
Sbjct: 558 CQEGQVEKAFQFHNKMV-EKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVD 616

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
             S+  ++  LC  ++  EA ++ + +       + + + AI+  L +AGR   A + F 
Sbjct: 617 AVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDA-EEFI 675

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
             I EK   +     +  R   +  RT E      Q  H    PNA  Y   +   C + 
Sbjct: 676 SKIAEKGKSENQFLELGKR---QDARTSE----IPQEPH----PNAIAYSNKINELCSQG 724

Query: 547 NIK 549
             K
Sbjct: 725 RYK 727



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/444 (23%), Positives = 198/444 (44%), Gaps = 24/444 (5%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGR--------------VDLGIKVLKETQLPNF 185
           + F+ M R G  P     N +++ L +                 + +G+K+       N 
Sbjct: 145 QIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKI-------NT 197

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGL 245
            SFNI +   C  N       V+G M   G  P+   +  +L+  CK GR+ EA  LL  
Sbjct: 198 NSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLD 257

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           M   G   +   + +L+ G  RL  L  A  + E M QN   P+  TY  +I GF +   
Sbjct: 258 MKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGR 317

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
            + A    + +E+   +PD+V +N LI+   + GS ++   + + +    + P+S T+  
Sbjct: 318 IAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNV 377

Query: 366 LLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
           ++      G+   + K V  +E      D+V YN L+S+ CK G  ++A +L + M  KG
Sbjct: 378 MVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKG 437

Query: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI 482
              D+ +   +LR LC  RK+DEA ++          V+   +  ++    +  +  +A+
Sbjct: 438 LKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQAL 497

Query: 483 QLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
           +L+     ++    +++Y   I GL + G+T +A     ++    + P+  TY  ++  +
Sbjct: 498 RLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGY 557

Query: 543 CKERNIKMVKRLLQDVIDARIELD 566
           C+E  ++   +    +++   + D
Sbjct: 558 CQEGQVEKAFQFHNKMVEKNFKPD 581



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/301 (24%), Positives = 135/301 (44%), Gaps = 6/301 (1%)

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD---ALDVYDGLLELKLVPDSYTFCS 365
           A    + ++  G  P L+  N L++ L +  S      +  V+   +++ +  ++ +F  
Sbjct: 143 AAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINTNSFNI 202

Query: 366 LLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
           L+   C+  RF    +++  +       D + YN +L   CK G  N+A  L   M +KG
Sbjct: 203 LIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKG 262

Query: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI 482
             P+  +F  L+ G C    + EA NV + +  N+   +A  +  ++    + GR  +A+
Sbjct: 263 LFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAM 322

Query: 483 QLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
           +L       K   DVV+Y   I G  E G +EE + L  +M+   + PN+ TY VM+  F
Sbjct: 323 RLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWF 382

Query: 543 CKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
            K+  +  V + ++ + ++    D  T   L  +  K      A   + EM   GL  D+
Sbjct: 383 VKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDD 442

Query: 603 M 603
           +
Sbjct: 443 V 443



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/238 (21%), Positives = 90/238 (37%), Gaps = 38/238 (15%)

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTP------------------------------------ 425
           +   G P+QA +++N M   G  P                                    
Sbjct: 134 YVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGV 193

Query: 426 --DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
             +  SF  L+ G C   +  EAI V   +       +   +  I+D L + GR ++A  
Sbjct: 194 KINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARD 253

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           L      +    +  ++ + + G    G  +EA  +   M   +V P+A+TY VM+  FC
Sbjct: 254 LLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFC 313

Query: 544 KERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           K+  I    RL +++ + ++  D  T   L    F+  SS      + EM   G+ P+
Sbjct: 314 KQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPN 371


>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
 gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
          Length = 757

 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 125/502 (24%), Positives = 216/502 (43%), Gaps = 45/502 (8%)

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK-------ETQLPNFLSFNIALCNLCK 197
           M  FG TP+ F+ +I++       R +  +++L         +  PN +++   +  LCK
Sbjct: 155 MPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCK 214

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              V   K V   M+ KG  PN   +  L++ +  +G+  E  Q+L  M T G       
Sbjct: 215 AQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYI 274

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           + VL+D   +  R   A  +++ +++ G  PNV  Y  L+ G+      S   SFLD++ 
Sbjct: 275 YAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMV 334

Query: 318 SEGHAPD-----------------------------------LVFHNVLIDCLSKMGSYD 342
             G +PD                                   +V +  LID L K+G  D
Sbjct: 335 GNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVD 394

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALL 399
           DA+  ++ +++  + PD + F SL+  +C   ++    +L   V    +  D V +N L+
Sbjct: 395 DAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLM 454

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
              C+ G   +A +L + ML  G  PD  S+  L+ G C   +IDEA  +   IV     
Sbjct: 455 CNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLK 514

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            +   +  ++    +A R   A  LFR  +++    DVV+Y   + GL + GR  EA  L
Sbjct: 515 PDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKEL 574

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK 579
           Y  M +     N YTY +++   CK   +    ++   +    ++LD  T+  +   + K
Sbjct: 575 YLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLK 634

Query: 580 FHSSSSAVNQLVEMCNLGLIPD 601
                 A++    +   GL+PD
Sbjct: 635 GGRKEDAMDLFATISAYGLVPD 656



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/463 (24%), Positives = 212/463 (45%), Gaps = 7/463 (1%)

Query: 101 ETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIV 160
           +  +G+   +   G      T+   +  Y     +  V++   EM   G  P+ +   ++
Sbjct: 219 DRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVL 278

Query: 161 MDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
           +D L K GR     ++   V+++   PN   + I L        +S +   + +MV  G 
Sbjct: 279 LDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGV 338

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
            P+  +F I+   + K   I EA  +   M     S ++  +  LID   +L R+D A  
Sbjct: 339 SPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVL 398

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
            + +M+  G +P++  ++SL+ G      +  A      +  +G   D VF N L+  L 
Sbjct: 399 KFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLC 458

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLV 393
           + G   +A  + D +L + + PD  ++ +L+   CL+GR     KL   +  + ++ D V
Sbjct: 459 REGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKV 518

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            YN LL  +CKA   + A  L+  ML KG TPD  ++  +L GL    +  EA  +Y  +
Sbjct: 519 TYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSM 578

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
           + +   +N + +  I++ L +     +A ++F     +   LD+ +  + I  LL+GGR 
Sbjct: 579 INSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRK 638

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
           E+A  L++ +    + P+  TY ++  +  KE +++ +  L  
Sbjct: 639 EDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFS 681



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/357 (23%), Positives = 175/357 (49%), Gaps = 8/357 (2%)

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA-WTVLIDGFRRLRRLDMA-G 275
           P+   + IL+ CFC+MGR+   +   GL++  G  ++    ++ L+ G    +R+D A  
Sbjct: 90  PSSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATD 149

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG---HAPDLVFHNVLI 332
            L  +M + GC+P+V +Y+ L+KGF   K    A   L M+  +G   H P++V +  +I
Sbjct: 150 ILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVI 209

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VE 389
           D L K    D A  V+  +++  + P+++T+  L+      G++  + +++  +    ++
Sbjct: 210 DGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQ 269

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            D  +Y  LL Y CK G   +A  ++++++ KG  P+   +  LL G      + E  + 
Sbjct: 270 PDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSF 329

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
              +V N  + + H+   +     +     +A+ +F +   ++   ++V+Y   I  L +
Sbjct: 330 LDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCK 389

Query: 510 GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
            GR ++A + ++QM    + P+ + +  ++   C     +  + L  +V+D  I LD
Sbjct: 390 LGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLD 446



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/384 (22%), Positives = 183/384 (47%), Gaps = 9/384 (2%)

Query: 129 YWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPN 184
           Y +  M    +  FD+M +   +PN      ++D L K+GRVD  +    +++ E   P+
Sbjct: 352 YAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPD 411

Query: 185 FLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLG 244
              F+  +  LC ++     +++   ++ +G   +   F  L+   C+ GR+ EA +L+ 
Sbjct: 412 IFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLID 471

Query: 245 LMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
           LM+ +G    V ++  L+DG     R+D A  L + +V  G  P+ VTY +L+ G+ +A+
Sbjct: 472 LMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKAR 531

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
               A+S    +  +G  PD+V +N ++  L + G + +A ++Y  ++  +   + YT+ 
Sbjct: 532 RIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYN 591

Query: 365 SLLSTVC----LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
            +++ +C    +   F +   L C  +++ D+   N ++    K G    A+ L+ T+  
Sbjct: 592 IIINGLCKNNFVDEAFKMFHSL-CSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISA 650

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
            G  PD  ++  +   L     ++E   ++  +  N  A N+ +  A+V  L+  G  ++
Sbjct: 651 YGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINR 710

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAI 504
           A     +   + + L+  + ++ I
Sbjct: 711 AGAYLSKLDEKNFSLEASTTSMLI 734



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 102/445 (22%), Positives = 188/445 (42%), Gaps = 46/445 (10%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
            GR    R I   + R G       + + L  Y        +    D M   G +P+   
Sbjct: 285 NGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHI 344

Query: 157 RNIVMDVLFKIGRVDLGIKV---LKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            NI+     K   +D  + +   +++ +L PN +++   +  LCKL  V +       M+
Sbjct: 345 FNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMI 404

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
            +G  P++ +F  L+   C + +  +A +L   ++  G  L    +  L+    R  R+ 
Sbjct: 405 DEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVM 464

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A  L + M++ G  P+V++Y +L+ G         A   LD++ S G  PD V +N L+
Sbjct: 465 EAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLL 524

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVE 389
               K    DDA  ++  +L   L PD  T+ ++L  +  +GRFS   +L   +     +
Sbjct: 525 HGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQ 584

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            ++  YN +++  CK  F ++A K+++++  K                      D  +++
Sbjct: 585 MNIYTYNIIINGLCKNNFVDEAFKMFHSLCSK----------------------DLQLDI 622

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL--DVVSYTVAIRGL 507
           +   +M             +  L++ GR   A+ LF  A +  Y L  DV +Y +    L
Sbjct: 623 FTANIM-------------IGALLKGGRKEDAMDLF--ATISAYGLVPDVETYCLIAENL 667

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNA 532
           ++ G  EE   L+S M+     PN+
Sbjct: 668 IKEGSLEELDELFSAMEENGTAPNS 692



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 103/224 (45%), Gaps = 18/224 (8%)

Query: 354 LKLVPDSYTFCSLLSTVCLSGR-------FSLLPKLVCGLEVEADLVVYNALLSYFCKAG 406
           +K+ P S+T+  L+   C  GR       F L+ K   G  V  D V+++ LL   C A 
Sbjct: 86  IKVAPSSFTYTILIGCFCRMGRLKHGFAAFGLILK--TGWRVN-DTVIFSQLLKGLCDAK 142

Query: 407 FPNQAVK-LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAH-- 463
             ++A   L   M + G TPD +S+  LL+G C  ++ +EA+ +    +M +    +H  
Sbjct: 143 RVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLS--MMADDGDGSHTP 200

Query: 464 ---VHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
               +T ++D L +A    +A  +F+  I +    +  +YT  I G L  G+ +E   + 
Sbjct: 201 NVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQML 260

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
            +M    + P+ Y Y V+L   CK       + +   VI   I+
Sbjct: 261 QEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIK 304



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 103/273 (37%), Gaps = 47/273 (17%)

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTV----CLSGR---FSLLPKLV--CGLEVEADL 392
           +DAL ++D +L          F  LL+ V    C S      SL  +++  C ++V    
Sbjct: 33  NDALKLFDEMLTHARPASVRAFNQLLTAVSRARCSSASELVVSLFNRMIRECSIKVAPSS 92

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGF-TPDNYSFVGLLRGLCGARKIDEAINVYQ 451
             Y  L+  FC+ G        +  +L  G+   D   F  LL+GLC A+++DEA ++  
Sbjct: 93  FTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDI-- 150

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
                                           L RR        DV SY++ ++G     
Sbjct: 151 --------------------------------LLRRMPEFGCTPDVFSYSILLKGFCNEK 178

Query: 512 RTEEAYILYSQMKHI---AVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
           R EEA  L S M      +  PN  TY  ++   CK + +   K + Q +ID  +  + H
Sbjct: 179 RAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNH 238

Query: 569 TSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           T   L             V  L EM   GL PD
Sbjct: 239 TYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPD 271



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/272 (20%), Positives = 108/272 (39%), Gaps = 14/272 (5%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           LTGR +    ++  +  +G      T+   L  Y +          F EM   G TP+  
Sbjct: 494 LTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVV 553

Query: 156 ARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
             N ++  LF+ GR     +L + ++      N  ++NI +  LCK N V     +   +
Sbjct: 554 TYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSL 613

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
             K    ++    I++    K GR  +A  L   +   G    V  + ++ +   +   L
Sbjct: 614 CSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSL 673

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           +    L+  M +NG +PN     +L++  +     + A ++L  L+ +  + +    ++L
Sbjct: 674 EELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNFSLEASTTSML 733

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
           I   S+ G Y             K +P+ Y F
Sbjct: 734 ISIYSR-GEYQQL---------AKSLPEKYHF 755


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 90/355 (25%), Positives = 176/355 (49%), Gaps = 5/355 (1%)

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M  KGF P+V  +  +++  CK G++ EA +++  M   G +  V  +T+++D   R  +
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           +D A  L+ KM++ GCS N V Y +LI G  + +    A+  L+ + S+G+ PD + +N 
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL-----VCG 385
           ++  L +MG   +A   +D +      PD   +  LL  +   G+ +    L     +  
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180

Query: 386 LEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
            +V  DL+ YN L+  FC+    ++A+KL+  ++ KG+ PD  ++  +L GL     +DE
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240

Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
           A  +++ +V +  A N   ++ ++      G   + ++L+     +++  DV+     I 
Sbjct: 241 AEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVID 300

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
            L +  + ++A+ +  +M  I   P+  TY ++L   CK   +     L   ++D
Sbjct: 301 MLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVD 355



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 131/562 (23%), Positives = 236/562 (41%), Gaps = 82/562 (14%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
           ++ +  DV ++  +IS + + TG+      +V E+   G      T+ + +    R    
Sbjct: 3   EKGFEPDVVTYSTIISGLCK-TGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKV 61

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIA 191
               E F +M   G + NT A N +++ L K   ++   K+L+E       P+ +++N  
Sbjct: 62  DEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTI 121

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           L  LC++  VS  K     M  +G+ P+V  +  LL+   K G++AEA+ L   M     
Sbjct: 122 LSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADR 181

Query: 252 SLSVN--AWTVLIDGFRRLRRLDMA----------GYL---------------------- 277
            ++ +   +  LIDGF R+ + D A          GY+                      
Sbjct: 182 KVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEA 241

Query: 278 ---WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
              ++KMV +GC+PN  TY+ ++ G       +      + +  +  +PD++  N +ID 
Sbjct: 242 EEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDM 301

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-------FSLLPKLVCGLE 387
           L K    DDA  V + + ++  VPD  T+  LL  +C +         FS +    C  +
Sbjct: 302 LCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPD 361

Query: 388 VEA-------------------------------DLVVYNALLSYFCKAGFPNQAVKLYN 416
           + +                               D+V +N L+   CKAG  ++A  L +
Sbjct: 362 IVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLD 421

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
            M +    PD  +   L+ GLC  ++ DEA+ ++Q +V      +   H  ++  L   G
Sbjct: 422 VMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREG 481

Query: 477 RCHKAIQLFRRAIVE--KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
           +  +A+  F+  +    ++  DVV+YT  +  L+E GR ++A   + QM      P+   
Sbjct: 482 KLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVA 541

Query: 535 YRVMLLSFCKERNIKMVKRLLQ 556
           Y  ++    K+       RL Q
Sbjct: 542 YNTLMNGLRKQGRHIQADRLTQ 563



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 111/459 (24%), Positives = 203/459 (44%), Gaps = 40/459 (8%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+ ++++  +  LCK   V+   +++  M  KG  P+V  + I+++  C+ G++ EA +L
Sbjct: 8   PDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADEL 67

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
              MI  G S +  A+  LI+G  +   ++ A  L E+M   G  P+ +TY +++ G   
Sbjct: 68  FHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCR 127

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD--GLLELKLVPDS 360
               S A  F D + S G++PD+V +N L+D L K G   +A  ++    + + K+ PD 
Sbjct: 128 MGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDL 187

Query: 361 YTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALL------------------ 399
            T+ +L+   C   +     KL   V       D V YN++L                  
Sbjct: 188 ITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKK 247

Query: 400 -----------------SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
                            S  C+ G   + ++LY  M +K F+PD      ++  LC A+K
Sbjct: 248 MVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKK 307

Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTV 502
           +D+A  V + +       +   +  ++D L +     KA +LF   +      D+VSY+V
Sbjct: 308 VDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSV 367

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
            + GL +  +  +A +L+ +M    + P+  T+ +++   CK   +   K LL  + +  
Sbjct: 368 VLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHN 427

Query: 563 IELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           +  D  T   L   + +   +  AV     M   G + D
Sbjct: 428 VLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVAD 466



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 214/453 (47%), Gaps = 31/453 (6%)

Query: 102 TVRGIVGELARVGCVIKAQTFLLFLRIYWRG-------------EMY--GMVLEAFD--- 143
           T   I+  L R+G V +A+ F  F  +  RG              +Y  G V EA+    
Sbjct: 117 TYNTILSGLCRMGKVSEAKQF--FDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFK 174

Query: 144 --EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET----QLPNFLSFNIALCNLCK 197
             +M      P+    N ++D   ++ + D  +K+ K+      +P+ +++N  L  L +
Sbjct: 175 TMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLAR 234

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            +++   +++   MV  G  PN   + I+L+  C++G +A   +L   M     S  V  
Sbjct: 235 KSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLL 294

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
              +ID   + +++D A  + E+M + G  P+VVTY  L+ G  +  +   A      + 
Sbjct: 295 CNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMV 354

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G APD+V ++V+++ L K     DA  ++D ++E KLVPD  TF  L+  +C +G+  
Sbjct: 355 DNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLD 414

Query: 378 LLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
               L+  +    V  D V    L+   C+    ++AV+L+  M++KG   D      +L
Sbjct: 415 EAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVL 474

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHV--HTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
            GLC   K+ +A+  ++ +V ++   +  V  +T +V+ LIEAGR  +A+  F++     
Sbjct: 475 AGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSG 534

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKH 525
              D V+Y   + GL + GR  +A  L   MK 
Sbjct: 535 CAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKE 567



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 93/359 (25%), Positives = 167/359 (46%), Gaps = 10/359 (2%)

Query: 77  RDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYG 136
           + Y  D  +++ ++  + R +   +    +  ++   GC     T+ + L  + R     
Sbjct: 216 KGYMPDTVTYNSILLGLARKS-NMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMA 274

Query: 137 MVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIAL 192
             LE ++EM    F+P+    N V+D+L K  +VD   KVL+E      +P+ +++NI L
Sbjct: 275 RCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILL 334

Query: 193 CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
             LCK N V    ++   MV  G  P++  + ++LN  CK  ++ +A  L   MI     
Sbjct: 335 DGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLV 394

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
             V  + +L+DG  +  +LD A  L + M ++   P+ VT T+L+ G    K    A   
Sbjct: 395 PDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRL 454

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL--KLVPDSYTFCSLLSTV 370
              +  +G   D++ HN+++  L + G    AL  +  +++   +  PD  T+ +L++ +
Sbjct: 455 FQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNAL 514

Query: 371 CLSGRFSLLP---KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
             +GR        + + G     D V YN L++   K G   QA +L   M +KGF  D
Sbjct: 515 IEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 573



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/331 (23%), Positives = 150/331 (45%), Gaps = 14/331 (4%)

Query: 37  CATTHQDFPIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRL 96
           CA     + I+L+ H     +  C      L  +    ++R +  DV   + +I ++ + 
Sbjct: 253 CAPNGATYSIVLSGHCRVGNMARC------LELYEEMTEKR-FSPDVLLCNAVIDMLCK- 304

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
             + +    ++ E++++G V    T+ + L    +  +     E F  M   G  P+  +
Sbjct: 305 AKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVS 364

Query: 157 RNIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            ++V++ L K  +V     L  ++++   +P+ ++FNI +  LCK   +   KD++ +M 
Sbjct: 365 YSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMS 424

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
                P+      L++  C+  R  EA +L   M+  GT   V    +++ G  R  +L 
Sbjct: 425 EHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLA 484

Query: 273 MAGYLWEKMVQNGC--SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
            A   ++ MV++    SP+VVTYT+L+   +EA     A  +   +   G APD V +N 
Sbjct: 485 QALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNT 544

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           L++ L K G +  A  +   + E   + D +
Sbjct: 545 LMNGLRKQGRHIQADRLTQAMKEKGFLSDCF 575


>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
 gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
          Length = 684

 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 130/548 (23%), Positives = 252/548 (45%), Gaps = 54/548 (9%)

Query: 136 GMVLEAFDEMGR-FGFTPNTFARNIVMDVLFKIGRVD-------LGIKVLKETQLPNFLS 187
           G  L   D+M R F  TP+  + N V+  L    R D       L  ++L++   P   +
Sbjct: 126 GRALHLLDQMPRRFAVTPSFRSYNAVLSTL---ARADCHADALLLYRRMLRDRVPPTTFT 182

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           F +A   LC+L    +   ++  M R G  P+  +++ +++     G +AEA  LL  M+
Sbjct: 183 FGVAARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEML 242

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
            +G +  VN +  ++ G   L  +  A  L ++M+ +GC+P+VVTY  L++G    +   
Sbjct: 243 LMGCAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQAD 302

Query: 308 IAFSFL-------------------------------DMLESEGHAPDLVFHNVLIDCLS 336
            A++ L                               +M+ S+G  PD+  +N+L+  L 
Sbjct: 303 EAYAMLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLC 362

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLV 393
           K+G    A+ + D + E    P+  T+ +LL + C +G +     ++  +  +    +  
Sbjct: 363 KLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQ 422

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            YN ++    K G  ++A++L   M  +G  PD  ++  ++  LC   ++DEA +++  +
Sbjct: 423 GYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNL 482

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
           +      N   +  ++  L+ +GR  + ++L    ++   PLDVVSY   I+ L + G  
Sbjct: 483 LEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNV 542

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
           + + +L  +M    + PN ++Y +++   CK   ++    L +++++  +  D  T   L
Sbjct: 543 DRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTL 602

Query: 574 TKFIFKFHSSSSAVNQLVEMCNLGLIPDEM-------WR-KLGLLSDETM-TPVSLFDGF 624
              + K   + +A+N L ++ N  + PD +       W  K+ LL D +M    ++  G 
Sbjct: 603 INGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGI 662

Query: 625 VPCERRAG 632
           VP ER  G
Sbjct: 663 VPNERTWG 670



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 125/553 (22%), Positives = 230/553 (41%), Gaps = 98/553 (17%)

Query: 88  HMISVVTR---LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM------YGMV 138
           H++  + R   +T  F +   ++  LAR  C   A   LL+ R+  R  +      +G+ 
Sbjct: 130 HLLDQMPRRFAVTPSFRSYNAVLSTLARADC--HADALLLYRRML-RDRVPPTTFTFGVA 186

Query: 139 LEAFDEMGR-------------FGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL--- 182
             A   +GR              G  P+      V+  L   G V     +L E  L   
Sbjct: 187 ARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGC 246

Query: 183 -PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
             +  +FN  +  LC L  V     ++  M+  G  P+V  +  LL   C+  +  EAY 
Sbjct: 247 AADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYA 306

Query: 242 LLG-------------------------------LMITLGTSLSVNAWTVLIDGFRRLRR 270
           +LG                               +M + G    V+ + +L+ G  +L R
Sbjct: 307 MLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGR 366

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGF---------------MEAKMFSI------- 308
              A  + ++M + GC+PN+VTY++L+  F               M AK FS+       
Sbjct: 367 CGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNG 426

Query: 309 -------------AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
                        A   +  ++S+G  PD+  +N +I  L      D+A  ++  LLE  
Sbjct: 427 IIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEG 486

Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAV 412
           +V +  T+ +L+  +  SGR+    +L   + +     D+V YN L+   CK G  ++++
Sbjct: 487 VVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSM 546

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
            L   M+ KG  P+N+S+  L+  LC A K+ +A+ + + ++      +   +  +++ L
Sbjct: 547 MLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGL 606

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
            + G  H A+ L  +   E    D+V+Y + I    +    ++A +L  +     + PN 
Sbjct: 607 CKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNE 666

Query: 533 YTYRVMLLSFCKE 545
            T+ +M+ +F ++
Sbjct: 667 RTWGMMVQNFVRQ 679


>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 892

 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 141/589 (23%), Positives = 252/589 (42%), Gaps = 55/589 (9%)

Query: 48  LAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIV 107
           L P ++ S     P  L AL+FF W  +  ++ H + +   ++ ++ R          + 
Sbjct: 51  LTPSLLCSLFNLNPDPLTALNFFRWIRRHHNFPHSLATHHSLLLLLVR-HRTLRAAENVR 109

Query: 108 GELARVGCVIKAQTFLLFL----------------------------------RIYWRGE 133
             + +        TFLL L                                  R     E
Sbjct: 110 NSMIKSCTSPHDATFLLNLLRRMNTAAAAADHQHQLAFKLSLTSYNRLLMCLSRFSMVDE 169

Query: 134 MYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG----IKVLKETQLPNFLSFN 189
           M  +  E   + G   F PN    N +++   K+G + +     +++L+    P+  ++ 
Sbjct: 170 MISLYKEMLTDNGNSVF-PNLITLNTMLNSYCKLGNMAVARLFFVRILRCEPGPDLFTYT 228

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
             +   C+ +DV     V  +M R+    N   +  L++  C+ G++ EA +    M   
Sbjct: 229 SLVLGYCRNDDVERACGVFCVMPRR----NAVSYTNLIHGLCEAGKLHEALEFWARMRED 284

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           G   +V  +TVL+       R   A  L+ +M + GC PNV TYT LI    +      A
Sbjct: 285 GCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEA 344

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV-PDSYTFCSLLS 368
              L+ +  +G AP +V  N LI    K G  +DA+ V  GL+E K V P+  T+  L+ 
Sbjct: 345 LKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVL-GLMESKKVCPNVRTYNELIC 403

Query: 369 TVC----LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
             C    +    +LL K+V   ++  D+V YN L+   C+ G  + A +L+  M+  GF+
Sbjct: 404 GFCRGKSMDRAMALLNKMVES-KLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFS 462

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           PD ++F   +  LC   ++ EA  + + +   +   N H +TA++D   +AG+   A  L
Sbjct: 463 PDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASL 522

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
           F+R + E+   + +++ V I GL + G+ ++A +L   M    V P  +TY +++    K
Sbjct: 523 FKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLK 582

Query: 545 ERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEM 593
           E +      +L  +I +     Y  ++       K + S   + +  EM
Sbjct: 583 EYDFDRANEILNRLISS----GYQPNVVTYTAFIKAYCSQGRLEEAEEM 627



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 131/571 (22%), Positives = 238/571 (41%), Gaps = 75/571 (13%)

Query: 60  CPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKA 119
           C +D +  +  ++C   R    +  S+ ++I  +    G+          +   GC    
Sbjct: 235 CRNDDVERACGVFCVMPR---RNAVSYTNLIHGLCE-AGKLHEALEFWARMREDGCFPTV 290

Query: 120 QTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE 179
           +T+ + +            L  F EM   G  PN +   +++D L K GR+D  +K+L E
Sbjct: 291 RTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNE 350

Query: 180 TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEA 239
                                          MV KG  P+V  F  L+  +CK G + +A
Sbjct: 351 -------------------------------MVEKGVAPSVVPFNALIGSYCKRGMMEDA 379

Query: 240 YQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG 299
             +LGLM +     +V  +  LI GF R + +D A  L  KMV++  SP+VVTY +LI G
Sbjct: 380 VGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHG 439

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
             E  +   A     ++  +G +PD    N  + CL +MG   +A  + + L E  +  +
Sbjct: 440 LCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKAN 499

Query: 360 SYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
            +                                 Y AL+  +CKAG    A  L+  ML
Sbjct: 500 EH--------------------------------AYTALIDGYCKAGKIEHAASLFKRML 527

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
            +   P++ +F  ++ GL    K+ +A+ + + +   +     H +  +V+ +++     
Sbjct: 528 AEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFD 587

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
           +A ++  R I   Y  +VV+YT  I+     GR EEA  +  ++K+  V  +++ Y +++
Sbjct: 588 RANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLI 647

Query: 540 LSFCKERNIKMVKRLLQDVIDARIELDYHT-SIRLTKFIFKFH--SSSSAVNQLVEMCNL 596
            ++     +     +L+ +     E  Y T SI +   + + H    S+ V   V + N+
Sbjct: 648 NAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNI 707

Query: 597 GLIPDEMWRKLGLLSDETMTPVSLFDGFVPC 627
            +   ++W K+    D  +T V LF+    C
Sbjct: 708 SVDNTDIWSKI----DFGITTV-LFEKMAEC 733



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 90/420 (21%), Positives = 180/420 (42%), Gaps = 9/420 (2%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL---KETQL-PNFLSFNIALCNLCK 197
           F  M R GF+P+ +  N  M  L ++GRV    ++L   KE  +  N  ++   +   CK
Sbjct: 453 FRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCK 512

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              + +   +   M+ +   PN   F ++++   K G++ +A  L+  M       +++ 
Sbjct: 513 AGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHT 572

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           + +L++   +    D A  +  +++ +G  PNVVTYT+ IK +        A   +  ++
Sbjct: 573 YNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIK 632

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
           +EG   D   +N+LI+    MG  D A  V   +      P   T+  L+  + +     
Sbjct: 633 NEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKK 692

Query: 378 LLPKLVCGLEVE-ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
                V GL+V   ++ V N     + K  F    V L+  M + G  P+  ++  L+ G
Sbjct: 693 EGSNPV-GLDVSLTNISVDNT--DIWSKIDFGITTV-LFEKMAECGCVPNLNTYSKLING 748

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
           LC   +++ A ++Y  +     + +  +H +++    + G   +A+ L    +   +   
Sbjct: 749 LCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAH 808

Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
           + SY + I GL E    E+A  ++  +       +   ++V++    K   +     LL 
Sbjct: 809 LESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLN 868



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 154/347 (44%), Gaps = 19/347 (5%)

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS-FLDMLESEGHA--PD 324
           LRR++ A    +   Q     ++ +Y  L+       M     S + +ML   G++  P+
Sbjct: 129 LRRMNTAAAAADHQHQLAFKLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPN 188

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS-------GRFS 377
           L+  N +++   K+G+   A   +  +L  +  PD +T+ SL+   C +       G F 
Sbjct: 189 LITLNTMLNSYCKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFC 248

Query: 378 LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
           ++P+         + V Y  L+   C+AG  ++A++ +  M + G  P   ++  L+  L
Sbjct: 249 VMPR--------RNAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCAL 300

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
           C + +  EA++++  +       N + +T ++D L + GR  +A+++    + +     V
Sbjct: 301 CESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSV 360

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
           V +   I    + G  E+A  +   M+   V PN  TY  ++  FC+ +++     LL  
Sbjct: 361 VPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNK 420

Query: 558 VIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMW 604
           ++++++  D  T   L   + +     SA      M   G  PD+ W
Sbjct: 421 MVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQ-W 466



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 90/431 (20%), Positives = 163/431 (37%), Gaps = 79/431 (18%)

Query: 77  RDYFH-DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
           RD F  D  +F+  +  + R+ GR      I+  L           +   +  Y +    
Sbjct: 458 RDGFSPDQWTFNAFMVCLCRM-GRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKI 516

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIA 191
                 F  M      PN+   N+++D L K G+V   + ++++       P   ++NI 
Sbjct: 517 EHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNIL 576

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAE------------- 238
           +  + K  D     +++  ++  G+ PNV  +   +  +C  GR+ E             
Sbjct: 577 VEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGV 636

Query: 239 ------------AYQLLGLMIT--------LGTS-------------------------- 252
                       AY  +GL+ +         GT                           
Sbjct: 637 LLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSN 696

Query: 253 ---LSVNAWTVLIDGFRRLRRLD--MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
              L V+   + +D      ++D  +   L+EKM + GC PN+ TY+ LI G  +    +
Sbjct: 697 PVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLN 756

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP--DSYTF-- 363
           +AFS    +   G +P  + HN L+    K+G + +A+ + D ++E   +   +SY    
Sbjct: 757 VAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLI 816

Query: 364 CSLLSTVCLSGRFSLLPKLV-CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
           C L   +      ++   L+ CG     D V +  L+    K G+ +Q  +L N M   G
Sbjct: 817 CGLFEQMNKEKAEAVFCSLLRCGYNY--DEVAWKVLIDGLAKTGYVDQCSELLNLMEKNG 874

Query: 423 --FTPDNYSFV 431
               P+ YS +
Sbjct: 875 CRLHPETYSML 885



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/178 (21%), Positives = 80/178 (44%), Gaps = 4/178 (2%)

Query: 130 WRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV---LKETQL-PNF 185
           W    +G+    F++M   G  PN    + +++ L K+GR+++   +   ++E  + P+ 
Sbjct: 715 WSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSE 774

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGL 245
           +  N  L + CKL        ++  M+      ++  +++L+    +     +A  +   
Sbjct: 775 IIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCS 834

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
           ++  G +    AW VLIDG  +   +D    L   M +NGC  +  TY+ L++    A
Sbjct: 835 LLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLMQELNRA 892


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 118/468 (25%), Positives = 226/468 (48%), Gaps = 25/468 (5%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ---LP-NFLSFNIALCNLCK 197
           F EM +    P+    + ++  + K+ + D+ I + ++ Q   +P N  +++I +   C+
Sbjct: 69  FGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCR 128

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            + +     V+G M++ G+ PN+     LLN +C   RI+EA  L+  M   G   +   
Sbjct: 129 RSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVT 188

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  LI G     +   A  L ++MV  GC P++VTY  ++ G  +     +AF+ L+ +E
Sbjct: 189 FNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME 248

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
                P ++ +N +ID L K    DDAL+++  +    + P+  T+ SL+S +C  GR+S
Sbjct: 249 QGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWS 308

Query: 378 LLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
              +L+  +   ++  D+  ++AL+  F K G   +A KLY+ M+ +   P   ++  L+
Sbjct: 309 DASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLI 368

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            G C   ++DEA  +++ +V  +   +   +  ++    +  R  + +++FR        
Sbjct: 369 NGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 428

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
            + V+Y + I+GL + G  + A  ++ +M    VPPN  TY  +L   CK  N K+ K  
Sbjct: 429 GNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK--NGKLEK-- 484

Query: 555 LQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVE-MCNLGLIPD 601
                 A +  +Y    ++   I+ +       N ++E MC  G + D
Sbjct: 485 ------AMVVFEYLQRSKMEPTIYTY-------NIMIEGMCKAGKVED 519



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/513 (22%), Positives = 236/513 (46%), Gaps = 17/513 (3%)

Query: 49  APHIVHSTLL---NCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTG--RFETV 103
           A   VH +L+   N  +   + SFF W    R  F    S+D+   +        + +  
Sbjct: 11  AKRFVHRSLVVRGNAATVSPSFSFF-W----RRAFSGKTSYDYREKLSRNGLSELKLDDA 65

Query: 104 RGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDV 163
             + GE+ +         F   L    +   + +V+   ++M   G   N +  +I+++ 
Sbjct: 66  VALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINC 125

Query: 164 LFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN 219
             +  ++ L +    K++K    PN ++ +  L   C    +S    ++  M   G+ PN
Sbjct: 126 FCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPN 185

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
              F  L++      + +EA  L+  M+  G    +  + V+++G  +    D+A  L  
Sbjct: 186 TVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLN 245

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
           KM Q    P V+ Y ++I G  + K    A +    +E++G  P++V ++ LI CL   G
Sbjct: 246 KMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYG 305

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYN 396
            + DA  +   ++E K+ PD +TF +L+      G+     KL   +    ++  +V Y+
Sbjct: 306 RWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYS 365

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
           +L++ FC     ++A +++  M+ K   PD  ++  L++G C  ++++E + V++ +   
Sbjct: 366 SLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR 425

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
               N   +  ++  L +AG C  A ++F+  + +  P ++++Y   + GL + G+ E+A
Sbjct: 426 GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 485

Query: 517 YILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
            +++  ++   + P  YTY +M+   CK   ++
Sbjct: 486 MVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/501 (23%), Positives = 232/501 (46%), Gaps = 11/501 (2%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
           A++ F    K R  F  +  F  ++S + ++  +F+ V  +  ++  +G      T+ + 
Sbjct: 65  AVALFGEMVKSRP-FPSIIEFSKLLSAIAKMN-KFDVVISLGEQMQNLGIPHNHYTYSIL 122

Query: 126 LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL--- 182
           +  + R     + L    +M + G+ PN    + +++      R+   + ++ +  +   
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182

Query: 183 -PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
            PN ++FN  +  L   N  S    +I  MV KG  P++  + +++N  CK G    A+ 
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 242

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           LL  M        V  +  +IDG  + + +D A  L+++M   G  PNVVTY+SLI    
Sbjct: 243 LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302

Query: 302 EAKMFSIAFSFL-DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
               +S A   L DM+E + + PD+   + LID   K G   +A  +YD +++  + P  
Sbjct: 303 NYGRWSDASRLLSDMIERKIN-PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361

Query: 361 YTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
            T+ SL++  C+  R     ++   +       D+V YN L+  FCK     + ++++  
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           M  +G   +  ++  L++GL  A   D A  +++ +V +    N   +  ++D L + G+
Sbjct: 422 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 481

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
             KA+ +F      K    + +Y + I G+ + G+ E+ + L+  +    V P+   Y  
Sbjct: 482 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNT 541

Query: 538 MLLSFCKERNIKMVKRLLQDV 558
           M+  FC++ + +    L +++
Sbjct: 542 MISGFCRKGSKEEADALFKEM 562



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 147/306 (48%), Gaps = 7/306 (2%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK---ETQL-PNFLSFNIALC 193
            L  F EM   G  PN    + ++  L   GR     ++L    E ++ P+  +F+  + 
Sbjct: 275 ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALID 334

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
              K   +   + +   MV++   P++  +  L+N FC   R+ EA Q+   M++     
Sbjct: 335 AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP 394

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
            V  +  LI GF + +R++    ++ +M Q G   N VTY  LI+G  +A    +A    
Sbjct: 395 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 454

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
             + S+G  P+++ +N L+D L K G  + A+ V++ L   K+ P  YT+  ++  +C +
Sbjct: 455 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 514

Query: 374 GRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           G+      L C L    V+ D+V YN ++S FC+ G   +A  L+  M + G  P++  +
Sbjct: 515 GKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCY 574

Query: 431 VGLLRG 436
             L+R 
Sbjct: 575 NTLIRA 580



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/393 (23%), Positives = 167/393 (42%), Gaps = 32/393 (8%)

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
           + G MV+   +P++  F  LL+   KM +      L   M  LG   +   +++LI+ F 
Sbjct: 68  LFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFC 127

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
           R  +L +A  +  KM++ G  PN+VT +SL+ G+  +K  S A + +D +   G+ P+ V
Sbjct: 128 RRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTV 187

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL 386
             N LI  L       +A+ + D ++     PD                           
Sbjct: 188 TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPD--------------------------- 220

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
                LV Y  +++  CK G  + A  L N M      P    +  ++ GLC  + +D+A
Sbjct: 221 -----LVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 275

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
           +N+++ +       N   +++++  L   GR   A +L    I  K   DV +++  I  
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 335

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
            ++ G+  EA  LY +M   ++ P+  TY  ++  FC    +   K++ + ++      D
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395

Query: 567 YHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLI 599
             T   L K   K+      +    EM   GL+
Sbjct: 396 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 428



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 4/190 (2%)

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCN 194
           +E F EM + G   NT   NI++  LF+ G  D+  ++ KE       PN +++N  L  
Sbjct: 416 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 475

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           LCK   +     V   + R    P +  + I++   CK G++ + + L   +   G    
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 535

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           V A+  +I GF R    + A  L+++M ++G  PN   Y +LI+  +       +   + 
Sbjct: 536 VVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIK 595

Query: 315 MLESEGHAPD 324
            + S G A D
Sbjct: 596 EMRSCGFAGD 605



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 56/263 (21%), Positives = 117/263 (44%), Gaps = 3/263 (1%)

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL---LPKLVCGLEVEADLVVYNAL 398
           DDA+ ++  +++ +  P    F  LLS +    +F +   L + +  L +  +   Y+ L
Sbjct: 63  DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           ++ FC+      A+ +   M+  G+ P+  +   LL G C +++I EA+ +   + +   
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
             N      ++  L    +  +A+ L  R + +    D+V+Y V + GL + G T+ A+ 
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 242

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
           L ++M+   + P    Y  ++   CK +++     L +++    I  +  T   L   + 
Sbjct: 243 LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302

Query: 579 KFHSSSSAVNQLVEMCNLGLIPD 601
            +   S A   L +M    + PD
Sbjct: 303 NYGRWSDASRLLSDMIERKINPD 325



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/229 (20%), Positives = 102/229 (44%), Gaps = 5/229 (2%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDV 207
           P+    N ++    K  RV+ G++V +E      + N +++NI +  L +  D    +++
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 453

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
              MV  G  PN+  +  LL+  CK G++ +A  +   +       ++  + ++I+G  +
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 513

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
             +++    L+  +   G  P+VV Y ++I GF        A +    ++ +G  P+   
Sbjct: 514 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGC 573

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
           +N LI    + G  + + ++   +       D+ T   L++ +   GR 
Sbjct: 574 YNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNMLHDGRL 621


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 118/468 (25%), Positives = 226/468 (48%), Gaps = 25/468 (5%)

Query: 142  FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ---LP-NFLSFNIALCNLCK 197
            F EM +    P+    + ++  + K+ + D+ I + ++ Q   +P N  +++I +   C+
Sbjct: 683  FGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCR 742

Query: 198  LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
             + +     V+G M++ G+ PN+     LLN +C   RI+EA  L+  M   G   +   
Sbjct: 743  RSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVT 802

Query: 258  WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
            +  LI G     +   A  L ++MV  GC P++VTY  ++ G  +     +AF+ L+ +E
Sbjct: 803  FNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME 862

Query: 318  SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
                 P ++ +N +ID L K    DDAL+++  +    + P+  T+ SL+S +C  GR+S
Sbjct: 863  QGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWS 922

Query: 378  LLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
               +L+  +   ++  D+  ++AL+  F K G   +A KLY+ M+ +   P   ++  L+
Sbjct: 923  DASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLI 982

Query: 435  RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
             G C   ++DEA  +++ +V  +   +   +  ++    +  R  + +++FR        
Sbjct: 983  NGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 1042

Query: 495  LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
             + V+Y + I+GL + G  + A  ++ +M    VPPN  TY  +L   CK  N K+ K  
Sbjct: 1043 GNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK--NGKLEK-- 1098

Query: 555  LQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVE-MCNLGLIPD 601
                  A +  +Y    ++   I+ +       N ++E MC  G + D
Sbjct: 1099 ------AMVVFEYLQRSKMEPTIYTY-------NIMIEGMCKAGKVED 1133



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 96/422 (22%), Positives = 206/422 (48%), Gaps = 7/422 (1%)

Query: 135  YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNI 190
            + +V+   ++M   G   N +  +I+++   +  ++ L +    K++K    PN ++ + 
Sbjct: 711  FDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSS 770

Query: 191  ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
             L   C    +S    ++  M   G+ PN   F  L++      + +EA  L+  M+  G
Sbjct: 771  LLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG 830

Query: 251  TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
                +  + V+++G  +    D+A  L  KM Q    P V+ Y ++I G  + K    A 
Sbjct: 831  CQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDAL 890

Query: 311  SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
            +    +E++G  P++V ++ LI CL   G + DA  +   ++E K+ PD +TF +L+   
Sbjct: 891  NLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF 950

Query: 371  CLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
               G+     KL   +    ++  +V Y++L++ FC     ++A +++  M+ K   PD 
Sbjct: 951  VKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDV 1010

Query: 428  YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
             ++  L++G C  ++++E + V++ +       N   +  ++  L +AG C  A ++F+ 
Sbjct: 1011 VTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKE 1070

Query: 488  AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN 547
             + +  P ++++Y   + GL + G+ E+A +++  ++   + P  YTY +M+   CK   
Sbjct: 1071 MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 1130

Query: 548  IK 549
            ++
Sbjct: 1131 VE 1132



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/417 (24%), Positives = 209/417 (50%), Gaps = 15/417 (3%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALC 193
            ++ F +M +    P+    N ++  + K+ + D+ I + K+ ++     +  +FNI + 
Sbjct: 172 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 231

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
             C    VS    ++G M++ G+ P+      L+N FC+  R+++A  L+  M+ +G   
Sbjct: 232 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 291

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
            + A+  +ID   + +R++ A   ++++ + G  PNVVTYT+L+ G   +  +S A   L
Sbjct: 292 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 351

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
             +  +   P+++ ++ L+D   K G   +A ++++ ++ + + PD  T+ SL++ +CL 
Sbjct: 352 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLH 411

Query: 374 GR-------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
            R       F L+    C     AD+V YN L++ FCKA      +KL+  M  +G   +
Sbjct: 412 DRIDEANQMFDLMVSKGC----LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 467

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
             ++  L++G   A  +D+A   +  +     + +   +  ++  L + G   KA+ +F 
Sbjct: 468 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 527

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
                +  LD+V+YT  IRG+ + G+ EEA+ L+  +    + P+  TY  M+   C
Sbjct: 528 DMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 584



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 120/504 (23%), Positives = 231/504 (45%), Gaps = 15/504 (2%)

Query: 66   ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
            A++ F    K R  F  +  F  ++S + ++  +F+ V  +  ++  +G      T+ + 
Sbjct: 679  AVALFGEMVKSRP-FPSIIEFSKLLSAIAKMN-KFDVVISLGEQMQNLGIPHNHYTYSIL 736

Query: 126  LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL--- 182
            +  + R     + L    +M + G+ PN    + +++      R+   + ++ +  +   
Sbjct: 737  INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 796

Query: 183  -PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
             PN ++FN  +  L   N  S    +I  MV KG  P++  + +++N  CK G    A+ 
Sbjct: 797  QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 856

Query: 242  LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
            LL  M        V  +  +IDG  + + +D A  L+++M   G  PNVVTY+SLI    
Sbjct: 857  LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 916

Query: 302  EAKMFSIAFSFL-DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
                +S A   L DM+E + + PD+   + LID   K G   +A  +YD +++  + P  
Sbjct: 917  NYGRWSDASRLLSDMIERKIN-PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 975

Query: 361  YTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
             T+ SL++  C+  R     ++   +       D+V YN L+  FCK     + ++++  
Sbjct: 976  VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 1035

Query: 418  MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
            M  +G   +  ++  L++GL  A   D A  +++ +V +    N   +  ++D L + G+
Sbjct: 1036 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 1095

Query: 478  CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
              KA+ +F      K    + +Y + I G+ + G+ E+ + L+  +    V P+   Y  
Sbjct: 1096 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNT 1155

Query: 538  MLLSFC----KERNIKMVKRLLQD 557
            M+  FC    KE    + K + +D
Sbjct: 1156 MISGFCRKGSKEEADALFKEMKED 1179



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 113/523 (21%), Positives = 215/523 (41%), Gaps = 95/523 (18%)

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           I+G++ ++G      T    +  + R       +   D+M   G+ P+  A N ++D L 
Sbjct: 245 ILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLC 304

Query: 166 KIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
           K  RV+      KE +     PN +++   +  LC  +  S+   ++  M++K   PNV 
Sbjct: 305 KTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVI 364

Query: 222 MFEILLNCFCKMG-----------------------------------RIAEAYQLLGLM 246
            +  LL+ F K G                                   RI EA Q+  LM
Sbjct: 365 TYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM 424

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
           ++ G    V ++  LI+GF + +R++    L+ +M Q G   N VTY +LI+GF +A   
Sbjct: 425 VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDV 484

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
             A  F   ++  G +PD+  +N+L+  L   G  + AL +++ + + ++  D  T+ ++
Sbjct: 485 DKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTV 544

Query: 367 LSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           +  +C +G+      L C L ++    D+V Y  ++S  C  G  ++   LY  M  +  
Sbjct: 545 IRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQE-- 602

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL---IEAGRCHK 480
                   GL++  C     D        I ++   +   +       L   I++G C K
Sbjct: 603 --------GLMKNDCTLSDGD--------ITLSAELIKKMLSCGYAPSLLKDIKSGVCKK 646

Query: 481 AIQLFR---------------RAIVEKYPLD-----------------VVSYTVAIRGLL 508
           A+ L R               R  + +  LD                 ++ ++  +  + 
Sbjct: 647 ALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIA 706

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
           +  + +    L  QM+++ +P N YTY +++  FC+   + + 
Sbjct: 707 KMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLA 749



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 147/306 (48%), Gaps = 7/306 (2%)

Query: 138  VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK---ETQL-PNFLSFNIALC 193
             L  F EM   G  PN    + ++  L   GR     ++L    E ++ P+  +F+  + 
Sbjct: 889  ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALID 948

Query: 194  NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
               K   +   + +   MV++   P++  +  L+N FC   R+ EA Q+   M++     
Sbjct: 949  AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP 1008

Query: 254  SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
             V  +  LI GF + +R++    ++ +M Q G   N VTY  LI+G  +A    +A    
Sbjct: 1009 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 1068

Query: 314  DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
              + S+G  P+++ +N L+D L K G  + A+ V++ L   K+ P  YT+  ++  +C +
Sbjct: 1069 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 1128

Query: 374  GRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
            G+      L C L    V+ D+V YN ++S FC+ G   +A  L+  M + G  P++  +
Sbjct: 1129 GKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCY 1188

Query: 431  VGLLRG 436
              L+R 
Sbjct: 1189 NTLIRA 1194



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/393 (23%), Positives = 167/393 (42%), Gaps = 32/393 (8%)

Query: 207  VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
            + G MV+   +P++  F  LL+   KM +      L   M  LG   +   +++LI+ F 
Sbjct: 682  LFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFC 741

Query: 267  RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
            R  +L +A  +  KM++ G  PN+VT +SL+ G+  +K  S A + +D +   G+ P+ V
Sbjct: 742  RRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTV 801

Query: 327  FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL 386
              N LI  L       +A+ + D ++     PD                           
Sbjct: 802  TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPD--------------------------- 834

Query: 387  EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
                 LV Y  +++  CK G  + A  L N M      P    +  ++ GLC  + +D+A
Sbjct: 835  -----LVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 889

Query: 447  INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
            +N+++ +       N   +++++  L   GR   A +L    I  K   DV +++  I  
Sbjct: 890  LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 949

Query: 507  LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
             ++ G+  EA  LY +M   ++ P+  TY  ++  FC    +   K++ + ++      D
Sbjct: 950  FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 1009

Query: 567  YHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLI 599
              T   L K   K+      +    EM   GL+
Sbjct: 1010 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 1042



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/344 (24%), Positives = 158/344 (45%), Gaps = 8/344 (2%)

Query: 267 RLR--RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
           RLR  +L+ A  L+  MV++   P++V +  L+   ++ K + +  S    +E  G   D
Sbjct: 163 RLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRND 222

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLP 380
           L   N++I+C         AL +   +L+L   PD  T  SL++  C   R S    L+ 
Sbjct: 223 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 282

Query: 381 KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
           K+V  +  + D+V YNA++   CK    N A   +  +  KG  P+  ++  L+ GLC +
Sbjct: 283 KMV-EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 341

Query: 441 RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSY 500
            +  +A  +   ++      N   ++A++D  ++ G+  +A +LF   +      D+V+Y
Sbjct: 342 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 401

Query: 501 TVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
           +  I GL    R +EA  ++  M       +  +Y  ++  FCK + ++   +L +++  
Sbjct: 402 SSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 461

Query: 561 ARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMW 604
             +  +  T   L +  F+      A     +M   G+ PD +W
Sbjct: 462 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPD-IW 504



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/405 (21%), Positives = 173/405 (42%), Gaps = 38/405 (9%)

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
           ++ +A  L   M+      S+  +  L+    +L++ D+   L +KM   G   ++ T+ 
Sbjct: 168 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 227

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
            +I  F      S+A S L  +   G+ PD V    L++   +     DA+ + D ++E+
Sbjct: 228 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 287

Query: 355 KLVPD--SY---------------------------------TFCSLLSTVCLSGRFSLL 379
              PD  +Y                                 T+ +L++ +C S R+S  
Sbjct: 288 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 347

Query: 380 PKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
            +L+  +   ++  +++ Y+ALL  F K G   +A +L+  M+     PD  ++  L+ G
Sbjct: 348 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 407

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
           LC   +IDEA  ++  +V      +   +  +++   +A R    ++LFR         +
Sbjct: 408 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 467

Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
            V+Y   I+G  + G  ++A   +SQM    + P+ +TY ++L   C    ++    + +
Sbjct: 468 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 527

Query: 557 DVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           D+    ++LD  T   + + + K      A +    +   GL PD
Sbjct: 528 DMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 572



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 105/552 (19%), Positives = 223/552 (40%), Gaps = 41/552 (7%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D+ ++  +I+ +  L  R +    +   +   GC+    ++   +  + + +     ++ 
Sbjct: 397 DIVTYSSLINGLC-LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKL 455

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
           F EM + G   NT   N ++   F+ G VD   +   +       P+  ++NI L  LC 
Sbjct: 456 FREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCD 515

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
             ++     +   M ++    ++  +  ++   CK G++ EA+ L   +   G    +  
Sbjct: 516 NGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVT 575

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T ++ G      L     L+ KM Q G   N  T +            +++   +  + 
Sbjct: 576 YTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSD--------GDITLSAELIKKML 627

Query: 318 SEGHAPDL---VFHNVLIDCLSKMGSY----------------------DDALDVYDGLL 352
           S G+AP L   +   V    LS + ++                      DDA+ ++  ++
Sbjct: 628 SCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMV 687

Query: 353 ELKLVPDSYTFCSLLSTVCLSGRFSL---LPKLVCGLEVEADLVVYNALLSYFCKAGFPN 409
           + +  P    F  LLS +    +F +   L + +  L +  +   Y+ L++ FC+     
Sbjct: 688 KSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLP 747

Query: 410 QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
            A+ +   M+  G+ P+  +   LL G C +++I EA+ +   + +     N      ++
Sbjct: 748 LALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLI 807

Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
             L    +  +A+ L  R + +    D+V+Y V + GL + G T+ A+ L ++M+   + 
Sbjct: 808 HGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE 867

Query: 530 PNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQ 589
           P    Y  ++   CK +++     L +++    I  +  T   L   +  +   S A   
Sbjct: 868 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 927

Query: 590 LVEMCNLGLIPD 601
           L +M    + PD
Sbjct: 928 LSDMIERKINPD 939



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 4/190 (2%)

Query: 139  LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCN 194
            +E F EM + G   NT   NI++  LF+ G  D+  ++ KE       PN +++N  L  
Sbjct: 1030 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 1089

Query: 195  LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
            LCK   +     V   + R    P +  + I++   CK G++ + + L   +   G    
Sbjct: 1090 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 1149

Query: 255  VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
            V A+  +I GF R    + A  L+++M ++G  PN   Y +LI+  +       +   + 
Sbjct: 1150 VVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIK 1209

Query: 315  MLESEGHAPD 324
             + S G A D
Sbjct: 1210 EMRSCGFAGD 1219



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/229 (20%), Positives = 102/229 (44%), Gaps = 5/229 (2%)

Query: 152  PNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDV 207
            P+    N ++    K  RV+ G++V +E      + N +++NI +  L +  D    +++
Sbjct: 1008 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 1067

Query: 208  IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
               MV  G  PN+  +  LL+  CK G++ +A  +   +       ++  + ++I+G  +
Sbjct: 1068 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 1127

Query: 268  LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
              +++    L+  +   G  P+VV Y ++I GF        A +    ++ +G  P+   
Sbjct: 1128 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGC 1187

Query: 328  HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
            +N LI    + G  + + ++   +       D+ T   L++ +   GR 
Sbjct: 1188 YNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNMLHDGRL 1235


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/426 (25%), Positives = 209/426 (49%), Gaps = 10/426 (2%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALC 193
            ++ FDE+G+ GF P+      ++  L KIG     +++LK+ +     P+ +++N  + 
Sbjct: 160 AVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVID 219

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
           +LCK    +        MV +G  PNV  +  +L+ FC +G++ EA  L   MI      
Sbjct: 220 SLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMP 279

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
           +   +T+L+DG  +   +  A  ++E M +NG  P+  TY++L+ G+        A    
Sbjct: 280 NTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLF 339

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           D++  +G AP +  +N+LI+   K    ++A  +   + +  L PD+ T+ +L+   C +
Sbjct: 340 DIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQA 399

Query: 374 GRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           GR  +  KL   +C   +  D + Y+ LL   CK G  ++A +L   M +    P    +
Sbjct: 400 GRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIY 459

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             L++G+C   K++ A  ++  + +     +   +T ++  L++ G  ++A ++FR+ +V
Sbjct: 460 NILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVV 519

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
                +  +Y VAI+G L  G    A  L  +M       ++ T++ MLL    E N ++
Sbjct: 520 NGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQ-MLLDL--ESNDEI 576

Query: 551 VKRLLQ 556
           + R ++
Sbjct: 577 ISRFMR 582



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 128/488 (26%), Positives = 209/488 (42%), Gaps = 54/488 (11%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI------KVLKETQLPN 184
           + + Y  V+    +M      PN +   I+++ L    R  +        K+ K    P 
Sbjct: 81  KKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPT 140

Query: 185 FLSFNIALCNLC---KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
            ++F   L  LC   K+ D   + D IG M   GF P++  +  ++   CK+G    A Q
Sbjct: 141 HVTFGTLLNGLCSKAKIIDAVKLFDEIGKM---GFAPSLITYTTIIKGLCKIGHTTNALQ 197

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           LL  M   G    V A+  +ID   + RR + A Y + +MV  G  PNVVTY+S++ GF 
Sbjct: 198 LLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFC 257

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
                + A S    +      P+ V   +L+D L K G   +A  V++ + E  + PD+Y
Sbjct: 258 NLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAY 317

Query: 362 TFCSLLSTVCLSGRFSLLPKL--------------------------------------V 383
           T+ +L+   CL  +     KL                                      +
Sbjct: 318 TYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEM 377

Query: 384 CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
              ++  D V Y+ L+  FC+AG P  A KL+  M   G  PD+ ++  LL GLC    +
Sbjct: 378 YDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHL 437

Query: 444 DEAINVYQGIVMNNPAVNAH--VHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYT 501
           DEA  + +   M    +  H  ++  ++  +   G+   A +LF    V+     VV+YT
Sbjct: 438 DEAFRLLKA--MQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYT 495

Query: 502 VAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
           V I GLL+ G + EA  ++ +M      PN+ TY V +  F +  +     RL+++++  
Sbjct: 496 VMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGR 555

Query: 562 RIELDYHT 569
               D  T
Sbjct: 556 GFSADSST 563



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 116/458 (25%), Positives = 217/458 (47%), Gaps = 11/458 (2%)

Query: 112 RVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD 171
             G   K ++FL F+  ++          +   +   GF  N    + V D +    ++ 
Sbjct: 2   ETGTFPKFRSFLFFIHQHFTTSTASTTNISPSSITNGGFCSNYNNLHSVADAVASFNQL- 60

Query: 172 LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFC 231
           LGI+      LP  + FN  L +L K    S V  +   M      PNV    IL+NC C
Sbjct: 61  LGIR-----PLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLC 115

Query: 232 KMGR--IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
              R  +  A+  LG M  LG   +   +  L++G     ++  A  L++++ + G +P+
Sbjct: 116 HSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPS 175

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
           ++TYT++IKG  +    + A   L  +E +G  PD+V +N +ID L K    ++A+  + 
Sbjct: 176 LITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFS 235

Query: 350 GLLELKLVPDSYTFCSLLSTVCLSGRF---SLLPKLVCGLEVEADLVVYNALLSYFCKAG 406
            +++  + P+  T+ S+L   C  G+    + L K + G  V  + V +  L+   CK G
Sbjct: 236 EMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEG 295

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
              +A +++  M + G  PD Y++  L+ G C   ++DEA  ++  +V    A +  V+ 
Sbjct: 296 MILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYN 355

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
            +++   ++ R ++A  L           D V+Y+  ++G  + GR + A  L+ +M   
Sbjct: 356 ILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSY 415

Query: 527 AVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
            + P++ TY ++L   CK  ++    RLL+ + +++IE
Sbjct: 416 GLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIE 453


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/486 (24%), Positives = 219/486 (45%), Gaps = 7/486 (1%)

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNI 190
           Y  VL    +M  FG  PN +  NI+++    + RV        K+LK    P+  +F  
Sbjct: 81  YSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTT 140

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +  LC    +     +   M+ +GF PNV  +  L+N  CK+G  + A +LL  M    
Sbjct: 141 LIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGN 200

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
               V  +T +ID   + R++  A  L+ +MV  G SP++ TYTSL+        +    
Sbjct: 201 CQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVT 260

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
           + L+ + +    PD+V  + ++D L K G   +A ++ D +++  + PD  T+ +L+   
Sbjct: 261 TLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGH 320

Query: 371 CLSGRFSLLPK---LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           CL        K   ++       D++ Y  L++ +CK    ++A+ L+  M  K + PD 
Sbjct: 321 CLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDT 380

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
            ++  L+ GLC   ++ +AI ++  +V      +   ++ ++D L +     +A+ L + 
Sbjct: 381 KTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKA 440

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN 547
                   D+  Y + I G+   G  E A  L+S +    + P+ +TY +M+   CK   
Sbjct: 441 IEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGL 500

Query: 548 IKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKL 607
           +    +L  ++       D  T   + +   + + +  A+  L EM   G   D  +  L
Sbjct: 501 LNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADSCFLML 560

Query: 608 GLLSDE 613
            +LS++
Sbjct: 561 SVLSED 566



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 194/388 (50%), Gaps = 5/388 (1%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+ + F   L ++ K+   S V  +   M   G  PNV    IL+N FC + R+  A+ +
Sbjct: 63  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 122

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           L  ++ LG       +T LI G     ++  A +L++KM+  G  PNVVTY +LI G  +
Sbjct: 123 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 182

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
               S A   L  +E     PD+V +  +ID L K     +A +++  ++   + PD +T
Sbjct: 183 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 242

Query: 363 FCSLLSTVCLSGRF----SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           + SL+  +C    +    +LL ++V   ++  D+V+++ ++   CK G   +A ++ + M
Sbjct: 243 YTSLVHALCNLCEWKHVTTLLNQMVNS-KILPDVVIFSTVVDALCKEGKVTEAHEIVDMM 301

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
           + +G  PD  ++  L+ G C   ++DEA+ V+  +V    A +   +T +++   +  + 
Sbjct: 302 IQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKI 361

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            KA+ LF     +++  D  +Y   + GL   GR ++A  L+ +M      P+  TY ++
Sbjct: 362 DKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSIL 421

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELD 566
           L S CK R+++    LL+ +  + +  D
Sbjct: 422 LDSLCKNRHLEEAMALLKAIEASNLNPD 449



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/318 (22%), Positives = 136/318 (42%), Gaps = 5/318 (1%)

Query: 288 PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
           P++V +  L+    + K +S   S    ++S G  P++   N+LI+    +     A  V
Sbjct: 63  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 122

Query: 348 YDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLVCGLEVEADLVVYNALLSYFC 403
              +L+L   PD  TF +L+  +C+ G+      L  K++     + ++V Y  L++  C
Sbjct: 123 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMI-DEGFQPNVVTYGTLINGLC 181

Query: 404 KAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAH 463
           K G  + A++L  +M      PD   +  ++  LC  R++ EA N++  +V    + +  
Sbjct: 182 KVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIF 241

Query: 464 VHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM 523
            +T++V  L           L  + +  K   DVV ++  +  L + G+  EA+ +   M
Sbjct: 242 TYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMM 301

Query: 524 KHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSS 583
               V P+  TY  ++   C +  +    ++   ++      D  +   L     K H  
Sbjct: 302 IQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKI 361

Query: 584 SSAVNQLVEMCNLGLIPD 601
             A+    EMC    IPD
Sbjct: 362 DKAMYLFEEMCRKEWIPD 379


>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
 gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
          Length = 899

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 137/567 (24%), Positives = 246/567 (43%), Gaps = 60/567 (10%)

Query: 114 GCVIKAQTFLLFLR-IYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD- 171
           GC +   T+ L ++ +   G ++G      +EM   G  P+ +  N ++D   K GR+  
Sbjct: 190 GCSLNLHTYTLLIKGLCKEGRIHG-ARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKD 248

Query: 172 -LGIKVLKETQ--LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLN 228
            LGIK L E     P+  ++NI +  LC        ++++   + +GF P V  F  ++N
Sbjct: 249 ALGIKALMERNGCNPDDWTYNILIYGLCG-EKPDEAEELLNDAIVRGFTPTVITFTNIIN 307

Query: 229 CFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLI-------------------------- 262
            +CK  RI +A ++   M++    L + A+ VLI                          
Sbjct: 308 GYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAP 367

Query: 263 ---------DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
                    DG+ ++ ++  A  ++  M   GC PN  TY+SLI G ++ +    A + +
Sbjct: 368 NVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALI 427

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
             ++ +G  P ++ +  LI    K   +D+A  +++ + +  L PD   +  L   +C S
Sbjct: 428 TKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKS 487

Query: 374 GRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
           GR       +    V    V Y +L+  F KAG  + A  L   M+++G   D+Y++  L
Sbjct: 488 GRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVL 547

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           L+ LC  +K++EA+++   + ++    N   +T I+  +I+ G+   A  +F   I   +
Sbjct: 548 LQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGH 607

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
                +YTV I    + G+ EEA  L  +M+   V P+  TY V +        +     
Sbjct: 608 KPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFS 667

Query: 554 LLQDVIDARIELDYHTSIRLTKFIFKF------HSSSSAVNQLVEMCNLGLIPDEMWRKL 607
            L+ +IDA  E +Y T   L K   K       +  +S +   +E+       D +W+ L
Sbjct: 668 TLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIEL-------DTVWQLL 720

Query: 608 GLLSDETMTPV-----SLFDGFVPCER 629
             +    + P      S+  GF    R
Sbjct: 721 ERMVKHGLNPTAVTYSSIIAGFCKATR 747



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 135/585 (23%), Positives = 231/585 (39%), Gaps = 117/585 (20%)

Query: 77  RDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYG 136
           R     V +++ MI    + +GR +   GI   + R GC     T+ + +        YG
Sbjct: 224 RGVVPSVWTYNAMIDGYCK-SGRMKDALGIKALMERNGCNPDDWTYNILI--------YG 274

Query: 137 MVLEAFDEMGRF-------GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP-----N 184
           +  E  DE           GFTP       +++   K  R+D  ++V K + L      +
Sbjct: 275 LCGEKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRV-KTSMLSSNCKLD 333

Query: 185 FLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLG 244
             ++ + +  L K       K+ +  M   G  PNV ++  +++ +CK+G++  A ++  
Sbjct: 334 LQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFR 393

Query: 245 LMITLGTSLSVNAWTV--LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           LM   G     NAWT   LI G  + ++L  A  L  KM ++G +P V+TYT+LI+G  +
Sbjct: 394 LMEHEGCR--PNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCK 451

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVL------------------------------- 331
              F  AF   +M+E  G  PD   +NVL                               
Sbjct: 452 KHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFLVRKGVVLTKVTYTS 511

Query: 332 -IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC----LSGRFSLLPKLVCGL 386
            +D  SK G+ D A  + + ++      DSYT+  LL  +C    L+   S+L ++    
Sbjct: 512 LVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLS- 570

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
            V+ ++V Y  ++S   K G  + A  ++N M+  G  P   ++   +   C   +I+EA
Sbjct: 571 GVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEA 630

Query: 447 IN---------VYQGIVMNNPAVNAHVHTAIVD-------RLIEAG-------------- 476
            +         V   +V  N  +N   H   +D       R+I+A               
Sbjct: 631 EHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKH 690

Query: 477 ---------------------RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
                                      QL  R +        V+Y+  I G  +  R EE
Sbjct: 691 FLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEE 750

Query: 516 AYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
           A +L+  M+   + PN   Y +++   C   +IK+  + +  V D
Sbjct: 751 ACVLFDHMRGKDISPNEEIYTMLIKCCC---DIKLFGKAVSFVTD 792



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 116/568 (20%), Positives = 233/568 (41%), Gaps = 65/568 (11%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D+Q++  +I+V+ +   RF+  +  V E+   G       +   +  Y +    G  LE 
Sbjct: 333 DLQAYGVLINVLIKKC-RFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEV 391

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           F  M   G  PN +  + ++  L +  ++   + ++ + Q     P  +++   +   CK
Sbjct: 392 FRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCK 451

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            ++  N   +  MM + G  P+ + + +L +  CK GR  EAY  L   +  G  L+   
Sbjct: 452 KHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFL---VRKGVVLTKVT 508

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T L+DGF +    D A  L EKMV  GC  +  TY+ L++   + K  + A S LD + 
Sbjct: 509 YTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMT 568

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G   ++V + ++I  + K G +D A  +++ ++     P + T+   +S+ C  G+  
Sbjct: 569 LSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIE 628

Query: 378 LLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD-------------- 420
               L+  +E   V  D+V YN  ++     G+ ++A      M+D              
Sbjct: 629 EAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILL 688

Query: 421 -------------------------------------KGFTPDNYSFVGLLRGLCGARKI 443
                                                 G  P   ++  ++ G C A ++
Sbjct: 689 KHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRL 748

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           +EA  ++  +   + + N  ++T ++    +     KA+      I   +   + SY   
Sbjct: 749 EEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHYL 808

Query: 504 IRGLLEGGRTEEAYILYSQMKHIA-VPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
           I GL + G  ++A  L+  +  +     N   ++++     K  ++    +LL  + +  
Sbjct: 809 IVGLCDEGDYDKAKSLFCDLLGMEDYNHNEVAWKILNDGLLKAGHVDFCSQLLSAMENRH 868

Query: 563 IELDYHTSIRLTKFIFKFHSSSSAVNQL 590
            ++D  T   +T  I +  +S S V++L
Sbjct: 869 CQIDSETYSMVTDNIHE--ASGSVVSEL 894



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 101/455 (22%), Positives = 194/455 (42%), Gaps = 42/455 (9%)

Query: 184 NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
           N  S+ I +  LC+   V     ++ MMV+ G   N+  + +L+   CK GRI  A ++L
Sbjct: 159 NEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGRIHGARRVL 218

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN-------------- 289
             M   G   SV  +  +IDG+ +  R+  A  +   M +NGC+P+              
Sbjct: 219 EEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILIYGLCGE 278

Query: 290 --------------------VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHN 329
                               V+T+T++I G+ +A+    A      + S     DL  + 
Sbjct: 279 KPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYG 338

Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE 389
           VLI+ L K   + +A +    +    L P+   + S++   C  G+     ++   +E E
Sbjct: 339 VLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHE 398

Query: 390 A---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
               +   Y++L+    +    ++A+ L   M + G TP   ++  L++G C   + D A
Sbjct: 399 GCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNA 458

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ-LFRRAIVEKYPLDVVSYTVAIR 505
             +++ +  N    +   +  +   L ++GR  +A   L R+ +V    L  V+YT  + 
Sbjct: 459 FRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFLVRKGVV----LTKVTYTSLVD 514

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
           G  + G T+ A +L  +M +     ++YTY V+L + CK++ +     +L  +  + ++ 
Sbjct: 515 GFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKC 574

Query: 566 DYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           +      +   + K      A +   EM + G  P
Sbjct: 575 NIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKP 609



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 157/369 (42%), Gaps = 33/369 (8%)

Query: 234 GRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTY 293
           G + +A  LL +M  +G   +  ++T+LI G    R +  A  L   MVQ+GCS N+ TY
Sbjct: 139 GDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTY 198

Query: 294 TSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE 353
           T LIKG  +      A   L+ +   G  P +  +N +ID   K G   DAL +   +  
Sbjct: 199 TLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMER 258

Query: 354 LKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVK 413
               PD +T                                YN L+   C    P++A +
Sbjct: 259 NGCNPDDWT--------------------------------YNILIYGLCGEK-PDEAEE 285

Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
           L N  + +GFTP   +F  ++ G C A +ID+A+ V   ++ +N  ++   +  +++ LI
Sbjct: 286 LLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLI 345

Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
           +  R  +A +            +VV YT  I G  + G+   A  ++  M+H    PNA+
Sbjct: 346 KKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAW 405

Query: 534 TYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEM 593
           TY  ++    +++ +     L+  + +  I     T   L +   K H   +A      M
Sbjct: 406 TYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMM 465

Query: 594 CNLGLIPDE 602
              GL PDE
Sbjct: 466 EQNGLTPDE 474



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/338 (23%), Positives = 156/338 (46%), Gaps = 4/338 (1%)

Query: 210 MMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLR 269
           MM   G   N   + IL+   C+   + EA  LL +M+  G SL+++ +T+LI G  +  
Sbjct: 150 MMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEG 209

Query: 270 RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHN 329
           R+  A  + E+M   G  P+V TY ++I G+ ++     A     ++E  G  PD   +N
Sbjct: 210 RIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYN 269

Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL--- 386
           +LI  L      D+A ++ +  +     P   TF ++++  C + R     ++   +   
Sbjct: 270 ILIYGLCGEKP-DEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSS 328

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
             + DL  Y  L++   K     +A +  + M   G  P+   +  ++ G C   K+  A
Sbjct: 329 NCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAA 388

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
           + V++ +       NA  +++++  LI+  + HKA+ L  +   +     V++YT  I+G
Sbjct: 389 LEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQG 448

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
             +    + A+ L+  M+   + P+   Y V+  + CK
Sbjct: 449 QCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCK 486



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/444 (20%), Positives = 185/444 (41%), Gaps = 31/444 (6%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           +Q     D Q+++ +   + + +GR E        L R G V+   T+   +  + +   
Sbjct: 466 EQNGLTPDEQAYNVLTHALCK-SGRAEEAYSF---LVRKGVVLTKVTYTSLVDGFSKAGN 521

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP----NFLSFNI 190
                   ++M   G   +++  ++++  L K  +++  + +L +  L     N +++ I
Sbjct: 522 TDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTI 581

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +  + K     + K +   M+  G  P+   + + ++ +CK+G+I EA  L+G M   G
Sbjct: 582 IISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDG 641

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
            +  V  + V I+G   +  +D A    ++M+   C PN  TY  L+K F++        
Sbjct: 642 VAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLK-------M 694

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
           S +D             H V    +      D    + + +++  L P + T+ S+++  
Sbjct: 695 SLVDA------------HYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGF 742

Query: 371 CLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           C + R     +L   + G ++  +  +Y  L+   C      +AV     M++ GF P  
Sbjct: 743 CKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPHL 802

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIV-MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
            S+  L+ GLC     D+A +++  ++ M +   N      + D L++AG      QL  
Sbjct: 803 ESYHYLIVGLCDEGDYDKAKSLFCDLLGMEDYNHNEVAWKILNDGLLKAGHVDFCSQLLS 862

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEG 510
                   +D  +Y++    + E 
Sbjct: 863 AMENRHCQIDSETYSMVTDNIHEA 886


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/452 (25%), Positives = 212/452 (46%), Gaps = 46/452 (10%)

Query: 115 CVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI 174
           C+I  Q   L   I   G+ YG V+    +M   G +P+ +  +I++D    + RVDL  
Sbjct: 93  CII--QFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAF 150

Query: 175 KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
            V  +                               M++ G  P+   F  L+N  CK+G
Sbjct: 151 SVFSK-------------------------------MIKLGLQPDAVTFNTLINGLCKVG 179

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
           + A+A +        G   +V  +T +I+G  ++     A  L++KM + GC PNVVTY 
Sbjct: 180 KFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYN 239

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
            LI    + K+ + A      ++++  +PD+  +N LI  L     + +A  + + +  L
Sbjct: 240 ILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSL 299

Query: 355 KLVPDSYTFCSLLSTVCLSGRFSLLP---KLVCGLEVEADLVVYNALLSYFCKAGFPNQA 411
            ++P+ +TF  L+  +C  G+ S      K +  + VE D+V Y++L+  +       +A
Sbjct: 300 NIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEA 359

Query: 412 VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN-----VYQGIVMNNPAVNAHVHT 466
            KL++ M+ KG  PD +S+  L++G C A++IDEA       ++QG+  +N   N  +H 
Sbjct: 360 RKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHG 419

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
                L + GR  +A  LF+         D+ +Y++ + G  + G   +A+ L+  M+  
Sbjct: 420 -----LCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQST 474

Query: 527 AVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
            + P+   Y +++ + CK  N+K  ++L  ++
Sbjct: 475 YLKPDIAMYNILIDAMCKFGNLKDARKLFSEL 506



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/430 (26%), Positives = 197/430 (45%), Gaps = 4/430 (0%)

Query: 176 VLKETQLPNFLSFNIALCNLCKLNDV-SNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
           +L    LP  + F   L  + K+      V  +   M   G  P++    IL++CF  + 
Sbjct: 85  MLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQ 144

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
           R+  A+ +   MI LG       +  LI+G  ++ +   A   ++    +GC P V TYT
Sbjct: 145 RVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYT 204

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
           ++I G  +    + A      +E  G  P++V +N+LID L K    ++ALD++  +   
Sbjct: 205 TIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAK 264

Query: 355 KLVPDSYTFCSLLSTVCLSGRF---SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQA 411
           ++ PD +T+ SL+  +C   R+   S L   +  L +  ++  +N L+   CK G  ++A
Sbjct: 265 RISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEA 324

Query: 412 VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
             ++ TM + G  PD  ++  L+ G     +I EA  ++  ++      +A  +  ++  
Sbjct: 325 QGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKG 384

Query: 472 LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
             +A R  +A QLF   I +    D V+Y   I GL + GR  EA  L+  M      P+
Sbjct: 385 YCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPD 444

Query: 532 AYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLV 591
            +TY ++L  FCKE  +    RL + +    ++ D      L   + KF +   A     
Sbjct: 445 LFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFS 504

Query: 592 EMCNLGLIPD 601
           E+   GL+P+
Sbjct: 505 ELFVQGLLPN 514



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/450 (24%), Positives = 201/450 (44%), Gaps = 8/450 (1%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D+ +   +I   + L  R +    +  ++ ++G    A TF   +    +   +   +E 
Sbjct: 129 DIYTLSILIDCFSHLQ-RVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEF 187

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           FD+    G  P  +    +++ L KIG       + K+ +     PN +++NI + +LCK
Sbjct: 188 FDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCK 247

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              V+   D+   M  K   P++  +  L+   C   R  EA  LL  M +L    ++  
Sbjct: 248 DKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFT 307

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           + VL+D   +  ++  A  +++ M + G  P+VVTY+SL+ G+        A    D + 
Sbjct: 308 FNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMI 367

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
           ++G  PD   +N+LI    K    D+A  +++ ++   L PD+  + +L+  +C  GR  
Sbjct: 368 TKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLR 427

Query: 378 LLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
               L   +       DL  Y+ LL  FCK G+  +A +L+  M      PD   +  L+
Sbjct: 428 EAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILI 487

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
             +C    + +A  ++  + +     N  ++T I++ L + G   +A++ FR    +  P
Sbjct: 488 DAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCP 547

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
            D  SY V IRG L+      A  L  +M+
Sbjct: 548 PDEFSYNVIIRGFLQYKDESRAAQLIGEMR 577



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 139/291 (47%), Gaps = 7/291 (2%)

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE-TQL---PNFLSFNIALCNLCKL 198
           +EM      PN F  N+++D + K G+V     V K  T++   P+ ++++  +      
Sbjct: 294 NEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLR 353

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
            ++   + +   M+ KG  P+   + IL+  +CK  RI EA QL   MI  G +     +
Sbjct: 354 MEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNY 413

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
             LI G  +L RL  A  L++ M  NG  P++ TY+ L+ GF +      AF    +++S
Sbjct: 414 NTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQS 473

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL 378
               PD+  +N+LID + K G+  DA  ++  L    L+P+   + ++++ +C  G    
Sbjct: 474 TYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDE 533

Query: 379 LPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
             +    +E +    D   YN ++  F +    ++A +L   M D+GF  +
Sbjct: 534 ALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAE 584



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/330 (24%), Positives = 142/330 (43%), Gaps = 38/330 (11%)

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           L ++M   G SP++ T + LI  F   +   +AFS    +   G  PD V  N LI+ L 
Sbjct: 117 LSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLC 176

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLV 393
           K+G +  A++ +D        P  YT+ ++++ +C  G  +    L   +E    + ++V
Sbjct: 177 KVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVV 236

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            YN L+   CK    N+A+ +++ M  K  +PD +++  L++GLC  R+  EA  +   +
Sbjct: 237 TYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEM 296

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
              N   N      +VD + + G+  +A  +F+         DVV+Y+  + G       
Sbjct: 297 TSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEI 356

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
            EA  L+  M      P+A++Y +++  +CK + I   K+L                   
Sbjct: 357 VEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFN----------------- 399

Query: 574 TKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
                             EM + GL PD +
Sbjct: 400 ------------------EMIHQGLTPDNV 411



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 54/228 (23%), Positives = 104/228 (45%), Gaps = 6/228 (2%)

Query: 99  RFETV--RGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           R E V  R +   +   GC   A ++ + ++ Y + +      + F+EM   G TP+   
Sbjct: 353 RMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVN 412

Query: 157 RNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N ++  L ++GR+    DL   +     LP+  ++++ L   CK   +     +  +M 
Sbjct: 413 YNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQ 472

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
                P++ M+ IL++  CK G + +A +L   +   G   +V  +T +I+   +   LD
Sbjct: 473 STYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLD 532

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
            A   +  M  +GC P+  +Y  +I+GF++ K  S A   +  +   G
Sbjct: 533 EALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRG 580


>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g22470, mitochondrial-like [Glycine max]
          Length = 468

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 190/379 (50%), Gaps = 7/379 (1%)

Query: 185 FLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLG 244
            + FN  L +L KL     V  +   M  KG   N+    IL+NCFC +G++A ++ LLG
Sbjct: 10  IIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLG 69

Query: 245 LMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
            ++ LG   +   WT L+ G      +    +  +K+V      N V+Y +L+ G  +  
Sbjct: 70  KILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTG 129

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
               A   L M+E     P++V ++ +ID L K    ++A D+Y  +   ++ P+  T+ 
Sbjct: 130 ETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYN 189

Query: 365 SLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
           +L+   CL+G+    FSLL +++    +  D+  ++ L+   CK G    A ++++ M+ 
Sbjct: 190 TLICAFCLAGQLMGAFSLLHEMILK-NINPDVYTFSILIDALCKEG--KNAKQIFHAMVQ 246

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
            G  P+ YS+  ++ GLC  +++DEA+N+ + ++  N   +   + +++D L ++GR   
Sbjct: 247 MGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITS 306

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
           A+ L         P DVV+YT  +  L +    ++A  L+ +MK   + P  YTY  ++ 
Sbjct: 307 ALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALID 366

Query: 541 SFCKERNIKMVKRLLQDVI 559
             CK   +K  + L Q ++
Sbjct: 367 GLCKGGRLKNAQELFQHLL 385



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 118/434 (27%), Positives = 215/434 (49%), Gaps = 13/434 (2%)

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNI 190
           Y  V+    +M   G   N    +I+++    +G++        K+LK    PN +++  
Sbjct: 26  YLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTT 85

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +  LC   +V  +      +V + F  N   +  LLN  CK G    A +LL ++    
Sbjct: 86  LMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRS 145

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
           T  +V  ++ +IDG  + + ++ A  L+ +M      PNV+TY +LI  F  A     AF
Sbjct: 146 TRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAF 205

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
           S L  +  +   PD+   ++LID L K G   +A  ++  ++++ + P+ Y++  +++ +
Sbjct: 206 SLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIMINGL 263

Query: 371 CLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
           C   R     +LL +++    +  D V YN+L+   CK+G    A+ L N M  +G   D
Sbjct: 264 CKCKRVDEAMNLLREML-HKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPAD 322

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
             ++  LL  LC  + +D+A  ++  +         + +TA++D L + GR   A +LF+
Sbjct: 323 VVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQ 382

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS-FCKE 545
             +V+   +DV +YTV I GL + G  +EA  + S+M+     PNA T+ +++ S F K+
Sbjct: 383 HLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKD 442

Query: 546 RNIKMVKRLLQDVI 559
            N K  ++LL ++I
Sbjct: 443 ENDK-AEKLLHEMI 455



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 99/379 (26%), Positives = 165/379 (43%), Gaps = 17/379 (4%)

Query: 128 IYWRGEMYGMVLEA--------FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK- 178
           I W   M G+ L+          D++    F  N  +   +++ L K G     IK+L+ 
Sbjct: 81  ITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRM 140

Query: 179 ---ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGR 235
               +  PN + ++  +  LCK   V+   D+   M  +  +PNV  +  L+  FC  G+
Sbjct: 141 IEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQ 200

Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
           +  A+ LL  MI    +  V  +++LID     +    A  ++  MVQ G +PNV +Y  
Sbjct: 201 LMGAFSLLHEMILKNINPDVYTFSILIDAL--CKEGKNAKQIFHAMVQMGVNPNVYSYNI 258

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           +I G  + K    A + L  +  +   PD V +N LID L K G    AL++ + +    
Sbjct: 259 MINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRG 318

Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAV 412
              D  T+ SLL  +C +        L   ++   ++  +  Y AL+   CK G    A 
Sbjct: 319 QPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQ 378

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
           +L+  +L KG   D +++  ++ GLC     DEA+ +   +  N    NA     I+  L
Sbjct: 379 ELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSL 438

Query: 473 IEAGRCHKAIQLFRRAIVE 491
            E     KA +L    I +
Sbjct: 439 FEKDENDKAEKLLHEMIAK 457


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/424 (23%), Positives = 208/424 (49%), Gaps = 34/424 (8%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCK 197
           V+    +M   G +P+T+  +++++  F++ RVDLG  VL +                  
Sbjct: 141 VISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAK------------------ 182

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
                        +++ G    +  F  L+N  CK+G+  +A +L   M+  G    V+ 
Sbjct: 183 -------------IIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHT 229

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T +I+G  ++     A  L+ KM + GC P+VVTY+++I    + +  + A      ++
Sbjct: 230 YTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMK 289

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF- 376
           ++G +P++  +N LI  L     + +A  + + ++ L ++P+  TF  L++  C  G   
Sbjct: 290 AKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVF 349

Query: 377 --SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
               + K +  + VE ++V Y++L++ +       +A KL++ M+ KG  PD +S+  L+
Sbjct: 350 EARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILI 409

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            G C A++I EA  ++  ++      +   +  ++D L + GR  +A  LF+  +     
Sbjct: 410 NGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNL 469

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
            D+ +Y++ + G  + G   +A+ L+  M+   + PN   Y +++ + CK RN+K  ++L
Sbjct: 470 PDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKL 529

Query: 555 LQDV 558
             ++
Sbjct: 530 FSEL 533



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 98/388 (25%), Positives = 174/388 (44%), Gaps = 36/388 (9%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
           F +MG  G  P+    + ++D L K  RV+  + +    +     PN  ++N  +  LC 
Sbjct: 250 FRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCN 309

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            +       ++  M+     PN+  F +L+N FCK G + EA  +L  M  +G   +V  
Sbjct: 310 FSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVT 369

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           ++ L++G+     +  A  L++ M+  GC P+V +Y  LI G+ +AK    A    + + 
Sbjct: 370 YSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMI 429

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
            +G  PD+V +N LID L ++G   +A D++  +L    +PD                  
Sbjct: 430 HQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPD------------------ 471

Query: 378 LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
                         L  Y+ LL  FCK G+  +A +L+  M      P+   +  L+  +
Sbjct: 472 --------------LCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAM 517

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
           C +R + EA  ++  + +     N  ++T I++ L + G   +A++ FR    +  P + 
Sbjct: 518 CKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNE 577

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKH 525
            SY V IRG L+      A  L  +M+ 
Sbjct: 578 FSYNVIIRGFLQHKDESRAVQLIGEMRE 605



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/294 (23%), Positives = 119/294 (40%), Gaps = 33/294 (11%)

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK-LVPDSYTFCSLL 367
           A ++ + +      P ++  N L+  + KM  Y DA+      +EL  L PD+YT   L+
Sbjct: 105 ALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLI 164

Query: 368 STVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           +       F  L ++  G  V A ++     L+           +  +NT          
Sbjct: 165 NC------FFQLQRVDLGFSVLAKIIKLGLQLT-----------IVTFNT---------- 197

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
                L+ GLC   K  +A+ ++  +V      + H +T I++ L + G    A  LFR+
Sbjct: 198 -----LINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRK 252

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN 547
                   DVV+Y+  I  L +  R  EA  ++S MK   + PN +TY  ++   C    
Sbjct: 253 MGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSR 312

Query: 548 IKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            +    +L +++   I  +  T   L     K  +   A   L  M  +G+ P+
Sbjct: 313 WREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPN 366


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 134/540 (24%), Positives = 244/540 (45%), Gaps = 55/540 (10%)

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
           +   G V    T+ +      R +        F+EM + G  P+  A + ++D   + G 
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 170 VD--LGIK-VLKETQLP-NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEI 225
           +D  L IK V+    +P N +++N+ +  LCK   +    +++  M+  G  PN R F +
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 226 LLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
           L+  +C+   +  A +LL  M       S  ++  +I+G    + L +A  L EKM  +G
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 286 CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL 345
             PNVV Y++LI G+        A   LD +   G APD+  +N +I CLSK G  ++A 
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA- 239

Query: 346 DVYDGLLELK---LVPDSYTFCSL------------------------------LSTVCL 372
             Y  LLE++   L PD+ TF +                               L TV +
Sbjct: 240 STY--LLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLI 297

Query: 373 SGRF---SLLPKL-----VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
           +G F   +L+  L     +  L V  D+   +A +    K G   +A+K+++ + +KG  
Sbjct: 298 NGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLV 357

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           PD +++  L+ G C   ++++A  ++  + +   A N  ++ A+VD L ++G   +A +L
Sbjct: 358 PDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKL 417

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
           F     +    D V+Y+  I G  +     EA+ L+ +M    V P+++ Y  ++   CK
Sbjct: 418 FDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCK 477

Query: 545 ERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSS---SSAVNQLVEMCNLGLIPD 601
           E +++    L +++    ++  + T++     I  +  S     A     EM    ++PD
Sbjct: 478 EGDMEKAMNLFREM----LQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPD 533



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 134/561 (23%), Positives = 241/561 (42%), Gaps = 58/561 (10%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G+ E    I+  +  +GC   ++TF L +  Y R    G  LE  DEM +    P+  + 
Sbjct: 94  GKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSY 153

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
             +++ L     + L  K+L++       PN + ++  +        +   + ++  M  
Sbjct: 154 GAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSC 213

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G  P++  +  +++C  K G++ EA   L  +   G       +   I G+ +  ++  
Sbjct: 214 SGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTE 273

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A   +++M+ +G  PN   YT LI G  +A     A S    L + G  PD+   +  I 
Sbjct: 274 AAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIH 333

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEA 390
            L K G   +AL V+  L E  LVPD +T+ SL+S  C  G      +L   +C   +  
Sbjct: 334 GLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAP 393

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           ++ +YNAL+   CK+G   +A KL++ M +KG  PD+ ++  ++ G C +  + EA +++
Sbjct: 394 NIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLF 453

Query: 451 -----QGIVMNNPAVNAHVH-----------------------------TAIVDRLIEAG 476
                +G+  ++   NA VH                               ++D   ++ 
Sbjct: 454 HEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSC 513

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKH----------- 525
           +  +A QLF+  I ++   D V+YT  I    + G+ EEA +L+ +M+            
Sbjct: 514 KIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFAL 573

Query: 526 ------IAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK 579
                   V P+  TY +++ + CKE N+    +L  +V+   +         L   + K
Sbjct: 574 FEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCK 633

Query: 580 FHSSSSAVNQLVEMCNLGLIP 600
               + A   L EM  LGL P
Sbjct: 634 REDLTEASKLLDEMGELGLKP 654



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 101/492 (20%), Positives = 194/492 (39%), Gaps = 56/492 (11%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D+  ++ +IS +++  G+ E     + E+   G    A TF  F+  Y +        + 
Sbjct: 219 DIFCYNAIISCLSK-AGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKY 277

Query: 142 FDEMGRFGFTPNT--------------------------FARNIVMDV---------LFK 166
           FDEM   G  PN                            A  ++ DV         L K
Sbjct: 278 FDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLK 337

Query: 167 IGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
            GRV   +KV  E +    +P+  +++  +   CK  +V    ++   M  KG  PN+ +
Sbjct: 338 NGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFI 397

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           +  L++  CK G I  A +L   M   G       ++ +IDG+ +   +  A  L+ +M 
Sbjct: 398 YNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMP 457

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
             G  P+   Y +L+ G  +      A +    +  +G A  L F N LID   K     
Sbjct: 458 SKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSF-NTLIDGYCKSCKIQ 516

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYF 402
           +A  ++  ++  +++PD  T+ +++   C +G+      L   ++ E +L+V        
Sbjct: 517 EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQ-ERNLIV-------- 567

Query: 403 CKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNA 462
                 +    L+  M+ KG  PD  ++  ++   C    + EA  +   +V        
Sbjct: 568 ------DTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKG 621

Query: 463 HVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQ 522
            +H  ++  L +     +A +L            + + +  +R   E G+ +EA  ++  
Sbjct: 622 TIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEG 681

Query: 523 MKHIAVPPNAYT 534
           +K + + P+  T
Sbjct: 682 VKSLGLVPDTTT 693



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 91/399 (22%), Positives = 174/399 (43%), Gaps = 30/399 (7%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DVQ+    I  + +  GR +    +  EL   G V    T+   +  + +        E 
Sbjct: 324 DVQTCSAFIHGLLK-NGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFEL 382

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV---LKETQL-PNFLSFNIALCNLCK 197
            DEM   G  PN F  N ++D L K G +    K+   + E  L P+ ++++  +   CK
Sbjct: 383 HDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCK 442

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG--TSLSV 255
             +V+    +   M  KG  P+  ++  L++  CK G + +A  L   M+  G  T+LS 
Sbjct: 443 SENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSF 502

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIK-----GFMEAK------ 304
           N    LIDG+ +  ++  A  L+++M+     P+ VTYT++I      G ME        
Sbjct: 503 N---TLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKE 559

Query: 305 ------MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP 358
                 +    F+  + + ++G  PD V + ++I    K  +  +A  + D ++   ++ 
Sbjct: 560 MQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLT 619

Query: 359 DSYTFCSLLSTVCLSGRFSLLPKLV---CGLEVEADLVVYNALLSYFCKAGFPNQAVKLY 415
                  L++ +C     +   KL+     L ++  L   + L+  F +AG  ++A +++
Sbjct: 620 KGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVF 679

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
             +   G  PD  + + L+ G       ++A N+ + +V
Sbjct: 680 EGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 718


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/434 (25%), Positives = 214/434 (49%), Gaps = 45/434 (10%)

Query: 136 GMVLEAF---DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSF 188
           G + +AF   D++   GF  +  +   ++  L K+G     + +L+        PN + +
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           N  + ++CK+  V+   D+   M+ KG  P+V  +  L++ FC +G++ +A  L   MI 
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMIL 288

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
                 V  + +L++ F +  ++     +++ M++ G  PN VTY SL+ G+   K  + 
Sbjct: 289 ENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNK 348

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A S  + +   G  PD+  ++++I+   K+  +D+A++++  +    ++PD  T+ SL+ 
Sbjct: 349 AKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLID 408

Query: 369 TVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
            +  SGR S   +LV  +    V   +  YN++L   CK    ++A+ L   + DKG  P
Sbjct: 409 GLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQP 468

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           + Y++  L++GLC + K+++A  V++G+                                
Sbjct: 469 NMYTYSILIKGLCQSGKLEDARKVFEGL-------------------------------- 496

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
              +V+ + L+V +YT+ I+G    G   EA  L S+M+     P+A TY +++LS  K+
Sbjct: 497 ---LVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKK 553

Query: 546 RNIKMVKRLLQDVI 559
               M ++LL+++I
Sbjct: 554 DENDMAEKLLREMI 567



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/477 (23%), Positives = 230/477 (48%), Gaps = 7/477 (1%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
           F+ + R   TP  F  N ++  L K       + + ++ +     PN ++ NI +   C+
Sbjct: 73  FNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQ 132

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
           L  +     V   +++ G+ P+   F  L+   C  G+I +A+     ++ LG      +
Sbjct: 133 LGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQIS 192

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  LI G  ++     A  L +++  N   PNVV Y ++I    + K+ + AF     + 
Sbjct: 193 YGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMI 252

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF- 376
           S+G +PD+V ++ LI     +G  +DA+D+++ ++   + PD YTF  L++  C  G+  
Sbjct: 253 SKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMK 312

Query: 377 --SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
               +  ++    ++ + V YN+L+  +C     N+A  ++NTM   G  PD  S+  ++
Sbjct: 313 EGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMI 372

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            G C  +K DEA+N+++ +   N   +   +++++D L ++GR   A+QL  +      P
Sbjct: 373 NGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVP 432

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
             + +Y   +  L +  + ++A  L +++K   + PN YTY +++   C+   ++  +++
Sbjct: 433 PTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKV 492

Query: 555 LQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLS 611
            + ++     L+  T   + +        + A+  L +M + G IPD    ++ +LS
Sbjct: 493 FEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILS 549



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 91/211 (43%), Gaps = 5/211 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D+QS+  MI+   ++  +F+    +  E+ R   +    T+   +    +       L+ 
Sbjct: 364 DIQSYSIMINGFCKIK-KFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQL 422

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
            D+M   G  P     N ++D L KI +VD  I +L + +     PN  +++I +  LC+
Sbjct: 423 VDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQ 482

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              + + + V   ++ KG   NV  + I++  FC  G   EA  LL  M   G       
Sbjct: 483 SGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKT 542

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSP 288
           + ++I    +    DMA  L  +M+  G  P
Sbjct: 543 YEIIILSLFKKDENDMAEKLLREMIARGVRP 573



 Score = 47.4 bits (111), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 39/211 (18%), Positives = 89/211 (42%)

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           + + Y++  + F      + AV L+N +L +  TP  + F  +L  L  ++     + + 
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
           Q +       N      +++   + G    A  +F + +   Y  D +++T  I+GL   
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLK 168

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
           G+ ++A++ + ++  +    +  +Y  ++   CK    +    LLQ V    ++ +    
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 571 IRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
             +   + K    + A +   EM + G+ PD
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMISKGISPD 259


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 112/473 (23%), Positives = 214/473 (45%), Gaps = 34/473 (7%)

Query: 133 EMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIAL 192
           + Y  V+    +M   G +PNT   NI+++    +  VDLG  VL +             
Sbjct: 105 QYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAK------------- 151

Query: 193 CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
                             +++ G  P +  F  L+N  CK G  A+A +L   M+  G  
Sbjct: 152 ------------------VIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQ 193

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
             V  +T +I+G  ++     A  L +KM + GC P+VVTY++LI    + ++ + A   
Sbjct: 194 PDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDI 253

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
              ++++G +P +V +  LI  L     + +A  + + +  L ++PD  TF  L+   C 
Sbjct: 254 FSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCK 313

Query: 373 SGRF---SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
            G       + K +  + VE +++ YN+L+  +       +A KL++ M+ +G  PD +S
Sbjct: 314 EGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFS 373

Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
           +  L+ G C  ++IDEA  ++  ++      N   +T ++    + G+  +A +LF+   
Sbjct: 374 YSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMH 433

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
              Y  D+ +Y+V + G  + G   +A+ L+  M+   + PN   Y +++ S CK  N+ 
Sbjct: 434 TNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLN 493

Query: 550 MVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
             ++L  ++    ++ D      +   + K      A+    +M   G  P+E
Sbjct: 494 HARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNE 546



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/375 (23%), Positives = 178/375 (47%), Gaps = 8/375 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV ++  +I+ + ++ G      G++ ++  VGC     T+   +    +  +    L+ 
Sbjct: 195 DVYTYTTIINGLCKM-GETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDI 253

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           F  M   G +P   +   ++  L    R      +L E      +P+ ++F++ +   CK
Sbjct: 254 FSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCK 313

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
             +V   + V+  M   G  PNV  +  L++ +     + EA +L  +MIT G    V +
Sbjct: 314 EGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFS 373

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +++LI+G+  ++R+D A  L+ +M+  G +PN V+YT+LI  F +      A      + 
Sbjct: 374 YSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMH 433

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
           + G+ PDL  ++VL++   K G    A  ++  +    L P+   +  L+ ++C SG  +
Sbjct: 434 TNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLN 493

Query: 378 LLPKLVCGLEV---EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
              KL   L V   + D+ +Y  +++  CK G  ++A++ +  M + G  P+ +S+  ++
Sbjct: 494 HARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVII 553

Query: 435 RGLCGARKIDEAINV 449
           RG    +    A+ +
Sbjct: 554 RGFLQHKDESRAVQL 568



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 62/272 (22%), Positives = 122/272 (44%), Gaps = 41/272 (15%)

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV---------------------- 370
           D  S   + DDAL  ++ +L  K +P    F  LLS +                      
Sbjct: 63  DASSSFRNIDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGL 122

Query: 371 --------------CLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAV 412
                         CL       FS+L K++  L ++  ++ +  L++  CKAG   QA+
Sbjct: 123 SPNTCTLNILINCFCLMQHVDLGFSVLAKVI-KLGLQPTIITFTTLINGLCKAGEFAQAL 181

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
           +L++ M+ +G  PD Y++  ++ GLC   +   A  + + +       +   ++ ++D L
Sbjct: 182 ELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSL 241

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
            +    ++A+ +F     +     VVSYT  I+GL    R +EA  + ++M  + + P+ 
Sbjct: 242 CKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDI 301

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
            T+ +++  FCKE N+   + +L+ + +  +E
Sbjct: 302 VTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVE 333


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 144/558 (25%), Positives = 246/558 (44%), Gaps = 41/558 (7%)

Query: 11  YTAQRTQILKTIISFKSIHQISSPKVCATTHQDFPIILAPHIVHSTLLNCPSDLIALSFF 70
           YT   +    T    + I +    K+     +  P  L  H+ +S       DLI L +F
Sbjct: 39  YTTPNSHTFDTPTISQLIAKQHWSKLKTIVKETNPSSLLQHLFNSE---AQPDLI-LCYF 94

Query: 71  IWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARV----------------- 113
            W  K+    H+V+ F  ++ ++      +  +R ++   A+                  
Sbjct: 95  KWTQKEFGAIHNVEQFCRLLHLLAN-AKNYNKIRALLDSFAKNAHYSNSTIFHSLSVLGS 153

Query: 114 -GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDL 172
            GC       +L       GEM  + LE FD  G +GF  +  + N ++  L K GR+ +
Sbjct: 154 WGCANSIIVDMLVWAYVKNGEM-DLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGV 212

Query: 173 GIKVLKETQLP----NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLN 228
              V KE        N ++F++ +  LCK+       DV+  M   GF P+V  +  +++
Sbjct: 213 VESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIID 272

Query: 229 CFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSP 288
            +CK G++ +A  LL  M+      +   + +LIDGF R   +  A  ++E+M + G  P
Sbjct: 273 GYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQP 332

Query: 289 NVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVY 348
           NVVTY SLI G         A    D +   G  P++V +N LI+   K     +A ++ 
Sbjct: 333 NVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREML 392

Query: 349 DGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKA 405
           D + +  L P+  TF +L+     +GR     LL  ++    V  ++  YN L+  FC+ 
Sbjct: 393 DDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCRE 452

Query: 406 GFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI--VMNNPAVNAH 463
           G   +A KL   M   G   D  ++  L+  LC   +  +A+ +   +  V  NP+   H
Sbjct: 453 GNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPS---H 509

Query: 464 V-HTAIVDRLIEAGRCHKAIQLFRRAIVEKYP--LDVVSYTVAIRGLLEGGRTEEAYILY 520
           + + A++D     G    A+ +  R ++EK     ++V+Y V I+G    G+ EEA  L 
Sbjct: 510 LTYNALIDGYFREGNSTAALNV--RTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLL 567

Query: 521 SQMKHIAVPPNAYTYRVM 538
           ++M    + PN  TY ++
Sbjct: 568 NEMLEKGLIPNRTTYDIL 585



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 98/390 (25%), Positives = 164/390 (42%), Gaps = 61/390 (15%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR   V  +  E+ R    +   TF + +    +   +    +  ++M  +GF+P+    
Sbjct: 208 GRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITY 267

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N ++D   K G++     +LKE       PN ++FNI +   C+  +V+  K V   M R
Sbjct: 268 NTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQR 327

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +G  PNV  +  L+N  C  G++ EA  L   M  +G   +V  +  LI+GF + + L  
Sbjct: 328 QGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKE 387

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML----------------- 316
           A  + + + + G +PNV+T+ +LI  + +A     AF    M+                 
Sbjct: 388 AREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIV 447

Query: 317 ------------------ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP 358
                             E  G   DLV +N+L+D L K G    A+ + D + E+ L P
Sbjct: 448 GFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNP 507

Query: 359 DSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE---ADLVVYNALLSYFCKAGFPNQAVKLY 415
              T+ +L+      G  +    +   +E +   A++V YN L+  FC  G   +A +L 
Sbjct: 508 SHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLL 567

Query: 416 NTMLDK-------------------GFTPD 426
           N ML+K                   GF PD
Sbjct: 568 NEMLEKGLIPNRTTYDILRDEMMEKGFIPD 597



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/340 (23%), Positives = 158/340 (46%), Gaps = 12/340 (3%)

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
           L   D AG    ++    C+P +V   SL+K   E ++  +   + +M+       ++V 
Sbjct: 179 LEGFDRAGDYGFRLSALSCNPMLV---SLVK---EGRIGVVESVYKEMIRRR-IGVNVVT 231

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF----SLLPKLV 383
            +V+I+ L K+G +  A DV + +      P   T+ +++   C +G+     +LL ++V
Sbjct: 232 FDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMV 291

Query: 384 CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
               +  + + +N L+  FC+      A K++  M  +G  P+  ++  L+ GLC   K+
Sbjct: 292 AK-RIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKL 350

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           DEA+ +   +       N   + A+++   +     +A ++           +V+++   
Sbjct: 351 DEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTL 410

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           I    + GR ++A++L S M    V PN  TY  +++ FC+E N+K  ++L +++    +
Sbjct: 411 IDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGL 470

Query: 564 ELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           + D  T   L   + K   +  AV  L EM  +GL P  +
Sbjct: 471 KADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHL 510


>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Vitis vinifera]
          Length = 798

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 154/614 (25%), Positives = 266/614 (43%), Gaps = 53/614 (8%)

Query: 3   WRC-KRSLFYTAQRTQILKTIISFKSIHQISSPKVCATTHQDFPIILAPHIVHSTLLNCP 61
           +RC   +LF TAQ   I   +++   + +  +P   A   +     L+  IV+  +    
Sbjct: 21  FRCLHANLFTTAQGAAISNEVLT---VMETVNPMEDAL--EKLAPFLSSEIVNDVMREQR 75

Query: 62  SDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQT 121
              +   FFIW  ++R  F    + + +I ++ +  G F+T   I+ EL      I   T
Sbjct: 76  RPELGFRFFIWTTRRRS-FRSWVTHNLVIDMLAKDDG-FDTYWKILEELKNSNIQIPPPT 133

Query: 122 FLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV----L 177
           F + +  Y +  M    +E+F +M  FG  P+ F  N ++ V+ +     L + V    L
Sbjct: 134 FSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQML 193

Query: 178 KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIA 237
           K    PN  +F I L  LCK     +   +   M +KG  PN  ++ I+L+  C+  R  
Sbjct: 194 KLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTD 253

Query: 238 EAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLI 297
           + ++LL  M   G          L+DGF +L ++D A  L +   + G    +  Y+SLI
Sbjct: 254 DVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLI 313

Query: 298 KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
            G   AK +     +   +   G  PD+V + +LI    ++G  D AL++ + + +  L 
Sbjct: 314 DGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLS 373

Query: 358 PDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEAD-----LVVYNALLSYFCKAGFPNQAV 412
           PD+Y + +L+   C  G       L   LE+  +        Y  L+   C+ G  ++A 
Sbjct: 374 PDTYCYNALIKGFCDVGLLDKARSL--QLEISKNDCFPTSCTYTILICGMCRNGLLDEAR 431

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV-YQGIVMNNPAVNAHVHTAIVDR 471
           +++N M + G +P   +F  L+ GLC A +++EA ++ Y+  +  NP++   +     DR
Sbjct: 432 QIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQG-ADR 490

Query: 472 LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
           +                      +D  S    +  L E G   +AY L  Q+    V P+
Sbjct: 491 V----------------------MDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPD 528

Query: 532 AYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT--SIRLTKFIFKFH---SSSSA 586
             TY V++  FCK +NI    +L ++     ++L  H+  S+     I  FH       A
Sbjct: 529 IMTYNVLINGFCKAKNINGAFKLFRE-----LQLKGHSPDSVTYGTLIDGFHRVDREEDA 583

Query: 587 VNQLVEMCNLGLIP 600
              L +M   G  P
Sbjct: 584 FRVLDQMVKNGCTP 597



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 111/504 (22%), Positives = 222/504 (44%), Gaps = 33/504 (6%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           ++  Y   ++ +  +I  + R   R++ V+    ++ + G       + + +R +    M
Sbjct: 298 EKEGYVLGIKGYSSLIDGLFR-AKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGM 356

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNI 190
               L   ++M + G +P+T+  N ++     +G +D    L +++ K    P   ++ I
Sbjct: 357 VDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTI 416

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL-----LGL 245
            +C +C+   +   + +   M   G  P++  F  L++  CK G + EA  L     +G 
Sbjct: 417 LICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGK 476

Query: 246 MITLGTSLSVNAWTVLIDGFRR--LRRLDMAGYLWE------KMVQNGCSPNVVTYTSLI 297
             +L   LS  A  V+     +  + RL  +G + +      ++  +G  P+++TY  LI
Sbjct: 477 NPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLI 536

Query: 298 KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
            GF +AK  + AF     L+ +GH+PD V +  LID   ++   +DA  V D +++    
Sbjct: 537 NGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCT 596

Query: 358 PDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVK 413
           P S  +  L++  C  G+    FSL  K +  L  + D  +   L     + G   +AV+
Sbjct: 597 PSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETL--KLAEEHFEKGELEKAVR 654

Query: 414 LYNTMLDKGFTPDNYS---FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
               +L+  F  +N+    +   L GLC AR+ +EA+ ++  +      VN      +++
Sbjct: 655 ---CLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLIN 711

Query: 471 RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
            L + G    A+ +F   + + + L        +R L+   + + A  L ++M       
Sbjct: 712 GLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHALDLLNRMNSAGYDL 771

Query: 531 NAYTY---RVMLLSFCKERNIKMV 551
           + Y +   +  LLS  K + ++ V
Sbjct: 772 DEYLHHRIKSYLLSVWKAQEMENV 795



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 119/289 (41%), Gaps = 23/289 (7%)

Query: 326 VFHNVLIDCLSKMGSYDDALDVYDGLLE------LKLVPDSYTFCSLLSTVCLSG----- 374
           V HN++ID L+K    DD  D Y  +LE      +++ P   TF  L++    SG     
Sbjct: 97  VTHNLVIDMLAK----DDGFDTYWKILEELKNSNIQIPPP--TFSVLIAAYAKSGMAEKA 150

Query: 375 --RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
              F  +    C    + D+  YN++L    +      A+ +YN ML   + P+  +FV 
Sbjct: 151 VESFGKMKDFGC----KPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVI 206

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           LL GLC   K D+A+ ++  +       N  ++T I+  L +A R     +L     V  
Sbjct: 207 LLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSG 266

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVK 552
              D ++    + G  + G+ +EA+ L    +          Y  ++    + +    V+
Sbjct: 267 CCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQ 326

Query: 553 RLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
              + +  A IE D      L +   +      A+N L +M   GL PD
Sbjct: 327 EWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPD 375


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 127/497 (25%), Positives = 228/497 (45%), Gaps = 20/497 (4%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFK---IGRV-DLGIKVLKETQLPNFLSFNIALCNLCK 197
            +EM   G  P+T   N +++   K     RV DL  ++ K   +P   +  + +  LC+
Sbjct: 399 LNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCR 458

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              + +   V  +MV  G  PN  ++  L+    + GR  EA ++L +M   G    V  
Sbjct: 459 HGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLC 518

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  +I G  + R+++ A     +M++ G  PNV TY +LI G+ ++    +A  +   + 
Sbjct: 519 YNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEML 578

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G AP+ V    LID   K GS  +A  ++  +L   + PD  T+ +L+  +  +G+  
Sbjct: 579 GCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQ 638

Query: 378 LLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
              +L+     +    D+  YN+++S FCK G   +A +L+  M  KG +P+  ++  L+
Sbjct: 639 GAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALI 698

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            GLC A +I+ A  ++ GI     A NA  +  I+D   ++G   KA +LF    ++  P
Sbjct: 699 NGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVP 758

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
            D   Y+  I G  + G TE+A  L+ +         + +   ++  FCK   +    +L
Sbjct: 759 PDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTS-SLNALMDGFCKSGKVIEANQL 817

Query: 555 LQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDET 614
           L+D++D  ++ D+ T   L  +  K      A    V+M    L+P+             
Sbjct: 818 LEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPN------------A 865

Query: 615 MTPVSLFDGFVPCERRA 631
           +T  +L  G+    RR+
Sbjct: 866 LTYTALLSGYNMAGRRS 882



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 125/525 (23%), Positives = 231/525 (44%), Gaps = 54/525 (10%)

Query: 82  DVQSFDHMIS--VVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVL 139
           D Q++++MI   +  + T R   V+ ++ E+ +   V  A T  + +    R   +G + 
Sbjct: 410 DTQTYNNMIEGYLKEQNTSR---VKDLLSEMKKSNLVPTAYTCGMIINGLCR---HGSIE 463

Query: 140 EA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIAL 192
           +A   F+ M   G  PN      ++    + GR    +++LK    +   P+ L +N  +
Sbjct: 464 DASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVI 523

Query: 193 CNLCKLNDVSNVKDVIGMMVRKGFYPNV--------------------RMFEILLNC--- 229
             LCK   +   KD +  M+ +G  PNV                    R F+ +L C   
Sbjct: 524 IGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIA 583

Query: 230 ------------FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
                       +CK G   EA  +   M+       V  ++ LI G  R  +L  A  L
Sbjct: 584 PNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMEL 643

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
             + ++ G  P+V TY S+I GF +      AF   + +  +G +P+++ +N LI+ L K
Sbjct: 644 LSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCK 703

Query: 338 MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVV 394
            G  + A +++DG+    L  ++ T+ +++   C SG  S   +L   + ++    D  V
Sbjct: 704 AGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFV 763

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           Y+AL+    K G   +A+ L+   + KGF   + S   L+ G C + K+ EA  + + +V
Sbjct: 764 YSALIDGCRKEGNTEKALSLFLESVQKGFASTS-SLNALMDGFCKSGKVIEANQLLEDMV 822

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
             +   +   +T ++D   + G   +A Q F          + ++YT  + G    GR  
Sbjct: 823 DKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRS 882

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           E + L+ +M    + P+  T+ VM+ +  KE +     +L+ D++
Sbjct: 883 EMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDML 927



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 109/465 (23%), Positives = 213/465 (45%), Gaps = 51/465 (10%)

Query: 126 LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ---- 181
           L ++WR   Y  +LEA           + +    +++  F+ G    G ++L E +    
Sbjct: 217 LELFWR--FYNGMLEA-------NVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGC 267

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
            P+ +++N+ +  LC+  +V    ++  +M +KG   +V  + IL++ F K  R  EA  
Sbjct: 268 SPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKL 327

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRR--------------LRR----------------- 270
           +L  M + G      A+T LIDGF R              L R                 
Sbjct: 328 MLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVC 387

Query: 271 ----LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
               ++ A  L  +M+  G  P+  TY ++I+G+++ +  S     L  ++     P   
Sbjct: 388 KFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAY 447

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL 386
              ++I+ L + GS +DA  V++ ++ L + P++  + +L+      GRF    +++  +
Sbjct: 448 TCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVM 507

Query: 387 E---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
           +   V+ D++ YN+++   CK+    +A      M+++G  P+ Y++  L+ G C + ++
Sbjct: 508 DKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEM 567

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
             A   ++ ++    A N  V TA++D   + G   +A  +FR  +      DV +Y+  
Sbjct: 568 QVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSAL 627

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
           I GLL  G+ + A  L S+     + P+ +TY  ++  FCK+  I
Sbjct: 628 IHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGI 672



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 129/539 (23%), Positives = 236/539 (43%), Gaps = 44/539 (8%)

Query: 48  LAPHIVHSTL---LNCPSDLIALSFFIWCAKQRDYFHDVQSFD--HMISVVTRLTGRFET 102
           L+P +VHS +   +N P  L  L FF W   Q  +   +QSF    +I   +RL  R ++
Sbjct: 65  LSPDVVHSVITKQVNDPKRL--LDFFNWVQFQMGFSQKLQSFSILALILCNSRLFSRADS 122

Query: 103 VRGIVGELARVG------CVIKA-QTFLLFLRIYW-------RGEMYGMVLEAFDEMGRF 148
           V   +  ++  G       +IK+ + F L             RG ++ ++++ + + G F
Sbjct: 123 VVNQMIMMSSGGYSEILDSLIKSCKEFDLNNVNGNENSNNNDRGVVFELLIDGYKKKGLF 182

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVI 208
               + F                LG K  +   +   L  N  L +L K N +       
Sbjct: 183 DEAVSFF----------------LGAK--RNGFVVGLLCCNGLLSDLLKANKLELFWRFY 224

Query: 209 GMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRL 268
             M+      +V  +  L+N   + G   E  +LL  M   G S S+  + V+I G  R 
Sbjct: 225 NGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRA 284

Query: 269 RRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH 328
             +D A  L + M + G   +V TY+ LI GF + K  + A   L+ + S+G  P  V +
Sbjct: 285 GEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAY 344

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF----SLLPKLVC 384
             LID   + G   +A  V + +L   +  + +T+ +L+  VC  G      +LL +++ 
Sbjct: 345 TALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIM 404

Query: 385 GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
            + ++ D   YN ++  + K    ++   L + M      P  Y+   ++ GLC    I+
Sbjct: 405 -VGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIE 463

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
           +A  V++ +V      NA ++T ++   ++ GR  +A+++ +    +    DV+ Y   I
Sbjct: 464 DASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVI 523

Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
            GL +  + EEA     +M    + PN YTY  ++  +CK   +++  R  ++++   I
Sbjct: 524 IGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGI 582



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 89/394 (22%), Positives = 164/394 (41%), Gaps = 3/394 (0%)

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
           R GF   +     LL+   K  ++   ++    M+       V  +T LI+   R     
Sbjct: 194 RNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAK 253

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
               L  +M + GCSP++VTY  +I G   A     AF    +++ +G   D+  +++LI
Sbjct: 254 EGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILI 313

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL---SGRFSLLPKLVCGLEVE 389
           D   K     +A  + + +    L P    + +L+        SG    + + +    V+
Sbjct: 314 DGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVK 373

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            +L  YNAL+   CK G   +A  L N M+  G  PD  ++  ++ G    +      ++
Sbjct: 374 LNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDL 433

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
              +  +N    A+    I++ L   G    A ++F   +      + V YT  I+G ++
Sbjct: 434 LSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQ 493

Query: 510 GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
            GR +EA  +   M    V P+   Y  +++  CK R ++  K  L ++I+  ++ + +T
Sbjct: 494 EGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYT 553

Query: 570 SIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
              L     K      A     EM   G+ P+++
Sbjct: 554 YGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDV 587



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 86/391 (21%), Positives = 171/391 (43%), Gaps = 10/391 (2%)

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF-RRLRRLDM 273
           GF   ++ F IL    C     + A  ++  MI +    S   ++ ++D   +  +  D+
Sbjct: 96  GFSQKLQSFSILALILCNSRLFSRADSVVNQMIMM----SSGGYSEILDSLIKSCKEFDL 151

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
                 +   N  +   V +  LI G+ +  +F  A SF    +  G    L+  N L+ 
Sbjct: 152 NNVNGNENSNN--NDRGVVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLS 209

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA--- 390
            L K    +     Y+G+LE  ++ D YT+  L++    +G      +L+  +E +    
Sbjct: 210 DLLKANKLELFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSP 269

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
            LV YN ++   C+AG  ++A +L   M  KG   D +++  L+ G    ++  EA  + 
Sbjct: 270 SLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLML 329

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
           + +           +TA++D  +  G   +A ++    +     L++ +Y   ++G+ + 
Sbjct: 330 EEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKF 389

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
           G  E+A  L ++M  + + P+  TY  M+  + KE+N   VK LL ++  + +    +T 
Sbjct: 390 GDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTC 449

Query: 571 IRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
             +   + +  S   A      M +LG+ P+
Sbjct: 450 GMIINGLCRHGSIEDASRVFEIMVSLGVKPN 480



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 83/363 (22%), Positives = 150/363 (41%), Gaps = 38/363 (10%)

Query: 76   QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
            Q+    ++ +++ +I+ + +  G  E  R +   +   G    A T+   +  Y +    
Sbjct: 684  QKGISPNIITYNALINGLCK-AGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNL 742

Query: 136  GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNL 195
                  FDEM   G  P++F  + ++D   K G  +  + +  E+               
Sbjct: 743  SKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLES--------------- 787

Query: 196  CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
                            V+KGF  +      L++ FCK G++ EA QLL  M+        
Sbjct: 788  ----------------VQKGF-ASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDH 830

Query: 256  NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
              +T+LID   +   L  A   +  M +    PN +TYT+L+ G+  A   S  F+  D 
Sbjct: 831  VTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDE 890

Query: 316  LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS-LLSTVCLSG 374
            + ++   PD V  +V+ID   K G +   L + D +L+ K    S   C  L+  +C   
Sbjct: 891  MIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLK-KGGNVSKNVCHVLIDPLCRKE 949

Query: 375  RFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
              S + K++  +E +     L   + L+  F KAG  + A ++  +M+   + PD+    
Sbjct: 950  HVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELN 1009

Query: 432  GLL 434
             L+
Sbjct: 1010 DLI 1012



 Score = 42.4 bits (98), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 47/218 (21%), Positives = 90/218 (41%), Gaps = 7/218 (3%)

Query: 136  GMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG----IKVLKETQLPNFLSF 188
            G V+EA    ++M      P+     I++D   K G +       + + K   +PN L++
Sbjct: 809  GKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTY 868

Query: 189  NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
               L         S +  +   M+ K   P+   + ++++   K G   +  +L+  M+ 
Sbjct: 869  TALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLK 928

Query: 249  LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
             G ++S N   VLID   R   +     + EK+ + G + ++ T ++L++ F +A     
Sbjct: 929  KGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDG 988

Query: 309  AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALD 346
            A   L  +      PD    N LI+        ++A D
Sbjct: 989  AARVLKSMVRFKWVPDSTELNDLINVEQDSTDSENAGD 1026


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 124/504 (24%), Positives = 232/504 (46%), Gaps = 46/504 (9%)

Query: 76  QRDYF---HDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRG 132
           Q D F   H+V S + +I+ + RL+   +    ++G++ ++G    A TF   +      
Sbjct: 121 QMDLFGVTHNVYSLNVLINCLCRLS-HVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNE 179

Query: 133 EMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSF 188
                 +  F+EM   G  PN  + N V++ L K G   + ++V ++ +     PN +++
Sbjct: 180 GKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTY 239

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           N  + +LCK   V+   + +  MV +G  P+V  +  +L+ FC +G++ EA +L   M+ 
Sbjct: 240 NTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVG 299

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
                    + +L+DG  +   +  A  + E M + G  PN  TY +L+ G+        
Sbjct: 300 RNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDE 359

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A   L ++  +G AP+L  +N+LI+   K    ++A  +   + E  L PD+ T+ +L+ 
Sbjct: 360 AIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQ 419

Query: 369 TVCLSGRFSL---LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
            +C  GR      L K +C   +  DL+ Y+ LL  FCK G  ++A+KL   M ++   P
Sbjct: 420 GLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKP 479

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           +   +  L+RG                                   +  AG+   A +LF
Sbjct: 480 NIILYTILIRG-----------------------------------MFIAGKLEVAKELF 504

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
            +   +    D+ +Y V I+GLL+ G ++EAY  + +M+     P++ +Y V++  F + 
Sbjct: 505 SKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQN 564

Query: 546 RNIKMVKRLLQDVIDARIELDYHT 569
           ++     +L+ +++  R   D  T
Sbjct: 565 QDSSTAIQLIDEMVGKRFSADSST 588



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/449 (24%), Positives = 210/449 (46%), Gaps = 7/449 (1%)

Query: 184 NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
           N  S N+ +  LC+L+ V     V+G M + G  P+   F  L+N  C  G+I EA  L 
Sbjct: 130 NVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLF 189

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
             M+  G   +V ++  +I+G  +     MA  ++ KM QN   PNVVTY ++I    + 
Sbjct: 190 NEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKD 249

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
           ++ + A  FL  +   G  PD+V +N ++     +G  ++A  ++  ++   ++PD+ TF
Sbjct: 250 RLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTF 309

Query: 364 CSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
             L+  +C  G  S    + + +     E +   YNAL+  +C     ++A+K+   M+ 
Sbjct: 310 NILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIG 369

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
           KG  P+  S+  L+ G C +++++EA  +   +   N   +   ++ ++  L + GR  +
Sbjct: 370 KGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPRE 429

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
           A+ LF+         D+++Y++ + G  + G  +EA  L  +M    + PN   Y +++ 
Sbjct: 430 ALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIR 489

Query: 541 SFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
                  +++ K L   +    I  D  T   + K + K   S  A     +M + G +P
Sbjct: 490 GMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLP 549

Query: 601 DEMWRKL---GLLSDE-TMTPVSLFDGFV 625
           D     +   G L ++ + T + L D  V
Sbjct: 550 DSCSYNVIIQGFLQNQDSSTAIQLIDEMV 578



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/419 (25%), Positives = 199/419 (47%), Gaps = 9/419 (2%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVI 208
           GF  NT     + D L    R+      ++    P+ + F   L ++ K    S+   + 
Sbjct: 66  GFGSNTSNDISIDDALTSFYRM------VRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLC 119

Query: 209 GMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRL 268
             M   G   NV    +L+NC C++  +  A  ++G M  LG       +  LI+G    
Sbjct: 120 NQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNE 179

Query: 269 RRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH 328
            ++  A  L+ +MV +G  PNV++Y ++I G  +     +A      +E     P++V +
Sbjct: 180 GKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTY 239

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCG 385
           N +ID L K    ++A++    +++  + PD  T+ ++L   C  G+ +   +L   + G
Sbjct: 240 NTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVG 299

Query: 386 LEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
             V  D V +N L+   CK G  ++A  +  TM +KG  P+ Y++  L+ G C   ++DE
Sbjct: 300 RNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDE 359

Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
           AI V   ++    A N   +  +++   ++ R ++A +L      +    D V+Y+  ++
Sbjct: 360 AIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQ 419

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
           GL + GR  EA  L+ +M    + P+   Y ++L  FCK  ++    +LL+++ + RI+
Sbjct: 420 GLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIK 478



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 86/362 (23%), Positives = 176/362 (48%), Gaps = 16/362 (4%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE----TQLPNFLSFNIALC 193
            +E   EM   G  P+    N ++     +G+++   ++ KE      +P+ ++FNI + 
Sbjct: 255 AVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVD 314

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
            LCK   VS  + V   M  KG  PN   +  L++ +C   ++ EA ++LG+MI  G + 
Sbjct: 315 GLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAP 374

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
           +++++ +LI+G+ + +R++ A  L  +M +   +P+ VTY++L++G  +      A +  
Sbjct: 375 NLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLF 434

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
             + S G  PDL+ +++L+D   K G  D+AL +   + E ++ P+   +  L+  + ++
Sbjct: 435 KEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIA 494

Query: 374 GRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           G+  +  +L   L  +    D+  YN ++    K G  ++A + +  M D GF PD+ S+
Sbjct: 495 GKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSY 554

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV---------HTAIVDRLIEAGRCHKA 481
             +++G    +    AI +   +V    + ++           H  I+ R +     H  
Sbjct: 555 NVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLDLESHDEIISRFMRGSSQHTK 614

Query: 482 IQ 483
           + 
Sbjct: 615 MN 616



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 48/210 (22%), Positives = 80/210 (38%), Gaps = 35/210 (16%)

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
           +V +   L    K    + AV L N M   G T + YS   L+  LC    +D A++V  
Sbjct: 96  VVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMG 155

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
                                          ++F+  I      D +++   I GL   G
Sbjct: 156 -------------------------------KMFKLGIQP----DAITFNTLINGLCNEG 180

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSI 571
           + +EA  L+++M      PN  +Y  ++   CK  N  M  R+ + +   R + +  T  
Sbjct: 181 KIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYN 240

Query: 572 RLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            +   + K    + AV  L EM + G+ PD
Sbjct: 241 TIIDSLCKDRLVNEAVEFLSEMVDRGIPPD 270


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 122/495 (24%), Positives = 222/495 (44%), Gaps = 7/495 (1%)

Query: 117 IKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV 176
           + A T  + +  Y +   +        EM +    P+    N+++D  F+ G VD  I +
Sbjct: 155 VNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIAL 214

Query: 177 LKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCK 232
           +         P  +++N  L  LCK       K+V   M +    P+VR F IL+  FC+
Sbjct: 215 VDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCR 274

Query: 233 MGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVT 292
           +G + EA +    M     +  V +++ LI  F R   +D AG    +M   G  P+ V 
Sbjct: 275 VGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVI 334

Query: 293 YTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
           YT +I GF  A   S A    D +   G  PD+V +N L++ L K     DA  + + + 
Sbjct: 335 YTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEME 394

Query: 353 ELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPN 409
           E  + PD  TF +L+   C  G F    +L   L    +  D+V YN+L+   C+ G   
Sbjct: 395 ERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLA 454

Query: 410 QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
           +A +L++ M  +   P++ ++  L+   C   ++++A      +V      N   + +I+
Sbjct: 455 KANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSII 514

Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
                +G   K  Q  ++   +    D++++   I G ++      A+ +++ M+   V 
Sbjct: 515 KGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVR 574

Query: 530 PNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQ 589
           P+A TY +++  F ++ N++   R+ + + D+ IE D +T + L        +S  A   
Sbjct: 575 PDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQL 634

Query: 590 LVEMCNLGLIPDEMW 604
             EM + G  PD+ +
Sbjct: 635 HDEMIHRGFAPDDKF 649



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/465 (22%), Positives = 207/465 (44%), Gaps = 10/465 (2%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           ++R  F DV + + +I    R  G  +    +V  +A  G      T+   L+   +   
Sbjct: 184 EKRCVFPDVVTHNVLIDARFR-AGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRR 242

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNI 190
           +    E F  M +    P+  + NI++    ++G V   +K  KE Q     P+ +SF+ 
Sbjct: 243 FDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSC 302

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +    +  ++ +    +  M   G  P+  ++ +++  FC+ G ++EA ++   M+  G
Sbjct: 303 LIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFG 362

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
               V  +  L++G  +  RL  A  L  +M + G +P++ T+T+LI G+     F  A 
Sbjct: 363 CLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENAL 422

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
              D L  +   PD+V +N LID + + G    A +++D +   +++P+  T+  L+ + 
Sbjct: 423 QLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSH 482

Query: 371 CLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
           C  G+    F  L ++V    +  ++  YN+++  +C++G   +  +    M      PD
Sbjct: 483 CEKGQVEDAFGFLDEMVKKGNL-PNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPD 541

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
             +F  L+ G      +  A NV+  +       +A  +  I++   E G    A ++F+
Sbjct: 542 LITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFK 601

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
                    D  +Y   I G +  G +++A+ L+ +M H    P+
Sbjct: 602 GMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPD 646



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/366 (22%), Positives = 166/366 (45%), Gaps = 5/366 (1%)

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
           ++++  ++     P  ++F++L+  + +  +  EA++   L++     +  +A   L+  
Sbjct: 72  REIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAV 131

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
             R     +A   +  ++ +    N  T   ++  + +   F  A + +  +E     PD
Sbjct: 132 LSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPD 191

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVC 384
           +V HNVLID   + G  D A+ + D +    L P   T+ S+L  +C   RF    ++  
Sbjct: 192 VVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFR 251

Query: 385 GLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
            ++   V  D+  +N L+  FC+ G   +AVK Y  M  +  TPD  SF  L+ GL   R
Sbjct: 252 TMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLI-GLFSRR 310

Query: 442 -KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSY 500
            ++D A    + +       +  ++T ++     AG   +A+++    +      DVV+Y
Sbjct: 311 GEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTY 370

Query: 501 TVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
              + GL +  R  +A  L ++M+   V P+  T+  ++  +C++ N +   +L   ++ 
Sbjct: 371 NTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLR 430

Query: 561 ARIELD 566
            R+  D
Sbjct: 431 QRLRPD 436


>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
 gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g31850, chloroplastic; AltName: Full=Protein PROTON
           GRADIENT REGULATION 3; Flags: Precursor
 gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
 gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
 gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
          Length = 1112

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 137/561 (24%), Positives = 250/561 (44%), Gaps = 49/561 (8%)

Query: 45  PIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVR 104
           P + +   V   L + P    + S+F   A   +  H  ++ ++M+  + R+ G+ E + 
Sbjct: 80  PDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEAL-RVDGKLEEMA 138

Query: 105 GIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA---FDEMGRFGFTPNTFARNIVM 161
            +   + +   +IK  T   +L I+    + G + +A     +M  FGF  N ++ N ++
Sbjct: 139 YVFDLMQKR--IIKRDTNT-YLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLI 195

Query: 162 DVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFY 217
            +L K       ++V +   L    P+  +++  +  L K  D+ +V  ++  M   G  
Sbjct: 196 HLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLK 255

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
           PNV  F I +    + G+I EAY++L  M   G    V  +TVLID     R+LD A  +
Sbjct: 256 PNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEV 315

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
           +EKM      P+ VTY +L+  F + +       F   +E +GH PD+V   +L+D L K
Sbjct: 316 FEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCK 375

Query: 338 MGSYDDALDVYDGLLELKLVPDSYTF----CSLLSTVCLSGRFSLLPKL----------- 382
            G++ +A D  D + +  ++P+ +T+    C LL    L     L   +           
Sbjct: 376 AGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYT 435

Query: 383 --------------VCGLE---------VEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
                         V  LE         +  ++V  NA L    KAG   +A +++  + 
Sbjct: 436 YIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLK 495

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
           D G  PD+ ++  +++      +IDEAI +   ++ N    +  V  ++++ L +A R  
Sbjct: 496 DIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVD 555

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
           +A ++F R    K    VV+Y   + GL + G+ +EA  L+  M     PPN  T+  + 
Sbjct: 556 EAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLF 615

Query: 540 LSFCKERNIKMVKRLLQDVID 560
              CK   + +  ++L  ++D
Sbjct: 616 DCLCKNDEVTLALKMLFKMMD 636



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 117/516 (22%), Positives = 215/516 (41%), Gaps = 12/516 (2%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
            GR    + I   L  +G V  + T+ + ++ Y +       ++   EM   G  P+   
Sbjct: 481 AGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIV 540

Query: 157 RNIVMDVLFKIGRVDLGIKV---LKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N +++ L+K  RVD   K+   +KE +L P  +++N  L  L K   +    ++   MV
Sbjct: 541 VNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMV 600

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
           +KG  PN   F  L +C CK   +  A ++L  M+ +G    V  +  +I G  +  ++ 
Sbjct: 601 QKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVK 660

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL-DMLESEGHAPDLVFHNVL 331
            A   + +M +    P+ VT  +L+ G ++A +   A+  + + L +    P  +F   L
Sbjct: 661 EAMCFFHQM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDL 719

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYT-FCSLLSTVC----LSGRFSLLPKLVCGL 386
           I  +      D+A+   + L+   +  D  +    ++   C    +SG  +L  K    L
Sbjct: 720 IGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDL 779

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
            V+  L  YN L+    +A     A  ++  +   G  PD  ++  LL     + KIDE 
Sbjct: 780 GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDEL 839

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK-YPLDVVSYTVAIR 505
             +Y+ +  +    N   H  ++  L++AG    A+ L+   + ++ +     +Y   I 
Sbjct: 840 FELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLID 899

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
           GL + GR  EA  L+  M      PN   Y +++  F K         L + ++   +  
Sbjct: 900 GLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRP 959

Query: 566 DYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           D  T   L   +         ++   E+   GL PD
Sbjct: 960 DLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPD 995



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 112/479 (23%), Positives = 193/479 (40%), Gaps = 48/479 (10%)

Query: 138  VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALC 193
             +E F+ M + G  PNT   N + D L K   V L +K+L +      +P+  ++N  + 
Sbjct: 592  AIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIF 651

Query: 194  NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
             L K   V         M +K  YP+      LL    K   I +AY+++   +      
Sbjct: 652  GLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQ 710

Query: 254  SVNA-WTVLIDGFRRLRRLDMAGYLWEKMVQNG--------------------------- 285
              N  W  LI        +D A    E++V NG                           
Sbjct: 711  PANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGART 770

Query: 286  ----------CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
                        P + TY  LI G +EA M  IA      ++S G  PD+  +N L+D  
Sbjct: 771  LFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAY 830

Query: 336  SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEAD 391
             K G  D+  ++Y  +   +   ++ T   ++S +  +G       L   L+   +    
Sbjct: 831  GKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPT 890

Query: 392  LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
               Y  L+    K+G   +A +L+  MLD G  P+   +  L+ G   A + D A  +++
Sbjct: 891  ACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFK 950

Query: 452  GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
             +V      +   ++ +VD L   GR  + +  F+         DVV Y + I GL +  
Sbjct: 951  RMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSH 1010

Query: 512  RTEEAYILYSQMK-HIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
            R EEA +L+++MK    + P+ YTY  ++L+      ++   ++  ++  A +E +  T
Sbjct: 1011 RLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFT 1069



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 129/571 (22%), Positives = 231/571 (40%), Gaps = 75/571 (13%)

Query: 49  APHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLT--GRF------ 100
            P +V  T+L    D +  +  + CAK+   F  +++  H    VT +T   RF      
Sbjct: 290 GPDVVTYTVL---IDALCTARKLDCAKE--VFEKMKTGRHKPDRVTYITLLDRFSDNRDL 344

Query: 101 ETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIV 160
           ++V+    E+ + G V    TF + +    +   +G   +  D M   G  PN    N +
Sbjct: 345 DSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTL 404

Query: 161 MDVLFKIGRVD-----------LGIKVLKETQL--------------------------- 182
           +  L ++ R+D           LG+K    T +                           
Sbjct: 405 ICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGI 464

Query: 183 -PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
            PN ++ N +L +L K       K +   +   G  P+   + +++ C+ K+G I EA +
Sbjct: 465 APNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIK 524

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           LL  M+  G    V     LI+   +  R+D A  ++ +M +    P VVTY +L+ G  
Sbjct: 525 LLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLG 584

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           +      A    + +  +G  P+ +  N L DCL K      AL +   ++++  VPD +
Sbjct: 585 KNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVF 644

Query: 362 TFCSLLSTVCLSGR-------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVK- 413
           T+ +++  +  +G+       F  + KL     V  D V    LL    KA     A K 
Sbjct: 645 TYNTIIFGLVKNGQVKEAMCFFHQMKKL-----VYPDFVTLCTLLPGVVKASLIEDAYKI 699

Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
           + N + +    P N  +  L+  +     ID A++  + +V N    +     +I+  +I
Sbjct: 700 ITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGD---SILVPII 756

Query: 474 EAGRCHKAIQLFRRAIVEKYPLD------VVSYTVAIRGLLEGGRTEEAYILYSQMKHIA 527
                H  +    R + EK+  D      + +Y + I GLLE    E A  ++ Q+K   
Sbjct: 757 RYSCKHNNVS-GARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTG 815

Query: 528 VPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
             P+  TY  +L ++ K   I  +  L +++
Sbjct: 816 CIPDVATYNFLLDAYGKSGKIDELFELYKEM 846



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 94/368 (25%), Positives = 153/368 (41%), Gaps = 44/368 (11%)

Query: 113  VGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDL 172
            +G   K  T+ L +      +M  +  + F ++   G  P+    N ++D   K G++D 
Sbjct: 779  LGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDE 838

Query: 173  GIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVI-GMMVRKGFYPNVRMFEILL 227
              ++ KE        N ++ NI +  L K  +V +  D+   +M  + F P         
Sbjct: 839  LFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTA------- 891

Query: 228  NCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCS 287
               C  G                          LIDG  +  RL  A  L+E M+  GC 
Sbjct: 892  ---CTYGP-------------------------LIDGLSKSGRLYEAKQLFEGMLDYGCR 923

Query: 288  PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
            PN   Y  LI GF +A     A +    +  EG  PDL  ++VL+DCL  +G  D+ L  
Sbjct: 924  PNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHY 983

Query: 348  YDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLVCGLEVEADLVVYNALLSYFC 403
            +  L E  L PD   +  +++ +  S R      L  ++     +  DL  YN+L+    
Sbjct: 984  FKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLG 1043

Query: 404  KAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAH 463
             AG   +A K+YN +   G  P+ ++F  L+RG   + K + A  VYQ +V    + N  
Sbjct: 1044 IAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTG 1103

Query: 464  VHTAIVDR 471
             +  + +R
Sbjct: 1104 TYEQLPNR 1111



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 101/492 (20%), Positives = 207/492 (42%), Gaps = 46/492 (9%)

Query: 97   TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
             G+ +    +   + + GC     TF        + +   + L+   +M   G  P+ F 
Sbjct: 586  NGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFT 645

Query: 157  RNIVMDVLFKIGRVDLGI---KVLKETQLPNFLSFNIALCNLCKLNDVSNV--------- 204
             N ++  L K G+V   +     +K+   P+F++    L  + K + + +          
Sbjct: 646  YNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLY 705

Query: 205  -----------KDVIGMMVRKGFYPNVRMFE--ILLNCFCKMG---------------RI 236
                       +D+IG ++ +    N   F   ++ N  C+ G                +
Sbjct: 706  NCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNV 765

Query: 237  AEAYQLL-GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
            + A  L       LG    +  + +LI G      +++A  ++ ++   GC P+V TY  
Sbjct: 766  SGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNF 825

Query: 296  LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVY-DGLLEL 354
            L+  + ++      F     + +     + + HN++I  L K G+ DDALD+Y D + + 
Sbjct: 826  LLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDR 885

Query: 355  KLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQA 411
               P + T+  L+  +  SGR     +L  G+       +  +YN L++ F KAG  + A
Sbjct: 886  DFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAA 945

Query: 412  VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
              L+  M+ +G  PD  ++  L+  LC   ++DE ++ ++ +  +    +   +  I++ 
Sbjct: 946  CALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIING 1005

Query: 472  LIEAGRCHKAIQLFRRAIVEK-YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
            L ++ R  +A+ LF      +    D+ +Y   I  L   G  EEA  +Y++++   + P
Sbjct: 1006 LGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEP 1065

Query: 531  NAYTYRVMLLSF 542
            N +T+  ++  +
Sbjct: 1066 NVFTFNALIRGY 1077



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 94/383 (24%), Positives = 161/383 (42%), Gaps = 55/383 (14%)

Query: 163  VLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
             LF+    DLG++       P   ++N+ +  L + + +   +DV   +   G  P+V  
Sbjct: 770  TLFEKFTKDLGVQ-------PKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVAT 822

Query: 223  FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW-EKM 281
            +  LL+ + K G+I E ++L   M T     +     ++I G  +   +D A  L+ + M
Sbjct: 823  YNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLM 882

Query: 282  VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
                 SP   TY  LI G  ++     A    + +   G  P+   +N+LI+   K G  
Sbjct: 883  SDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEA 942

Query: 342  DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-------FSLLPKLVCGLEVEADLVV 394
            D A  ++  +++  + PD  T+  L+  +C+ GR       F  L +   GL    D+V 
Sbjct: 943  DAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKE--SGLN--PDVVC 998

Query: 395  YNALLSYFCKAGFPNQAVKLYNTM-LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            YN +++   K+    +A+ L+N M   +G TPD Y++  L+  L  A  ++EA  +Y  I
Sbjct: 999  YNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEI 1058

Query: 454  VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
                                            +RA +E    +V ++   IRG    G+ 
Sbjct: 1059 --------------------------------QRAGLEP---NVFTFNALIRGYSLSGKP 1083

Query: 514  EEAYILYSQMKHIAVPPNAYTYR 536
            E AY +Y  M      PN  TY 
Sbjct: 1084 EHAYAVYQTMVTGGFSPNTGTYE 1106


>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Glycine max]
          Length = 1024

 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 132/498 (26%), Positives = 232/498 (46%), Gaps = 45/498 (9%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G+    + I+  +   GC    + F   +  Y +   Y    + F +M + G  P     
Sbjct: 321 GQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLY 380

Query: 158 NIVM------------DVLFKIGR-----VDLGIKVLKETQLPNFLSFNIALCNLCKLND 200
           NI +            D+L    +     +DLG+ VL +  + NF     A C LC    
Sbjct: 381 NIFIGSICSNEELPGSDLLELAEKAYSEMLDLGV-VLNKVNVSNF-----ARC-LCGAGK 433

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
                ++I  M+ KGF P+   +  ++   C   ++ +A+ L   M   G   SV  +T+
Sbjct: 434 FDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTI 493

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           LID F +   +  A   +++M+++ C+PNVVTYTSLI  +++A+    A    +M+  EG
Sbjct: 494 LIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEG 553

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVY---DGLLE-------LKL------VPDSYTFC 364
             P++V +  LID   K G  D A  +Y    G +E        KL       P+  T+ 
Sbjct: 554 SKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYG 613

Query: 365 SLLSTVCLSGRFSLLPKLVCGLEV---EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
           +L+  +C + R     +L+  + V   E + +VY+AL+  FCK G    A +++  M ++
Sbjct: 614 ALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSER 673

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
           G+ P+ Y++  L+  L   +++D  + V   ++ N+   N  ++T ++D L + G+  +A
Sbjct: 674 GYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEA 733

Query: 482 IQL-FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
            +L  +   V  YP +V++YT  I G  + G+ E+   LY  M      PN  TYRV++ 
Sbjct: 734 YRLMLKMEEVGCYP-NVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLIN 792

Query: 541 SFCKERNIKMVKRLLQDV 558
             C    +    RLL ++
Sbjct: 793 HCCSTGLLDEAHRLLDEM 810



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 122/576 (21%), Positives = 235/576 (40%), Gaps = 64/576 (11%)

Query: 67  LSFFIWCAKQRDYFHDVQSFDHMISVVT-------RLTGRF---------ETVRGIV--- 107
           + FF+W ++Q  Y H    ++ +I ++        R++ +F         E +R ++   
Sbjct: 117 VEFFLWASRQIGYSHTPVVYNALIELLCCNAVNNDRVSHKFLMQIRDDDRELLRKLLNFL 176

Query: 108 -----------------GELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGF 150
                            G L   G      T+   ++++ R +          EM   GF
Sbjct: 177 IQKCCRNGMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGF 236

Query: 151 TPNTFARNIVMDVLFKIGRVDLGIKVL-KETQLPNFLSFNIALCNLCKLNDVSNVKDVIG 209
             +          L K GR    + +L KE  +P+ + +N  +  LC+ +      D++ 
Sbjct: 237 RMDGCTLGCFAYSLCKAGRCGDALSLLEKEEFVPDTVFYNRMVSGLCEASLFQEAMDILD 296

Query: 210 MMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLR 269
            M      PNV  + ILL+     G++    ++L +M+T G   +   +  L+  + + R
Sbjct: 297 RMRSISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSR 356

Query: 270 RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE---SEGHAPDLV 326
               A  L++KM++ GC P  + Y   I      +        L++ E   SE     +V
Sbjct: 357 DYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELP-GSDLLELAEKAYSEMLDLGVV 415

Query: 327 FHNVLID----CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LL 379
            + V +     CL   G +D A ++   ++    VPD  T+  ++  +C + +     LL
Sbjct: 416 LNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLL 475

Query: 380 PKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
            + +    +   +  Y  L+  FCKAG   QA   ++ ML    TP+  ++  L+     
Sbjct: 476 FEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLK 535

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR--AIVEKYPLD- 496
           ARK+ +A  +++ +++     N   +TA++D   +AG+  KA Q++ R    +E   +D 
Sbjct: 536 ARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDM 595

Query: 497 -------------VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
                        +++Y   + GL +  R EEA+ L   M      PN   Y  ++  FC
Sbjct: 596 YFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFC 655

Query: 544 KERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK 579
           K   ++  + +   + +     + +T   L   +FK
Sbjct: 656 KTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFK 691



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 96/448 (21%), Positives = 198/448 (44%), Gaps = 33/448 (7%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
            G  +  R    E+ R  C     T+   +  Y +        + F+ M   G  PN   
Sbjct: 501 AGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVT 560

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQ--------------------LPNFLSFNIALCNLC 196
              ++D   K G++D   ++    Q                     PN +++   +  LC
Sbjct: 561 YTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLC 620

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
           K N V    +++  M   G  PN  +++ L++ FCK G++  A ++   M   G   ++ 
Sbjct: 621 KANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLY 680

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
            ++ LI+   + +RLD+   +  KM++N C+PNVV YT +I G  +      A+  +  +
Sbjct: 681 TYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKM 740

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
           E  G  P+++ +  +ID   K+G  +  L++Y  +      P+  T+  L++  C +G  
Sbjct: 741 EEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLL 800

Query: 377 SLLPKLVCGLEVEADLVVYNALLSYFCK--AGFPNQ---AVKLYNTMLDKGFTPDNYSFV 431
               +L+     E     +   +S + K   GF  +   ++ L + + +    P    + 
Sbjct: 801 DEAHRLL----DEMKQTYWPRHISSYRKIIEGFNREFITSIGLLDELSENESVPVESLYR 856

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAV---NAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
            L+     A +++ A+N+ + I  ++P++   N +++T++++ L  A +  KA +L+   
Sbjct: 857 ILIDNFIKAGRLEGALNLLEEIS-SSPSLAVANKYLYTSLIESLSHASKVDKAFELYASM 915

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
           I +    ++ ++   I+GL   G+ +EA
Sbjct: 916 INKNVVPELSTFVHLIKGLTRVGKWQEA 943



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/323 (24%), Positives = 149/323 (46%), Gaps = 11/323 (3%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG----IKVLKETQLPNFLSFNIALCNL 195
           E  D M   G  PN    + ++D   K G+++      +K+ +    PN  +++  + +L
Sbjct: 630 ELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSL 689

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
            K   +  V  V+  M+     PNV ++  +++  CK+G+  EAY+L+  M  +G   +V
Sbjct: 690 FKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNV 749

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
             +T +IDGF ++ +++    L+  M   GC+PN +TY  LI       +   A   LD 
Sbjct: 750 ITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDE 809

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
           ++       +  +  +I+  ++   +  ++ + D L E + VP    +  L+     +GR
Sbjct: 810 MKQTYWPRHISSYRKIIEGFNR--EFITSIGLLDELSENESVPVESLYRILIDNFIKAGR 867

Query: 376 FSLLPKLVCGLEVEADLVV-----YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
                 L+  +     L V     Y +L+     A   ++A +LY +M++K   P+  +F
Sbjct: 868 LEGALNLLEEISSSPSLAVANKYLYTSLIESLSHASKVDKAFELYASMINKNVVPELSTF 927

Query: 431 VGLLRGLCGARKIDEAINVYQGI 453
           V L++GL    K  EA+ +   I
Sbjct: 928 VHLIKGLTRVGKWQEALQLSDSI 950



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/300 (21%), Positives = 126/300 (42%), Gaps = 45/300 (15%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           TG+ E  + +  +++  G      T+   +   ++ +   +VL+   +M     TPN   
Sbjct: 657 TGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVI 716

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
              ++D L K+G+ +   +++ + +     PN +++   +    K+  +    ++   M 
Sbjct: 717 YTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMC 776

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLL----------------------------- 243
            KG  PN   + +L+N  C  G + EA++LL                             
Sbjct: 777 SKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGFNREFITS 836

Query: 244 -GLMITLGTSLSV---NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSP-----NVVTYT 294
            GL+  L  + SV   + + +LID F +  RL+ A  L E++     SP     N   YT
Sbjct: 837 IGLLDELSENESVPVESLYRILIDNFIKAGRLEGALNLLEEISS---SPSLAVANKYLYT 893

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
           SLI+    A     AF     + ++   P+L     LI  L+++G + +AL + D + ++
Sbjct: 894 SLIESLSHASKVDKAFELYASMINKNVVPELSTFVHLIKGLTRVGKWQEALQLSDSICQM 953


>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 119/504 (23%), Positives = 227/504 (45%), Gaps = 7/504 (1%)

Query: 107 VGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK 166
           V E  R G       F   +  + +G      ++ F +M + G +PN    N ++  L K
Sbjct: 301 VFETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCK 360

Query: 167 IGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
            G +D       K++K+      +++++ +  L KL   +    V+   + KGF PN  +
Sbjct: 361 HGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVV 420

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           +  L++ +CKMG + +A ++ G M++ G + +      +I GF ++ +++ A  + E+M+
Sbjct: 421 YNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEML 480

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
             G S N   +T++I        F  A  FL  +      P+      L+  L K G + 
Sbjct: 481 SRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHS 540

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALL 399
           DA++++  LLE     +  T  +L+  +C +G      +L+  +       D + YN L+
Sbjct: 541 DAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLI 600

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
           S  CK G   +  KL   M+ +G  PD +++  L+ G+C   K+DEA+N++      +  
Sbjct: 601 SGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLV 660

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            N + +  ++D   +A +  +  +LF   + +   L+ V Y   IR     G T EA+ L
Sbjct: 661 PNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKL 720

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK 579
           +  M+   +PP   TY  ++   C    ++  K L+ ++    +  +      L     K
Sbjct: 721 HDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCK 780

Query: 580 FHSSSSAVNQLVEMCNLGLIPDEM 603
                  VN L EM +  + P+++
Sbjct: 781 LGQMDKVVNVLQEMSSYDIHPNKI 804



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 131/493 (26%), Positives = 226/493 (45%), Gaps = 63/493 (12%)

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
            P   +    L +L K N++     V   M R+G  P+V +F   +N FCK G++ +A Q
Sbjct: 276 FPTVKTCTFLLSSLVKANELEKSYWVFETM-RQGVSPDVYLFSTAINAFCKGGKVEDAIQ 334

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           L   M  LG S +V  +  LI G  +   LD A    EKMV++G +  ++TY+ LI G M
Sbjct: 335 LFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLM 394

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           + + F+ A S L     +G  P+ V +N LID   KMG+  DAL +   ++   + P+S 
Sbjct: 395 KLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSV 454

Query: 362 TFCSLLSTVC---------------LSGRFSLLP--------------KLVCGLEVEADL 392
           T  S++   C               LS  FS+ P              +    L    ++
Sbjct: 455 TLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREM 514

Query: 393 VVYN---------ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
           ++ N          L+   CK G  + AV+L+  +L+KGF  +  +   L+ GLC    +
Sbjct: 515 LLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNM 574

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
            EA+ + + ++     ++   +  ++    + G+  +  +L    + +    D  +Y + 
Sbjct: 575 QEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLL 634

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           I G+   G+ +EA  L+++ K   + PN YTY VM+  +CK   I+  ++L  +++   +
Sbjct: 635 IHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNL 694

Query: 564 ELD---YHTSIRL------TKFIFKFHS---------SSSAVNQLVE-MCNLGLIPD--- 601
           EL+   Y+T IR       T   FK H          +++  + L+  MCN+G + D   
Sbjct: 695 ELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKC 754

Query: 602 --EMWRKLGLLSD 612
             +  RK GLL +
Sbjct: 755 LIDEMRKEGLLPN 767



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 120/486 (24%), Positives = 213/486 (43%), Gaps = 47/486 (9%)

Query: 135 YGMVLEAF---DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLS 187
           +G + EAF   ++M + G        +++++ L K+ + +    VLKET      PN + 
Sbjct: 361 HGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVV 420

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           +N  +   CK+ ++ +   + G MV KG  PN      ++  FCK+G++ +A  +L  M+
Sbjct: 421 YNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEML 480

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
           + G S++  A+T +I       R + A     +M+     PN    T+L+ G  +    S
Sbjct: 481 SRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHS 540

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A      L  +G   +LV  N LI  L K G+  +A+ +   +LE   V D  T+ +L+
Sbjct: 541 DAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLI 600

Query: 368 STVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           S  C  G+    F L  ++V    +E D   YN L+   C+ G  ++AV L+N    +  
Sbjct: 601 SGCCKEGKVEEGFKLRGEMV-KQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDL 659

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
            P+ Y++  ++ G C A KI+E   ++  ++  N  +N+ V+  ++      G   +A +
Sbjct: 660 VPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFK 719

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIA---------------- 527
           L      +  P    +Y+  I G+   GR E+A  L  +M+                   
Sbjct: 720 LHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYC 779

Query: 528 -------------------VPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
                              + PN  TY VM+  + K  ++K   +LL +++   I  D  
Sbjct: 780 KLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTV 839

Query: 569 TSIRLT 574
           T   LT
Sbjct: 840 TYNVLT 845



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 112/470 (23%), Positives = 203/470 (43%), Gaps = 49/470 (10%)

Query: 137 MVLEAFDEMGRF-------GFTPNTFARNIVMDVLFKIGRVDLGIKV----LKETQLPNF 185
           M LE F+E           GFTPN    N ++D   K+G +   +++    + +   PN 
Sbjct: 394 MKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNS 453

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL-- 243
           ++ N  +   CK+  +   + ++  M+ +GF  N   F  +++  C   R   A + L  
Sbjct: 454 VTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLRE 513

Query: 244 ----------GLMITLGTSL--------SVNAW---------------TVLIDGFRRLRR 270
                     GL+ TL   L        +V  W                 LI G  +   
Sbjct: 514 MLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGN 573

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           +  A  L +KM++ G   + +TY +LI G  +       F     +  +G  PD   +N+
Sbjct: 574 MQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNL 633

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---E 387
           LI  + ++G  D+A+++++      LVP+ YT+  ++   C + +     KL   L    
Sbjct: 634 LIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQN 693

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
           +E + VVYN L+  +C+ G   +A KL++ M  KG  P   ++  L+ G+C   ++++A 
Sbjct: 694 LELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAK 753

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            +   +       N   +TA++    + G+  K + + +         + ++YTV I G 
Sbjct: 754 CLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGY 813

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
            + G  + A  L  +M    + P+  TY V+   FCKE  I+  K L +D
Sbjct: 814 SKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGKLLAED 863



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 95/429 (22%), Positives = 173/429 (40%), Gaps = 42/429 (9%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G+ E    I+ E+   G  I    F   +        +   L    EM      PN    
Sbjct: 467 GQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLL 526

Query: 158 NIVMDVLFKIGR----VDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
             ++  L K G+    V+L  ++L++    N ++ N  +  LCK  ++     ++  M+ 
Sbjct: 527 TTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLE 586

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +GF  +   +  L++  CK G++ E ++L G M+  G       + +LI G  R+ +LD 
Sbjct: 587 RGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDE 646

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  LW +       PNV TY  +I G+ +A            L ++    + V +N LI 
Sbjct: 647 AVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIR 706

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA--- 390
              + G+  +A  ++D +    + P + T+ SL+  +C  GR      L+  +  E    
Sbjct: 707 AYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLP 766

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           ++V Y AL+  +CK G                                   ++D+ +NV 
Sbjct: 767 NVVCYTALIGGYCKLG-----------------------------------QMDKVVNVL 791

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
           Q +   +   N   +T ++D   ++G    A +L    + +    D V+Y V   G  + 
Sbjct: 792 QEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKE 851

Query: 511 GRTEEAYIL 519
           G+ EE  +L
Sbjct: 852 GKIEEGKLL 860



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 118/273 (43%), Gaps = 5/273 (1%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
           +R +  D  +++ +IS   +  G+ E    + GE+ + G      T+ L +    R    
Sbjct: 586 ERGFVLDKITYNTLISGCCK-EGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKL 644

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF----LSFNIA 191
              +  ++E       PN +   +++D   K  +++ G K+  E    N     + +N  
Sbjct: 645 DEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTL 704

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           +   C+  +      +   M  KG  P    +  L++  C +GR+ +A  L+  M   G 
Sbjct: 705 IRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGL 764

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
             +V  +T LI G+ +L ++D    + ++M      PN +TYT +I G+ ++     A  
Sbjct: 765 LPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAK 824

Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
            L  +  +G  PD V +NVL +   K G  ++ 
Sbjct: 825 LLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEG 857


>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 597

 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 123/480 (25%), Positives = 223/480 (46%), Gaps = 56/480 (11%)

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNI 190
           Y  V   +++M   G +P+    NI+++ L  + RV  G+ V    L+   +P+ +++  
Sbjct: 112 YSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTT 171

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +  LC  + +S    +   M + G  PN   +  L+   C+ G I+ A +L   M+   
Sbjct: 172 LIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDS 231

Query: 251 TSLSVN------AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
           +   +N      +++++ID   + RR D A  L+E+M   G +P V++YTSL        
Sbjct: 232 SLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSL-------- 283

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
           M+  A    + + ++G  P++V  NVLID L K G   +A D+ + +++  +VP+  T+ 
Sbjct: 284 MWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYN 343

Query: 365 SLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
           SL+   CL G  +   +L   +     E D++ Y  L++ +CK     +A+KLYN ML  
Sbjct: 344 SLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQV 403

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQ--------------GIVMN----------- 456
           G  PD  ++  LL GL    K+ +A  ++               GI +N           
Sbjct: 404 GKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEA 463

Query: 457 ----------NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
                     N  ++      ++D L +AG+   A +LF +   E+   DVV+Y + I  
Sbjct: 464 MELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHE 523

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
              GG+  +A IL+ +M+     P+  TY  ++  F + + ++ V  LL  ++   + LD
Sbjct: 524 FCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLD 583



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/433 (22%), Positives = 198/433 (45%), Gaps = 49/433 (11%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
           +R Y  D+ ++  +I  +  +  R      +   + ++GC   A T+   ++   R    
Sbjct: 159 RRGYIPDIVTYTTLIKGLC-MEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNI 217

Query: 136 GMVLEAFDEM----GRFG--FTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL------- 182
            + L+   EM      +G  F P   + +I++D L K  R D    + +E ++       
Sbjct: 218 SIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTV 277

Query: 183 ------------------------PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYP 218
                                   PN ++FN+ +  LCK   V   KD++ +M+++G  P
Sbjct: 278 ISYTSLMWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVP 337

Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
           N+  +  L+  FC +G +  A +L   M + G    V  +TVLI+G+ +  +++ A  L+
Sbjct: 338 NLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLY 397

Query: 279 EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
             M+Q G  P+V TY +L+ G  +      A     +++  G   DL  + + ++ L K 
Sbjct: 398 NGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKN 457

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-------FSLLPKLVCGLEVEAD 391
           G   +A+++++ L    +  D   F  L+  +C +G+       F  LP+     E++ D
Sbjct: 458 GCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQ----EELQPD 513

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
           +V YN ++  FC+ G   +A  L+  M   G TPD  ++  L+RG   ++K+++ + +  
Sbjct: 514 VVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLH 573

Query: 452 GIVMNNPAVNAHV 464
            +V  + +++ ++
Sbjct: 574 MMVQRDVSLDVNI 586



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 77/362 (21%), Positives = 154/362 (42%), Gaps = 38/362 (10%)

Query: 231 CKMGRIA--EAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSP 288
           CK G I   +A+Q   LM+    +  ++++T L+ G  +++      YL+ +M  +G SP
Sbjct: 70  CKTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 289 NVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVY 348
           +  T   L+             + +  +   G+ PD+V +  LI  L        A  ++
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 349 DGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---------VCGLEVEADLVVYNALL 399
             + +L   P++ T+ +L+  +C +G  S+  KL         + G+  +  ++ Y+ ++
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIII 249

Query: 400 SYFCKAGFPN---------------------------QAVKLYNTMLDKGFTPDNYSFVG 432
              CK    +                           +A +L+N M+++G  P+  +F  
Sbjct: 250 DALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMWEEAKRLFNEMVNQGVQPNVVTFNV 309

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           L+  LC   K+ EA ++ + ++      N   + ++++     G  + A +LF     + 
Sbjct: 310 LIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKG 369

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVK 552
              DV+ YTV I G  +  + EEA  LY+ M  +   P+  TY  +L    +   +   K
Sbjct: 370 CEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAK 429

Query: 553 RL 554
           +L
Sbjct: 430 KL 431



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/299 (23%), Positives = 134/299 (44%), Gaps = 25/299 (8%)

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           M+ +  +P + ++T L+ G  + K +S  F   + +   G +PD    N+L++CL  +  
Sbjct: 87  MMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNR 146

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-------FSLLPKLVCGLEVEADLV 393
             + L V  G+L    +PD  T+ +L+  +C+  R       F+ + KL C      + +
Sbjct: 147 VGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGC----TPNAI 202

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKG------FTPDNYSFVGLLRGLCGARKIDEAI 447
            Y  L+   C+ G  + A+KL+  ML+        F P   S+  ++  LC  R+ DEA 
Sbjct: 203 TYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEAR 262

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
           ++++ + +         +T+++          +A +LF   + +    +VV++ V I  L
Sbjct: 263 DLFEEMKVQGMTPTVISYTSLM--------WEEAKRLFNEMVNQGVQPNVVTFNVLIDVL 314

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
            + G+  EA  L   M    + PN  TY  ++  FC   ++   + L   +     E D
Sbjct: 315 CKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPD 373



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 82/173 (47%), Gaps = 5/173 (2%)

Query: 393 VVYNALLSYF---CKAGFPN--QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
           + +   LS F   CK G     QA + ++ M+    TP   SF  LL GL   +   +  
Sbjct: 57  ISFQQQLSMFLHNCKTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVF 116

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            +Y  + ++  + +      +++ L    R  + + +    +   Y  D+V+YT  I+GL
Sbjct: 117 YLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGL 176

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
               R  +A +L+++M+ +   PNA TY  ++   C+  NI +  +L Q++++
Sbjct: 177 CMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLN 229


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 146/625 (23%), Positives = 267/625 (42%), Gaps = 65/625 (10%)

Query: 48  LAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMIS--VVTRLTGRFETVRG 105
           L PH V + L    +    L FF W ++++ + HD+  F  M++  V  RL    + VR 
Sbjct: 76  LKPHHVVNILQTHKNTDSVLRFFFWISRRKFFKHDMSCFVSMLNRLVRDRLFAPADHVRI 135

Query: 106 IV-------GELARVGCVIKAQ-----------TFLLFLRIYWRGEMYGMVLEAFDEMGR 147
           ++       GE+ RV   +              +F   L    + +M  +  + + +M  
Sbjct: 136 LMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLN 195

Query: 148 FGFTPNTFARNIVMDVLFKIGRV-----------------------------------DL 172
            G  P+    N ++++L K GRV                                   DL
Sbjct: 196 SGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDL 255

Query: 173 GI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLN 228
                 +++K+   PN ++++  +  LC    +    D++  MV+KG  P V  + I L 
Sbjct: 256 AFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLV 315

Query: 229 CFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSP 288
             C  G  +EA +LLG M   G   ++  +T LI G  R  + ++A  L+ KM+ +G  P
Sbjct: 316 SLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVP 375

Query: 289 NVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVY 348
             VTY +LI        F  AF+    + S G  P    +N +I C   MG    A+ ++
Sbjct: 376 TTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIF 435

Query: 349 DGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKA 405
           D +L+    P+  T+ +L+   C  G  +    L +++ G  ++ D   Y  L+S F + 
Sbjct: 436 DKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRG 495

Query: 406 GFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVH 465
           G    A  L+  M++ G +P++ ++  ++ G     K+D+A+ ++  +V +    ++  +
Sbjct: 496 GKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTY 555

Query: 466 TAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKH 525
             ++    +     +A     + + +    +V++YT  I GL   GRT  A+ ++ +M+ 
Sbjct: 556 NVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEK 615

Query: 526 IAVPPNAYTYRVMLLSFCKERNIKMVK--RLLQDVIDARIELDYHTSIRLTKFIFKFHSS 583
               PN YTY  ++   C+E   +  +   LL  +     E +  T   L K +      
Sbjct: 616 RNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRC 675

Query: 584 SSAVNQLVEMCNLGLIP-DEMWRKL 607
             A   +V M   GL P +E++R L
Sbjct: 676 YEADQLVVSMQKKGLQPSEEIYRAL 700



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 121/483 (25%), Positives = 220/483 (45%), Gaps = 17/483 (3%)

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           ++G++ + GCV   QTF   +    R   + + +  + +M   G  P T   N +++ L 
Sbjct: 329 LLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLC 388

Query: 166 KIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
             GR +    + K       LP+  ++N  +   C + D+     +   M++ G  PNV 
Sbjct: 389 VEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVI 448

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV--LIDGFRRLRRLDMAGYLWE 279
            +  L+  +CK G +  A +LL +M   G  L  +AWT   LI GF R  +L+ A  L+ 
Sbjct: 449 TYNTLIYGYCKQGNLNNAMRLLEIM--KGNGLKPDAWTYTELISGFSRGGKLEHATSLFY 506

Query: 280 KMVQNGCSPNVVTYTSLIKGFME-AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
            M+++G SPN VTYT++I G+   AK+      F  M+ES G+ P    +NV+I   SK 
Sbjct: 507 GMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVES-GNLPSSQTYNVMISGFSKT 565

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE---ADLVVY 395
            S  +A +    +++  L+P+  T+ S +  +C +GR  L  K+   +E      +L  Y
Sbjct: 566 NSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTY 625

Query: 396 NALLSYFCKAGFPNQAVKLYN---TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           ++L+   C+ G    A ++YN    +   G  P+  ++  L++GLCG  +  EA  +   
Sbjct: 626 SSLIYGLCQEGRAEDA-EMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVS 684

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           +       +  ++ A++    +  +   A+ +F       + L +  Y   I  L +   
Sbjct: 685 MQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENF 744

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
            EEA  ++  M       +   + V+L    KE    +  +LL  +      L++ T + 
Sbjct: 745 IEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVM 804

Query: 573 LTK 575
           L +
Sbjct: 805 LAR 807



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 111/477 (23%), Positives = 204/477 (42%), Gaps = 45/477 (9%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           K+R    ++Q+F  +IS ++R  G+FE   G+  ++   G V    T+   +        
Sbjct: 334 KKRGCVPNIQTFTALISGLSR-DGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGR 392

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNI 190
           +      F  M   G  P+T   N ++     +G +   +    K+LK    PN +++N 
Sbjct: 393 FETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNT 452

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +   CK  +++N   ++ +M   G  P+   +  L++ F + G++  A  L   M+  G
Sbjct: 453 LIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHG 512

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
            S +   +T +IDG+  L ++D A  L+ KMV++G  P+  TY  +I GF +    S A 
Sbjct: 513 ISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAE 572

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
           +F   +  +G  P+++ +   ID L + G    A  ++  + +    P+ YT+ SL+  +
Sbjct: 573 NFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGL 632

Query: 371 CLSGR------------------------FSLLPKLVCGLE--VEADLVV---------- 394
           C  GR                        ++ L K +CG     EAD +V          
Sbjct: 633 CQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQP 692

Query: 395 ----YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
               Y ALL   CK      A+ ++ +M   GF      +  L+  LC    I+EA  ++
Sbjct: 693 SEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIF 752

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
           Q ++  +   +    T ++D L++ G     ++L          L+  +Y +  R L
Sbjct: 753 QTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLAREL 809



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 53/259 (20%), Positives = 110/259 (42%), Gaps = 8/259 (3%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
           AL+ F W   +       Q+++ MIS  ++ T          G++ + G +    T+  F
Sbjct: 536 ALALF-WKMVESGNLPSSQTYNVMISGFSK-TNSISEAENFCGKMVKQGLLPNVITYTSF 593

Query: 126 LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD------LGIKVLKE 179
           +    R    G+  + F EM +  + PN +  + ++  L + GR +      L  ++   
Sbjct: 594 IDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHY 653

Query: 180 TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEA 239
              PN  ++   +  LC          ++  M +KG  P+  ++  LL   CK  ++  A
Sbjct: 654 GCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESA 713

Query: 240 YQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG 299
             +   M TLG  L ++ +  LI    +   ++ A  +++ M++   + + V +T L+ G
Sbjct: 714 LNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDG 773

Query: 300 FMEAKMFSIAFSFLDMLES 318
            ++     +    L ++ES
Sbjct: 774 LLKEGETDLCLKLLHVMES 792


>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
          Length = 683

 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 133/550 (24%), Positives = 248/550 (45%), Gaps = 58/550 (10%)

Query: 136 GMVLEAFDEMGR-FGFTPNTFARNIVMDVLFKIGRVD-------LGIKVLKETQLPNFLS 187
           G  L   D+M R F  +P+  + N+V+  L    R D       L  ++L++   P   +
Sbjct: 123 GRALHLLDQMPRRFAVSPSFRSYNVVLSTL---ARADCHADALLLYRRMLRDRVPPTTFT 179

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           F +A   LC+L    +   ++  M R G  P+  +++ +++     G +AEA  LL  M+
Sbjct: 180 FGVAARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEML 239

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
            +G +  VN +  L+ G   L R+  A  L ++M+  GC P+VVTY  L++G    +   
Sbjct: 240 LMGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQAD 299

Query: 308 IAFSFL-------------------------------DMLESEGHAPDLVFHNVLIDCLS 336
            A + L                               +M+ S+G  PD+  +++L+  L 
Sbjct: 300 EACAMLGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLC 359

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG-----RFSLLPKLVCGLEVEAD 391
           K+G +  A+ + D + E    P+  T+ +LL + C +G     R  L   L  G  + + 
Sbjct: 360 KLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQ 419

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
              YN ++   CK G  +QA +L   M  +G  PD  ++  ++  LC    ++EA ++++
Sbjct: 420 --GYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFR 477

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
            ++      N   +  ++  L+  GR  + ++L    ++    LDV+SY   I+ L + G
Sbjct: 478 NLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEG 537

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSI 571
             + +  L  +M    + PN ++Y +++   CK   ++    L +++++  +  D  T  
Sbjct: 538 NVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYN 597

Query: 572 RLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM-------WR-KLGLLSDETM-TPVSLFD 622
            L   + K   + +A+N L ++ N  + PD +       W  K+ LL D  M    ++  
Sbjct: 598 TLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISG 657

Query: 623 GFVPCERRAG 632
           G VP ER  G
Sbjct: 658 GIVPNERTWG 667



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 109/498 (21%), Positives = 209/498 (41%), Gaps = 73/498 (14%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET 180
           TF +  R   R    G  L     M R G  P+      V+  L   G V     +L E 
Sbjct: 179 TFGVAARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEM 238

Query: 181 QL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKM--- 233
            L     +  +FN  +  LC L  V     ++  M+ +G  P+V  +  LL   C+    
Sbjct: 239 LLMGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQA 298

Query: 234 ----------------------------GRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF 265
                                       G++A A +L  +M + G    V+ +++L+ G 
Sbjct: 299 DEACAMLGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGL 358

Query: 266 RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML--------- 316
            +L R   A  + ++M + GC+PN+VTY++L+  F    M+  A + LD +         
Sbjct: 359 CKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNS 418

Query: 317 --------------------------ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDG 350
                                     +S+G  PD+  +N +I  L      ++A  ++  
Sbjct: 419 QGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRN 478

Query: 351 LLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGF 407
           L+E  +V +  T+ +L+  +  +GR+    +L   + +     D++ YN L+   CK G 
Sbjct: 479 LIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGN 538

Query: 408 PNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTA 467
            ++++ L   M+ KG  P+N+S+  L+  LC A K+ +A+ + + ++      +   +  
Sbjct: 539 VDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNT 598

Query: 468 IVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIA 527
           +++ L + G  H A+ L  +   E    D+V+Y + I    +    ++A +L  +     
Sbjct: 599 LINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGG 658

Query: 528 VPPNAYTYRVMLLSFCKE 545
           + PN  T+ +M+ +F ++
Sbjct: 659 IVPNERTWGMMVQNFVRQ 676



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/353 (22%), Positives = 153/353 (43%), Gaps = 37/353 (10%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV ++  ++  + +L GRF +   ++ E+   GC     T+   L  + R  M+      
Sbjct: 347 DVHTYSILMHGLCKL-GRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAM 405

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
            D+M   GF+ N+   N ++  L K G++D   ++++E +     P+  ++N  + +LC 
Sbjct: 406 LDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCN 465

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            + +   + +   ++ +G   N   +  L++   + GR  E  +L   M+  G  L V +
Sbjct: 466 NDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVIS 525

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  LI    +   +D +  L E+MV  G  PN  +Y  LI    +A     A      + 
Sbjct: 526 YNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEML 585

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
           ++G  PD+V +N LI+ L K+G    AL++      L+ +P+                  
Sbjct: 586 NQGLTPDIVTYNTLINGLCKVGWTHAALNL------LEKLPNE----------------- 622

Query: 378 LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
                     V  D+V YN L+S+ CK    + A  L +  +  G  P+  ++
Sbjct: 623 ---------NVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTW 666



 Score = 41.2 bits (95), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 32/163 (19%), Positives = 70/163 (42%), Gaps = 5/163 (3%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV S++ +I  + +  G  +    ++ E+   G      ++ + +    +       LE 
Sbjct: 522 DVISYNGLIKALCK-EGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALEL 580

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCK 197
             EM   G TP+    N +++ L K+G     + +L+    E   P+ +++NI +   CK
Sbjct: 581 SKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCK 640

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAY 240
           +  + +   ++   +  G  PN R + +++  F +     E Y
Sbjct: 641 VRLLDDAAMLLDKAISGGIVPNERTWGMMVQNFVRQTVNLEGY 683


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 146/625 (23%), Positives = 267/625 (42%), Gaps = 65/625 (10%)

Query: 48  LAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMIS--VVTRLTGRFETVRG 105
           L PH V + L    +    L FF W ++++ + HD+  F  M++  V  RL    + VR 
Sbjct: 76  LKPHHVVNILQTHKNTDSVLRFFFWISRRKFFKHDMSCFVSMLNRLVRDRLFAPADHVRI 135

Query: 106 IV-------GELARVGCVIKAQ-----------TFLLFLRIYWRGEMYGMVLEAFDEMGR 147
           ++       GE+ RV   +              +F   L    + +M  +  + + +M  
Sbjct: 136 LMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLN 195

Query: 148 FGFTPNTFARNIVMDVLFKIGRV-----------------------------------DL 172
            G  P+    N ++++L K GRV                                   DL
Sbjct: 196 SGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDL 255

Query: 173 GI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLN 228
                 +++K+   PN ++++  +  LC    +    D++  MV+KG  P V  + I L 
Sbjct: 256 AFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLV 315

Query: 229 CFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSP 288
             C  G  +EA +LLG M   G   ++  +T LI G  R  + ++A  L+ KM+ +G  P
Sbjct: 316 SLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVP 375

Query: 289 NVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVY 348
             VTY +LI        F  AF+    + S G  P    +N +I C   MG    A+ ++
Sbjct: 376 TTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIF 435

Query: 349 DGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKA 405
           D +L+    P+  T+ +L+   C  G  +    L +++ G  ++ D   Y  L+S F + 
Sbjct: 436 DKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRG 495

Query: 406 GFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVH 465
           G    A  L+  M++ G +P++ ++  ++ G     K+D+A+ ++  +V +    ++  +
Sbjct: 496 GKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTY 555

Query: 466 TAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKH 525
             ++    +     +A     + + +    +V++YT  I GL   GRT  A+ ++ +M+ 
Sbjct: 556 NVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEK 615

Query: 526 IAVPPNAYTYRVMLLSFCKERNIKMVK--RLLQDVIDARIELDYHTSIRLTKFIFKFHSS 583
               PN YTY  ++   C+E   +  +   LL  +     E +  T   L K +      
Sbjct: 616 RNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRC 675

Query: 584 SSAVNQLVEMCNLGLIP-DEMWRKL 607
             A   +V M   GL P +E++R L
Sbjct: 676 YEADQLVVSMQKKGLQPSEEIYRAL 700



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 121/483 (25%), Positives = 220/483 (45%), Gaps = 17/483 (3%)

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           ++G++ + GCV   QTF   +    R   + + +  + +M   G  P T   N +++ L 
Sbjct: 329 LLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLC 388

Query: 166 KIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
             GR +    + K       LP+  ++N  +   C + D+     +   M++ G  PNV 
Sbjct: 389 VEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVI 448

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV--LIDGFRRLRRLDMAGYLWE 279
            +  L+  +CK G +  A +LL +M   G  L  +AWT   LI GF R  +L+ A  L+ 
Sbjct: 449 TYNTLIYGYCKQGNLNNAMRLLEIMK--GNGLKPDAWTYTELISGFSRGGKLEHATSLFY 506

Query: 280 KMVQNGCSPNVVTYTSLIKGFME-AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
            M+++G SPN VTYT++I G+   AK+      F  M+ES G+ P    +NV+I   SK 
Sbjct: 507 GMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVES-GNLPSSQTYNVMISGFSKT 565

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE---ADLVVY 395
            S  +A +    +++  L+P+  T+ S +  +C +GR  L  K+   +E      +L  Y
Sbjct: 566 NSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTY 625

Query: 396 NALLSYFCKAGFPNQAVKLYN---TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           ++L+   C+ G    A ++YN    +   G  P+  ++  L++GLCG  +  EA  +   
Sbjct: 626 SSLIYGLCQEGRAEDA-EMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVS 684

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           +       +  ++ A++    +  +   A+ +F       + L +  Y   I  L +   
Sbjct: 685 MQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENF 744

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
            EEA  ++  M       +   + V+L    KE    +  +LL  +      L++ T + 
Sbjct: 745 IEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVM 804

Query: 573 LTK 575
           L +
Sbjct: 805 LAR 807



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 112/477 (23%), Positives = 205/477 (42%), Gaps = 45/477 (9%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           K+R    ++Q+F  +IS ++R  G+FE   G+  ++   G V    T+   +        
Sbjct: 334 KKRGCVPNIQTFTALISGLSR-DGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGR 392

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNI 190
           +      F  M   G  P+T   N ++     +G +   +    K+LK    PN +++N 
Sbjct: 393 FETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNT 452

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +   CK  +++N   ++ +M   G  P+   +  L++ F + G++  A  L   M+  G
Sbjct: 453 LIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHG 512

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
            S +   +T +IDG+  L ++D A  L+ KMV++G  P+  TY  +I GF +    S A 
Sbjct: 513 ISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAE 572

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
           +F   +  +G  P+++ +   ID L + G    A  ++  + +    P+ YT+ SL+  +
Sbjct: 573 NFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGL 632

Query: 371 CLSGR------------------------FSLLPKLVCGLE--VEADLVV---------- 394
           C  GR                        ++ L K +CG     EAD +V          
Sbjct: 633 CQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQP 692

Query: 395 ----YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
               Y ALL   CK      A+ ++ +M   GF      +  L+  LC    I+EA  ++
Sbjct: 693 SEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIF 752

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
           Q ++  +   +  V T ++D L++ G     ++L          L+  +Y +  R L
Sbjct: 753 QTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLAREL 809



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/259 (20%), Positives = 110/259 (42%), Gaps = 8/259 (3%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
           AL+ F W   +       Q+++ MIS  ++ T          G++ + G +    T+  F
Sbjct: 536 ALALF-WKMVESGNLPSSQTYNVMISGFSK-TNSISEAENFCGKMVKQGLLPNVITYTSF 593

Query: 126 LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD------LGIKVLKE 179
           +    R    G+  + F EM +  + PN +  + ++  L + GR +      L  ++   
Sbjct: 594 IDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHY 653

Query: 180 TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEA 239
              PN  ++   +  LC          ++  M +KG  P+  ++  LL   CK  ++  A
Sbjct: 654 GCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESA 713

Query: 240 YQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG 299
             +   M TLG  L ++ +  LI    +   ++ A  +++ M++   + + V +T L+ G
Sbjct: 714 LNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDG 773

Query: 300 FMEAKMFSIAFSFLDMLES 318
            ++     +    L ++ES
Sbjct: 774 LLKEGETDLCLKLLHVMES 792


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 118/502 (23%), Positives = 226/502 (45%), Gaps = 7/502 (1%)

Query: 109 ELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIG 168
           E  R G       F   +  + +G      ++ F +M + G +PN    N ++  L K G
Sbjct: 236 ETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHG 295

Query: 169 RVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFE 224
            +D       K++K+      +++++ +  L KL   +    V+   + KGF PN  ++ 
Sbjct: 296 NLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYN 355

Query: 225 ILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN 284
            L++ +CKMG + +A ++ G M++ G + +      +I GF ++ +++ A  + E+M+  
Sbjct: 356 TLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSR 415

Query: 285 GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
           G S N   +T++I        F  A  FL  +      P+      L+  L K G + DA
Sbjct: 416 GFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDA 475

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSY 401
           ++++  LLE     +  T  +L+  +C +G      +L+  +       D + YN L+S 
Sbjct: 476 VELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISG 535

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVN 461
            CK G   +  KL   M+ +G  PD +++  L+ G+C   K+DEA+N++      +   N
Sbjct: 536 CCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPN 595

Query: 462 AHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYS 521
            + +  ++D   +A +  +  +LF   + +   L+ V Y   IR     G T EA+ L+ 
Sbjct: 596 VYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHD 655

Query: 522 QMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFH 581
            M+   +PP   TY  ++   C    ++  K L+ ++    +  +      L     K  
Sbjct: 656 DMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLG 715

Query: 582 SSSSAVNQLVEMCNLGLIPDEM 603
                VN L EM +  + P+++
Sbjct: 716 QMDKVVNVLQEMSSYDIHPNKI 737



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 131/493 (26%), Positives = 226/493 (45%), Gaps = 63/493 (12%)

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
            P   +    L +L K N++     V   M R+G  P+V +F   +N FCK G++ +A Q
Sbjct: 209 FPTVKTCTFLLSSLVKANELEKSYWVFETM-RQGVSPDVYLFSTAINAFCKGGKVEDAIQ 267

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           L   M  LG S +V  +  LI G  +   LD A    EKMV++G +  ++TY+ LI G M
Sbjct: 268 LFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLM 327

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           + + F+ A S L     +G  P+ V +N LID   KMG+  DAL +   ++   + P+S 
Sbjct: 328 KLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSV 387

Query: 362 TFCSLLSTVC---------------LSGRFSLLP--------------KLVCGLEVEADL 392
           T  S++   C               LS  FS+ P              +    L    ++
Sbjct: 388 TLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREM 447

Query: 393 VVYN---------ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
           ++ N          L+   CK G  + AV+L+  +L+KGF  +  +   L+ GLC    +
Sbjct: 448 LLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNM 507

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
            EA+ + + ++     ++   +  ++    + G+  +  +L    + +    D  +Y + 
Sbjct: 508 QEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLL 567

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           I G+   G+ +EA  L+++ K   + PN YTY VM+  +CK   I+  ++L  +++   +
Sbjct: 568 IHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNL 627

Query: 564 ELD---YHTSIRL------TKFIFKFHS---------SSSAVNQLVE-MCNLGLIPD--- 601
           EL+   Y+T IR       T   FK H          +++  + L+  MCN+G + D   
Sbjct: 628 ELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKC 687

Query: 602 --EMWRKLGLLSD 612
             +  RK GLL +
Sbjct: 688 LIDEMRKEGLLPN 700



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 112/502 (22%), Positives = 213/502 (42%), Gaps = 52/502 (10%)

Query: 137 MVLEAFDEMGRF-------GFTPNTFARNIVMDVLFKIGRVDLGIKV----LKETQLPNF 185
           M LE F+E           GFTPN    N ++D   K+G +   +++    + +   PN 
Sbjct: 327 MKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNS 386

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFY---------------------------- 217
           ++ N  +   CK+  +   + ++  M+ +GF                             
Sbjct: 387 VTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLRE 446

Query: 218 -------PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
                  PN  +   L+   CK G+ ++A +L   ++  G   ++     LI G  +   
Sbjct: 447 MLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGN 506

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           +  A  L +KM++ G   + +TY +LI G  +       F     +  +G  PD   +N+
Sbjct: 507 MQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNL 566

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---E 387
           LI  + ++G  D+A+++++      LVP+ YT+  ++   C + +     KL   L    
Sbjct: 567 LIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQN 626

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
           +E + VVYN L+  +C+ G   +A KL++ M  KG  P   ++  L+ G+C   ++++A 
Sbjct: 627 LELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAK 686

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            +   +       N   +TA++    + G+  K + + +         + ++YTV I G 
Sbjct: 687 CLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGY 746

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
            + G  + A  L  +M    + P+  TY V+   FCKE  I+   ++   +    + LD 
Sbjct: 747 SKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLD- 805

Query: 568 HTSIRLTKFIFKFHSSSSAVNQ 589
              I  T  +  +   S+  NQ
Sbjct: 806 --EITYTTLVHGWQQPSALTNQ 825



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/416 (21%), Positives = 174/416 (41%), Gaps = 7/416 (1%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G+ E    I+ E+   G  I    F   +        +   L    EM      PN    
Sbjct: 400 GQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLL 459

Query: 158 NIVMDVLFKIGR----VDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
             ++  L K G+    V+L  ++L++    N ++ N  +  LCK  ++     ++  M+ 
Sbjct: 460 TTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLE 519

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +GF  +   +  L++  CK G++ E ++L G M+  G       + +LI G  R+ +LD 
Sbjct: 520 RGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDE 579

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  LW +       PNV TY  +I G+ +A            L ++    + V +N LI 
Sbjct: 580 AVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIR 639

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA--- 390
              + G+  +A  ++D +    + P + T+ SL+  +C  GR      L+  +  E    
Sbjct: 640 AYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLP 699

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           ++V Y AL+  +CK G  ++ V +   M      P+  ++  ++ G   +  +  A  + 
Sbjct: 700 NVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLL 759

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
             +V      +   +  + +   + G+  +  ++      E  PLD ++YT  + G
Sbjct: 760 HEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHG 815



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/240 (23%), Positives = 108/240 (45%), Gaps = 11/240 (4%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           K RD   +V ++  MI    +   + E    +  EL      + +  +   +R Y R   
Sbjct: 588 KSRDLVPNVYTYGVMIDGYCK-ADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRN-- 644

Query: 135 YGMVLEAF---DEMGRFGFTPNTFARNIVMDVLFKIGRVD----LGIKVLKETQLPNFLS 187
            G  +EAF   D+M   G  P T   + ++  +  IGR++    L  ++ KE  LPN + 
Sbjct: 645 -GNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVC 703

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           +   +   CKL  +  V +V+  M     +PN   + ++++ + K G +  A +LL  M+
Sbjct: 704 YTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMV 763

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
             G       + VL +GF +  +++    + + M Q G   + +TYT+L+ G+ +    +
Sbjct: 764 GKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGWQQPSALT 823


>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
 gi|224033903|gb|ACN36027.1| unknown [Zea mays]
          Length = 655

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 117/510 (22%), Positives = 228/510 (44%), Gaps = 38/510 (7%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR      ++ E+ R GC      + + L    RG  +   +   +++   G   +    
Sbjct: 136 GRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNC 195

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N+V++ +   G VD  + +L++       P+ +S+N  L  LC       V++++  MVR
Sbjct: 196 NLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVR 255

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
               PN+  F  L++  C+ G     +++L  M+  G +  +  +  +IDG  +   L++
Sbjct: 256 MACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEV 315

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL-DMLESEGHAPDLVFHNVLI 332
           A  +  +M   G  PNVV Y +L+KG   A+ +      L +M + +    D+ F N+L+
Sbjct: 316 AHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTF-NILV 374

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADL 392
           D   + G  D  +++ + +LE   +PD                                +
Sbjct: 375 DFFCQNGLVDRVIELLEQMLERGCMPD--------------------------------V 402

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           + Y  +++ FCK G  ++AV L  +M   G  P+  S+  +L+GLC A +  +A ++   
Sbjct: 403 ITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQ 462

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           ++     +N      +++ L + G   +AI+L ++ +V     D++SY+  I GL + G+
Sbjct: 463 MIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 522

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
           T+EA  L + M +  + PN   Y  +  +  +E  I  V ++  ++ D  I  D      
Sbjct: 523 TDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNA 582

Query: 573 LTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
           +   + K   +  A+  L  M + G +P+E
Sbjct: 583 VISSLCKRGETERAIEFLAYMVSSGCVPNE 612



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/372 (25%), Positives = 181/372 (48%), Gaps = 8/372 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           ++ +F+ +IS + R  G FE V  ++ ++   GC    + +   +    +     +  E 
Sbjct: 261 NIVTFNTLISYLCR-NGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEI 319

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE---TQLP-NFLSFNIALCNLCK 197
            + M  +G  PN    N ++  L    R +   ++L E      P + ++FNI +   C+
Sbjct: 320 LNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQ 379

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              V  V +++  M+ +G  P+V  +  ++N FCK G I EA  LL  M   G   +  +
Sbjct: 380 NGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTIS 439

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T+++ G     R   A  L  +M+Q GC  N +T+ +LI    +  +   A   L  + 
Sbjct: 440 YTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQML 499

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G +PDL+ ++ +ID L K G  D+AL++ + ++   + P++  + S+ S +   GR +
Sbjct: 500 VNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRIN 559

Query: 378 LLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
            + ++   ++   + +D V+YNA++S  CK G   +A++    M+  G  P+  ++  L+
Sbjct: 560 KVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILI 619

Query: 435 RGLCGARKIDEA 446
           RGL     + EA
Sbjct: 620 RGLASEGFVKEA 631



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/288 (19%), Positives = 112/288 (38%), Gaps = 39/288 (13%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           R+E    ++ E+    C +   TF + +  + +  +   V+E  ++M   G  P+     
Sbjct: 347 RWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYT 406

Query: 159 IVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
            V++   K G +D  + +LK        PN +S+ I L  LC      + +D++  M+++
Sbjct: 407 TVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQ 466

Query: 215 GFYPNVRMFEILLNCFCK-----------------------------------MGRIAEA 239
           G   N   F  L+N  CK                                    G+  EA
Sbjct: 467 GCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEA 526

Query: 240 YQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG 299
            +LL +M+  G S +   ++ +     R  R++    +++ +       + V Y ++I  
Sbjct: 527 LELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISS 586

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
             +      A  FL  + S G  P+   + +LI  L+  G   +A ++
Sbjct: 587 LCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEM 634



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/249 (21%), Positives = 103/249 (41%), Gaps = 5/249 (2%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
           +R    DV ++  +I+   +  G  +    ++  +   GC     ++ + L+     E +
Sbjct: 395 ERGCMPDVITYTTVINGFCK-EGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERW 453

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIA 191
               +   +M + G   N    N +++ L K G V+  I++LK+  +    P+ +S++  
Sbjct: 454 VDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTV 513

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           +  L K        +++ +MV KG  PN  ++  + +   + GRI +  Q+   +     
Sbjct: 514 IDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTI 573

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
                 +  +I    +    + A      MV +GC PN  TYT LI+G         A  
Sbjct: 574 RSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQE 633

Query: 312 FLDMLESEG 320
            L  L S+G
Sbjct: 634 MLTELCSKG 642



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/245 (20%), Positives = 104/245 (42%), Gaps = 9/245 (3%)

Query: 360 SYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
           S    SL+ ++C +GR +   + +      A +V YNA+++ +C+AG    A +L   + 
Sbjct: 58  SVRLSSLIRSLCAAGRTAEAARALSAAGGGAGVVAYNAMVAGYCRAGQLESARRLAAAV- 116

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
                P+ Y++  ++R LC   +I +A+ V   +     A    ++  I++     G   
Sbjct: 117 --PVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFR 174

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
            A+++          LDV +  + +  + + G  +EA  L   +      P+  +Y  +L
Sbjct: 175 SAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVL 234

Query: 540 LSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK---FHSSSSAVNQLVEMCNL 596
              C  +    V+ L+++++      +  T   L  ++ +   F      + Q+VE    
Sbjct: 235 KGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEH--- 291

Query: 597 GLIPD 601
           G  PD
Sbjct: 292 GCTPD 296


>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
          Length = 692

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 117/510 (22%), Positives = 228/510 (44%), Gaps = 38/510 (7%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR      ++ E+ R GC      + + L    RG  +   +   +++   G   +    
Sbjct: 173 GRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNC 232

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N+V++ +   G VD  + +L++       P+ +S+N  L  LC       V++++  MVR
Sbjct: 233 NLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVR 292

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
               PN+  F  L++  C+ G     +++L  M+  G +  +  +  +IDG  +   L++
Sbjct: 293 MACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEV 352

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL-DMLESEGHAPDLVFHNVLI 332
           A  +  +M   G  PNVV Y +L+KG   A+ +      L +M + +    D+ F N+L+
Sbjct: 353 AHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTF-NILV 411

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADL 392
           D   + G  D  +++ + +LE   +PD                                +
Sbjct: 412 DFFCQNGLVDRVIELLEQMLEHGCMPD--------------------------------V 439

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           + Y  +++ FCK G  ++AV L  +M   G  P+  S+  +L+GLC A +  +A ++   
Sbjct: 440 ITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQ 499

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           ++     +N      +++ L + G   +AI+L ++ +V     D++SY+  I GL + G+
Sbjct: 500 MIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 559

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
           T+EA  L + M +  + PN   Y  +  +  +E  I  V ++  ++ D  I  D      
Sbjct: 560 TDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNA 619

Query: 573 LTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
           +   + K   +  A+  L  M + G +P+E
Sbjct: 620 VISSLCKRGETERAIEFLAYMVSSGCVPNE 649



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 94/372 (25%), Positives = 180/372 (48%), Gaps = 8/372 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           ++ +F+ +IS + R  G FE V  ++ ++   GC    + +   +    +     +  E 
Sbjct: 298 NIVTFNTLISYLCR-NGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEI 356

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE---TQLP-NFLSFNIALCNLCK 197
            + M  +G  PN    N ++  L    R +   ++L E      P + ++FNI +   C+
Sbjct: 357 LNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQ 416

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              V  V +++  M+  G  P+V  +  ++N FCK G I EA  LL  M   G   +  +
Sbjct: 417 NGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTIS 476

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T+++ G     R   A  L  +M+Q GC  N +T+ +LI    +  +   A   L  + 
Sbjct: 477 YTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQML 536

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G +PDL+ ++ +ID L K G  D+AL++ + ++   + P++  + S+ S +   GR +
Sbjct: 537 VNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRIN 596

Query: 378 LLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
            + ++   ++   + +D V+YNA++S  CK G   +A++    M+  G  P+  ++  L+
Sbjct: 597 KVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILI 656

Query: 435 RGLCGARKIDEA 446
           RGL     + EA
Sbjct: 657 RGLASEGFVKEA 668



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/288 (19%), Positives = 112/288 (38%), Gaps = 39/288 (13%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           R+E    ++ E+    C +   TF + +  + +  +   V+E  ++M   G  P+     
Sbjct: 384 RWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYT 443

Query: 159 IVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
            V++   K G +D  + +LK        PN +S+ I L  LC      + +D++  M+++
Sbjct: 444 TVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQ 503

Query: 215 GFYPNVRMFEILLNCFCK-----------------------------------MGRIAEA 239
           G   N   F  L+N  CK                                    G+  EA
Sbjct: 504 GCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEA 563

Query: 240 YQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG 299
            +LL +M+  G S +   ++ +     R  R++    +++ +       + V Y ++I  
Sbjct: 564 LELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISS 623

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
             +      A  FL  + S G  P+   + +LI  L+  G   +A ++
Sbjct: 624 LCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEM 671



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/211 (22%), Positives = 88/211 (41%), Gaps = 4/211 (1%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG 173
           GC     ++ + L+     E +    +   +M + G   N    N +++ L K G V+  
Sbjct: 469 GCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQA 528

Query: 174 IKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
           I++LK+  +    P+ +S++  +  L K        +++ +MV KG  PN  ++  + + 
Sbjct: 529 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASA 588

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
             + GRI +  Q+   +           +  +I    +    + A      MV +GC PN
Sbjct: 589 LSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPN 648

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
             TYT LI+G         A   L  L S+G
Sbjct: 649 ESTYTILIRGLASEGFVKEAQEMLTELCSKG 679



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/245 (20%), Positives = 104/245 (42%), Gaps = 9/245 (3%)

Query: 360 SYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
           S    SL+ ++C +GR +   + +      A +V YNA+++ +C+AG    A +L   + 
Sbjct: 95  SVRLSSLIRSLCAAGRTAEAARALSAAGGGAGVVAYNAMVAGYCRAGQLESARRLAAAV- 153

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
                P+ Y++  ++R LC   +I +A+ V   +     A    ++  I++     G   
Sbjct: 154 --PVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFR 211

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
            A+++          LDV +  + +  + + G  +EA  L   +      P+  +Y  +L
Sbjct: 212 SAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVL 271

Query: 540 LSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK---FHSSSSAVNQLVEMCNL 596
              C  +    V+ L+++++      +  T   L  ++ +   F      + Q+VE    
Sbjct: 272 KGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEH--- 328

Query: 597 GLIPD 601
           G  PD
Sbjct: 329 GCTPD 333


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 107/439 (24%), Positives = 216/439 (49%), Gaps = 7/439 (1%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALC 193
            ++ F EM +    P+    N ++  + K+ + DL I + +  Q      +  S+NI + 
Sbjct: 48  AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILIN 107

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
             C+ + +     V+G M++ G+ P++     LLN +C   RI+EA  L+  M  +    
Sbjct: 108 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQP 167

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
           +   +  LI G     +   A  L ++MV  GC P++ TY +++ G  +     +A S L
Sbjct: 168 NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 227

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
             +E      D+V +  +ID L    + +DAL+++  +    + P+  T+ SL+  +C  
Sbjct: 228 KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 287

Query: 374 GRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           GR+S   +L+  +   ++  ++V ++AL+  F K G   +A KLY+ M+ +   PD +++
Sbjct: 288 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 347

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             L+ G C   ++DEA ++++ ++  +   N   +  ++    +A R  + ++LFR    
Sbjct: 348 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ 407

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
                + V+Y   I+GL + G  + A  ++ +M    VPP+  TY ++L   CK   ++ 
Sbjct: 408 RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEK 467

Query: 551 VKRLLQDVIDARIELDYHT 569
              + + +  +++E D +T
Sbjct: 468 ALVVFEYLQKSKMEPDIYT 486



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/471 (23%), Positives = 222/471 (47%), Gaps = 10/471 (2%)

Query: 83  VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF 142
           +  F+ ++S + ++  +F+ V  +   +  +       ++ + +  + R     + L   
Sbjct: 64  IVEFNKLLSAIAKMN-KFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVL 122

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKL 198
            +M + G+ P+    + +++      R+   + ++ +  +    PN ++FN  +  L   
Sbjct: 123 GKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLH 182

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
           N  S    +I  MV +G  P++  +  ++N  CK G I  A  LL  M        V  +
Sbjct: 183 NKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 242

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL-DMLE 317
           T +ID     + ++ A  L+ +M   G  PNVVTY SLI+       +S A   L DM+E
Sbjct: 243 TTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 302

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
            + + P++V  + LID   K G   +A  +YD +++  + PD +T+ SL++  C+  R  
Sbjct: 303 RKIN-PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 361

Query: 378 LLP---KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
                 +L+   +   ++V YN L+  FCKA    + ++L+  M  +G   +  ++  L+
Sbjct: 362 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 421

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
           +GL  A   D A  +++ +V +    +   ++ ++D L + G+  KA+ +F      K  
Sbjct: 422 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 481

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
            D+ +Y + I G+ + G+ E+ + L+  +    V PN   Y  M+  FC++
Sbjct: 482 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 532



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 185/404 (45%), Gaps = 42/404 (10%)

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK-------ETQLPNFLSFNIALCNL 195
           D M   G  P+ F    V++ L K G +DL + +LK       E  +  + +   ALCN 
Sbjct: 193 DRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNY 252

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
             +ND  N+      M  KG  PNV  +  L+ C C  GR ++A +LL  MI    + +V
Sbjct: 253 KNVNDALNL---FTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 309

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
             ++ LID F +  +L  A  L+++M++    P++ TY+SLI GF        A    ++
Sbjct: 310 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 369

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
           + S+   P++V +N LI    K    ++ ++++  + +  LV ++               
Sbjct: 370 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT--------------- 414

Query: 376 FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
                            V YN L+    +AG  + A K++  M+  G  PD  ++  LL 
Sbjct: 415 -----------------VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 457

Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
           GLC   K+++A+ V++ +  +    + + +  +++ + +AG+      LF    ++    
Sbjct: 458 GLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 517

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
           +V+ YT  I G    G  EEA  L+ +MK     PN+ TY  ++
Sbjct: 518 NVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 561



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 107/447 (23%), Positives = 199/447 (44%), Gaps = 33/447 (7%)

Query: 155 FARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
            +RN+++D+      VDL  ++++   LP+ + FN  L  + K+N    V  +   M   
Sbjct: 35  LSRNVLLDLKLD-DAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNL 93

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
               ++  + IL+NCFC+  ++  A  +LG M+ LG    +   + L++G+   +R+  A
Sbjct: 94  RISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEA 153

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             L ++M      PN VT+ +LI G       S A + +D + + G  PDL  +  +++ 
Sbjct: 154 VALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNG 213

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVV 394
           L K G  D AL                               SLL K+  G ++EAD+V+
Sbjct: 214 LCKRGDIDLAL-------------------------------SLLKKMEKG-KIEADVVI 241

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           Y  ++   C     N A+ L+  M +KG  P+  ++  L+R LC   +  +A  +   ++
Sbjct: 242 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 301

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
                 N    +A++D  ++ G+  +A +L+   I      D+ +Y+  I G     R +
Sbjct: 302 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 361

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLT 574
           EA  ++  M      PN  TY  ++  FCK + ++    L +++    +  +  T   L 
Sbjct: 362 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 421

Query: 575 KFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           + +F+      A     +M + G+ PD
Sbjct: 422 QGLFQAGDCDMAQKIFKKMVSDGVPPD 448



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 68/290 (23%), Positives = 131/290 (45%), Gaps = 36/290 (12%)

Query: 151 TPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKD 206
            PN    + ++D   K G++     L  +++K +  P+  +++  +   C  + +   K 
Sbjct: 306 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 365

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
           +  +M+ K  +PNV  +  L+  FCK  R+ E  +L   M   G   +   +  LI G  
Sbjct: 366 MFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLF 425

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
           +    DMA  +++KMV +G  P+++TY+ L+ G  +      A    + L+     PD+ 
Sbjct: 426 QAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIY 485

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL 386
            +N++I+ + K G  +D  D+               FCSL     L G            
Sbjct: 486 TYNIMIEGMCKAGKVEDGWDL---------------FCSL----SLKG------------ 514

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
            V+ ++++Y  ++S FC+ G   +A  L+  M + G  P++ ++  L+R 
Sbjct: 515 -VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 563



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 88/189 (46%), Gaps = 4/189 (2%)

Query: 115 CVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI 174
           C     T+   ++ + + +     +E F EM + G   NT   N ++  LF+ G  D+  
Sbjct: 375 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 434

Query: 175 KVLK----ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCF 230
           K+ K    +   P+ ++++I L  LCK   +     V   + +    P++  + I++   
Sbjct: 435 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 494

Query: 231 CKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNV 290
           CK G++ + + L   +   G   +V  +T +I GF R    + A  L+ +M ++G  PN 
Sbjct: 495 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNS 554

Query: 291 VTYTSLIKG 299
            TY +LI+ 
Sbjct: 555 GTYNTLIRA 563


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 141/569 (24%), Positives = 249/569 (43%), Gaps = 37/569 (6%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVV--TRLTGRFETVRGIVGELARVGCVIKAQTFL 123
           ALSFF W A +  + H+V S+  M++++   RL G  E +R     + +  C I+   F+
Sbjct: 84  ALSFFNWIALRPGFKHNVHSYSSMLNILIRARLLGVAEKIRI---SMIKSCCSIEDVLFV 140

Query: 124 L--FLRIYWRGEM--------YGMVLEAF------DEMGRF-------GFTPNTFARNIV 160
           L  F ++   GE         Y  +L +       DEM            +PN +  N +
Sbjct: 141 LEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAM 200

Query: 161 MDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
           ++   KIG V        K+++    P+  ++   +   C+   V N  +V  +M +KG 
Sbjct: 201 VNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGC 260

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
             N   +  L++  C+ GRI EA +L   M       +V  +TVLI       R   A  
Sbjct: 261 QRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALN 320

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           L+ +M + GC PNV TYT LI G  +      A   L  +  +G  P +V +N LID   
Sbjct: 321 LFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYC 380

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADL 392
           K G  DDA ++ D +      P++ T+  L+  +C   +     +LL K++   ++   L
Sbjct: 381 KEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKML-ERKLSPSL 439

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           + YN+L+   CK      A +L + M + G  PD +++   +  LC   +++EA  ++  
Sbjct: 440 ITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDS 499

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           +       N  ++TA++D   + G+   A  L  R + +    +  +Y V I GL +  +
Sbjct: 500 VKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKK 559

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
            +EA  L ++M  + V P   TY +++    K+       ++   ++    + D  T   
Sbjct: 560 MKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTA 619

Query: 573 LTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
                F         + + +M   G++PD
Sbjct: 620 FLHAYFSQGMLEEVDDVIAKMNEEGILPD 648



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 114/477 (23%), Positives = 210/477 (44%), Gaps = 25/477 (5%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           K++    +V ++  +I  + +   + +  R ++ E++  G +    T+   +  Y +  M
Sbjct: 326 KEKGCEPNVHTYTVLIDGLCK-ENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGM 384

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNI 190
                E  D M      PNT   N ++  L K  +V   +    K+L+    P+ +++N 
Sbjct: 385 IDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNS 444

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +   CK+ND+ +   ++ +M   G  P+   + + ++  CK GR+ EA  L   +   G
Sbjct: 445 LIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKG 504

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
              +   +T LIDG+ ++ ++D+A  L E+M+ + C PN  TY  LI+G  + K    A 
Sbjct: 505 VKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEAS 564

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
           S +  + + G  P +V + +LI  + K G++D AL V++ ++ L   PD  T+ + L   
Sbjct: 565 SLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAY 624

Query: 371 CLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
              G    +  ++  +  E    DLV Y  L+  + + G  ++A      M+D G  P  
Sbjct: 625 FSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSL 684

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
           Y    L++ L    ++ E                + +    V   +E      A++LF +
Sbjct: 685 YIVSILIKNLSHENRMKE--------------TRSEIGIDSVSNTLEY---EIALKLFEK 727

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
            +     +DV  Y   I G  +  R EEA  L   MK   + P+   Y  +L   CK
Sbjct: 728 MVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCK 784



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/411 (23%), Positives = 182/411 (44%), Gaps = 36/411 (8%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALC 193
            L+ F +M      P      +++  L   GR    + +  E +     PN  ++ + + 
Sbjct: 283 ALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLID 342

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
            LCK N +   + ++  M  KG  P+V  +  L++ +CK G I +A+++L LM +     
Sbjct: 343 GLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGP 402

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
           +   +  LI G  + R++  A  L  KM++   SP+++TY SLI G  +      A+  L
Sbjct: 403 NTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLL 462

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
            ++   G  PD   ++V ID L K G  ++A  ++D                        
Sbjct: 463 SLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDS----------------------- 499

Query: 374 GRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
                    V    V+A+ V+Y AL+  +CK G  + A  L   ML+    P++Y++  L
Sbjct: 500 ---------VKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVL 550

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           + GLC  +K+ EA ++   ++          +T ++  +++ G    A+++F   +   Y
Sbjct: 551 IEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGY 610

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
             DV +YT  +      G  EE   + ++M    + P+  TY V++  + +
Sbjct: 611 QPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYAR 661



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 99/424 (23%), Positives = 172/424 (40%), Gaps = 33/424 (7%)

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLND 200
           M   G  P+ +  ++ +D L K GRV+    +    +      N + +   +   CK+  
Sbjct: 465 MNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGK 524

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
           +     ++  M+     PN   + +L+   CK  ++ EA  L+  M+T+G   +V  +T+
Sbjct: 525 IDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTI 584

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           LI    +    D A  ++  MV  G  P+V TYT+ +  +    M       +  +  EG
Sbjct: 585 LIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEG 644

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----- 375
             PDLV + VLID  +++G    A D    +++    P  Y    L+  +    R     
Sbjct: 645 ILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETR 704

Query: 376 -----------------FSLLPKLV---CGLEVEADLVVYNALLSYFCKAGFPNQAVKLY 415
                              L  K+V   C +    D+ +Y AL++ FC+     +A  L 
Sbjct: 705 SEIGIDSVSNTLEYEIALKLFEKMVEHGCTI----DVSIYGALIAGFCQQERLEEAQGLV 760

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
           + M ++G +P    +  LL   C      EA+ +   +V N        +  +V  L   
Sbjct: 761 HHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIE 820

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
           G   KA  +F   +   Y  D V++ V I GLL+    +E   L   M+     PN  TY
Sbjct: 821 GSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTY 880

Query: 536 RVML 539
            +++
Sbjct: 881 SLLI 884



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/365 (20%), Positives = 153/365 (41%), Gaps = 25/365 (6%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G+ +    ++  +    C+  + T+ + +    + +          +M   G  P     
Sbjct: 523 GKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTY 582

Query: 158 NIVMDVLFKIGRVDLGIKVLKET----QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
            I++  + K G  D  +KV          P+  ++   L        +  V DVI  M  
Sbjct: 583 TILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNE 642

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL-- 271
           +G  P++  + +L++ + ++G    A+  L  M+  G   S+   ++LI       R+  
Sbjct: 643 EGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKE 702

Query: 272 ----------------DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
                           ++A  L+EKMV++GC+ +V  Y +LI GF + +    A   +  
Sbjct: 703 TRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHH 762

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
           ++  G +P    +N L+DC  K+G Y +A+ + D ++E  L+P   ++  L+  + + G 
Sbjct: 763 MKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGS 822

Query: 376 FSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
                 +  GL       D V +  L+    K    ++  +L + M +KG  P+  ++  
Sbjct: 823 NEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSL 882

Query: 433 LLRGL 437
           L+ GL
Sbjct: 883 LIEGL 887



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 87/401 (21%), Positives = 180/401 (44%), Gaps = 26/401 (6%)

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
           +R GF  NV  +  +LN   +   +  A ++   MI   +  S+     +++ FR++   
Sbjct: 93  LRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIK--SCCSIEDVLFVLEVFRKM--- 147

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF-SIAFSFLDMLESEGHAPDLVFHNV 330
           +  G    K       P +  Y +++    +  +   +   +L++L ++  +P++   N 
Sbjct: 148 NADGEFKFK-------PTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQ-ISPNIYTFNA 199

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-------FSLLPKLV 383
           +++   K+G+  +A      +++  L PD++T+ SL+   C +         F ++P+  
Sbjct: 200 MVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKG 259

Query: 384 CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
           C    + + V Y  L+   C+AG  N+A+KL+  M +    P   ++  L+  L G+ + 
Sbjct: 260 C----QRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRK 315

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
            EA+N++  +       N H +T ++D L +  +  +A ++      +     VV+Y   
Sbjct: 316 VEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNAL 375

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           I G  + G  ++A+ +   M+  +  PN  TY  ++   CK+R +     LL  +++ ++
Sbjct: 376 IDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKL 435

Query: 564 ELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMW 604
                T   L     K +   SA   L  M   GL+PD+ W
Sbjct: 436 SPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQ-W 475



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/305 (22%), Positives = 117/305 (38%), Gaps = 87/305 (28%)

Query: 75  KQRDYFHDVQSFDHMISV-----VTRLT---------GRFETVRGIVGELARVGCVIKAQ 120
           K   + H ++ F+HM+S+     V   T         G  E V  ++ ++   G +    
Sbjct: 591 KDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLV 650

Query: 121 TFLLFLRIYWRGEMYGMVLEAFD---EMGRFGFTPNTFARNIVMDVL-----FKIGRVDL 172
           T+ + +  Y R    G+   AFD    M   G  P+ +  +I++  L      K  R ++
Sbjct: 651 TYTVLIDGYAR---LGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEI 707

Query: 173 GIKVLKETQLPNFLSFNIAL----------CNL------------CKLNDVSNVKDVIGM 210
           GI       + N L + IAL          C +            C+   +   + ++  
Sbjct: 708 GID-----SVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHH 762

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI----------------------- 247
           M  +G  P+  ++  LL+C CK+G  AEA +L+  M+                       
Sbjct: 763 MKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGS 822

Query: 248 ------------TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
                       + G +    AW VLIDG  +   +D    L + M + GC PN +TY+ 
Sbjct: 823 NEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSL 882

Query: 296 LIKGF 300
           LI+G 
Sbjct: 883 LIEGL 887


>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Glycine max]
          Length = 905

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 125/488 (25%), Positives = 229/488 (46%), Gaps = 26/488 (5%)

Query: 79  YFHDVQS---------FDHMISVVTRLTGRFETVRGIVGEL---ARVGCVIKAQTFLL-F 125
           +FH+++S         F  MI V+ +   R +    +  EL     V CV    T ++ +
Sbjct: 294 FFHELKSQGLVPDDVTFTSMIGVLCK-AERVDEAVELFEELDSNKSVPCVYAYNTMIMGY 352

Query: 126 LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL--- 182
             +    E Y ++    +   R G  P+  A N ++  L + G+V+  +++L+  ++   
Sbjct: 353 GSVGKFNEAYSLL----ERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAA 408

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           PN  S+NI +  LCK  ++     V   M   G +PN+    I+++  CK  R+ EA  +
Sbjct: 409 PNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSI 468

Query: 243 -LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
            LGL   + T  SV  +  LIDG  R  +++ A  L+EKM+ +G +PN V YTSLI+ F 
Sbjct: 469 FLGLDHKVCTPDSVT-FCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFF 527

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           +             +   G +PDL+  N  +DC+ K G  +    +++ +    L PD  
Sbjct: 528 KCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVR 587

Query: 362 TFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           ++  L+  +   G      KL   ++ +    D   YN ++  FCK+G  N+A +L   M
Sbjct: 588 SYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEM 647

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
             KG  P   ++  ++ GL    ++DEA  +++        +N  V+++++D   + GR 
Sbjct: 648 KTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRI 707

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            +A  +    + +    +  ++   +  L++    +EA + +  MK++  PPN  TY +M
Sbjct: 708 DEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIM 767

Query: 539 LLSFCKER 546
           +   CK R
Sbjct: 768 VNGLCKVR 775



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 117/556 (21%), Positives = 234/556 (42%), Gaps = 42/556 (7%)

Query: 44  FPIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETV 103
           F  +  P +V   +       +AL +F W  ++    H  ++++ ++ ++ R T   E +
Sbjct: 93  FDEMPQPELVVGVIRRLKDVRVALHYFRWVERKTKQLHSPEAYNALLMLMAR-TRNLEYL 151

Query: 104 RGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDV 163
             I+ E++  G      T +  +  + +           + M +F F P   A   ++  
Sbjct: 152 EQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGA 211

Query: 164 LFKIGRVDLGIKVLKETQLPNFLS----FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN 219
           L      D  + +L++ Q   +      F   +C   +   V     ++  M    F  +
Sbjct: 212 LSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNAD 271

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
           + ++ + ++CF K+G++  A++    + + G       +T +I    +  R+D A  L+E
Sbjct: 272 LVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFE 331

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG------------------- 320
           ++  N   P V  Y ++I G+     F+ A+S L+  + +G                   
Sbjct: 332 ELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKG 391

Query: 321 ---------------HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
                           AP+L  +N+LID L K G  + AL V D + E  L P+  T   
Sbjct: 392 KVEEALRILEAMKMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNI 451

Query: 366 LLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
           ++  +C + R      +  GL+      D V + +L+    + G  N A  LY  MLD G
Sbjct: 452 MIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSG 511

Query: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI 482
            TP+   +  L+R      + ++   +Y+ ++    + +  +    +D + +AG   K  
Sbjct: 512 QTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGR 571

Query: 483 QLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
            LF     +    DV SY++ I GL++GG +++ Y L+ +MK   +  +   Y +++  F
Sbjct: 572 ALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGF 631

Query: 543 CKERNIKMVKRLLQDV 558
           CK   +    +LL+++
Sbjct: 632 CKSGKVNKAYQLLEEM 647



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 131/591 (22%), Positives = 240/591 (40%), Gaps = 56/591 (9%)

Query: 67  LSFFIWCAKQRDYFHDVQS-----FDHMISVVTRLTGRFETVR------GIVGELARVGC 115
           ++ F+   K R+ F  +++     F    S  T L G             ++ ++  +G 
Sbjct: 174 VASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGY 233

Query: 116 VIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIK 175
            +    F   + ++ R       L   DEM    F  +    N+ +D   K+G+VD+  K
Sbjct: 234 EVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWK 293

Query: 176 VLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFC 231
              E +    +P+ ++F   +  LCK   V    ++   +      P V  +  ++  + 
Sbjct: 294 FFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYG 353

Query: 232 KMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVV 291
            +G+  EAY LL      G   SV A+  ++    R  +++ A  + E M  +  +PN+ 
Sbjct: 354 SVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDA-APNLT 412

Query: 292 TYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGL 351
           +Y  LI    +A     A    D ++  G  P+++  N++ID L K    D+A  ++ GL
Sbjct: 413 SYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGL 472

Query: 352 LELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGF 407
                 PDS TFCSL+  +   G+    + L  K++   +   + VVY +L+  F K G 
Sbjct: 473 DHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQT-PNAVVYTSLIRNFFKCGR 531

Query: 408 PNQAVKLYNTMLDKGFTPD-----NY------------------------------SFVG 432
                K+Y  M+ +G +PD     NY                              S+  
Sbjct: 532 KEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSI 591

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           L+ GL       +   ++  +      ++   +  ++D   ++G+ +KA QL      + 
Sbjct: 592 LIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKG 651

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVK 552
               VV+Y   I GL +  R +EAY+L+ + K  AV  N   Y  ++  F K   I    
Sbjct: 652 LQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAY 711

Query: 553 RLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
            +L++++   +  + +T   L   + K      A+     M NL   P+E+
Sbjct: 712 LILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEV 762



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 169/356 (47%), Gaps = 13/356 (3%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           + EM   G +P+    N  MD +FK G ++ G  + +E +     P+  S++I +  L K
Sbjct: 539 YKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVK 598

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
                +   +   M  +G + + R + I+++ FCK G++ +AYQLL  M T G   +V  
Sbjct: 599 GGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVT 658

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  +IDG  ++ RLD A  L+E+        NVV Y+SLI GF +      A+  L+ L 
Sbjct: 659 YGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELM 718

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
            +G  P+    N L+D L K    D+AL  +  +  LK  P+  T+  +++ +C   +F+
Sbjct: 719 QKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFN 778

Query: 378 ---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
              +  + +    ++ + + Y  ++S   + G   +A  L+      G  PD+  +  ++
Sbjct: 779 KAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMI 838

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
            GL  A K  +A  +++   +    + +     ++D L      HKA  L + AIV
Sbjct: 839 EGLSNANKAMDAYILFEETRLKGCRIYSKTCVVLLDAL------HKADCLEQAAIV 888



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/400 (23%), Positives = 186/400 (46%), Gaps = 11/400 (2%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           +++M   G TPN      ++   FK GR + G K+ KE       P+ +  N  +  + K
Sbjct: 504 YEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFK 563

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
             ++   + +   +  +G  P+VR + IL++   K G   + Y+L   M   G  L   A
Sbjct: 564 AGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRA 623

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           + ++IDGF +  +++ A  L E+M   G  P VVTY S+I G  +      A+   +  +
Sbjct: 624 YNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 683

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
           S+    ++V ++ LID   K+G  D+A  + + L++  L P++YT+  LL  +  +    
Sbjct: 684 SKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEID 743

Query: 378 LLPKLVC-----GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
               LVC      L+   + V Y+ +++  CK    N+A   +  M  +G  P+  ++  
Sbjct: 744 --EALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTT 801

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           ++ GL     + EA ++++    +    ++  + A+++ L  A +   A  LF    ++ 
Sbjct: 802 MISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKG 861

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
             +   +  V +  L +    E+A I+ + ++ +A   +A
Sbjct: 862 CRIYSKTCVVLLDALHKADCLEQAAIVGAVLREMAKSQHA 901



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/431 (22%), Positives = 186/431 (43%), Gaps = 8/431 (1%)

Query: 178 KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIA 237
           K  QL +  ++N  L  + +  ++  ++ ++  M   GF P+      ++  F K  ++ 
Sbjct: 125 KTKQLHSPEAYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLR 184

Query: 238 EAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLI 297
           EA+ ++  M       + +A+T LI         D    L  +M + G    V  +T+LI
Sbjct: 185 EAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLI 244

Query: 298 KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
             F        A S LD ++S     DLV +NV IDC  K+G  D A   +  L    LV
Sbjct: 245 CVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLV 304

Query: 358 PDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEAD---LVVYNALLSYFCKAGFPNQAVKL 414
           PD  TF S++  +C + R     +L   L+       +  YN ++  +   G  N+A  L
Sbjct: 305 PDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSL 364

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
                 KG  P   ++  +L  L    K++EA+ + + + M + A N   +  ++D L +
Sbjct: 365 LERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKM-DAAPNLTSYNILIDMLCK 423

Query: 475 AGRCHKAIQLFRRAIVEK--YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
           AG    A+++ + ++ E   +P ++++  + I  L +  R +EA  ++  + H    P++
Sbjct: 424 AGELEAALKV-QDSMKEAGLFP-NIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDS 481

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVE 592
            T+  ++    +   +     L + ++D+    +      L +  FK            E
Sbjct: 482 VTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKE 541

Query: 593 MCNLGLIPDEM 603
           M + G  PD M
Sbjct: 542 MMHRGCSPDLM 552


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 141/504 (27%), Positives = 229/504 (45%), Gaps = 43/504 (8%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNL 195
           E  +EM  FGF P+  A + ++D L K G +    DL  KV K    P+   +N  + ++
Sbjct: 306 EMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSM 365

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
           CK   +   + +   M  KG +PN   + IL++ FCK G++  A   LG M  +G   +V
Sbjct: 366 CKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATV 425

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
             ++ LI G  +L +L  A  L+++M+ NG  PNVV YTSLI G+ +      AF     
Sbjct: 426 YPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHE 485

Query: 316 LESEG----------------HA-------------------PDLVFHNVLIDCLSKMGS 340
           +  +G                HA                   P+ V +NVLI+   K G+
Sbjct: 486 MTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGN 545

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNA 397
              A ++ D ++E  LVPD+YT+  L+S +C +GR S   + +  L+ E    + + ++A
Sbjct: 546 TVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSA 605

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
           LL  +CK G  + A+     ML +G   D   +  L+ G+   +     I++ + +    
Sbjct: 606 LLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQG 665

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAY 517
              +  ++T ++D   +AG    A  L+   + E    +VV+YT  I GL + G  ++A 
Sbjct: 666 LRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAE 725

Query: 518 ILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFI 577
           +L  +M      PN  TY   L     E NI+   + L DV+      +  T   L +  
Sbjct: 726 LLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQ-LHDVLLEGFLANTVTYNILIRGF 784

Query: 578 FKFHSSSSAVNQLVEMCNLGLIPD 601
            K      A   LV M + G+ PD
Sbjct: 785 CKLGRIQEAAEVLVNMIDSGISPD 808



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 117/460 (25%), Positives = 210/460 (45%), Gaps = 9/460 (1%)

Query: 100 FETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNI 159
           F   R ++G +   GC +   T+ +F+R   + +     +E  + +   G   +      
Sbjct: 231 FIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCT 290

Query: 160 VMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLC----KLNDVSNVKDVIGMMVRKG 215
           ++  L K+   + G +++ E     F+    A+ NL     K  ++ +  D++  + + G
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350

Query: 216 FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAG 275
             P++ ++  L+N  CK G++ EA  L   M   G   +   +++LID F +  +LD+A 
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVAL 410

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
           +   KM + G    V  Y+SLI G  +      A S  D + + G  P++V +  LI   
Sbjct: 411 HFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGY 470

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADL--- 392
            K G   +A  +Y  +    + P++YTF +L+S +C + R +   KL  G  VE ++   
Sbjct: 471 CKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLF-GEMVEWNVIPN 529

Query: 393 -VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
            V YN L+   CK G   +A +L + M++KG  PD Y++  L+ GLC   ++ EA     
Sbjct: 530 EVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMN 589

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
            +      +N    +A++    + GR   A+   R  +     +D+V Y+V I G+L   
Sbjct: 590 DLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQ 649

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
                  L  QM    + P+   Y  M+ +  K  N+KM 
Sbjct: 650 DRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMA 689



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 115/467 (24%), Positives = 203/467 (43%), Gaps = 43/467 (9%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL-KETQL---PNFLSFNIALCNLCK 197
           F+ MG  G  PN    +I++D   K G++D+ +  L K T++        ++  +   CK
Sbjct: 378 FNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCK 437

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
           L  +   K +   M+  G  PNV ++  L++ +CK G +  A++L   M   G S +   
Sbjct: 438 LGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYT 497

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T LI G     R+  A  L+ +MV+    PN VTY  LI+G  +      AF  LD + 
Sbjct: 498 FTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMV 557

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF- 376
            +G  PD   +  LI  L   G   +A +  + L   +   +   F +LL   C  GR  
Sbjct: 558 EKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLD 617

Query: 377 ------------SLLPKLVC-------------------------GLEVEADLVVYNALL 399
                        +   LVC                            +  D V+Y  ++
Sbjct: 618 DALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMI 677

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
               KAG    A  L++ M+ +G  P+  ++  L+ GLC    +D+A  + + ++ +N  
Sbjct: 678 DANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSL 737

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            N + +   +D L   G   KAIQL    ++E +  + V+Y + IRG  + GR +EA  +
Sbjct: 738 PNQNTYACFLDYLTSEGNIEKAIQL-HDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEV 796

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
              M    + P+  +Y  ++  +C+  ++K   +L + +++  +  D
Sbjct: 797 LVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPD 843



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 114/481 (23%), Positives = 216/481 (44%), Gaps = 9/481 (1%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP----NFL 186
           R   + M L  FDE+   G  P+ +    V+  L ++       +V+   +      +  
Sbjct: 192 RIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVA 251

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           ++N+ +  LCK   V    ++  ++  KG   +V  +  L+   CK+       +++  M
Sbjct: 252 TYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEM 311

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
           I  G   S  A + L+DG R+   +  A  L  K+ + G +P++  Y +LI    +    
Sbjct: 312 IEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKL 371

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
             A S  + +  +G  P+ V +++LID   K G  D AL     + E+ +    Y + SL
Sbjct: 372 DEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSL 431

Query: 367 LSTVCLSGRF----SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
           +S  C  G+     SL  +++    ++ ++V+Y +L+S +CK G  + A +LY+ M  KG
Sbjct: 432 ISGHCKLGKLRAAKSLFDEMIAN-GLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKG 490

Query: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI 482
            +P+ Y+F  L+ GLC A ++ EA  ++  +V  N   N   +  +++   + G   +A 
Sbjct: 491 ISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAF 550

Query: 483 QLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
           +L    + +    D  +Y   I GL   GR  EA    + ++      N   +  +L  +
Sbjct: 551 ELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGY 610

Query: 543 CKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
           CKE  +       ++++   + +D      L   I +     S ++ L +M + GL PD 
Sbjct: 611 CKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDN 670

Query: 603 M 603
           +
Sbjct: 671 V 671



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 105/469 (22%), Positives = 207/469 (44%), Gaps = 11/469 (2%)

Query: 83  VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWR-GEMYGMVLEA 141
           V  +  +IS   +L G+    + +  E+   G       +   +  Y + GE++      
Sbjct: 425 VYPYSSLISGHCKL-GKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHN-AFRL 482

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE----TQLPNFLSFNIALCNLCK 197
           + EM   G +PNT+    ++  L    R+    K+  E      +PN +++N+ +   CK
Sbjct: 483 YHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCK 542

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
             +     +++  MV KG  P+   +  L++  C  GR++EA + +  +      L+   
Sbjct: 543 EGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMC 602

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           ++ L+ G+ +  RLD A     +M+  G + ++V Y+ LI G +  +        L  + 
Sbjct: 603 FSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMH 662

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG--- 374
            +G  PD V +  +ID  +K G+   A  ++D ++    +P+  T+ +L++ +C  G   
Sbjct: 663 DQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMD 722

Query: 375 RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
           +  LL + +       +   Y   L Y    G   +A++L++ +L+ GF  +  ++  L+
Sbjct: 723 KAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILI 781

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
           RG C   +I EA  V   ++ +  + +   ++ I+      G   +AI+L+   +     
Sbjct: 782 RGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVN 841

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
            D V+Y   I G    G   +A+ L   M    V PN  TY  ++   C
Sbjct: 842 PDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 890



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 88/391 (22%), Positives = 173/391 (44%), Gaps = 3/391 (0%)

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
           LP   + +  L  L ++        +   +V  G  P+V ++  ++   C++     A +
Sbjct: 177 LPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRARE 236

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           ++G M + G  LSV  + V I G  + +R+  A  +   +   G   +V TY +L+ G  
Sbjct: 237 VIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLC 296

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           + + F      ++ +   G  P     + L+D L K G+   A D+ + + +  + P  +
Sbjct: 297 KVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLF 356

Query: 362 TFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTM 418
            + +L++++C  G+      L   +  +    + V Y+ L+  FCK G  + A+     M
Sbjct: 357 VYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKM 416

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
            + G     Y +  L+ G C   K+  A +++  ++ N    N  ++T+++    + G  
Sbjct: 417 TEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGEL 476

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
           H A +L+     +    +  ++T  I GL    R  EA  L+ +M    V PN  TY V+
Sbjct: 477 HNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVL 536

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
           +   CKE N      LL ++++  +  D +T
Sbjct: 537 IEGHCKEGNTVRAFELLDEMVEKGLVPDTYT 567



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/427 (23%), Positives = 185/427 (43%), Gaps = 38/427 (8%)

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
           RK  +     F++L+  + +  R  +   ++ LM+  G    +   + +++G  R+R+  
Sbjct: 138 RKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFR 197

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
           MA +L++++V +G  P+V  YT++++   E K F  A   +  +ES G    +  +NV I
Sbjct: 198 MALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFI 257

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF---------------- 376
             L K     +A+++ + L    L  D  T+C+L+  +C    F                
Sbjct: 258 RGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFV 317

Query: 377 ---SLLPKLVCGLE-------------------VEADLVVYNALLSYFCKAGFPNQAVKL 414
              + +  LV GL                    V   L VYNAL++  CK G  ++A  L
Sbjct: 318 PSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESL 377

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
           +N M  KG  P++ ++  L+   C   K+D A++    +         + +++++    +
Sbjct: 378 FNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCK 437

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
            G+   A  LF   I      +VV YT  I G  + G    A+ LY +M    + PN YT
Sbjct: 438 LGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYT 497

Query: 535 YRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMC 594
           +  ++   C    +    +L  ++++  +  +  T   L +   K  ++  A   L EM 
Sbjct: 498 FTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMV 557

Query: 595 NLGLIPD 601
             GL+PD
Sbjct: 558 EKGLVPD 564



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 96/216 (44%), Gaps = 9/216 (4%)

Query: 137 MVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIAL 192
           M    +D M   G  PN      +++ L KIG +D    L  ++L    LPN    N   
Sbjct: 688 MAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQ---NTYA 744

Query: 193 CNLCKLNDVSNVKDVIGM--MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
           C L  L    N++  I +  ++ +GF  N   + IL+  FCK+GRI EA ++L  MI  G
Sbjct: 745 CFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSG 804

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
            S    +++ +I  + R   L  A  LWE M+  G +P+ V Y  LI G       + AF
Sbjct: 805 ISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAF 864

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALD 346
              D +   G  P+   +N LI     M S     D
Sbjct: 865 ELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTAD 900



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 54/244 (22%), Positives = 107/244 (43%), Gaps = 5/244 (2%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALC 193
           +++   +M   G  P+      ++D   K G + +   +    + E  LPN +++   + 
Sbjct: 654 IIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALIN 713

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
            LCK+  +   + +   M+     PN   +   L+     G I +A QL  +++  G   
Sbjct: 714 GLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLA 772

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
           +   + +LI GF +L R+  A  +   M+ +G SP+ ++Y+++I  +        A    
Sbjct: 773 NTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLW 832

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           + + + G  PD V +N LI      G    A ++ D ++   + P+  T+ SL+   CL 
Sbjct: 833 ESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLM 892

Query: 374 GRFS 377
              S
Sbjct: 893 SSVS 896


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 107/439 (24%), Positives = 216/439 (49%), Gaps = 7/439 (1%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALC 193
            ++ F EM +    P+    N ++  + K+ + DL I + +  Q      +  S+NI + 
Sbjct: 64  AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILIN 123

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
             C+ + +     V+G M++ G+ P++     LLN +C   RI+EA  L+  M  +    
Sbjct: 124 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQP 183

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
           +   +  LI G     +   A  L ++MV  GC P++ TY +++ G  +     +A S L
Sbjct: 184 NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 243

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
             +E      D+V +  +ID L    + +DAL+++  +    + P+  T+ SL+  +C  
Sbjct: 244 KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 303

Query: 374 GRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           GR+S   +L+  +   ++  ++V ++AL+  F K G   +A KLY+ M+ +   PD +++
Sbjct: 304 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 363

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             L+ G C   ++DEA ++++ ++  +   N   +  ++    +A R  + ++LFR    
Sbjct: 364 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ 423

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
                + V+Y   I+GL + G  + A  ++ +M    VPP+  TY ++L   CK   ++ 
Sbjct: 424 RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEK 483

Query: 551 VKRLLQDVIDARIELDYHT 569
              + + +  +++E D +T
Sbjct: 484 ALVVFEYLQKSKMEPDIYT 502



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 111/471 (23%), Positives = 222/471 (47%), Gaps = 10/471 (2%)

Query: 83  VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF 142
           +  F+ ++S + ++  +F+ V  +   +  +       ++ + +  + R     + L   
Sbjct: 80  IVEFNKLLSAIAKMN-KFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVL 138

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKL 198
            +M + G+ P+    + +++      R+   + ++ +  +    PN ++FN  +  L   
Sbjct: 139 GKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLH 198

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
           N  S    +I  MV +G  P++  +  ++N  CK G I  A  LL  M        V  +
Sbjct: 199 NKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 258

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL-DMLE 317
           T +ID     + ++ A  L+ +M   G  PNVVTY SLI+       +S A   L DM+E
Sbjct: 259 TTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 318

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
            + + P++V  + LID   K G   +A  +YD +++  + PD +T+ SL++  C+  R  
Sbjct: 319 RKIN-PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377

Query: 378 LLP---KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
                 +L+   +   ++V YN L+  FCKA    + ++L+  M  +G   +  ++  L+
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
           +GL  A   D A  +++ +V +    +   ++ ++D L + G+  KA+ +F      K  
Sbjct: 438 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 497

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
            D+ +Y + I G+ + G+ E+ + L+  +    V PN   Y  M+  FC++
Sbjct: 498 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 548



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 185/404 (45%), Gaps = 42/404 (10%)

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK-------ETQLPNFLSFNIALCNL 195
           D M   G  P+ F    V++ L K G +DL + +LK       E  +  + +   ALCN 
Sbjct: 209 DRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNY 268

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
             +ND  N+      M  KG  PNV  +  L+ C C  GR ++A +LL  MI    + +V
Sbjct: 269 KNVNDALNL---FTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 325

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
             ++ LID F +  +L  A  L+++M++    P++ TY+SLI GF        A    ++
Sbjct: 326 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 385

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
           + S+   P++V +N LI    K    ++ ++++  + +  LV ++               
Sbjct: 386 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT--------------- 430

Query: 376 FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
                            V YN L+    +AG  + A K++  M+  G  PD  ++  LL 
Sbjct: 431 -----------------VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 473

Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
           GLC   K+++A+ V++ +  +    + + +  +++ + +AG+      LF    ++    
Sbjct: 474 GLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 533

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
           +V+ YT  I G    G  EEA  L+ +MK     PN+ TY  ++
Sbjct: 534 NVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 577



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 107/447 (23%), Positives = 199/447 (44%), Gaps = 33/447 (7%)

Query: 155 FARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
            +RN+++D+      VDL  ++++   LP+ + FN  L  + K+N    V  +   M   
Sbjct: 51  LSRNVLLDLKLD-DAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNL 109

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
               ++  + IL+NCFC+  ++  A  +LG M+ LG    +   + L++G+   +R+  A
Sbjct: 110 RISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEA 169

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             L ++M      PN VT+ +LI G       S A + +D + + G  PDL  +  +++ 
Sbjct: 170 VALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNG 229

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVV 394
           L K G  D AL                               SLL K+  G ++EAD+V+
Sbjct: 230 LCKRGDIDLAL-------------------------------SLLKKMEKG-KIEADVVI 257

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           Y  ++   C     N A+ L+  M +KG  P+  ++  L+R LC   +  +A  +   ++
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
                 N    +A++D  ++ G+  +A +L+   I      D+ +Y+  I G     R +
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLT 574
           EA  ++  M      PN  TY  ++  FCK + ++    L +++    +  +  T   L 
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437

Query: 575 KFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           + +F+      A     +M + G+ PD
Sbjct: 438 QGLFQAGDCDMAQKIFKKMVSDGVPPD 464



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 68/290 (23%), Positives = 131/290 (45%), Gaps = 36/290 (12%)

Query: 151 TPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKD 206
            PN    + ++D   K G++     L  +++K +  P+  +++  +   C  + +   K 
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 381

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
           +  +M+ K  +PNV  +  L+  FCK  R+ E  +L   M   G   +   +  LI G  
Sbjct: 382 MFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLF 441

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
           +    DMA  +++KMV +G  P+++TY+ L+ G  +      A    + L+     PD+ 
Sbjct: 442 QAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIY 501

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL 386
            +N++I+ + K G  +D  D+               FCSL     L G            
Sbjct: 502 TYNIMIEGMCKAGKVEDGWDL---------------FCSL----SLKG------------ 530

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
            V+ ++++Y  ++S FC+ G   +A  L+  M + G  P++ ++  L+R 
Sbjct: 531 -VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 579



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 88/189 (46%), Gaps = 4/189 (2%)

Query: 115 CVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI 174
           C     T+   ++ + + +     +E F EM + G   NT   N ++  LF+ G  D+  
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450

Query: 175 KVLK----ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCF 230
           K+ K    +   P+ ++++I L  LCK   +     V   + +    P++  + I++   
Sbjct: 451 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 510

Query: 231 CKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNV 290
           CK G++ + + L   +   G   +V  +T +I GF R    + A  L+ +M ++G  PN 
Sbjct: 511 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNS 570

Query: 291 VTYTSLIKG 299
            TY +LI+ 
Sbjct: 571 GTYNTLIRA 579


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 132/580 (22%), Positives = 254/580 (43%), Gaps = 45/580 (7%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTG--RFETVRGIVGELARVGCVIKAQTFL 123
           +++ F W   Q+ Y H   +FD    ++ +L     F+ +  ++ ++   G   +   F+
Sbjct: 85  SMAIFQWAGSQKGYCH---TFDVYHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFI 141

Query: 124 LFLRIYWRGEMYGMVLEAFDEM-GRFGFTPNTFARNIVMDVLFKIGRVDLGIKV----LK 178
             ++ Y R  + G       +M G +   P   + N+V+D+L       +   V    L 
Sbjct: 142 CIMKYYGRANLPGQATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLS 201

Query: 179 ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAE 238
           +  +P   +F + +  LC +N+V N   ++  M + G  PN  +++ L++   K  R+ E
Sbjct: 202 KGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNE 261

Query: 239 AYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTY----- 293
           A +LL  M  +G    V+ +  +I G  RL R+     L ++M+  G +PN +TY     
Sbjct: 262 ALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMN 321

Query: 294 --------------------------TSLIKGFMEAKMFSIAFSFL-DMLESEGHAPDLV 326
                                     T LI G++++     A +FL D +   G  PD+ 
Sbjct: 322 GLCRVGKVDEAQVLLNKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVF 381

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL 386
             N LI  L K G    A+D+ + +      P+  T+ +LL   C   +      ++  +
Sbjct: 382 TFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEM 441

Query: 387 EV---EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
                E +++ YN LL   CK G   +A+ +   M DKG  PD ++F  L+ GLC   + 
Sbjct: 442 SAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRK 501

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           ++A+ +Y+ ++++    N   +  ++   +  G   +A++L    +    PLD ++Y   
Sbjct: 502 EDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGL 561

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           I+   + G TE+A  L+ +M    + P+  +  +++   C+   +     LL+D+I   +
Sbjct: 562 IKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGL 621

Query: 564 ELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
             D  T   L   + K  +   A N   ++   G+ PD +
Sbjct: 622 APDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAI 661



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 117/466 (25%), Positives = 212/466 (45%), Gaps = 8/466 (1%)

Query: 84  QSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFD 143
           Q+  H +S   R+    +    ++ E+  +GC+    TF   +    R        +  D
Sbjct: 247 QTLIHALSKRDRVNEALK----LLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVD 302

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSN 203
            M   GFTPN     ++M+ L ++G+VD    +L +   PN + F I +    K   +  
Sbjct: 303 RMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVHFTILINGYVKSGRLDE 362

Query: 204 VKDVI-GMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLI 262
               +   M++ G  P+V  F  L++  CK G +  A  ++  M   G + ++  +T L+
Sbjct: 363 ANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLL 422

Query: 263 DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
           DGF +  +L+ AGY+  +M   G   N++ Y  L++   +      A   L  +  +G  
Sbjct: 423 DGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCK 482

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL 382
           PD+   N LI  L K+   +DAL +Y  +L   ++ ++ T+ +L+      G      KL
Sbjct: 483 PDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKL 542

Query: 383 VCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
           V  +       D + YN L+  FCK G   +A+ L++ M+ K   P N S   L+ GLC 
Sbjct: 543 VNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCR 602

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
             K+  A+ + + ++    A +   + ++++ L + G   +A  LF +   E    D ++
Sbjct: 603 VGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAIT 662

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
           Y   I      G  ++AY+L  +    A  PN  T+ +++ +F KE
Sbjct: 663 YNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIKE 708



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 127/516 (24%), Positives = 241/516 (46%), Gaps = 20/516 (3%)

Query: 37  CATTHQDFPIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRL 96
           C  T + + ++L   I+ S   NCPS  +A + F +    +     V +F  ++  +  +
Sbjct: 169 CEPTFKSYNVVL--DILVSA--NCPS--VAANVF-YEMLSKGVIPTVYTFGVVMKALC-M 220

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
               +    ++ ++ + GCV  +  +   +    + +     L+  +EM   G  P+   
Sbjct: 221 VNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDT 280

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N V+  L ++ R+  G K++         PN +++ + +  LC++  V   +    +++
Sbjct: 281 FNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQ----VLL 336

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLL-GLMITLGTSLSVNAWTVLIDGFRRLRRL 271
            K   PN   F IL+N + K GR+ EA   L   MI  G    V  +  LI G  +   +
Sbjct: 337 NKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLM 396

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
             A  +   M  NGC+PN++TYT+L+ GF +      A   L+ + ++G   +++ +NVL
Sbjct: 397 GSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVL 456

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE-- 389
           +  L K G    ALD+   + +    PD +TF +L+  +C   R      L   + ++  
Sbjct: 457 LRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGV 516

Query: 390 -ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
            A+ V YN L+  F + G   +A+KL N ML +G   D  ++ GL++  C     ++A+ 
Sbjct: 517 IANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALG 576

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           ++  +V  +   +      +++ L   G+   A++L R  I      DVV+Y   I GL 
Sbjct: 577 LFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLC 636

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
           + G   EA+ L+++++   + P+A TY  ++   C+
Sbjct: 637 KMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCR 672



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 108/411 (26%), Positives = 183/411 (44%), Gaps = 34/411 (8%)

Query: 69  FFIWCAKQRDYFHDV-------QSFDHMISVVTRLTGRFETVRGI-----VGELARVGCV 116
           F + C    D F+DV               +V R+  R  T   I     +  L RVG V
Sbjct: 270 FLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKV 329

Query: 117 IKAQTFL--------LFLRIYWRGEM-YGMVLEA----FDEMGRFGFTPNTFARNIVMDV 163
            +AQ  L        +   I   G +  G + EA    +D+M + G  P+ F  N ++  
Sbjct: 330 DEAQVLLNKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHG 389

Query: 164 LFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN 219
           L K G +   + ++ +       PN +++   L   CK N +     V+  M  KGF  N
Sbjct: 390 LCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELN 449

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
           +  + +LL   CK G++ +A  +LG M   G    +  +  LI G  ++ R + A  L+ 
Sbjct: 450 IMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYR 509

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
            M+ +G   N VTY +LI  F+       A   ++ +   G   D + +N LI    K+G
Sbjct: 510 DMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLG 569

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVY 395
           + + AL ++D ++   LVP + +   L++ +C  G+      LL  ++    +  D+V Y
Sbjct: 570 ATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMI-HRGLAPDVVTY 628

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
           N+L++  CK G   +A  L+N +  +G  PD  ++  L+   C A   D+A
Sbjct: 629 NSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDA 679


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 143/572 (25%), Positives = 253/572 (44%), Gaps = 43/572 (7%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVV--TRLTGRFETVRGIVGELARVGCVIKAQTFL 123
           ALSFF W A +  + H+V S+  M++++   RL G  E +R     + +  C I+   F+
Sbjct: 84  ALSFFNWIALRPGFKHNVHSYSSMLNILIRARLLGVAEKIRI---SMIKSCCSIEDVLFV 140

Query: 124 L--FLRIYWRGEM--------YGMVLEAF------DEMGRF-------GFTPNTFARNIV 160
           L  F ++   GE         Y  +L +       DEM            +PN +  N +
Sbjct: 141 LEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAM 200

Query: 161 MDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
           ++   KIG V        K+++    P+  ++   +   C+   V N  +V  +M +KG 
Sbjct: 201 VNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGC 260

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
             N   +  L++  C+ GRI EA +L   M       +V  +TVLI       R   A  
Sbjct: 261 QRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALN 320

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           L+ +M + GC PNV TYT LI G  +      A   L  +  +G  P +V +N LID   
Sbjct: 321 LFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYC 380

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADL 392
           K G  DDA ++ D +      P++ T+  L+  +C   +     +LL K++   ++   L
Sbjct: 381 KEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKML-ERKLSPSL 439

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           + YN+L+   CK      A +L + M + G  PD +++   +  LC   +++EA  ++  
Sbjct: 440 ITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDS 499

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           +       N  ++TA++D   + G+   A  L  R + +    +  +Y V I GL +  +
Sbjct: 500 VKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKK 559

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
            +EA  L ++M  + V P   TY +++    K+       ++   ++    + D  T   
Sbjct: 560 MKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCT--- 616

Query: 573 LTKFIFKFHSS---SSAVNQLVEMCNLGLIPD 601
            T F+  + S        + + +M   G++PD
Sbjct: 617 YTAFLHAYFSQGMLEEVDDVIAKMNEEGILPD 648



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 116/453 (25%), Positives = 207/453 (45%), Gaps = 13/453 (2%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           + +  R ++ E++  G +    T+   +  Y +  M     E  D M      PNT   N
Sbjct: 349 KMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYN 408

Query: 159 IVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
            ++  L K  +V   +    K+L+    P+ +++N  +   CK+ND+ +   ++ +M   
Sbjct: 409 ELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNEN 468

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           G  P+   + + ++  CK GR+ EA  L   +   G   +   +T LIDG+ ++ ++D+A
Sbjct: 469 GLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVA 528

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             L E+M+ + C PN  TY  LI+G  + K    A S +  + + G  P +V + +LI  
Sbjct: 529 YSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGE 588

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---D 391
           + K G++D AL V++ ++ L   PD  T+ + L      G    +  ++  +  E    D
Sbjct: 589 MLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPD 648

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
           LV Y  L+  + + G  ++A      M+D G  P  Y    L++ L    ++ E  +   
Sbjct: 649 LVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIG 708

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
              ++N  VN+ V  A V + +E      A++LF + +     +DV  Y   I G  +  
Sbjct: 709 IDSVSN--VNS-VDIADVWKTLEY---EIALKLFEKMVEHGCTIDVSIYGALIAGFCQQE 762

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
           R EEA  L   MK   + P+   Y  +L   CK
Sbjct: 763 RLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCK 795



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 97/411 (23%), Positives = 182/411 (44%), Gaps = 36/411 (8%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALC 193
            L+ F +M      P      +++  L   GR    + +  E +     PN  ++ + + 
Sbjct: 283 ALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLID 342

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
            LCK N +   + ++  M  KG  P+V  +  L++ +CK G I +A+++L LM +     
Sbjct: 343 GLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGP 402

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
           +   +  LI G  + R++  A  L  KM++   SP+++TY SLI G  +      A+  L
Sbjct: 403 NTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLL 462

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
            ++   G  PD   ++V ID L K G  ++A  ++D                        
Sbjct: 463 SLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDS----------------------- 499

Query: 374 GRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
                    V    V+A+ V+Y AL+  +CK G  + A  L   ML+    P++Y++  L
Sbjct: 500 ---------VKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVL 550

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           + GLC  +K+ EA ++   ++          +T ++  +++ G    A+++F   +   Y
Sbjct: 551 IEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGY 610

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
             DV +YT  +      G  EE   + ++M    + P+  TY V++  + +
Sbjct: 611 QPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYAR 661



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 100/400 (25%), Positives = 168/400 (42%), Gaps = 16/400 (4%)

Query: 136 GMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSF 188
           G V EA   FD +   G   N      ++D   K+G++D+      ++L +  LPN  ++
Sbjct: 488 GRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTY 547

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           N+ +  LCK   +     ++  M+  G  P V  + IL+    K G    A ++   M++
Sbjct: 548 NVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVS 607

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
           LG    V  +T  +  +     L+    +  KM + G  P++VTYT LI G+    +   
Sbjct: 608 LGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHR 667

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           AF FL  +   G  P L   ++LI  LS      +      G+  +  V +S     +  
Sbjct: 668 AFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEI-GIDSVSNV-NSVDIADVWK 725

Query: 369 TVCLSGRFSLLPKLV---CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
           T+       L  K+V   C +    D+ +Y AL++ FC+     +A  L + M ++G +P
Sbjct: 726 TLEYEIALKLFEKMVEHGCTI----DVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSP 781

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
               +  LL   C      EA+ +   +V N        +  +V  L   G   KA  +F
Sbjct: 782 SEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVF 841

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKH 525
              +   Y  D V++ V I GLL+    +E   L   M+ 
Sbjct: 842 HGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEE 881



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 84/391 (21%), Positives = 164/391 (41%), Gaps = 46/391 (11%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           + +    +V ++  +G      T+ + +    +   +   L+ F+ M   G+ P+     
Sbjct: 559 KMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYT 618

Query: 159 IVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
             +   F  G +    D+  K+ +E  LP+ +++ + +    +L       D +  MV  
Sbjct: 619 AFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDT 678

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           G  P++ +  IL+       R+ E    +G+      S+S N  +V I    +    ++A
Sbjct: 679 GCKPSLYIVSILIKNLSHENRMKETRSEIGI-----DSVS-NVNSVDIADVWKTLEYEIA 732

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             L+EKMV++GC+ +V  Y +LI GF + +    A   +  ++  G +P    +N L+DC
Sbjct: 733 LKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDC 792

Query: 335 LSKMGSYDDALDVYDGLLELKLVP--DSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADL 392
             K+G Y +A+ + D ++E  L+P  +SY                    LVCGL +E   
Sbjct: 793 CCKLGVYAEAVRLVDAMVENGLLPLLESYKL------------------LVCGLYIE--- 831

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
                        G   +A  +++ +L  G+  D  ++  L+ GL     +DE   +   
Sbjct: 832 -------------GSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDI 878

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
           +   +    A +  A + RL  A     A++
Sbjct: 879 MEEKDATAQADIACAALMRLAAANSTKGALE 909



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 87/401 (21%), Positives = 180/401 (44%), Gaps = 26/401 (6%)

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
           +R GF  NV  +  +LN   +   +  A ++   MI   +  S+     +++ FR++   
Sbjct: 93  LRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIK--SCCSIEDVLFVLEVFRKM--- 147

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF-SIAFSFLDMLESEGHAPDLVFHNV 330
           +  G    K       P +  Y +++    +  +   +   +L++L ++  +P++   N 
Sbjct: 148 NADGEFKFK-------PTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQ-ISPNIYTFNA 199

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-------FSLLPKLV 383
           +++   K+G+  +A      +++  L PD++T+ SL+   C +         F ++P+  
Sbjct: 200 MVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKG 259

Query: 384 CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
           C    + + V Y  L+   C+AG  N+A+KL+  M +    P   ++  L+  L G+ + 
Sbjct: 260 C----QRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRK 315

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
            EA+N++  +       N H +T ++D L +  +  +A ++      +     VV+Y   
Sbjct: 316 VEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNAL 375

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           I G  + G  ++A+ +   M+  +  PN  TY  ++   CK+R +     LL  +++ ++
Sbjct: 376 IDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKL 435

Query: 564 ELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMW 604
                T   L     K +   SA   L  M   GL+PD+ W
Sbjct: 436 SPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQ-W 475


>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
          Length = 948

 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 127/516 (24%), Positives = 231/516 (44%), Gaps = 60/516 (11%)

Query: 136 GMVLEAFDEMGR-FGFTPNTFARNIVMDVLFKIGRVDLGIKVL--------KETQLPNFL 186
           G  L   D++ R FG  P+  + N+V+ VL    R D     L        ++   P   
Sbjct: 120 GRALHLLDQLPRRFGVQPSFRSYNVVLSVL---ARADCHADALALYRRMVHRDRVPPTTF 176

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           +F +A   LC+L   +    ++  M R G  P+  +++ +++  C  G + EA  LL  M
Sbjct: 177 TFGVAARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEM 236

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
           + +G +  VN +  ++ G   L R+  A  L ++M+  GC P V+TY  L++G    +  
Sbjct: 237 LLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQA 296

Query: 307 SIAFSFLDMLESEGHAPDL---VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
             A + L      G  P+L   +F+ V+  CL++ G   +A ++Y+ +      PD++T+
Sbjct: 297 DEARAML------GRVPELNVVLFNTVIGGCLAE-GKLAEATELYETMGLKGCQPDAHTY 349

Query: 364 CSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
             L+  +C  GR S   +L+  +E +    ++V Y  +L  FCK G  +    L   M  
Sbjct: 350 SILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSA 409

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN--NPAV------------------ 460
           KG T ++  + G++  LC   ++DEA+ + Q +     NP +                  
Sbjct: 410 KGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEE 469

Query: 461 ---------------NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
                          N   +  I+  L+  GR   A++L +  I+    LDVVSY   I+
Sbjct: 470 AEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIK 529

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
            + + G  + + +L  +M    + PN  +Y +++   CKER ++    L + +++  +  
Sbjct: 530 AMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAP 589

Query: 566 DYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           D  T   L   + K     +A+N L ++ N  + PD
Sbjct: 590 DIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPD 625



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 113/521 (21%), Positives = 228/521 (43%), Gaps = 36/521 (6%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA---FDEMGRFGFTPNT 154
           GR      ++  +AR GCV  A  +   +         G V EA    +EM   G   + 
Sbjct: 189 GRANEALALLRGMARHGCVPDAVLYQTVIHALCD---QGGVTEAATLLNEMLLMGCAADV 245

Query: 155 FARNIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGM 210
              + V+  +  +GRV     L  +++ +  +P  +++   L  LC++      + ++G 
Sbjct: 246 NTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGR 305

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           +       NV +F  ++      G++AEA +L   M   G     + +++L+ G  +L R
Sbjct: 306 VPEL----NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGR 361

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           +  A  L  +M + G +PNVVTYT ++  F +  M+    + L+ + ++G   +   +N 
Sbjct: 362 ISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNG 421

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE- 389
           +I  L K G  D+A+ +   +      PD  ++ +++  +C + +      +   L  E 
Sbjct: 422 MIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEG 481

Query: 390 --ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
             A+ + YN ++    + G    AV+L   M+  G + D  S+ GL++ +C    +D ++
Sbjct: 482 VVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSL 541

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            + + +       N   +  ++  L +  R   A++L ++ + +    D+V+Y   I GL
Sbjct: 542 VLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGL 601

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER---------NIKMV------- 551
            + G    A  L  ++ +  V P+  TY +++   CK R         N  M        
Sbjct: 602 CKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVCPVGD 661

Query: 552 KRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVE 592
           +R++Q + D   +L  HT      +++   ++    N L+E
Sbjct: 662 RRIMQILPDKNFKLYLHTK---DSYLYCSRANECKANILLE 699


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 193/385 (50%), Gaps = 13/385 (3%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+  ++   +  LC  N +   +  +  M  +   PNV  + +L++  CK GR+ EA  L
Sbjct: 44  PDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVAL 103

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           L  M       +V  +  LI G  +  R   A  L E+MV +GC P++ TYT+LI GF +
Sbjct: 104 LSKMRKKCVPTAV-TYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCK 162

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL-KLVPDSY 361
           +K    A    + L + G  PD+V ++ LID L K G   +A+D++  +++    +P++ 
Sbjct: 163 SKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTV 222

Query: 362 TFCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
           T+ SL+S  C  G+     +LL ++        D+V Y  L++ FCK    + A  L N 
Sbjct: 223 TYNSLISGFCRMGKMDEAMNLLERMA-ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQ 281

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           M  KG TPD  +F  L+ GLC   ++ +A+++   +   + +   + +  I+D    A +
Sbjct: 282 MTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQ 341

Query: 478 CHKAIQLFRRAIVEKY--PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
             +A    R+ ++E+   P +VVS+ + IRGL +  R+ EA  L  + +     P+   Y
Sbjct: 342 LEEA----RKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMY 397

Query: 536 RVMLLSFCKERNIKMVKRLLQDVID 560
             ++   C+E+ +    R+ + +++
Sbjct: 398 TTVIDGLCREKKVDEACRVYRKMLE 422



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 117/429 (27%), Positives = 207/429 (48%), Gaps = 20/429 (4%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ---LPNFLSFNIALCNLCKL 198
            +EM     TPN     +++D L K GRVD  + +L + +   +P  +++N  +  LCK 
Sbjct: 69  LEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISGLCKA 128

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
              S   D++  MV  G  P++  +  L+  FCK  +  +A ++   ++  G    V  +
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNG-CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           + LIDG  +  RL  A  L+ +M+++G C PN VTY SLI GF        A + L+ + 
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G +PD+V +  L++   K+   DDA D+ + +    L PD  TF SL+  +C   R S
Sbjct: 249 ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLS 308

Query: 378 LLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN-YSFVGL 433
               ++  +  ++    +  YN +L  +C+A    +A K    ML++   P N  SF  +
Sbjct: 309 DAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKF---MLEEMDCPPNVVSFNIM 365

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           +RGLC   +  EA+ + +         +  ++T ++D L    +  +A +++R+ + E  
Sbjct: 366 IRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPG 425

Query: 494 PL-DVVSYTVAIRGLLEGGRTEEA--YILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
            L + ++Y+  I GL   G  + A  YI           PN  TY +++ +F K    + 
Sbjct: 426 CLPNSITYSTLITGLCNAGMLDRARGYI------EKGCVPNIGTYNLLIDAFRKANRDED 479

Query: 551 VKRLLQDVI 559
            + LL D++
Sbjct: 480 ARELLDDMV 488



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 154/297 (51%), Gaps = 7/297 (2%)

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
            +T LI G  +++RL+ A     KMV  G  P+V TYT++I           A  FL+ +
Sbjct: 13  TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR- 375
            +    P++V + VLID L K G  D+A+ +   + + K VP + T+ SL+S +C + R 
Sbjct: 73  ANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGLCKAERA 131

Query: 376 ---FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
              + LL ++V    +  D+  Y  L++ FCK+   + A++++  ++ +GF PD  ++  
Sbjct: 132 SEAYDLLEEMVYSGCI-PDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSC 190

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAV-NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
           L+ GLC   ++ EAI+++  ++ +   + N   + +++      G+  +A+ L  R    
Sbjct: 191 LIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAET 250

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
               DVV+YT  + G  +  R ++AY L +QM    + P+  T+  ++   C+E  +
Sbjct: 251 GSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRL 307



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 101/447 (22%), Positives = 199/447 (44%), Gaps = 48/447 (10%)

Query: 48  LAPHIVHSTLLN---CPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVR 104
           L P++V  T+L    C    +  +  +    ++       +++ +IS + +   R     
Sbjct: 77  LTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISGLCK-AERASEAY 135

Query: 105 GIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVL 164
            ++ E+   GC+    T+   +  + + +     L  F+++   GF P+    + ++D L
Sbjct: 136 DLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGL 195

Query: 165 FKIGR----VDLGIKVLKE-TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN 219
            K GR    +DL  +++K  + +PN +++N  +   C++  +    +++  M   G  P+
Sbjct: 196 CKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPD 255

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
           V  +  L+N FCK+ R+ +AY LL  M   G +  V  +T L+DG  R  RL  A ++  
Sbjct: 256 VVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILG 315

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
           +M +  CSP V TY +++ G+  A     A  F  MLE     P++V  N++I  L K+ 
Sbjct: 316 EMRRKSCSPTVYTYNTILDGYCRANQLEEARKF--MLEEMDCPPNVVSFNIMIRGLCKVN 373

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALL 399
              +A+++ +     +  P                                D+V+Y  ++
Sbjct: 374 RSSEAMELVEEARRRRCNP--------------------------------DVVMYTTVI 401

Query: 400 SYFCKAGFPNQAVKLYNTMLDK-GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
              C+    ++A ++Y  ML++ G  P++ ++  L+ GLC A  +D A    +G +    
Sbjct: 402 DGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRA----RGYIEKGC 457

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLF 485
             N   +  ++D   +A R   A +L 
Sbjct: 458 VPNIGTYNLLIDAFRKANRDEDARELL 484



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 145/313 (46%), Gaps = 3/313 (0%)

Query: 284 NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
           N CS + VTYTSLI+G  + K    A  FL  + S+G  PD+  +  +I  L       +
Sbjct: 5   NSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHE 64

Query: 344 ALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA--DLVVYNALLSY 401
           A    + +    L P+  T+  L+  +C  GR      L+  +  +     V YN+L+S 
Sbjct: 65  ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISG 124

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVN 461
            CKA   ++A  L   M+  G  PD +++  L+ G C ++K D+A+ V++ +V      +
Sbjct: 125 LCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPD 184

Query: 462 AHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL-DVVSYTVAIRGLLEGGRTEEAYILY 520
              ++ ++D L + GR  +AI LF R I     + + V+Y   I G    G+ +EA  L 
Sbjct: 185 VVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLL 244

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKF 580
            +M      P+  TY  ++  FCK   +     LL  +    +  D  T   L   + + 
Sbjct: 245 ERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRE 304

Query: 581 HSSSSAVNQLVEM 593
           +  S AV+ L EM
Sbjct: 305 NRLSDAVHILGEM 317



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/293 (23%), Positives = 135/293 (46%), Gaps = 12/293 (4%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
           A+  F    K      +  +++ +IS   R+ G+ +    ++  +A  G      T+   
Sbjct: 204 AIDLFGRMIKSGSCMPNTVTYNSLISGFCRM-GKMDEAMNLLERMAETGSSPDVVTYTTL 262

Query: 126 LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL--- 182
           +  + +        +  ++M R G TP+      +MD L +  R+   + +L E +    
Sbjct: 263 MNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSC 322

Query: 183 -PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
            P   ++N  L   C+ N +   +    M+      PNV  F I++   CK+ R +EA +
Sbjct: 323 SPTVYTYNTILDGYCRANQLEEARKF--MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAME 380

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN-GCSPNVVTYTSLIKGF 300
           L+        +  V  +T +IDG  R +++D A  ++ KM++  GC PN +TY++LI G 
Sbjct: 381 LVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGL 440

Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE 353
             A M   A  +++    +G  P++  +N+LID   K    +DA ++ D +++
Sbjct: 441 CNAGMLDRARGYIE----KGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQ 489



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 107/243 (44%), Gaps = 10/243 (4%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV ++  +++   +L  R +    ++ ++ R G      TF   +    R       +  
Sbjct: 255 DVVTYTTLMNGFCKL-ARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHI 313

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ--LPNFLSFNIALCNLCKLN 199
             EM R   +P  +  N ++D   +  +++   K + E     PN +SFNI +  LCK+N
Sbjct: 314 LGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVN 373

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN-AW 258
             S   +++    R+   P+V M+  +++  C+  ++ EA ++   M+     L  +  +
Sbjct: 374 RSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITY 433

Query: 259 TVLIDGFRRLRRLDMA-GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           + LI G      LD A GY     ++ GC PN+ TY  LI  F +A     A   LD + 
Sbjct: 434 STLITGLCNAGMLDRARGY-----IEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMV 488

Query: 318 SEG 320
             G
Sbjct: 489 QRG 491


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 193/385 (50%), Gaps = 13/385 (3%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+  ++   +  LC  N +   +  +  M  +   PNV  + +L++  CK GR+ EA  L
Sbjct: 44  PDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVAL 103

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           L  M       +V  +  LI G  +  R   A  L E+MV +GC P++ TYT+LI GF +
Sbjct: 104 LSKMRKKCVPTAV-TYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCK 162

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL-KLVPDSY 361
           +K    A    + L + G  PD+V ++ LID L K G   +A+D++  +++    +P++ 
Sbjct: 163 SKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTV 222

Query: 362 TFCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
           T+ SL+S  C  G+     +LL ++        D+V Y  L++ FCK    + A  L N 
Sbjct: 223 TYNSLISGFCRMGKMDEAMNLLERMA-ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQ 281

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           M  KG TPD  +F  L+ GLC   ++ +A+++   +   + +   + +  I+D    A +
Sbjct: 282 MTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQ 341

Query: 478 CHKAIQLFRRAIVEKY--PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
             +A    R+ ++E+   P +VVS+ + IRGL +  R+ EA  L  + +     P+   Y
Sbjct: 342 LEEA----RKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMY 397

Query: 536 RVMLLSFCKERNIKMVKRLLQDVID 560
             ++   C+E+ +    R+ + +++
Sbjct: 398 TTVIDGLCREKKVDEACRVYRKMLE 422



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/429 (27%), Positives = 207/429 (48%), Gaps = 20/429 (4%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ---LPNFLSFNIALCNLCKL 198
            +EM     TPN     +++D L K GRVD  + +L + +   +P  +++N  +  LCK 
Sbjct: 69  LEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISGLCKA 128

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
              S   D++  MV  G  P++  +  L+  FCK  +  +A ++   ++  G    V  +
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNG-CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           + LIDG  +  RL  A  L+ +M+++G C PN VTY SLI GF        A + L+ + 
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G +PD+V +  L++   K+   DDA D+ + +    L PD  TF SL+  +C   R S
Sbjct: 249 ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLS 308

Query: 378 LLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN-YSFVGL 433
               ++  +  ++    +  YN +L  +C+A    +A K    ML++   P N  SF  +
Sbjct: 309 DAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKF---MLEEMDCPPNVVSFNIM 365

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           +RGLC   +  EA+ + +         +  ++T ++D L    +  +A +++R+ + E  
Sbjct: 366 IRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPG 425

Query: 494 PL-DVVSYTVAIRGLLEGGRTEEA--YILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
            L + ++Y+  + GL   G  + A  YI           PN  TY +++ +F K    + 
Sbjct: 426 CLPNSITYSTLVTGLCNAGMLDRARGYI------EKGCVPNIGTYNLLIDAFRKANRDED 479

Query: 551 VKRLLQDVI 559
            + LL D++
Sbjct: 480 ARELLDDMV 488



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 154/297 (51%), Gaps = 7/297 (2%)

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
            +T LI G  +++RL+ A     KMV  G  P+V TYT++I           A  FL+ +
Sbjct: 13  TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR- 375
            +    P++V + VLID L K G  D+A+ +   + + K VP + T+ SL+S +C + R 
Sbjct: 73  ANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGLCKAERA 131

Query: 376 ---FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
              + LL ++V    +  D+  Y  L++ FCK+   + A++++  ++ +GF PD  ++  
Sbjct: 132 SEAYDLLEEMVYSGCI-PDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSC 190

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAV-NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
           L+ GLC   ++ EAI+++  ++ +   + N   + +++      G+  +A+ L  R    
Sbjct: 191 LIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAET 250

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
               DVV+YT  + G  +  R ++AY L +QM    + P+  T+  ++   C+E  +
Sbjct: 251 GSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRL 307



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 101/447 (22%), Positives = 199/447 (44%), Gaps = 48/447 (10%)

Query: 48  LAPHIVHSTLLN---CPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVR 104
           L P++V  T+L    C    +  +  +    ++       +++ +IS + +   R     
Sbjct: 77  LTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISGLCK-AERASEAY 135

Query: 105 GIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVL 164
            ++ E+   GC+    T+   +  + + +     L  F+++   GF P+    + ++D L
Sbjct: 136 DLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGL 195

Query: 165 FKIGR----VDLGIKVLKE-TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN 219
            K GR    +DL  +++K  + +PN +++N  +   C++  +    +++  M   G  P+
Sbjct: 196 CKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPD 255

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
           V  +  L+N FCK+ R+ +AY LL  M   G +  V  +T L+DG  R  RL  A ++  
Sbjct: 256 VVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILG 315

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
           +M +  CSP V TY +++ G+  A     A  F  MLE     P++V  N++I  L K+ 
Sbjct: 316 EMRRKSCSPTVYTYNTILDGYCRANQLEEARKF--MLEEMDCPPNVVSFNIMIRGLCKVN 373

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALL 399
              +A+++ +     +  P                                D+V+Y  ++
Sbjct: 374 RSSEAMELVEEARRRRCNP--------------------------------DVVMYTTVI 401

Query: 400 SYFCKAGFPNQAVKLYNTMLDK-GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
              C+    ++A ++Y  ML++ G  P++ ++  L+ GLC A  +D A    +G +    
Sbjct: 402 DGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRA----RGYIEKGC 457

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLF 485
             N   +  ++D   +A R   A +L 
Sbjct: 458 VPNIGTYNLLIDAFRKANRDEDARELL 484



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 145/313 (46%), Gaps = 3/313 (0%)

Query: 284 NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
           N CS + VTYTSLI+G  + K    A  FL  + S+G  PD+  +  +I  L       +
Sbjct: 5   NSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHE 64

Query: 344 ALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA--DLVVYNALLSY 401
           A    + +    L P+  T+  L+  +C  GR      L+  +  +     V YN+L+S 
Sbjct: 65  ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISG 124

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVN 461
            CKA   ++A  L   M+  G  PD +++  L+ G C ++K D+A+ V++ +V      +
Sbjct: 125 LCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPD 184

Query: 462 AHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL-DVVSYTVAIRGLLEGGRTEEAYILY 520
              ++ ++D L + GR  +AI LF R I     + + V+Y   I G    G+ +EA  L 
Sbjct: 185 VVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLL 244

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKF 580
            +M      P+  TY  ++  FCK   +     LL  +    +  D  T   L   + + 
Sbjct: 245 ERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRE 304

Query: 581 HSSSSAVNQLVEM 593
           +  S AV+ L EM
Sbjct: 305 NRLSDAVHILGEM 317



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/293 (23%), Positives = 135/293 (46%), Gaps = 12/293 (4%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
           A+  F    K      +  +++ +IS   R+ G+ +    ++  +A  G      T+   
Sbjct: 204 AIDLFGRMIKSGSCMPNTVTYNSLISGFCRM-GKMDEAMNLLERMAETGSSPDVVTYTTL 262

Query: 126 LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL--- 182
           +  + +        +  ++M R G TP+      +MD L +  R+   + +L E +    
Sbjct: 263 MNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSC 322

Query: 183 -PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
            P   ++N  L   C+ N +   +    M+      PNV  F I++   CK+ R +EA +
Sbjct: 323 SPTVYTYNTILDGYCRANQLEEARKF--MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAME 380

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN-GCSPNVVTYTSLIKGF 300
           L+        +  V  +T +IDG  R +++D A  ++ KM++  GC PN +TY++L+ G 
Sbjct: 381 LVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGL 440

Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE 353
             A M   A  +++    +G  P++  +N+LID   K    +DA ++ D +++
Sbjct: 441 CNAGMLDRARGYIE----KGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQ 489



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 107/243 (44%), Gaps = 10/243 (4%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV ++  +++   +L  R +    ++ ++ R G      TF   +    R       +  
Sbjct: 255 DVVTYTTLMNGFCKL-ARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHI 313

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ--LPNFLSFNIALCNLCKLN 199
             EM R   +P  +  N ++D   +  +++   K + E     PN +SFNI +  LCK+N
Sbjct: 314 LGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVN 373

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN-AW 258
             S   +++    R+   P+V M+  +++  C+  ++ EA ++   M+     L  +  +
Sbjct: 374 RSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITY 433

Query: 259 TVLIDGFRRLRRLDMA-GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           + L+ G      LD A GY     ++ GC PN+ TY  LI  F +A     A   LD + 
Sbjct: 434 STLVTGLCNAGMLDRARGY-----IEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMV 488

Query: 318 SEG 320
             G
Sbjct: 489 QRG 491


>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 123/475 (25%), Positives = 220/475 (46%), Gaps = 31/475 (6%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVM------DVLFKI 167
           GC    + F   +  Y R   Y    +   +MG  G  P     NI++      + L  +
Sbjct: 364 GCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSL 423

Query: 168 GRVDLGIKVLKE-----TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
             ++L  K   E       L      N+A C LC          +I  M+ KGF P+   
Sbjct: 424 DVLELAEKAYGEMLDAHVVLNKVNVSNLARC-LCGAGKFEKAYSIIREMMSKGFIPDTST 482

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           +  ++   C   ++  A+ L   M +      V  +T+LID F ++  L  A   +++MV
Sbjct: 483 YSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMV 542

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
           ++GC+PNVVTYT+LI  +++A+  S A    +M+ SEG  P++V +  LID   K G  +
Sbjct: 543 RDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIE 602

Query: 343 DALDVYDGLLELKLVPDS----------------YTFCSLLSTVCLSGRFSLLPKLVCGL 386
            A  +Y  +     +PD                 +T+ +L+  +C + +      L+  +
Sbjct: 603 KACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVM 662

Query: 387 EVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
            VE    + +VY+AL+  FCK G  ++A  ++  M ++G+ P+ Y++  L+  L   +++
Sbjct: 663 SVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRL 722

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           D A+ V   ++ N+ A N  ++T ++D L + G+  +A +L      +    +VV+YT  
Sbjct: 723 DLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAM 782

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           I G  + G+ ++   L  QM      PN  TYRV++   C    +    +LL ++
Sbjct: 783 IDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEM 837



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/404 (24%), Positives = 188/404 (46%), Gaps = 25/404 (6%)

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
           +PN +++ I LC   +   +   K ++ MM+ +G YP+ R+F  L++ +C+ G  + AY+
Sbjct: 331 IPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYK 390

Query: 242 LLGLMITLGTSLSVNAWTVLIDG------FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
           LL  M   G       + +LI G         L  L++A   + +M+      N V  ++
Sbjct: 391 LLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSN 450

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           L +    A  F  A+S +  + S+G  PD   ++ +I  L      D+A  +++ +    
Sbjct: 451 LARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNH 510

Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAV 412
           +VPD +T+  L+ + C  G      K    +  +    ++V Y AL+  + KA   + A 
Sbjct: 511 VVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSAN 570

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN--PAV---------- 460
           +L+  ML +G  P+  ++  L+ G C + +I++A  +Y  +  N   P V          
Sbjct: 571 ELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGN 630

Query: 461 ----NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
               N   + A+VD L +A +  +A  L     VE    + + Y   I G  + G+ +EA
Sbjct: 631 IRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEA 690

Query: 517 YILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
            +++++M      PN YTY  ++    K++ + +  ++L  +++
Sbjct: 691 QMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLE 734



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 102/445 (22%), Positives = 185/445 (41%), Gaps = 58/445 (13%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G  +  R    E+ R GC     T+   +  Y +        E F+ M   G  PN    
Sbjct: 529 GLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTY 588

Query: 158 NIVMDVLFKIGRVDLGIKVLKE--------------------TQLPNFLSFNIALCNLCK 197
             ++D   K G+++   ++                        + PN  ++   +  LCK
Sbjct: 589 TALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCK 648

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            + V   +D++ +M  +G  PN  +++ L++ FCK+G++ EA  +   M   G   +V  
Sbjct: 649 AHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYT 708

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           ++ LID   + +RLD+A  +  +M++N C+PNV+ YT +I G  +      A+  + M+E
Sbjct: 709 YSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMME 768

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG--- 374
            +G  P++V +  +ID   K G  D  L++   +      P+  T+  L++  C +G   
Sbjct: 769 EKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLD 828

Query: 375 ---------RFSLLPKLVCGL-------------------EVEADLVV-----YNALLSY 401
                    + +  PK + G                    E+  ++ V     Y  L+  
Sbjct: 829 DAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDS 888

Query: 402 FCKAGFPNQAVKLYNTM--LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
           FCKAG    A++L+  M         D   +  L+  L  A K+D+A  +Y  ++     
Sbjct: 889 FCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGI 948

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQL 484
               +   +V  LI   R  +A+QL
Sbjct: 949 PELSIFFYLVKGLIRINRWEEALQL 973



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 111/518 (21%), Positives = 215/518 (41%), Gaps = 27/518 (5%)

Query: 65  IALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLL 124
           + + FFIW  +Q  Y H    + H +  V    G        + E+      I  +   +
Sbjct: 144 LGVKFFIWAGRQIGYGHTGPVY-HALLEVLGCGGNDRVPEQFLREIRDEDKEILGKLLNV 202

Query: 125 FLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPN 184
            +R   R  ++ + LE    +   G+ P+    N ++ V  +  R+D    V +E     
Sbjct: 203 LIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSG 262

Query: 185 FLSFNIAL-CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
           F      L C +  L      ++ + ++ ++ F  +  ++  +++  C+     EA   L
Sbjct: 263 FNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFL 322

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
             M +     +V  + +L+ G  R R+L     +   M+  GC P+   + SLI  +  +
Sbjct: 323 SRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRS 382

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL---SKMGSYDD---ALDVYDGLLELKLV 357
             +S A+  L  +   G  P  V +N+LI  +    K+ S D    A   Y  +L+  +V
Sbjct: 383 GDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVV 442

Query: 358 PDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKL 414
            +     +L   +C +G+F     ++  +  +    D   Y+ ++   C A   + A  L
Sbjct: 443 LNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLL 502

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
           +  M      PD +++  L+   C    + +A   +  +V +  A N   +TA++   ++
Sbjct: 503 FEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLK 562

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIA-VP---- 529
           A +   A +LF   + E    +VV+YT  I G  + G+ E+A  +Y++M+  A +P    
Sbjct: 563 ARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDM 622

Query: 530 -----------PNAYTYRVMLLSFCKERNIKMVKRLLQ 556
                      PN +TY  ++   CK   +K  + LL 
Sbjct: 623 YFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLD 660



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 93/392 (23%), Positives = 173/392 (44%), Gaps = 16/392 (4%)

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
           ++  +L+   C+ G    A + LG +  LG   S   +  L+  F    RLD A  +  +
Sbjct: 198 KLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHRE 257

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           M  +G + +  T    +    +A  +  A   L ++E E    D V +  +I  L +   
Sbjct: 258 MSDSGFNMDGYTLGCFVHLLCKAGRWREA---LALIEKEEFKLDTVIYTQMISGLCEASL 314

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS----GRFSLLPKLVCGLEVEADLVVYN 396
           +++A+D    +     +P+  T+  LL   CL     GR   +  ++          ++N
Sbjct: 315 FEEAMDFLSRMRSSSCIPNVVTYRILLCG-CLRKRQLGRCKRILSMMITEGCYPSRRIFN 373

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID-----EAINVYQ 451
           +L+  +C++G  + A KL   M D G  P    +  L+ G+CG  K+      E      
Sbjct: 374 SLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAY 433

Query: 452 GIVMNNPAVNAHVHTAIVDR-LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
           G +++   V   V+ + + R L  AG+  KA  + R  + + +  D  +Y+  I  L   
Sbjct: 434 GEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNA 493

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
            + + A++L+ +MK   V P+ +TY +++ SFCK   ++  ++   +++      +  T 
Sbjct: 494 SKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTY 553

Query: 571 IRLTKFIFKFHSSSSAVNQLVE-MCNLGLIPD 601
             L     K    SSA N+L E M + G IP+
Sbjct: 554 TALIHAYLKARKMSSA-NELFEMMLSEGCIPN 584



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/298 (22%), Positives = 119/298 (39%), Gaps = 78/298 (26%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCK 197
           F +M   G+ PN +  + ++D LFK  R+DL +KVL    + +  PN + +   +  LCK
Sbjct: 694 FTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCK 753

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMF---------------------------------- 223
           +        ++ MM  KG +PNV  +                                  
Sbjct: 754 VGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVT 813

Query: 224 -EILLNCFCKMGRIAEAYQLL------------------------------GLMITLGTS 252
             +L+N  C  G + +A+QLL                              GL+  +  +
Sbjct: 814 YRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAEN 873

Query: 253 LSVN---AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVT----YTSLIKGFMEAKM 305
           ++V    A+ +LID F +  RL++A  L ++M  + C+         Y+SLI+    A  
Sbjct: 874 VAVPIIPAYRILIDSFCKAGRLELALELHKEM--SSCTSYSAADKDLYSSLIESLSLASK 931

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
              AF     +   G  P+L     L+  L ++  +++AL + D + ++  V +S + 
Sbjct: 932 VDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQLSDCICQMVHVSNSSSL 989



 Score = 44.7 bits (104), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 46/227 (20%), Positives = 94/227 (41%), Gaps = 16/227 (7%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G+ +    ++  +   GC     T+   +  + +       LE   +MG  G  PN    
Sbjct: 755 GKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTY 814

Query: 158 NIVMDVLFKIGRVDLGIKVL---KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
            ++++     G +D   ++L   K+T  P  ++         K+ +  N + +I + +  
Sbjct: 815 RVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMA------GYRKVIEGFNREFIISLGLLD 868

Query: 215 GFYPNVRM-----FEILLNCFCKMGRIAEAYQLLGLM--ITLGTSLSVNAWTVLIDGFRR 267
               NV +     + IL++ FCK GR+  A +L   M   T  ++   + ++ LI+    
Sbjct: 869 EIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSL 928

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
             ++D A  L+  M++ G  P +  +  L+KG +    +  A    D
Sbjct: 929 ASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQLSD 975


>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 669

 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 113/474 (23%), Positives = 214/474 (45%), Gaps = 12/474 (2%)

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNI 190
           YG +  A   +      P+ +    ++  L   GRV   + +L +       P+ +++ +
Sbjct: 122 YGRLDAARRLIASMPVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTV 181

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            L  +CK +      +V+  M  KG  PN+  + +++N  C+ GR+ +A ++L  + + G
Sbjct: 182 LLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYG 241

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
               + ++T ++ G    RR D    L+ +MV   C PN VT+  L++ F    M   A 
Sbjct: 242 FQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAI 301

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
             L  +   G  P+    N++I+ + K G  DDA D  + +      PD+ ++ ++L  +
Sbjct: 302 QVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGL 361

Query: 371 CLSGRFS----LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
           C +GR+     LLP++V       + V +N  +   C+ G   QA+KL   M + G +  
Sbjct: 362 CRAGRWEHAKELLPEMV-RKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVG 420

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
             ++  L+ G C   ++D A+ ++  +       N   +T ++  L  A R   A +L  
Sbjct: 421 IVTYNALVHGFCVQGRVDSALELFNNLPCEP---NTITYTTLLTGLCHAERLDAAAELLA 477

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
             I +  PL+ V++ V +    + G  EEA  L +QM      PN  T+  +L    K+ 
Sbjct: 478 GMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDC 537

Query: 547 NIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           N +    LL  ++   + LD  T   +   + +   +  A+  L  + ++G+ P
Sbjct: 538 NSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRP 591



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 115/503 (22%), Positives = 223/503 (44%), Gaps = 45/503 (8%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR      ++ ++ + GC     T+ + L    +   +G  +   DEM   G TPN    
Sbjct: 155 GRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTY 214

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N++++ + + GRVD   ++L         P+ +S+   L  LC      +VK +   MV 
Sbjct: 215 NVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVD 274

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           K   PN   F++L+  FC+ G +  A Q+L  M   G + +     ++I+   +  R+D 
Sbjct: 275 KKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDD 334

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEA------------------------------ 303
           A      M   GC+P+ ++YT++++G   A                              
Sbjct: 335 AYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFIC 394

Query: 304 -----KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP 358
                 +   A   ++++   G +  +V +N L+      G  D AL++++    L   P
Sbjct: 395 ILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNN---LPCEP 451

Query: 359 DSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLY 415
           ++ T+ +LL+ +C + R     +L+ G+   +   + V +N L+S+FC+ GF  +A++L 
Sbjct: 452 NTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELV 511

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
           N M++ G TP+  +F  LL G+      +EA+ +  G+V    +++   ++++VD L   
Sbjct: 512 NQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSRE 571

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
            R  +AIQ+            V  Y   +  L +   T++A   ++ M      PN  TY
Sbjct: 572 DRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTY 631

Query: 536 RVMLLSFCKERNIKMVKRLLQDV 558
            +++     E  +K  + +L ++
Sbjct: 632 IILIEGLAHEGLLKEARYVLSEL 654



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 107/424 (25%), Positives = 197/424 (46%), Gaps = 19/424 (4%)

Query: 89  MISVVTRLTG-----RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFD 143
           ++S  T L G     R++ V+ +  E+    CV    TF + +R + RG M    ++   
Sbjct: 246 IVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQ 305

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLN 199
           +M + G TPNT   NIV++ + K GRVD     L    +    P+ +S+   L  LC+  
Sbjct: 306 QMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAG 365

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
              + K+++  MVRK   PN   F   +   C+ G I +A +L+ LM   G S+ +  + 
Sbjct: 366 RWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYN 425

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
            L+ GF    R+D A  L+  +    C PN +TYT+L+ G   A+    A   L  +  +
Sbjct: 426 ALVHGFCVQGRVDSALELFNNL---PCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQK 482

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
               + V  NVL+    + G  ++A+++ + ++E    P+  TF +LL  +         
Sbjct: 483 DCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEA 542

Query: 380 PKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
            +L+ GL    V  D + Y++++    +     +A+++ + + D G  P    +  +L  
Sbjct: 543 LELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFA 602

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA----IQLFRRAIVEK 492
           LC   + D+AI+ +  +V N    N   +  +++ L   G   +A     +L+ + ++ K
Sbjct: 603 LCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGVLSK 662

Query: 493 YPLD 496
             L+
Sbjct: 663 SLLE 666



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/361 (24%), Positives = 163/361 (45%), Gaps = 6/361 (1%)

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
           +D++    ++     +G  P+V +   L+   C+ GR ++A ++L      G  + V A+
Sbjct: 53  DDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAY 112

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
             L+ G+ R  RLD A  L   M      P+  TYT +I+G  +      A + LD +  
Sbjct: 113 NTLVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQ 169

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL 378
            G  P +V + VL++ + K   + +A++V D +      P+  T+  +++ +C  GR   
Sbjct: 170 RGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDD 229

Query: 379 LPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
             +++  L     + D+V Y  +L   C A   +    L+  M+DK   P+  +F  L+R
Sbjct: 230 AKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVR 289

Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
             C    ++ AI V Q +  +    N  +   +++ + + GR   A        +     
Sbjct: 290 FFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNP 349

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
           D +SYT  +RGL   GR E A  L  +M     PPN  T+   +   C++  I+   +L+
Sbjct: 350 DTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLI 409

Query: 556 Q 556
           +
Sbjct: 410 E 410



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 105/454 (23%), Positives = 188/454 (41%), Gaps = 16/454 (3%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP----NFLSFNIALCNLCKLNDVSNV 204
           G  P+ +    ++  L + GR     +VL+  +      +  ++N  +   C+   +   
Sbjct: 69  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAA 128

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
           + +I  M      P+   +  ++   C  GR+ +A  LL  M+  G   SV  +TVL++ 
Sbjct: 129 RRLIASM---PVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEA 185

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
             +      A  + ++M   GC+PN+VTY  +I G         A   L+ L S G  PD
Sbjct: 186 VCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPD 245

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVC 384
           +V +  ++  L     +DD   ++  +++ K VP+  TF  L+   C  G      +++ 
Sbjct: 246 IVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQ 305

Query: 385 GLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
            +       +  + N +++  CK G  + A    N M   G  PD  S+  +LRGLC A 
Sbjct: 306 QMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAG 365

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYT 501
           + + A  +   +V  N   N       +  L + G   +AI+L          + +V+Y 
Sbjct: 366 RWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYN 425

Query: 502 VAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
             + G    GR + A  L++   ++   PN  TY  +L   C    +     LL  +I  
Sbjct: 426 ALVHGFCVQGRVDSALELFN---NLPCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQK 482

Query: 562 RIELDYHTSIRLTKFIFK---FHSSSSAVNQLVE 592
              L+  T   L  F  +      +   VNQ++E
Sbjct: 483 DCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMME 516



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 53/248 (21%), Positives = 112/248 (45%), Gaps = 6/248 (2%)

Query: 357 VPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVK 413
            PD Y    L+  +C  GR S   +++   E      D+  YN L++ +C+ G  + A +
Sbjct: 71  APDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARR 130

Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
           L  +M      PD Y++  ++RGLC   ++ +A+ +   ++      +   +T +++ + 
Sbjct: 131 LIASM---PVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVC 187

Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
           ++    +A+ +      +    ++V+Y V I G+   GR ++A  + +++      P+  
Sbjct: 188 KSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIV 247

Query: 534 TYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEM 593
           +Y  +L   C  R    VK L  +++D +   +  T   L +F  +      A+  L +M
Sbjct: 248 SYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQM 307

Query: 594 CNLGLIPD 601
              G  P+
Sbjct: 308 SQHGCTPN 315



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/301 (20%), Positives = 115/301 (38%), Gaps = 30/301 (9%)

Query: 48  LAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIV 107
           L P +V     NCP + +  + FI    Q+                    G  E    ++
Sbjct: 373 LLPEMVRK---NCPPNEVTFNTFICILCQK--------------------GLIEQAIKLI 409

Query: 108 GELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKI 167
             +   GC +   T+   +  +    + G V  A +        PNT     ++  L   
Sbjct: 410 ELMPEYGCSVGIVTYNALVHGFC---VQGRVDSALELFNNLPCEPNTITYTTLLTGLCHA 466

Query: 168 GRVDLGIKVLK---ETQLP-NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMF 223
            R+D   ++L    +   P N ++FN+ +   C+   V    +++  M+  G  PN+  F
Sbjct: 467 ERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITF 526

Query: 224 EILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQ 283
             LL+   K     EA +LL  +++ G SL    ++ ++D   R  R + A  +   +  
Sbjct: 527 NTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQD 586

Query: 284 NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
            G  P V  Y  ++    +      A  F   + S G  P+   + +LI+ L+  G   +
Sbjct: 587 MGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKE 646

Query: 344 A 344
           A
Sbjct: 647 A 647


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 112/436 (25%), Positives = 208/436 (47%), Gaps = 15/436 (3%)

Query: 151 TPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKD 206
           +P+  A  +V++ L +  R+D    VL+        P+++++N+ +  LCK   V +   
Sbjct: 38  SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 97

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
           ++  M  K   P    +  L++   K GR+ EA  +L  M+  G S ++  +TV+IDG  
Sbjct: 98  LLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLS 157

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA---- 322
           +  R++ A  ++  M+ NGC P+   YT+LI G  +      A  +L+ +   G A    
Sbjct: 158 KAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVE 217

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL 382
           PD+V HN++I  L   G+ +DAL  +D L +  L    +TF  L++ +C + R       
Sbjct: 218 PDVVIHNLVIRQLCASGNLEDALAYFDELDD-SLDLTHFTFNPLVAALCKAERTEEAIAF 276

Query: 383 VCGLEVE---ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
           V  +        L  Y +L+  F K G  ++A+      +++GF PD  ++  ++ GLC 
Sbjct: 277 VKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCK 336

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
             +++E    +  +       +A  + A++D  ++A    KA +++R+ +     +  V+
Sbjct: 337 LGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVT 396

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           Y + + GL + GR  EAY  +  M+         TY  ++  FC E N+     L + ++
Sbjct: 397 YNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRML 456

Query: 560 DARIE---LDYHTSIR 572
           D   E   + Y+  IR
Sbjct: 457 DRGCEPNLVSYNIIIR 472



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 105/408 (25%), Positives = 188/408 (46%), Gaps = 16/408 (3%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNV 204
           G  P+    N+V+  L   G ++  +    E      L +F +FN  +  LCK       
Sbjct: 215 GVEPDVVIHNLVIRQLCASGNLEDALAYFDELDDSLDLTHF-TFNPLVAALCKAERTEEA 273

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
              +  M  +  +P +  +  L++ F K+GR+ EA   L   +  G       +T +IDG
Sbjct: 274 IAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDG 333

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
             +L R++     + +M   G  P+ VTY +LI GFM+AKM   A      +   G    
Sbjct: 334 LCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVS 393

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL-- 382
            V +N+++D L K G   +A   +  + E   V    T+ +L+   C  G  S   +L  
Sbjct: 394 TVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFR 453

Query: 383 -VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
            +     E +LV YN ++   C+AG   +A   +  +L +   PD Y+F   L GLC  +
Sbjct: 454 RMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLC--Q 511

Query: 442 KID---EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
           ++D   + + +++ +V    + N H ++ ++D +  AG     +++F   +      DVV
Sbjct: 512 RLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVV 571

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML--LSFCK 544
            +   IR L   GR +EA  ++ +++  +  P+A++Y  +L  LS C+
Sbjct: 572 VFNTLIRWLCIAGRVDEALEVFRELERRSA-PDAWSYWSLLDALSRCE 618



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 98/382 (25%), Positives = 177/382 (46%), Gaps = 40/382 (10%)

Query: 219 NVRMFEILLNCFCKMG--------------------------------RIAEAYQLLGLM 246
           + R+   LLN  CK G                                R+ EA+ +L   
Sbjct: 8   DTRVCTALLNGLCKTGQLDRAMLLLDEMPCSPDMVAFTVVINGLCREKRLDEAFSVLERA 67

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
           +  G       + V IDG  +  R+D A  L +KM +  C P  VTYT+L+ G ++A   
Sbjct: 68  VRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRL 127

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
             A + L+ +  +G++P L  + V+ID LSK G  ++A  ++  +L     PD++ + +L
Sbjct: 128 DEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTAL 187

Query: 367 LSTVCLSGRFS----LLPKLV---CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
           +S +   G+       L ++V   C   VE D+V++N ++   C +G    A+  ++  L
Sbjct: 188 ISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDE-L 246

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
           D      +++F  L+  LC A + +EAI   + +           +T++VD  ++ GR  
Sbjct: 247 DDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLD 306

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
           +A+   + A+   +  D V+YT  I GL + GR EE    + +M++    P+A TY  ++
Sbjct: 307 EALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALI 366

Query: 540 LSFCKERNIKMVKRLLQDVIDA 561
             F K + I    R+ + ++ +
Sbjct: 367 DGFMKAKMIPKAHRVYRQMLQS 388



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 132/610 (21%), Positives = 235/610 (38%), Gaps = 103/610 (16%)

Query: 36  VCATTHQDFPIILAPHIVHSTLLNCPSDLIALSFFI--WCAKQRDYFHDVQSFDHMISVV 93
           +C T   D  ++L         + C  D++A +  I   C ++R         D   SV+
Sbjct: 19  LCKTGQLDRAMLLLDE------MPCSPDMVAFTVVINGLCREKR--------LDEAFSVL 64

Query: 94  TRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPN 153
            R                R GC     T+ +F+    + E      +   +M      P 
Sbjct: 65  ERAV--------------RAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPT 110

Query: 154 TFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           T     ++D L K GR+D  + +L++                               MV 
Sbjct: 111 TVTYTALVDGLLKAGRLDEAMAILEQ-------------------------------MVE 139

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           KG  P ++ + ++++   K GR+ EA ++   M+  G       +T LI G  ++ +LD 
Sbjct: 140 KGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDE 199

Query: 274 AGYLWEKMVQNGCS----PNVV----------------------------------TYTS 295
           A     +MV+NGC+    P+VV                                  T+  
Sbjct: 200 ALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDDSLDLTHFTFNP 259

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           L+    +A+    A +F+  +      P L  +  L+D   K+G  D+AL      +E  
Sbjct: 260 LVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERG 319

Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAV 412
            +PD+ T+ S++  +C  GR     +    +     E D V Y AL+  F KA    +A 
Sbjct: 320 FIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAH 379

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
           ++Y  ML  G      ++  +L GLC A ++ EA   +  +           ++A++D  
Sbjct: 380 RVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGF 439

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
              G    A++LFRR +      ++VSY + IRGL   G+  +AY  + ++    + P+ 
Sbjct: 440 CSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDV 499

Query: 533 YTYRVMLLSFCKERN-IKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLV 591
           YT+   L   C+  + +     L + ++      + H+   L   I +       +    
Sbjct: 500 YTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFH 559

Query: 592 EMCNLGLIPD 601
           EM + G+ PD
Sbjct: 560 EMVSRGVAPD 569



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 102/393 (25%), Positives = 175/393 (44%), Gaps = 36/393 (9%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDV 207
           P  F    ++D   K+GR+D  +  LKE      +P+ +++   +  LCKL  V    + 
Sbjct: 287 PTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCER 346

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
              M  +G+ P+   +  L++ F K   I +A+++   M+  GT +S   + +++DG  +
Sbjct: 347 FHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCK 406

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
             R+  A   +  M + GC   VVTY++L+ GF      S A      +   G  P+LV 
Sbjct: 407 AGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVS 466

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE 387
           +N++I  L + G    A   ++ LL+ +L PD YTF S L  +C              L+
Sbjct: 467 YNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQR------------LD 514

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
              D                    V+L+ +M+ +G +P+ +S+  L+ G+C A  ++  +
Sbjct: 515 TVGD-------------------GVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTL 555

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            ++  +V    A +  V   ++  L  AGR  +A+++FR       P D  SY   +  L
Sbjct: 556 EIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRSAP-DAWSYWSLLDAL 614

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
               R EEA +L   MK     P  Y   V  L
Sbjct: 615 SRCERMEEARLLSFHMKLQGCAPRHYDLTVRFL 647



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 160/375 (42%), Gaps = 25/375 (6%)

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
           T L++G  +  +LD A  L ++M    CSP++V +T +I G    K    AFS L+    
Sbjct: 13  TALLNGLCKTGQLDRAMLLLDEM---PCSPDMVAFTVVINGLCREKRLDEAFSVLERAVR 69

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF-- 376
            G  PD V +NV ID L K    DDA  +   + E K +P + T+ +L+  +  +GR   
Sbjct: 70  AGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDE 129

Query: 377 --SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
             ++L ++V        L  Y  ++    KAG   +A +++  ML  G  PD + +  L+
Sbjct: 130 AMAILEQMV-EKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALI 188

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAH----VHTAIVDRLIEAGRCHKAIQLFRRAIV 490
            GL    K+DEA+     +V N  A        +H  ++ +L  +G    A+  F   + 
Sbjct: 189 SGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDE-LD 247

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
           +   L   ++   +  L +  RTEEA     +M      P  +TY  ++  F K   +  
Sbjct: 248 DSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDE 307

Query: 551 VKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLL 610
               L++ ++     D  T   +   + K         +  EM N G  PD         
Sbjct: 308 ALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPD--------- 358

Query: 611 SDETMTPVSLFDGFV 625
               +T  +L DGF+
Sbjct: 359 ---AVTYAALIDGFM 370



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 7/215 (3%)

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           D  V  ALL+  CK G  ++A+ L + M     +PD  +F  ++ GLC  +++DEA +V 
Sbjct: 8   DTRVCTALLNGLCKTGQLDRAMLLLDEM---PCSPDMVAFTVVINGLCREKRLDEAFSVL 64

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
           +  V      +   +   +D L +A R   A QL ++   +K     V+YT  + GLL+ 
Sbjct: 65  ERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKA 124

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD---Y 567
           GR +EA  +  QM      P   TY V++    K   ++  +R+  D++      D   Y
Sbjct: 125 GRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVY 184

Query: 568 HTSIRLTKFIFKFHSSSSAVNQLVEM-CNLGLIPD 601
              I     I K   +   +NQ+VE  C  G+ PD
Sbjct: 185 TALISGLAKIGKLDEALVYLNQMVENGCARGVEPD 219



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 96/194 (49%), Gaps = 1/194 (0%)

Query: 351 LLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQ 410
           +++ KLV D+    +LL+ +C +G+      L+  +    D+V +  +++  C+    ++
Sbjct: 1   MIDRKLV-DTRVCTALLNGLCKTGQLDRAMLLLDEMPCSPDMVAFTVVINGLCREKRLDE 59

Query: 411 AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
           A  +    +  G  PD  ++   + GLC A ++D+A  + + +           +TA+VD
Sbjct: 60  AFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVD 119

Query: 471 RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
            L++AGR  +A+ +  + + +     + +YTV I GL + GR EEA  ++  M      P
Sbjct: 120 GLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRP 179

Query: 531 NAYTYRVMLLSFCK 544
           +A+ Y  ++    K
Sbjct: 180 DAFVYTALISGLAK 193



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/214 (22%), Positives = 85/214 (39%), Gaps = 39/214 (18%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG 173
           GCV    T+   +  +         +E F  M   G  PN  + NI++  L + G++   
Sbjct: 424 GCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKA 483

Query: 174 I----KVLKETQLPNFLSFNIALCNLC-KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLN 228
                K+L+    P+  +FN  L  LC +L+ V +  ++   MV +G  PN+  + IL++
Sbjct: 484 YFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMD 543

Query: 229 CFCKMGRIAEAYQLLGLMITLGTSLSV--------------------------------N 256
             C+ G +    ++   M++ G +  V                                +
Sbjct: 544 GICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRSAPD 603

Query: 257 AWTV--LIDGFRRLRRLDMAGYLWEKMVQNGCSP 288
           AW+   L+D   R  R++ A  L   M   GC+P
Sbjct: 604 AWSYWSLLDALSRCERMEEARLLSFHMKLQGCAP 637


>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
 gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
          Length = 509

 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 115/466 (24%), Positives = 214/466 (45%), Gaps = 14/466 (3%)

Query: 146 GRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDV 201
            R GF  NT+  N +++V    G      +V K+  +    P+  ++   +   CK   +
Sbjct: 9   ARPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQI 68

Query: 202 SNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVL 261
               +++G M   G  P +  F  L+   C++    +A Q+   MI +        +TV+
Sbjct: 69  PQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVV 128

Query: 262 IDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH 321
           I    ++ +LD+A   +E+MVQ+GC P+ VTYT L+    +A  +       + + S+GH
Sbjct: 129 IGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGH 188

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPK 381
           +P+LV +  +++   K G  D AL +   L      P    + +L+  +C   R     +
Sbjct: 189 SPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARE 248

Query: 382 LVCGLEVEA----DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
           L    E+ A    D++VY + +S  CKAG  ++A  ++  M++ G  PD  S+  ++  L
Sbjct: 249 L---FEMAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSL 305

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV--EKYPL 495
           C   ++ EA  +    +         V T +VD L ++ R  +A  +  R +   ++ P 
Sbjct: 306 CKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAP- 364

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
            VV+Y+  I GL +  R ++AY++  +M+     P+  TY  ++ +FCK   +   + L 
Sbjct: 365 SVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELF 424

Query: 556 QDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           Q + +    LD      L +   +      A+  + EM   G+ P+
Sbjct: 425 QRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPN 470



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 109/498 (21%), Positives = 219/498 (43%), Gaps = 15/498 (3%)

Query: 69  FFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQ--TFLLFL 126
           FF W   +  + H+  + + ++ V        E  R    EL  +    +    T+   +
Sbjct: 3   FFQWAKARPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTL---FRPDDFTYGTLI 59

Query: 127 RIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE----TQL 182
           R + + E     +    EM   G TP       ++  L ++   D  +++  +       
Sbjct: 60  RGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVK 119

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+   + + + +LCK+N +         MV+ G  P+   + +L++   K  +  + +Q+
Sbjct: 120 PDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQI 179

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
              M++ G S  +  +  +++G+ +  R+D A  L  ++   G SP+   Y++LI G  +
Sbjct: 180 FEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCK 239

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
                 A    +M  + G   D++ +   I  L K G  D+A  V+  ++E    PD  +
Sbjct: 240 HDRHDEARELFEM--AAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVS 297

Query: 363 FCSLLSTVCLSGRFSLLPKLV-CGLEVEA--DLVVYNALLSYFCKAGFPNQAVKLYNTML 419
           +  ++ ++C   R S   +L+   +E +    + V   L+   CK+    +A  +   ML
Sbjct: 298 YNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERML 357

Query: 420 DKG-FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
           + G   P   ++  ++ GLC A ++D+A  V Q +       +   +TAI+D   + GR 
Sbjct: 358 ETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRL 417

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            +A +LF+R       LDVV+Y + IRG     + +EA  +  +M    + PN  +   +
Sbjct: 418 DEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTI 477

Query: 539 LLSFCKERNIKMVKRLLQ 556
           +   CKE  ++  + L++
Sbjct: 478 VDGLCKESRVEEARLLME 495



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 105/431 (24%), Positives = 186/431 (43%), Gaps = 43/431 (9%)

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           ++GE+   G      TF   +R           L+ F +M      P+ F   +V+  L 
Sbjct: 74  LLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLC 133

Query: 166 KIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
           KI ++DL      ++++   LP+ +++ + + +L K         +   M+ KG  P + 
Sbjct: 134 KINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELV 193

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE-- 279
            +  ++N +CK GRI +A  L+  +   G S S + ++ LIDG  +  R D A  L+E  
Sbjct: 194 TYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFEMA 253

Query: 280 -------------------------------KMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
                                          KM++ GC+P+ V+Y  +I    +    S 
Sbjct: 254 AGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSE 313

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL-KLVPDSYTFCSLL 367
           A   +D        P +    VL+D L K    ++A  + + +LE     P   T+ +++
Sbjct: 314 AKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVI 373

Query: 368 STVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
             +C + R    + +L K+     V  D+V Y A++  FCK G  ++A +L+  M ++G 
Sbjct: 374 DGLCKADRLDDAYVVLQKMRRAGCV-PDVVTYTAIIDAFCKVGRLDEARELFQRMHERGC 432

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
             D  ++  L+RG C A K+DEAI + + +       N    + IVD L +  R  +A  
Sbjct: 433 ALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARL 492

Query: 484 LFRRAIVEKYP 494
           L  +   E  P
Sbjct: 493 LMEKMNFESLP 503



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 82/349 (23%), Positives = 153/349 (43%), Gaps = 65/349 (18%)

Query: 68  SFFIWCAKQRDY--FHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
           S F  C  ++ +  F ++ S  H   +VT  T        +V    + G + +A + +  
Sbjct: 166 SLFKACKWEQGHQIFEEMLSKGHSPELVTYAT--------VVNGYCKAGRIDQALSLMRR 217

Query: 126 LRIYWR---GEMYGMVLEAFDEMGRFGFTPNTF--ARNIVMDV---------LFKIGRVD 171
           L+   R   G +Y  +++   +  R       F  A   V DV         L K G++D
Sbjct: 218 LKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFEMAAGDVQDVIVYTSFISGLCKAGKLD 277

Query: 172 ----LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILL 227
               + +K+++    P+ +S+N+ + +LCK N VS  K+++   + +   P V +  +L+
Sbjct: 278 EAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLV 337

Query: 228 NCFCKMGRIAEAYQLLGLMITLGT-SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGC 286
           +  CK  R+ EA  +L  M+  G  + SV  ++ +IDG  +  RLD A  + +KM + GC
Sbjct: 338 DGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGC 397

Query: 287 SPNVVTYTS-----------------------------------LIKGFMEAKMFSIAFS 311
            P+VVTYT+                                   LI+G+  A     A +
Sbjct: 398 VPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIA 457

Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
            ++ +   G  P++V  + ++D L K    ++A  + +  +  + +PDS
Sbjct: 458 MIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEK-MNFESLPDS 505



 Score = 40.8 bits (94), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 28/144 (19%), Positives = 63/144 (43%), Gaps = 2/144 (1%)

Query: 461 NAHVHTAIVDRLIEAGRCHK-AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
           N +   ++++  +  G CH+ A ++F+  +V  +  D  +Y   IRG  +  +  +A  L
Sbjct: 16  NTYTCNSLLEVFVNDG-CHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQAVNL 74

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK 579
             +MK   + P   T+  ++   C+        ++   +ID +++ D      +   + K
Sbjct: 75  LGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCK 134

Query: 580 FHSSSSAVNQLVEMCNLGLIPDEM 603
            +    A +    M   G +PD++
Sbjct: 135 INKLDLAASYFERMVQSGCLPDKV 158


>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 123/475 (25%), Positives = 220/475 (46%), Gaps = 31/475 (6%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVM------DVLFKI 167
           GC    + F   +  Y R   Y    +   +MG  G  P     NI++      + L  +
Sbjct: 364 GCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSL 423

Query: 168 GRVDLGIKVLKE-----TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
             ++L  K   E       L      N+A C LC          +I  M+ KGF P+   
Sbjct: 424 DVLELAEKAYGEMLDAHVVLNKVNVSNLARC-LCGAGKFEKAYSIIREMMSKGFIPDTST 482

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           +  ++   C   ++  A+ L   M +      V  +T+LID F ++  L  A   +++MV
Sbjct: 483 YSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMV 542

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
           ++GC+PNVVTYT+LI  +++A+  S A    +M+ SEG  P++V +  LID   K G  +
Sbjct: 543 RDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIE 602

Query: 343 DALDVYDGLLELKLVPDS----------------YTFCSLLSTVCLSGRFSLLPKLVCGL 386
            A  +Y  +     +PD                 +T+ +L+  +C + +      L+  +
Sbjct: 603 KACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVM 662

Query: 387 EVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
            VE    + +VY+AL+  FCK G  ++A  ++  M ++G+ P+ Y++  L+  L   +++
Sbjct: 663 SVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRL 722

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           D A+ V   ++ N+ A N  ++T ++D L + G+  +A +L      +    +VV+YT  
Sbjct: 723 DLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAM 782

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           I G  + G+ ++   L  QM      PN  TYRV++   C    +    +LL ++
Sbjct: 783 IDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEM 837



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/404 (24%), Positives = 188/404 (46%), Gaps = 25/404 (6%)

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
           +PN +++ I LC   +   +   K ++ MM+ +G YP+ R+F  L++ +C+ G  + AY+
Sbjct: 331 IPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYK 390

Query: 242 LLGLMITLGTSLSVNAWTVLIDG------FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
           LL  M   G       + +LI G         L  L++A   + +M+      N V  ++
Sbjct: 391 LLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSN 450

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           L +    A  F  A+S +  + S+G  PD   ++ +I  L      D+A  +++ +    
Sbjct: 451 LARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNH 510

Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAV 412
           +VPD +T+  L+ + C  G      K    +  +    ++V Y AL+  + KA   + A 
Sbjct: 511 VVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSAN 570

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN--PAV---------- 460
           +L+  ML +G  P+  ++  L+ G C + +I++A  +Y  +  N   P V          
Sbjct: 571 ELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGN 630

Query: 461 ----NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
               N   + A+VD L +A +  +A  L     VE    + + Y   I G  + G+ +EA
Sbjct: 631 IRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEA 690

Query: 517 YILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
            +++++M      PN YTY  ++    K++ + +  ++L  +++
Sbjct: 691 QMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLE 734



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 102/445 (22%), Positives = 185/445 (41%), Gaps = 58/445 (13%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G  +  R    E+ R GC     T+   +  Y +        E F+ M   G  PN    
Sbjct: 529 GLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTY 588

Query: 158 NIVMDVLFKIGRVDLGIKVLKE--------------------TQLPNFLSFNIALCNLCK 197
             ++D   K G+++   ++                        + PN  ++   +  LCK
Sbjct: 589 TALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCK 648

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            + V   +D++ +M  +G  PN  +++ L++ FCK+G++ EA  +   M   G   +V  
Sbjct: 649 AHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYT 708

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           ++ LID   + +RLD+A  +  +M++N C+PNV+ YT +I G  +      A+  + M+E
Sbjct: 709 YSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMME 768

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG--- 374
            +G  P++V +  +ID   K G  D  L++   +      P+  T+  L++  C +G   
Sbjct: 769 EKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLD 828

Query: 375 ---------RFSLLPKLVCGL-------------------EVEADLVV-----YNALLSY 401
                    + +  PK + G                    E+  ++ V     Y  L+  
Sbjct: 829 DAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDS 888

Query: 402 FCKAGFPNQAVKLYNTM--LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
           FCKAG    A++L+  M         D   +  L+  L  A K+D+A  +Y  ++     
Sbjct: 889 FCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGI 948

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQL 484
               +   +V  LI   R  +A+QL
Sbjct: 949 PELSIFFYLVKGLIRINRWEEALQL 973



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 111/518 (21%), Positives = 215/518 (41%), Gaps = 27/518 (5%)

Query: 65  IALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLL 124
           + + FFIW  +Q  Y H    + H +  V    G        + E+      I  +   +
Sbjct: 144 LGVKFFIWAGRQIGYGHTGPVY-HALLEVLGCGGNDRVPEQFLREIRDEDKEILGKLLNV 202

Query: 125 FLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPN 184
            +R   R  ++ + LE    +   G+ P+    N ++ V  +  R+D    V +E     
Sbjct: 203 LIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSG 262

Query: 185 FLSFNIAL-CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
           F      L C +  L      ++ + ++ ++ F  +  ++  +++  C+     EA   L
Sbjct: 263 FNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFL 322

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
             M +     +V  + +L+ G  R R+L     +   M+  GC P+   + SLI  +  +
Sbjct: 323 SRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRS 382

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL---SKMGSYDD---ALDVYDGLLELKLV 357
             +S A+  L  +   G  P  V +N+LI  +    K+ S D    A   Y  +L+  +V
Sbjct: 383 GDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVV 442

Query: 358 PDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKL 414
            +     +L   +C +G+F     ++  +  +    D   Y+ ++   C A   + A  L
Sbjct: 443 LNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLL 502

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
           +  M      PD +++  L+   C    + +A   +  +V +  A N   +TA++   ++
Sbjct: 503 FEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLK 562

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIA-VP---- 529
           A +   A +LF   + E    +VV+YT  I G  + G+ E+A  +Y++M+  A +P    
Sbjct: 563 ARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDM 622

Query: 530 -----------PNAYTYRVMLLSFCKERNIKMVKRLLQ 556
                      PN +TY  ++   CK   +K  + LL 
Sbjct: 623 YFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLD 660



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 93/392 (23%), Positives = 173/392 (44%), Gaps = 16/392 (4%)

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
           ++  +L+   C+ G    A + LG +  LG   S   +  L+  F    RLD A  +  +
Sbjct: 198 KLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHRE 257

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           M  +G + +  T    +    +A  +  A   L ++E E    D V +  +I  L +   
Sbjct: 258 MSDSGFNMDGYTLGCFVHLLCKAGRWREA---LALIEKEEFKLDTVIYTQMISGLCEASL 314

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS----GRFSLLPKLVCGLEVEADLVVYN 396
           +++A+D    +     +P+  T+  LL   CL     GR   +  ++          ++N
Sbjct: 315 FEEAMDFLSRMRSSSCIPNVVTYRILLCG-CLRKRQLGRCKRILSMMITEGCYPSRRIFN 373

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID-----EAINVYQ 451
           +L+  +C++G  + A KL   M D G  P    +  L+ G+CG  K+      E      
Sbjct: 374 SLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAY 433

Query: 452 GIVMNNPAVNAHVHTAIVDR-LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
           G +++   V   V+ + + R L  AG+  KA  + R  + + +  D  +Y+  I  L   
Sbjct: 434 GEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNA 493

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
            + + A++L+ +MK   V P+ +TY +++ SFCK   ++  ++   +++      +  T 
Sbjct: 494 SKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTY 553

Query: 571 IRLTKFIFKFHSSSSAVNQLVE-MCNLGLIPD 601
             L     K    SSA N+L E M + G IP+
Sbjct: 554 TALIHAYLKARKMSSA-NELFEMMLSEGCIPN 584



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 64/289 (22%), Positives = 115/289 (39%), Gaps = 78/289 (26%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCK 197
           F +M   G+ PN +  + ++D LFK  R+DL +KVL    + +  PN + +   +  LCK
Sbjct: 694 FTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCK 753

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMF---------------------------------- 223
           +        ++ MM  KG +PNV  +                                  
Sbjct: 754 VGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVT 813

Query: 224 -EILLNCFCKMGRIAEAYQLL------------------------------GLMITLGTS 252
             +L+N  C  G + +A+QLL                              GL+  +  +
Sbjct: 814 YRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAEN 873

Query: 253 LSVN---AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVT----YTSLIKGFMEAKM 305
           ++V    A+ +LID F +  RL++A  L ++M  + C+         Y+SLI+    A  
Sbjct: 874 VAVPIIPAYRILIDSFCKAGRLELALELHKEM--SSCTSYSAADKDLYSSLIESLSLASK 931

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
              AF     +   G  P+L     L+  L ++  +++AL + D + ++
Sbjct: 932 VDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQLSDCICQM 980



 Score = 44.3 bits (103), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 46/227 (20%), Positives = 94/227 (41%), Gaps = 16/227 (7%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G+ +    ++  +   GC     T+   +  + +       LE   +MG  G  PN    
Sbjct: 755 GKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTY 814

Query: 158 NIVMDVLFKIGRVDLGIKVL---KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
            ++++     G +D   ++L   K+T  P  ++         K+ +  N + +I + +  
Sbjct: 815 RVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMA------GYRKVIEGFNREFIISLGLLD 868

Query: 215 GFYPNVRM-----FEILLNCFCKMGRIAEAYQLLGLM--ITLGTSLSVNAWTVLIDGFRR 267
               NV +     + IL++ FCK GR+  A +L   M   T  ++   + ++ LI+    
Sbjct: 869 EIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSL 928

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
             ++D A  L+  M++ G  P +  +  L+KG +    +  A    D
Sbjct: 929 ASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQLSD 975


>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 671

 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 117/440 (26%), Positives = 207/440 (47%), Gaps = 9/440 (2%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           ++E    ++ E+ R  C     TF   +R + +  +    ++  D M ++G TP+    +
Sbjct: 227 QWEDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYS 286

Query: 159 IVMDVLFKIGRVDLGIKVLKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFY 217
            +++   + GRVD  I++L      PN + +N AL  LC      +V  +I  MVRK   
Sbjct: 287 TLVNGFSEQGRVDDAIELLNGMLCKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCL 346

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
           PN   F +L +C C+ G +  A ++L  M   G       +  LI  F    R+D A  L
Sbjct: 347 PNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKL 406

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL-DMLESEGHAPDLVFHNVLIDCLS 336
              M    CSP+V+++ + +KG   A+ +  A   +  ML  +    ++ F N+LID L 
Sbjct: 407 LNSMP---CSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTF-NILIDSLC 462

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYN 396
           + G  ++A++V++ + +    PD  T+ SL++ +   G      +L   +  + D+  YN
Sbjct: 463 QNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMPCKPDIFGYN 522

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
           A+L   C+A     A +L + M  K   P+  +F  L+  LC    +D AI V++ +   
Sbjct: 523 AVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKY 582

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
               +   + A+++   E GR   A +L      +    D VSY  A++GL    R +EA
Sbjct: 583 GSTPDIFTYNALINGFSEQGRLDDARRLLSTMSCKP---DAVSYNSALKGLCRAERWKEA 639

Query: 517 YILYSQMKHIAVPPNAYTYR 536
             + ++M  +  PPN  T++
Sbjct: 640 EEVVAEMLRMKCPPNEVTFK 659



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 171/364 (46%), Gaps = 50/364 (13%)

Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
           NV  +  L+N +C+ GR+A+A  L+  M     + + N  TVL+ G    R+ + A  L 
Sbjct: 179 NVVTYTTLINGYCRSGRLADALALIASMPVAPDTYTYN--TVLM-GLCGARQWEDAEALM 235

Query: 279 EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
            +MV+N C PN VT+ + I+ F +  +   A   LD +   G  PD+V ++ L++  S+ 
Sbjct: 236 AEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQ 295

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV--------------- 383
           G  DDA+++ +G+L     P++  + + L  +C++ R+  + +L+               
Sbjct: 296 GRVDDAIELLNGML---CKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATF 352

Query: 384 --------------CGLEV---------EADLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
                         C +EV           D V+YN L+  F + G  + A+KL N+M  
Sbjct: 353 SMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSM-- 410

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
              +PD  SF   L+GLC A + D+A  +   ++  +  +       ++D L + GR + 
Sbjct: 411 -PCSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNN 469

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
           AI++F +        D+V+Y+  I GL E G  E A  L+  M      P+ + Y  +L 
Sbjct: 470 AIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMP---CKPDIFGYNAVLK 526

Query: 541 SFCK 544
             C+
Sbjct: 527 GLCR 530



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 110/490 (22%), Positives = 217/490 (44%), Gaps = 22/490 (4%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD----LGIKV 176
           T+   +  Y R    G + +A   +      P+T+  N V+  L    + +    L  ++
Sbjct: 182 TYTTLINGYCRS---GRLADALALIASMPVAPDTYTYNTVLMGLCGARQWEDAEALMAEM 238

Query: 177 LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
           ++    PN ++F   +   C+   +     ++  M + G  P+V ++  L+N F + GR+
Sbjct: 239 VRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQGRV 298

Query: 237 AEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSL 296
            +A +LL  M+    ++  NA    + G    +R +  G L  +MV+  C PN  T++ L
Sbjct: 299 DDAIELLNGMLCKPNTICYNA---ALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSML 355

Query: 297 IKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
                +  +   A   L+ +   G  PD V +N LI   S+ G  DDAL +   L  +  
Sbjct: 356 TSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKL---LNSMPC 412

Query: 357 VPDSYTFCSLLSTVCLSGRFSLLPKLVCG-LEVEADLV--VYNALLSYFCKAGFPNQAVK 413
            PD  +F + L  +C + R+    +L+   L  +  L+   +N L+   C+ G  N A++
Sbjct: 413 SPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIE 472

Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
           ++  M   G TPD  ++  L+ GL     ++ AI ++Q +       +   + A++  L 
Sbjct: 473 VFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMPCK---PDIFGYNAVLKGLC 529

Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
            A R   A +L      +  P + +++ + I  L + G  + A  ++ QM      P+ +
Sbjct: 530 RAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIF 589

Query: 534 TYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEM 593
           TY  ++  F ++  +   +RLL  +      + Y++++   K + +      A   + EM
Sbjct: 590 TYNALINGFSEQGRLDDARRLLSTMSCKPDAVSYNSAL---KGLCRAERWKEAEEVVAEM 646

Query: 594 CNLGLIPDEM 603
             +   P+E+
Sbjct: 647 LRMKCPPNEV 656



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 84/177 (47%), Gaps = 3/177 (1%)

Query: 50  PHIV-HSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVG 108
           P IV +S+L+N  S+   +   I   +      D+  ++ ++  + R   R+E    ++ 
Sbjct: 484 PDIVTYSSLINGLSEQGLVESAIELFQSMPCKPDIFGYNAVLKGLCR-AARWEDAGELIS 542

Query: 109 ELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIG 168
            +AR  C     TF + +    +  +    +E F++M ++G TP+ F  N +++   + G
Sbjct: 543 NMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQG 602

Query: 169 RVDLGIKVLKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFE 224
           R+D   ++L      P+ +S+N AL  LC+       ++V+  M+R    PN   F+
Sbjct: 603 RLDDARRLLSTMSCKPDAVSYNSALKGLCRAERWKEAEEVVAEMLRMKCPPNEVTFK 659


>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 123/475 (25%), Positives = 220/475 (46%), Gaps = 31/475 (6%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVM------DVLFKI 167
           GC    + F   +  Y R   Y    +   +MG  G  P     NI++      + L  +
Sbjct: 364 GCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSL 423

Query: 168 GRVDLGIKVLKE-----TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
             ++L  K   E       L      N+A C LC          +I  M+ KGF P+   
Sbjct: 424 DVLELAEKAYGEMLDAHVVLNKVNVSNLARC-LCGAGKFEKAYSIIREMMSKGFIPDTST 482

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           +  ++   C   ++  A+ L   M +      V  +T+LID F ++  L  A   +++MV
Sbjct: 483 YSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMV 542

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
           ++GC+PNVVTYT+LI  +++A+  S A    +M+ SEG  P++V +  LID   K G  +
Sbjct: 543 RDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIE 602

Query: 343 DALDVYDGLLELKLVPDS----------------YTFCSLLSTVCLSGRFSLLPKLVCGL 386
            A  +Y  +     +PD                 +T+ +L+  +C + +      L+  +
Sbjct: 603 KACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVM 662

Query: 387 EVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
            VE    + +VY+AL+  FCK G  ++A  ++  M ++G+ P+ Y++  L+  L   +++
Sbjct: 663 SVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRL 722

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           D A+ V   ++ N+ A N  ++T ++D L + G+  +A +L      +    +VV+YT  
Sbjct: 723 DLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAM 782

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           I G  + G+ ++   L  QM      PN  TYRV++   C    +    +LL ++
Sbjct: 783 IDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEM 837



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 97/404 (24%), Positives = 188/404 (46%), Gaps = 25/404 (6%)

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
           +PN +++ I LC   +   +   K ++ MM+ +G YP+ R+F  L++ +C+ G  + AY+
Sbjct: 331 IPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYK 390

Query: 242 LLGLMITLGTSLSVNAWTVLIDG------FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
           LL  M   G       + +LI G         L  L++A   + +M+      N V  ++
Sbjct: 391 LLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSN 450

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           L +    A  F  A+S +  + S+G  PD   ++ +I  L      D+A  +++ +    
Sbjct: 451 LARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNH 510

Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAV 412
           +VPD +T+  L+ + C  G      K    +  +    ++V Y AL+  + KA   + A 
Sbjct: 511 VVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSAN 570

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN--PAV---------- 460
           +L+  ML +G  P+  ++  L+ G C + +I++A  +Y  +  N   P V          
Sbjct: 571 ELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGN 630

Query: 461 ----NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
               N   + A+VD L +A +  +A  L     VE    + + Y   I G  + G+ +EA
Sbjct: 631 IRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEA 690

Query: 517 YILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
            +++++M      PN YTY  ++    K++ + +  ++L  +++
Sbjct: 691 QMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLE 734



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/438 (22%), Positives = 180/438 (41%), Gaps = 58/438 (13%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G  +  R    E+ R GC     T+   +  Y +        E F+ M   G  PN    
Sbjct: 529 GLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTY 588

Query: 158 NIVMDVLFKIGRVDLGIKVLKE--------------------TQLPNFLSFNIALCNLCK 197
             ++D   K G+++   ++                        + PN  ++   +  LCK
Sbjct: 589 TALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCK 648

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            + V   +D++ +M  +G  PN  +++ L++ FCK+G++ EA  +   M   G   +V  
Sbjct: 649 AHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYT 708

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           ++ LID   + +RLD+A  +  +M++N C+PNV+ YT +I G  +      A+  + M+E
Sbjct: 709 YSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMME 768

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG--- 374
            +G  P++V +  +ID   K G  D  L++   +      P+  T+  L++  C +G   
Sbjct: 769 EKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLD 828

Query: 375 ---------RFSLLPKLVCGL-------------------EVEADLVV-----YNALLSY 401
                    + +  PK + G                    E+  ++ V     Y  L+  
Sbjct: 829 DAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDS 888

Query: 402 FCKAGFPNQAVKLYNTM--LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
           FCKAG    A++L+  M         D   +  L+  L  A K+D+A  +Y  ++     
Sbjct: 889 FCKAGRLELALELHKXMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGI 948

Query: 460 VNAHVHTAIVDRLIEAGR 477
               +   +V  LI   R
Sbjct: 949 PELSIFFYLVKGLIRINR 966



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 110/518 (21%), Positives = 216/518 (41%), Gaps = 27/518 (5%)

Query: 65  IALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLL 124
           + + FFIW  +Q  Y H    +  ++ V+    G        + E+      I  +   +
Sbjct: 144 LGVKFFIWAGRQIGYGHTGPVYHALLEVLG-CGGNDRVPEQFLREIRDEDKEILGKLLNV 202

Query: 125 FLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPN 184
            +R   R  ++ + LE    +   G+ P+    N ++ V  +  R+D    V +E     
Sbjct: 203 LIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSG 262

Query: 185 FLSFNIAL-CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
           F      L C +  L      ++ + ++ ++ F  +  ++  +++  C+     EA   L
Sbjct: 263 FNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFL 322

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
             M +     +V  + +L+ G  R R+L     +   M+  GC P+   + SLI  +  +
Sbjct: 323 SRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRS 382

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL---SKMGSYDD---ALDVYDGLLELKLV 357
             +S A+  L  +   G  P  V +N+LI  +    K+ S D    A   Y  +L+  +V
Sbjct: 383 GDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVV 442

Query: 358 PDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKL 414
            +     +L   +C +G+F     ++  +  +    D   Y+ ++   C A   + A  L
Sbjct: 443 LNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLL 502

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
           +  M      PD +++  L+   C    + +A   +  +V +  A N   +TA++   ++
Sbjct: 503 FEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLK 562

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIA-VP---- 529
           A +   A +LF   + E    +VV+YT  I G  + G+ E+A  +Y++M+  A +P    
Sbjct: 563 ARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDM 622

Query: 530 -----------PNAYTYRVMLLSFCKERNIKMVKRLLQ 556
                      PN +TY  ++   CK   +K  + LL 
Sbjct: 623 YFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLD 660



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 93/392 (23%), Positives = 173/392 (44%), Gaps = 16/392 (4%)

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
           ++  +L+   C+ G    A + LG +  LG   S   +  L+  F    RLD A  +  +
Sbjct: 198 KLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHRE 257

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           M  +G + +  T    +    +A  +  A   L ++E E    D V +  +I  L +   
Sbjct: 258 MSDSGFNMDGYTLGCFVHLLCKAGRWREA---LALIEKEEFKLDTVIYTQMISGLCEASL 314

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS----GRFSLLPKLVCGLEVEADLVVYN 396
           +++A+D    +     +P+  T+  LL   CL     GR   +  ++          ++N
Sbjct: 315 FEEAMDFLSRMRSSSCIPNVVTYRILLCG-CLRKRQLGRCKRILSMMITEGCYPSRRIFN 373

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID-----EAINVYQ 451
           +L+  +C++G  + A KL   M D G  P    +  L+ G+CG  K+      E      
Sbjct: 374 SLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAY 433

Query: 452 GIVMNNPAVNAHVHTAIVDR-LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
           G +++   V   V+ + + R L  AG+  KA  + R  + + +  D  +Y+  I  L   
Sbjct: 434 GEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNA 493

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
            + + A++L+ +MK   V P+ +TY +++ SFCK   ++  ++   +++      +  T 
Sbjct: 494 SKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTY 553

Query: 571 IRLTKFIFKFHSSSSAVNQLVE-MCNLGLIPD 601
             L     K    SSA N+L E M + G IP+
Sbjct: 554 TALIHAYLKARKMSSA-NELFEMMLSEGCIPN 584


>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
          Length = 855

 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 133/515 (25%), Positives = 222/515 (43%), Gaps = 45/515 (8%)

Query: 63  DLIALSFFIWCAKQRDYFHDVQSFDH----------MISVVTRLTGRFET-----VRGIV 107
           D +  +  I    +  YF +  SF H          +++  T L+G  +       + I+
Sbjct: 106 DTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRII 165

Query: 108 GELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVM------ 161
             +   GC      F   +  Y   + Y    +  + M   G  P     NI +      
Sbjct: 166 NMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQ 225

Query: 162 DVLFKIGRVDLGIKVLKETQLPNFLSFNIALCN----LCKLNDVSNVKDVIGMMVRKGFY 217
           + L     +DL  K+  E    N +   + + N    LC +        +I  M+RKGF 
Sbjct: 226 EKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFV 285

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
           P+   +  ++   C   ++ +A+ L   M  +G +  V  +T+LID F +   ++ A +L
Sbjct: 286 PDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWL 345

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
           +E+M   GCSP VVTYT+LI  +++AK    A      +   G  P+ V +  L+D L K
Sbjct: 346 FEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCK 405

Query: 338 MGSYDDALDVYDGLLELKLVPDS--YTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVY 395
            G+   A +VY  L+      DS  Y  C          R +L P          ++V Y
Sbjct: 406 AGNISKAFEVYAKLIGTSDSADSDFYFPC--------EDRHTLAP----------NVVTY 447

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
            AL+   CKA   + A +L + ML  G  P++  +  L+ G C A KID A  V+  +  
Sbjct: 448 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 507

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
                + H +T+++DR+ + GR   A+++  + + +    +VV+YT  I GL   G +E+
Sbjct: 508 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEK 567

Query: 516 AYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
           A  L S M+     PN  TY  ++    K   I +
Sbjct: 568 ALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDL 602



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 112/461 (24%), Positives = 201/461 (43%), Gaps = 59/461 (12%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV ++  +I    +  G  E  + +  E+  VGC     T+   +  Y + +      + 
Sbjct: 322 DVYTYTILIDSFCK-AGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDI 380

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL--------------------KETQ 181
           F  M   G  PN      ++D L K G +    +V                     + T 
Sbjct: 381 FHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTL 440

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
            PN +++   +  LCK + V +  +++  M+  G  PN  +++ L++ FCK G+I  A +
Sbjct: 441 APNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQE 500

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           +   M   G   SV+ +T LID   +  RLD+A  +  +M+++ C+PNVVTYT++I G  
Sbjct: 501 VFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLC 560

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
                  A   L ++E +G +P++V +  LID L K G  D +LD++  +      P+  
Sbjct: 561 RIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYV 620

Query: 362 TFCSLLSTVCLSG------------RFSLLPKLVCGL-------------------EVEA 390
           T+  L++ +C +G            + +  PK + G                    E+E+
Sbjct: 621 TYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMES 680

Query: 391 D-----LVVYNALLSYFCKAGFPNQAVKLYNTMLD--KGFTPDNYSFVGLLRGLCGARKI 443
                   VY  L+  F KAG    A++L+  M++       DN  +  L++ LC A ++
Sbjct: 681 YGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQV 740

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           +EA  +Y  +          V   ++  L+E  +  +A+QL
Sbjct: 741 EEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 781



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 113/524 (21%), Positives = 205/524 (39%), Gaps = 63/524 (12%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFL--SFNIALCNLCK 197
           ++ D +  FG+ P+    N ++ VL   G+VDLG +V KE     F    F +  C    
Sbjct: 26  DSEDPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVG-CFAHA 84

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
           L       D + M+ R+ F  +  +   +++   +     EA   L  M       +V  
Sbjct: 85  LCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVT 144

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  L+ GF + ++L     +   M+  GC+PN   + SL+  +   K ++ A+  L+ + 
Sbjct: 145 YRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMT 204

Query: 318 SEGHAPDLVFHNVLID-----------------------------------------CLS 336
           + G  P  V +N+ I                                          CL 
Sbjct: 205 TCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLC 264

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLV 393
            +G +D A  +   ++    VPD+ T+  +++ +C + +     LL + +  + V  D+ 
Sbjct: 265 GVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVY 324

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            Y  L+  FCKAG   QA  L+  M   G +P   ++  L+     A+++ +A +++  +
Sbjct: 325 TYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRM 384

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD----------------V 497
           V      N   + A+VD L +AG   KA +++ + I      D                V
Sbjct: 385 VDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNV 444

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
           V+Y   + GL +  + + A+ L   M      PN   Y  ++  FCK   I   + +   
Sbjct: 445 VTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQ 504

Query: 558 VIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           +         HT   L   +FK      A+  L +M      P+
Sbjct: 505 MTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPN 548



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 108/484 (22%), Positives = 194/484 (40%), Gaps = 68/484 (14%)

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIA 191
           G   +A D + R  F  +T     ++  L +    D  +  L   +    +PN +++   
Sbjct: 89  GRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTL 148

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           L    K   +   K +I MM+ +G  PN  +F  L++ +C     A AY+LL  M T G 
Sbjct: 149 LSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGC 208

Query: 252 SLSVNAWTVLID---GFRRLRR---LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
                 + + I    G  +L     LD+A  ++ +M+   C  N V   +  +       
Sbjct: 209 PPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGK 268

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
           F  AF  +  +  +G  PD   ++ +I  L      + A  ++  +  + + PD YT+  
Sbjct: 269 FDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTI 328

Query: 366 LLSTVCLSGR-------FSLLPKLVCGLEV------------------------------ 388
           L+ + C +G        F  +  + C   V                              
Sbjct: 329 LIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAG 388

Query: 389 -EADLVVYNALLSYFCKAGFPNQAVKLYNTML------DKGF----------TPDNYSFV 431
              + V Y AL+   CKAG  ++A ++Y  ++      D  F           P+  ++ 
Sbjct: 389 CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYG 448

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            L+ GLC A K+D A  +   ++ +    N  V+ A++D   +AG+   A ++F +    
Sbjct: 449 ALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKC 508

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK----ERN 547
            Y   V +YT  I  + + GR + A  + SQM   +  PN  TY  M+   C+    E+ 
Sbjct: 509 GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKA 568

Query: 548 IKMV 551
           +K++
Sbjct: 569 LKLL 572


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 104/416 (25%), Positives = 200/416 (48%), Gaps = 8/416 (1%)

Query: 115 CVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI 174
           C   + T+   +  + +   +       DEM + G  P+    N ++  L   GRVD  +
Sbjct: 29  CSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSAL 88

Query: 175 KVLKETQ---LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFC 231
              ++ Q    P+ +++ I +  LCK   +S+   ++  M+  G  PNV  +  L+N FC
Sbjct: 89  VHYRDMQRHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFC 148

Query: 232 KMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVV 291
           K+G + EA  L   M+    S  V  + +LIDG+ +  R      L ++MV+ GC PN +
Sbjct: 149 KLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFI 208

Query: 292 TYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGL 351
           TY +L+   +++  +  AF+   M+      P     N++ID   K+G  D A +++  +
Sbjct: 209 TYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLM 268

Query: 352 LELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLVCGLEVEADLVVYNALLSYFCKAGF 407
            +   +PD YT+  ++S  C + R      LL ++        D+V YN+++S  CKA  
Sbjct: 269 TDRGCLPDIYTYNIMISGACRANRIDDARQLLERMT-EAGCPPDVVTYNSIVSGLCKASQ 327

Query: 408 PNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTA 467
            ++A ++Y  + + G+  D  +   L+ GLC +R++D+A  + + +  N  A +   +T 
Sbjct: 328 VDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTI 387

Query: 468 IVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM 523
           ++    +A +  K++  F   + +     V++Y++ I  L +  R  +  +L   M
Sbjct: 388 LIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTM 443



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 102/382 (26%), Positives = 177/382 (46%), Gaps = 19/382 (4%)

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           L+  F R ++   A  L++  +   CSP+ +TY++LI GF +A+ F  A+  LD +E  G
Sbjct: 4   LLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRG 63

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
             P    +N +I  L   G  D AL  Y   ++    P   T+  L+  +C S R S   
Sbjct: 64  IVPHNAVYNTIIKGLCDNGRVDSALVHYRD-MQRHCAPSVITYTILVDALCKSARIS-DA 121

Query: 381 KLVCGLEVEA----DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
            L+    +EA    ++V YN L++ FCK G  ++AV L+N ML+   +PD +++  L+ G
Sbjct: 122 SLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDG 181

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
            C   +  +   + Q +V      N   +  ++D L+++G+   A  L +  +       
Sbjct: 182 YCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPS 241

Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
             ++ + I    + G+ + AY L+  M      P+ YTY +M+   C+   I   ++LL+
Sbjct: 242 HFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLE 301

Query: 557 DVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMT 616
            + +A    D  T   +   + K    +S V++  E+        E+ R  G   D  +T
Sbjct: 302 RMTEAGCPPDVVTYNSIVSGLCK----ASQVDEAYEV-------YEVLRNGGYFLD-VVT 349

Query: 617 PVSLFDGFVPCERRAGNANHLL 638
             +L DG     RR  +A  LL
Sbjct: 350 CSTLIDGLCK-SRRLDDAEKLL 370



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 98/390 (25%), Positives = 181/390 (46%), Gaps = 21/390 (5%)

Query: 48  LAPH-IVHSTLLN--CPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVR 104
           + PH  V++T++   C +  +  +   +   QR     V ++  ++  + + + R     
Sbjct: 64  IVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCAPSVITYTILVDALCK-SARISDAS 122

Query: 105 GIVGELARVGCVIKAQTFLLFLRIYWR-GEMYGMVLEAFDEMGRFGFTPNTFARNIVMDV 163
            I+ ++   GC     T+   +  + + G M   V+  F++M     +P+ F  NI++D 
Sbjct: 123 LILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVV-LFNQMLENSCSPDVFTYNILIDG 181

Query: 164 LFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN 219
             K  R   G K+L+E       PNF+++N  + +L K     +  ++  MM+R+   P+
Sbjct: 182 YCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPS 241

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
              F ++++ FCK+G++  AY+L  LM   G    +  + ++I G  R  R+D A  L E
Sbjct: 242 HFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLE 301

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
           +M + GC P+VVTY S++ G  +A     A+   ++L + G+  D+V  + LID L K  
Sbjct: 302 RMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSR 361

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-------FSLLPKLVCGLEVEADL 392
             DDA  +   +      PD   +  L+   C + +       FS +    C   V    
Sbjct: 362 RLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTV---- 417

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
           + Y+ ++   CK+        L  TML++G
Sbjct: 418 ITYSIVIDKLCKSARVRDGCMLLKTMLERG 447



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/384 (24%), Positives = 158/384 (41%), Gaps = 33/384 (8%)

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
           P+   +  L+N FCK     +AY+LL  M   G       +  +I G     R+D A   
Sbjct: 31  PDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVH 90

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
           +  M Q  C+P+V+TYT L+    ++   S A   L+ +   G AP++V +N LI+   K
Sbjct: 91  YRDM-QRHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCK 149

Query: 338 MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNA 397
           +G+ D+A+ +++ +LE    PD +T                                YN 
Sbjct: 150 LGNMDEAVVLFNQMLENSCSPDVFT--------------------------------YNI 177

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
           L+  +CK   P    KL   M+  G  P+  ++  L+  L  + K  +A N+ Q ++  +
Sbjct: 178 LIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRD 237

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAY 517
              +      ++D   + G+   A +LF+         D+ +Y + I G     R ++A 
Sbjct: 238 CKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDAR 297

Query: 518 ILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFI 577
            L  +M     PP+  TY  ++   CK   +     + + + +    LD  T   L   +
Sbjct: 298 QLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGL 357

Query: 578 FKFHSSSSAVNQLVEMCNLGLIPD 601
            K      A   L EM   G  PD
Sbjct: 358 CKSRRLDDAEKLLREMERNGSAPD 381



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 95/227 (41%), Gaps = 34/227 (14%)

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY----- 450
           N LLS F +     +A  L+   L    +PD+ ++  L+ G C AR   +A  +      
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 451 QGIVMNNPAVN--------------AHVH---------------TAIVDRLIEAGRCHKA 481
           +GIV +N   N              A VH               T +VD L ++ R   A
Sbjct: 62  RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCAPSVITYTILVDALCKSARISDA 121

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
             +    I      +VV+Y   I G  + G  +EA +L++QM   +  P+ +TY +++  
Sbjct: 122 SLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDG 181

Query: 542 FCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVN 588
           +CK+   +   +LLQ+++    E ++ T   L   + K      A N
Sbjct: 182 YCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFN 228


>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 144/596 (24%), Positives = 275/596 (46%), Gaps = 48/596 (8%)

Query: 54  HSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGR-----FETVRGIVG 108
           H TL + P+ + + S    C    D     + +DH+ISV +++        F ++  ++ 
Sbjct: 46  HHTLQDYPNSIPSYS---SCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALI- 101

Query: 109 ELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIG 168
                      ++F+   +  +   + G+++       + GF  N +  N+++    + G
Sbjct: 102 -----------ESFVNTQKPSFAFGVLGLIM-------KRGFHLNVYNFNLLLKGFCQSG 143

Query: 169 ----RVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFE 224
                +DL   + +   +P+ +S+N  +  LCK   +   K++   M      PN   F 
Sbjct: 144 DSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFS 203

Query: 225 ILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN 284
            L++ FCK G + E + LL  M  +G    V  ++ LI GF     ++    L+ +M++ 
Sbjct: 204 ALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRK 263

Query: 285 GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
             +PNVVTY+ L+    + + +  A   LD +      PD+V + VL D LSK G   DA
Sbjct: 264 NVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDA 323

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSY 401
           + V D +++    P++ T+ ++++ +C  GR      ++  +  +    D+V Y+ L+  
Sbjct: 324 IKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKG 383

Query: 402 FCKAGFPNQAVKLYNTMLDKGF--TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
            C  G  ++AV L N ++ K F   PD ++F  +++ LC  R++  A  VY  +V     
Sbjct: 384 LCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFP 443

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            N   +  ++D  + AG+  KA++L++ A+      +  +YTV I GL +      A  L
Sbjct: 444 SNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGL 503

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK 579
           +++ +     P    Y  ++ S C+E +++  + L Q++ +A  + D  +   +     K
Sbjct: 504 FNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLK 563

Query: 580 FHSSSSAVNQLVEMCNLGLIPDEM--------WRKLGLLSDETMTPVSLFDGFVPC 627
                SA   L+EM N+ L+PD +        + KLG L +      SL++  V C
Sbjct: 564 AGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDE----AASLYERMVSC 615



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 116/471 (24%), Positives = 202/471 (42%), Gaps = 44/471 (9%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNL 195
           E F EM      PN+   + ++D   K G V+ G  +L+E +      +   ++  +   
Sbjct: 185 ELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGF 244

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
           C   D+   K++   M+RK   PNV  +  L+N  CK  +  EA Q+L  M        V
Sbjct: 245 CSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDV 304

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
            A+TVL DG  +  R   A  + + MV+ G  PN VTY ++I G  +      A   L+ 
Sbjct: 305 VAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILET 364

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL--ELKLVPDSYTFCSLLSTVCLS 373
           +  +G  PD+V ++ L+  L  +G  D+A+D+ + L+  E  + PD + F  ++  +C  
Sbjct: 365 MAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQ 424

Query: 374 GR----------------------FSLL-------PKLVCGLEVEADLV---------VY 395
            R                      +++L        KL   LE+  D V          Y
Sbjct: 425 RRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATY 484

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
             L++  CK    + A  L+N     G  P    +  L+  LC    +++A N++Q +  
Sbjct: 485 TVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRN 544

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
            N   +      I+D  ++AG    A +L    +      D +++++ I   L+ G+ +E
Sbjct: 545 ANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDE 604

Query: 516 AYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           A  LY +M      P+A  +  +L  +  +   + V  +LQ + D  + LD
Sbjct: 605 AASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLD 655



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 104/452 (23%), Positives = 183/452 (40%), Gaps = 38/452 (8%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G  E  + +  E+ R        T+   +    + + +    +  D M      P+  A 
Sbjct: 248 GDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAY 307

Query: 158 NIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
            ++ D L K GR    IKVL    K  + PN +++N  +  LCK   V +   ++  M +
Sbjct: 308 TVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAK 367

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT--LGTSLSVNAWTVLIDGFRRLRRL 271
           KG  P+V  +  L+   C +G+I EA  LL L+++        V A+ ++I    + RRL
Sbjct: 368 KGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRL 427

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
             A  ++  MV+ G   N+VTY  LI G++ A   + A          G +P+   + VL
Sbjct: 428 RHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVL 487

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEAD 391
           I+ L KM      L +  GL   K    +    S                          
Sbjct: 488 INGLCKM----QMLSIAKGLFNKKRASGTRPTVS-------------------------- 517

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
              YN L++  C+     QA  L+  M +    PD  SF  ++ G   A  ++ A  +  
Sbjct: 518 --EYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLL 575

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
            ++  N   +    + +++R ++ G+  +A  L+ R +   +  D V +   ++G    G
Sbjct: 576 EMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKG 635

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           +TE+   +  QM    V  ++     +L   C
Sbjct: 636 KTEKVVSMLQQMADKDVVLDSKLTSTILACLC 667



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/282 (22%), Positives = 119/282 (42%), Gaps = 9/282 (3%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNV 204
           GF  N    NI++D     G++   +++ K+       PN  ++ + +  LCK+  +S  
Sbjct: 441 GFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIA 500

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
           K +       G  P V  +  L+   C+   + +A  L   M        V ++ ++IDG
Sbjct: 501 KGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDG 560

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
             +   ++ A  L  +M+     P+ +T++ LI  F++      A S  + + S GH PD
Sbjct: 561 TLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPD 620

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLP 380
            V  + L+   S  G  +  + +   + +  +V DS    ++L+ +C   +      +LP
Sbjct: 621 AVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACLCNMSKDVDIEKILP 680

Query: 381 KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
           K      V A +   N LL    K    N  + + NT +  G
Sbjct: 681 KFSQHTSVGASIKC-NELLMKLNKVHPDNANILVANTAMGTG 721


>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 680

 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 104/422 (24%), Positives = 196/422 (46%), Gaps = 8/422 (1%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+ +++ + L  +CK +      +V+  M  KG  PN+  + +++N  C+ GR+ +A ++
Sbjct: 185 PSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEI 244

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           L  + + G    + ++T ++ G    RR D    L+ +MV   C PN VT+  L++ F  
Sbjct: 245 LNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCR 304

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
             M   A   L  +   G  P+    N++I+ + K G  DDA D  + +      PD+ +
Sbjct: 305 GGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTIS 364

Query: 363 FCSLLSTVCLSGRFS----LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           + ++L  +C +GR+     LLP++V       + V +N  +   C+ G   QA+KL   M
Sbjct: 365 YTTVLRGLCRAGRWEHAKELLPEMV-RKNCPPNEVTFNTFICILCQKGLIEQAIKLIELM 423

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
            + G +    ++  L+ G C   ++D A+ ++  +       N   +T ++  L  A R 
Sbjct: 424 PEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEP---NTITYTTLLTGLCHAERL 480

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
             A +L    I +  PL+ V++ V +    + G  EEA  L +QM      PN  T+  +
Sbjct: 481 DAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTL 540

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGL 598
           L    K+ N +    LL  ++   + LD  T   +   + +   +  A+  L  + ++G+
Sbjct: 541 LDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGM 600

Query: 599 IP 600
            P
Sbjct: 601 RP 602



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 114/504 (22%), Positives = 219/504 (43%), Gaps = 45/504 (8%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           T      R     + + GC     T+ + L    +   +G  +   DEM   G TPN   
Sbjct: 165 TAEGSATRSPCSTMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVT 224

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N++++ + + GRVD   ++L         P+ +S+   L  LC      +VK +   MV
Sbjct: 225 YNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMV 284

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
            K   PN   F++L+  FC+ G +  A Q+L  M   G + +     ++I+   +  R+D
Sbjct: 285 DKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVD 344

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA----------------------------- 303
            A      M   GC+P+ ++YT++++G   A                             
Sbjct: 345 DAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFI 404

Query: 304 ------KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
                  +   A   ++++   G +  +V +N L+      G  D AL++++    L   
Sbjct: 405 CILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNN---LPCE 461

Query: 358 PDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKL 414
           P++ T+ +LL+ +C + R     +L+  +   +   + V +N L+S+FC+ GF  +A++L
Sbjct: 462 PNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMEL 521

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
            N M++ G TP+  +F  LL G+      +EA+ +  G+V    +++   ++++VD L  
Sbjct: 522 VNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSR 581

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
             R  +AIQ+            V  Y   +  L +   T++A   ++ M      PN  T
Sbjct: 582 EDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNEST 641

Query: 535 YRVMLLSFCKERNIKMVKRLLQDV 558
           Y +++     E  +K  + +L ++
Sbjct: 642 YIILIEGLAHEGLLKEARYVLSEL 665



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 107/424 (25%), Positives = 197/424 (46%), Gaps = 19/424 (4%)

Query: 89  MISVVTRLTG-----RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFD 143
           ++S  T L G     R++ V+ +  E+    CV    TF + +R + RG M    ++   
Sbjct: 257 IVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQ 316

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLN 199
           +M + G TPNT   NIV++ + K GRVD     L    +    P+ +S+   L  LC+  
Sbjct: 317 QMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAG 376

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
              + K+++  MVRK   PN   F   +   C+ G I +A +L+ LM   G S+ +  + 
Sbjct: 377 RWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYN 436

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
            L+ GF    R+D A  L+  +    C PN +TYT+L+ G   A+    A   L  +  +
Sbjct: 437 ALVHGFCVQGRVDSALELFNNL---PCEPNTITYTTLLTGLCHAERLDAAAELLAEMIQK 493

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
               + V  NVL+    + G  ++A+++ + ++E    P+  TF +LL  +         
Sbjct: 494 DCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEA 553

Query: 380 PKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
            +L+ GL    V  D + Y++++    +     +A+++ + + D G  P    +  +L  
Sbjct: 554 LELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFA 613

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA----IQLFRRAIVEK 492
           LC   + D+AI+ +  +V N    N   +  +++ L   G   +A     +L+ + ++ K
Sbjct: 614 LCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGVLSK 673

Query: 493 YPLD 496
             L+
Sbjct: 674 SLLE 677



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 90/361 (24%), Positives = 152/361 (42%), Gaps = 10/361 (2%)

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           M+  G   SV  +TVL++   +      A  + ++M   GC+PN+VTY  +I G      
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
              A   L+ L S G  PD+V +  ++  L     +DD   ++  +++ K VP+  TF  
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297

Query: 366 LLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
           L+   C  G      +++  +       +  + N +++  CK G  + A    N M   G
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 357

Query: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI 482
             PD  S+  +LRGLC A + + A  +   +V  N   N       +  L + G   +AI
Sbjct: 358 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAI 417

Query: 483 QLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
           +L          + +V+Y   + G    GR + A  L++   ++   PN  TY  +L   
Sbjct: 418 KLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFN---NLPCEPNTITYTTLLTGL 474

Query: 543 CKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK---FHSSSSAVNQLVEM-CNLGL 598
           C    +     LL ++I     L+  T   L  F  +      +   VNQ++E  C   L
Sbjct: 475 CHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNL 534

Query: 599 I 599
           I
Sbjct: 535 I 535



 Score = 46.2 bits (108), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 40/186 (21%), Positives = 72/186 (38%), Gaps = 35/186 (18%)

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
           +TML +G  P   ++  LL  +C +    EA+NV                   +D +   
Sbjct: 176 STMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNV-------------------LDEMRAK 216

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
           G C                 ++V+Y V I G+   GR ++A  + +++      P+  +Y
Sbjct: 217 G-CTP---------------NIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSY 260

Query: 536 RVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCN 595
             +L   C  R    VK L  +++D +   +  T   L +F  +      A+  L +M  
Sbjct: 261 TTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQ 320

Query: 596 LGLIPD 601
            G  P+
Sbjct: 321 HGCTPN 326


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 104/418 (24%), Positives = 210/418 (50%), Gaps = 15/418 (3%)

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCN 194
           ++ F +M +    P+    N ++  + K+ + D+ I + K+ ++     +  +FNI +  
Sbjct: 70  IDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINC 129

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
            C    VS    ++G M++ G+ P+      L+N FC+  R+++A  L+  M+ +G    
Sbjct: 130 FCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPD 189

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           + A+  +ID   + +R++ A   ++++ + G  PNVVTYT+L+ G   +  +S A   L 
Sbjct: 190 IVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLS 249

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            +  +   P+++ ++ L+D   K G   +A ++++ ++ + + PD  T+ SL++ +CL  
Sbjct: 250 DMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHD 309

Query: 375 R-------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           R       F L+    C     AD+V YN L++ FCKA      +KL+  M  +G   + 
Sbjct: 310 RIDEANQMFDLMVSKGC----LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
            ++  L++G   A  +D+A   +  +     + +   +  ++  L + G   KA+ +F  
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
               +  LD+V+YT  IRG+ + G+ EEA+ L+  +    + P+  TY  M+   C +
Sbjct: 426 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTK 483



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/408 (25%), Positives = 193/408 (47%), Gaps = 6/408 (1%)

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
           KLND     D+   MV+   +P++  F  LL+   K+ +      L   M  LG    + 
Sbjct: 65  KLNDAI---DLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
            + ++I+ F    ++ +A  +  KM++ G  P+ VT  SL+ GF      S A S +D +
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
              G+ PD+V +N +ID L K    +DA D +  +    + P+  T+ +L++ +C S R+
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 377 SLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
           S   +L+  +   ++  +++ Y+ALL  F K G   +A +L+  M+     PD  ++  L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           + GLC   +IDEA  ++  +V      +   +  +++   +A R    ++LFR       
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
             + V+Y   I+G  + G  ++A   +SQM    + P+ +TY ++L   C    ++    
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 421

Query: 554 LLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           + +D+    ++LD  T   + + + K      A +    +   GL PD
Sbjct: 422 IFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 469



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/364 (24%), Positives = 162/364 (44%), Gaps = 42/364 (11%)

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           I+G++ ++G      T    +  + R       +   D+M   G+ P+  A N ++D L 
Sbjct: 142 ILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLC 201

Query: 166 KIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
           K  RV+      KE +     PN +++   +  LC  +  S+   ++  M++K   PNV 
Sbjct: 202 KTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVI 261

Query: 222 MFEILLNCFCKMG-----------------------------------RIAEAYQLLGLM 246
            +  LL+ F K G                                   RI EA Q+  LM
Sbjct: 262 TYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM 321

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
           ++ G    V ++  LI+GF + +R++    L+ +M Q G   N VTY +LI+GF +A   
Sbjct: 322 VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDV 381

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
             A  F   ++  G +PD+  +N+L+  L   G  + AL +++ + + ++  D  T+ ++
Sbjct: 382 DKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTV 441

Query: 367 LSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           +  +C +G+      L C L ++    D+V Y  ++S  C  G  ++   LY  M  +G 
Sbjct: 442 IRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501

Query: 424 TPDN 427
             ++
Sbjct: 502 MKND 505



 Score = 44.3 bits (103), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 44/214 (20%), Positives = 95/214 (44%), Gaps = 13/214 (6%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV S++ +I+   +   R E    +  E+++ G V    T+   ++ +++        E 
Sbjct: 329 DVVSYNTLINGFCK-AKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP----NFLSFNIALCNLCK 197
           F +M  FG +P+ +  NI++  L   G ++  + + ++ Q      + +++   +  +CK
Sbjct: 388 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 447

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              V     +   +  KG  P++  +  +++  C  G + E   L   M   G  L  N 
Sbjct: 448 TGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG--LMKND 505

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVV 291
            T L DG      + ++  L +KM+  G +P+++
Sbjct: 506 CT-LSDG-----DITLSAELIKKMLSCGYAPSLL 533


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 119/496 (23%), Positives = 230/496 (46%), Gaps = 21/496 (4%)

Query: 85  SFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDE 144
            F  + SVV R T +++ V  +  ++   G      T  + +    R     +   A  +
Sbjct: 74  DFSRLFSVVAR-TKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGK 132

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLND 200
           + + G+ P+T   + +++ L   GRV    +L  ++++    P  ++ N  +  LC    
Sbjct: 133 IIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGK 192

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
           VS+   +I  MV  GF PN   +  +L   CK G+ A A +LL  M      L    +++
Sbjct: 193 VSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSI 252

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           +IDG  +   LD A  L+ +M   G   +++ YT+LI+GF  A  +      L  +    
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----- 375
             PD+V  + LIDC  K G   +A +++  +++  + PD+ T+ SL+   C   +     
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372

Query: 376 --FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
               L+    CG     ++  +N L++ +CKA   +  ++L+  M  +G   D  ++  L
Sbjct: 373 HMLDLMVSKGCG----PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTL 428

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           ++G C   K++ A  ++Q +V      +   +  ++D L + G   KA+++F +    K 
Sbjct: 429 IQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKM 488

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
            LD+  Y + I G+    + ++A+ L+  +    V P+  TY +M+   CK+ ++     
Sbjct: 489 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA-- 546

Query: 554 LLQDVIDARIELDYHT 569
              D++  ++E D H+
Sbjct: 547 ---DLLFRKMEEDGHS 559



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 115/432 (26%), Positives = 201/432 (46%), Gaps = 36/432 (8%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF----LSFNIALCNLCK 197
            D M   GF PN      V+ V+ K G+  L +++L++ +        + ++I +  LCK
Sbjct: 200 IDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCK 259

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              + N  ++   M  KGF  ++ ++  L+  FC  GR  +  +LL  MI    +  V A
Sbjct: 260 DGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA 319

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           ++ LID F +  +L  A  L ++M+Q G SP+ VTYTSLI GF +      A   LD++ 
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMV 379

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
           S+G  P++   N+LI+   K    DD L+++                     + L G   
Sbjct: 380 SKGCGPNIRTFNILINGYCKANLIDDGLELF-------------------RKMSLRG--- 417

Query: 378 LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
                     V AD V YN L+  FC+ G    A +L+  M+ +   PD  S+  LL GL
Sbjct: 418 ----------VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGL 467

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
           C   + ++A+ +++ I  +   ++  ++  I+  +  A +   A  LF    ++    DV
Sbjct: 468 CDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDV 527

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
            +Y + I GL + G   EA +L+ +M+     PN  TY +++ +   E +     +L+++
Sbjct: 528 KTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEE 587

Query: 558 VIDARIELDYHT 569
           +      +D  T
Sbjct: 588 IKRCGFSVDAST 599



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 107/474 (22%), Positives = 212/474 (44%), Gaps = 46/474 (9%)

Query: 170 VDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
           VDL  ++ +    P  + F+     + +      V D+   M  KG   N+    I++NC
Sbjct: 57  VDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINC 116

Query: 230 FCKM-----------------------------------GRIAEAYQLLGLMITLGTSLS 254
            C+                                    GR++EA +L+  M+ +G   +
Sbjct: 117 CCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPT 176

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           +     L++G     ++  A  L ++MV+ G  PN VTY  ++K   ++   ++A   L 
Sbjct: 177 LITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLR 236

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            +E      D V ++++ID L K GS D+A ++++ +       D   + +L+   C +G
Sbjct: 237 KMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAG 296

Query: 375 RFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
           R+    KL+  +   ++  D+V ++AL+  F K G   +A +L+  M+ +G +PD  ++ 
Sbjct: 297 RWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYT 356

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            L+ G C   ++D+A ++   +V      N      +++   +A      ++LFR+  + 
Sbjct: 357 SLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLR 416

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
               D V+Y   I+G  E G+ E A  L+ +M    V P+  +Y+++L   C     +  
Sbjct: 417 GVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKA 476

Query: 552 KRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEM-CNL---GLIPD 601
             + + +  +++ELD    I +   I     ++S V+   ++ C+L   G+ PD
Sbjct: 477 LEIFEKIEKSKMELD----IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPD 526



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 113/516 (21%), Positives = 209/516 (40%), Gaps = 66/516 (12%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           L G+      ++  +   G      T+   L++  +     + +E   +M       +  
Sbjct: 189 LNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAV 248

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKETQLPNFLS----FNIALCNLCKLNDVSNVKDVIGMM 211
             +I++D L K G +D    +  E ++  F +    +   +   C      +   ++  M
Sbjct: 249 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM 308

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
           +++   P+V  F  L++CF K G++ EA +L   MI  G S     +T LIDGF +  +L
Sbjct: 309 IKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQL 368

Query: 272 DMAGYLWEKMVQNGCSPNV-----------------------------------VTYTSL 296
           D A ++ + MV  GC PN+                                   VTY +L
Sbjct: 369 DKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTL 428

Query: 297 IKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
           I+GF E     +A      + S    PD+V + +L+D L   G  + AL++++ + + K+
Sbjct: 429 IQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKM 488

Query: 357 VPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVK 413
             D   +  ++  +C + +      L C L    V+ D+  YN ++   CK G  ++A  
Sbjct: 489 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADL 548

Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV---HTAIVD 470
           L+  M + G +P+  ++  L+R   G     ++  + + I     +V+A       + + 
Sbjct: 549 LFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLA 608

Query: 471 RLIEAGR---------------------CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
           R+++AG                       + A  LF+      Y  +VV+Y   I+GLL 
Sbjct: 609 RMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLN 668

Query: 510 GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
           G    +   +  QM      PNA T    +   CK+
Sbjct: 669 GNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQ 704



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 91/384 (23%), Positives = 174/384 (45%), Gaps = 30/384 (7%)

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           D A  L+++M ++   P ++ ++ L       K + +       +E +G A +L   +++
Sbjct: 54  DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV---CGLEV 388
           I+C  +      A      +++L   PD+ TF +L++ +CL GR S   +LV     +  
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
           +  L+  NAL++  C  G  + AV L + M++ GF P+  ++  +L+ +C + +   A+ 
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           + + +      ++A  ++ I+D L + G    A  LF    ++ +  D++ YT  IRG  
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
             GR ++   L   M    + P+   +  ++  F KE  ++  + L +++I   I  D  
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353

Query: 569 TSIRLTKFIFKFHSSSSAVNQLVEM-------------------CNLGLIPD--EMWRKL 607
           T   L     K +    A + L  M                   C   LI D  E++RK+
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413

Query: 608 ---GLLSDETMTPVSLFDGFVPCE 628
              G+++D T+T  +L  GF  CE
Sbjct: 414 SLRGVVAD-TVTYNTLIQGF--CE 434



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/269 (21%), Positives = 101/269 (37%), Gaps = 63/269 (23%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP----NFLSFNIALCNL 195
           E F EM      P+  +  I++D L   G  +  +++ ++ +      +   +NI +  +
Sbjct: 443 ELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGM 502

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
           C  + V +  D+   +  KG  P+V+ + I++   CK G ++EA  L   M   G S + 
Sbjct: 503 CNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNG 562

Query: 256 NAWTVL----------------IDGFRR----------------LRRLDMAGY------- 276
             + +L                I+  +R                L R+  AG+       
Sbjct: 563 CTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTF 622

Query: 277 --------------------LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
                               L++ M   G  PNVVTY ++IKG +   M S     LD +
Sbjct: 623 TTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQM 682

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDAL 345
              G  P+ V  +  I  L K   +  A+
Sbjct: 683 FERGCQPNAVTKSTFISGLCKQDLHGSAI 711



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/186 (22%), Positives = 74/186 (39%), Gaps = 19/186 (10%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFL----SFNIALCNLCK 197
           F +M   G +PN    NI++      G      K+++E +   F     +   AL  L +
Sbjct: 550 FRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLAR 609

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFC--KMGRIAEAYQLLGLMITLGTSLSV 255
                        M++ G  P+V  F  LL  FC  +   + +A  L   M  +G   +V
Sbjct: 610 -------------MLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNV 656

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
             +  +I G      +     + ++M + GC PN VT ++ I G  +  +   A   L  
Sbjct: 657 VTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRK 716

Query: 316 LESEGH 321
           +E++  
Sbjct: 717 MENDNE 722


>gi|413950073|gb|AFW82722.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 620

 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 109/420 (25%), Positives = 189/420 (45%), Gaps = 33/420 (7%)

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNL 195
           G   +  DEM R G  P+      ++ VL K+ R+D   +VL     P   S+N  +  L
Sbjct: 153 GAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMP-PVAASYNAIVLAL 211

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
           C+   +  V  V+  MV +G  PNV  +  +++ FCK G +  A  +L  M+  G + +V
Sbjct: 212 CREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNV 271

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
             +T L+ G     R+  A  +W  MV  G +P+ V+Y  LI+G         A S L+ 
Sbjct: 272 VTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNS 331

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
           +E  G  P++  ++ LID  SK G    A+ +++ +        S + C           
Sbjct: 332 MEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDM--------SRSGC----------- 372

Query: 376 FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
                        + ++VVY  ++  FCK    NQA  L + ML +   P+  +F  L+R
Sbjct: 373 -------------KPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIR 419

Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
            LC  R++  A+ V+  +  +    N   +  ++  L   G C  A+ +          L
Sbjct: 420 SLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIEL 479

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
            +V+Y   + GL +   + EA +   +M    + PNA+T+  ++ ++CKE  ++M   +L
Sbjct: 480 SLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWML 539



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 90/407 (22%), Positives = 169/407 (41%), Gaps = 37/407 (9%)

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           LC+ N V   + ++  M RKG  P+   +  +++  CK+ R+ EA ++L  M  +  S  
Sbjct: 146 LCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAAS-- 203

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
              +  ++    R  R+     +   MV  G  PNV+TYT+++  F +A    +A + L 
Sbjct: 204 ---YNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILA 260

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            +   G  P++V    L+  L   G   DALD++  ++     P +              
Sbjct: 261 RMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPST-------------- 306

Query: 375 RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
                             V YN L+   C  G    A  + N+M   G  P+  ++  L+
Sbjct: 307 ------------------VSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLI 348

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            G   A  +  AI+++  +  +    N  V+T +VD   +    ++A  L  + ++E  P
Sbjct: 349 DGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCP 408

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
            + V++   IR L +  R   A  ++ +M+     PN  TY  ++    +E N      +
Sbjct: 409 PNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHM 468

Query: 555 LQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           + ++    IEL   T   +   + +   S  A+  + +M   G+ P+
Sbjct: 469 VTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPN 515



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 91/400 (22%), Positives = 163/400 (40%), Gaps = 42/400 (10%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           R + V  +V ++   G      T+   +  + +     M       M   G TPN     
Sbjct: 216 RMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFT 275

Query: 159 IVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
            ++  LF  GRV    D+   ++ E   P+ +S+NI +  LC + D+     ++  M + 
Sbjct: 276 ALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQH 335

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           G +PNVR +  L++ F K G +  A  +   M   G   +V  +T ++D F +    + A
Sbjct: 336 GCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQA 395

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             L +KM+   C PN VT+ +LI+   + +    A      +   G  P+   +N LI  
Sbjct: 396 KSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHG 455

Query: 335 LSKMGSYDDALDVYDGL----LELKLV-------------------------------PD 359
           L + G+  DAL +   +    +EL LV                               P+
Sbjct: 456 LFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPN 515

Query: 360 SYTFCSLLSTVCLSGRFSLLPKLVCGLEV---EADLVVYNALLSYFCKAGFPNQAVKLYN 416
           ++TF +++   C  G   +   ++  + V     +++VY  L++  C       A+    
Sbjct: 516 AFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLL 575

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            ML +G  P+  ++  L+RG+       E  +  Q I MN
Sbjct: 576 KMLYEGIYPNTVTWNVLVRGVFRNLGCIEPSDFIQHITMN 615



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 60/277 (21%), Positives = 115/277 (41%), Gaps = 4/277 (1%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G  +    I+  + + GC    +T+   +  + +    G  +  +++M R G  PN    
Sbjct: 320 GDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVY 379

Query: 158 NIVMDVLFKI----GRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
             ++DV  K         L  K+L E   PN ++FN  + +LC    V     V   M R
Sbjct: 380 TNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRR 439

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G  PN R +  L++   + G   +A  ++  M + G  LS+  +  ++ G  + R    
Sbjct: 440 HGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSRE 499

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A     KM+  G  PN  T++++I  + +     +A   L  +       +++ + +L+ 
Sbjct: 500 AMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMA 559

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
            L       DA+     +L   + P++ T+  L+  V
Sbjct: 560 ELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGV 596


>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 806

 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 128/526 (24%), Positives = 237/526 (45%), Gaps = 21/526 (3%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG 173
           GC    + + L L       ++ M+   ++ M   G  PN F  N+++  L + G+VD  
Sbjct: 139 GCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGA 198

Query: 174 IKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
            K+L E       P+ +S+   + ++CKL DV   +++        F P V ++  L++ 
Sbjct: 199 CKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELA-----MKFEPVVPVYNALIHG 253

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
            CK  R  EA+ L+  M+  G   +V +++ +I     +  ++++  ++ +M   GC PN
Sbjct: 254 VCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPN 313

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
           V T+TSLIKGF        A    +++  EG +P++V +N LI  L   G+ D+A+ V++
Sbjct: 314 VQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWN 373

Query: 350 GLLELKLVPDSYTFCSLLSTVCLSGRF----SLLPKLV-CGLEVEADLVVYNALLSYFCK 404
            + +  + P+  T+ +++     SG          K++ CG     ++VVY  ++   C+
Sbjct: 374 QMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCG--CRPNVVVYTCMVDVLCQ 431

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV 464
               +QA  L + M+  G  P   +F   ++GLC A +++ A+NV   +       N   
Sbjct: 432 MSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRT 491

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
           +  ++D L  A    +A  L R     K   D V+Y   + G    G  ++   L  +M 
Sbjct: 492 YNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKML 551

Query: 525 HIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV-IDARIELDYHTSIRLTKFIFKFHSS 583
              +  +  T    + ++CK   +K   ++L ++  +     D  T   +   I  +  +
Sbjct: 552 VNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTIILWGICNWLGT 611

Query: 584 SSAVNQLVEMCNLGLIPD-EMWRKL--GLLSD-ETMTPVSLFDGFV 625
             AV  L EM   G+ P+   W  L  G  S    M P+ + D  +
Sbjct: 612 EEAVVYLHEMLKRGIFPNIATWNVLVRGFFSKLGHMGPIRILDDII 657



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 146/316 (46%), Gaps = 5/316 (1%)

Query: 232 KMGRIAE---AYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSP 288
           K+GR  E      LL  M       S   +  +I  +RR    +    ++ ++ + GC P
Sbjct: 83  KLGRNNEMDGVSYLLQQMKLENVPCSQELFQFVIKCYRRSNLGEQGLKMFYRIREFGCEP 142

Query: 289 NVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVY 348
           +V  Y  ++   +   +F +  +  + ++SEG  P++  +NVL+  L + G  D A  + 
Sbjct: 143 SVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLL 202

Query: 349 DGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFP 408
             +      PD  ++ +++S++C  G      +L   ++ E  + VYNAL+   CK    
Sbjct: 203 VEMSNKGCDPDDVSYTTVISSMCKLGDVDKAREL--AMKFEPVVPVYNALIHGVCKECRF 260

Query: 409 NQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAI 468
            +A  L N M+D+G  P+  S+  ++  L     ++ ++ V+  + +     N    T++
Sbjct: 261 KEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSL 320

Query: 469 VDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAV 528
           +      GR   A+ L+   I E    +VV+Y   I GL   G  +EA  +++QM+  ++
Sbjct: 321 IKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSI 380

Query: 529 PPNAYTYRVMLLSFCK 544
            PN  TY  ++  F K
Sbjct: 381 RPNVTTYSTIIYGFAK 396



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/364 (23%), Positives = 163/364 (44%), Gaps = 9/364 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           +V S+  +IS ++ + G  E    + G +   GC    QTF   ++ ++     G  +  
Sbjct: 278 NVISYSTVISCLSDM-GNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGL 336

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCK 197
           ++ M R G +PN  A N ++  L   G +D  I V     K++  PN  +++  +    K
Sbjct: 337 WNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAK 396

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
             D+ +  +    M+  G  PNV ++  +++  C+M    +A+ L+  MI+ G   +V  
Sbjct: 397 SGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVIT 456

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +   I G  R  R++ A  + ++M +  C PN+ TY  L+ G   A  F  A   +  LE
Sbjct: 457 FNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELE 516

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
                 D V +N ++   S  G +   L +   +L   +  D+ T  + ++  C  G+  
Sbjct: 517 ERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVK 576

Query: 378 LLPKLVCGLEVE----ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
              K++  +  E    AD++ +  +L   C      +AV   + ML +G  P+  ++  L
Sbjct: 577 TAIKVLDNISAEKEFRADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVL 636

Query: 434 LRGL 437
           +RG 
Sbjct: 637 VRGF 640


>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1114

 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 136/562 (24%), Positives = 246/562 (43%), Gaps = 57/562 (10%)

Query: 48  LAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIV 107
           L+   V   L++ P    + S+F   A   +  H  ++ ++M+  + R+ G+ E +  + 
Sbjct: 85  LSSSEVARVLMSFPDTDSSFSYFKSVAGNSNLVHTTETCNYMLEAL-RVDGKIEEMAYVF 143

Query: 108 GELARVGCVIKAQTFL-LFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK 166
             + +        T+L +F  +  +G +      A  +M  FGF  N ++ N ++ +L K
Sbjct: 144 DLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPF-ALRKMREFGFVLNAYSYNGLIHLLLK 202

Query: 167 IGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
                  ++V +   L    P+  +++  +  L K  D+ +V  ++  M   G  PNV  
Sbjct: 203 SRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYT 262

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           F I +    + G+I EAY++L  M   G    V  +TVLID     R+LD A  ++ KM 
Sbjct: 263 FTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMK 322

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY- 341
                P+ VTY +L+  F + +       F   +E +GH PD+V   +L+D L K G++ 
Sbjct: 323 TGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFG 382

Query: 342 ----------------------------------DDALDVYDGLLELKLVPDSYTFCSLL 367
                                             DDAL+++D +  L + P +YT+   +
Sbjct: 383 EAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFI 442

Query: 368 STVCLSGRFSLLPKLVCGLE---------VEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
                SG        V  LE         +  ++V  NA L    KAG   +A +++  +
Sbjct: 443 DYYGKSG------DSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGL 496

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
            D G  PD+ ++  +++      +IDEAI +   +V N    +  V  ++++ L +A R 
Sbjct: 497 KDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRV 556

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            +A ++F R    K    VV+Y   + GL + G+ +EA  L+  M     PPN  T+  +
Sbjct: 557 DEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTL 616

Query: 539 LLSFCKERNIKMVKRLLQDVID 560
               CK   + +  ++L  ++D
Sbjct: 617 FDCLCKNDEVTLALKMLFKMMD 638



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 115/497 (23%), Positives = 214/497 (43%), Gaps = 24/497 (4%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           ++ +++ +I  + R+  R +    I   +  +G    A T+++F+  Y +       LE 
Sbjct: 399 NLHTYNTLICGLLRVH-RLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALET 457

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV---LKETQL-PNFLSFNIALCNLCK 197
           F++M   G  PN  A N  +  L K GR     ++   LK+  L P+ +++N+ +    K
Sbjct: 458 FEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSK 517

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
           + ++     ++  MV     P+V +   L+N   K  R+ EA+++   M  +    +V  
Sbjct: 518 VGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVT 577

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  L+ G  +  ++  A  L+E MVQ GC PN +T+ +L     +    ++A   L  + 
Sbjct: 578 YNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMM 637

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G  PD+  +N +I  L K G   +A+  +  + +L + PD  T C+LL  V  +G   
Sbjct: 638 DMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKAGLIE 696

Query: 378 LLPKLVCGL-----EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS-FV 431
              K++        +  A+L   + + S   +AG  N AV     ++  G   D  S  V
Sbjct: 697 DAYKIIANFLYSCADQPANLFWEDLMGSILAEAGIDN-AVSFSERLVANGICRDGDSILV 755

Query: 432 GLLR------GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
            ++R         GAR + E      G+    P  N      ++  L+EA     A  +F
Sbjct: 756 PIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYN-----LLIGGLLEADMIEIAQDVF 810

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
            +        DV +Y   +    + G+ +E + +Y +M      PN  T+ +++    K 
Sbjct: 811 LQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKA 870

Query: 546 RNIKMVKRLLQDVIDAR 562
            N+     L  D++  R
Sbjct: 871 GNVDDALDLYYDLMSDR 887



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 112/479 (23%), Positives = 194/479 (40%), Gaps = 48/479 (10%)

Query: 138  VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALC 193
             +E F+ M + G  PNT   N + D L K   V L +K+L +      +P+  ++N  + 
Sbjct: 594  AIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIF 653

Query: 194  NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
             L K   V         M +K  YP+      LL    K G I +AY+++   +      
Sbjct: 654  GLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQ 712

Query: 254  SVNA-WTVLIDGFRRLRRLDMAGYLWEKMVQNG--------------------------- 285
              N  W  L+        +D A    E++V NG                           
Sbjct: 713  PANLFWEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARM 772

Query: 286  ----------CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
                        P + TY  LI G +EA M  IA      +++ G  PD+  +N L+D  
Sbjct: 773  LFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAY 832

Query: 336  SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEAD 391
             K G  D+  ++Y  +   +  P++ T   ++S +  +G       L   L+   +    
Sbjct: 833  GKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPT 892

Query: 392  LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
               Y  L+    K+G   +A +L+  M D G  P+   +  L+ G   A + D A  +++
Sbjct: 893  ACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFK 952

Query: 452  GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
             +V      +   ++ +VD L   GR  + +  FR         DVV Y + I GL +  
Sbjct: 953  RMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFH 1012

Query: 512  RTEEAYILYSQMKHI-AVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
            R EEA +L+++MK    + P+ YTY  ++L+      ++   ++  ++  A +E +  T
Sbjct: 1013 RLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFT 1071



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 95/371 (25%), Positives = 154/371 (41%), Gaps = 50/371 (13%)

Query: 113  VGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDL 172
            +G   K  T+ L +      +M  +  + F ++   G  P+    N ++D   K G++D 
Sbjct: 781  LGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDE 840

Query: 173  GIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVI-GMMVRKGFYPNVRMFEILL 227
              ++ KE       PN ++ NI +  L K  +V +  D+   +M  + F P         
Sbjct: 841  LFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTA------- 893

Query: 228  NCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCS 287
               C  G                          LIDG  +  RL  A  L+E M   GC 
Sbjct: 894  ---CTYGP-------------------------LIDGLSKSGRLYEAKQLFEGMSDYGCR 925

Query: 288  PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
            PN   Y  LI GF +A     A +    +  EG  PDL  ++VL+DCL  +G  D+ L  
Sbjct: 926  PNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHY 985

Query: 348  YDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVC-------GLEVEADLVVYNALLS 400
            +  L E  L PD   +  +++ +   G+F  L + +           +  DL  YN+L+ 
Sbjct: 986  FRELKESGLNPDVVCYNLIINGL---GKFHRLEEALVLFNEMKKSRGITPDLYTYNSLIL 1042

Query: 401  YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
                AG   +A K+YN +   G  P+ ++F  L+RG   + K + A  VYQ +V    + 
Sbjct: 1043 NLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSP 1102

Query: 461  NAHVHTAIVDR 471
            N   +  + +R
Sbjct: 1103 NTGTYEQLPNR 1113



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 102/492 (20%), Positives = 207/492 (42%), Gaps = 46/492 (9%)

Query: 97   TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
             G+ +    +   + + GC     TF        + +   + L+   +M   G  P+ F 
Sbjct: 588  NGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFT 647

Query: 157  RNIVMDVLFKIGRVDLGI---KVLKETQLPNFLSFNIALCNLCKLNDVSNV--------- 204
             N ++  L K G+V   +     +K+   P+F++    L  + K   + +          
Sbjct: 648  YNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLY 707

Query: 205  -----------KDVIGMMVRKGFYPNVRMFE--ILLNCFCKMG--------------RIA 237
                       +D++G ++ +    N   F   ++ N  C+ G                A
Sbjct: 708  SCADQPANLFWEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNA 767

Query: 238  EAYQLLGLMIT--LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
               ++L    T  LG    +  + +LI G      +++A  ++ ++   GC P+V TY  
Sbjct: 768  SGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNF 827

Query: 296  LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVY-DGLLEL 354
            L+  + ++      F     + +    P+ + HN++I  L K G+ DDALD+Y D + + 
Sbjct: 828  LLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDR 887

Query: 355  KLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQA 411
               P + T+  L+  +  SGR     +L  G+       +  +YN L++ F KAG  + A
Sbjct: 888  DFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAA 947

Query: 412  VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
              L+  M+ +G  PD  ++  L+  LC   ++DE ++ ++ +  +    +   +  I++ 
Sbjct: 948  CALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIING 1007

Query: 472  LIEAGRCHKAIQLFRRAIVEK-YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
            L +  R  +A+ LF      +    D+ +Y   I  L   G  EEA  +Y++++   + P
Sbjct: 1008 LGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEP 1067

Query: 531  NAYTYRVMLLSF 542
            N +T+  ++  +
Sbjct: 1068 NVFTFNALIRGY 1079


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/418 (24%), Positives = 210/418 (50%), Gaps = 15/418 (3%)

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCN 194
           ++ F +M +    P+    N ++  + K+ + D+ I + K+ ++     +  +FNI +  
Sbjct: 70  IDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINC 129

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
            C    VS    ++G M++ G+ P+      L+N FC+  R+++A  L+  M+ +G    
Sbjct: 130 FCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPD 189

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           + A+  +ID   + +R++ A   ++++ + G  PNVVTYT+L+ G   +  +S A   L 
Sbjct: 190 IVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLS 249

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            +  +   P+++ ++ L+D   K G   +A ++++ ++ + + PD  T+ SL++ +CL  
Sbjct: 250 DMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHD 309

Query: 375 R-------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           R       F L+    C     AD+V YN L++ FCKA      +KL+  M  +G   + 
Sbjct: 310 RIDEANQMFDLMVSKGC----LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
            ++  L++G   A  +D+A   +  +     + +   +  ++  L + G   KA+ +F  
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
               +  LD+V+YT  IRG+ + G+ EEA+ L+  +    + P+  TY  M+   C +
Sbjct: 426 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTK 483



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/408 (25%), Positives = 193/408 (47%), Gaps = 6/408 (1%)

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
           KLND     D+   MV+   +P++  F  LL+   K+ +      L   M  LG    + 
Sbjct: 65  KLNDAI---DLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
            + ++I+ F    ++ +A  +  KM++ G  P+ VT  SL+ GF      S A S +D +
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
              G+ PD+V +N +ID L K    +DA D +  +    + P+  T+ +L++ +C S R+
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 377 SLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
           S   +L+  +   ++  +++ Y+ALL  F K G   +A +L+  M+     PD  ++  L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           + GLC   +IDEA  ++  +V      +   +  +++   +A R    ++LFR       
Sbjct: 302 VNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
             + V+Y   I+G  + G  ++A   +SQM    + P+ +TY ++L   C    ++    
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 421

Query: 554 LLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           + +D+    ++LD  T   + + + K      A +    +   GL PD
Sbjct: 422 IFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 469



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/364 (24%), Positives = 162/364 (44%), Gaps = 42/364 (11%)

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           I+G++ ++G      T    +  + R       +   D+M   G+ P+  A N ++D L 
Sbjct: 142 ILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLC 201

Query: 166 KIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
           K  RV+      KE +     PN +++   +  LC  +  S+   ++  M++K   PNV 
Sbjct: 202 KTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVI 261

Query: 222 MFEILLNCFCKMG-----------------------------------RIAEAYQLLGLM 246
            +  LL+ F K G                                   RI EA Q+  LM
Sbjct: 262 TYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLM 321

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
           ++ G    V ++  LI+GF + +R++    L+ +M Q G   N VTY +LI+GF +A   
Sbjct: 322 VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDV 381

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
             A  F   ++  G +PD+  +N+L+  L   G  + AL +++ + + ++  D  T+ ++
Sbjct: 382 DKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTV 441

Query: 367 LSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           +  +C +G+      L C L ++    D+V Y  ++S  C  G  ++   LY  M  +G 
Sbjct: 442 IRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501

Query: 424 TPDN 427
             ++
Sbjct: 502 MKND 505



 Score = 44.7 bits (104), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 44/214 (20%), Positives = 95/214 (44%), Gaps = 13/214 (6%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV S++ +I+   +   R E    +  E+++ G V    T+   ++ +++        E 
Sbjct: 329 DVVSYNTLINGFCK-AKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP----NFLSFNIALCNLCK 197
           F +M  FG +P+ +  NI++  L   G ++  + + ++ Q      + +++   +  +CK
Sbjct: 388 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 447

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              V     +   +  KG  P++  +  +++  C  G + E   L   M   G  L  N 
Sbjct: 448 TGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG--LMKND 505

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVV 291
            T L DG      + ++  L +KM+  G +P+++
Sbjct: 506 CT-LSDG-----DITLSAELIKKMLSCGYAPSLL 533


>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 653

 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 127/490 (25%), Positives = 224/490 (45%), Gaps = 21/490 (4%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMG-RFGFTPNTF 155
           +  F ++  ++  +     V   ++F +  + Y +  +    +E F  M   F   P   
Sbjct: 85  SSDFNSLEKVLNRMRLENRVFSEKSFFVMFKAYGKAHLPNKAIELFYRMSFEFYCKPTVK 144

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKETQ-------LPNFLSFNIALCNLCKLNDVSNVKDVI 208
           + N V++V+ + G  D  ++             LPN LSFN+ + ++CKL  V N  ++ 
Sbjct: 145 SFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSFNLIIKSMCKLGLVDNAIELF 204

Query: 209 GMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRL 268
             M  +   P+   +  L++  CK+ RI EA  LL  M   G   S   + VLI+G  + 
Sbjct: 205 REMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLCKK 264

Query: 269 RRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH 328
                   L + M   GC PN VTY +LI G         A S LD + S    P+ V +
Sbjct: 265 GDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTY 324

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV----- 383
             +I+ L K G   D   V   + E   + + Y +  L+S +   G+     +L      
Sbjct: 325 GTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMD 384

Query: 384 --CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
             C L    + V+Y+AL+   C+   P++A+K+ + M DKG  P+ ++F  L++G     
Sbjct: 385 KGCKL----NTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVG 440

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYT 501
              +AI V++ +   N A N   ++ ++  L + G+  +A+ ++ + +      DVV+Y+
Sbjct: 441 NSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYS 500

Query: 502 VAIRGLLEGGRTEEAYILYSQMKHIA--VPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
             I+GL + G  EEA  LY++M  +     P+  TY ++  + CK+ +I     LL  ++
Sbjct: 501 SMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQSSISRAVDLLNSML 560

Query: 560 DARIELDYHT 569
           D   + D  T
Sbjct: 561 DRGCDPDLVT 570



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/324 (22%), Positives = 153/324 (47%), Gaps = 6/324 (1%)

Query: 286 CSPNVVTYTSLIKGFMEAKMFSIAFSFLDML---ESEGHAPDLVFHNVLIDCLSKMGSYD 342
           C P V ++ S++   ++A     A  F + +   +     P+++  N++I  + K+G  D
Sbjct: 139 CKPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSFNLIIKSMCKLGLVD 198

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALL 399
           +A++++  +   K VPD+YT+C+L+  +C   R      L+  +++E        +N L+
Sbjct: 199 NAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLI 258

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
           +  CK G   +  KL + M  KG  P+  ++  L+ GLC   K+D+A+++   +V +   
Sbjct: 259 NGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCV 318

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            N   +  I++ L++ GR     ++        Y ++   Y+V + GL + G++EEA  L
Sbjct: 319 PNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRL 378

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK 579
           + +        N   Y  ++   C++R      ++L ++ D     +  T   L K  F+
Sbjct: 379 FKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFE 438

Query: 580 FHSSSSAVNQLVEMCNLGLIPDEM 603
             +S  A+    +M  +    +E+
Sbjct: 439 VGNSHKAIEVWKDMTKINCAENEV 462


>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
 gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
          Length = 801

 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 133/515 (25%), Positives = 222/515 (43%), Gaps = 45/515 (8%)

Query: 63  DLIALSFFIWCAKQRDYFHDVQSFDH----------MISVVTRLTGRFET-----VRGIV 107
           D +  +  I    +  YF +  SF H          +++  T L+G  +       + I+
Sbjct: 106 DTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRII 165

Query: 108 GELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVM------ 161
             +   GC      F   +  Y   + Y    +  + M   G  P     NI +      
Sbjct: 166 NMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQ 225

Query: 162 DVLFKIGRVDLGIKVLKETQLPNFLSFNIALCN----LCKLNDVSNVKDVIGMMVRKGFY 217
           + L     +DL  K+  E    N +   + + N    LC +        +I  M+RKGF 
Sbjct: 226 EKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFV 285

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
           P+   +  ++   C   ++ +A+ L   M  +G +  V  +T+LID F +   ++ A +L
Sbjct: 286 PDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWL 345

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
           +E+M   GCSP VVTYT+LI  +++AK    A      +   G  P+ V +  L+D L K
Sbjct: 346 FEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCK 405

Query: 338 MGSYDDALDVYDGLLELKLVPDS--YTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVY 395
            G+   A +VY  L+      DS  Y  C          R +L P          ++V Y
Sbjct: 406 AGNISKAFEVYAKLIGTSDSADSDFYFPC--------EDRHTLAP----------NVVTY 447

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
            AL+   CKA   + A +L + ML  G  P++  +  L+ G C A KID A  V+  +  
Sbjct: 448 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 507

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
                + H +T+++DR+ + GR   A+++  + + +    +VV+YT  I GL   G +E+
Sbjct: 508 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEK 567

Query: 516 AYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
           A  L S M+     PN  TY  ++    K   I +
Sbjct: 568 ALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDL 602



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 112/461 (24%), Positives = 201/461 (43%), Gaps = 59/461 (12%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV ++  +I    +  G  E  + +  E+  VGC     T+   +  Y + +      + 
Sbjct: 322 DVYTYTILIDSFCK-AGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDI 380

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL--------------------KETQ 181
           F  M   G  PN      ++D L K G +    +V                     + T 
Sbjct: 381 FHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTL 440

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
            PN +++   +  LCK + V +  +++  M+  G  PN  +++ L++ FCK G+I  A +
Sbjct: 441 APNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQE 500

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           +   M   G   SV+ +T LID   +  RLD+A  +  +M+++ C+PNVVTYT++I G  
Sbjct: 501 VFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLC 560

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
                  A   L ++E +G +P++V +  LID L K G  D +LD++  +      P+  
Sbjct: 561 RIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYV 620

Query: 362 TFCSLLSTVCLSG------------RFSLLPKLVCGL-------------------EVEA 390
           T+  L++ +C +G            + +  PK + G                    E+E+
Sbjct: 621 TYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMES 680

Query: 391 D-----LVVYNALLSYFCKAGFPNQAVKLYNTMLD--KGFTPDNYSFVGLLRGLCGARKI 443
                   VY  L+  F KAG    A++L+  M++       DN  +  L++ LC A ++
Sbjct: 681 YGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQV 740

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           +EA  +Y  +          V   ++  L+E  +  +A+QL
Sbjct: 741 EEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 781



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 113/524 (21%), Positives = 205/524 (39%), Gaps = 63/524 (12%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFL--SFNIALCNLCK 197
           ++ D +  FG+ P+    N ++ VL   G+VDLG +V KE     F    F +  C    
Sbjct: 26  DSEDPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVG-CFAHA 84

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
           L       D + M+ R+ F  +  +   +++   +     EA   L  M       +V  
Sbjct: 85  LCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVT 144

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  L+ GF + ++L     +   M+  GC+PN   + SL+  +   K ++ A+  L+ + 
Sbjct: 145 YRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMT 204

Query: 318 SEGHAPDLVFHNVLID-----------------------------------------CLS 336
           + G  P  V +N+ I                                          CL 
Sbjct: 205 TCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLC 264

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLV 393
            +G +D A  +   ++    VPD+ T+  +++ +C + +     LL + +  + V  D+ 
Sbjct: 265 GVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVY 324

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            Y  L+  FCKAG   QA  L+  M   G +P   ++  L+     A+++ +A +++  +
Sbjct: 325 TYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRM 384

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD----------------V 497
           V      N   + A+VD L +AG   KA +++ + I      D                V
Sbjct: 385 VDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNV 444

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
           V+Y   + GL +  + + A+ L   M      PN   Y  ++  FCK   I   + +   
Sbjct: 445 VTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQ 504

Query: 558 VIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           +         HT   L   +FK      A+  L +M      P+
Sbjct: 505 MTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPN 548



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 108/484 (22%), Positives = 194/484 (40%), Gaps = 68/484 (14%)

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIA 191
           G   +A D + R  F  +T     ++  L +    D  +  L   +    +PN +++   
Sbjct: 89  GRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTL 148

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           L    K   +   K +I MM+ +G  PN  +F  L++ +C     A AY+LL  M T G 
Sbjct: 149 LSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGC 208

Query: 252 SLSVNAWTVLID---GFRRLRR---LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
                 + + I    G  +L     LD+A  ++ +M+   C  N V   +  +       
Sbjct: 209 PPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGK 268

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
           F  AF  +  +  +G  PD   ++ +I  L      + A  ++  +  + + PD YT+  
Sbjct: 269 FDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTI 328

Query: 366 LLSTVCLSGR-------FSLLPKLVCGLEV------------------------------ 388
           L+ + C +G        F  +  + C   V                              
Sbjct: 329 LIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAG 388

Query: 389 -EADLVVYNALLSYFCKAGFPNQAVKLYNTML------DKGF----------TPDNYSFV 431
              + V Y AL+   CKAG  ++A ++Y  ++      D  F           P+  ++ 
Sbjct: 389 CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYG 448

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            L+ GLC A K+D A  +   ++ +    N  V+ A++D   +AG+   A ++F +    
Sbjct: 449 ALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKC 508

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK----ERN 547
            Y   V +YT  I  + + GR + A  + SQM   +  PN  TY  M+   C+    E+ 
Sbjct: 509 GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKA 568

Query: 548 IKMV 551
           +K++
Sbjct: 569 LKLL 572


>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
 gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 127/515 (24%), Positives = 238/515 (46%), Gaps = 48/515 (9%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFL 186
           R + + + +E  DEM   G+ P+  A + +++ L K+G ++   ++L +      +PN  
Sbjct: 307 RIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLF 366

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
            +N  + +LCK   +   + +  +M  +G  PN   + IL++ F +  ++  A+     M
Sbjct: 367 VYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKM 426

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
           I  G S +V ++  +I+   +  ++ MA  L+++MV  G  P V TYTSLI G+ +  + 
Sbjct: 427 IECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLV 486

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
             AF     +  +G AP+ V    LI  L ++    +A  ++D ++ELK++P+  T+  L
Sbjct: 487 PKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVL 546

Query: 367 LSTVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
           +   C  G     F LL +++    +  D   Y  L++  C  G  ++A +  N +  K 
Sbjct: 547 IEGHCREGNTTRAFELLDEMI-KKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKH 605

Query: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQ-----GIVMN--------NPAVNAH------ 463
              D   +  LL+G C   +I EA+   Q     G+ M+        + A+N +      
Sbjct: 606 QRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFE 665

Query: 464 ---------------VHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
                          ++T ++D  I++G   KA + +   I E Y  + V+YT  + GL 
Sbjct: 666 LLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLF 725

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE--LD 566
           + G   EA +L+ +M      PN  TY   L    KE N++   +L   ++       + 
Sbjct: 726 KAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSFANTVT 785

Query: 567 YHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           Y+  IR    I KF  ++  ++ ++    +G++PD
Sbjct: 786 YNILIRGYCQIGKFQEAAKLLDVMI---GIGMVPD 817



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 118/513 (23%), Positives = 220/513 (42%), Gaps = 24/513 (4%)

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           +V  +   G + + +T    L    R   +  VLE FD +   G  P+ +   +V+  L 
Sbjct: 177 VVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLC 236

Query: 166 KIGRVDLGIKVLKETQLP----NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
           ++   +   +++ + +      + +++N+ +  LCK   V    +V   +  KG   ++ 
Sbjct: 237 ELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLV 296

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            +  L+   C++       +++  MI LG   S  A + LI+G  ++  ++ A  L  K+
Sbjct: 297 TYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKV 356

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
            + G  PN+  Y S+I    +      A     ++   G  P+ V + +LID   +    
Sbjct: 357 GKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKL 416

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF---SLLPKLVCGLEVEADLVVYNAL 398
           D A   ++ ++E  +    Y++ S+++  C  G+     LL K +    ++  +  Y +L
Sbjct: 417 DVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSL 476

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           +S +CK G   +A KLY+ M  KG  P+  +F  L+ GLC   K+ EA  ++  +V    
Sbjct: 477 ISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKI 536

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
             N   +  +++     G   +A +L    I +    D  +Y   I GL   GR  EA  
Sbjct: 537 LPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKE 596

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
             + + H     +   Y  +L  FCKE  IK      Q+++   +++D  +   L     
Sbjct: 597 FINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLI---- 652

Query: 579 KFHSSSSAVNQ--------LVEMCNLGLIPDEM 603
                S A+NQ        L EM   G+ PD +
Sbjct: 653 -----SGALNQNDRILFELLREMHGKGMQPDNV 680



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 111/470 (23%), Positives = 211/470 (44%), Gaps = 10/470 (2%)

Query: 86  FDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEM 145
           ++ MI+ + + TG+ E    +   +A  G      T+ + +  + R     +    F++M
Sbjct: 368 YNSMINSLCK-TGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKM 426

Query: 146 GRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDV 201
              G +   ++ N +++   K G++ +   + KE       P   ++   +   CK   V
Sbjct: 427 IECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLV 486

Query: 202 SNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVL 261
                +   M  KG  PN   F  L+   C++ ++AEA +L   M+ L    +   + VL
Sbjct: 487 PKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVL 546

Query: 262 IDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH 321
           I+G  R      A  L ++M++ G SP+  TY  LI G       S A  F++ L  +  
Sbjct: 547 IEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQ 606

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR---FSL 378
             D + +  L+    K G   +AL     ++   L  D  ++  L+S          F L
Sbjct: 607 RLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFEL 666

Query: 379 LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
           L ++  G  ++ D V+Y  L+  F K+G   +A + +  M+ +G+ P++ ++  L+ GL 
Sbjct: 667 LREMH-GKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLF 725

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
            A  ++EA  +++ +++     N   +   +D L + G    A+QL   A+++    + V
Sbjct: 726 KAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQL-HNAMLQGSFANTV 784

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
           +Y + IRG  + G+ +EA  L   M  I + P+  TY   +  +CK  N+
Sbjct: 785 TYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNV 834



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/418 (22%), Positives = 183/418 (43%), Gaps = 40/418 (9%)

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           F++L+  + +  R+ +   ++ LM   G    V   + L++   R+R+      L++ +V
Sbjct: 158 FDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLV 217

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
             G  P+   YT ++K   E K F+ A   ++  E  G +  +V +NV I+ L K     
Sbjct: 218 NAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVW 277

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVC------------------------------- 371
           +A++V   L E  L  D  T+C+L+  +C                               
Sbjct: 278 EAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLI 337

Query: 372 --------LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
                   + G F LL K V  L V  +L VYN++++  CK G   +A  L++ M ++G 
Sbjct: 338 EGLIKMGSIEGAFELLNK-VGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGL 396

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
            P++ ++  L+ G     K+D A   +  ++    +   + + ++++   + G+   A  
Sbjct: 397 NPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAEL 456

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           LF+  + +     V +YT  I G  + G   +A+ LY +M    + PN  T+  ++   C
Sbjct: 457 LFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLC 516

Query: 544 KERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           +   +    +L  ++++ +I  +  T   L +   +  +++ A   L EM   GL PD
Sbjct: 517 QINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPD 574



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 101/478 (21%), Positives = 204/478 (42%), Gaps = 12/478 (2%)

Query: 83  VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF 142
           V S++ MI+   +  G+ +    +  E+   G      T+   +  Y +  +     + +
Sbjct: 435 VYSYNSMINCQCKF-GKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLY 493

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKL 198
            EM   G  PNT     ++  L +I ++    K+  E      LPN +++N+ +   C+ 
Sbjct: 494 HEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCRE 553

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
            + +   +++  M++KG  P+   +  L+   C  GR++EA + +  +      L    +
Sbjct: 554 GNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCY 613

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
           T L+ GF +  R+  A    ++MV  G   ++V+Y  LI G +      I F  L  +  
Sbjct: 614 TALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQND-RILFELLREMHG 672

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS- 377
           +G  PD V + +LID   K G+   A + +  ++    VP+S T+ +L++ +  +G  + 
Sbjct: 673 KGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNE 732

Query: 378 ---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
              L  +++ G E   + + Y   L +  K G    A++L+N ML   F  +  ++  L+
Sbjct: 733 AKLLFKRMLVG-EAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSFA-NTVTYNILI 790

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
           RG C   K  EA  +   ++      +   ++  +    + G    A+ ++   +     
Sbjct: 791 RGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLK 850

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVK 552
            D V +   I      G  + A  L + M    + P   TY  +++   +   +  V+
Sbjct: 851 PDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARLTQVQ 908


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 160/652 (24%), Positives = 285/652 (43%), Gaps = 77/652 (11%)

Query: 48  LAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMIS--VVTRLTGRFETVRG 105
           L PH V + L    +    L FF W ++   + HD+  F  M++  V  RL    + VR 
Sbjct: 76  LKPHHVVNLLDTHNNTESVLRFFHWVSRTHFFKHDMSCFVSMLNRLVRDRLFVPADNVRI 135

Query: 106 IV-------GELARVGCVIKA-----------QTFLLFLRIYWRGEMYGMVLEAFDEMGR 147
           ++       GE+ RV  V+              +F   L    + +M G+  + + EM  
Sbjct: 136 LMIKSCRNEGEVKRVIQVLSEINTTYDFGYTLYSFSTLLIQLGKFDMDGLGRDVYIEMLN 195

Query: 148 FGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET----QLPNFLSFNIALCNLCKLNDVSN 203
            G  PN F  N ++ +L   G+V     ++         P+  ++   +   CK  ++  
Sbjct: 196 SGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDL 255

Query: 204 VKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLID 263
             ++   MV+ G  PN   +  L+N  C  GR+ EA  +L  MI  G   +V+A+T+ I 
Sbjct: 256 AFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIV 315

Query: 264 GFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP 323
                 R   A  L  KM + GC PNV TYT+LI G      F +A      + ++G  P
Sbjct: 316 SLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVP 375

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG---RFSLLP 380
             V ++ LI+ L   G ++ AL +++ +L    +P++ T+  ++   C  G   + + + 
Sbjct: 376 TAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIF 435

Query: 381 KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
             +       +++ YN ++  + K G+ N A++L   M   G   D +++  L+ G    
Sbjct: 436 DQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRG 495

Query: 441 RKIDEAINVYQ---------GIVMNNPAVNAHVHTAIVD-------RLIEAG-------- 476
            K++ A +++           +V  N  +N ++  A VD       +++E+G        
Sbjct: 496 GKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTY 555

Query: 477 -----------RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKH 525
                      R  +A     + + +    +V++YT  I GL + GRT  A+ ++ +MK 
Sbjct: 556 NMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKK 615

Query: 526 IAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSS 585
               PN  TY  ++   C+E   +  +RLL D  +  ++  Y T +R      + + +  
Sbjct: 616 RDYFPNLCTYSSLIDGLCQEGQAEDAERLLDDGCEPNVD-TYTTLVRGLCGKGRCYEA-- 672

Query: 586 AVNQLVE-MCNLGLIP-DEMWRKL--GLLSD-ETMTPVSLFD-----GFVPC 627
             +QLVE M   GL P +E++R L  G   + E  + + +FD     GF PC
Sbjct: 673 --DQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPC 722



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 120/526 (22%), Positives = 240/526 (45%), Gaps = 20/526 (3%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR      ++G++ + GC    QT+   +    R   + + +  + +M   G  P     
Sbjct: 321 GRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTY 380

Query: 158 NIVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           + +++ L+  GR +  + +    L    LPN  ++N+ +   C +  +     +   M++
Sbjct: 381 SALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLK 440

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV--LIDGFRRLRRL 271
            G  PNV  + I+++ + K G +  A +LL +M   G  L ++ WT   LI GF R  +L
Sbjct: 441 AGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMM--KGNGLKLDTWTYANLISGFSRGGKL 498

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS-FLDMLESEGHAPDLVFHNV 330
           + A  L+ +MV++G SPNVVTY ++I G++       A + F  M+ES G+ P    +N+
Sbjct: 499 EHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVES-GNVPSSGTYNM 557

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE- 389
           +I   SK     +A +    +++  L+P+  T+ S +  +C +GR SL  K+   ++   
Sbjct: 558 MISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRD 617

Query: 390 --ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
              +L  Y++L+   C+ G    A +L    LD G  P+  ++  L+RGLCG  +  EA 
Sbjct: 618 YFPNLCTYSSLIDGLCQEGQAEDAERL----LDDGCEPNVDTYTTLVRGLCGKGRCYEAD 673

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            + + +       +  ++ A++    +      A+++F   +   +   +  Y   I  L
Sbjct: 674 QLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICAL 733

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
            +    ++A  ++  M       +   + V+L    KE    +   LL  +      L++
Sbjct: 734 CKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNCTLNF 793

Query: 568 HTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDE 613
            T + L + +      S  + Q+ +   LG++ ++  +   +L D+
Sbjct: 794 QTRVMLARELSAL-GCSIEIPQISK--QLGIVKEKQKQTADVLRDD 836



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/253 (19%), Positives = 108/253 (42%), Gaps = 2/253 (0%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
           AL+ F W   +        +++ MIS  ++ T R        G++ + G +    T+  F
Sbjct: 536 ALALF-WKMVESGNVPSSGTYNMMISGFSK-TNRISEAENFCGKMVKQGLLPNVITYTSF 593

Query: 126 LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF 185
           +    +     +  + F EM +  + PN    + ++D L + G+ +   ++L +   PN 
Sbjct: 594 IDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDDGCEPNV 653

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGL 245
            ++   +  LC          ++  M +KG  P+  ++  LL   CK   +  A ++   
Sbjct: 654 DTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDS 713

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           M+T G    ++ +  LI    +      A  +++ M++   + + V +T L+ G ++   
Sbjct: 714 MVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGE 773

Query: 306 FSIAFSFLDMLES 318
             ++   L ++ES
Sbjct: 774 TDLSLELLHVMES 786


>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
          Length = 736

 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 131/502 (26%), Positives = 218/502 (43%), Gaps = 45/502 (8%)

Query: 76  QRDYFHDVQSFDH----------MISVVTRLTGRFET-----VRGIVGELARVGCVIKAQ 120
           +  YF +  SF H          +++  T L+G  +       + I+  +   GC     
Sbjct: 54  EASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPS 113

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVM------DVLFKIGRVDLGI 174
            F   +  Y   + Y    +  + M   G  P     NI +      + L     +DL  
Sbjct: 114 LFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAE 173

Query: 175 KVLKETQLPNFLSFNIALCN----LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCF 230
           K+  E    N +   + + N    LC +        +I  M+RKGF P+   +  ++   
Sbjct: 174 KIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFL 233

Query: 231 CKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNV 290
           C   ++ +A+ L   M  +G +  V  +T+LID F +   ++ A +L+E+M   GCSP V
Sbjct: 234 CHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTV 293

Query: 291 VTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDG 350
           VTYT+LI  +++AK    A      +   G  P+ V +  L+D L K G+   A +VY  
Sbjct: 294 VTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAK 353

Query: 351 LLELKLVPDS--YTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFP 408
           L+      DS  Y  C          R +L P          ++V Y AL+   CKA   
Sbjct: 354 LIGTSDSADSDFYFPC--------EDRHTLAP----------NVVTYGALVDGLCKAHKV 395

Query: 409 NQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAI 468
           + A +L + ML  G  P++  +  L+ G C A KID A  V+  +       + H +T++
Sbjct: 396 DHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSL 455

Query: 469 VDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAV 528
           +DR+ + GR   A+++  + + +    +VV+YT  I GL   G +E+A  L S M+    
Sbjct: 456 IDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGC 515

Query: 529 PPNAYTYRVMLLSFCKERNIKM 550
            PN  TY  ++    K   I +
Sbjct: 516 SPNVVTYTALIDGLGKAGKIDL 537



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 112/461 (24%), Positives = 201/461 (43%), Gaps = 59/461 (12%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV ++  +I    +  G  E  + +  E+  VGC     T+   +  Y + +      + 
Sbjct: 257 DVYTYTILIDSFCK-AGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDI 315

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL--------------------KETQ 181
           F  M   G  PN      ++D L K G +    +V                     + T 
Sbjct: 316 FHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTL 375

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
            PN +++   +  LCK + V +  +++  M+  G  PN  +++ L++ FCK G+I  A +
Sbjct: 376 APNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQE 435

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           +   M   G   SV+ +T LID   +  RLD+A  +  +M+++ C+PNVVTYT++I G  
Sbjct: 436 VFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLC 495

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
                  A   L ++E +G +P++V +  LID L K G  D +LD++  +      P+  
Sbjct: 496 RIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYV 555

Query: 362 TFCSLLSTVCLSG------------RFSLLPKLVCGL-------------------EVEA 390
           T+  L++ +C +G            + +  PK + G                    E+E+
Sbjct: 556 TYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMES 615

Query: 391 D-----LVVYNALLSYFCKAGFPNQAVKLYNTMLD--KGFTPDNYSFVGLLRGLCGARKI 443
                   VY  L+  F KAG    A++L+  M++       DN  +  L++ LC A ++
Sbjct: 616 YGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQV 675

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           +EA  +Y  +          V   ++  L+E  +  +A+QL
Sbjct: 676 EEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 716



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 108/484 (22%), Positives = 194/484 (40%), Gaps = 68/484 (14%)

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIA 191
           G   +A D + R  F  +T     ++  L +    D  +  L   +    +PN +++   
Sbjct: 24  GRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTL 83

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           L    K   +   K +I MM+ +G  PN  +F  L++ +C     A AY+LL  M T G 
Sbjct: 84  LSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGC 143

Query: 252 SLSVNAWTVLID---GFRRLRR---LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
                 + + I    G  +L     LD+A  ++ +M+   C  N V   +  +       
Sbjct: 144 PPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGK 203

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
           F  AF  +  +  +G  PD   ++ +I  L      + A  ++  +  + + PD YT+  
Sbjct: 204 FDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTI 263

Query: 366 LLSTVCLSGR-------FSLLPKLVCGLEV------------------------------ 388
           L+ + C +G        F  +  + C   V                              
Sbjct: 264 LIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAG 323

Query: 389 -EADLVVYNALLSYFCKAGFPNQAVKLYNTML------DKGF----------TPDNYSFV 431
              + V Y AL+   CKAG  ++A ++Y  ++      D  F           P+  ++ 
Sbjct: 324 CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYG 383

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            L+ GLC A K+D A  +   ++ +    N  V+ A++D   +AG+   A ++F +    
Sbjct: 384 ALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKC 443

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK----ERN 547
            Y   V +YT  I  + + GR + A  + SQM   +  PN  TY  M+   C+    E+ 
Sbjct: 444 GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKA 503

Query: 548 IKMV 551
           +K++
Sbjct: 504 LKLL 507



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/410 (22%), Positives = 169/410 (41%), Gaps = 27/410 (6%)

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
           PNV  +  LL+ F K  ++    +++ +M+T G + + + +  L+  +   +    A  L
Sbjct: 75  PNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKL 134

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE---SEGHAPDLVFHNVLID- 333
             +M   GC P  V Y   I      +    +   LD+ E    E  A + V + V +  
Sbjct: 135 LNRMTTCGCPPGYVVYNIFIGSICGQEKLP-SPDLLDLAEKIYGEMLAANCVLNKVNVAN 193

Query: 334 ---CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLE 387
              CL  +G +D A  +   ++    VPD+ T+  +++ +C + +     LL + +  + 
Sbjct: 194 FARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVG 253

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
           V  D+  Y  L+  FCKAG   QA  L+  M   G +P   ++  L+     A+++ +A 
Sbjct: 254 VTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQAN 313

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD----------- 496
           +++  +V      N   + A+VD L +AG   KA +++ + I      D           
Sbjct: 314 DIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRH 373

Query: 497 -----VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
                VV+Y   + GL +  + + A+ L   M      PN   Y  ++  FCK   I   
Sbjct: 374 TLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSA 433

Query: 552 KRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           + +   +         HT   L   +FK      A+  L +M      P+
Sbjct: 434 QEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPN 483



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 94/433 (21%), Positives = 165/433 (38%), Gaps = 48/433 (11%)

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M   GF  +        +  CK GR A+A   L ++      L     T +I G      
Sbjct: 1   MSESGFCMDRFTVGCFAHALCKEGRWADA---LDMIEREDFKLDTVLCTHMISGLMEASY 57

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
            D A     +M  N C PNVVTY +L+ GF++ K        ++M+ +EG  P+    N 
Sbjct: 58  FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNS 117

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA 390
           L+        Y  A  + + +      P    +   + ++C   +   LP          
Sbjct: 118 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEK---LP--------SP 166

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           DL+               + A K+Y  ML      +  +     R LCG  K D+A  + 
Sbjct: 167 DLL---------------DLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLI 211

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
           + ++      +   ++ ++  L  A +  KA  LF+   +     DV +YT+ I    + 
Sbjct: 212 KEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKA 271

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
           G  E+A  L+ +M+ +   P   TY  ++ ++ K + +     +   ++DA    +  T 
Sbjct: 272 GLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTY 331

Query: 571 IRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTPVSLFDGFVPCERR 630
             L   + K  + S A               E++ KL   SD   +     D + PCE R
Sbjct: 332 GALVDGLCKAGNISKAF--------------EVYAKLIGTSDSADS-----DFYFPCEDR 372

Query: 631 AGNANHLLLNGGV 643
              A +++  G +
Sbjct: 373 HTLAPNVVTYGAL 385


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/422 (26%), Positives = 204/422 (48%), Gaps = 8/422 (1%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
           FD M   G  PN +  NI++  L   G     + VL++ +     PN +++N  +   C+
Sbjct: 145 FDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCR 204

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
             +V   + ++ MM   G  PN+  F  ++N  CK GR+ +A ++   M+  G +    +
Sbjct: 205 AGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVS 264

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  L+ G+ ++     A  ++ +M + G  P+VVT+TSLI    +A     A   +  + 
Sbjct: 265 YNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMR 324

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G   + +    LID   K G  DDAL     + + ++ P    + +L++  C+ GR  
Sbjct: 325 ERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMD 384

Query: 378 LLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
              +LV  +E   V+ D+V Y+ +LS +CK G  + A +L   ML+ G  PD  ++  L+
Sbjct: 385 EARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLI 444

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
           R LC  +++ +A  +++ ++      +   +T+++D   + G   +A+ L    +     
Sbjct: 445 RVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVL 504

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
            DVV+Y+V I GL +  RT+EA  L  ++ H    P    Y   L+  C+   +K V  L
Sbjct: 505 PDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDA-LMRCCRNAELKSVLAL 563

Query: 555 LQ 556
           L+
Sbjct: 564 LK 565



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 126/525 (24%), Positives = 226/525 (43%), Gaps = 22/525 (4%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G  +    ++ ++   GC   A T+   +  + R           D M   G  PN    
Sbjct: 171 GHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTF 230

Query: 158 NIVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N V++ + K GR++   KV    +KE   P+ +S+N  +   CK+        V   M R
Sbjct: 231 NSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTR 290

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           KG  P+V  F  L++  CK G +  A  L+  M   G  ++   +T LIDGF +   LD 
Sbjct: 291 KGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDD 350

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A     +M Q    P+VV Y +LI G+        A   +  +E++G  PD+V ++ ++ 
Sbjct: 351 ALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILS 410

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEA 390
              K G    A  +   +LE  ++PD+ T+ SL+  +C   R     +L K +  L ++ 
Sbjct: 411 AYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQP 470

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           D V Y +L+   CK G   +A+ L++ M+  G  PD  ++  L+ GL  + +  EA  + 
Sbjct: 471 DEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLL 530

Query: 451 QGIVMNNPAV-------------NAHVHT--AIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
             +    P               NA + +  A++      G  ++A ++++  +   + L
Sbjct: 531 FKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNL 590

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
           D   Y+V I G    G   +A   + QM      PN+ +   ++    ++  +    +++
Sbjct: 591 DGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVI 650

Query: 556 QDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           Q +++     D   S  L     K  +  + ++ L  M   GL+P
Sbjct: 651 QQLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMARDGLLP 695



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 178/390 (45%), Gaps = 4/390 (1%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+ L++N  L  L   + + + +     M+  G  PNV  + IL+   C  G   EA  +
Sbjct: 121 PSVLAYNAVLLALSDAS-LPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSV 179

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           L  M   G   +   +  L+  F R   +D A  L + M + G  PN+VT+ S++ G  +
Sbjct: 180 LRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICK 239

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
           A     A    D +  EG APD V +N L+    K+G   +AL V+  +    ++PD  T
Sbjct: 240 AGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVT 299

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
           F SL+  +C +G       LV  +    ++ + + + AL+  FCK GF + A+     M 
Sbjct: 300 FTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMR 359

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
                P    +  L+ G C   ++DEA  + + +       +   ++ I+    + G  H
Sbjct: 360 QCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTH 419

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
            A QL ++ +      D ++Y+  IR L E  R  +A++L+  M  + + P+  TY  ++
Sbjct: 420 SAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLI 479

Query: 540 LSFCKERNIKMVKRLLQDVIDARIELDYHT 569
              CKE N++    L  +++ A +  D  T
Sbjct: 480 DGHCKEGNVERALSLHDEMVKAGVLPDVVT 509



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 193/430 (44%), Gaps = 13/430 (3%)

Query: 149 GFTPNTFARNIVM----DVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNV 204
           G+ P+  A N V+    D      R      +L +   PN  ++NI +  LC        
Sbjct: 118 GYAPSVLAYNAVLLALSDASLPSARRFFD-SMLSDGVAPNVYTYNILVRALCGRGHRKEA 176

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
             V+  M   G  PN   +  L+  FC+ G +  A +L+ +M   G   ++  +  +++G
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNG 236

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
             +  R++ A  ++++MV+ G +P+ V+Y +L+ G+ +      A S    +  +G  PD
Sbjct: 237 ICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPD 296

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPK 381
           +V    LI  + K G+ + A+ +   + E  L  +  TF +L+   C  G      L  +
Sbjct: 297 VVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVR 356

Query: 382 LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
            +    ++  +V YNAL++ +C  G  ++A +L   M  KG  PD  ++  +L   C   
Sbjct: 357 EMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNG 416

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYT 501
               A  + Q ++ N    +A  +++++  L E  R   A  LF+  I      D V+YT
Sbjct: 417 DTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYT 476

Query: 502 VAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL-----Q 556
             I G  + G  E A  L+ +M    V P+  TY V++    K    K  +RLL     +
Sbjct: 477 SLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHE 536

Query: 557 DVIDARIELD 566
           + + A I+ D
Sbjct: 537 EPVPANIKYD 546


>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
          Length = 645

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 123/512 (24%), Positives = 226/512 (44%), Gaps = 41/512 (8%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR      ++ ++AR GC      + + L    R   +   +    ++   G   +    
Sbjct: 125 GRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNC 184

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQLPNF------LSFNIALCNLCKLNDVSNVKDVIGMM 211
           N+V+  +   G VD  +++L++  LP+F      +S+N  L  LC      +V+D++  M
Sbjct: 185 NLVLQAVCDQGPVDEAVRLLRDL-LPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEM 243

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
           V  G  PN+  F  L+   C+ G     +++   M   G +  V  +  +IDG  +  RL
Sbjct: 244 VAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERL 303

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL-DMLESEGHAPDLVFHNV 330
           ++A  +  +M   G SPNVV Y +L+KG   A  +  A   L +M + +    D+ F N+
Sbjct: 304 EVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTF-NI 362

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA 390
           L+D L + G  D  ++V + +LE   +PD                               
Sbjct: 363 LVDFLCQNGLVDRVIEVLEQMLEHGCMPD------------------------------- 391

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
            ++ Y  +++ FCK G  ++AV L  +M   G  P+  S+  +L+GLC A +  +A  + 
Sbjct: 392 -VITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELM 450

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
             ++      N      +++ L + G   +AI+L ++ +V     D++SY+  I GL + 
Sbjct: 451 SQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 510

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
           G T+EA  L + M    + PN   Y  +  +   E  I  V ++ +++ D  +  D    
Sbjct: 511 GNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLY 570

Query: 571 IRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
             +   + K   +  A+  L  M + G +P+E
Sbjct: 571 NAVISSLCKRGETDRAIEFLAYMVSSGCVPNE 602



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/375 (26%), Positives = 184/375 (49%), Gaps = 8/375 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           ++ +F  +I  + R  G FE V  +  ++A  GC    + +   +    + E   +    
Sbjct: 251 NIVTFSTLIGHLCR-NGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGI 309

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE---TQLP-NFLSFNIALCNLCK 197
            + M  +G +PN    N ++  L    R +    +L E      P + ++FNI +  LC+
Sbjct: 310 LNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQ 369

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              V  V +V+  M+  G  P+V  +  ++N FCK G I EA  LL  M   G   +  +
Sbjct: 370 NGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVS 429

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T+++ G     R   A  L  +M+Q GC PN VT+ +LI    +  +   A   L  + 
Sbjct: 430 YTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQML 489

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G +PDL+ ++ +ID L K G+ D+AL++ + +++  + P++  + S+ S +   GR +
Sbjct: 490 VNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRIN 549

Query: 378 LLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
            + ++   ++   V +D V+YNA++S  CK G  ++A++    M+  G  P+  ++  L+
Sbjct: 550 KVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILI 609

Query: 435 RGLCGARKIDEAINV 449
           RGL     + EA  +
Sbjct: 610 RGLASEGFVKEAQEI 624



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/323 (22%), Positives = 123/323 (38%), Gaps = 12/323 (3%)

Query: 287 SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALD 346
           +PN  TY  L++        + A + LD +   G AP    ++V ++   +   +  A+ 
Sbjct: 108 APNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVG 167

Query: 347 VYDGLLELKLVPDSYTFCSLLSTVCLSGRF--------SLLPKLVCGLEVEADLVVYNAL 398
           V   L       D      +L  VC  G           LLP   C    E D+V YNA+
Sbjct: 168 VLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGC----EPDVVSYNAV 223

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           L   C A        L   M+  G  P+  +F  L+  LC     +    V+  +  +  
Sbjct: 224 LRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGC 283

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
           A +  ++  I+D + +  R   A  +  R        +VV Y   ++GL    R EEA  
Sbjct: 284 APDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEG 343

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
           L ++M     P +  T+ +++   C+   +  V  +L+ +++     D  T   +     
Sbjct: 344 LLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFC 403

Query: 579 KFHSSSSAVNQLVEMCNLGLIPD 601
           K      AV  L  M   G  P+
Sbjct: 404 KEGLIDEAVMLLRSMAACGCRPN 426



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 41/198 (20%), Positives = 87/198 (43%), Gaps = 4/198 (2%)

Query: 365 SLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
           +L+ ++C +GR +   + +      A +V YNA+++ +C+AG   Q              
Sbjct: 52  ALIRSLCAAGRTAEAARALSAAGGGAGVVAYNAMVAGYCRAG---QLAAARRLAASVPVA 108

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           P+ Y++  L+R LC   +I +A+ V   +     A    ++   ++    A     A+ +
Sbjct: 109 PNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGV 168

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAY-ILYSQMKHIAVPPNAYTYRVMLLSFC 543
            R        LDV +  + ++ + + G  +EA  +L   +      P+  +Y  +L   C
Sbjct: 169 LRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLC 228

Query: 544 KERNIKMVKRLLQDVIDA 561
             R    V+ L+++++ A
Sbjct: 229 MARRWGHVQDLMEEMVAA 246


>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
 gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
          Length = 670

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 147/565 (26%), Positives = 250/565 (44%), Gaps = 34/565 (6%)

Query: 27  SIHQISSPKVCATTHQDFPIILAPHIVHSTLLNC--PSDLIALSFFIWCAKQRDYFHDVQ 84
           S H I S K   T     P+    H   +   N   P   I+   F    K   Y     
Sbjct: 36  SAHAIPSTKTIETE----PLNHTQHCNTTDQENGIEPDPPISDKIFKSGPKMGSYRLGDS 91

Query: 85  SFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDE 144
           +F  +I+    L G F+++  ++  +     VI  + F++  + Y +  +    ++ FD 
Sbjct: 92  TFYSLINNYANL-GDFKSLEKVLDRMKCEKRVIFEKCFIVIFKAYGKAHLPEKAVDLFDR 150

Query: 145 MG------RFGFTPNTFARNIVMDVLFK---------IGRVDLGIKVLKETQLPNFLSFN 189
           M       R G + N+    I+ + LF          IG   + I        PN L+FN
Sbjct: 151 MACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSIS-------PNVLTFN 203

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
           + +  +CK+  V +   V   M  +   P+V  +  L++  CK  RI EA  LL  M   
Sbjct: 204 LVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQID 263

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           G   S   + VLI+G  +   L  A  L + M   GC PN VTY +LI G         A
Sbjct: 264 GCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKA 323

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
            S LD + S    P++V +  +I+ L K G   D   V   + E     + Y + +L+S 
Sbjct: 324 ISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISG 383

Query: 370 VCLSGRFSLLPKLVCGLEV---EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
           +   G+      L   + V   E + +VY+A++   C+ G P+ AV++ + M +KG TP+
Sbjct: 384 LFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPN 443

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
            Y+   L++G   A     A+ V++ +  +N   N   ++ ++  L + G+  +A+ ++ 
Sbjct: 444 AYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWT 503

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM--KHIAVPPNAYTYRVMLLSFCK 544
           + + +    DVV+Y+  I GL   G  E+A  LY++M  +     P+  TY ++L + CK
Sbjct: 504 QMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCK 563

Query: 545 ERNIKMVKRLLQDVIDARIELDYHT 569
           + +I     LL  ++D   + D  T
Sbjct: 564 QSSISRAIDLLNSMLDRGCDPDLVT 588



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 157/348 (45%), Gaps = 9/348 (2%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           R +    ++ E+   GC     TF + +    +        +  D M   G  PN    N
Sbjct: 249 RIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYN 308

Query: 159 IVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
            ++  L   G+++  I +L        +PN +++   +  L K     +   V+ +M  +
Sbjct: 309 TLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEER 368

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           G+  N  ++  L++   K G+  EA  L   M   G  L+   ++ +IDG  R  + D A
Sbjct: 369 GYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDA 428

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             +  +M   GC+PN  T +SL+KGF EA     A      +       + V ++VLI  
Sbjct: 429 VEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHG 488

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG----RFSLLPKLVC-GLEVE 389
           L K G   +A+ V+  +L     PD   + S+++ + ++G       L  +++C G + +
Sbjct: 489 LCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQ 548

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
            D+V YN LL+  CK    ++A+ L N+MLD+G  PD  +    LR L
Sbjct: 549 PDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRML 596



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 84/388 (21%), Positives = 179/388 (46%), Gaps = 7/388 (1%)

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           F  L+N +  +G      ++L  M      +    + V+   + +    + A  L+++M 
Sbjct: 93  FYSLINNYANLGDFKSLEKVLDRMKCEKRVIFEKCFIVIFKAYGKAHLPEKAVDLFDRMA 152

Query: 283 -QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD-MLESEGHA--PDLVFHNVLIDCLSKM 338
            +  C     ++ S++   ++  +F  A  F + ++ ++G +  P+++  N++I  + K+
Sbjct: 153 CEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKV 212

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVY 395
           G  DDA+ V+  +   K  PD YT+C+L+  +C + R      L+  ++++      V +
Sbjct: 213 GLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTF 272

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
           N L++  CK G  ++A KL + M  KG  P+  ++  L+ GLC   K+++AI++   +V 
Sbjct: 273 NVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVS 332

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
           +    N   +  I++ L++ GR      +        Y ++   Y+  I GL + G+++E
Sbjct: 333 SKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQE 392

Query: 516 AYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTK 575
           A  L+ +M       N   Y  ++   C++        +L ++ +     + +T   L K
Sbjct: 393 AMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMK 452

Query: 576 FIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
             F+  +S  AV    +M       +E+
Sbjct: 453 GFFEAGNSHRAVEVWKDMAKHNFTQNEV 480


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/496 (23%), Positives = 230/496 (46%), Gaps = 21/496 (4%)

Query: 85  SFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDE 144
            F  + SVV R T +++ V  +  ++   G      T  + +    R     +   A  +
Sbjct: 74  DFSRLFSVVAR-TKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGK 132

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLND 200
           + + G+ P+T   + +++ L   GRV    +L  ++++    P  ++ N  +  LC    
Sbjct: 133 IIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGK 192

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
           VS+   +I  MV  GF PN   +  +L   CK G+ A A +LL  M      L    +++
Sbjct: 193 VSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSI 252

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           +IDG  +   LD A  L+ +M   G   +++ YT+LI+GF  A  +      L  +    
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----- 375
             PD+V  + LIDC  K G   +A +++  +++  + PD+ T+ SL+   C   +     
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372

Query: 376 --FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
               L+    CG     ++  +N L++ +CKA   +  ++L+  M  +G   D  ++  L
Sbjct: 373 HMLDLMVSKGCG----PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTL 428

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           ++G C   K++ A  ++Q +V      +   +  ++D L + G   KA+++F +    K 
Sbjct: 429 IQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKM 488

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
            LD+  Y + I G+    + ++A+ L+  +    V P+  TY +M+   CK+ ++     
Sbjct: 489 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA-- 546

Query: 554 LLQDVIDARIELDYHT 569
              D++  ++E D H+
Sbjct: 547 ---DLLFRKMEEDGHS 559



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 115/432 (26%), Positives = 201/432 (46%), Gaps = 36/432 (8%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF----LSFNIALCNLCK 197
            D M   GF PN      V+ V+ K G+  L +++L++ +        + ++I +  LCK
Sbjct: 200 IDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCK 259

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              + N  ++   M  KGF  ++ ++  L+  FC  GR  +  +LL  MI    +  V A
Sbjct: 260 DGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA 319

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           ++ LID F +  +L  A  L ++M+Q G SP+ VTYTSLI GF +      A   LD++ 
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMV 379

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
           S+G  P++   N+LI+   K    DD L+++                     + L G   
Sbjct: 380 SKGCGPNIRTFNILINGYCKANLIDDGLELF-------------------RKMSLRG--- 417

Query: 378 LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
                     V AD V YN L+  FC+ G    A +L+  M+ +   PD  S+  LL GL
Sbjct: 418 ----------VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGL 467

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
           C   + ++A+ +++ I  +   ++  ++  I+  +  A +   A  LF    ++    DV
Sbjct: 468 CDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDV 527

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
            +Y + I GL + G   EA +L+ +M+     PN  TY +++ +   E +     +L+++
Sbjct: 528 KTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEE 587

Query: 558 VIDARIELDYHT 569
           +      +D  T
Sbjct: 588 IKRCGFSVDAST 599



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 107/474 (22%), Positives = 212/474 (44%), Gaps = 46/474 (9%)

Query: 170 VDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
           VDL  ++ +    P  + F+     + +      V D+   M  KG   N+    I++NC
Sbjct: 57  VDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINC 116

Query: 230 FCKM-----------------------------------GRIAEAYQLLGLMITLGTSLS 254
            C+                                    GR++EA +L+  M+ +G   +
Sbjct: 117 CCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPT 176

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           +     L++G     ++  A  L ++MV+ G  PN VTY  ++K   ++   ++A   L 
Sbjct: 177 LITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLR 236

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            +E      D V ++++ID L K GS D+A ++++ +       D   + +L+   C +G
Sbjct: 237 KMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAG 296

Query: 375 RFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
           R+    KL+  +   ++  D+V ++AL+  F K G   +A +L+  M+ +G +PD  ++ 
Sbjct: 297 RWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYT 356

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            L+ G C   ++D+A ++   +V      N      +++   +A      ++LFR+  + 
Sbjct: 357 SLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLR 416

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
               D V+Y   I+G  E G+ E A  L+ +M    V P+  +Y+++L   C     +  
Sbjct: 417 GVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKA 476

Query: 552 KRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEM-CNL---GLIPD 601
             + + +  +++ELD    I +   I     ++S V+   ++ C+L   G+ PD
Sbjct: 477 LEIFEKIEKSKMELD----IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPD 526



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 92/430 (21%), Positives = 193/430 (44%), Gaps = 8/430 (1%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           L G+      ++  +   G      T+   L++  +     + +E   +M       +  
Sbjct: 189 LNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAV 248

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKETQLPNFLS----FNIALCNLCKLNDVSNVKDVIGMM 211
             +I++D L K G +D    +  E ++  F +    +   +   C      +   ++  M
Sbjct: 249 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM 308

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
           +++   P+V  F  L++CF K G++ EA +L   MI  G S     +T LIDGF +  +L
Sbjct: 309 IKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQL 368

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           D A ++ + MV  GC PN+ T+  LI G+ +A +          +   G   D V +N L
Sbjct: 369 DKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTL 428

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---V 388
           I    ++G  + A +++  ++  ++ PD  ++  LL  +C +G      ++   +E   +
Sbjct: 429 IQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKM 488

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
           E D+ +YN ++   C A   + A  L+ ++  KG  PD  ++  ++ GLC    + EA  
Sbjct: 489 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADL 548

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           +++ +  +  + N   +  ++   +  G   K+ +L        + +D  +  + +  +L
Sbjct: 549 LFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVV-DML 607

Query: 509 EGGRTEEAYI 518
             GR +++++
Sbjct: 608 SDGRLKKSFL 617



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 91/384 (23%), Positives = 174/384 (45%), Gaps = 30/384 (7%)

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           D A  L+++M ++   P ++ ++ L       K + +       +E +G A +L   +++
Sbjct: 54  DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV---CGLEV 388
           I+C  +      A      +++L   PD+ TF +L++ +CL GR S   +LV     +  
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
           +  L+  NAL++  C  G  + AV L + M++ GF P+  ++  +L+ +C + +   A+ 
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           + + +      ++A  ++ I+D L + G    A  LF    ++ +  D++ YT  IRG  
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
             GR ++   L   M    + P+   +  ++  F KE  ++  + L +++I   I  D  
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353

Query: 569 TSIRLTKFIFKFHSSSSAVNQLVEM-------------------CNLGLIPD--EMWRKL 607
           T   L     K +    A + L  M                   C   LI D  E++RK+
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413

Query: 608 ---GLLSDETMTPVSLFDGFVPCE 628
              G+++D T+T  +L  GF  CE
Sbjct: 414 SLRGVVAD-TVTYNTLIQGF--CE 434


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 129/510 (25%), Positives = 223/510 (43%), Gaps = 9/510 (1%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           R E V  +V  L    C      F L +R Y +        EAF  +   G   +  A N
Sbjct: 9   RVEIVESLV--LTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACN 66

Query: 159 IVMDVLFKIGRVDLGIKVLKETQLP----NFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
            ++  L K+G VDL  ++ +E        N  + NI +  LCK   + N K  +  M  K
Sbjct: 67  SLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEK 126

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           G +P+V  +  L+N +C+ G + EA++L+  M   G    V  +  +I+G  +  +   A
Sbjct: 127 GVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRA 186

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             + ++M++ G SP+  TY  L+           A    D + S+G  PDLV  + LI  
Sbjct: 187 KGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGL 246

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---D 391
           LSK G  D AL  +  +    L PD+  +  L+   C +G  S   K+   +  +    D
Sbjct: 247 LSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLD 306

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
           +V YN +L+  CK    ++A +L+  M ++G  PD Y+F  L+ G      +++A+ +++
Sbjct: 307 VVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFE 366

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
            ++  N   +   +  ++D   +     K  +L+   I  +   + +SY + I G    G
Sbjct: 367 MMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMG 426

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSI 571
              EA+ L+ +M          T   ++  +C+  N       L +++   I  D  T  
Sbjct: 427 CVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYN 486

Query: 572 RLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            L     K  +   A   + +M N GL+PD
Sbjct: 487 TLINGFIKEENMDRAFALVNKMENSGLLPD 516



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 114/525 (21%), Positives = 220/525 (41%), Gaps = 37/525 (7%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           +V + + MI+ + +   + E  +  + ++   G      T+   +  Y R  +     E 
Sbjct: 96  NVYTLNIMINALCK-NQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFEL 154

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET----QLPNFLSFNIALCNLCK 197
            D M   G  P  F  N +++ L K G+      VL E       P+  ++NI L   C+
Sbjct: 155 MDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCR 214

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            +++ + + +   M  +G  P++  F  L+    K G + +A +    M   G +     
Sbjct: 215 NDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVI 274

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T+LI GF R   +  A  + ++M++ GC  +VVTY +++ G  + KM S A      + 
Sbjct: 275 YTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMT 334

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G  PD      LI+  SK G+ + A+ +++ +++  L P                   
Sbjct: 335 ERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKP------------------- 375

Query: 378 LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
                        D+V YN L+  FCK     +  +L+N M+ +   P++ S+  L+ G 
Sbjct: 376 -------------DVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGY 422

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
           C    + EA  ++  +V             IV     AG   KA +     +++    D 
Sbjct: 423 CNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDG 482

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
           ++Y   I G ++    + A+ L ++M++  + P+  TY V+L  F ++  ++  + ++  
Sbjct: 483 ITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLK 542

Query: 558 VIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
           +I+  +  D  T   L       ++   A     EM   G +PD+
Sbjct: 543 MIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDD 587



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/217 (21%), Positives = 92/217 (42%), Gaps = 18/217 (8%)

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID---------EA 446
           N+LL    K G+ + A ++Y  ++  G   + Y+   ++  LC  +KI+         E 
Sbjct: 66  NSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEE 125

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
             V+  +V  N  +NA+    +++         +A +L      +     V +Y   I G
Sbjct: 126 KGVFPDVVTYNTLINAYCRQGLLE---------EAFELMDSMSGKGLKPCVFTYNAIING 176

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           L + G+   A  +  +M  I + P+  TY ++L+  C+  N+   +R+  ++    +  D
Sbjct: 177 LCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPD 236

Query: 567 YHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
             +   L   + K      A+    +M N GL PD +
Sbjct: 237 LVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNV 273


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 132/564 (23%), Positives = 237/564 (42%), Gaps = 35/564 (6%)

Query: 41  HQDFPIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRF 100
           H   P   +P  +   L   P    ALS F W + Q +Y      F  ++  + R  G F
Sbjct: 50  HHPLPPDFSPSQLLDLLRRQPDSSSALSLFQWASAQPNYSAHPSVFHELLRQLAR-AGSF 108

Query: 101 ETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIV 160
           +++  ++ ++      +   TFL+FL  Y                        +   +  
Sbjct: 109 DSMLTLLRQMHSSKIPVDESTFLIFLETYA----------------------TSHHLHAE 146

Query: 161 MDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV 220
           ++ LF +   D  +K       P+   +N+AL  L K N +  V+ +   MV     P+V
Sbjct: 147 INPLFLLMERDFAVK-------PDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDV 199

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
             F IL+   CK  ++  A  +L  M   G       +T L+ GF     ++ A  + E 
Sbjct: 200 STFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKEL 259

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           MV++GC    V+   L+ G  +      A  F+   E EG  PD V  N L++ L + G 
Sbjct: 260 MVESGCELTSVSVNVLVNGLCKEGRIEEALRFI--YEEEGFCPDQVTFNALVNGLCRTGH 317

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNA 397
               L++ D +LE     D YT+ SL+S +C  G      +++  +   + E + V YN 
Sbjct: 318 IKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNT 377

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
           L+   CK      A +L   +  KG  PD  +F  L++GLC     + A+ +++ +    
Sbjct: 378 LIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKG 437

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAY 517
              +   ++ +++ L    R  +A+ L +   +     +VV Y   I GL +  R  +A 
Sbjct: 438 CDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAE 497

Query: 518 ILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFI 577
            ++ QM+ + V  ++ TY  ++   CK + ++   +L+  +I   ++ D  T   + K+ 
Sbjct: 498 DIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYF 557

Query: 578 FKFHSSSSAVNQLVEMCNLGLIPD 601
            +      A + +  M   G  PD
Sbjct: 558 CQQGDIKRAADIVQNMTLNGCEPD 581



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/417 (25%), Positives = 196/417 (47%), Gaps = 13/417 (3%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVL-----KETQLPNFLSFNIALCNLCKLNDVSN 203
           GF P+    N +++ L + G +  G++++     K  +L +  ++N  +  LCKL ++  
Sbjct: 297 GFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFEL-DVYTYNSLISGLCKLGEIDE 355

Query: 204 VKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLID 263
             +++  MV +   PN   +  L+   CK   +  A +L  ++ + G    V  +  LI 
Sbjct: 356 AVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQ 415

Query: 264 GFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP 323
           G       ++A  L+E+M + GC P+  TY+ LI+     +    A   L  +E  G A 
Sbjct: 416 GLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCAR 475

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV 383
           ++V +N LID L K     DA D++D +  L +   S T+ +L++ +C S R     +L+
Sbjct: 476 NVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLM 535

Query: 384 CGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
             + +E    D   Y  +L YFC+ G   +A  +   M   G  PD  ++  L+ GLC A
Sbjct: 536 DQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKA 595

Query: 441 RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSY 500
            ++D A  + + + M    +    +  ++  L +  R  +A++LFR  + +  P DV++Y
Sbjct: 596 GRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITY 655

Query: 501 TVAIRGLLE-GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
            +  RGL   GG  +EA     +M    + P   ++  +    C   ++ M   L+Q
Sbjct: 656 KIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLC---SLSMEDTLIQ 709



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 122/520 (23%), Positives = 232/520 (44%), Gaps = 27/520 (5%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET 180
           TF + +R   +       +   ++M  +G  P+      +M    +   V+  +++ KE 
Sbjct: 201 TFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRI-KEL 259

Query: 181 QLPN-----FLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGR 235
            + +      +S N+ +  LCK   +      I     +GF P+   F  L+N  C+ G 
Sbjct: 260 MVESGCELTSVSVNVLVNGLCKEGRIEEALRFI--YEEEGFCPDQVTFNALVNGLCRTGH 317

Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
           I +  +++  M+  G  L V  +  LI G  +L  +D A  +   MV   C PN VTY +
Sbjct: 318 IKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNT 377

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           LI    +      A     +L S+G  PD+   N LI  L    + + A+++++ + E  
Sbjct: 378 LIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKG 437

Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAV 412
             PD +T+  L+ ++C   R      L+  +E+     ++VVYN L+   CK      A 
Sbjct: 438 CDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAE 497

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
            +++ M   G +  + ++  L+ GLC +++++EA  +   ++M     +   +T ++   
Sbjct: 498 DIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYF 557

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYS--QMKHIAVPP 530
            + G   +A  + +   +     D+V+Y   I GL + GR + A  L    QMK + + P
Sbjct: 558 CQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTP 617

Query: 531 NAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSS-----SS 585
            AY    ++ + CK +  K   RL +++++     D  T     K +F+   +       
Sbjct: 618 QAYN--PVIQALCKRKRTKEAMRLFREMMEKGDPPDVIT----YKIVFRGLCNGGGPIQE 671

Query: 586 AVNQLVEMCNLGLIPDEMWRKLGLLSDETMTPVSLFDGFV 625
           AV+  VEM   G++P+  +   G L+ E +  +S+ D  +
Sbjct: 672 AVDFTVEMLEKGILPE--FPSFGFLA-EGLCSLSMEDTLI 708



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 89/350 (25%), Positives = 145/350 (41%), Gaps = 41/350 (11%)

Query: 109 ELARV----GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVL 164
           ELARV    G +    TF   ++         + +E F+EM   G  P+ F  +I+++ L
Sbjct: 393 ELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESL 452

Query: 165 FKIGRVDLGIKVLKETQLP----NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV 220
               R+   + +LKE +L     N + +N  +  LCK N V + +D+   M   G   + 
Sbjct: 453 CSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSS 512

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
             +  L+N  CK  R+ EA QL+  MI  G       +T ++  F +   +  A  + + 
Sbjct: 513 VTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQN 572

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           M  NGC P++VTY +LI G  +A    +A   L  ++ +G       +N +I  L K   
Sbjct: 573 MTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKR 632

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLS 400
             +A+ ++  ++E    PD                                ++ Y  +  
Sbjct: 633 TKEAMRLFREMMEKGDPPD--------------------------------VITYKIVFR 660

Query: 401 YFCKAGFP-NQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
             C  G P  +AV     ML+KG  P+  SF  L  GLC     D  I +
Sbjct: 661 GLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQL 710



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/286 (22%), Positives = 121/286 (42%), Gaps = 11/286 (3%)

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LL 379
           PD  F+NV +  L K         ++  ++   + PD  TF  L+  +C + +     L+
Sbjct: 162 PDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILM 221

Query: 380 PKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
            + +    +  D   +  L+  F +      A+++   M++ G    + S   L+ GLC 
Sbjct: 222 LEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCK 281

Query: 440 ARKIDEAIN-VYQ--GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
             +I+EA+  +Y+  G   +    NA     +V+ L   G   + +++    + + + LD
Sbjct: 282 EGRIEEALRFIYEEEGFCPDQVTFNA-----LVNGLCRTGHIKQGLEMMDFMLEKGFELD 336

Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
           V +Y   I GL + G  +EA  +   M      PN  TY  ++ + CKE +++    L +
Sbjct: 337 VYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELAR 396

Query: 557 DVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
            +    +  D  T   L + +    +   A+    EM   G  PDE
Sbjct: 397 VLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDE 442



 Score = 47.8 bits (112), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 7/170 (4%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFL----SFNIALCNLCKLNDVSNV 204
           G  P+      ++  L K GRVD+  K+L+  Q+   +    ++N  +  LCK       
Sbjct: 577 GCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEA 636

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMG-RIAEAYQLLGLMITLGTSLSVNAWTVLID 263
             +   M+ KG  P+V  ++I+    C  G  I EA      M+  G      ++  L +
Sbjct: 637 MRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAE 696

Query: 264 GFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
           G   L   D    L   +++ G      + TS+I+GF++ + F+ A + L
Sbjct: 697 GLCSLSMEDTLIQLINMVMEKGRFSQ--SETSIIRGFLKIQKFNDALANL 744


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/434 (24%), Positives = 210/434 (48%), Gaps = 7/434 (1%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G+ +    ++ ++   G V    ++ + +  Y + E  G VL+  +E+ R G  PN +  
Sbjct: 266 GKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTY 325

Query: 158 NIVMDVLFKIGRV---DLGIKVLKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N ++  L K GRV   +  ++V+K  ++ P+ + +   +    K  +VS    +   M R
Sbjct: 326 NSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKR 385

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           K   P+   +  +++  C+ G++ EA +L   M++ G       +T LIDG+ +   +  
Sbjct: 386 KKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKE 445

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L  +MV+ G +PNVVTYT+L+ G  +     IA   L  +  +G  P++  +N LI+
Sbjct: 446 AFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALIN 505

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL---LPKLVCGLEVEA 390
            L K+G+ + A+ + + +      PD+ T+ +++   C  G  +    L +++    ++ 
Sbjct: 506 GLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQP 565

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
            +V +N L++ FC +G      +L   MLDKG  P+  +F  L++  C    +   I +Y
Sbjct: 566 TIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIY 625

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
           +G+       + + +  ++    +A    +A  L +  + + + L   SY   I+G  + 
Sbjct: 626 KGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKR 685

Query: 511 GRTEEAYILYSQMK 524
            + EEA  L+ +M+
Sbjct: 686 KKFEEARKLFEEMR 699



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 107/468 (22%), Positives = 211/468 (45%), Gaps = 7/468 (1%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           F E    G   NT + NI++ +L ++G+V     +L + +    +P+ +S+++ +   C+
Sbjct: 240 FREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQ 299

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
           +  +  V  ++  + RKG  PN   +  +++  CK GR+ EA Q+L +M           
Sbjct: 300 VEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVV 359

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T LI GF +   + +   L+++M +    P+ VTYTS+I G  +A     A      + 
Sbjct: 360 YTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEML 419

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
           S+G  PD V +  LID   K G   +A  +++ ++E  L P+  T+ +L+  +C  G   
Sbjct: 420 SKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVD 479

Query: 378 LLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
           +  +L+  +    ++ ++  YNAL++  CK G   QAVKL   M   GF PD  ++  ++
Sbjct: 480 IANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIM 539

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
              C   ++ +A  + + ++             +++    +G      +L +  + +   
Sbjct: 540 DAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIM 599

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
            +  ++   ++             +Y  M    V P+  TY +++   CK RN+K    L
Sbjct: 600 PNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFL 659

Query: 555 LQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
            +++++    L   +   L K  +K      A     EM   G I ++
Sbjct: 660 HKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEK 707



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 115/460 (25%), Positives = 216/460 (46%), Gaps = 16/460 (3%)

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIAL----CNLCKLNDVSNVKDVIGMM 211
           A  +V DV F++  V+ G+ +         L++ + +    CNL  L  +SN  D I   
Sbjct: 179 AHPLVFDVFFQV-LVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLF-LARLSNSFDGIRTA 236

Query: 212 VRK-------GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
            R        G   N   + I+L+  C++G++ EA+ LL  M   G    V +++V++DG
Sbjct: 237 FRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDG 296

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
           + ++ +L     L E++ + G  PN  TY S+I    +      A   L +++++   PD
Sbjct: 297 YCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPD 356

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVC 384
            V +  LI    K G+      ++D +   K+VPD  T+ S++  +C +G+     KL  
Sbjct: 357 NVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFS 416

Query: 385 GL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
            +    ++ D V Y AL+  +CKAG   +A  L+N M++KG TP+  ++  L+ GLC   
Sbjct: 417 EMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCG 476

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYT 501
           ++D A  +   +       N   + A+++ L + G   +A++L     +  +  D ++YT
Sbjct: 477 EVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYT 536

Query: 502 VAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
             +    + G   +A+ L   M    + P   T+ V++  FC    ++  +RL++ ++D 
Sbjct: 537 TIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDK 596

Query: 562 RIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            I  +  T   L K     ++  + +     M   G++PD
Sbjct: 597 GIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPD 636



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 60/260 (23%), Positives = 119/260 (45%), Gaps = 39/260 (15%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNL 195
           E   EM   G  PN    N +++ L K+G ++  +K+++E  L    P+ +++   +   
Sbjct: 483 ELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAY 542

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG----- 250
           CK+ +++   +++ +M+ KG  P +  F +L+N FC  G + +  +L+  M+  G     
Sbjct: 543 CKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNA 602

Query: 251 ---TSL---------------------------SVNAWTVLIDGFRRLRRLDMAGYLWEK 280
               SL                             N + +LI G  + R +  A +L ++
Sbjct: 603 TTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKE 662

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           MV+ G S    +Y SLIKGF + K F  A    + + + G   +   +++ +D   + G+
Sbjct: 663 MVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGN 722

Query: 341 YDDALDVYDGLLELKLVPDS 360
           +++ L++ D  +E  LV  +
Sbjct: 723 WENTLELCDEAIEKCLVKKT 742


>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 129/529 (24%), Positives = 240/529 (45%), Gaps = 20/529 (3%)

Query: 61  PSDLIALSFFIWCAKQRDYFHDVQSFDHMISV-------VTRLTGRFETVRGIVG----- 108
           PS     +  + C KQ ++   ++  D M+SV       VTR   +   V G V      
Sbjct: 288 PSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQL 347

Query: 109 --ELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK 166
             E+   G V     F + +    +        E +  M   G  PN F  N +++   +
Sbjct: 348 FDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHE 407

Query: 167 IGRVDLGIKVLKET---QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMF 223
              ++    +  E     + N +++NI L  L +L  V+   ++   MV KG  P++  +
Sbjct: 408 QNLLEHAYGLFDEAVEHGITNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSY 467

Query: 224 EILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQ 283
             L+   CK G + +AY +L  ++  G   +   +T+LIDGF +    + A  ++E+M+ 
Sbjct: 468 NNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMA 527

Query: 284 NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
              +P   T+ ++I G  +    S     L+    +G     + +N +ID   K G+ D 
Sbjct: 528 ANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDS 587

Query: 344 ALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLS 400
           AL  Y  + E  + PD  T+ SL+  +C S +  L  ++   ++ +    D+V Y+AL+ 
Sbjct: 588 ALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALID 647

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
            FCK      A K +  +LD G TP+   +  ++ G      ++ A+N++Q ++ N    
Sbjct: 648 GFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPC 707

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
           +  V+T+I+  L++ G+   A+ L+   + +    D+V YTV I GL   G+ E A  + 
Sbjct: 708 DLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKIL 767

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
            +M    + P+   Y +++    +E N++   RL  +++D  +  D  T
Sbjct: 768 KEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTT 816



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 120/523 (22%), Positives = 230/523 (43%), Gaps = 12/523 (2%)

Query: 88  HMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGR 147
           H++       G+FE V     E    G  + A  + + ++   R     +  E   EM  
Sbjct: 224 HVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMRE 283

Query: 148 FGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALC-----NLCKLNDVS 202
           FG+ P+      V+    K G     ++ LK+  +   L  N+ +        C L DV+
Sbjct: 284 FGWVPSKGTYTAVIVACVKQGNFVEALR-LKDEMVSVGLPMNVIVTRSLMKGYCVLGDVN 342

Query: 203 NVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLI 262
               +   +V  G  P+V +F +L+N   K+G + +AY+L   M  +G   +V     L+
Sbjct: 343 LALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLL 402

Query: 263 DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
           +GF     L+ A  L+++ V++G + NVVTY  L+K   E    + A +  + + S+G  
Sbjct: 403 EGFHEQNLLEHAYGLFDEAVEHGIT-NVVTYNILLKWLGELGKVNEACNLWEKMVSKGIT 461

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG----RFSL 378
           P LV +N LI    K G  D A  +   +LE  L P++ T+  L+      G     F +
Sbjct: 462 PSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVV 521

Query: 379 LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
             +++       D   +N +++   K G  ++     N  + +GF   + ++  ++ G  
Sbjct: 522 FEQMMAANIAPTDHT-FNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFF 580

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
               +D A+  Y+ +  +  + +   +T+++D L ++ +   A+++      +   LDVV
Sbjct: 581 KEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVV 640

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           +Y+  I G  +    E A   ++++  I + PN   Y  M+  F    N++    L Q++
Sbjct: 641 AYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEM 700

Query: 559 IDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           I  ++  D      +   + K    S A++   EM +  ++PD
Sbjct: 701 IKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPD 743



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 106/425 (24%), Positives = 192/425 (45%), Gaps = 16/425 (3%)

Query: 100 FETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA---FDEMGRFGFTPNTFA 156
            E   G+  E    G +    T+ + L+  W GE+ G V EA   +++M   G TP+  +
Sbjct: 411 LEHAYGLFDEAVEHG-ITNVVTYNILLK--WLGEL-GKVNEACNLWEKMVSKGITPSLVS 466

Query: 157 RNIVMDVLFKIGRVDLGIKVLK---ETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N ++    K G +D    +LK   E  L PN +++ + +    K  D      V   M+
Sbjct: 467 YNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMM 526

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
                P    F  ++N   K GR++E    L   I  G   +   +  +IDGF +   +D
Sbjct: 527 AANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVD 586

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A   + +M ++G SP+V+TYTSLI G  ++    +A      ++ +G   D+V ++ LI
Sbjct: 587 SALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALI 646

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC----LSGRFSLLPKLVCGLEV 388
           D   KM   + A   +  LL++ L P++  + S++S       +    +L  +++   +V
Sbjct: 647 DGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKN-KV 705

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
             DL VY +++    K G  + A+ LY+ ML K   PD   +  L+ GL    +++ A  
Sbjct: 706 PCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASK 765

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           + + +  NN   +  V+  ++      G   +A +L    + +    D  +Y + + G L
Sbjct: 766 ILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNGKL 825

Query: 509 EGGRT 513
           +   T
Sbjct: 826 KVSHT 830



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/393 (20%), Positives = 170/393 (43%), Gaps = 4/393 (1%)

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
           R GF  + R+F  LL  F ++ +I +A +    M+       V     L+    R   + 
Sbjct: 143 RYGFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVC 202

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A  L+++MV+ G   +  T   +++  M+   F     F    +  G   D   +++L+
Sbjct: 203 DARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILV 262

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVE 389
             + +    + A ++   + E   VP   T+ +++      G F    +L   +  + + 
Sbjct: 263 QAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLP 322

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            +++V  +L+  +C  G  N A++L++ +++ G  PD   F  L+ G      +++A  +
Sbjct: 323 MNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYEL 382

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
           Y  + +     N  +  ++++   E      A  LF  A VE    +VV+Y + ++ L E
Sbjct: 383 YTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEA-VEHGITNVVTYNILLKWLGE 441

Query: 510 GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
            G+  EA  L+ +M    + P+  +Y  ++L  CK+  +     +L+ +++  ++ +  T
Sbjct: 442 LGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVT 501

Query: 570 SIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
              L    FK   S  A     +M    + P +
Sbjct: 502 YTLLIDGFFKKGDSERAFVVFEQMMAANIAPTD 534



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/289 (20%), Positives = 127/289 (43%), Gaps = 7/289 (2%)

Query: 82  DVQSFDHMISVVTR---LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMV 138
           ++   DH  + V      TGR    +  +    + G V  + T+   +  +++       
Sbjct: 529 NIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSA 588

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP----NFLSFNIALCN 194
           L A+ EM   G +P+      ++D L K  ++ L +++  + +      + ++++  +  
Sbjct: 589 LLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDG 648

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
            CK++D+ +       ++  G  PN  ++  +++ F  +  +  A  L   MI       
Sbjct: 649 FCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCD 708

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           +  +T +I G  +  +L +A  L+ +M+     P++V YT LI G         A   L 
Sbjct: 709 LQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILK 768

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
            ++     P ++ +N+LI    + G+  +A  ++D +L+  LVPD  T+
Sbjct: 769 EMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTY 817


>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1071

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 145/600 (24%), Positives = 248/600 (41%), Gaps = 65/600 (10%)

Query: 65  IALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGR---FETVRGIVGELARVG------- 114
           +AL F  W  +Q     +++   HM+S+ T +  R   +E  + I+  L+++G       
Sbjct: 27  LALKFLNWVIQQPGL--ELRHLTHMLSITTHILVRARLYENAKSILKHLSQMGVGSKSVF 84

Query: 115 ---------CVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
                    C      F L +R+Y R  M G  LE F  MG  GF P+ +  N+++  L 
Sbjct: 85  GALMNTYPLCKSNPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLV 144

Query: 166 K---IGRVDLGIK-VLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
           K   +G V L  K +L     P+  +FNI +  LC    +     ++  M   G+ P+V 
Sbjct: 145 KERKVGAVWLFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVV 204

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            +  +LN +CK GR   A +L+  M + G       + +L+D   +  R      L +KM
Sbjct: 205 TYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKM 264

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
            +   SPN +TY S+I GF++      A      +      P+ V +N LID     G++
Sbjct: 265 RKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNF 324

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLV---VYNAL 398
           + AL + + +      P+  ++ +LL+ +C   +F L   ++  + +   +V    Y A+
Sbjct: 325 EQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAM 384

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID-------------- 444
           +   C+ G  N++VKL + ML  G  PD  +F  L+ G C   KI               
Sbjct: 385 IDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGL 444

Query: 445 ---------------------EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
                                EA  VY  +       N  +   +V  L + G+   A  
Sbjct: 445 APNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEY 504

Query: 484 LFRR-AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
            F   + +   P + +++   I G    G   +A+ ++ +M      P+ +TY  +L + 
Sbjct: 505 FFHHMSKIGNVP-NSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKAL 563

Query: 543 CKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
           C+    K  KRLL  +      +D  T   +    FK    + AV    EM    ++PD 
Sbjct: 564 CRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDS 623



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 103/464 (22%), Positives = 200/464 (43%), Gaps = 40/464 (8%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G FE    I+  +   G      ++   L    R   + +     + M   G      A 
Sbjct: 322 GNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAY 381

Query: 158 NIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
             ++D L + G ++  +K+L    K+  +P+ ++F++ +   C++  + NVK++I  M +
Sbjct: 382 TAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYK 441

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G  PN  ++  L+  +CK G + EA+++   M  +G   +     VL+    +  ++ +
Sbjct: 442 AGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGV 501

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A Y +  M + G  PN +T+  +I G+  +     AFS  D +   GH P    +  L+ 
Sbjct: 502 AEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLK 561

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLV 393
            L + G + +A  + D   +L  +P +                              D V
Sbjct: 562 ALCRAGKFKEAKRLLD---KLHYIPSA-----------------------------VDTV 589

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            YN +L    K+G    AV L++ M+ +   PD+Y++  +  GL    K+  A++ Y G 
Sbjct: 590 TYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFY-GN 648

Query: 454 VMNNPAVNAH--VHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
           ++   AV+    ++T  VD L  AG+   A+             D+++  V + G    G
Sbjct: 649 LLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMG 708

Query: 512 RTEEAYILYSQM-KHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
           +  +A  +++ M   I + P+  TY ++L  + K++N+     L
Sbjct: 709 KMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNL 752



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 121/570 (21%), Positives = 240/570 (42%), Gaps = 20/570 (3%)

Query: 48   LAPH-IVHSTLLN--CPSDLIALSFFIWCAKQRDYFHDVQSF--DHMISVVTRLTGRFET 102
            LAP+ I+++TL+   C +  +  +F ++ A  R   +D   F  + ++S + +  G+   
Sbjct: 444  LAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSR-IGYDANCFICNVLVSSLCK-DGKVGV 501

Query: 103  VRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMD 162
                   ++++G V  + TF   +  Y            FDEM + G  P+ F    ++ 
Sbjct: 502  AEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLK 561

Query: 163  VLFKIGRVDLGIKVLKETQ-LP---NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYP 218
             L + G+     ++L +   +P   + +++N  L    K   +++   +   MV++   P
Sbjct: 562  ALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLP 621

Query: 219  NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT-SLSVNAWTVLIDGFRRLRRLDMAGYL 277
            +   + I+     + G++  A    G ++  G  S     +T  +DG  R  +   A Y 
Sbjct: 622  DSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYF 681

Query: 278  WEKMVQNGCSPNVVTYTSLIKGFME-AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
             E M +NG   +++    ++ G+    KM      F  M      +P L  +N+L+   +
Sbjct: 682  CEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYA 741

Query: 337  KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLV 393
            K  +     ++Y+ ++   + PD  T  SL+   C S    +  KL+  +    V  D  
Sbjct: 742  KKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQC 801

Query: 394  VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
             +N L+  +C+     +A  L N M      PD  +   ++  L     + E+  +   +
Sbjct: 802  TFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEM 861

Query: 454  VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
            +      +   + A+V+R+   G  H A +L             V+ +  +RGL + G+ 
Sbjct: 862  LERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKV 921

Query: 514  EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL-LQDVID-ARIELDYHTSI 571
            EEA ++   M   ++ P   T+  ++  FC  RN  +V+ L L+D +D   ++LD     
Sbjct: 922  EEAKLVLDFMLRKSLIPTIATFTTLMHMFC--RNESLVEALKLKDTMDFCDVKLDVIAYN 979

Query: 572  RLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
             L   +      +SA+    E+   GL P+
Sbjct: 980  VLISGLCADGDVASALKLYKEIKQRGLWPN 1009



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 105/474 (22%), Positives = 202/474 (42%), Gaps = 14/474 (2%)

Query: 97   TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
             G+F+  + ++ +L  +   +   T+   L   ++  M    +  FDEM +    P+++ 
Sbjct: 566  AGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYT 625

Query: 157  RNIVMDVLFKIGRVDLGIKVL-----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
              I+   L + G++   +        K    P  + +   +  L +             M
Sbjct: 626  YAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDM 685

Query: 212  VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM---ITLGTSLSVNAWTVLIDGFRRL 268
             + G   ++    ++LN + +MG++A+A  +  +M   IT+  SL+   + +L+ G+ + 
Sbjct: 686  EKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLAT--YNILLHGYAKK 743

Query: 269  RRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH 328
            + L     L+  M++ G  P+ +T  SLI GF ++ M  +    L  +  +G A D    
Sbjct: 744  KNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTF 803

Query: 329  NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT---FCSLLSTVCLSGRFSLLPKLVCG 385
            N+LI    +      A D+ + +    + PD  T     S+LS V       LL   +  
Sbjct: 804  NMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLE 863

Query: 386  LEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
                 D   Y AL++  C+ G  + A KL + M   G +  + +   L+RGL    K++E
Sbjct: 864  RGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEE 923

Query: 446  AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
            A  V   ++  +        T ++          +A++L          LDV++Y V I 
Sbjct: 924  AKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLIS 983

Query: 506  GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS-FCKERNIKMVKRLLQDV 558
            GL   G    A  LY ++K   + PN  TY +++ + F  + ++   + LL+D+
Sbjct: 984  GLCADGDVASALKLYKEIKQRGLWPNMTTYCILIDAIFTNDISLAKGEVLLKDL 1037


>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 701

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 129/547 (23%), Positives = 236/547 (43%), Gaps = 47/547 (8%)

Query: 64  LIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFL 123
           L ALS F   +  R+  H    F H++  +   +     V  IV  +    C  K    L
Sbjct: 27  LSALSLFE--SASRNKSHSAHVFHHILRRLAADSRLVSHVSRIVDIVKAQKCPCKEDVAL 84

Query: 124 LFLRIYWRGEMYGMVLEAFDEMGR-FGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL 182
             ++ Y + +M    L+ F  M   FG  P   + N +++   ++   D      +  + 
Sbjct: 85  TVIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFES 144

Query: 183 ----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAE 238
               PN  ++NI +   CK   +     ++  M  +   P+V  +  L+N   K+G +  
Sbjct: 145 MDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLG 204

Query: 239 AYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCS--PNVVTYTSL 296
           A ++   M   G    V  + +LIDGF +    D    +WE++V++ CS  PNVVTY  +
Sbjct: 205 ALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKD-CSVYPNVVTYNIM 263

Query: 297 IKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
           I G  +   F  +    + +       D+  ++ LI  L + G+ D A+ VY  ++E  L
Sbjct: 264 INGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSL 323

Query: 357 VPDSYTFCSLLSTVCLSGRF--SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKL 414
           V D+ T  ++L+  C +G+   S    +V G E    +V YN L+    + G   +A+ +
Sbjct: 324 VVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQTVVSYNILIKGLFENGKVEEAISI 383

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
           +  +  KG  P++ ++  L+ GLC   ++++A+ +++        ++A+ ++++VD L +
Sbjct: 384 WELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCK 443

Query: 475 AGRCHKAIQLFRRAIVEKYPLD-----------------------------------VVS 499
            GR  +AI +  +     Y LD                                   +VS
Sbjct: 444 EGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVS 503

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           Y   I+GL +  R  EAY    +M      P+  T  +++   C+E+ I+M   L Q  +
Sbjct: 504 YNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQAL 563

Query: 560 DARIELD 566
           D   + D
Sbjct: 564 DKGFKPD 570



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 116/479 (24%), Positives = 217/479 (45%), Gaps = 14/479 (2%)

Query: 132 GEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE-----TQLPNFL 186
           G++ G  L+ FDEM   G   +    N+++D  FK G  D G ++ +      +  PN +
Sbjct: 200 GDLLG-ALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVV 258

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           ++NI +  LCK        ++   M +     ++  +  L++  C+ G I  A ++   +
Sbjct: 259 TYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEI 318

Query: 247 ITLGTSLSVNAWT--VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
           +   +SL V+A T   +++GF R  ++  +  LW  M +  C   VV+Y  LIKG  E  
Sbjct: 319 VE--SSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQ-TVVSYNILIKGLFENG 375

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
               A S  ++L  +G  P+   + VLI  L K G  + AL ++    +     D+Y + 
Sbjct: 376 KVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYS 435

Query: 365 SLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
           S++  +C  GR      +V  ++      D  V N L++ F +A     A+  +  M  K
Sbjct: 436 SMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECK 495

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
           G +P   S+  L++GLC A +  EA +  + ++      +    + ++D L +  +   A
Sbjct: 496 GCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMA 555

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
           + L+++A+ + +  D+  Y + + GL    + E+A  LYS MK     PN  T   ++  
Sbjct: 556 LNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEG 615

Query: 542 FCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
             K R+ +    +   ++   +  D  +     K +      S A+  L +  N G++P
Sbjct: 616 LYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILP 674



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 107/517 (20%), Positives = 217/517 (41%), Gaps = 46/517 (8%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
           A+S   W   Q +   DV S+  +I+ + ++ G       +  E++  G V     + + 
Sbjct: 170 AISLLDWMWSQ-NLKPDVFSYGTLINGMVKV-GDLLGALKVFDEMSVRGVVADVTCYNML 227

Query: 126 LRIYWRGEMYGMVLEAFDEMGR-FGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KET 180
           +  +++   Y    E ++ + +     PN    NI+++ L K GR D  +++     K  
Sbjct: 228 IDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNE 287

Query: 181 QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAY 240
           +  +  +++  +  LC+  ++     V   +V      +      +LN FC+ G+I E++
Sbjct: 288 REKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESF 347

Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
           +L  +M       +V ++ +LI G     +++ A  +WE + + GC P   TY  LI G 
Sbjct: 348 ELWMVMGKENCQ-TVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGL 406

Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD----------- 349
            +    + A       E      D   ++ ++D L K G  D+A+ + +           
Sbjct: 407 CKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDP 466

Query: 350 --------GLLELKLVPDSYTF--------CS--------LLSTVCLSGRFSLLPKLVCG 385
                   G +    + D+  F        CS        L+  +C + RFS     V  
Sbjct: 467 HVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKE 526

Query: 386 L---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
           +   E + D++  + L+   C+      A+ L+   LDKGF PD   +  L+ GLC   K
Sbjct: 527 MLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCK 586

Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTV 502
           +++A+ +Y  +  +    N      +++ L +     KA +++   + +    D++SY +
Sbjct: 587 LEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNI 646

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
            I+GL    R  +A    +   +  + P A T+ +++
Sbjct: 647 TIKGLCSCSRISDAIEFLNDALNRGILPTAVTWNILV 683



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 83/392 (21%), Positives = 162/392 (41%), Gaps = 41/392 (10%)

Query: 52  IVHSTLLN--CPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGE 109
           + H+ +LN  C +  I  SF +W    ++    V S++ +I  +    G+ E    I   
Sbjct: 328 VTHNAMLNGFCRAGKIKESFELWMVMGKENCQTVVSYNILIKGLFE-NGKVEEAISIWEL 386

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
           L + GC  ++ T+ + +    +       L+ F E        + +A + ++D L K GR
Sbjct: 387 LCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGR 446

Query: 170 VDLGIKVLKETQLPNFLSFNIALCN--LCKLNDVSNVKDVIGM---MVRKGFYPNVRMFE 224
           +D  I ++ +     +   +  +CN  +      S ++D I     M  KG  P +  + 
Sbjct: 447 MDEAISIVNQMDKRGY-KLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYN 505

Query: 225 ILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN 284
            L+   CK  R +EAY  +  M+       +   ++L+DG  + ++++MA  LW++ +  
Sbjct: 506 TLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDK 565

Query: 285 GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
           G  P++  Y  L+ G         A      ++     P+LV  N L++ L K+  Y+ A
Sbjct: 566 GFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKA 625

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCK 404
            +++D +L+  L PD                                ++ YN  +   C 
Sbjct: 626 SEIWDCILKDGLHPD--------------------------------IISYNITIKGLCS 653

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
               + A++  N  L++G  P   ++  L+R 
Sbjct: 654 CSRISDAIEFLNDALNRGILPTAVTWNILVRA 685


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 192/378 (50%), Gaps = 3/378 (0%)

Query: 170 VDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
           +DL   +++   LP+   F+  L  + K+     V  +   M   G   N+    ILLNC
Sbjct: 66  LDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNC 125

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
           FC+  +++ A   LG M+ LG    +  +  L++GF R  R+  A Y++++MV+ G  PN
Sbjct: 126 FCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPN 185

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
           VV Y ++I G  ++K    A   L+ +E +G  PD V +N LI  L   G +DDA  +  
Sbjct: 186 VVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVS 245

Query: 350 GLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAG 406
            + + ++ PD +TF +L+      GR S   +L   +    ++ D+V Y+ L+   C   
Sbjct: 246 CMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYS 305

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
             ++A +++  M+ KG  PD  ++  L+ G C ++K++  + ++  +       N   +T
Sbjct: 306 RLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYT 365

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
            ++     AG+ + A ++F+  +    P ++++Y V + GL + G+ E+A ++ + M+  
Sbjct: 366 VLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKS 425

Query: 527 AVPPNAYTYRVMLLSFCK 544
            +  +  TY +++   CK
Sbjct: 426 GMDADIVTYNIIIRGMCK 443



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 102/399 (25%), Positives = 194/399 (48%), Gaps = 11/399 (2%)

Query: 155 FARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGM 210
           F+R  ++  + K+ + D+ I + ++ Q+     N  + NI L   C+ + +S     +G 
Sbjct: 84  FSR--LLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGK 141

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M++ G  P++  F  LLN FC+  RI +A  +   M+ +G   +V  +  +IDG  + ++
Sbjct: 142 MMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQ 201

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           +D A  L  +M  +G  P+ VTY SLI G   +  +  A   +  +      PD+   N 
Sbjct: 202 VDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNA 261

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA 390
           LID   K G   +A ++Y+ ++   L PD  T+  L+  +C+  R     ++  G  V  
Sbjct: 262 LIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMF-GFMVSK 320

Query: 391 ----DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
               D+V Y+ L++ +CK+      +KL+  M  +G   +  ++  L++G C A K++ A
Sbjct: 321 GCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVA 380

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
             +++ +V      N   +  ++  L + G+  KA+ +           D+V+Y + IRG
Sbjct: 381 EEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRG 440

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
           + + G   +A+ LY  +    + P+ +TY  M+L   K+
Sbjct: 441 MCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKK 479



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/402 (26%), Positives = 192/402 (47%), Gaps = 4/402 (0%)

Query: 206 DVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF 265
           D+   MV+    P++  F  LL+   KM +      L   M  LG   ++    +L++ F
Sbjct: 67  DLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCF 126

Query: 266 RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL 325
            R  +L +A     KM++ G  P++VT+ SL+ GF        A    D +   G+ P++
Sbjct: 127 CRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNV 186

Query: 326 VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCG 385
           V +N +ID L K    D+ALD+ + +    + PD+ T+ SL+S +C SGR+    ++V  
Sbjct: 187 VIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSC 246

Query: 386 L---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
           +   E+  D+  +NAL+    K G  ++A +LY  M+ +   PD  ++  L+ GLC   +
Sbjct: 247 MTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSR 306

Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTV 502
           +DEA  ++  +V      +   ++ +++   ++ +    ++LF          + V+YTV
Sbjct: 307 LDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTV 366

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
            I+G    G+   A  ++  M    VPPN  TY V+L   C    I+    +L D+  + 
Sbjct: 367 LIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSG 426

Query: 563 IELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMW 604
           ++ D  T   + + + K    + A +    +   GL PD +W
Sbjct: 427 MDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPD-IW 467



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 165/338 (48%), Gaps = 7/338 (2%)

Query: 107 VGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK 166
           +G++ ++G      TF   L  + RG+     L  FD M   G+ PN    N ++D L K
Sbjct: 139 LGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCK 198

Query: 167 IGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
             +VD  + +L   ++    P+ +++N  +  LC      +   ++  M ++  YP+V  
Sbjct: 199 SKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFT 258

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           F  L++   K GRI+EA +L   MI       +  +++LI G     RLD A  ++  MV
Sbjct: 259 FNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMV 318

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
             GC P+VVTY+ LI G+ ++K           +   G   + V + VLI    + G  +
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLN 378

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALL 399
            A +++  ++   + P+  T+  LL  +C +G+      ++  ++   ++AD+V YN ++
Sbjct: 379 VAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIII 438

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
              CKAG    A  LY ++  KG TPD +++  ++ GL
Sbjct: 439 RGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGL 476



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 120/263 (45%), Gaps = 3/263 (1%)

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL---LPKLVCGLEVEADLVVYNAL 398
           DD+LD++  +++ + +P    F  LLS +    ++ +   L + +  L +  +L   N L
Sbjct: 63  DDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNIL 122

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           L+ FC+    + A+     M+  G  PD  +F  LL G C   +I +A+ ++  +V    
Sbjct: 123 LNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGY 182

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
             N  ++  I+D L ++ +   A+ L  R  V+    D V+Y   I GL   GR ++A  
Sbjct: 183 EPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATR 242

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
           + S M    + P+ +T+  ++ +  KE  I   + L +++I   ++ D  T   L   + 
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLC 302

Query: 579 KFHSSSSAVNQLVEMCNLGLIPD 601
            +     A      M + G  PD
Sbjct: 303 MYSRLDEAEQMFGFMVSKGCFPD 325


>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
 gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
          Length = 991

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 133/570 (23%), Positives = 243/570 (42%), Gaps = 58/570 (10%)

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
           + R GC    + F   +    +    G     FD M + G  P+    N ++    K+GR
Sbjct: 279 MKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGR 338

Query: 170 VD--LGIKVLKETQ--LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEI 225
           ++  L IK L E     P+  ++N  +  LC        ++++   V++GF P V  F  
Sbjct: 339 MNDALKIKELMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTN 397

Query: 226 LLNCFC-----------------------------------KMGRIAEAYQLLGLMITLG 250
           L+N +C                                   K  R+ EA +LL  +   G
Sbjct: 398 LINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANG 457

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
              +V  +T +IDG+ +  ++D+A  + + M ++GC PN  TY SL+ G ++ K    A 
Sbjct: 458 LVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAM 517

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
           + L  ++ +G  P+++ +  L+        +D+A  +++ + +  L PD + +  L   +
Sbjct: 518 ALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDAL 577

Query: 371 CLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           C +GR       +    V    V Y  L+  F KAG  + A  L   M+D+G TPD+Y++
Sbjct: 578 CKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTY 637

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             LL  LC  ++++EA+ +   + +         +T ++D ++  G+   A +++     
Sbjct: 638 SVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTS 697

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
             +     +YTV I    + GR E+A  L  +M+   V P+  TY +++        I  
Sbjct: 698 SGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDR 757

Query: 551 VKRLLQDVIDARIELDYHTSIRLTKFIFKFHSS------SSAVNQLVEMCNLGLIPDEMW 604
               L+ ++ A  E +Y T   L K + K + +      +S +  L+E+       D  W
Sbjct: 758 AFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIEL-------DITW 810

Query: 605 RKLGLLSDETMTPV-----SLFDGFVPCER 629
           + L  +    + P      SL  GF    R
Sbjct: 811 QLLERMVKHGLNPTVTTYSSLIAGFCKAGR 840



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 118/504 (23%), Positives = 223/504 (44%), Gaps = 31/504 (6%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D+Q F  +I+ + +   R +  + ++ E++  G V    T+   +  Y +     + LE 
Sbjct: 426 DLQVFGKLINSLIK-KDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEV 484

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
              M R G  PN +  N +M  L K  ++   + +L + Q    +PN +++   L   C 
Sbjct: 485 LKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCD 544

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            +D  N   +  MM + G  P+   + +L +  CK GR  EAY  +   +  G +L+   
Sbjct: 545 EHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI---VRKGVALTKVY 601

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T LIDGF +    D A  L E+M+  GC+P+  TY+ L+    + K  + A   LD + 
Sbjct: 602 YTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMS 661

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G    +  + +LID + + G +D A  +Y+ +      P + T+   +++ C  GR  
Sbjct: 662 LRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLE 721

Query: 378 LLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
               L+  +E E    D+V YN L+      G+ ++A      M+     P+ +++  LL
Sbjct: 722 DAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLL 781

Query: 435 R----------------GLCGARKIDEAINVYQGIVMN--NPAVNAHVHTAIVDRLIEAG 476
           +                G+    ++D    + + +V +  NP V    +++++    +AG
Sbjct: 782 KHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVT--TYSSLIAGFCKAG 839

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
           R  +A  L      +    +   YT+ I+   +    E+A    S M      P   +YR
Sbjct: 840 RLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYR 899

Query: 537 VMLLSFCKERNIKMVKRLLQDVID 560
           ++++  C E + + VK L  D+++
Sbjct: 900 LLVVGLCNEGDFEKVKSLFCDLLE 923



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 126/566 (22%), Positives = 235/566 (41%), Gaps = 56/566 (9%)

Query: 45  PIILAPHIVH--STLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFET 102
           P + A H+          P    AL+FF W A++  + H   S   ++ +++R     + 
Sbjct: 50  PSVTAAHVADLFRADSTAPEPATALAFFEWLARRDGFRHTADSHAALLHLLSRRRAPAQY 109

Query: 103 VRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMG--RFGFTPNTFA---R 157
            R +V  L    C   A+             +    ++A    G  R   +P  +    R
Sbjct: 110 ERLVVSML---NCSDTAEDM----------RVSADAIQAIRRTGSARLALSPKCYNFALR 156

Query: 158 NIV-MDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
           ++   D+   +GRV    +++++  LP+ +++N  + + CK  D++       +++  G 
Sbjct: 157 SLARFDMTEYMGRV--YSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGL 214

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
            P       L+  +C+ G + +A  L  +M  +G   +  ++T+LI G    + +  A  
Sbjct: 215 EPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALV 274

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           L+  M ++GCSPNV  +T LI G  ++     A    D +   G  P ++ +N +I   S
Sbjct: 275 LFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYS 334

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYN 396
           K+G  +DAL + + + +    PD +T                                YN
Sbjct: 335 KLGRMNDALKIKELMEKNGCHPDDWT--------------------------------YN 362

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            L+   C      +A +L N  + +GFTP   +F  L+ G C A K D+A+ +   ++ +
Sbjct: 363 TLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSS 421

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
              ++  V   +++ LI+  R  +A +L           +V++YT  I G  + G+ + A
Sbjct: 422 KCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIA 481

Query: 517 YILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKF 576
             +   M+     PNA+TY  ++    K++ +     LL  +    I  +  T   L + 
Sbjct: 482 LEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQG 541

Query: 577 IFKFHSSSSAVNQLVEMCNLGLIPDE 602
               H   +A      M   GL PDE
Sbjct: 542 QCDEHDFDNAFRLFEMMEQNGLKPDE 567



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/419 (24%), Positives = 186/419 (44%), Gaps = 30/419 (7%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIK-VLKETQLPNFLSFNIALCNLCKLND 200
           F+ M + G  P+  A  ++ D L K GR +     ++++      + +   +    K  +
Sbjct: 555 FEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGN 614

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
                 +I  M+ +G  P+   + +LL+  CK  R+ EA  +L  M   G   ++ A+T+
Sbjct: 615 TDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTI 674

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           LID   R  + D A  ++ +M  +G  P+  TYT  I  + +      A   +  +E EG
Sbjct: 675 LIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREG 734

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS-----------T 369
            APD+V +N+LID    MG  D A      ++     P+ +T+C LL            +
Sbjct: 735 VAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRS 794

Query: 370 VCLSGRFSLLPKLVCGLEVE--------ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
           V  SG ++L+   +    +E          +  Y++L++ FCKAG   +A  L + M  K
Sbjct: 795 VDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGK 854

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH-- 479
           G +P+   +  L++  C  +  ++A++     +M+       + +    RL+  G C+  
Sbjct: 855 GLSPNEDIYTLLIKCCCDTKFFEKALSFVS--IMSECGFQPQLESY---RLLVVGLCNEG 909

Query: 480 ---KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
              K   LF   +   Y  D V++ +   GLL+ G  +  + + S M+      ++ TY
Sbjct: 910 DFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTY 968



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 70/296 (23%), Positives = 118/296 (39%), Gaps = 55/296 (18%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG 173
           GC   + T+ + L    + +     L   D+M   G     FA  I++D + + G+ D  
Sbjct: 629 GCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHA 688

Query: 174 IKVLKET----QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
            ++  E       P+  ++ + + + CK   + + +D+I  M R+G  P+V  + IL++ 
Sbjct: 689 KRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDG 748

Query: 230 FCKMGRIAEAY------------------------------------------------- 240
              MG I  A+                                                 
Sbjct: 749 CGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDI 808

Query: 241 --QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIK 298
             QLL  M+  G + +V  ++ LI GF +  RL+ A  L + M   G SPN   YT LIK
Sbjct: 809 TWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIK 868

Query: 299 GFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
              + K F  A SF+ ++   G  P L  + +L+  L   G ++    ++  LLEL
Sbjct: 869 CCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLEL 924



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/319 (22%), Positives = 138/319 (43%), Gaps = 30/319 (9%)

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
           L  +G  PD V +N +I    K G    A   +  LLE  L P+++T  +L+   C +G 
Sbjct: 174 LVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGE 233

Query: 376 -------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
                  F ++P + C    + +   Y  L+   C A    +A+ L+  M   G +P+  
Sbjct: 234 LRKACWLFLMMPLMGC----QRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVR 289

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
           +F  L+ GLC + ++ +A  ++  +  N    +   + A++    + GR + A+++  + 
Sbjct: 290 AFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKI--KE 347

Query: 489 IVEK---YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
           ++EK   +P D  +Y   I GL +  +TEEA  L +        P   T+  ++  +C  
Sbjct: 348 LMEKNGCHP-DDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMA 405

Query: 546 RNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWR 605
                  R+   ++ ++ +LD     +L   + K      A   L E+   GL+P+    
Sbjct: 406 EKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPN---- 461

Query: 606 KLGLLSDETMTPVSLFDGF 624
                    +T  S+ DG+
Sbjct: 462 --------VITYTSIIDGY 472


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 130/534 (24%), Positives = 242/534 (45%), Gaps = 11/534 (2%)

Query: 77  RDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYG 136
           +D+  D + FD    V+    G  +  R +  ++   G +I   +  LF+  +   ++ G
Sbjct: 176 KDWGSDPRVFDIFFQVLVE-AGMLDEARKLFDKMLNYGLLISVDSCNLFIS-HLSEDLDG 233

Query: 137 M--VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNI 190
           +   L+ F E    G   NT + NI+   L ++GRV    ++L + +L    P+ +S++ 
Sbjct: 234 IKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYST 293

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +   C++ ++  V  +I  M  KG  PN   +  ++   CK G++AEA ++L  MI+ G
Sbjct: 294 VINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEG 353

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
            +     +T LIDGF +L  +  A  L+++M +   SP+ +TYT++I G  +      A 
Sbjct: 354 IAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEAD 413

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
                +  +   PD V +  LID   K G   +A  +++ +L++ L P+  T+ +L   +
Sbjct: 414 KLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGL 473

Query: 371 CLSGRFSLLPKLV---CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           C  G      +L+   C   +E ++  YN+L++  CKAG  +QAVKL   M   GF PD 
Sbjct: 474 CKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDA 533

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
            ++  L+   C +R++  A  + + ++             +++    +G      +L + 
Sbjct: 534 VTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKW 593

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN 547
            + +    +  +Y   I+             +Y  M    V P+  TY +++   CK RN
Sbjct: 594 MLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARN 653

Query: 548 IKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           +K    L +D++     L   +   L K  +K      A     +M   GL+ D
Sbjct: 654 MKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVAD 707



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 106/447 (23%), Positives = 203/447 (45%), Gaps = 7/447 (1%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR      ++ ++   GC+    ++   +  Y +      VL+  +EM   G  PN +  
Sbjct: 267 GRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTY 326

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N V+ +L K G+V    +VL+E       P+ + +   +   CKL +VS+   +   M +
Sbjct: 327 NGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQK 386

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +   P+   +  ++   C+ GR+ EA +L   M+          +T LIDG+ +  ++  
Sbjct: 387 RKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKE 446

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L  +M+Q G +PN+VTYT+L  G  +      A   L  +  +G   ++  +N L++
Sbjct: 447 AFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVN 506

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG---RFSLLPKLVCGLEVEA 390
            L K G+ D A+ +   +      PD+ T+ +L+   C S    R   L + +   E++ 
Sbjct: 507 GLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQP 566

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
            +V +N L++ FC +G      KL   ML+KG  P+  ++  L++  C    +     +Y
Sbjct: 567 TVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIY 626

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
           +G+       + + +  ++    +A    +A  L R  + + + L V SY   I+G  + 
Sbjct: 627 RGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKR 686

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRV 537
            +  EA  L+ QM+   +  +   Y +
Sbjct: 687 KKFLEARELFEQMRREGLVADREIYNI 713



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 109/262 (41%), Gaps = 39/262 (14%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNL 195
           E   EM R G   N +  N +++ L K G +D  +K++K+ ++    P+ +++   +   
Sbjct: 484 ELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAY 543

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
           CK  ++    +++  M+ +   P V  F +L+N FC  G + +  +LL  M+  G   + 
Sbjct: 544 CKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNA 603

Query: 256 -----------------------------------NAWTVLIDGFRRLRRLDMAGYLWEK 280
                                              N + +LI G  + R +  A +L   
Sbjct: 604 TTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRD 663

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           MV  G +  V +Y +LIKGF + K F  A    + +  EG   D   +N+  D     G 
Sbjct: 664 MVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGK 723

Query: 341 YDDALDVYDGLLELKLVPDSYT 362
            +  L++ D  +E  LV D  T
Sbjct: 724 MELTLELCDEAIEKCLVGDIQT 745


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 113/430 (26%), Positives = 206/430 (47%), Gaps = 44/430 (10%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFL 186
           +G+++  +L   D +   GF  +      ++  L K+G     + +L+        PN +
Sbjct: 140 KGQIHQALL-FHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVV 198

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
            ++  +  +CK   V++  D+   MV KG  PNV  +  L++ F  +G++ +A  L   M
Sbjct: 199 MYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKM 258

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
           I       V  + +L+DGF +  ++     ++  M++ G  PNVVTY SL+ G+   K  
Sbjct: 259 ILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEV 318

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
           + A S L  +   G  PD+  +N+LID   K+   D+A++++  +    ++PD  T+ SL
Sbjct: 319 NKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSL 378

Query: 367 LSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           +  +C  G+ S   KLV  +    V  D++ Y+++L   CK    ++A+ L   + D+G 
Sbjct: 379 IDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGI 438

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
            P+ Y++  L+ GLC   ++++A N+++ +                              
Sbjct: 439 RPNMYTYTILIDGLCKGGRLEDAHNIFEDL------------------------------ 468

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS-F 542
                +V+ Y + V +YTV I G    G  +EA  L S+MK  +  P+A TY +++ S F
Sbjct: 469 -----LVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLF 523

Query: 543 CKERNIKMVK 552
            K+ N K  K
Sbjct: 524 DKDENDKAEK 533



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 87/352 (24%), Positives = 176/352 (50%), Gaps = 11/352 (3%)

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           G++PN   F  L+   C  G+I +A      ++ +G  L    +  LI G  ++     A
Sbjct: 122 GYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAA 181

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             L  ++  N   PNVV Y+++I G  + K  + AF     + S+G +P++V ++ LI  
Sbjct: 182 LDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 241

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-------FSLLPKLVCGLE 387
              +G   DA+D+++ ++   + PD YTF  L+   C  G+       F+++ K      
Sbjct: 242 FFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQ----G 297

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
           ++ ++V Y +L+  +C     N+A  +  TM  +G  PD  S+  L+ G C  +K+DEA+
Sbjct: 298 IKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAM 357

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
           N+++ +   +   +   + +++D L + G+   A++L         P D+++Y+  +  L
Sbjct: 358 NLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDAL 417

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
            +  + ++A  L +++K   + PN YTY +++   CK   ++    + +D++
Sbjct: 418 CKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLL 469



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/328 (21%), Positives = 141/328 (42%), Gaps = 22/328 (6%)

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           L+ ++++   +P  + +  ++   +++K +    S    +E EG  P ++FH      L 
Sbjct: 63  LFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINP-VLFHFQHPHQL- 120

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLV 393
            MG +                P++ TF +L+  +CL G+     L    V  +  + D V
Sbjct: 121 -MGYH----------------PNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQV 163

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            Y  L+   CK G    A+ L   +      P+   +  ++ G+C  + +++A ++Y  +
Sbjct: 164 GYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEM 223

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
           V    + N   ++A++      G+   AI LF + I+E    DV ++ + + G  + G+ 
Sbjct: 224 VSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKM 283

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
           +E   +++ M    + PN  TY  ++  +C  + +   K +L  +    +  D  +   L
Sbjct: 284 KEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNIL 343

Query: 574 TKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
                K      A+N   EM +  +IPD
Sbjct: 344 IDGFCKIKKVDEAMNLFKEMHHKHIIPD 371


>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
 gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
 gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
          Length = 913

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 126/516 (24%), Positives = 229/516 (44%), Gaps = 60/516 (11%)

Query: 136 GMVLEAFDEMGR-FGFTPNTFARNIVMDVLFKIGRVDLGIKVL--------KETQLPNFL 186
           G  L   D++ R FG  P+  + N+V+ VL    R D     L        ++   P   
Sbjct: 120 GRALHLLDQLPRRFGVQPSFRSYNVVLSVL---ARADCHADALALYRRMVHRDRVPPTTF 176

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           +F +A   LC+L        ++  M R G  P+  +++ +++  C  G + EA  LL  M
Sbjct: 177 TFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEM 236

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
           + +G +  VN +  ++ G   L R+  A  L ++M+  GC P V+TY  L++G    +  
Sbjct: 237 LLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQA 296

Query: 307 SIAFSFLDMLESEGHAPDL---VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
             A + L      G  P+L   +F+ V+  CL++ G   +A ++Y+ +      PD++T+
Sbjct: 297 DEARAML------GRVPELNVVLFNTVIGGCLAE-GKLAEATELYETMGLKGCQPDAHTY 349

Query: 364 CSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
             L+  +C  GR     +L+  +E +    ++V Y  +L  FCK G  +    L   M  
Sbjct: 350 SILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSA 409

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN--NPAV------------------ 460
           KG T ++  + G++  LC   ++DEA+ + Q +     NP +                  
Sbjct: 410 KGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEE 469

Query: 461 ---------------NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
                          N   +  I+  L+  GR   A++L +  I+    LDVVSY   I+
Sbjct: 470 AEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIK 529

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
            + + G  + + +L  +M    + PN  +Y +++   CKER ++    L + +++  +  
Sbjct: 530 AMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAP 589

Query: 566 DYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           D  T   L   + K     +A+N L ++ N  + PD
Sbjct: 590 DIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPD 625



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 104/474 (21%), Positives = 210/474 (44%), Gaps = 17/474 (3%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA---FDEMGRFGFTPNT 154
           GR +    ++  +AR GCV  A  +   +         G V EA    +EM   G   + 
Sbjct: 189 GRADEALALLRGMARHGCVPDAVLYQTVIHALCD---QGGVTEAATLLNEMLLMGCAADV 245

Query: 155 FARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGM 210
              + V+  +  +GRV    +++        +P  +++   L  LC++      + ++G 
Sbjct: 246 NTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGR 305

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           +       NV +F  ++      G++AEA +L   M   G     + +++L+ G  +L R
Sbjct: 306 VPEL----NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGR 361

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           +  A  L  +M + G +PNVVTYT ++  F +  M+    + L+ + ++G   +   +N 
Sbjct: 362 IGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNG 421

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE- 389
           +I  L K G  D+A+ +   +      PD  ++ +++  +C + +      +   L  E 
Sbjct: 422 MIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEG 481

Query: 390 --ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
             A+ + YN ++    + G    AV+L   M+  G + D  S+ GL++ +C    +D ++
Sbjct: 482 VVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSL 541

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            + + +       N   +  ++  L +  R   A++L ++ + +    D+V+Y   I GL
Sbjct: 542 VLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGL 601

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
            + G    A  L  ++ +  V P+  TY +++   CK R +     LL   + A
Sbjct: 602 CKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAA 655



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/192 (23%), Positives = 81/192 (42%), Gaps = 4/192 (2%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           + E    +   L   G V    T+   +    R   +   +    EM   G + +  + N
Sbjct: 466 QMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYN 525

Query: 159 IVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
            ++  + K G VD  + +L+E       PN +S+NI +  LCK   V +  ++   M+ +
Sbjct: 526 GLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQ 585

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           G  P++  +  L+N  CKMG +  A  LL  +        +  + +LI    ++R LD A
Sbjct: 586 GLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDA 645

Query: 275 GYLWEKMVQNGC 286
             L  + +   C
Sbjct: 646 AMLLNRAMAAVC 657


>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 114/467 (24%), Positives = 217/467 (46%), Gaps = 42/467 (8%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNL 195
           + ++E+   G   N +   I++D L +  R+   +  L+ET      P+ +SFN  +   
Sbjct: 221 DVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGF 280

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
           CK+  V   K    MM++ G  P+V  + ILL+  C  G + EA +    M   G    +
Sbjct: 281 CKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDI 340

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF-----------MEAK 304
             + +L +GFR L  +  A  + ++M+ NG +P++VTYT LI G            ++ K
Sbjct: 341 VTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEK 400

Query: 305 MFSI------------------------AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           M S                         A   L  +E  G  PDL+ ++VLI  L K G+
Sbjct: 401 MLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGA 460

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNA 397
            ++A+++Y+ +   ++ P+S+   +++S +   G  S   +    V   +V  ++++YN 
Sbjct: 461 VEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNI 520

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
           ++  + K G   +AV+ Y  +++KG +P   +F  L+ G C   K+ EA+ +   I ++ 
Sbjct: 521 MIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHG 580

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAY 517
               +  +T +++   E G  H    +      +      ++YTV ++GL + GR  E+ 
Sbjct: 581 LVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESV 640

Query: 518 ILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
            L   M    + P+  TY  ++ SFCK  +++   +L   ++   ++
Sbjct: 641 QLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQ 687



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/408 (25%), Positives = 191/408 (46%), Gaps = 6/408 (1%)

Query: 202 SNVKDVIGMMVRKG---FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
           S ++D +  +   G   F P+V  F  L++ FCKMG +  A     +MI  G    V ++
Sbjct: 249 SRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSY 308

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
            +L+ G      ++ A      M  +G  P++VTY  L  GF    + S A+  +  +  
Sbjct: 309 NILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLL 368

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL 378
            G  PDLV + +LI    +MG+ +++  + + +L   L     T+  LLS++C SGR   
Sbjct: 369 NGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDE 428

Query: 379 LPKLVCGLEV---EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
              L+  +EV   + DL+ Y+ L+   CK G   +A++LY  M  K   P+++    ++ 
Sbjct: 429 AVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIIS 488

Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
           GL     I EA   +  +  ++ A    ++  ++D   + G   +A++ +++ I +    
Sbjct: 489 GLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISP 548

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
            +V++   I G  + G+  EA  L   +K   + P + TY  ++  +C+E ++  +  +L
Sbjct: 549 TIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDML 608

Query: 556 QDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
            ++    I+    T   + K + K      +V  L  M   GL PD++
Sbjct: 609 HEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQI 656



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/452 (21%), Positives = 196/452 (43%), Gaps = 43/452 (9%)

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCN 194
           LE  ++M   G  P+    NI+ +    +G +    KV++   L    P+ +++ I +C 
Sbjct: 325 LEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICG 384

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
            C++ ++     +   M+ +G   ++  + +LL+  CK GRI EA  LL  M  +G    
Sbjct: 385 HCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPD 444

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           +  ++VLI G  +   ++ A  L+E+M      PN    +++I G  E    S A  + D
Sbjct: 445 LLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFD 504

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            +     A +++ +N++ID  +K+G+  +A+  Y  ++E  + P   TF SL+   C  G
Sbjct: 505 SVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKG 564

Query: 375 RFSLLPKLVCGLEV-------------------EADL-------------------VVYN 396
           + +   KL+  ++V                   E D+                   + Y 
Sbjct: 565 KLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYT 624

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            ++   CK G  +++V+L   M  +G  PD  ++  +++  C A  + +A  ++  ++ +
Sbjct: 625 VVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQH 684

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
           +   +   +  +++ L   G    A +L      +   L  V+YT  I+     G  + A
Sbjct: 685 SLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNA 744

Query: 517 YILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
            + + QM       +   Y  ++   CK RN+
Sbjct: 745 LVFFHQMVERGFEVSIRDYSAVINRLCK-RNL 775



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 148/318 (46%), Gaps = 6/318 (1%)

Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
           N  ++++L   + +   + +A  +L  M  L   +S+  +  L+     LR  D+   ++
Sbjct: 167 NNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLL---YNLRHTDIMWDVY 223

Query: 279 EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
            ++  +G   N  T   LI G         A +FL     E   P +V  N L+    KM
Sbjct: 224 NEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKM 283

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVY 395
           GS D A   +  +++  L+PD Y++  LL  +C++G      +    +E   VE D+V Y
Sbjct: 284 GSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTY 343

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
           N L + F   G  + A K+   ML  G  PD  ++  L+ G C    I+E+  + + ++ 
Sbjct: 344 NILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLS 403

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
               ++   +T ++  L ++GR  +A+ L     V     D+++Y+V I GL + G  EE
Sbjct: 404 QGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEE 463

Query: 516 AYILYSQMKHIAVPPNAY 533
           A  LY +M    + PN++
Sbjct: 464 AIELYEEMCSKRIYPNSF 481



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 74/357 (20%), Positives = 150/357 (42%), Gaps = 7/357 (1%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           +GR +    ++ E+  +G      T+ + +    +       +E ++EM      PN+F 
Sbjct: 423 SGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFV 482

Query: 157 RNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            + ++  LF+ G +         V K       + +NI +    KL ++         ++
Sbjct: 483 CSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQII 542

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
            KG  P +  F  L+  FCK G++AEA +LL  +   G   +   +T L++G+     + 
Sbjct: 543 EKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMH 602

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
               +  +M      P  +TYT ++KG  +      +   L  + + G  PD + +N +I
Sbjct: 603 SMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVI 662

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VE 389
               K      A  +++ +L+  L P   T+  L++ +C+ G      +L+  L+   + 
Sbjct: 663 QSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIR 722

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
              V Y  ++   C  G    A+  ++ M+++GF      +  ++  LC    I +A
Sbjct: 723 LTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDA 779



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/304 (21%), Positives = 127/304 (41%), Gaps = 14/304 (4%)

Query: 136 GMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIK----VLKETQLPNFLSF 188
           G + EA   FD + +          NI++D   K+G +   ++    ++++   P  ++F
Sbjct: 494 GAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTF 553

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           N  +   CK   ++    ++  +   G  P    +  L+N +C+ G +   + +L  M  
Sbjct: 554 NSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEA 613

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
                +   +TV++ G  +  RL  +  L + M   G  P+ +TY ++I+ F +A     
Sbjct: 614 KAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQK 673

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           AF   + +      P  V +NVLI+ L   G+  DA  +   L +  +      + +++ 
Sbjct: 674 AFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIK 733

Query: 369 TVCLSGRFS----LLPKLVC-GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
             C  G          ++V  G EV   +  Y+A+++  CK      A   +  ML  G 
Sbjct: 734 AHCAKGDVQNALVFFHQMVERGFEV--SIRDYSAVINRLCKRNLITDAKFFFCMMLTHGI 791

Query: 424 TPDN 427
            PD 
Sbjct: 792 PPDQ 795



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/250 (20%), Positives = 111/250 (44%), Gaps = 6/250 (2%)

Query: 114 GCVIKAQTFLLFLRIY-WRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDL 172
           G V  + T+   +  Y   G+M+ M  +   EM      P      +V+  L K GR+  
Sbjct: 580 GLVPTSVTYTTLMNGYCEEGDMHSM-FDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHE 638

Query: 173 GIKVLK----ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLN 228
            +++LK        P+ +++N  + + CK +D+     +   M++    P+   + +L+N
Sbjct: 639 SVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLIN 698

Query: 229 CFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSP 288
             C  G + +A +LL  +      L+  A+T +I        +  A   + +MV+ G   
Sbjct: 699 GLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEV 758

Query: 289 NVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVY 348
           ++  Y+++I    +  + + A  F  M+ + G  PD     V+++   + G  +   +++
Sbjct: 759 SIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIF 818

Query: 349 DGLLELKLVP 358
             +++  L+P
Sbjct: 819 AMMIKCGLLP 828



 Score = 47.0 bits (110), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 43/196 (21%), Positives = 80/196 (40%), Gaps = 5/196 (2%)

Query: 373 SGRFSLLPKLVCGLEVEADL--VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           SG    L +L+C    + DL  VV++ L   + +A   + A+ +   M          ++
Sbjct: 147 SGSAPSLCELLCNSFRDWDLNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATY 206

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             LL  L   R  D   +VY  I  +    N + +  ++D L    R   A+   R    
Sbjct: 207 NSLLYNL---RHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGG 263

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
           E++   VVS+   + G  + G  + A   +  M    + P+ Y+Y ++L   C   +++ 
Sbjct: 264 EEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEE 323

Query: 551 VKRLLQDVIDARIELD 566
                 D+ +  +E D
Sbjct: 324 ALEFTNDMENHGVEPD 339


>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
          Length = 987

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 128/506 (25%), Positives = 219/506 (43%), Gaps = 40/506 (7%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD-- 171
           GC +   T+ L ++   +           DEM   G  P+ +  N ++D   K GR+   
Sbjct: 279 GCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDA 338

Query: 172 LGIKVLKETQ--LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
           LGIK L E     P+  ++N  +  LC    +   ++++   + +GF P V  F  L+N 
Sbjct: 339 LGIKALMEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLING 397

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLI--------------------------- 262
           +CK  RI +A ++   MI+    L + A+ VLI                           
Sbjct: 398 YCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPN 457

Query: 263 --------DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
                   DG+ ++  +  A  +++ M   GC PN  TY SLI G ++ K    A + + 
Sbjct: 458 VVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALIT 517

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            ++ +G  P ++ +  LI    K   +D+A  +++ + +  L PD   +  L   +C SG
Sbjct: 518 KMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSG 577

Query: 375 RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
           R       +    V    V Y +L+  F KAG  + A  L   M+++G   D Y++  LL
Sbjct: 578 RAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLL 637

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
           + LC  +K++EA+++   + ++    N   +T I+  +I+ G+   A  LF   I   + 
Sbjct: 638 QALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHK 697

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
               +YTV I    + GR EEA  L  +M+   V P+  TY + +        I      
Sbjct: 698 PSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFST 757

Query: 555 LQDVIDARIELDYHTSIRLTKFIFKF 580
           L+ ++DA  E +  T   L K   K 
Sbjct: 758 LKRMVDASCEPNCWTYWLLLKHFLKM 783



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/418 (25%), Positives = 191/418 (45%), Gaps = 4/418 (0%)

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           +N+AL +L + +    +  +   +V++G  P+   +  ++  +CK G +A A++   L+ 
Sbjct: 147 YNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLR 206

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
             G  +       L+ G+ R   L  A +L   M   GC  N  +YT LI+G  EA+   
Sbjct: 207 ESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVR 266

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A   + M+  +G + +L  + +LI  L K G   DA  + D +    +VP  +T+ +++
Sbjct: 267 EALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMI 326

Query: 368 STVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
              C SGR      +   +E      D   YN+L+   C  G  ++A +L N  + +GFT
Sbjct: 327 DGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFT 385

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           P   +F  L+ G C A +ID+A+ V   ++ +N  ++   +  +++ LI+  R  +A + 
Sbjct: 386 PTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKET 445

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
                      +VV+YT  I G  + G    A  ++  M+H    PNA+TY  ++    +
Sbjct: 446 LNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQ 505

Query: 545 ERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
           ++ +     L+  + +  I     T   L +   K H   +A      M   GL PDE
Sbjct: 506 DKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDE 563



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 120/567 (21%), Positives = 232/567 (40%), Gaps = 64/567 (11%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D+Q++  +I+V+ +   R +  +  + E+   G      T+   +  Y +  M G  LE 
Sbjct: 422 DLQAYGVLINVLIK-KCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEV 480

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           F  M   G  PN +    ++  L +  ++   + ++ + Q     P  +++   +   CK
Sbjct: 481 FKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCK 540

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            ++  N   +  MM + G  P+ + + +L +  CK GR  EAY  L   +  G  L+   
Sbjct: 541 KHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---VRKGVVLTKVT 597

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T L+DGF +    D A  L EKMV  GC  ++ TY+ L++   + K  + A S LD + 
Sbjct: 598 YTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMT 657

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G   ++V + ++I  + K G +D A  +++ ++     P + T+   +S+ C  GR  
Sbjct: 658 VSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIE 717

Query: 378 LLPKLVCGLE---VEADLVVYNA-----------------------------------LL 399
               L+  +E   V  D+V YN                                    LL
Sbjct: 718 EAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLL 777

Query: 400 SYFCKAGFPNQAV----------------KLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
            +F K    N                   +L   M+  G  P   ++  ++ G C A ++
Sbjct: 778 KHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRL 837

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           +EA  +   ++  + + N  ++T ++    +     KA+      I   +   + SY   
Sbjct: 838 EEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYL 897

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           I GL + G  + A  L+  +  +    N   ++++     K  ++    +LL  + +   
Sbjct: 898 IVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHC 957

Query: 564 ELDYHTSIRLTKFIFKFHSSSSAVNQL 590
            +D  +   LT  I +  +S S V++L
Sbjct: 958 RIDSESYSMLTDSIRE--ASGSVVSEL 982



 Score = 45.4 bits (106), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 47/89 (52%)

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
           AIQ  RR   ++  L    Y +A+R LL    TE    LYS +    + P+  TY  M++
Sbjct: 128 AIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIM 187

Query: 541 SFCKERNIKMVKRLLQDVIDARIELDYHT 569
           ++CK+ ++ +  R    + ++ +++D +T
Sbjct: 188 AYCKKGSLAIAHRYFCLLRESGMQMDTYT 216


>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
          Length = 991

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 133/570 (23%), Positives = 243/570 (42%), Gaps = 58/570 (10%)

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
           + R GC    + F   +    +    G     FD M + G  P+    N ++    K+GR
Sbjct: 279 MKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGR 338

Query: 170 VD--LGIKVLKETQ--LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEI 225
           ++  L IK L E     P+  ++N  +  LC        ++++   V++GF P V  F  
Sbjct: 339 MNDALKIKELMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTN 397

Query: 226 LLNCFC-----------------------------------KMGRIAEAYQLLGLMITLG 250
           L+N +C                                   K  R+ EA +LL  +   G
Sbjct: 398 LINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANG 457

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
              +V  +T +IDG+ +  ++D+A  + + M ++GC PN  TY SL+ G ++ K    A 
Sbjct: 458 LVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAM 517

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
           + L  ++ +G  P+++ +  L+        +D+A  +++ + +  L PD + +  L   +
Sbjct: 518 ALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDAL 577

Query: 371 CLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           C +GR       +    V    V Y  L+  F KAG  + A  L   M+D+G TPD+Y++
Sbjct: 578 CKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTY 637

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             LL  LC  ++++EA+ +   + +         +T ++D ++  G+   A +++     
Sbjct: 638 SVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTS 697

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
             +     +YTV I    + GR E+A  L  +M+   V P+  TY +++        I  
Sbjct: 698 SGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDR 757

Query: 551 VKRLLQDVIDARIELDYHTSIRLTKFIFKFHSS------SSAVNQLVEMCNLGLIPDEMW 604
               L+ ++ A  E +Y T   L K + K + +      +S +  L+E+       D  W
Sbjct: 758 AFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIEL-------DITW 810

Query: 605 RKLGLLSDETMTPV-----SLFDGFVPCER 629
           + L  +    + P      SL  GF    R
Sbjct: 811 QLLERMVKHGLNPTVTTYSSLIAGFCKAGR 840



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 118/504 (23%), Positives = 223/504 (44%), Gaps = 31/504 (6%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D+Q F  +I+ + +   R +  + ++ E++  G V    T+   +  Y +     + LE 
Sbjct: 426 DLQVFGKLINSLIK-KDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEV 484

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
              M R G  PN +  N +M  L K  ++   + +L + Q    +PN +++   L   C 
Sbjct: 485 LKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCD 544

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            +D  N   +  MM + G  P+   + +L +  CK GR  EAY  +   +  G +L+   
Sbjct: 545 EHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI---VRKGVALTKVY 601

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T LIDGF +    D A  L E+M+  GC+P+  TY+ L+    + K  + A   LD + 
Sbjct: 602 YTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMS 661

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G    +  + +LID + + G +D A  +Y+ +      P + T+   +++ C  GR  
Sbjct: 662 LRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLE 721

Query: 378 LLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
               L+  +E E    D+V YN L+      G+ ++A      M+     P+ +++  LL
Sbjct: 722 DAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLL 781

Query: 435 R----------------GLCGARKIDEAINVYQGIVMN--NPAVNAHVHTAIVDRLIEAG 476
           +                G+    ++D    + + +V +  NP V    +++++    +AG
Sbjct: 782 KHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVT--TYSSLIAGFCKAG 839

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
           R  +A  L      +    +   YT+ I+   +    E+A    S M      P   +YR
Sbjct: 840 RLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYR 899

Query: 537 VMLLSFCKERNIKMVKRLLQDVID 560
           ++++  C E + + VK L  D+++
Sbjct: 900 LLVVGLCNEGDFEKVKSLFCDLLE 923



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 126/566 (22%), Positives = 235/566 (41%), Gaps = 56/566 (9%)

Query: 45  PIILAPHIVH--STLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFET 102
           P + A H+          P    AL+FF W A++  + H   S   ++ +++R     + 
Sbjct: 50  PSVTAAHVADLFRAESTAPEPATALAFFEWLARRDGFRHTADSHAALLHLLSRRRAPAQY 109

Query: 103 VRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMG--RFGFTPNTFA---R 157
            R +V  L    C   A+             +    ++A    G  R   +P  +    R
Sbjct: 110 ERLVVSML---NCSDTAEDM----------RVSADAIQAIRRTGSARLALSPKCYNFALR 156

Query: 158 NIV-MDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
           ++   D+   +GRV    +++++  LP+ +++N  + + CK  D++       +++  G 
Sbjct: 157 SLARFDMTEYMGRV--YSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGL 214

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
            P       L+  +C+ G + +A  L  +M  +G   +  ++T+LI G    + +  A  
Sbjct: 215 EPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALV 274

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           L+  M ++GCSPNV  +T LI G  ++     A    D +   G  P ++ +N +I   S
Sbjct: 275 LFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYS 334

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYN 396
           K+G  +DAL + + + +    PD +T                                YN
Sbjct: 335 KLGRMNDALKIKELMEKNGCHPDDWT--------------------------------YN 362

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            L+   C      +A +L N  + +GFTP   +F  L+ G C A K D+A+ +   ++ +
Sbjct: 363 TLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSS 421

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
              ++  V   +++ LI+  R  +A +L           +V++YT  I G  + G+ + A
Sbjct: 422 KCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIA 481

Query: 517 YILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKF 576
             +   M+     PNA+TY  ++    K++ +     LL  +    I  +  T   L + 
Sbjct: 482 LEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQG 541

Query: 577 IFKFHSSSSAVNQLVEMCNLGLIPDE 602
               H   +A      M   GL PDE
Sbjct: 542 QCDEHDFDNAFRLFEMMEQNGLKPDE 567



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/419 (24%), Positives = 186/419 (44%), Gaps = 30/419 (7%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIK-VLKETQLPNFLSFNIALCNLCKLND 200
           F+ M + G  P+  A  ++ D L K GR +     ++++      + +   +    K  +
Sbjct: 555 FEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGN 614

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
                 +I  M+ +G  P+   + +LL+  CK  R+ EA  +L  M   G   ++ A+T+
Sbjct: 615 TDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTI 674

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           LID   R  + D A  ++ +M  +G  P+  TYT  I  + +      A   +  +E EG
Sbjct: 675 LIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREG 734

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS-----------T 369
            APD+V +N+LID    MG  D A      ++     P+ +T+C LL            +
Sbjct: 735 VAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRS 794

Query: 370 VCLSGRFSLLPKLVCGLEVE--------ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
           V  SG ++L+   +    +E          +  Y++L++ FCKAG   +A  L + M  K
Sbjct: 795 VDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGK 854

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH-- 479
           G +P+   +  L++  C  +  ++A++     +M+       + +    RL+  G C+  
Sbjct: 855 GLSPNEDIYTLLIKCCCDTKFFEKALSFVS--IMSECGFQPQLESY---RLLVVGLCNEG 909

Query: 480 ---KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
              K   LF   +   Y  D V++ +   GLL+ G  +  + + S M+      ++ TY
Sbjct: 910 DFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTY 968



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 70/296 (23%), Positives = 118/296 (39%), Gaps = 55/296 (18%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG 173
           GC   + T+ + L    + +     L   D+M   G     FA  I++D + + G+ D  
Sbjct: 629 GCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHA 688

Query: 174 IKVLKET----QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
            ++  E       P+  ++ + + + CK   + + +D+I  M R+G  P+V  + IL++ 
Sbjct: 689 KRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDG 748

Query: 230 FCKMGRIAEAY------------------------------------------------- 240
              MG I  A+                                                 
Sbjct: 749 CGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDI 808

Query: 241 --QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIK 298
             QLL  M+  G + +V  ++ LI GF +  RL+ A  L + M   G SPN   YT LIK
Sbjct: 809 TWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIK 868

Query: 299 GFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
              + K F  A SF+ ++   G  P L  + +L+  L   G ++    ++  LLEL
Sbjct: 869 CCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLEL 924



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 73/319 (22%), Positives = 139/319 (43%), Gaps = 30/319 (9%)

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
           L  +G  PD V +N +I    K G    A   +  LLE  L P+++T  +L+   C +G 
Sbjct: 174 LVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGE 233

Query: 376 -------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
                  F ++P + C    + +   Y  L+   C+A    +A+ L+  M   G +P+  
Sbjct: 234 LRKACWLFLMMPLMGC----QRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVR 289

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
           +F  L+ GLC + ++ +A  ++  +  N    +   + A++    + GR + A+++  + 
Sbjct: 290 AFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKI--KE 347

Query: 489 IVEK---YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
           ++EK   +P D  +Y   I GL +  +TEEA  L +        P   T+  ++  +C  
Sbjct: 348 LMEKNGCHP-DDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMA 405

Query: 546 RNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWR 605
                  R+   ++ ++ +LD     +L   + K      A   L E+   GL+P+    
Sbjct: 406 EKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPN---- 461

Query: 606 KLGLLSDETMTPVSLFDGF 624
                    +T  S+ DG+
Sbjct: 462 --------VITYTSIIDGY 472


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 205/422 (48%), Gaps = 8/422 (1%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           FD M   G  PN +  NI++  L   G     + +L++ +     PN +++N  +    +
Sbjct: 178 FDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFR 237

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
             +V   + ++GMM   G  PN+  F  ++N  CK G++ +A ++   M+  G +    +
Sbjct: 238 AGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVS 297

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  L+ G+ +      A  ++ +M Q G  P+VVT+TSLI    +A     A + +  + 
Sbjct: 298 YNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMR 357

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G   + V    LID   K G  DDAL    G+ + ++ P    + +L++  C+ GR  
Sbjct: 358 ERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMD 417

Query: 378 LLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
              +L+  +E +    D+V Y+ ++S +CK    + A +L   ML+KG  PD  ++  L+
Sbjct: 418 EARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLI 477

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
           R LCG +++ +A  +++ ++      +   +T+++D   + G    A+ L  + +     
Sbjct: 478 RVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVL 537

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
            DVV+Y+V I GL +  R  EA  L  ++ H   P  A T    L+  C++  +K V  L
Sbjct: 538 PDVVTYSVLINGLSKSARAMEAQQLLFKLYH-EDPIPANTKYDALMHCCRKAELKSVLAL 596

Query: 555 LQ 556
           L+
Sbjct: 597 LK 598



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 101/391 (25%), Positives = 178/391 (45%), Gaps = 4/391 (1%)

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
           +P+ L++N  L  L   + +++ +     M+  G  PNV  + IL+   C  G   EA  
Sbjct: 153 VPSVLAYNAVLLALSDAS-LTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALS 211

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           +L  M   G   +V  +  L+  F R   +D A  L   M + G  PN+VT+ S++ G  
Sbjct: 212 ILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMC 271

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           +A     A    D +  EG APD V +N L+    K G   +AL V+  + +  ++PD  
Sbjct: 272 KAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVV 331

Query: 362 TFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           TF SL+  +C +G       LV  +    ++ + V + AL+  FCK GF + A+     M
Sbjct: 332 TFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGM 391

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
                 P    +  L+ G C   ++DEA  +   +       +   ++ I+    +    
Sbjct: 392 KQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDT 451

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
           H A +L ++ + +    D ++Y+  IR L    R  +A++L+  M  + + P+ +TY  +
Sbjct: 452 HSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSL 511

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
           +   CKE N++    L   ++ A +  D  T
Sbjct: 512 IDGHCKEGNVESALSLHDKMVKAGVLPDVVT 542



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 124/526 (23%), Positives = 226/526 (42%), Gaps = 24/526 (4%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWR-GEMYGMVLEAFDEMGRFGFTPNTFA 156
           G  +    I+ ++   GC     T+   +  ++R GE+ G        M   G  PN   
Sbjct: 204 GHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDG-AERLVGMMREGGLKPNLVT 262

Query: 157 RNIVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N +++ + K G+++   KV    ++E   P+ +S+N  +   CK         V   M 
Sbjct: 263 FNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMT 322

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
           +KG  P+V  F  L++  CK G +  A  L+  M   G  ++   +T LIDGF +   LD
Sbjct: 323 QKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLD 382

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A      M Q    P+VV Y +LI G+        A   L  +E++G  PD+V ++ +I
Sbjct: 383 DALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTII 442

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVE 389
               K      A ++   +LE  ++PD+ T+ SL+  +C   R S   +L K +  L ++
Sbjct: 443 SAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQ 502

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            D   Y +L+   CK G    A+ L++ M+  G  PD  ++  L+ GL  + +  EA  +
Sbjct: 503 PDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQL 562

Query: 450 -----YQGIVMNNPAVNAHVHT----------AIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
                ++  +  N   +A +H           A++      G  ++A ++++  +   + 
Sbjct: 563 LFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWN 622

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
           LD   Y+V I G    G   +A   + QM      PN+ +   ++    +   +    ++
Sbjct: 623 LDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQV 682

Query: 555 LQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           +Q +++     D   S  L        +  + ++ L  M   GL+P
Sbjct: 683 IQQLLNYCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLP 728



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/322 (22%), Positives = 152/322 (47%), Gaps = 4/322 (1%)

Query: 285 GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
           G  P+V+ Y +++    +A + S A  F D + S+G AP++  +N+L+  L   G   +A
Sbjct: 151 GYVPSVLAYNAVLLALSDASLTS-ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSY 401
           L +   +      P+  T+ +L++    +G      +LV  +    ++ +LV +N++++ 
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNG 269

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVN 461
            CKAG    A K+++ M+ +G  PD  S+  L+ G C A    EA++V+  +       +
Sbjct: 270 MCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 329

Query: 462 AHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYS 521
               T+++  + +AG   +A+ L R+       ++ V++T  I G  + G  ++A +   
Sbjct: 330 VVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 389

Query: 522 QMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFH 581
            MK   + P+   Y  ++  +C    +   + LL ++    ++ D  T   +     K  
Sbjct: 390 GMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNC 449

Query: 582 SSSSAVNQLVEMCNLGLIPDEM 603
            + SA     +M   G++PD +
Sbjct: 450 DTHSAFELNQQMLEKGVLPDAI 471


>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
          Length = 769

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 129/491 (26%), Positives = 215/491 (43%), Gaps = 45/491 (9%)

Query: 76  QRDYFHDVQSFDH----------MISVVTRLTGRFET-----VRGIVGELARVGCVIKAQ 120
           +  YF +  SF H          +++  T L+G  +       + I+  +   GC     
Sbjct: 288 EASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPS 347

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVM------DVLFKIGRVDLGI 174
            F   +  Y   + Y    +  + M   G  P     NI +      + L     +DL  
Sbjct: 348 LFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAE 407

Query: 175 KVLKETQLPNFLSFNIALCN----LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCF 230
           K+  E    N +   + + N    LC +        +I  M+RKGF P+   +  ++   
Sbjct: 408 KIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFL 467

Query: 231 CKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNV 290
           C   ++ +A+ L   M  +G +  V  +T+LID F +   ++ A +L+E+M   GCSP V
Sbjct: 468 CHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTV 527

Query: 291 VTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDG 350
           VTYT+LI  +++AK    A      +   G  P+ V +  L+D L K G+   A +VY  
Sbjct: 528 VTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAK 587

Query: 351 LLELKLVPDS--YTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFP 408
           L+      DS  Y  C          R +L P          ++V Y AL+   CKA   
Sbjct: 588 LIGTSDSADSDFYFPC--------EDRHTLAP----------NVVTYGALVDGLCKAHKV 629

Query: 409 NQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAI 468
           + A +L + ML  G  P++  +  L+ G C A KID A  V+  +       + H +T++
Sbjct: 630 DHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSL 689

Query: 469 VDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAV 528
           +DR+ + GR   A+++  + + +    +VV+YT  I GL   G +E+A  L S M+    
Sbjct: 690 IDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGC 749

Query: 529 PPNAYTYRVML 539
            PN  TY  ++
Sbjct: 750 SPNVVTYTALI 760



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 128/595 (21%), Positives = 231/595 (38%), Gaps = 64/595 (10%)

Query: 69  FFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRI 128
           FF+W  +Q  Y H    +D +   +    GR      ++ E+      +  +   + +R 
Sbjct: 125 FFLWAERQVGYSHTGACYDALADALG-FDGRARDAERLLREIGEEDREVLGRLLNVLVRR 183

Query: 129 YWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFL-- 186
             RG M+   LE    +  FG+ P+    N ++ VL   G+VDLG +V KE     F   
Sbjct: 184 CCRGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMD 243

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
            F +  C    L       D + M+ R+ F  +  +   +++   +     EA   L  M
Sbjct: 244 RFTVG-CFAHALCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRM 302

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
                  +V  +  L+ GF + ++L     +   M+  GC+PN   + SL+  +   K +
Sbjct: 303 RCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDY 362

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLID--------------------------------- 333
           + A+  L+ + + G  P  V +N+ I                                  
Sbjct: 363 AYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNK 422

Query: 334 --------CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKL 382
                   CL  +G +D A  +   ++    VPD+ T+  +++ +C + +     LL + 
Sbjct: 423 VNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQE 482

Query: 383 VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
           +  + V  D+  Y  L+  FCKAG   QA  L+  M   G +P   ++  L+     A++
Sbjct: 483 MKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQ 542

Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD------ 496
           + +A +++  +V      N   + A+VD L +AG   KA +++ + I      D      
Sbjct: 543 VPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFP 602

Query: 497 ----------VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
                     VV+Y   + GL +  + + A+ L   M      PN   Y  ++  FCK  
Sbjct: 603 CEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAG 662

Query: 547 NIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            I   + +   +         HT   L   +FK      A+  L +M      P+
Sbjct: 663 KIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPN 717



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 127/276 (46%), Gaps = 21/276 (7%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV ++  +I    +  G  E  + +  E+  VGC     T+   +  Y + +      + 
Sbjct: 491 DVYTYTILIDSFCK-AGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDI 549

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL--------------------KETQ 181
           F  M   G  PN      ++D L K G +    +V                     + T 
Sbjct: 550 FHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTL 609

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
            PN +++   +  LCK + V +  +++  M+  G  PN  +++ L++ FCK G+I  A +
Sbjct: 610 APNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQE 669

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           +   M   G   SV+ +T LID   +  RLD+A  +  +M+++ C+PNVVTYT++I G  
Sbjct: 670 VFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLC 729

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
                  A   L ++E +G +P++V +  LID L +
Sbjct: 730 RIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGQ 765



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 108/484 (22%), Positives = 194/484 (40%), Gaps = 68/484 (14%)

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIA 191
           G   +A D + R  F  +T     ++  L +    D  +  L   +    +PN +++   
Sbjct: 258 GRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTL 317

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           L    K   +   K +I MM+ +G  PN  +F  L++ +C     A AY+LL  M T G 
Sbjct: 318 LSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGC 377

Query: 252 SLSVNAWTVLID---GFRRLRR---LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
                 + + I    G  +L     LD+A  ++ +M+   C  N V   +  +       
Sbjct: 378 PPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGK 437

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
           F  AF  +  +  +G  PD   ++ +I  L      + A  ++  +  + + PD YT+  
Sbjct: 438 FDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTI 497

Query: 366 LLSTVCLSGR-------FSLLPKLVCGLEV------------------------------ 388
           L+ + C +G        F  +  + C   V                              
Sbjct: 498 LIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAG 557

Query: 389 -EADLVVYNALLSYFCKAGFPNQAVKLYNTML------DKGF----------TPDNYSFV 431
              + V Y AL+   CKAG  ++A ++Y  ++      D  F           P+  ++ 
Sbjct: 558 CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYG 617

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            L+ GLC A K+D A  +   ++ +    N  V+ A++D   +AG+   A ++F +    
Sbjct: 618 ALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKC 677

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK----ERN 547
            Y   V +YT  I  + + GR + A  + SQM   +  PN  TY  M+   C+    E+ 
Sbjct: 678 GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKA 737

Query: 548 IKMV 551
           +K++
Sbjct: 738 LKLL 741


>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1084

 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 133/527 (25%), Positives = 239/527 (45%), Gaps = 55/527 (10%)

Query: 78  DYFHDVQSFDHMISVVTR---LTGRFETVRGIVGELARV-------GCVIKAQTFLLFLR 127
           D  H ++S   + +VVT    L+G     +G +G   R+       GC    + F   + 
Sbjct: 300 DILHRMRSSSCIPNVVTYRILLSGCLR--KGQLGRCKRILSMMITEGCYPNREIFNSLIH 357

Query: 128 IYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVM------------DVLFKIGR-----V 170
            Y +   Y    + F +M + G  P     NI +            D+L  + +     +
Sbjct: 358 AYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEML 417

Query: 171 DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCF 230
           DLG+ VL +  + NF     A C LC          +I  M+ KGF P+   +  ++   
Sbjct: 418 DLGV-VLNKVNVSNF-----ARC-LCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFL 470

Query: 231 CKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNV 290
           C   ++ +A+ L   M   G   SV  +T+LID F +   +  A   +++M+  GC+PNV
Sbjct: 471 CDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNV 530

Query: 291 VTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVY-- 348
           VTYT+LI  +++AK   +A    +M+  EG  P++V +  LID   K G  + A  +Y  
Sbjct: 531 VTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYAR 590

Query: 349 ----------DGLLELKLV----PDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEAD 391
                     D   +L       P+  T+ +L+  +C + R     +L+  +     E +
Sbjct: 591 MRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPN 650

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
            +VY+A++  FCK G    A +++  M ++G++P+ Y++   +  L    ++D  + V  
Sbjct: 651 QIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLS 710

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
            ++ N+   N  ++T +VD L + G+  +A +L  +   +    +VV+YT  I G  + G
Sbjct: 711 KMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSG 770

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           + E+   L+  M      PN  TYRV++   C    +    +LL ++
Sbjct: 771 KIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEM 817



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 135/588 (22%), Positives = 243/588 (41%), Gaps = 100/588 (17%)

Query: 40  THQ---DFPIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVV--- 93
           THQ    F   L   +V   + N  +  + + FF+W  +Q  Y H  Q FD ++ ++   
Sbjct: 93  THQFFRQFRNQLNDSLVVEVMNNVKNPELCVKFFLWAGRQIGYSHTPQVFDKLLDLLGCN 152

Query: 94  ----TRLTGRF---------ETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLE 140
                R+  +F         E +R ++  L R  C               R   + M LE
Sbjct: 153 VNADDRVPLKFLMEIKDDDHELLRRLLNFLVRKCC---------------RNGWWNMALE 197

Query: 141 AFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ------------------- 181
               +  FG+ P+    N ++ V  +  ++D    V +E                     
Sbjct: 198 ELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLC 257

Query: 182 ------------------LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMF 223
                             +P+ + +N  +  LC+ +      D++  M      PNV  +
Sbjct: 258 KGGKCREAFDLIDEAEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTY 317

Query: 224 EILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQ 283
            ILL+   + G++    ++L +MIT G   +   +  LI  + + R    A  L++KM++
Sbjct: 318 RILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIK 377

Query: 284 NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE---SEGHAPDLVFHNVLID----CLS 336
            GC P  + Y   I G + +     +   LD++E   SE     +V + V +     CL 
Sbjct: 378 CGCQPGYLVYNIFI-GSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLC 436

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADL 392
             G +D A  +   ++    VPD  T+  ++  +C + +    FSL  ++     V + +
Sbjct: 437 GAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPS-V 495

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
             Y  L+  FCKAG   QA K ++ ML KG TP+  ++  L+     A+++  A  +++ 
Sbjct: 496 YTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEM 555

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR-------AIVEKY-PLD-------- 496
           +++     N   +TA++D   +AG+  KA Q++ R       + ++KY  LD        
Sbjct: 556 MLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPN 615

Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
           V++Y   + GL +  R +EA+ L   M      PN   Y  ++  FCK
Sbjct: 616 VITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCK 663



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 90/445 (20%), Positives = 198/445 (44%), Gaps = 27/445 (6%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
            G  +  R    E+   GC     T+   +  Y + +   +  E F+ M   G  PN   
Sbjct: 508 AGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVT 567

Query: 157 RNIVMDVLFKIGRVDLGIKVL--------------------KETQLPNFLSFNIALCNLC 196
              ++D   K G+++   ++                        + PN +++   +  LC
Sbjct: 568 YTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLC 627

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
           K N V    +++  M+  G  PN  +++ +++ FCK+G++ +A ++   M   G S ++ 
Sbjct: 628 KANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLY 687

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
            ++  ID   +  RLD+   +  KM++N C+PNVV YT ++ G  +      A+  +  +
Sbjct: 688 TYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKM 747

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
           E +G  P++V +  +ID   K G  +  L+++  +      P+  T+  L++  C +G  
Sbjct: 748 EEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLL 807

Query: 377 SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQ---AVKLYNTMLDKGFTPDNYSFVGL 433
               KL+   E++      + L       GF  +   ++ L + + +    P +  +  L
Sbjct: 808 DEAYKLL--DEMKQTYWPKHILSHRKIIEGFSQEFITSIGLLDELSENESVPVDSLYRIL 865

Query: 434 LRGLCGARKIDEAINVYQGIVM--NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
           +     A +++ A+++ + I    ++   N +++ ++++ L  A +  KA++L+   I +
Sbjct: 866 IDNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYASLIENLSHASKVDKALELYASMISK 925

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEA 516
               ++      I+GL++  + +EA
Sbjct: 926 NVVPELSILVHLIKGLIKVDKWQEA 950



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 81/323 (25%), Positives = 149/323 (46%), Gaps = 11/323 (3%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNL 195
           E  D M   G  PN    + V+D   KIG++    ++  K+ +    PN  +++  +  L
Sbjct: 637 ELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCL 696

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
            K N +  V  V+  M+     PNV ++  +++  CK+G+  EAY+L+  M   G + +V
Sbjct: 697 FKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNV 756

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
             +T +IDGF +  +++    L+  M   GC+PN +TY  LI       +   A+  LD 
Sbjct: 757 VTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDE 816

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
           ++       ++ H  +I+  S+   +  ++ + D L E + VP    +  L+     +GR
Sbjct: 817 MKQTYWPKHILSHRKIIEGFSQ--EFITSIGLLDELSENESVPVDSLYRILIDNYIKAGR 874

Query: 376 FSLLPKLVCGLEVEADLVV-----YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
             +   L+  +       V     Y +L+     A   ++A++LY +M+ K   P+    
Sbjct: 875 LEVALDLLEEISSSPSHAVSNKYLYASLIENLSHASKVDKALELYASMISKNVVPELSIL 934

Query: 431 VGLLRGLCGARKIDEAINVYQGI 453
           V L++GL    K  EA+ +   I
Sbjct: 935 VHLIKGLIKVDKWQEALQLSDSI 957



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 75/344 (21%), Positives = 137/344 (39%), Gaps = 52/344 (15%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G+ +  + +  +++  G      T+  F+   ++     +VL+   +M     TPN    
Sbjct: 665 GKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIY 724

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
             ++D L KIG+ D   K++ + +     PN +++   +    K   +    ++   M  
Sbjct: 725 TEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCS 784

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLL------------------------------ 243
           KG  PN   + +L+N  C  G + EAY+LL                              
Sbjct: 785 KGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQEFITSI 844

Query: 244 GLMITLGTSLSV---NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSP--NVVTYTSLIK 298
           GL+  L  + SV   + + +LID + +  RL++A  L E++  +      N   Y SLI+
Sbjct: 845 GLLDELSENESVPVDSLYRILIDNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYASLIE 904

Query: 299 GFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL-- 356
               A     A      + S+   P+L     LI  L K+  + +AL + D + ++ +  
Sbjct: 905 NLSHASKVDKALELYASMISKNVVPELSILVHLIKGLIKVDKWQEALQLSDSICQMDIHW 964

Query: 357 VPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLS 400
           + +  T           GR   + KLV    VEA+  V   +L 
Sbjct: 965 LQEKAT-----------GRTEEMVKLVIAAMVEAETGVSEEILE 997



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 77/164 (46%), Gaps = 2/164 (1%)

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
           N L+   C+ G+ N A++    + D G+ P   ++  L++    A K+D A  V + ++ 
Sbjct: 180 NFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLS 239

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
               ++ +  +     L + G+C +A  L   A  E +  D V Y   + GL E    EE
Sbjct: 240 YAFVMDRYTLSCFAYSLCKGGKCREAFDLIDEA--EDFVPDTVFYNRMVSGLCEASLFEE 297

Query: 516 AYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           A  +  +M+  +  PN  TYR++L    ++  +   KR+L  +I
Sbjct: 298 AMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMI 341



 Score = 45.8 bits (107), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 56/305 (18%), Positives = 112/305 (36%), Gaps = 13/305 (4%)

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
           +++A   L  L+  G+ P    +N LI    +    D A  V   +L    V D YT   
Sbjct: 192 WNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSC 251

Query: 366 LLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
              ++C  G+    F L+ +     +   D V YN ++S  C+A    +A+ + + M   
Sbjct: 252 FAYSLCKGGKCREAFDLIDE---AEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSS 308

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
              P+  ++  LL G     ++     +   ++      N  +  +++    ++     A
Sbjct: 309 SCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYA 368

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL------YSQMKHIAVPPNAYTY 535
            +LF++ I        + Y + I  +        + IL      YS+M  + V  N    
Sbjct: 369 YKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNV 428

Query: 536 RVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCN 595
                  C         +++ +++      D  T  ++  F+        A +   EM  
Sbjct: 429 SNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKR 488

Query: 596 LGLIP 600
            G++P
Sbjct: 489 NGIVP 493


>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
          Length = 876

 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 133/570 (23%), Positives = 243/570 (42%), Gaps = 58/570 (10%)

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
           + R GC    + F   +    +    G     FD M + G  P+    N ++    K+GR
Sbjct: 164 MKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGR 223

Query: 170 VD--LGIKVLKETQ--LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEI 225
           ++  L IK L E     P+  ++N  +  LC        ++++   V++GF P V  F  
Sbjct: 224 MNDALKIKELMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTN 282

Query: 226 LLNCFC-----------------------------------KMGRIAEAYQLLGLMITLG 250
           L+N +C                                   K  R+ EA +LL  +   G
Sbjct: 283 LINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANG 342

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
              +V  +T +IDG+ +  ++D+A  + + M ++GC PN  TY SL+ G ++ K    A 
Sbjct: 343 LVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAM 402

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
           + L  ++ +G  P+++ +  L+        +D+A  +++ + +  L PD + +  L   +
Sbjct: 403 ALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDAL 462

Query: 371 CLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           C +GR       +    V    V Y  L+  F KAG  + A  L   M+D+G TPD+Y++
Sbjct: 463 CKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTY 522

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             LL  LC  ++++EA+ +   + +         +T ++D ++  G+   A +++     
Sbjct: 523 SVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTS 582

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
             +     +YTV I    + GR E+A  L  +M+   V P+  TY +++        I  
Sbjct: 583 SGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDR 642

Query: 551 VKRLLQDVIDARIELDYHTSIRLTKFIFKFHSS------SSAVNQLVEMCNLGLIPDEMW 604
               L+ ++ A  E +Y T   L K + K + +      +S +  L+E+       D  W
Sbjct: 643 AFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIEL-------DITW 695

Query: 605 RKLGLLSDETMTPV-----SLFDGFVPCER 629
           + L  +    + P      SL  GF    R
Sbjct: 696 QLLERMVKHGLNPTVTTYSSLIAGFCKAGR 725



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 118/504 (23%), Positives = 223/504 (44%), Gaps = 31/504 (6%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D+Q F  +I+ + +   R +  + ++ E++  G V    T+   +  Y +     + LE 
Sbjct: 311 DLQVFGKLINSLIK-KDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEV 369

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
              M R G  PN +  N +M  L K  ++   + +L + Q    +PN +++   L   C 
Sbjct: 370 LKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCD 429

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            +D  N   +  MM + G  P+   + +L +  CK GR  EAY  +   +  G +L+   
Sbjct: 430 EHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI---VRKGVALTKVY 486

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T LIDGF +    D A  L E+M+  GC+P+  TY+ L+    + K  + A   LD + 
Sbjct: 487 YTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMS 546

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G    +  + +LID + + G +D A  +Y+ +      P + T+   +++ C  GR  
Sbjct: 547 LRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLE 606

Query: 378 LLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
               L+  +E E    D+V YN L+      G+ ++A      M+     P+ +++  LL
Sbjct: 607 DAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLL 666

Query: 435 R----------------GLCGARKIDEAINVYQGIVMN--NPAVNAHVHTAIVDRLIEAG 476
           +                G+    ++D    + + +V +  NP V    +++++    +AG
Sbjct: 667 KHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVT--TYSSLIAGFCKAG 724

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
           R  +A  L      +    +   YT+ I+   +    E+A    S M      P   +YR
Sbjct: 725 RLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYR 784

Query: 537 VMLLSFCKERNIKMVKRLLQDVID 560
           ++++  C E + + VK L  D+++
Sbjct: 785 LLVVGLCNEGDFEKVKSLFCDLLE 808



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 106/455 (23%), Positives = 196/455 (43%), Gaps = 38/455 (8%)

Query: 148 FGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDV 207
           + F   + AR    D+   +GRV    +++++  LP+ +++N  + + CK  D++     
Sbjct: 36  YNFALRSLAR---FDMTEYMGRV--YSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRY 90

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
             +++  G  P       L+  +C+ G + +A  L  +M  +G   +  ++T+LI G   
Sbjct: 91  FRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCD 150

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
            + +  A  L+  M ++GCSPNV  +T LI G  ++     A    D +   G  P ++ 
Sbjct: 151 AKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMT 210

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE 387
           +N +I   SK+G  +DAL + + + +    PD +T                         
Sbjct: 211 YNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWT------------------------- 245

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
                  YN L+   C      +A +L N  + +GFTP   +F  L+ G C A K D+A+
Sbjct: 246 -------YNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDAL 297

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            +   ++ +   ++  V   +++ LI+  R  +A +L           +V++YT  I G 
Sbjct: 298 RMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGY 357

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
            + G+ + A  +   M+     PNA+TY  ++    K++ +     LL  +    I  + 
Sbjct: 358 CKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNV 417

Query: 568 HTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
            T   L +     H   +A      M   GL PDE
Sbjct: 418 ITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDE 452



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 101/419 (24%), Positives = 186/419 (44%), Gaps = 30/419 (7%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIK-VLKETQLPNFLSFNIALCNLCKLND 200
           F+ M + G  P+  A  ++ D L K GR +     ++++      + +   +    K  +
Sbjct: 440 FEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGN 499

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
                 +I  M+ +G  P+   + +LL+  CK  R+ EA  +L  M   G   ++ A+T+
Sbjct: 500 TDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTI 559

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           LID   R  + D A  ++ +M  +G  P+  TYT  I  + +      A   +  +E EG
Sbjct: 560 LIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREG 619

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS-----------T 369
            APD+V +N+LID    MG  D A      ++     P+ +T+C LL            +
Sbjct: 620 VAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRS 679

Query: 370 VCLSGRFSLLPKLVCGLEVE--------ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
           V  SG ++L+   +    +E          +  Y++L++ FCKAG   +A  L + M  K
Sbjct: 680 VDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGK 739

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH-- 479
           G +P+   +  L++  C  +  ++A++     +M+       + +    RL+  G C+  
Sbjct: 740 GLSPNEDIYTLLIKCCCDTKFFEKALSFVS--IMSECGFQPQLESY---RLLVVGLCNEG 794

Query: 480 ---KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
              K   LF   +   Y  D V++ +   GLL+ G  +  + + S M+      ++ TY
Sbjct: 795 DFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTY 853



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/296 (23%), Positives = 118/296 (39%), Gaps = 55/296 (18%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG 173
           GC   + T+ + L    + +     L   D+M   G     FA  I++D + + G+ D  
Sbjct: 514 GCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHA 573

Query: 174 IKVLKET----QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
            ++  E       P+  ++ + + + CK   + + +D+I  M R+G  P+V  + IL++ 
Sbjct: 574 KRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDG 633

Query: 230 FCKMGRIAEAY------------------------------------------------- 240
              MG I  A+                                                 
Sbjct: 634 CGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDI 693

Query: 241 --QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIK 298
             QLL  M+  G + +V  ++ LI GF +  RL+ A  L + M   G SPN   YT LIK
Sbjct: 694 TWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIK 753

Query: 299 GFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
              + K F  A SF+ ++   G  P L  + +L+  L   G ++    ++  LLEL
Sbjct: 754 CCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLEL 809



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/319 (22%), Positives = 138/319 (43%), Gaps = 30/319 (9%)

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
           L  +G  PD V +N +I    K G    A   +  LLE  L P+++T  +L+   C +G 
Sbjct: 59  LVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGE 118

Query: 376 -------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
                  F ++P + C    + +   Y  L+   C A    +A+ L+  M   G +P+  
Sbjct: 119 LRKACWLFLMMPLMGC----QRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVR 174

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
           +F  L+ GLC + ++ +A  ++  +  N    +   + A++    + GR + A+++  + 
Sbjct: 175 AFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKI--KE 232

Query: 489 IVEK---YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
           ++EK   +P D  +Y   I GL +  +TEEA  L +        P   T+  ++  +C  
Sbjct: 233 LMEKNGCHP-DDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMA 290

Query: 546 RNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWR 605
                  R+   ++ ++ +LD     +L   + K      A   L E+   GL+P+    
Sbjct: 291 EKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPN---- 346

Query: 606 KLGLLSDETMTPVSLFDGF 624
                    +T  S+ DG+
Sbjct: 347 --------VITYTSIIDGY 357



 Score = 44.7 bits (104), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 42/89 (47%)

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
           AIQ  RR    +  L    Y  A+R L     TE    +YSQ+    + P+  TY  M+ 
Sbjct: 17  AIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIK 76

Query: 541 SFCKERNIKMVKRLLQDVIDARIELDYHT 569
           S+CKE ++    R  + +++  +E +  T
Sbjct: 77  SYCKEGDLTTAHRYFRLLLEGGLEPETFT 105


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 116/482 (24%), Positives = 225/482 (46%), Gaps = 15/482 (3%)

Query: 77  RDYFHD-----VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWR 131
           RD  H      V  F  + S + + T +++ V  +  ++   G      T  + +  + R
Sbjct: 77  RDMIHSRPLPTVIDFSRLFSAIAK-TKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCR 135

Query: 132 GEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLS 187
                +   A  ++ + G+ PNT   + +++ L   GRV    +L  ++++    P+ ++
Sbjct: 136 CRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLIT 195

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
            N  +  LC     +    +I  MV  G  PN   +  +LN  CK G+ A A +LL  M 
Sbjct: 196 INTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKME 255

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
                L    ++++IDG  +   LD A  L+ +M   G + N++TY  LI GF  A  + 
Sbjct: 256 ERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWD 315

Query: 308 IAFSFL-DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
                L DM++ + + P++V  +VLID   K G   +A +++  ++   + PD+ T+ SL
Sbjct: 316 DGAKLLRDMIKRKIN-PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 374

Query: 367 LSTVCLSG---RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           +   C      + + +  L+     + ++  +N L++ +CKA   +  ++L+  M  +G 
Sbjct: 375 IDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV 434

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
             D  ++  L++G C   K++ A  ++Q +V      N   +  ++D L + G   KA++
Sbjct: 435 VADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALE 494

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           +F +    K  LD+  Y + I G+    + ++A+ L+  +    V P   TY +M+   C
Sbjct: 495 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLC 554

Query: 544 KE 545
           K+
Sbjct: 555 KK 556



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/408 (24%), Positives = 196/408 (48%), Gaps = 7/408 (1%)

Query: 166 KIGRVDLGIKVLKETQLP----NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
           K  + DL + + K+ +L     N  + +I +   C+   +      +G +++ G+ PN  
Sbjct: 100 KTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTI 159

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            F  L+N  C  GR++EA +L+  M+ +G    +     L++G     +   A  L +KM
Sbjct: 160 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKM 219

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
           V+ GC PN VTY  ++    ++   ++A   L  +E      D V ++++ID L K GS 
Sbjct: 220 VEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSL 279

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNAL 398
           D+A ++++ +    +  +  T+  L+   C +GR+    KL+  +   ++  ++V ++ L
Sbjct: 280 DNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVL 339

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           +  F K G   +A +L+  M+ +G  PD  ++  L+ G C    +D+A  +   +V    
Sbjct: 340 IDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGC 399

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
             N      +++   +A R    ++LFR+  +     D V+Y   I+G  E G+   A  
Sbjct: 400 DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKE 459

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           L+ +M    VPPN  TY+++L   C     +    + + +  +++ELD
Sbjct: 460 LFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELD 507



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 108/432 (25%), Positives = 204/432 (47%), Gaps = 36/432 (8%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF----LSFNIALCNLCK 197
            D+M  +G  PN      V++V+ K G+  L +++L++ +  N     + ++I +  LCK
Sbjct: 216 IDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              + N  ++   M  KG   N+  + IL+  FC  GR  +  +LL  MI    + +V  
Sbjct: 276 HGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT 335

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           ++VLID F +  +L  A  L ++M+  G +P+ +TYTSLI GF +      A   +D++ 
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
           S+G  P++   N+LI+   K    DD L+++                     + L G   
Sbjct: 396 SKGCDPNIRTFNILINGYCKANRIDDGLELF-------------------RKMSLRG--- 433

Query: 378 LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
                     V AD V YN L+  FC+ G  N A +L+  M+ +   P+  ++  LL GL
Sbjct: 434 ----------VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGL 483

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
           C   + ++A+ +++ I  +   ++  ++  I+  +  A +   A  LF    ++     V
Sbjct: 484 CDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGV 543

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
            +Y + I GL + G   EA +L+ +M+     P+ +TY +++ +   + +     +L+++
Sbjct: 544 KTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEE 603

Query: 558 VIDARIELDYHT 569
           +      +D  T
Sbjct: 604 LKRCGFSVDAST 615



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/438 (21%), Positives = 206/438 (47%), Gaps = 10/438 (2%)

Query: 121 TFLLFLRIY---WRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI--- 174
           T + F R++    + + Y +VL    +M   G   N +  +I+++   +  ++ L     
Sbjct: 87  TVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAM 146

Query: 175 -KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKM 233
            K++K    PN ++F+  +  LC    VS   +++  MV  G  P++     L+N  C  
Sbjct: 147 GKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLS 206

Query: 234 GRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTY 293
           G+ AEA  L+  M+  G   +   +  +++   +  +  +A  L  KM +     + V Y
Sbjct: 207 GKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266

Query: 294 TSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE 353
           + +I G  +      AF+  + +E +G   +++ +N+LI      G +DD   +   +++
Sbjct: 267 SIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIK 326

Query: 354 LKLVPDSYTFCSLLSTVCLSGRF---SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQ 410
            K+ P+  TF  L+ +    G+      L K +    +  D + Y +L+  FCK    ++
Sbjct: 327 RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDK 386

Query: 411 AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
           A ++ + M+ KG  P+  +F  L+ G C A +ID+ + +++ + +     +   +  ++ 
Sbjct: 387 ANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQ 446

Query: 471 RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
              E G+ + A +LF+  +  K P ++V+Y + + GL + G +E+A  ++ +++   +  
Sbjct: 447 GFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMEL 506

Query: 531 NAYTYRVMLLSFCKERNI 548
           +   Y +++   C    +
Sbjct: 507 DIGIYNIIIHGMCNASKV 524



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/430 (22%), Positives = 196/430 (45%), Gaps = 8/430 (1%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           L+G+      ++ ++   GC   A T+   L +  +     + +E   +M       +  
Sbjct: 205 LSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAV 264

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKETQLP----NFLSFNIALCNLCKLNDVSNVKDVIGMM 211
             +I++D L K G +D    +  E ++     N +++NI +   C      +   ++  M
Sbjct: 265 KYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM 324

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
           +++   PNV  F +L++ F K G++ EA +L   MI  G +     +T LIDGF +   L
Sbjct: 325 IKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHL 384

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           D A  + + MV  GC PN+ T+  LI G+ +A            +   G   D V +N L
Sbjct: 385 DKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTL 444

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---V 388
           I    ++G  + A +++  ++  K+ P+  T+  LL  +C +G      ++   +E   +
Sbjct: 445 IQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKM 504

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
           E D+ +YN ++   C A   + A  L+ ++  KG  P   ++  ++ GLC    + EA  
Sbjct: 505 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAEL 564

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           +++ +  +  A +   +  ++   +  G   K+++L        + +D  +  + I  +L
Sbjct: 565 LFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVI-DML 623

Query: 509 EGGRTEEAYI 518
             GR +++++
Sbjct: 624 SDGRLKKSFL 633



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 93/382 (24%), Positives = 183/382 (47%), Gaps = 25/382 (6%)

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
           +V  ++ L     + ++ D+   L ++M   G + N+ T + +I  F   +   +AFS +
Sbjct: 87  TVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAM 146

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
             +   G+ P+ +  + LI+ L   G   +AL++ D ++E+   PD  T  +L++ +CLS
Sbjct: 147 GKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLS 206

Query: 374 GRFS----LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
           G+ +    L+ K+V     + + V Y  +L+  CK+G    A++L   M ++    D   
Sbjct: 207 GKEAEAMLLIDKMV-EYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265

Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
           +  ++ GLC    +D A N++  + M     N   +  ++     AGR     +L R  I
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
             K   +VV+++V I   ++ G+  EA  L+ +M H  + P+  TY  ++  FCKE ++ 
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385

Query: 550 MVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKL-- 607
              ++    +D  +      +IR    +   +  ++ ++        GL   E++RK+  
Sbjct: 386 KANQM----VDLMVSKGCDPNIRTFNILINGYCKANRIDD-------GL---ELFRKMSL 431

Query: 608 -GLLSDETMTPVSLFDGFVPCE 628
            G+++D T+T  +L  GF  CE
Sbjct: 432 RGVVAD-TVTYNTLIQGF--CE 450


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 130/460 (28%), Positives = 215/460 (46%), Gaps = 16/460 (3%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDV 207
           P+ F   I++  L +  +++   ++L   +    +P+   +N  +    K  D       
Sbjct: 8   PDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKF 67

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
           +  MV+    P V  +  +++  CK GR  +A +LL  M   G S ++  + V+++G   
Sbjct: 68  LAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCE 127

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
            R+LD A  + E+M   G  P+VVTY S IKG  +      A  FL  +      PD+V 
Sbjct: 128 ERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPV---TPDVVS 184

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLV 383
           +  +I+ L K G  D A  + D +      PD  T+ SL+   C  G       LL  ++
Sbjct: 185 YTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSML 244

Query: 384 CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
             L    ++V YN+LL    + G   +A  +   M  +GFTPD  S+   + GLC A ++
Sbjct: 245 -KLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERV 303

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL-DVVSYTV 502
            +A  V+  +V      NA  ++ +V+ L +      AI L  +A  EKY + D++ YTV
Sbjct: 304 KKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQA-REKYQIVDILLYTV 362

Query: 503 AIRGLLEGGRTEEAYILYSQ-MKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
            + GL +GGR +EA  L+S+ +      P+ + Y VML S CK R I    ++ + +++ 
Sbjct: 363 LLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLE- 421

Query: 562 RIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           R   +  T   L   +      S A   L+ M + G IPD
Sbjct: 422 RNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPD 461



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 130/584 (22%), Positives = 244/584 (41%), Gaps = 90/584 (15%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           + + E  R ++G +  +GCV     +   +  Y + + +G   +   EM +    P    
Sbjct: 23  SNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVT 82

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
              ++D L K GR    +K+L E +     PN  ++N+ +  LC+   +   K ++  M 
Sbjct: 83  YTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMA 142

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
            +G++P+V  +   +   CK  R+ EA + L  M     +  V ++T +I+G  +   LD
Sbjct: 143 VRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLD 199

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML---------------- 316
            A  + ++M   GC+P+VVTY+SLI GF +      A   LD +                
Sbjct: 200 SASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLL 259

Query: 317 -------------------ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
                              E  G  PD+V +N  ID L K      A  V+D ++E    
Sbjct: 260 GALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCT 319

Query: 358 PDSYTF-------CS----------------------------LLSTVCLSGRF----SL 378
           P++ ++       C                             LL  +C  GRF    +L
Sbjct: 320 PNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACAL 379

Query: 379 LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
             K++     E D+  YN +L   CK    ++A++++  ML++    +  ++  L+ GLC
Sbjct: 380 FSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCC-NVVTWNILVHGLC 438

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
              ++ +A  +   +V      +   +  +VD + + G+   A++LF  A+      DVV
Sbjct: 439 VDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVV 498

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           +Y+  I GL+     EEAY+L++++       +   +  M+L + +  +  +  +L  ++
Sbjct: 499 TYSALITGLVHENMAEEAYLLFTKL-------DVALWNAMILGYAENGSGDLGLKLFVEL 551

Query: 559 IDARIELDYHT-SIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           I++ +E +  T    ++  + K  S   A          G  PD
Sbjct: 552 IESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPD 595



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 87/338 (25%), Positives = 163/338 (48%)

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M+ K   P+   F ILL   C+  ++ +A QLLG M  +G       +  LI G+ + + 
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
              A     +MV+N C P VVTYT+++ G  +A     A   LD +  +G +P++  +NV
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA 390
           +++ L +    D+A  + + +      PD  T+ S +  +C   R     K +  + V  
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTP 180

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           D+V Y  +++  CK+G  + A ++ + M ++G TPD  ++  L+ G C   +++ A+ + 
Sbjct: 181 DVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLL 240

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
             ++      N   + +++  L   G   KA  +        +  DVVSY   I GL + 
Sbjct: 241 DSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKA 300

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
            R ++A  ++ +M      PNA +Y +++   CK++ +
Sbjct: 301 ERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKEL 338



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 96/448 (21%), Positives = 189/448 (42%), Gaps = 53/448 (11%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV S+  +I+ + + +G  ++   ++ ++   GC     T+   +  + +G      +  
Sbjct: 181 DVVSYTTVINGLCK-SGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGL 239

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCK 197
            D M + G  PN  A N ++  L ++G +    D+ +++ +    P+ +S+N  +  LCK
Sbjct: 240 LDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCK 299

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              V   K V   MV +G  PN   + +L+   CK   + +A  L+         + +  
Sbjct: 300 AERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILL 359

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNG-CSP---------------------------- 288
           +TVL+DG  +  R D A  L+ K++    C P                            
Sbjct: 360 YTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQM 419

Query: 289 ------NVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
                 NVVT+  L+ G       S A + L  +  EG  PD V +  L+D + K G   
Sbjct: 420 LERNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSA 479

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVC----LSGRFSLLPKLVCGLEVEADLVVYNAL 398
            AL++++  ++   VPD  T+ +L++ +         + L  KL        D+ ++NA+
Sbjct: 480 AALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKL--------DVALWNAM 531

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG-LCGARKIDEAINVYQGIVMNN 457
           +  + + G  +  +KL+  +++    P+  +F   + G L  A  + +A  ++   V   
Sbjct: 532 ILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAVKGG 591

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
              +  V   ++D   + G   +A ++F
Sbjct: 592 FFPDLFVANTLIDVFAKCGDLEEARRIF 619


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 118/505 (23%), Positives = 229/505 (45%), Gaps = 18/505 (3%)

Query: 77  RDYFHD-----VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWR 131
           RD  H      V  F  + S + + T +++ V  +  ++   G      T  + +  + R
Sbjct: 175 RDMIHSRPLPTVIDFSRLFSAIAK-TKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCR 233

Query: 132 GEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLS 187
                +   A  ++ + G+ PNT   + +++ L   GRV    +L  ++++    P+ ++
Sbjct: 234 CRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLIT 293

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
            N  +  LC     +    +I  MV  G  PN   +  +LN  CK G+ A A +LL  M 
Sbjct: 294 INTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKME 353

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
                L    ++++IDG  +   LD A  L+ +M   G + N++TY  LI GF  A  + 
Sbjct: 354 ERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWD 413

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
                L  +      P++V  +VLID   K G   +A +++  ++   + PD+ T+ SL+
Sbjct: 414 DGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLI 473

Query: 368 STVCLSG---RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
              C      + + +  L+     + ++  +N L++ +CKA   +  ++L+  M  +G  
Sbjct: 474 DGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVV 533

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
            D  ++  L++G C   K++ A  ++Q +V      N   +  ++D L + G   KA+++
Sbjct: 534 ADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEI 593

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
           F +    K  LD+  Y + I G+    + ++A+ L+  +    V P   TY +M+   CK
Sbjct: 594 FEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCK 653

Query: 545 ERNIKMVKRLLQDVIDARIELDYHT 569
           +  +   + L +     ++E D H 
Sbjct: 654 KGPLSEAELLFR-----KMEEDGHA 673



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 115/468 (24%), Positives = 217/468 (46%), Gaps = 46/468 (9%)

Query: 133 EMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF----LSF 188
           E   M+L   D+M  +G  PN      V++V+ K G+  L +++L++ +  N     + +
Sbjct: 307 EAEAMLL--IDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 364

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           +I +  LCK   + N  ++   M  KG   N+  + IL+  FC  GR  +  +LL  MI 
Sbjct: 365 SIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIK 424

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
              + +V  ++VLID F +  +L  A  L ++M+  G +P+ +TYTSLI GF +      
Sbjct: 425 RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDK 484

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A   +D++ S+G  P++   N+LI+   K    DD L+++                    
Sbjct: 485 ANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF-------------------R 525

Query: 369 TVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
            + L G             V AD V YN L+  FC+ G  N A +L+  M+ +   P+  
Sbjct: 526 KMSLRG-------------VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIV 572

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
           ++  LL GLC   + ++A+ +++ I  +   ++  ++  I+  +  A +   A  LF   
Sbjct: 573 TYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL 632

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
            ++     V +Y + I GL + G   EA +L+ +M+     P+ +TY +++ +   + + 
Sbjct: 633 PLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDA 692

Query: 549 KMVKRLLQDVIDARIELDYHT--------SIRLTKFIFKFHSSSSAVN 588
               +L++++      +D  T        S     +  K+H+ S + +
Sbjct: 693 TKSVKLIEELKRCGFSVDASTIKMVIDMLSDDKANYFSKYHNCSKSTS 740



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 92/375 (24%), Positives = 179/375 (47%), Gaps = 25/375 (6%)

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           L     + ++ D+   L ++M   G + N+ T + +I  F   +   +AFS +  +   G
Sbjct: 192 LFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLG 251

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS--- 377
           + P+ +  + LI+ L   G   +AL++ D ++E+   PD  T  +L++ +CLSG+ +   
Sbjct: 252 YEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAM 311

Query: 378 -LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
            L+ K+V     + + V Y  +L+  CK+G    A++L   M ++    D   +  ++ G
Sbjct: 312 LLIDKMV-EYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 370

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
           LC    +D A N++  + M     N   +  ++     AGR     +L R  I  K   +
Sbjct: 371 LCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPN 430

Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
           VV+++V I   ++ G+  EA  L+ +M H  + P+  TY  ++  FCKE ++    ++  
Sbjct: 431 VVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM-- 488

Query: 557 DVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKL---GLLSDE 613
             +D  +      +IR    +   +  ++ ++        GL   E++RK+   G+++D 
Sbjct: 489 --VDLMVSKGCDPNIRTFNILINGYCKANRIDD-------GL---ELFRKMSLRGVVAD- 535

Query: 614 TMTPVSLFDGFVPCE 628
           T+T  +L  GF  CE
Sbjct: 536 TVTYNTLIQGF--CE 548


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 112/491 (22%), Positives = 221/491 (45%), Gaps = 13/491 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV ++  +I  + +    FE  + +  E+A  G  +    +   +R   +          
Sbjct: 55  DVVTYTSLIDGLGKEKRSFEAYK-LFKEMALRGLALDTVCYTALIRELLQTGKIPQASSV 113

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
           +  M   G  P+    + ++D L K GR+   +++ K  +     PN + ++  +  LCK
Sbjct: 114 YKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCK 173

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              +    +++  M +    P+   + +L++  CK G +  A      M+  G    V  
Sbjct: 174 ARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYT 233

Query: 258 WTVLIDGFRRLRRLDMAGY-LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
           + +LI GF +    D A + L ++   NGC+ ++ TYT+++    + K    A + ++ +
Sbjct: 234 YNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKI 293

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR- 375
            + G  P +  +N L++ L KMG  ++A+D+   +++    PD  T+ SL+  +    R 
Sbjct: 294 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRS 353

Query: 376 ---FSLLPKLVC-GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
              + L  ++   GL +  D V Y AL+    + G   QA  +Y TM   G  PD  +  
Sbjct: 354 FEAYKLFKEMALRGLAL--DTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLS 411

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            ++ GL  A +I  A+ +++ +     A N  V++A++  L +A +   A+++  +    
Sbjct: 412 TMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKA 471

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
               D ++Y + I GL + G  E A   + +M      P+ YTY +++  FCK  N    
Sbjct: 472 FCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAA 531

Query: 552 KRLLQDVIDAR 562
             +  D+  +R
Sbjct: 532 CGVFDDMSSSR 542



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 108/460 (23%), Positives = 203/460 (44%), Gaps = 8/460 (1%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           TG+      +   +   GCV    T    +    +    G  +  F  M   G  PN   
Sbjct: 104 TGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVV 163

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            + ++  L K  ++D  +++L + +     P+ +++N+ +  LCK  DV   +     M+
Sbjct: 164 YSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEML 223

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL-GTSLSVNAWTVLIDGFRRLRRL 271
             G  P+V  + IL++ FCK G    A   L    T+ G ++ ++ +T ++D   + +++
Sbjct: 224 EAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKI 283

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           + A  L EK+  NGC+P + TY +L+ G  +      A   L  +   G  PD+V +  L
Sbjct: 284 EEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSL 343

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF---SLLPKLVCGLEV 388
           ID L K     +A  ++  +    L  D+  + +L+  +  +G+    S + K +     
Sbjct: 344 IDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGC 403

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
             D+V  + ++    KAG    AV+++ +M  +G  P+   +  L+ GLC ARK+D A+ 
Sbjct: 404 VPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALE 463

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           +   +       +   +  ++D L ++G    A   F   +      DV +Y + I G  
Sbjct: 464 MLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFC 523

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
           + G T+ A  ++  M       N  TY  ++   CK R +
Sbjct: 524 KAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQL 563



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 190/412 (46%), Gaps = 19/412 (4%)

Query: 203 NVKDVIGMMVR---KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
            +++ + +M +    G  P +  +  LLN  CKMGR+ EA  LL  ++  G +  V  +T
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
            LIDG  + +R   A  L+++M   G + + V YT+LI+  ++      A S    + S 
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
           G  PD+V  + +ID LSK G    A+ ++  +    L P+   + +L+  +C +      
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA------ 174

Query: 380 PKLVCGLEVEA---------DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
            K+ C LE+ A         D + YN L+   CK+G    A   ++ ML+ G  PD Y++
Sbjct: 175 RKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTY 234

Query: 431 VGLLRGLCGARKIDEAI-NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
             L+ G C A   D A  ++ Q   +N   ++ H +TAIVD L +  +  +A+ L  +  
Sbjct: 235 NILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKIT 294

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
                  + +Y   + GL + GR EEA  L  ++      P+  TY  ++    KE+   
Sbjct: 295 ANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSF 354

Query: 550 MVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
              +L +++    + LD      L + + +      A +    M + G +PD
Sbjct: 355 EAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPD 406



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 195/424 (45%), Gaps = 13/424 (3%)

Query: 149 GFTPNTFARNIVMDVLFKIGR----VDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNV 204
           G TP     N +++ L K+GR    +DL  K++     P+ +++   +  L K       
Sbjct: 16  GCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEA 75

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
             +   M  +G   +   +  L+    + G+I +A  +   M + G    V   + +IDG
Sbjct: 76  YKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDG 135

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
             +  R+  A  +++ M   G +PN V Y++LI G  +A+    A   L  ++     PD
Sbjct: 136 LSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPD 195

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-----FSLL 379
            + +NVLID L K G  + A   +D +LE    PD YT+  L+S  C +G       SL 
Sbjct: 196 TITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLA 255

Query: 380 PK-LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
            +  + G  +  D+  Y A++ +  K     +AV L   +   G TP   ++  LL GLC
Sbjct: 256 QETTINGCTI--DIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLC 313

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
              +++EAI++ + IV N    +   +T+++D L +  R  +A +LF+   +    LD V
Sbjct: 314 KMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTV 373

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
            YT  IR LL+ G+  +A  +Y  M      P+  T   M+    K   I    R+ +  
Sbjct: 374 CYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKS- 432

Query: 559 IDAR 562
           ++AR
Sbjct: 433 MEAR 436



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 101/426 (23%), Positives = 191/426 (44%), Gaps = 33/426 (7%)

Query: 48  LAPH-IVHSTL---------LNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLT 97
           LAP+ +V+S L         ++C  +++A     +C        D  +++ +I  + + +
Sbjct: 157 LAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTP------DTITYNVLIDGLCK-S 209

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWR-GEMYGMVLEAFDEMGRFGFTPNTFA 156
           G  E  R    E+   GC     T+ + +  + + G           E    G T +   
Sbjct: 210 GDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHT 269

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
              ++D L K  +++  + ++++       P   ++N  L  LCK+  +    D++  +V
Sbjct: 270 YTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIV 329

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
             G  P+V  +  L++   K  R  EAY+L   M   G +L    +T LI    +  ++ 
Sbjct: 330 DNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIP 389

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A  +++ M  +GC P+VVT +++I G  +A     A      +E+ G AP+ V ++ LI
Sbjct: 390 QASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALI 449

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-------FSLLPKLVCG 385
             L K    D AL++   + +    PD+ T+  L+  +C SG        F  + +  C 
Sbjct: 450 HGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGC- 508

Query: 386 LEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
              + D+  YN L+S FCKAG  + A  +++ M     + +  ++  L+ GLC  R++ +
Sbjct: 509 ---KPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTK 565

Query: 446 AINVYQ 451
           A   +Q
Sbjct: 566 ASLYFQ 571



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/352 (23%), Positives = 150/352 (42%), Gaps = 15/352 (4%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV +++ +IS   +          +  E    GC I   T+   +    + +     +  
Sbjct: 230 DVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVAL 289

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGR----VDLGIKVLKETQLPNFLSFNIALCNLCK 197
            +++   G TP     N +++ L K+GR    +DL  K++     P+ +++   +  L K
Sbjct: 290 MEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGK 349

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
                    +   M  +G   +   +  L+    + G+I +A  +   M + G    V  
Sbjct: 350 EKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVT 409

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
            + +IDG  +  R+  A  +++ M   G +PN V Y++LI G  +A+    A   L  ++
Sbjct: 410 LSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMK 469

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
                PD + +N+LID L K G  + A   +D +LE    PD YT+  L+S  C +G   
Sbjct: 470 KAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGN-- 527

Query: 378 LLPKLVCGL-------EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
                 CG+          A++V Y AL+S  CK     +A   +  M ++G
Sbjct: 528 --TDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQHMKERG 577


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 125/555 (22%), Positives = 237/555 (42%), Gaps = 25/555 (4%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
           A+  F +  + R     V  F  ++ VV R+ GR + V  +  ++  +     A +F + 
Sbjct: 65  AIDLFGYMVRSRP-LPSVIDFCKLMGVVVRM-GRPDVVISLHKKMEMLRMPCNAYSFTIL 122

Query: 126 LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF 185
           ++ +         L  F ++ + GF P     N ++  L    R+   + +  +   PN 
Sbjct: 123 MKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCKPNV 182

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGL 245
           ++F   +  LC+   V     ++  M+  G  PN   +  +++  CKMG    A  LL  
Sbjct: 183 VTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRK 242

Query: 246 MITLGTSL-SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
           M  +   + +V  +  +IDG  +  R   A  L+ +M +    P++VTY  +I GF  + 
Sbjct: 243 MEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISG 302

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
            +S A   L  +      PD+V  + LI+   K G + +A ++YD +L   ++P + T+ 
Sbjct: 303 RWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYS 362

Query: 365 SLLSTVCLSGR-------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
           S++   C   R       F L P   C      D++ +N L++ +C+A   +  +KL + 
Sbjct: 363 SMIDGFCKQNRLDAAEHMFYLTPTKGCS----PDIITFNTLIAGYCRAKRVDDGIKLLHE 418

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           M + G   +  ++  L+ G C    ++ A ++ Q ++ +    N      ++D L + G+
Sbjct: 419 MTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGK 478

Query: 478 CHKAIQLFRRAIVEKYPL-----------DVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
              A+++F+     K  +           DV +Y + I GL+  G+  EA  LY +M H 
Sbjct: 479 LKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHR 538

Query: 527 AVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSA 586
            + P+  TY  M+   CK+  +    ++   +       D  T   L     K       
Sbjct: 539 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDG 598

Query: 587 VNQLVEMCNLGLIPD 601
           +    EM   G++ D
Sbjct: 599 LELFCEMGQRGIVAD 613



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/429 (23%), Positives = 195/429 (45%), Gaps = 26/429 (6%)

Query: 152 PNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDV 207
           PN    N ++D L+K GR     +L I++ ++   P+ +++N  +   C     S+ + +
Sbjct: 251 PNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQL 310

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
           +  M+ +   P+V  F  L+N F K G+  EA +L   M+      S   ++ +IDGF +
Sbjct: 311 LQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCK 370

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
             RLD A +++      GCSP+++T+ +LI G+  AK        L  +   G   + + 
Sbjct: 371 QNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTIT 430

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-------FSLLP 380
           +  LI    ++G  + A D+   ++   + P+  T  +LL  +C +G+       F  + 
Sbjct: 431 YTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQ 490

Query: 381 KLVCGLE-------VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
           K    ++       VE D+  YN L+      G   +A +LY  M  +G  PD  ++  +
Sbjct: 491 KSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 550

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF----RRAI 489
           + GLC   ++DEA  ++  +   + + +      ++    +AG     ++LF    +R I
Sbjct: 551 IDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGI 610

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
           V     D ++Y   I G  +    + A  ++ +M    V P+  T R ML     +  ++
Sbjct: 611 VA----DAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELE 666

Query: 550 MVKRLLQDV 558
               +L+D+
Sbjct: 667 RAVAMLEDL 675



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 109/457 (23%), Positives = 207/457 (45%), Gaps = 24/457 (5%)

Query: 136 GMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ-----LPNFLS 187
           G V+EA    D M   G  PN      ++D + K+G     + +L++ +     +PN + 
Sbjct: 196 GRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVI 255

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           +N  +  L K    S+  ++   M  K  +P++  +  ++N FC  GR ++A QLL  M+
Sbjct: 256 YNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEML 315

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
               +  V  ++ LI+ F +  +   A  L+++M+     P+ VTY+S+I GF +     
Sbjct: 316 ERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLD 375

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A     +  ++G +PD++  N LI    +    DD + +   + E  LV ++ T+ +L+
Sbjct: 376 AAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLI 435

Query: 368 STVCLSGRFS----LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD--- 420
              C  G  +    LL +++    V  ++V  N LL   C  G    A++++  M     
Sbjct: 436 HGFCQVGDLNAAQDLLQEMISS-GVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 494

Query: 421 --------KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
                    G  PD  ++  L+ GL    K  EA  +Y+ +       +   +++++D L
Sbjct: 495 DIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 554

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
            +  R  +A Q+F     + +  DVV++   I G  + G  ++   L+ +M    +  +A
Sbjct: 555 CKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADA 614

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
            TY  ++  F K  NI     + Q++I + +  D  T
Sbjct: 615 ITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTIT 651



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/409 (21%), Positives = 182/409 (44%), Gaps = 8/409 (1%)

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
           ++  + +  D+ G MVR    P+V  F  L+    +MGR      L   M  L    +  
Sbjct: 58  EIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAY 117

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
           ++T+L+  F    +L  A   + K+ + G  P VVT+ +L+ G       S A      +
Sbjct: 118 SFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM 177

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR- 375
                 P++V    L++ L + G   +A+ + D +LE  L P+  T+ +++  +C  G  
Sbjct: 178 ----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDT 233

Query: 376 ---FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
               +LL K+     +  ++V+YN ++    K G  + A  L+  M +K   PD  ++  
Sbjct: 234 VSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNC 293

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           ++ G C + +  +A  + Q ++      +    +A+++  ++ G+  +A +L+   +   
Sbjct: 294 MINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRS 353

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVK 552
                V+Y+  I G  +  R + A  ++         P+  T+  ++  +C+ + +    
Sbjct: 354 IIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGI 413

Query: 553 RLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           +LL ++ +A +  +  T   L     +    ++A + L EM + G+ P+
Sbjct: 414 KLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPN 462



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/347 (23%), Positives = 143/347 (41%), Gaps = 21/347 (6%)

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           L  GF E K    A      +      P ++    L+  + +MG  D  + ++  +  L+
Sbjct: 52  LQSGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLR 111

Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAV 412
           +  ++Y+F  L+   C   +          +  L     +V +N LL   C     ++A+
Sbjct: 112 MPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEAL 171

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
            L++ M      P+  +F  L+ GLC   ++ EA+ +   ++ +    N   +  IVD +
Sbjct: 172 DLFHQMC----KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 227

Query: 473 IEAGRCHKAIQLFRR-AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
            + G    A+ L R+   V     +VV Y   I GL + GR  +A+ L+ +M+   + P+
Sbjct: 228 CKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPD 287

Query: 532 AYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLV 591
             TY  M+  FC        ++LLQ++++ +I  D  T   L     K      A     
Sbjct: 288 IVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYD 347

Query: 592 EMCNLGLIPDEMWRKLGLLSDETMTPVSLFDGFVPCERRAGNANHLL 638
           EM    +IP             T+T  S+ DGF   + R   A H+ 
Sbjct: 348 EMLPRSIIP------------STVTYSSMIDGFCK-QNRLDAAEHMF 381



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 128/286 (44%), Gaps = 2/286 (0%)

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           L  GF  ++ LD A  L+  MV++   P+V+ +  L+   +      +  S    +E   
Sbjct: 52  LQSGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLR 111

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
              +     +L+ C         AL  +  + +L   P   TF +LL  +C+  R S   
Sbjct: 112 MPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEAL 171

Query: 381 KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
            L   +  + ++V +  L++  C+ G   +AV L + ML+ G  P+  ++  ++ G+C  
Sbjct: 172 DLFHQM-CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKM 230

Query: 441 RKIDEAINVYQGI-VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
                A+N+ + +  +++   N  ++  I+D L + GR   A  LF     ++   D+V+
Sbjct: 231 GDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVT 290

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
           Y   I G    GR  +A  L  +M    + P+  T+  ++ +F KE
Sbjct: 291 YNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKE 336



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/173 (22%), Positives = 81/173 (46%), Gaps = 4/173 (2%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNV 204
           G  P+    NI++  L   G+     ++ +E      +P+ ++++  +  LCK + +   
Sbjct: 504 GVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
             +   M  K F P+V  F  L+  +CK G + +  +L   M   G       +  LI G
Sbjct: 564 TQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYG 623

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           FR++  +D A  ++++M+ +G  P+ +T  +++ G    +    A + L+ L+
Sbjct: 624 FRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDLQ 676


>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g16710, mitochondrial; Flags: Precursor
 gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 507

 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 105/414 (25%), Positives = 201/414 (48%), Gaps = 7/414 (1%)

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCN 194
           L+ F  M      P+      ++ V+ K+ R D+ I + ++ Q+    P   + NI +  
Sbjct: 68  LDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHC 127

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           +C  +        +G M++ GF P++  F  LLN +C   RI +A  L   ++ +G   +
Sbjct: 128 VCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPN 187

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           V  +T LI    + R L+ A  L+ +M  NG  PNVVTY +L+ G  E   +  A   L 
Sbjct: 188 VVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLR 247

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            +      P+++    LID   K+G   +A ++Y+ ++++ + PD +T+ SL++ +C+ G
Sbjct: 248 DMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYG 307

Query: 375 RFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
                 ++   +E      + V+Y  L+  FCK+      +K++  M  KG   +  ++ 
Sbjct: 308 LLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYT 367

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            L++G C   + D A  V+  +       +   +  ++D L   G+  KA+ +F      
Sbjct: 368 VLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKR 427

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
           +  +++V+YT+ I+G+ + G+ E+A+ L+  +    + PN  TY  M+  FC+ 
Sbjct: 428 EMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRR 481



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 106/472 (22%), Positives = 210/472 (44%), Gaps = 49/472 (10%)

Query: 170 VDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
           +DL  +++    LP+ + F   L  + K+N    V  +   M   G  P +    I+++C
Sbjct: 68  LDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHC 127

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
            C   +   A   LG M+ LG    +  +T L++G+    R++ A  L+++++  G  PN
Sbjct: 128 VCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPN 187

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
           VVTYT+LI+   + +  + A    + + + G  P++V +N L+  L ++G + DA  +  
Sbjct: 188 VVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLR 247

Query: 350 GLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPN 409
            +++ ++ P+  TF                                 AL+  F K G   
Sbjct: 248 DMMKRRIEPNVITF--------------------------------TALIDAFVKVGKLM 275

Query: 410 QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
           +A +LYN M+     PD +++  L+ GLC    +DEA  ++  +  N    N  ++T ++
Sbjct: 276 EAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLI 335

Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
               ++ R    +++F     +    + ++YTV I+G    GR + A  +++QM     P
Sbjct: 336 HGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAP 395

Query: 530 PNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQ 589
           P+  TY V+L   C    ++    + + +    ++++  T   + + + K      A + 
Sbjct: 396 PDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDL 455

Query: 590 LVEMCNLGLIPDEM--------WRKLGLLSDETMTPVSLF-----DGFVPCE 628
              + + G+ P+ +        + + GL+ +      SLF     DGF+P E
Sbjct: 456 FCSLFSKGMKPNVITYTTMISGFCRRGLIHEAD----SLFKKMKEDGFLPNE 503



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 85/352 (24%), Positives = 166/352 (47%), Gaps = 7/352 (1%)

Query: 107 VGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK 166
           +G++ ++G      TF   L  Y         +  FD++   GF PN      ++  L K
Sbjct: 141 LGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCK 200

Query: 167 IGRVDLGIKVLKET----QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
              ++  +++  +       PN +++N  +  LC++    +   ++  M+++   PNV  
Sbjct: 201 NRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVIT 260

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           F  L++ F K+G++ EA +L  +MI +     V  +  LI+G      LD A  ++  M 
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLME 320

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
           +NGC PN V YT+LI GF ++K           +  +G   + + + VLI     +G  D
Sbjct: 321 RNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPD 380

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALL 399
            A +V++ +   +  PD  T+  LL  +C +G+     ++ + +   E++ ++V Y  ++
Sbjct: 381 VAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIII 440

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
              CK G    A  L+ ++  KG  P+  ++  ++ G C    I EA ++++
Sbjct: 441 QGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFK 492



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 82/335 (24%), Positives = 158/335 (47%), Gaps = 7/335 (2%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           R E    +  ++  +G      T+   +R   +       +E F++MG  G  PN    N
Sbjct: 168 RIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYN 227

Query: 159 IVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
            ++  L +IGR      +L++       PN ++F   +    K+  +   K++  +M++ 
Sbjct: 228 ALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQM 287

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
             YP+V  +  L+N  C  G + EA Q+  LM   G   +   +T LI GF + +R++  
Sbjct: 288 SVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDG 347

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             ++ +M Q G   N +TYT LI+G+       +A    + + S    PD+  +NVL+D 
Sbjct: 348 MKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDG 407

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEAD 391
           L   G  + AL +++ + + ++  +  T+  ++  +C  G+      L C L    ++ +
Sbjct: 408 LCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPN 467

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
           ++ Y  ++S FC+ G  ++A  L+  M + GF P+
Sbjct: 468 VITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 129/524 (24%), Positives = 240/524 (45%), Gaps = 14/524 (2%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTF-LLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           G  E    I  E+   G  +   T+  +   I   GEM    +  F+EM   G  P+T+ 
Sbjct: 360 GNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEM-AKAMSLFNEMLMAGLEPDTWT 418

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N+++D   K   +    ++L E +     P+  ++++ +  LC  +D+    +V+  M+
Sbjct: 419 YNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMI 478

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
           R G  PNV M+  L+  + +  R   A +LL +MI  G    +  +  LI G  R ++++
Sbjct: 479 RNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVE 538

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A  L   M + G  PN  TY + I  + ++    +A  +   + S G  P+ V + +LI
Sbjct: 539 EAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILI 598

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS-----LLPKLVCGLE 387
                +G+  +AL  +  +LE  L+PD   + +++ ++  +G+        L  L  G  
Sbjct: 599 KGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTG-- 656

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
           V  D+ +YN+L+S FCK G   +A +LY+ ML  G  P+   +  L+ GLC   ++ +A 
Sbjct: 657 VVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKAR 716

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            ++  I   +   +   ++ I+D   ++G   +A +LF   I +    D   Y + I G 
Sbjct: 717 ELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGC 776

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
            + G  E+A  L+ + +  +V  +   +  ++ SFCK   +   + L  D++D ++  + 
Sbjct: 777 GKEGNLEKALSLFHEAQQKSVG-SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNI 835

Query: 568 HTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLS 611
            T   L     K      A    ++M    +IP+ +     LLS
Sbjct: 836 VTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLS 879



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/463 (23%), Positives = 204/463 (44%), Gaps = 6/463 (1%)

Query: 144  EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLN 199
            +MG  G  PN       +++  K G + +  +  K+      +PN + + I +   C + 
Sbjct: 546  DMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVG 605

Query: 200  DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
            +          M+ KG  P++R +  +++   K G+  EA  +    +  G    V  + 
Sbjct: 606  NTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYN 665

Query: 260  VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
             LI GF +   ++ A  L+++M+ NG +PN+V Y +LI G  +    + A    D +E +
Sbjct: 666  SLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEK 725

Query: 320  GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
               PD+V ++ +ID   K G+  +A  ++D ++   + PD Y +C L+      G     
Sbjct: 726  DLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKA 785

Query: 380  PKLVCGLEVEA--DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
              L    + ++   L  +N+L+  FCK G   +A +L++ M+DK  TP+  ++  L+   
Sbjct: 786  LSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAY 845

Query: 438  CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
              A  ++EA  ++  +   N   N   +T+++    + G   K I LF+         D 
Sbjct: 846  GKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDA 905

Query: 498  VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
            ++Y V      + G++ EA  L ++     +      +  ++   CKE+ I  V  LL +
Sbjct: 906  IAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSE 965

Query: 558  VIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
            +    + L   T   L    +K  +   A   L  M  LG +P
Sbjct: 966  MGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVP 1008



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 123/523 (23%), Positives = 227/523 (43%), Gaps = 51/523 (9%)

Query: 125 FLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-- 182
            +R   +  M G+  + +  M      P+ +    V+    K+G V  G  VL E +   
Sbjct: 213 LMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKEC 272

Query: 183 -PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
            PN  ++N  +  LC+   V    +V  +M+ KG  P+   + +L++ FCK  R  EA  
Sbjct: 273 KPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKL 332

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           +   M + G + +   +T LIDGF +   ++ A  + ++M+  G   NVVTY ++I G  
Sbjct: 333 IFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIA 392

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           +A   + A S  + +   G  PD   +N+LID   K      A ++   +   KL P  +
Sbjct: 393 KAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPF 452

Query: 362 TFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           T+  L+S +C S       +++  +    V+ ++ +Y  L+  + +      A++L   M
Sbjct: 453 TYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIM 512

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEA----------------------INVY------ 450
           +  G  PD + +  L+ GLC A+K++EA                      IN+Y      
Sbjct: 513 IANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEI 572

Query: 451 ------------QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
                        GIV NN      ++T ++    + G   +A+  F+  + +    D+ 
Sbjct: 573 QVAERYFKDMLSSGIVPNNV-----IYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIR 627

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           +Y+  I  L + G+T+EA  ++ +     V P+ + Y  ++  FCKE +I+   +L  ++
Sbjct: 628 AYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEM 687

Query: 559 IDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           +   I  +      L   + K    + A     E+    L+PD
Sbjct: 688 LHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPD 730



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 112/457 (24%), Positives = 201/457 (43%), Gaps = 37/457 (8%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCKLNDVSNV 204
           GF P     N +M  L K   + L  KV    ++   +P+  ++   +   CK+ DV   
Sbjct: 202 GFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKG 261

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
           K V+  M  K   PN+  +   +   C+ G + EA ++  LM+  G     + +T+L+DG
Sbjct: 262 KMVLSEM-EKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDG 320

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
           F + +R   A  ++E M  +G +PN  TYT+LI GF++      A    D + + G   +
Sbjct: 321 FCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLN 380

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVC 384
           +V +N +I  ++K G    A+ +++ +L   L PD++T                      
Sbjct: 381 VVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWT---------------------- 418

Query: 385 GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
                     YN L+  + K+    +A +L   M  +  TP  +++  L+ GLC +  + 
Sbjct: 419 ----------YNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQ 468

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
           +A  V   ++ N    N  ++  ++   ++  R   AI+L +  I      D+  Y   I
Sbjct: 469 KANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLI 528

Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
            GL    + EEA +L   M    + PNA+TY   +  + K   I++ +R  +D++ + I 
Sbjct: 529 IGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIV 588

Query: 565 LDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            +      L K      ++  A++    M   GLIPD
Sbjct: 589 PNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPD 625



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/371 (21%), Positives = 168/371 (45%), Gaps = 58/371 (15%)

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
           I LCN   ++   N+ + + +  RK   P + + + L+ C+ + G               
Sbjct: 128 IRLCNSGLIHQADNMLEKL-LQTRK---PPLEILDSLVRCYREFG--------------- 168

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           G++L+V  + + ID FR L  L+ A  ++   +  G  P ++   +L++  ++A M  + 
Sbjct: 169 GSNLTV--FDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLF 226

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
           +                                    VY  ++E K+VPD YT+ +++  
Sbjct: 227 WK-----------------------------------VYGSMVEAKIVPDVYTYTNVIKA 251

Query: 370 VCLSGRFSLLPKLVCGLEVE--ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
            C  G       ++  +E E   +L  YNA +   C+ G  ++A+++   M++KG  PD 
Sbjct: 252 HCKVGDVIKGKMVLSEMEKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDG 311

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
           +++  L+ G C  ++  EA  +++ +  +    N   +TA++D  I+ G   +A+++   
Sbjct: 312 HTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDE 371

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN 547
            I     L+VV+Y   I G+ + G   +A  L+++M    + P+ +TY +++  + K  +
Sbjct: 372 MITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHD 431

Query: 548 IKMVKRLLQDV 558
           +     LL ++
Sbjct: 432 MAKACELLAEM 442



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 50/247 (20%), Positives = 102/247 (41%), Gaps = 36/247 (14%)

Query: 390 ADLVVYNALLSYFCKAGFPNQAV-----------------------------------KL 414
           ++L V++  +  F   GF N+A                                    K+
Sbjct: 170 SNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKV 229

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
           Y +M++    PD Y++  +++  C    + +   V   +       N   + A +  L +
Sbjct: 230 YGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQ 288

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
            G   +A+++ +  + +    D  +YT+ + G  +  R++EA +++  M    + PN +T
Sbjct: 289 TGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFT 348

Query: 535 YRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMC 594
           Y  ++  F KE NI+   R+  ++I   ++L+  T   +   I K    + A++   EM 
Sbjct: 349 YTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEML 408

Query: 595 NLGLIPD 601
             GL PD
Sbjct: 409 MAGLEPD 415


>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
 gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
          Length = 439

 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 119/443 (26%), Positives = 210/443 (47%), Gaps = 24/443 (5%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDV 207
           PN F  ++++  L K GR+   +    ++L+   +PN    N+ L +LC+   +      
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQ---- 56

Query: 208 IGMMVRKGFY--PNVRMFEILLNCFCKMGRIAEAYQLLGLM-ITLGTSLSVNAWTVLIDG 264
             M + +G    P+V    IL+N FC++  + +A +L   M            +T +I  
Sbjct: 57  -AMAIFRGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKC 115

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL-DMLESEGHAP 323
           + ++ RLD A  L E+   + CS +V+  TS+ +GF +A+    A+  L DM+E +   P
Sbjct: 116 YCKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKP 173

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV 383
           D+V  NV+I    K G   +A ++ + L+ +  VP++ T+ +L+   C SG  S   +L 
Sbjct: 174 DIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLF 233

Query: 384 CGLE-----VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
             L       E ++V +NAL+S  CKA     A +L   M  +    D +++  L+ GLC
Sbjct: 234 KVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLC 293

Query: 439 GARKIDEAINVYQGIVMN--NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
              +  E   V++ ++    NP+V    +T +V    +AG    A Q+ R  + +  P D
Sbjct: 294 KQGRTSEVSRVFEEMLREGCNPSVV--TYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPD 351

Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
           V +YTV + GL E G+   A   + ++     PP A  Y  ++   CK   +    +   
Sbjct: 352 VTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYV 411

Query: 557 DVIDARIELDYHTSIRLTKFIFK 579
           +++D R+  D  T   L + + K
Sbjct: 412 EMLDRRLAPDPATCKLLVEMLCK 434



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 110/465 (23%), Positives = 193/465 (41%), Gaps = 76/465 (16%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET 180
           TF + +    +    G  +E +++M      PN    N+++  L + G++D  + + +  
Sbjct: 5   TFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAIFRGI 64

Query: 181 QL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK-GFYPNVRMFEILLNCFCKMGR--- 235
           Q  P+ ++ NI +   C+L  +    ++   M +     P    +  ++ C+CKM R   
Sbjct: 65  QCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQ 124

Query: 236 ------------------------------IAEAYQLLGLMITLGTSL-SVNAWTVLIDG 264
                                         + EAYQLL  M+   ++   + AW V+I G
Sbjct: 125 ARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHG 184

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH--A 322
           F +  R+  A  + E +V  GC PN VTYT+LI GF ++   S A     +L S  H   
Sbjct: 185 FCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAE 244

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL 382
           P++V  N LI  L K    + A ++   +    L  D++T+ +L+  +C  GR S + ++
Sbjct: 245 PNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRV 304

Query: 383 VCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
              +  E     +V Y  L+   CKAG    A ++  +M+ KG  PD  ++  LL G   
Sbjct: 305 FEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEG--- 361

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
                                           L E G+   A + F + + E+ P   V 
Sbjct: 362 --------------------------------LFENGKVRTATEFFEKILRERCPPCAVV 389

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
           Y+  +RG  +    +EA   Y +M    + P+  T ++++   CK
Sbjct: 390 YSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCK 434



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 110/249 (44%), Gaps = 9/249 (3%)

Query: 136 GMVLEAFDEMGRF---GFTPNTFARNIVMDVLFKIGRVDLGIKVLK------ETQLPNFL 186
           G V EA++ +      G  PN      ++D   K G +   +++ K          PN +
Sbjct: 189 GRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVV 248

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           +FN  +  LCK + + +  +++  M  +    +   +  L++  CK GR +E  ++   M
Sbjct: 249 TFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEM 308

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
           +  G + SV  +T L+    +   L  A  +   MV  G  P+V TYT L++G  E    
Sbjct: 309 LREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKV 368

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
             A  F + +  E   P  V ++ L+    K    D+A+  Y  +L+ +L PD  T   L
Sbjct: 369 RTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLL 428

Query: 367 LSTVCLSGR 375
           +  +C  GR
Sbjct: 429 VEMLCKRGR 437



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 113/251 (45%), Gaps = 6/251 (2%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGF--TPNTF 155
           GR      ++  L  +GCV  A T+   +  + +       L+ F  +        PN  
Sbjct: 189 GRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVV 248

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKETQLPNF----LSFNIALCNLCKLNDVSNVKDVIGMM 211
             N ++  L K  R++   +++K+ +  +      ++   +  LCK    S V  V   M
Sbjct: 249 TFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEM 308

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
           +R+G  P+V  +  L++  CK G + +A Q++  M+  G    V  +TVL++G     ++
Sbjct: 309 LREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKV 368

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
             A   +EK+++  C P  V Y++L++G  +A +   A  +   +     APD     +L
Sbjct: 369 RTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLL 428

Query: 332 IDCLSKMGSYD 342
           ++ L K G  D
Sbjct: 429 VEMLCKRGRTD 439



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 73/321 (22%), Positives = 127/321 (39%), Gaps = 14/321 (4%)

Query: 288 PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
           PN  T++ LI G  +A     A    + +      P+L   N+L+  L + G  D A+ +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60

Query: 348 YDGLLELKLVPDSYTFCSLLSTVC----LSGRFSLLPKLVCGLEVEADLVVYNALLSYFC 403
           + G+   +  P   T   L++  C    L     L  ++     +  +   Y A++  +C
Sbjct: 61  FRGI---QCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117

Query: 404 KAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAH 463
           K    +QA +L         + D  +   + RG C A+++DEA  +   +V    A    
Sbjct: 118 KMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDI 175

Query: 464 VH-TAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY-- 520
           V    I+    +AGR  +A ++    +      + V+YT  I G  + G   EA  L+  
Sbjct: 176 VAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKV 235

Query: 521 -SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK 579
            S   H A  PN  T+  ++   CK   ++    L++ +    +  D  T   L   + K
Sbjct: 236 LSSRDHHA-EPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCK 294

Query: 580 FHSSSSAVNQLVEMCNLGLIP 600
              +S       EM   G  P
Sbjct: 295 QGRTSEVSRVFEEMLREGCNP 315


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 101/378 (26%), Positives = 191/378 (50%), Gaps = 3/378 (0%)

Query: 170 VDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
           +DL   +++   LP+   F+  L  + K+     V  +   M   G   N+    ILLNC
Sbjct: 66  LDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNC 125

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
           FC+  +++ A   LG MI LG   S+  +  L++GF R  R+  A Y++++MV  G  PN
Sbjct: 126 FCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPN 185

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
           VV Y ++I G  ++K    A   L+ +E +G  PD+V +N LI  L   G + DA  +  
Sbjct: 186 VVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVS 245

Query: 350 GLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAG 406
            + + ++ PD +TF +L+      GR S   +    +    ++ D+V Y+ L+   C   
Sbjct: 246 CMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYS 305

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
             ++A +++  M+ KG  PD  ++  L+ G C ++K++  + ++  +       N   +T
Sbjct: 306 RLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYT 365

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
            ++     AG+ + A ++FRR +      ++++Y V + GL + G+ E+A ++ + M+  
Sbjct: 366 ILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKN 425

Query: 527 AVPPNAYTYRVMLLSFCK 544
            +  +  TY +++   CK
Sbjct: 426 GMDADIVTYNIIIRGMCK 443



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/399 (25%), Positives = 196/399 (49%), Gaps = 11/399 (2%)

Query: 155 FARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGM 210
           F+R  ++  + K+ + D+ I + ++ Q+     N  + NI L   C+ + +S     +G 
Sbjct: 84  FSR--LLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGK 141

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M++ G  P++  F  LLN FC+  R+ +A  +   M+ +G   +V  +  +IDG  + ++
Sbjct: 142 MIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQ 201

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           +D A  L  +M ++G  P+VVTY SLI G   +  +S A   +  +      PD+   N 
Sbjct: 202 VDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNA 261

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA 390
           LID   K G   +A + Y+ ++   L PD  T+  L+  +C+  R     ++  G  V  
Sbjct: 262 LIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMF-GFMVSK 320

Query: 391 ----DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
               D+V Y+ L++ +CK+      +KL+  M  +G   +  ++  L++G C A K++ A
Sbjct: 321 GCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVA 380

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
             +++ +V      N   +  ++  L + G+  KA+ +           D+V+Y + IRG
Sbjct: 381 EEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRG 440

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
           + + G   +A+ +Y  +    + P+ +TY  M+L   K+
Sbjct: 441 MCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKK 479



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 104/402 (25%), Positives = 192/402 (47%), Gaps = 4/402 (0%)

Query: 206 DVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF 265
           D+   MV+    P++  F  LL+   KM +      L   M  LG   ++    +L++ F
Sbjct: 67  DLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCF 126

Query: 266 RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL 325
            R  +L +A     KM++ G  P++VT+ SL+ GF        A    D +   G+ P++
Sbjct: 127 CRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNV 186

Query: 326 VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCG 385
           V +N +ID L K    D+ALD+ + + +  + PD  T+ SL+S +C SGR+S   ++V  
Sbjct: 187 VIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSC 246

Query: 386 L---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
           +   E+  D+  +NAL+    K G  ++A + Y  M+ +   PD  ++  L+ GLC   +
Sbjct: 247 MTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSR 306

Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTV 502
           +DEA  ++  +V      +   ++ +++   ++ +    ++LF          + V+YT+
Sbjct: 307 LDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTI 366

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
            I+G    G+   A  ++ +M    V PN  TY V+L   C    I+    +L D+    
Sbjct: 367 LIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNG 426

Query: 563 IELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMW 604
           ++ D  T   + + + K    + A +    +   GL+PD +W
Sbjct: 427 MDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPD-IW 467



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/433 (22%), Positives = 194/433 (44%), Gaps = 34/433 (7%)

Query: 79  YFHDVQ--------SFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYW 130
           +FH VQ         F  ++S ++++  +++ V  +  ++  +G      T  + L  + 
Sbjct: 69  FFHMVQCRPLPSIADFSRLLSAISKMK-KYDVVIYLWEQMQMLGIPHNLCTCNILLNCFC 127

Query: 131 RGEMYGMVLEAFDEMGRFGFTP---------NTFAR-NIVMDVLFKIGR-VDLGIKVLKE 179
           R     + L    +M + G  P         N F R + V D L+   + V +G K    
Sbjct: 128 RCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYK---- 183

Query: 180 TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEA 239
              PN + +N  +  LCK   V N  D++  M + G  P+V  +  L++  C  GR ++A
Sbjct: 184 ---PNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240

Query: 240 YQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG 299
            +++  M        V  +  LID   +  R+  A   +E+M++    P++VTY+ LI G
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
                    A      + S+G  PD+V +++LI+   K    +  + ++  + +  +V +
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360

Query: 360 SYTFCSLLSTVCLSGRFSLLPKLV-----CGLEVEADLVVYNALLSYFCKAGFPNQAVKL 414
           + T+  L+   C +G+ ++  ++      CG  V  +++ YN LL   C  G   +A+ +
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMVFCG--VHPNIITYNVLLHGLCDNGKIEKALVI 418

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
              M   G   D  ++  ++RG+C A ++ +A ++Y  +       +   +T ++  L +
Sbjct: 419 LADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYK 478

Query: 475 AGRCHKAIQLFRR 487
            G   +A  LFR+
Sbjct: 479 KGLRREADALFRK 491



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 86/362 (23%), Positives = 160/362 (44%), Gaps = 42/362 (11%)

Query: 107 VGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK 166
           +G++ ++G      TF   L  + RG+     L  FD+M   G+ PN    N ++D L K
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198

Query: 167 IGRVDLGIKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
             +VD  + +L    K+   P+ +++N  +  LC     S+   ++  M ++  YP+V  
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258

Query: 223 FEILLNCFCKMGRIAEA------------------YQLL-----------------GLMI 247
           F  L++   K GR++EA                  Y LL                 G M+
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
           + G    V  +++LI+G+ + ++++    L+ +M Q G   N VTYT LI+G+  A   +
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
           +A      +   G  P+++ +NVL+  L   G  + AL +   + +  +  D  T+  ++
Sbjct: 379 VAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIII 438

Query: 368 STVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
             +C +G  +    + C L  +    D+  Y  ++    K G   +A  L+  M + G  
Sbjct: 439 RGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGIL 498

Query: 425 PD 426
           P+
Sbjct: 499 PN 500



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/287 (22%), Positives = 133/287 (46%), Gaps = 5/287 (1%)

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
           R  +LD +  L+  MVQ    P++  ++ L+    + K + +     + ++  G   +L 
Sbjct: 58  RFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLC 117

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKL 382
             N+L++C  +      AL     +++L   P   TF SLL+  C   R      +  ++
Sbjct: 118 TCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQM 177

Query: 383 VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
           V G+  + ++V+YN ++   CK+   + A+ L N M   G  PD  ++  L+ GLC + +
Sbjct: 178 V-GMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGR 236

Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTV 502
             +A  +   +       +     A++D  ++ GR  +A + +   I      D+V+Y++
Sbjct: 237 WSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSL 296

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
            I GL    R +EA  ++  M      P+  TY +++  +CK + ++
Sbjct: 297 LIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVE 343



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/263 (22%), Positives = 117/263 (44%), Gaps = 3/263 (1%)

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL---LPKLVCGLEVEADLVVYNAL 398
           DD+LD++  +++ + +P    F  LLS +    ++ +   L + +  L +  +L   N L
Sbjct: 63  DDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNIL 122

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           L+ FC+    + A+     M+  G  P   +F  LL G C   ++ +A+ ++  +V    
Sbjct: 123 LNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGY 182

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
             N  ++  I+D L ++ +   A+ L  R   +    DVV+Y   I GL   GR  +A  
Sbjct: 183 KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATR 242

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
           + S M    + P+ +T+  ++ +  KE  +   +   +++I   ++ D  T   L   + 
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLC 302

Query: 579 KFHSSSSAVNQLVEMCNLGLIPD 601
            +     A      M + G  PD
Sbjct: 303 MYSRLDEAEEMFGFMVSKGCFPD 325


>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 840

 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 104/422 (24%), Positives = 210/422 (49%), Gaps = 7/422 (1%)

Query: 150 FTPNTFARNIVMDVLFKIGRVDLGIK----VLKETQLPNFLSFNIALCNLCKLNDVSNVK 205
           F P+  + N +M    K+G VD+       +LK   LP+  S+NI +  LC    +    
Sbjct: 277 FQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEAL 336

Query: 206 DVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF 265
           D+   M   G  P++  + IL   F  +G I  A+ ++  M+  G + ++  +TVLI G 
Sbjct: 337 DLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGH 396

Query: 266 RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL 325
            ++  ++ A  L+++M+ +G   ++++ T L+    +++   +AF     +E+ G  PDL
Sbjct: 397 CQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDL 456

Query: 326 VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKL 382
           + ++ LI  L K G    A+ +Y+ +   +++P+S    ++L  +C  G+ S   +    
Sbjct: 457 ITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDY 516

Query: 383 VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
           +    +  D+++YN ++  + K G   +AVKLY  + +KG +P   +F  L+ G C  RK
Sbjct: 517 LITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRK 576

Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTV 502
           + +A  +   I ++    NA  +T +++   E G     ++L      +      ++YTV
Sbjct: 577 LSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTV 636

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
            I+GL +  + +E+  L   M  + + P+  +Y  ++ +FCK R+++   +L   ++   
Sbjct: 637 VIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHN 696

Query: 563 IE 564
           +E
Sbjct: 697 LE 698



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 110/471 (23%), Positives = 212/471 (45%), Gaps = 42/471 (8%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNL 195
           + ++E+   G   + +  +IV+D L +  R    +   ++T+     P+ +SFN  +   
Sbjct: 232 DVYNEIKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRY 291

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
           CKL  V   K    MM++ G  P+   + IL++  C  G + EA                
Sbjct: 292 CKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEA---------------- 335

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
                          LD+       M  +G  P++VTY  L KGF    + + A++ +  
Sbjct: 336 ---------------LDLKN----DMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQK 376

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
           +  +G  P+LV + VLI    ++G+ ++AL +Y  ++         +   LL ++C S +
Sbjct: 377 MLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQ 436

Query: 376 FSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
             +  KL C +E      DL+ Y+ L+   CK G   QA+ LY  M      P++     
Sbjct: 437 VDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGA 496

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           +L GLC   KI +A   +  ++ +N +++  ++  ++D  I+ G   +A++L+++   + 
Sbjct: 497 ILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKG 556

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVK 552
               +V++   + G     +  +A  L   +K   + PNA TY  ++  +C+E N++ + 
Sbjct: 557 ISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLL 616

Query: 553 RLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
            LL ++    I   + T   + K + K      +   L +M  +GL PD++
Sbjct: 617 ELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQV 667



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 116/574 (20%), Positives = 253/574 (44%), Gaps = 24/574 (4%)

Query: 69  FFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRI 128
            F    + +++   V SF+ ++S   +L G  +  +     + + G +  A ++ + +  
Sbjct: 267 LFFQDTEGKEFQPSVVSFNTIMSRYCKL-GFVDVAKSFFCMMLKHGLLPDAYSYNILIHG 325

Query: 129 YWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PN 184
                  G  L+  ++M   G  P+    NI+      +G ++    ++++  +    PN
Sbjct: 326 LCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPN 385

Query: 185 FLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLG 244
            +++ + +C  C++ +V     +   M+  GF  ++    +LL   CK  ++  A++L  
Sbjct: 386 LVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFC 445

Query: 245 LMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
            M   G    +  ++ LI G  +   +  A  L+EKM  N   PN + + +++ G  E  
Sbjct: 446 EMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKG 505

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
             S A  + D L +   + D++ +N++ID   K G+  +A+ +Y  L E  + P   TF 
Sbjct: 506 KISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFN 565

Query: 365 SLLSTVCLSGRFSLLPKLVCGLEV---EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
           SL+   C++ + S   +L+  +++   E + V Y  L++ +C+ G     ++L + M  K
Sbjct: 566 SLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAK 625

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
              P + ++  +++GLC   K+ E+  + + +       +   +  I+    +A    KA
Sbjct: 626 AIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKA 685

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
            QL+ + ++       V+Y + I G    G  ++A  L   +++  V  N Y Y  ++ +
Sbjct: 686 FQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKA 745

Query: 542 FCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            C + ++       + +++   E+    SIR           S+ + +L + C   L+ +
Sbjct: 746 HCAKGDVDKAVVYFRQMVEKGFEV----SIR---------DYSAVIGRLCKRC---LVTE 789

Query: 602 EMWRKLGLLSDETMTPVSLFDGFVPCERRAGNAN 635
             +    +LSD       LF+  +    + G+ N
Sbjct: 790 AKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLN 823



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/430 (22%), Positives = 197/430 (45%), Gaps = 7/430 (1%)

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCN 194
           L+ + EM   GF  +  +  +++  L K  +VD+  K+  E +     P+ ++++  +  
Sbjct: 406 LKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHG 465

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           LCK  +V     +   M      PN  +   +L   C+ G+I++A      +IT   SL 
Sbjct: 466 LCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLD 525

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           +  + ++IDG+ +      A  L++++ + G SP +VT+ SL+ GF   +  S A   LD
Sbjct: 526 IILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLD 585

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            ++  G  P+ V +  L++   + G+    L++   +    + P   T+  ++  +C   
Sbjct: 586 TIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQW 645

Query: 375 RFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
           +     +L+  ++   +  D V YN ++  FCKA    +A +LY+ ML     P + ++ 
Sbjct: 646 KLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYN 705

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            L+ G C    + +A N+   +      +N + +T I+      G   KA+  FR+ + +
Sbjct: 706 ILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEK 765

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
            + + +  Y+  I  L +     EA   +  M    V P+   + V+L +F +  ++   
Sbjct: 766 GFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSE 825

Query: 552 KRLLQDVIDA 561
             LL ++I +
Sbjct: 826 FELLAEMIKS 835



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 111/473 (23%), Positives = 196/473 (41%), Gaps = 65/473 (13%)

Query: 147 RFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNL----------- 195
            FGF  + F+R +V  VL +  R++    VL +  L        +LC L           
Sbjct: 119 EFGFQHSRFSRLVVSHVLARKKRLNELRLVLDQMLLHEGSGSAPSLCELLLGSFRSWDSS 178

Query: 196 --------CKLNDVSNVKDVIGMMVRK---GFYPNVRMFEILLNCFCKMGRIAEAYQLLG 244
                   C  +  + V D + ++V+     F  +++ +  LL        + + Y  + 
Sbjct: 179 NVVWDMLACAYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNLRHSNIMWDVYNEIK 238

Query: 245 LMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
           +    GT  S    ++++DG  R  R   A   ++        P+VV++ +++  + +  
Sbjct: 239 VS---GTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLG 295

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
              +A SF  M+   G  PD   +N+LI  L   GS  +ALD+ + +    L PD  T+ 
Sbjct: 296 FVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYN 355

Query: 365 SLLSTVCL----SGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
            L     L    +G ++++ K++       +LV Y  L+   C+ G   +A+KLY  M+ 
Sbjct: 356 ILAKGFRLLGLINGAWNIIQKMLIK-GPNPNLVTYTVLICGHCQIGNVEEALKLYKEMIS 414

Query: 421 KGFT-----------------------------------PDNYSFVGLLRGLCGARKIDE 445
            GF                                    PD  ++  L+ GLC   ++ +
Sbjct: 415 HGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQ 474

Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
           AI +Y+ +  N    N+ +H AI+  L E G+  +A   F   I     LD++ Y + I 
Sbjct: 475 AILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMID 534

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           G ++ G T EA  LY Q+    + P   T+  ++  FC  R +   +RLL  +
Sbjct: 535 GYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTI 587



 Score = 40.4 bits (93), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 4/102 (3%)

Query: 153 NTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF----LSFNIALCNLCKLNDVSNVKDVI 208
           N +A   ++      G VD  +   ++     F      ++  +  LCK   V+  K   
Sbjct: 735 NKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFF 794

Query: 209 GMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            MM+  G  P+  +FE+LLN F + G +   ++LL  MI  G
Sbjct: 795 CMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSG 836


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 116/489 (23%), Positives = 223/489 (45%), Gaps = 11/489 (2%)

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNI 190
           +  +L    +M  FG  PN +  +I+++    + RV        K+LK    P+  +F  
Sbjct: 77  HSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTT 136

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +  +     +     +   M+ +GF P+V  +  L+N  CK+G  + A +LLG M+   
Sbjct: 137 LIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKN 196

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
              +V A+  +ID   + R++  A  L+ +MV  G SP++ TY SLI        +    
Sbjct: 197 CQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVA 256

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
           + L+ +      PD+V  N ++D L K G   +A DV D +++  + P+  T+ +L+   
Sbjct: 257 TLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGH 316

Query: 371 CLSGRFS----LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
           CL         +   +VC      +++ YN L++ +CK    ++A+ L+  M  +   PD
Sbjct: 317 CLLSEMDEAVKVFDTMVCK-GCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPD 375

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
             ++  L+ GLC   ++ +AI ++  +V  +   N   +  ++D L +     +A+ L +
Sbjct: 376 TVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLK 435

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
                    D+    +AI G+   G  E A  L+S +    + P+ +TY +M+   C+  
Sbjct: 436 AIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRG 495

Query: 547 NIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRK 606
            +    +L +++ +    L+      +T+   + + +S A+  L EM   G   D     
Sbjct: 496 LLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMT 555

Query: 607 L--GLLSDE 613
           L   +LSD+
Sbjct: 556 LFVKMLSDD 564



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/433 (24%), Positives = 207/433 (47%), Gaps = 4/433 (0%)

Query: 175 KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
           ++L+    P+ + FN  L ++ K+   S +  +   M   G  PN+    IL+N FC + 
Sbjct: 51  RMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLN 110

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
           R+  A+ +L  ++ LG       +T LI G     ++  A +L++KM+  G  P+VVTY 
Sbjct: 111 RVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYG 170

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
           +LI G  +    S A   L  +  +   P++  +N +ID L K     +A +++  ++  
Sbjct: 171 TLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTK 230

Query: 355 KLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQA 411
            + PD +T+ SL+  +C    +  +  L+  +   ++  D+V +N ++   CK G   +A
Sbjct: 231 GISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEA 290

Query: 412 VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
             + + M+ +G  P+  ++  L+ G C   ++DEA+ V+  +V      N   +  +++ 
Sbjct: 291 HDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLING 350

Query: 472 LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
             +  R  KA+ LF     ++   D V+Y+  I GL    R ++A  L+ +M   +  PN
Sbjct: 351 YCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPN 410

Query: 532 AYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLV 591
             TYR++L   CK R +     LL+ +  + ++ D   +      + +     +A +   
Sbjct: 411 LVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFS 470

Query: 592 EMCNLGLIPDEMW 604
            + + GL PD +W
Sbjct: 471 NLSSKGLQPD-VW 482



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 109/451 (24%), Positives = 205/451 (45%), Gaps = 46/451 (10%)

Query: 105 GIVGELARVGCVIKAQTFLLFLR-IYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDV 163
            ++ ++ ++G      TF   +R IY  G++ G  L  FD+M   GF P+      +++ 
Sbjct: 117 SVLAKILKLGHQPDTATFTTLIRGIYVEGKI-GEALHLFDKMIGEGFRPDVVTYGTLING 175

Query: 164 LFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF--- 216
           L K+G     I++L    ++   PN  ++N  + +LCK   V+   ++   MV KG    
Sbjct: 176 LCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPD 235

Query: 217 --------------------------------YPNVRMFEILLNCFCKMGRIAEAYQLLG 244
                                            P+V  F  +++  CK G++ EA+ ++ 
Sbjct: 236 IFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVD 295

Query: 245 LMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
            MI  G   +V  +T L+DG   L  +D A  +++ MV  GC PNV++Y +LI G+ + +
Sbjct: 296 KMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQ 355

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
               A      +  +   PD V ++ LI  L  +    DA+ ++  ++    +P+  T+ 
Sbjct: 356 RIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYR 415

Query: 365 SLLSTVC----LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
            LL  +C    L+   +LL K + G  ++ D+ V N  +   C+AG    A  L++ +  
Sbjct: 416 ILLDYLCKNRYLAEAMALL-KAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSS 474

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
           KG  PD +++  ++ GLC    +DEA  +++ +  N   +N  ++  I    +      +
Sbjct: 475 KGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSR 534

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
           AIQL +  +   +  D  + T+ ++ L + G
Sbjct: 535 AIQLLQEMVARGFSADASTMTLFVKMLSDDG 565



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/413 (22%), Positives = 183/413 (44%), Gaps = 8/413 (1%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV ++  +I+ + ++      +R ++G + +  C      +   +    +          
Sbjct: 165 DVVTYGTLINGLCKVGNTSAAIR-LLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNL 223

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           F EM   G +P+ F  N ++  L  +        +L E      +P+ +SFN  +  LCK
Sbjct: 224 FSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCK 283

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              V+   DV+  M+++G  PNV  +  L++  C +  + EA ++   M+  G   +V +
Sbjct: 284 EGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVIS 343

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  LI+G+ +++R+D A YL+ +M +    P+ VTY++LI G    +    A +    + 
Sbjct: 344 YNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMV 403

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
           +    P+LV + +L+D L K     +A+ +   +    L PD       +  +C +G   
Sbjct: 404 ACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELE 463

Query: 378 LLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
               L   L    ++ D+  Y+ +++  C+ G  ++A KL+  M + G T +   +  + 
Sbjct: 464 AARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTIT 523

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
           RG     +   AI + Q +V    + +A   T  V  L + G      Q+ R 
Sbjct: 524 RGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILRE 576


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 119/505 (23%), Positives = 227/505 (44%), Gaps = 49/505 (9%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR      ++ ++   GC     T+ + L    +   +G  +E  DEM   G TPN    
Sbjct: 190 GRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTY 249

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N++++ + + GRVD   + L         P+ +S+   L  LC      +V+++   M+ 
Sbjct: 250 NVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMME 309

Query: 214 KGFYPN-------VRMF----------------------------EILLNCFCKMGRIAE 238
           K   PN       VR F                             I++N  CK GR+ +
Sbjct: 310 KNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDD 369

Query: 239 AYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIK 298
           A+Q L  M + G S    ++T ++ G  R  R + A  L ++MV+  C PN VT+ + I 
Sbjct: 370 AFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFIC 429

Query: 299 GFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP 358
              +  +   A   ++ +   G   ++V +N L++     G  D AL+++     +   P
Sbjct: 430 ILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF---YSMPCKP 486

Query: 359 DSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLY 415
           ++ T+ +LL+ +C + R     +L+  +   +   ++V +N L+S+FC+ G  ++A++L 
Sbjct: 487 NTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELV 546

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
             M++ G TP+  ++  LL G+      +EA+ +  G+V N  + +   +++I+  L   
Sbjct: 547 EQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSRE 606

Query: 476 GRCHKAIQLFRRAIVEKYPL--DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
            R  +AI++F   IV+   +    V Y   +  L +   T+ A   ++ M      PN  
Sbjct: 607 DRVEEAIKMFH--IVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNEL 664

Query: 534 TYRVMLLSFCKERNIKMVKRLLQDV 558
           TY  ++     E  +K  + LL+++
Sbjct: 665 TYITLIEGLANEDFLKETRDLLREL 689



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 105/411 (25%), Positives = 190/411 (46%), Gaps = 18/411 (4%)

Query: 77  RDYFHDVQSF---DHMISVVTRLTG-----RFETVRGIVGELARVGCVIKAQTFLLFLRI 128
           R++ + + S+      +S  T L G     R+E V  +  E+    C+    TF + +R 
Sbjct: 266 REFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRF 325

Query: 129 YWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PN 184
           + RG M    ++  ++M   G   NT   NIV++ + K GRVD   + L         P+
Sbjct: 326 FCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPD 385

Query: 185 FLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLG 244
            +S+   L  LC+     + K+++  MVRK   PN   F   +   C+ G I +A  L+ 
Sbjct: 386 TISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIE 445

Query: 245 LMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
            M   G  +++  +  L++GF    R+D A  L+  M    C PN +TYT+L+ G   A+
Sbjct: 446 QMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAE 502

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
               A   L  +  +  AP++V  NVL+    + G  D+A+++ + ++E    P+  T+ 
Sbjct: 503 RLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYN 562

Query: 365 SLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
           +LL  +          +L+ GL    V  D+V Y++++    +     +A+K+++ + D 
Sbjct: 563 TLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDL 622

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
           G  P    +  +L  LC     D AI+ +  +V N    N   +  +++ L
Sbjct: 623 GMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGL 673



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 106/466 (22%), Positives = 194/466 (41%), Gaps = 13/466 (2%)

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP----NFLSFNIALCNLCKL 198
           D     G  P+ +    ++  L + GR     +VL+  +      +  ++N  +   C+ 
Sbjct: 98  DRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRY 157

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
             +   + +I  M      P+   +  ++   C  GR+ EA  LL  M+  G   SV  +
Sbjct: 158 GQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTY 214

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
           TVL++   +      A  + ++M   GC+PN+VTY  +I G         A  FL+ L S
Sbjct: 215 TVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSS 274

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG---R 375
            G  PD V +  ++  L     ++D  +++  ++E   +P+  TF  L+   C  G   R
Sbjct: 275 YGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVER 334

Query: 376 FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
              + + + G    A+  + N +++  CK G  + A +  N M   G +PD  S+  +L+
Sbjct: 335 AIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLK 394

Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
           GLC A + ++A  + + +V  N   N       +  L + G   +A  L  +       +
Sbjct: 395 GLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEV 454

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
           ++V+Y   + G    GR + A  L+  M      PN  TY  +L   C    +     LL
Sbjct: 455 NIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAELL 511

Query: 556 QDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            +++      +  T   L  F  +      A+  + +M   G  P+
Sbjct: 512 AEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPN 557



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 120/572 (20%), Positives = 240/572 (41%), Gaps = 49/572 (8%)

Query: 74  AKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGE 133
           A  R    DV     +I  + R  GR      ++    R G  +    +   +  Y R  
Sbjct: 100 ATSRGEAPDVYLCTKLIRNLCR-RGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCR-- 156

Query: 134 MYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFN 189
            YG +  A   +      P+ +    ++  L   GRV   + +L +       P+ +++ 
Sbjct: 157 -YGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYT 215

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
           + L  +CK        +V+  M  KG  PN+  + +++N  C+ GR+ +A + L  + + 
Sbjct: 216 VLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSY 275

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           G      ++T ++ G    +R +    L+ +M++  C PN VT+  L++ F    M   A
Sbjct: 276 GFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERA 335

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
              L+ +   G A +    N++I+ + K G  DDA    + +      PD+ ++ ++L  
Sbjct: 336 IQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKG 395

Query: 370 VCLSGRFS----LLPKLV---------------CGL-------------------EVEAD 391
           +C + R+     LL ++V               C L                     E +
Sbjct: 396 LCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVN 455

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
           +V YNAL++ FC  G  + A++L+ +M  K   P+  ++  LL GLC A ++D A  +  
Sbjct: 456 IVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLA 512

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
            ++  + A N      +V    + G   +AI+L  + +      ++++Y   + G+ +  
Sbjct: 513 EMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDC 572

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSI 571
            +EEA  L   +    V P+  TY  ++    +E  ++   ++   V D  +        
Sbjct: 573 NSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYN 632

Query: 572 RLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           ++   + K  ++  A++    M + G +P+E+
Sbjct: 633 KILLALCKRCNTDGAIDFFAYMVSNGCMPNEL 664



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 108/250 (43%), Gaps = 4/250 (1%)

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A   +D   S G APD+     LI  L + G   DA  V           D + + +L++
Sbjct: 93  AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152

Query: 369 TVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
             C  G+     +L+  + V  D   Y  ++   C  G   +A+ L + ML +G  P   
Sbjct: 153 GYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVV 212

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
           ++  LL  +C +    +A+ V   +       N   +  I++ +   GR   A +   R 
Sbjct: 213 TYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRL 272

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK---- 544
               +  D VSYT  ++GL    R E+   L+++M      PN  T+ +++  FC+    
Sbjct: 273 SSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMV 332

Query: 545 ERNIKMVKRL 554
           ER I++++++
Sbjct: 333 ERAIQVLEQM 342



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 65/151 (43%), Gaps = 7/151 (4%)

Query: 410 QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
           +A +L +    +G  PD Y    L+R LC   +  +A  V +    +  AV+   +  +V
Sbjct: 92  RAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 151

Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPL--DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIA 527
                AG C        R ++   P+  D  +YT  IRGL + GR  EA  L   M H  
Sbjct: 152 -----AGYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRG 206

Query: 528 VPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
             P+  TY V+L + CK         +L ++
Sbjct: 207 CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEM 237



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/210 (20%), Positives = 84/210 (40%), Gaps = 4/210 (1%)

Query: 115 CVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI 174
           C     T+   L      E      E   EM +    PN    N+++    + G +D  I
Sbjct: 484 CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAI 543

Query: 175 KVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCF 230
           +++++       PN +++N  L  + K  +     +++  +V  G  P++  +  ++   
Sbjct: 544 ELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVL 603

Query: 231 CKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNV 290
            +  R+ EA ++  ++  LG       +  ++    +    D A   +  MV NGC PN 
Sbjct: 604 SREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNE 663

Query: 291 VTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           +TY +LI+G             L  L S G
Sbjct: 664 LTYITLIEGLANEDFLKETRDLLRELCSRG 693


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 119/505 (23%), Positives = 227/505 (44%), Gaps = 49/505 (9%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR      ++ ++   GC     T+ + L    +   +G  +E  DEM   G TPN    
Sbjct: 159 GRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTY 218

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N++++ + + GRVD   + L         P+ +S+   L  LC      +V+++   M+ 
Sbjct: 219 NVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMME 278

Query: 214 KGFYPN-------VRMF----------------------------EILLNCFCKMGRIAE 238
           K   PN       VR F                             I++N  CK GR+ +
Sbjct: 279 KNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDD 338

Query: 239 AYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIK 298
           A+Q L  M + G S    ++T ++ G  R  R + A  L ++MV+  C PN VT+ + I 
Sbjct: 339 AFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFIC 398

Query: 299 GFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP 358
              +  +   A   ++ +   G   ++V +N L++     G  D AL+++     +   P
Sbjct: 399 ILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF---YSMPCKP 455

Query: 359 DSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLY 415
           ++ T+ +LL+ +C + R     +L+  +   +   ++V +N L+S+FC+ G  ++A++L 
Sbjct: 456 NTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELV 515

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
             M++ G TP+  ++  LL G+      +EA+ +  G+V N  + +   +++I+  L   
Sbjct: 516 EQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSRE 575

Query: 476 GRCHKAIQLFRRAIVEKYPL--DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
            R  +AI++F   IV+   +    V Y   +  L +   T+ A   ++ M      PN  
Sbjct: 576 DRVEEAIKMFH--IVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNEL 633

Query: 534 TYRVMLLSFCKERNIKMVKRLLQDV 558
           TY  ++     E  +K  + LL+++
Sbjct: 634 TYITLIEGLANEDFLKETRDLLREL 658



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/411 (25%), Positives = 190/411 (46%), Gaps = 18/411 (4%)

Query: 77  RDYFHDVQSF---DHMISVVTRLTG-----RFETVRGIVGELARVGCVIKAQTFLLFLRI 128
           R++ + + S+      +S  T L G     R+E V  +  E+    C+    TF + +R 
Sbjct: 235 REFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRF 294

Query: 129 YWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PN 184
           + RG M    ++  ++M   G   NT   NIV++ + K GRVD   + L         P+
Sbjct: 295 FCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPD 354

Query: 185 FLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLG 244
            +S+   L  LC+     + K+++  MVRK   PN   F   +   C+ G I +A  L+ 
Sbjct: 355 TISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIE 414

Query: 245 LMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
            M   G  +++  +  L++GF    R+D A  L+  M    C PN +TYT+L+ G   A+
Sbjct: 415 QMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAE 471

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
               A   L  +  +  AP++V  NVL+    + G  D+A+++ + ++E    P+  T+ 
Sbjct: 472 RLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYN 531

Query: 365 SLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
           +LL  +          +L+ GL    V  D+V Y++++    +     +A+K+++ + D 
Sbjct: 532 TLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDL 591

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
           G  P    +  +L  LC     D AI+ +  +V N    N   +  +++ L
Sbjct: 592 GMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGL 642



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 127/608 (20%), Positives = 253/608 (41%), Gaps = 51/608 (8%)

Query: 40  THQDFPIILAPHIVHSTL--LNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLT 97
           T  + P   +P+  ++ L  L    DL   +  +  A  R    DV     +I  + R  
Sbjct: 33  TRPEAPSASSPNPANARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCR-R 91

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR      ++    R G  +    +   +  Y R   YG +  A   +      P+ +  
Sbjct: 92  GRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCR---YGQLDAARRLIASMPVAPDAYTY 148

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
             ++  L   GRV   + +L +       P+ +++ + L  +CK        +V+  M  
Sbjct: 149 TPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRA 208

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           KG  PN+  + +++N  C+ GR+ +A + L  + + G      ++T ++ G    +R + 
Sbjct: 209 KGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWED 268

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
              L+ +M++  C PN VT+  L++ F    M   A   L+ +   G A +    N++I+
Sbjct: 269 VEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVIN 328

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLV------ 383
            + K G  DDA    + +      PD+ ++ ++L  +C + R+     LL ++V      
Sbjct: 329 TICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPP 388

Query: 384 ---------CGL-------------------EVEADLVVYNALLSYFCKAGFPNQAVKLY 415
                    C L                     E ++V YNAL++ FC  G  + A++L+
Sbjct: 389 NEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF 448

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
            +M  K   P+  ++  LL GLC A ++D A  +   ++  + A N      +V    + 
Sbjct: 449 YSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQK 505

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
           G   +AI+L  + +      ++++Y   + G+     +EEA  L   +    V P+  TY
Sbjct: 506 GLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTY 565

Query: 536 RVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCN 595
             ++    +E  ++   ++   V D  +        ++   + K  ++  A++    M +
Sbjct: 566 SSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVS 625

Query: 596 LGLIPDEM 603
            G +P+E+
Sbjct: 626 NGCMPNEL 633



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/210 (20%), Positives = 83/210 (39%), Gaps = 4/210 (1%)

Query: 115 CVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI 174
           C     T+   L      E      E   EM +    PN    N+++    + G +D  I
Sbjct: 453 CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAI 512

Query: 175 KVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCF 230
           +++++       PN +++N  L  +    +     +++  +V  G  P++  +  ++   
Sbjct: 513 ELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVL 572

Query: 231 CKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNV 290
            +  R+ EA ++  ++  LG       +  ++    +    D A   +  MV NGC PN 
Sbjct: 573 SREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNE 632

Query: 291 VTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           +TY +LI+G             L  L S G
Sbjct: 633 LTYITLIEGLANEDFLKETRDLLRELCSRG 662


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 113/427 (26%), Positives = 194/427 (45%), Gaps = 26/427 (6%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDV 207
           PN    + ++D L K GR      +  E Q     P+  ++N  +   C     S+ + +
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
           +  M+ +   P+V  +  L+N F K G+  EA +L   M+  G   +   ++ +IDGF +
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
             RLD A +++  M   GCSPN++T+ +LI G+  AK        L  +   G   D   
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-------FSLLP 380
           +N LI     +G  + ALD+   ++   L PD  T  +LL  +C +G+       F ++ 
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492

Query: 381 KLVCGLE-------VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
           K    L+       VE D+  YN L+S     G   +A +LY  M  +G  PD  ++  +
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF----RRAI 489
           + GLC   ++DEA  ++  +   + + N    T +++   +AGR    ++LF    RR I
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI 612

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
           V     + ++Y   I G  + G    A  ++ +M    V P+  T R ML     +  +K
Sbjct: 613 VA----NAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELK 668

Query: 550 MVKRLLQ 556
               +L+
Sbjct: 669 RAVAMLE 675



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 115/457 (25%), Positives = 215/457 (47%), Gaps = 24/457 (5%)

Query: 136 GMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ-----LPNFLS 187
           G ++EA    D M   G  P       ++D + KIG     + +L++ +     +PN + 
Sbjct: 198 GRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVI 257

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           ++  + +LCK    S+ +++   M  KG +P++  +  ++  FC  GR ++A QLL  M+
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
               S  V  +  LI+ F +  +   A  L+++M+  G  PN +TY+S+I GF +     
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLD 377

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A     ++ ++G +P+L+  N LID        DD +++   + E  LV D+ T+ +L+
Sbjct: 378 AAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437

Query: 368 STVCLSGRFS----LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM----- 418
               L G  +    LL +++    +  D+V  + LL   C  G    A++++  M     
Sbjct: 438 HGFYLVGDLNAALDLLQEMISS-GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496

Query: 419 -LD-----KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
            LD      G  PD  ++  L+ GL    K  EA  +Y+ +       +   +++++D L
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
            +  R  +A Q+F     + +  +VV++T  I G  + GR ++   L+ +M    +  NA
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA 616

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
            TY  ++  F K  NI     + Q++I + +  D  T
Sbjct: 617 ITYITLICGFRKVGNINGALDIFQEMISSGVYPDTIT 653



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 140/650 (21%), Positives = 266/650 (40%), Gaps = 104/650 (16%)

Query: 53  VHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELAR 112
           +  TL     +     F     K +  FH+++  +  I + + +  R   +  +V     
Sbjct: 27  IRDTLAKASGESCEAGFGGESLKLQSGFHEIKGLEDAIDLFSDML-RSRPLPSVVDFCKL 85

Query: 113 VGCVIKAQTFLLFLRIYWRGE---------MYGMVLEAFDEMGRFGFTPNTFARNIVMDV 163
           +G V++ +   L + +Y + E          + ++++ F    +  F  +TF        
Sbjct: 86  MGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFG------- 138

Query: 164 LFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMF 223
                      K+ K    P+ ++FN  L  LC  + VS   ++   M      PNV  F
Sbjct: 139 -----------KITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTF 187

Query: 224 EILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQ 283
             L+N  C+ GRI EA  LL  M+  G   +   +  ++DG  ++     A  L  KM +
Sbjct: 188 TTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEE 247

Query: 284 -NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
            +   PNVV Y+++I    +    S A +    ++ +G  PDL  +N +I      G + 
Sbjct: 248 ISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWS 307

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF--------SLLPKLVCGLEVEADLVV 394
           DA  +   +LE K+ PD  T+ +L++     G+F         +LP+ +       + + 
Sbjct: 308 DAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII-----PNTIT 362

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ--- 451
           Y++++  FCK    + A  ++  M  KG +P+  +F  L+ G CGA++ID+ + +     
Sbjct: 363 YSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT 422

Query: 452 --GIVMNNPAVNAHVH------------------------------TAIVDRLIEAGRCH 479
             G+V +    N  +H                                ++D L + G+  
Sbjct: 423 ETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLK 482

Query: 480 KAIQLF------RRAIVEKYPL-----DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAV 528
            A+++F      ++ +   +P      DV +Y + I GL+  G+  EA  LY +M H  +
Sbjct: 483 DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542

Query: 529 PPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVN 588
            P+  TY  M+   CK+  +    ++   +       +    +  T  I  +  +    +
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNV---VTFTTLINGYCKAGRVDD 599

Query: 589 QLVEMCNLGLIPDEMWRKLGLLSDETMTPVSLFDGFVPCERRAGNANHLL 638
            L   C +G        + G++++  +T ++L  GF    R+ GN N  L
Sbjct: 600 GLELFCEMG--------RRGIVAN-AITYITLICGF----RKVGNINGAL 636



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 92/400 (23%), Positives = 174/400 (43%), Gaps = 19/400 (4%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           +++  F D+ +++ MI V    +GR+     ++ E+          T+   +  + +   
Sbjct: 282 QEKGIFPDLFTYNSMI-VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV--LKETQ--LPNFLSFNI 190
           +    E +DEM   G  PNT   + ++D   K  R+D    +  L  T+   PN ++FN 
Sbjct: 341 FFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNT 400

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +   C    + +  +++  M   G   +   +  L++ F  +G +  A  LL  MI+ G
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQ-----------NGCSPNVVTYTSLIKG 299
               +     L+DG     +L  A  +++ M +           NG  P+V TY  LI G
Sbjct: 461 LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISG 520

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
            +    F  A    + +   G  PD + ++ +ID L K    D+A  ++D +      P+
Sbjct: 521 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPN 580

Query: 360 SYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYN 416
             TF +L++  C +GR     +L C +    + A+ + Y  L+  F K G  N A+ ++ 
Sbjct: 581 VVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQ 640

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            M+  G  PD  +   +L GL    ++  A+ + + + M+
Sbjct: 641 EMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMS 680


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 113/427 (26%), Positives = 194/427 (45%), Gaps = 26/427 (6%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDV 207
           PN    + ++D L K GR      +  E Q     P+  ++N  +   C     S+ + +
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
           +  M+ +   P+V  +  L+N F K G+  EA +L   M+  G   +   ++ +IDGF +
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
             RLD A +++  M   GCSPN++T+ +LI G+  AK        L  +   G   D   
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-------FSLLP 380
           +N LI     +G  + ALD+   ++   L PD  T  +LL  +C +G+       F ++ 
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492

Query: 381 KLVCGLE-------VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
           K    L+       VE D+  YN L+S     G   +A +LY  M  +G  PD  ++  +
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF----RRAI 489
           + GLC   ++DEA  ++  +   + + N    T +++   +AGR    ++LF    RR I
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI 612

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
           V     + ++Y   I G  + G    A  ++ +M    V P+  T R ML     +  +K
Sbjct: 613 VA----NAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELK 668

Query: 550 MVKRLLQ 556
               +L+
Sbjct: 669 RAVAMLE 675



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 114/457 (24%), Positives = 214/457 (46%), Gaps = 24/457 (5%)

Query: 136 GMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ-----LPNFLS 187
           G ++EA    D M   G  P       ++D + K G     + +L++ +     +PN + 
Sbjct: 198 GRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVI 257

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           ++  + +LCK    S+ +++   M  KG +P++  +  ++  FC  GR ++A QLL  M+
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
               S  V  +  LI+ F +  +   A  L+++M+  G  PN +TY+S+I GF +     
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLD 377

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A     ++ ++G +P+L+  N LID        DD +++   + E  LV D+ T+ +L+
Sbjct: 378 AAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437

Query: 368 STVCLSGRFS----LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM----- 418
               L G  +    LL +++    +  D+V  + LL   C  G    A++++  M     
Sbjct: 438 HGFYLVGDLNAALDLLQEMISS-GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496

Query: 419 -LD-----KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
            LD      G  PD  ++  L+ GL    K  EA  +Y+ +       +   +++++D L
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
            +  R  +A Q+F     + +  +VV++T  I G  + GR ++   L+ +M    +  NA
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA 616

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
            TY  ++  F K  NI     + Q++I + +  D  T
Sbjct: 617 ITYITLICGFRKVGNINGALDIFQEMISSGVYPDTIT 653



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 93/433 (21%), Positives = 188/433 (43%), Gaps = 33/433 (7%)

Query: 170 VDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
           +DL   +L+   LP+ + F   +  + ++     V  +   M RK    ++  F IL+ C
Sbjct: 64  IDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKC 123

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
           FC   ++  A    G +  LG    V  +T L+ G     R+  A   + +M +  C PN
Sbjct: 124 FCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPN 183

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
           VVT+T+L+ G         A + LD +  +G  P  + +  ++D + K G    AL++  
Sbjct: 184 VVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLR 243

Query: 350 GLLELK-LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFP 408
            + E+  ++P+                                +V+Y+A++   CK G  
Sbjct: 244 KMEEVSHIIPN--------------------------------VVIYSAIIDSLCKDGRH 271

Query: 409 NQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAI 468
           + A  L+  M +KG  PD +++  ++ G C + +  +A  + Q ++    + +   + A+
Sbjct: 272 SDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNAL 331

Query: 469 VDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAV 528
           ++  ++ G+  +A +L+   +      + ++Y+  I G  +  R + A  ++  M     
Sbjct: 332 INAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGC 391

Query: 529 PPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVN 588
            PN  T+  ++  +C  + I     LL ++ +  +  D  T   L    +     ++A++
Sbjct: 392 SPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALD 451

Query: 589 QLVEMCNLGLIPD 601
            L EM + GL PD
Sbjct: 452 LLQEMISSGLCPD 464



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 92/400 (23%), Positives = 174/400 (43%), Gaps = 19/400 (4%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           +++  F D+ +++ MI V    +GR+     ++ E+          T+   +  + +   
Sbjct: 282 QEKGIFPDLFTYNSMI-VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV--LKETQ--LPNFLSFNI 190
           +    E +DEM   G  PNT   + ++D   K  R+D    +  L  T+   PN ++FN 
Sbjct: 341 FFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNT 400

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +   C    + +  +++  M   G   +   +  L++ F  +G +  A  LL  MI+ G
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQ-----------NGCSPNVVTYTSLIKG 299
               +     L+DG     +L  A  +++ M +           NG  P+V TY  LI G
Sbjct: 461 LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISG 520

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
            +    F  A    + +   G  PD + ++ +ID L K    D+A  ++D +      P+
Sbjct: 521 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPN 580

Query: 360 SYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYN 416
             TF +L++  C +GR     +L C +    + A+ + Y  L+  F K G  N A+ ++ 
Sbjct: 581 VVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQ 640

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            M+  G  PD  +   +L GL    ++  A+ + + + M+
Sbjct: 641 EMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMS 680



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 89/378 (23%), Positives = 157/378 (41%), Gaps = 46/378 (12%)

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           L  GF  ++ L+ A  L+  M+++   P+VV +  L+   +  +   +  S    +E + 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
              D+   N+LI C         AL  +  + +L L PD  TF +LL  +C+  R S   
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVS--- 166

Query: 381 KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
                                        +A+  ++ M +    P+  +F  L+ GLC  
Sbjct: 167 -----------------------------EALDFFHQMFETTCRPNVVTFTTLMNGLCRE 197

Query: 441 RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR-AIVEKYPLDVVS 499
            +I EA+ +   ++ +        +  IVD + + G    A+ L R+   V     +VV 
Sbjct: 198 GRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVI 257

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           Y+  I  L + GR  +A  L+++M+   + P+ +TY  M++ FC        ++LLQ+++
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317

Query: 560 DARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTPVS 619
           + +I  D  T   L     K      A     EM   G+IP+            T+T  S
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN------------TITYSS 365

Query: 620 LFDGFVPCERRAGNANHL 637
           + DGF   + R   A H+
Sbjct: 366 MIDGFCK-QNRLDAAEHM 382


>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
 gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
          Length = 439

 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 119/443 (26%), Positives = 210/443 (47%), Gaps = 24/443 (5%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDV 207
           PN F  ++++  L K GR+   +    ++L+   +PN    N+ L +LC+   +      
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQ---- 56

Query: 208 IGMMVRKGFY--PNVRMFEILLNCFCKMGRIAEAYQLLGLM-ITLGTSLSVNAWTVLIDG 264
             M + +G    P+V    IL+N FC++  + +A +L   M            +T +I  
Sbjct: 57  -AMAIFRGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKC 115

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL-DMLESEGHAP 323
           + ++ RLD A  L E+   + CS +V+  TS+ +GF +A+    A+  L DM+E +   P
Sbjct: 116 YCKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKP 173

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV 383
           D+V  NV+I    K G   +A ++ + L+ +  VP++ T+ +L+   C SG  S   +L 
Sbjct: 174 DIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLF 233

Query: 384 CGLE-----VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
             L       E ++V +NAL+S  CKA     A +L   M  +    D +++  L+ GLC
Sbjct: 234 KVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLC 293

Query: 439 GARKIDEAINVYQGIVMN--NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
              +  E   V++ ++    NP+V    +T +V    +AG    A Q+ R  + +  P D
Sbjct: 294 KQGRTSEVSRVFEEMLREGCNPSVV--TYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPD 351

Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
           V +YTV + GL E G+   A   + ++     PP A  Y  ++   CK   +    +   
Sbjct: 352 VTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYV 411

Query: 557 DVIDARIELDYHTSIRLTKFIFK 579
           +++D R+  D  T   L + + K
Sbjct: 412 EMLDRRLAPDPATCKLLVEMLCK 434



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 110/465 (23%), Positives = 192/465 (41%), Gaps = 76/465 (16%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET 180
           TF + +    +    G  +E +++M      PN    N+++  L + G +D  + + +  
Sbjct: 5   TFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAIFRGI 64

Query: 181 QL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK-GFYPNVRMFEILLNCFCKMGR--- 235
           Q  P+ ++ NI +   C+L  +    ++   M +     P    +  ++ C+CKM R   
Sbjct: 65  QCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQ 124

Query: 236 ------------------------------IAEAYQLLGLMITLGTSL-SVNAWTVLIDG 264
                                         + EAYQLL  M+   ++   + AW V+I G
Sbjct: 125 ARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHG 184

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH--A 322
           F +  R+  A  + E +V  GC PN VTYT+LI GF ++   S A     +L S  H   
Sbjct: 185 FCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAE 244

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL 382
           P++V  N LI  L K    + A ++   +    L  D++T+ +L+  +C  GR S + ++
Sbjct: 245 PNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRV 304

Query: 383 VCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
              +  E     +V Y  L+   CKAG    A ++  +M+ KG  PD  ++  LL G   
Sbjct: 305 FEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEG--- 361

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
                                           L E G+   A + F + + E+ P   V 
Sbjct: 362 --------------------------------LFENGKVRTATEFFEKILRERCPPCAVV 389

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
           Y+  +RG  +    +EA   Y +M    + P+  T ++++   CK
Sbjct: 390 YSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCK 434



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 110/249 (44%), Gaps = 9/249 (3%)

Query: 136 GMVLEAFD---EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK------ETQLPNFL 186
           G V EA++    +   G  PN      ++D   K G +   +++ K          PN +
Sbjct: 189 GRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVV 248

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           +FN  +  LCK + + +  +++  M  +    +   +  L++  CK GR +E  ++   M
Sbjct: 249 TFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEM 308

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
           +  G + SV  +T L+    +   L  A  +   MV  G  P+V TYT L++G  E    
Sbjct: 309 LREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKV 368

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
             A  F + +  E   P  V ++ L+    K    D+A+  Y  +L+ +L PD  T   L
Sbjct: 369 RTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLL 428

Query: 367 LSTVCLSGR 375
           +  +C  GR
Sbjct: 429 VEMLCKRGR 437



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 113/251 (45%), Gaps = 6/251 (2%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGF--TPNTF 155
           GR      ++  L  +GCV  A T+   +  + +       L+ F  +        PN  
Sbjct: 189 GRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVV 248

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKETQLPNF----LSFNIALCNLCKLNDVSNVKDVIGMM 211
             N ++  L K  R++   +++K+ +  +      ++   +  LCK    S V  V   M
Sbjct: 249 TFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEM 308

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
           +R+G  P+V  +  L++  CK G + +A Q++  M+  G    V  +TVL++G     ++
Sbjct: 309 LREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKV 368

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
             A   +EK+++  C P  V Y++L++G  +A +   A  +   +     APD     +L
Sbjct: 369 RTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLL 428

Query: 332 IDCLSKMGSYD 342
           ++ L K G  D
Sbjct: 429 VEMLCKRGRTD 439



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 73/321 (22%), Positives = 128/321 (39%), Gaps = 14/321 (4%)

Query: 288 PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
           PN  T++ LI G  +A     A    + +      P+L   N+L+  L + G+ D A+ +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60

Query: 348 YDGLLELKLVPDSYTFCSLLSTVC----LSGRFSLLPKLVCGLEVEADLVVYNALLSYFC 403
           + G+   +  P   T   L++  C    L     L  ++     +  +   Y A++  +C
Sbjct: 61  FRGI---QCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117

Query: 404 KAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAH 463
           K    +QA +L         + D  +   + RG C A+++DEA  +   +V    A    
Sbjct: 118 KMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDI 175

Query: 464 VH-TAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY-- 520
           V    I+    +AGR  +A ++    +      + V+YT  I G  + G   EA  L+  
Sbjct: 176 VAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKV 235

Query: 521 -SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK 579
            S   H A  PN  T+  ++   CK   ++    L++ +    +  D  T   L   + K
Sbjct: 236 LSSRDHHA-EPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCK 294

Query: 580 FHSSSSAVNQLVEMCNLGLIP 600
              +S       EM   G  P
Sbjct: 295 QGRTSEVSRVFEEMLREGCNP 315


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 177/356 (49%), Gaps = 7/356 (1%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR +    ++ ++ R GCV    T+ + L    +   Y   ++  DEM   G  P+    
Sbjct: 166 GRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTY 225

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N+V++ + + GRVD  ++ LK        PN +S+NI L  LC      + + ++  M R
Sbjct: 226 NVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSR 285

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           KG  PNV  F +L++  C+ G +  A ++L  +   G + +  ++  ++  F + +++D 
Sbjct: 286 KGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDR 345

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A    E MV +GC P++V+Y +L+           A   L  L+ +G  P L+ +N +ID
Sbjct: 346 AMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVID 405

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEA 390
            L+K G  ++AL++ + ++   L PD  T+ ++ S +C  GR     K  C ++   +  
Sbjct: 406 GLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRP 465

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
           + V+YNA+L   CK    + A+ L+  M+  G  P+  ++  L+ GL     + EA
Sbjct: 466 NTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEA 521



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/411 (24%), Positives = 190/411 (46%), Gaps = 4/411 (0%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGM 210
           P+  + N ++      G++D   +++    + P+  ++N  +  LC      N   V+  
Sbjct: 118 PDVMSYNAMVAGYCVTGQLDNARRLVAAMPMEPDTYTYNTLIRGLCGRGRTDNALAVLDD 177

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M+R+G  P+V  + ILL   CK     +A +LL  M   G +  +  + V+++G  +  R
Sbjct: 178 MLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGR 237

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           +D A    + +   GC PN V+Y  ++KG   A+ +  A   +  +  +G  P++V  N+
Sbjct: 238 VDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNM 297

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLE 387
           LI  L + G  + A+++ D + +    P+S ++  +L   C   +        +L+    
Sbjct: 298 LISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSG 357

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
              D+V YN LL+  C+ G  + AV+L + + DKG TP   S+  ++ GL  A K +EA+
Sbjct: 358 CYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEAL 417

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            +   +V      +   ++ I   L   GR  +AI+ F +        + V Y   + GL
Sbjct: 418 ELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGL 477

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
            +   T  A  L++ M      PN  TY +++     E  +K  + ++ ++
Sbjct: 478 CKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAEL 528



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/420 (21%), Positives = 171/420 (40%), Gaps = 70/420 (16%)

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
           P+V  +  ++  +C  G++  A +L+  M     + + N    LI G     R D A  +
Sbjct: 118 PDVMSYNAMVAGYCVTGQLDNARRLVAAMPMEPDTYTYN---TLIRGLCGRGRTDNALAV 174

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
            + M++ GC P+VVTYT L++   +   +  A   LD +  +G APD+V +NV+++ + +
Sbjct: 175 LDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQ 234

Query: 338 MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNA 397
            G  DDA++                                LP   C    E + V YN 
Sbjct: 235 EGRVDDAMEF----------------------------LKSLPSYGC----EPNTVSYNI 262

Query: 398 LLS-----------------------------------YFCKAGFPNQAVKLYNTMLDKG 422
           +L                                    + C+ G    A+++ + +   G
Sbjct: 263 VLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYG 322

Query: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI 482
            TP++ S+  +L   C  +K+D A+   + +V +    +   +  ++  L   G    A+
Sbjct: 323 CTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAV 382

Query: 483 QLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
           +L  +   +     ++SY   I GL + G+TEEA  L ++M    + P+  TY  +    
Sbjct: 383 ELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGL 442

Query: 543 CKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
           C+E  I+   +    V D  I  +      +   + K  ++ SA++    M + G +P+E
Sbjct: 443 CREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNE 502



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 109/243 (44%), Gaps = 5/243 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           +V +F+ +IS + R  G  E    I+ ++ + GC   + ++   L  + + +     +  
Sbjct: 291 NVVTFNMLISFLCR-RGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAF 349

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
            + M   G  P+  + N ++  L + G VD  +++L + +     P  +S+N  +  L K
Sbjct: 350 VELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTK 409

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
                   +++  MV KG  P++  +  + +  C+ GRI EA +    +  +G   +   
Sbjct: 410 AGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVL 469

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  ++ G  + R    A  L+  MV NGC PN  TYT LI+G     +   A   +  L 
Sbjct: 470 YNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELC 529

Query: 318 SEG 320
           S G
Sbjct: 530 SRG 532


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 198/419 (47%), Gaps = 11/419 (2%)

Query: 136 GMVLEAFD---EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV----LKETQLPNFLSF 188
           G V EA     E+   GF+P+    N +++   +IG V+  + +    +++   P+  ++
Sbjct: 242 GRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTY 301

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           N  +  +CKL +     +++  M+ +   PN   +  L++  CK   I  A  L  ++++
Sbjct: 302 NSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVS 361

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
            G    V  +  LI G    +  D+A  ++E+M   GC P+  TY+ LI      +    
Sbjct: 362 KGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKE 421

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A   L  +ES G A + V +N LID L K    +DA +++D +  L +   S T+ +L+ 
Sbjct: 422 ALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLID 481

Query: 369 TVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
            +C + R     +L+  + +E    D   YN+LL+YFC+ G   +A  +  TM   G  P
Sbjct: 482 GLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEP 541

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           D +++  L+ GLC A ++D A  + + + M    +  H +  ++  L    R  + ++LF
Sbjct: 542 DIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLF 601

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLE-GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           R  + +  P D +++ +  RGL   GG  +EA     +M    + P   ++  +    C
Sbjct: 602 REMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLC 660



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 116/444 (26%), Positives = 207/444 (46%), Gaps = 10/444 (2%)

Query: 161 MDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV 220
           ++ L KI   +LG K       P+   +NIAL  L + N +  V+ +   MV +G   +V
Sbjct: 106 IENLLKILENELGFK-------PDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDV 158

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
             F +L+   CK  ++  A  +L  M   G       +T L+ GF     L+ A  + ++
Sbjct: 159 STFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQ 218

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           M+  GC    V+   L+ GF +      A  F+  +  EG +PD V  N L++   ++G+
Sbjct: 219 MLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGN 278

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNA 397
            +DALD+ D ++E    PD YT+ SL+S +C  G F    +++  +   E   + V YN 
Sbjct: 279 VNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNT 338

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
           L+S  CK      A  L   ++ KG  PD  +F  L++GLC ++  D A+ +++ +    
Sbjct: 339 LISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKG 398

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAY 517
              +   ++ ++D L    R  +A+ L +         + V Y   I GL +  R E+A 
Sbjct: 399 CKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAE 458

Query: 518 ILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFI 577
            ++ QM+ + V  ++ TY  ++   CK + ++   +L+  +I   ++ D  T   L  + 
Sbjct: 459 EIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYF 518

Query: 578 FKFHSSSSAVNQLVEMCNLGLIPD 601
            +      A + +  M + G  PD
Sbjct: 519 CRVGDIEKAGDIVQTMASNGCEPD 542



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 115/492 (23%), Positives = 228/492 (46%), Gaps = 16/492 (3%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIY-WRGEMYGMVLE 140
           DV +F+ +I  + +   +      ++ E+A  G      TF   ++ +   G++ G  L+
Sbjct: 157 DVSTFNVLIKALCK-AHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNG-ALK 214

Query: 141 AFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIK----VLKETQLPNFLSFNIALCNLC 196
              +M  +G      +  ++++   K GRV+  ++    V +E   P+ ++FN  +   C
Sbjct: 215 MKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFC 274

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
           ++ +V++  D++  M+ KGF P+V  +  L++  CK+G   +A ++L  MI    S +  
Sbjct: 275 RIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTV 334

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
            +  LI    +   ++ A  L   +V  G  P+V T+ +LI+G   +K   IA    + +
Sbjct: 335 TYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEM 394

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
           +++G  PD   +++LID L       +AL +   +       ++  + +L+  +C S R 
Sbjct: 395 KNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRI 454

Query: 377 SLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
               ++   +E   V    V YN L+   CK     +A +L + M+ +G  PD +++  L
Sbjct: 455 EDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSL 514

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           L   C    I++A ++ Q +  N    +   +  ++  L  AGR   A +L R   ++  
Sbjct: 515 LTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGI 574

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
            L   +Y   I+ L    RT+E   L+ +M   + PP+A T++++    C          
Sbjct: 575 VLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGP----- 629

Query: 554 LLQDVIDARIEL 565
            +Q+ ID  +E+
Sbjct: 630 -IQEAIDFTVEM 640



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 112/553 (20%), Positives = 241/553 (43%), Gaps = 44/553 (7%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           +  F+++  ++ +L   G +  A TF   ++ +        +L+  +     GF P+T  
Sbjct: 68  SSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILE--NELGFKPDTNF 125

Query: 157 RNIVMDVLFKIGRVDL----GIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            NI ++ L +  ++ L      K++ E  + +  +FN+ +  LCK + +     ++  M 
Sbjct: 126 YNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMA 185

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
             G  P+   F  L+  F + G +  A ++   M+  G  L+  +  VL++GF +  R++
Sbjct: 186 NHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVE 245

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A     ++ + G SP+ VT+ SL+ GF      + A   +D +  +G  PD+  +N LI
Sbjct: 246 EALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLI 305

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL---LPKLVCGLEVE 389
             + K+G ++ A+++   ++  +  P++ T+ +L+S +C          L +++    + 
Sbjct: 306 SGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLL 365

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV------------------ 431
            D+  +N L+   C +   + A++++  M +KG  PD +++                   
Sbjct: 366 PDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALML 425

Query: 432 -----------------GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
                             L+ GLC +R+I++A  ++  + +   + ++  +  ++D L +
Sbjct: 426 LKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCK 485

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
             R  +A QL  + I+E    D  +Y   +      G  E+A  +   M      P+ +T
Sbjct: 486 NKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFT 545

Query: 535 YRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMC 594
           Y  ++   C+   + +  +LL+ V    I L  H    + + +F    +   +    EM 
Sbjct: 546 YGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMM 605

Query: 595 NLGLIPDEMWRKL 607
                PD +  K+
Sbjct: 606 EKSDPPDALTHKI 618



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 102/430 (23%), Positives = 174/430 (40%), Gaps = 78/430 (18%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR E     V E++  G      TF   +  + R       L+  D M   GF P+ +  
Sbjct: 242 GRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTY 301

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N ++  + K+G  +  I++L++  L    PN +++N  +  LCK N++    D+  ++V 
Sbjct: 302 NSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVS 361

Query: 214 KGFYPNV--------------------RMFE---------------ILLNCFCKMGRIAE 238
           KG  P+V                     MFE               IL++  C   R+ E
Sbjct: 362 KGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKE 421

Query: 239 AYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIK 298
           A  LL  M + G + +   +  LIDG  + RR++ A  ++++M   G S + VTY +LI 
Sbjct: 422 ALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLID 481

Query: 299 GFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP 358
           G  + K    A   +D +  EG  PD   +N L+    ++G  + A D+   +      P
Sbjct: 482 GLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEP 541

Query: 359 DSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---------------------------- 390
           D +T+ +L+  +C +GR  +  KL+  ++++                             
Sbjct: 542 DIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLF 601

Query: 391 ----------DLVVYNALLSYFCKAGFP-NQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
                     D + +  +    C  G P  +A+     ML+KG  P+  SF  L  GLC 
Sbjct: 602 REMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLCS 661

Query: 440 ARKIDEAINV 449
               D  I +
Sbjct: 662 LSMEDTLIEL 671


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 113/427 (26%), Positives = 194/427 (45%), Gaps = 26/427 (6%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDV 207
           PN    + ++D L K GR      +  E Q     P+  ++N  +   C     S+ + +
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
           +  M+ +   P+V  +  L+N F K G+  EA +L   M+  G   +   ++ +IDGF +
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
             RLD A +++  M   GCSPN++T+ +LI G+  AK        L  +   G   D   
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-------FSLLP 380
           +N LI     +G  + ALD+   ++   L PD  T  +LL  +C +G+       F ++ 
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492

Query: 381 KLVCGLE-------VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
           K    L+       VE D+  YN L+S     G   +A +LY  M  +G  PD  ++  +
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF----RRAI 489
           + GLC   ++DEA  ++  +   + + N    T +++   +AGR    ++LF    RR I
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI 612

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
           V     + ++Y   I G  + G    A  ++ +M    V P+  T R ML     +  +K
Sbjct: 613 VA----NAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELK 668

Query: 550 MVKRLLQ 556
               +L+
Sbjct: 669 RAVAMLE 675



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 114/457 (24%), Positives = 214/457 (46%), Gaps = 24/457 (5%)

Query: 136 GMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ-----LPNFLS 187
           G ++EA    D M   G  P       ++D + K G     + +L++ +     +PN + 
Sbjct: 198 GRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVI 257

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           ++  + +LCK    S+ +++   M  KG +P++  +  ++  FC  GR ++A QLL  M+
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
               S  V  +  LI+ F +  +   A  L+++M+  G  PN +TY+S+I GF +     
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLD 377

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A     ++ ++G +P+L+  N LID        DD +++   + E  LV D+ T+ +L+
Sbjct: 378 AAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437

Query: 368 STVCLSGRFS----LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM----- 418
               L G  +    LL +++    +  D+V  + LL   C  G    A++++  M     
Sbjct: 438 HGFYLVGDLNAALDLLQEMISS-GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496

Query: 419 -LD-----KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
            LD      G  PD  ++  L+ GL    K  EA  +Y+ +       +   +++++D L
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
            +  R  +A Q+F     + +  +VV++T  I G  + GR ++   L+ +M    +  NA
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA 616

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
            TY  ++  F K  NI     + Q++I + +  D  T
Sbjct: 617 ITYITLICGFRKVGNINGALDIFQEMISSGVYPDTIT 653



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 133/645 (20%), Positives = 265/645 (41%), Gaps = 94/645 (14%)

Query: 53  VHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELAR 112
           +  TL     +     F     K +  FH+++  +  I + + +  R   +  +V     
Sbjct: 27  IRDTLAKASGESCEAGFGGESLKLQSGFHEIKGLEDAIDLFSDML-RSRPLPSVVDFCKL 85

Query: 113 VGCVIKAQTFLLFLRIYWRGE---------MYGMVLEAFDEMGRFGFTPNTFARNIVMDV 163
           +G V++ +   L + +Y + E          + ++++ F    +  F  +TF        
Sbjct: 86  MGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFG------- 138

Query: 164 LFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMF 223
                      K+ K    P+ ++FN  L  LC  + VS   ++   M      PNV  F
Sbjct: 139 -----------KITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTF 187

Query: 224 EILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR----------LRRLDM 273
             L+N  C+ GRI EA  LL  M+  G   +   +  ++DG  +          LR+++ 
Sbjct: 188 TTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEE 247

Query: 274 AGY--------------------------LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
             +                          L+ +M + G  P++ TY S+I GF  +  +S
Sbjct: 248 VSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWS 307

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A   L  +     +PD+V +N LI+   K G + +A ++YD +L   ++P++ T+ S++
Sbjct: 308 DAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMI 367

Query: 368 STVCLSGRFSLLPK---LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
              C   R         L+       +L+ +N L+  +C A   +  ++L + M + G  
Sbjct: 368 DGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLV 427

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
            D  ++  L+ G      ++ A+++ Q ++ +    +      ++D L + G+   A+++
Sbjct: 428 ADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEM 487

Query: 485 F------RRAIVEKYPL-----DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
           F      ++ +   +P      DV +Y + I GL+  G+  EA  LY +M H  + P+  
Sbjct: 488 FKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTI 547

Query: 534 TYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEM 593
           TY  M+   CK+  +    ++   +       +    +  T  I  +  +    + L   
Sbjct: 548 TYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNV---VTFTTLINGYCKAGRVDDGLELF 604

Query: 594 CNLGLIPDEMWRKLGLLSDETMTPVSLFDGFVPCERRAGNANHLL 638
           C +G        + G++++  +T ++L  GF    R+ GN N  L
Sbjct: 605 CEMG--------RRGIVAN-AITYITLICGF----RKVGNINGAL 636



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 92/400 (23%), Positives = 174/400 (43%), Gaps = 19/400 (4%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           +++  F D+ +++ MI V    +GR+     ++ E+          T+   +  + +   
Sbjct: 282 QEKGIFPDLFTYNSMI-VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV--LKETQ--LPNFLSFNI 190
           +    E +DEM   G  PNT   + ++D   K  R+D    +  L  T+   PN ++FN 
Sbjct: 341 FFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNT 400

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +   C    + +  +++  M   G   +   +  L++ F  +G +  A  LL  MI+ G
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQ-----------NGCSPNVVTYTSLIKG 299
               +     L+DG     +L  A  +++ M +           NG  P+V TY  LI G
Sbjct: 461 LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISG 520

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
            +    F  A    + +   G  PD + ++ +ID L K    D+A  ++D +      P+
Sbjct: 521 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPN 580

Query: 360 SYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYN 416
             TF +L++  C +GR     +L C +    + A+ + Y  L+  F K G  N A+ ++ 
Sbjct: 581 VVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQ 640

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            M+  G  PD  +   +L GL    ++  A+ + + + M+
Sbjct: 641 EMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMS 680


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 113/427 (26%), Positives = 194/427 (45%), Gaps = 26/427 (6%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDV 207
           PN    + ++D L K GR      +  E Q     P+  ++N  +   C     S+ + +
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
           +  M+ +   P+V  +  L+N F K G+  EA +L   M+  G   +   ++ +IDGF +
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
             RLD A +++  M   GCSPN++T+ +LI G+  AK        L  +   G   D   
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-------FSLLP 380
           +N LI     +G  + ALD+   ++   L PD  T  +LL  +C +G+       F ++ 
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492

Query: 381 KLVCGLE-------VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
           K    L+       VE D+  YN L+S     G   +A +LY  M  +G  PD  ++  +
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF----RRAI 489
           + GLC   ++DEA  ++  +   + + N    T +++   +AGR    ++LF    RR I
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI 612

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
           V     + ++Y   I G  + G    A  ++ +M    V P+  T R ML     +  +K
Sbjct: 613 VA----NAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELK 668

Query: 550 MVKRLLQ 556
               +L+
Sbjct: 669 RAVAMLE 675



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 114/457 (24%), Positives = 214/457 (46%), Gaps = 24/457 (5%)

Query: 136 GMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ-----LPNFLS 187
           G ++EA    D M   G  P       ++D + K G     + +L++ +     +PN + 
Sbjct: 198 GRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVI 257

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           ++  + +LCK    S+ +++   M  KG +P++  +  ++  FC  GR ++A QLL  M+
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
               S  V  +  LI+ F +  +   A  L+++M+  G  PN +TY+S+I GF +     
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLD 377

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A     ++ ++G +P+L+  N LID        DD +++   + E  LV D+ T+ +L+
Sbjct: 378 AAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437

Query: 368 STVCLSGRFS----LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM----- 418
               L G  +    LL +++    +  D+V  + LL   C  G    A++++  M     
Sbjct: 438 HGFYLVGDLNAALDLLQEMISS-GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496

Query: 419 -LD-----KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
            LD      G  PD  ++  L+ GL    K  EA  +Y+ +       +   +++++D L
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
            +  R  +A Q+F     + +  +VV++T  I G  + GR ++   L+ +M    +  NA
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA 616

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
            TY  ++  F K  NI     + Q++I + +  D  T
Sbjct: 617 ITYITLICGFRKVGNINGALDIFQEMISSGVYPDTIT 653



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 136/590 (23%), Positives = 253/590 (42%), Gaps = 105/590 (17%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP----NFLSFNIALC 193
            ++ F +M R    P+      +M V+ ++ R DL I + ++ +      +  SFNI + 
Sbjct: 63  AIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIK 122

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
             C  + +       G + + G +P+V  F  LL+  C   R++EA  L   M       
Sbjct: 123 CFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRP 182

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
           +V  +T L++G  R  R+  A  L ++M+++G  P  +TY +++ G  +      A + L
Sbjct: 183 NVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLL 242

Query: 314 DMLESEGH-APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
             +E   H  P++V ++ +ID L K G + DA +++  + E  + PD +T+ S++   C 
Sbjct: 243 RKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCS 302

Query: 373 SGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD--N 427
           SGR+S   +L+  +   ++  D+V YNAL++ F K G   +A +LY+ ML +G  P+   
Sbjct: 303 SGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTIT 362

Query: 428 YS---------------------------------FVGLLRGLCGARKIDEAINVYQ--- 451
           YS                                 F  L+ G CGA++ID+ + +     
Sbjct: 363 YSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT 422

Query: 452 --GIVMNNPAVNAHVH------------------------------TAIVDRLIEAGRCH 479
             G+V +    N  +H                                ++D L + G+  
Sbjct: 423 ETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLK 482

Query: 480 KAIQLF------RRAIVEKYPL-----DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAV 528
            A+++F      ++ +   +P      DV +Y + I GL+  G+  EA  LY +M H  +
Sbjct: 483 DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542

Query: 529 PPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVN 588
            P+  TY  M+   CK+  +    ++   +       +    +  T  I  +  +    +
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNV---VTFTTLINGYCKAGRVDD 599

Query: 589 QLVEMCNLGLIPDEMWRKLGLLSDETMTPVSLFDGFVPCERRAGNANHLL 638
            L   C +G        + G++++  +T ++L  GF    R+ GN N  L
Sbjct: 600 GLELFCEMG--------RRGIVAN-AITYITLICGF----RKVGNINGAL 636



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 92/400 (23%), Positives = 174/400 (43%), Gaps = 19/400 (4%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           +++  F D+ +++ MI V    +GR+     ++ E+          T+   +  + +   
Sbjct: 282 QEKGIFPDLFTYNSMI-VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV--LKETQ--LPNFLSFNI 190
           +    E +DEM   G  PNT   + ++D   K  R+D    +  L  T+   PN ++FN 
Sbjct: 341 FFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNT 400

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +   C    + +  +++  M   G   +   +  L++ F  +G +  A  LL  MI+ G
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQ-----------NGCSPNVVTYTSLIKG 299
               +     L+DG     +L  A  +++ M +           NG  P+V TY  LI G
Sbjct: 461 LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISG 520

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
            +    F  A    + +   G  PD + ++ +ID L K    D+A  ++D +      P+
Sbjct: 521 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPN 580

Query: 360 SYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYN 416
             TF +L++  C +GR     +L C +    + A+ + Y  L+  F K G  N A+ ++ 
Sbjct: 581 VVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQ 640

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            M+  G  PD  +   +L GL    ++  A+ + + + M+
Sbjct: 641 EMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMS 680



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 90/378 (23%), Positives = 158/378 (41%), Gaps = 46/378 (12%)

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           L  GF  ++ L+ A  L+  M+++   P+VV +  L+   +  +   +  S    +E + 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
              D+   N+LI C         AL  +  + +L L PD  TF +LL  +C+  R S   
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVS--- 166

Query: 381 KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
                                        +A+ L++ M +    P+  +F  L+ GLC  
Sbjct: 167 -----------------------------EALNLFHQMFETTCRPNVVTFTTLMNGLCRE 197

Query: 441 RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR-AIVEKYPLDVVS 499
            +I EA+ +   ++ +        +  IVD + + G    A+ L R+   V     +VV 
Sbjct: 198 GRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVI 257

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           Y+  I  L + GR  +A  L+++M+   + P+ +TY  M++ FC        ++LLQ+++
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317

Query: 560 DARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTPVS 619
           + +I  D  T   L     K      A     EM   G+IP+            T+T  S
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN------------TITYSS 365

Query: 620 LFDGFVPCERRAGNANHL 637
           + DGF   + R   A H+
Sbjct: 366 MIDGFCK-QNRLDAAEHM 382


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 113/427 (26%), Positives = 194/427 (45%), Gaps = 26/427 (6%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDV 207
           PN    + ++D L K GR      +  E Q     P+  ++N  +   C     S+ + +
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
           +  M+ +   P+V  +  L+N F K G+  EA +L   M+  G   +   ++ +IDGF +
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
             RLD A +++  M   GCSPN++T+ +LI G+  AK        L  +   G   D   
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-------FSLLP 380
           +N LI     +G  + ALD+   ++   L PD  T  +LL  +C +G+       F ++ 
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492

Query: 381 KLVCGLE-------VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
           K    L+       VE D+  YN L+S     G   +A +LY  M  +G  PD  ++  +
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF----RRAI 489
           + GLC   ++DEA  ++  +   + + N    T +++   +AGR    ++LF    RR I
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI 612

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
           V     + ++Y   I G  + G    A  ++ +M    V P+  T R ML     +  +K
Sbjct: 613 VA----NAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELK 668

Query: 550 MVKRLLQ 556
               +L+
Sbjct: 669 RAVAMLE 675



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 114/457 (24%), Positives = 214/457 (46%), Gaps = 24/457 (5%)

Query: 136 GMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ-----LPNFLS 187
           G ++EA    D M   G  P       ++D + K G     + +L++ +     +PN + 
Sbjct: 198 GRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVI 257

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           ++  + +LCK    S+ +++   M  KG +P++  +  ++  FC  GR ++A QLL  M+
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
               S  V  +  LI+ F +  +   A  L+++M+  G  PN +TY+S+I GF +     
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLD 377

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A     ++ ++G +P+L+  N LID        DD +++   + E  LV D+ T+ +L+
Sbjct: 378 AAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437

Query: 368 STVCLSGRFS----LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM----- 418
               L G  +    LL +++    +  D+V  + LL   C  G    A++++  M     
Sbjct: 438 HGFYLVGDLNAALDLLQEMISS-GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496

Query: 419 -LD-----KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
            LD      G  PD  ++  L+ GL    K  EA  +Y+ +       +   +++++D L
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
            +  R  +A Q+F     + +  +VV++T  I G  + GR ++   L+ +M    +  NA
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA 616

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
            TY  ++  F K  NI     + Q++I + +  D  T
Sbjct: 617 ITYITLICGFRKVGNINGALDIFQEMISSGVYPDTIT 653



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 134/645 (20%), Positives = 267/645 (41%), Gaps = 94/645 (14%)

Query: 53  VHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELAR 112
           +  TL     +     F     K +  FH+++  +  I + + +  R   +  +V     
Sbjct: 27  IRDTLAKASGESCEAGFGGESLKLQSGFHEIKGLEDAIDLFSDML-RSRPLPSVVDFCKL 85

Query: 113 VGCVIKAQTFLLFLRIYWRGE---------MYGMVLEAFDEMGRFGFTPNTFARNIVMDV 163
           +G V++ +   L + +Y + E          + ++++ F    +  F  +TF +      
Sbjct: 86  MGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGK------ 139

Query: 164 LFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMF 223
           L K+G              P+ ++FN  L  LC  + VS   ++   M      PNV  F
Sbjct: 140 LTKLGL------------HPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTF 187

Query: 224 EILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR----------LRRLDM 273
             L+N  C+ GRI EA  LL  M+  G   +   +  ++DG  +          LR+++ 
Sbjct: 188 TTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEE 247

Query: 274 AGY--------------------------LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
             +                          L+ +M + G  P++ TY S+I GF  +  +S
Sbjct: 248 VSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWS 307

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A   L  +     +PD+V +N LI+   K G + +A ++YD +L   ++P++ T+ S++
Sbjct: 308 DAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMI 367

Query: 368 STVCLSGRFSLLPK---LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
              C   R         L+       +L+ +N L+  +C A   +  ++L + M + G  
Sbjct: 368 DGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLV 427

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
            D  ++  L+ G      ++ A+++ Q ++ +    +      ++D L + G+   A+++
Sbjct: 428 ADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEM 487

Query: 485 F------RRAIVEKYPL-----DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
           F      ++ +   +P      DV +Y + I GL+  G+  EA  LY +M H  + P+  
Sbjct: 488 FKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTI 547

Query: 534 TYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEM 593
           TY  M+   CK+  +    ++   +       +    +  T  I  +  +    + L   
Sbjct: 548 TYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNV---VTFTTLINGYCKAGRVDDGLELF 604

Query: 594 CNLGLIPDEMWRKLGLLSDETMTPVSLFDGFVPCERRAGNANHLL 638
           C +G        + G++++  +T ++L  GF    R+ GN N  L
Sbjct: 605 CEMG--------RRGIVAN-AITYITLICGF----RKVGNINGAL 636



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 92/400 (23%), Positives = 174/400 (43%), Gaps = 19/400 (4%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           +++  F D+ +++ MI V    +GR+     ++ E+          T+   +  + +   
Sbjct: 282 QEKGIFPDLFTYNSMI-VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV--LKETQ--LPNFLSFNI 190
           +    E +DEM   G  PNT   + ++D   K  R+D    +  L  T+   PN ++FN 
Sbjct: 341 FFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNT 400

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +   C    + +  +++  M   G   +   +  L++ F  +G +  A  LL  MI+ G
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQ-----------NGCSPNVVTYTSLIKG 299
               +     L+DG     +L  A  +++ M +           NG  P+V TY  LI G
Sbjct: 461 LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISG 520

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
            +    F  A    + +   G  PD + ++ +ID L K    D+A  ++D +      P+
Sbjct: 521 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPN 580

Query: 360 SYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYN 416
             TF +L++  C +GR     +L C +    + A+ + Y  L+  F K G  N A+ ++ 
Sbjct: 581 VVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQ 640

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            M+  G  PD  +   +L GL    ++  A+ + + + M+
Sbjct: 641 EMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMS 680


>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
          Length = 818

 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 121/533 (22%), Positives = 227/533 (42%), Gaps = 14/533 (2%)

Query: 79  YFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMV 138
           +  D  +F+ +I  +  + GR      +  ++   GC     T+ + L    +   Y   
Sbjct: 247 FPPDTFTFNPLIRALC-VRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQA 305

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCN 194
           +   DEM   G  P+    N++++ +   G VD  + +L         P+ +++   L +
Sbjct: 306 MALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKS 365

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           LC       V++++  M      P+   F  ++   C+ G +  A +++  M   G    
Sbjct: 366 LCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVAD 425

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           +  ++ ++DG   + R+D A  L  ++   GC P+ + YT+++KG    + +  A   + 
Sbjct: 426 IVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMA 485

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF-C---SLLSTV 370
            +      PD V  N ++  L + G  D A+ V + + E    PD  T+ C    L +  
Sbjct: 486 EMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNES 545

Query: 371 CLSGRFSLLPKL-VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
           C+     LL  L  CG   + D+V +N LL   C       A +L   M+     PD  +
Sbjct: 546 CIDDAMELLSDLQSCG--CKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELT 603

Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
           F  ++  LC    + +AI   + +  N    N+  ++ +VD L++AG+   A++L    +
Sbjct: 604 FNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELL-SGM 662

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
               P D+++Y   I  L + G+ EEA  L   M    + P+  TYR +    C+E    
Sbjct: 663 TNGTP-DLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTD 721

Query: 550 MVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
              R+L+ V D  +  D      +     +   +  A++    M + G +PDE
Sbjct: 722 RAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDE 774



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/414 (24%), Positives = 179/414 (43%), Gaps = 4/414 (0%)

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP-NFLSFNIALCN 194
           G V +A       G +      N +++   + GR++   +++     P +  +FN  +  
Sbjct: 201 GRVSDAERVFAALGPSATVVTYNTMVNGYCRAGRIEDARRLINGMPFPPDTFTFNPLIRA 260

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           LC    + +   V   M+ +G  P+V  + ILL+  CK     +A  LL  M   G    
Sbjct: 261 LCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPD 320

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           +  + VLI+       +D A  +   +  +GC P+ VTYT ++K    ++ +      L 
Sbjct: 321 IVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLA 380

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            + S   APD V  N ++  L + G  D A++V D + E   V D  T+ S+L  +C  G
Sbjct: 381 EMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVG 440

Query: 375 RFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
           R     +L+  L+    + D + Y  +L   C      +A +L   ML     PD  +F 
Sbjct: 441 RVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFN 500

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            ++  LC    +D AI V + +  N  + +   +  I+D L        A++L       
Sbjct: 501 TVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSC 560

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
               D+V++   ++GL    R E+A  L + M     PP+  T+  ++ S C++
Sbjct: 561 GCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQK 614



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 107/237 (45%), Gaps = 5/237 (2%)

Query: 335 LSKMGSYDDALDVYDGLLEL--KLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADL 392
           L + G  D+AL ++D +     +  P       L+  +C  GR S   ++   L   A +
Sbjct: 160 LVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAALGPSATV 219

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           V YN +++ +C+AG    A +L N M    F PD ++F  L+R LC   +I +A+ V+  
Sbjct: 220 VTYNTMVNGYCRAGRIEDARRLINGM---PFPPDTFTFNPLIRALCVRGRIPDALAVFDD 276

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           ++    + +   ++ ++D   +     +A+ L      +    D+V+Y V I  +   G 
Sbjct: 277 MLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGD 336

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
            +EA  + S +      P+A TY  +L S C     K V+ LL ++       D  T
Sbjct: 337 VDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVT 393



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 94/224 (41%), Gaps = 2/224 (0%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           R+E    ++  + R  C     TF   +    +  +    +E    M   G  PN+   +
Sbjct: 581 RWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYS 640

Query: 159 IVMDVLFKIGRVDLGIKVLK--ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
           IV+D L K G+    +++L       P+ +++N  + NL K   +    D++ +MV  G 
Sbjct: 641 IVVDALLKAGKAQAALELLSGMTNGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGL 700

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
            P+   +  L    C+      A ++L  +   G S     +  ++ GF R RR D+A  
Sbjct: 701 CPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAID 760

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
            +  MV +GC P+  TY  L++      +   A   L  L S G
Sbjct: 761 CFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASLCSLG 804


>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
 gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
          Length = 836

 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 124/497 (24%), Positives = 221/497 (44%), Gaps = 62/497 (12%)

Query: 178 KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIA 237
           K+   P+  +    L +L K N++    +V   +   G  P+V +F  ++N FCK  R  
Sbjct: 214 KKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHRED 273

Query: 238 EAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLI 297
           +A  L   M  LG + +V  +  +I G  +  RLD A    EKMV+   SP+++TY+  I
Sbjct: 274 DAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFI 333

Query: 298 KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
            G ++ +    A   L  +   G  P+ V +N LID   KMG+  +AL + D +L   + 
Sbjct: 334 NGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGIS 393

Query: 358 PDSYTFCSLLSTVCLS----------------------GRFSLLPKLVC-------GLEV 388
           P+S T  SL+   C S                      G FS++   +C        L  
Sbjct: 394 PNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHF 453

Query: 389 EADLVVYN---------ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
             ++++ N          L+S  CKAG   +AV+L+  +L KGF P+  +   L+ GLC 
Sbjct: 454 IREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCK 513

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
           A  + E + + + ++      +   +  ++    + G+  +  +L    + +    D+ +
Sbjct: 514 AGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYT 573

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           + + + GL    + +EA  L+ + K     PN YTY VM+  +CK   ++  + LL +++
Sbjct: 574 FNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELV 633

Query: 560 DARIELD---YHTSIRL------TKFIFKFHSSSSAVNQLVE----------MCNLGLIP 600
             ++EL+   Y++ IR           F+      +   L+           +CN+GL+ 
Sbjct: 634 SKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVD 693

Query: 601 D-----EMWRKLGLLSD 612
           D     +  RK GLL +
Sbjct: 694 DAKHLLDEMRKEGLLPN 710



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 139/588 (23%), Positives = 244/588 (41%), Gaps = 91/588 (15%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG 173
           G +     F   +  + +G      +  F +M + G  PN    N ++  L K GR+D  
Sbjct: 251 GIIPDVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEA 310

Query: 174 I----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
                K++KE   P+ +++++ +  L KL  +     V+  M   GF PN  ++  L++ 
Sbjct: 311 YRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDG 370

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCS-- 287
           +CKMG I+EA ++   M++ G S +      LI GF +  ++  A  + E+M+  G    
Sbjct: 371 YCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPIN 430

Query: 288 ---------------------------------PNVVTYTSLIKGFMEAKMFSIAFSFLD 314
                                            PN    T+L+ G  +A     A     
Sbjct: 431 QGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWC 490

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            L  +G  P++V  N LI  L K G+  + L +   +LE  LV D  T+ +L+S  C  G
Sbjct: 491 RLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEG 550

Query: 375 R----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           +    F L  ++V    ++ D+  +N LL   C A   ++A +L++     G+ P+ Y++
Sbjct: 551 KVKEGFELKEEMV-KKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTY 609

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF----R 486
             ++ G C A K++E  N+   +V     +N+ V+ +++      G  + A +L      
Sbjct: 610 GVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKS 669

Query: 487 RAIV---------------------EKYPLD----------VVSYTVAIRGLLEGGRTEE 515
           R ++                      K+ LD          VV YT  I G  + G+  +
Sbjct: 670 RGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNK 729

Query: 516 AYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTK 575
             I+  +M    + PN +TY +M+  FCK    K   +LL ++ +  I  D  T    T 
Sbjct: 730 VNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTN 789

Query: 576 FIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTPVSLFDG 623
            + K       V +  ++C      DEM    G +  + +T  +L DG
Sbjct: 790 GLCK----EGKVEEAFKVC------DEMSS--GAVCLDEITYTTLIDG 825



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 119/509 (23%), Positives = 213/509 (41%), Gaps = 42/509 (8%)

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNI 190
           +G   + F  + + G  P+      ++  L K   +    +V     L    P+   F+ 
Sbjct: 202 FGFAADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFST 261

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +   CK +   +   +   M + G  PNV  +  +++  CK GR+ EAY+    M+   
Sbjct: 262 MINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEK 321

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
            S S+  ++V I+G  +L ++D A  + ++M + G  PN V Y +LI G+ +    S A 
Sbjct: 322 VSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEAL 381

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
              D + S+G +P+ V  N LI    K      A +V + ++   L  +  +F  +++ +
Sbjct: 382 KIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWL 441

Query: 371 CLSGRF-------------------SLLPKLVCGL-----EVEA--------------DL 392
           CL  RF                    LL  LV GL     + EA              ++
Sbjct: 442 CLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNI 501

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           V  NAL+   CKAG   + +KL   ML++G   D  ++  L+ G C   K+ E   + + 
Sbjct: 502 VTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEE 561

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           +V      + +    ++  L  A +  +A +L+       Y  +V +Y V I G  +  +
Sbjct: 562 MVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANK 621

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
            EE   L +++    +  N+  Y  ++ ++C   N+    RL  D+    + L   T   
Sbjct: 622 VEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSS 681

Query: 573 LTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           L   +        A + L EM   GL+P+
Sbjct: 682 LMHGLCNIGLVDDAKHLLDEMRKEGLLPN 710



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 116/500 (23%), Positives = 220/500 (44%), Gaps = 14/500 (2%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           + +    ++ E++ +G V     +   +  Y +       L+  D+M   G +PN+   N
Sbjct: 341 KIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLN 400

Query: 159 IVMDVLFKIGRVDLGIKVLKET---QLP-NFLSFNIALCNLC-KLNDVSNVKDVIGMMVR 213
            ++    K  ++     VL+E     LP N  SF++ +  LC K   V+ +  +  M++R
Sbjct: 401 SLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLR 460

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
               PN  +   L++  CK G+  EA +L   ++  G   ++     LI G  +   +  
Sbjct: 461 -NLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQE 519

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
              L   M++ G   + +TY +LI G  +       F   + +  +G  PD+   N+L+ 
Sbjct: 520 TLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLH 579

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF----SLLPKLVCGLEVE 389
            L      D+A  ++    +   VP+ YT+  ++   C + +     +LL +LV   ++E
Sbjct: 580 GLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELV-SKKLE 638

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            + VVYN+L+  +C  G  N A +L + M  +G      ++  L+ GLC    +D+A ++
Sbjct: 639 LNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHL 698

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
              +       N   +T I+    + G+ +K   + +         +  +YT+ I G  +
Sbjct: 699 LDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCK 758

Query: 510 GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
            G+T+EA  L ++M    + P+A TY       CKE  ++   ++  ++    + LD   
Sbjct: 759 LGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLD--- 815

Query: 570 SIRLTKFIFKFHSSSSAVNQ 589
            I  T  I   H  S+A NQ
Sbjct: 816 EITYTTLIDGCHQPSTATNQ 835



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 102/245 (41%), Gaps = 6/245 (2%)

Query: 60  CPSDLIALSFFIWC-AKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIK 118
           C +D I  +  +W   K+  Y  +V ++  MI    +   + E    ++ EL      + 
Sbjct: 582 CNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCK-ANKVEEGENLLNELVSKKLELN 640

Query: 119 AQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL- 177
           +  +   +R Y             D+M   G   +    + +M  L  IG VD    +L 
Sbjct: 641 SVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLD 700

Query: 178 ---KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
              KE  LPN + +   +    KL  ++ V  V+  M     +PN   + I+++ FCK+G
Sbjct: 701 EMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLG 760

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
           +  EA +LL  M   G       +    +G  +  +++ A  + ++M       + +TYT
Sbjct: 761 KTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYT 820

Query: 295 SLIKG 299
           +LI G
Sbjct: 821 TLIDG 825


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 120/471 (25%), Positives = 215/471 (45%), Gaps = 38/471 (8%)

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           +V  + + GC    QT+   +    R     + +  + +M + G  PNT   N +++ L 
Sbjct: 325 LVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELC 384

Query: 166 KIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
             GR    +K+         L N  ++N  +  LC   D+     +   M++ G  P V 
Sbjct: 385 VGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVV 444

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            +  L+N +   G +  A +LL LM   G       +  L+ GF +  +L+ A + +++M
Sbjct: 445 TYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEM 504

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
           V+ G +PN V+YT+LI G  +     IA S L  +E  G  P++  +N +I+ LSK   +
Sbjct: 505 VECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRF 564

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL-------------LPK------L 382
            +A  + D ++E  L+P+  T+ +L+  +C +GR                LP       L
Sbjct: 565 SEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSL 624

Query: 383 VCGL--EVEAD-------------LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           + GL  E +AD             L  Y+ L+S  C+ G   +A +L   M ++GF PD 
Sbjct: 625 IYGLCQEGKADEAERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDR 684

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
             +  LL   C   ++D A+ ++  I      ++  ++ A++  L +AG+  +A  LF  
Sbjct: 685 EIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDN 744

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            + +++  D + +TV + GLL+ G  +    L   M+     PN  TY ++
Sbjct: 745 MLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVIL 795



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 133/591 (22%), Positives = 253/591 (42%), Gaps = 70/591 (11%)

Query: 45  PIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSF----------------DH 88
           P + A H+     ++  ++ + + FF W +K+  Y H++  F                DH
Sbjct: 71  PQLKAHHVAEIVAVHKDTESV-IQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADH 129

Query: 89  MISVVTRLTGRFETVRGI---VGELARVG---CVIKAQTFLLFLRIYWRGEMYGMVLEAF 142
           +  ++ +     E +R +   + E++ +G    +    T L+ L  +   EM       +
Sbjct: 130 IRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKF---EMVEGARNLY 186

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRV-------------DLGIKVLKETQL------- 182
            +M   G  P+    N ++++L K G+V             DL   V   T L       
Sbjct: 187 KQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRN 246

Query: 183 -------------------PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMF 223
                              PN ++++  +  LC    V    D++  M+ KG  P V  +
Sbjct: 247 RNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTY 306

Query: 224 EILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQ 283
            + +   C +    EA +L+  M   G   +V  +T LI G  RL +L++A  L+ KM++
Sbjct: 307 TLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLK 366

Query: 284 NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
            G  PN VTY +LI        FS A      +E  G   +   +N +I  L   G  + 
Sbjct: 367 EGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEK 426

Query: 344 ALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLS 400
           A+ +++ +L++  +P   T+ +L++     G  +   +L+  ++    E D   YN L+S
Sbjct: 427 AMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVS 486

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
            F K G    A   +  M++ G  P+  S+  L+ G     K+D A+++ + +       
Sbjct: 487 GFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNP 546

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
           N   + A+++ L +  R  +A ++  + + +    +V++YT  I GL   GRT+ A+ ++
Sbjct: 547 NVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIF 606

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSI 571
             M+     PN YTY  ++   C+E      +R+ +  I     LD ++++
Sbjct: 607 HDMEKRKCLPNLYTYSSLIYGLCQEGKADEAERMSE--IGCEPTLDTYSTL 655



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 115/489 (23%), Positives = 222/489 (45%), Gaps = 41/489 (8%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           K+R    +VQ++  +IS ++RL G+ E   G+  ++ + G V    T+   +     G  
Sbjct: 330 KKRGCRPNVQTYTALISGLSRL-GKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGR 388

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNI 190
           +   L+ F  M   G   NT   N ++  L   G ++  +    K+LK   LP  +++N 
Sbjct: 389 FSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNT 448

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +       +V+N   ++ +M   G  P+   +  L++ F K G++  A      M+  G
Sbjct: 449 LINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECG 508

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
            + +  ++T LIDG  +  ++D+A  L ++M + GC+PNV +Y ++I G  +   FS A 
Sbjct: 509 LNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAE 568

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
              D +  +G  P+++ +  LID L + G    A  ++  + + K +P+ YT+ SL+  +
Sbjct: 569 KICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGL 628

Query: 371 CLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN--- 427
           C  G+     ++   +  E  L  Y+ L+S  C+ G   +A +L   M ++GF PD    
Sbjct: 629 CQEGKADEAERM-SEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIY 687

Query: 428 YSFV--------------------------------GLLRGLCGARKIDEAINVYQGIVM 455
           YS +                                 L+  LC A +++EA  ++  ++ 
Sbjct: 688 YSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLE 747

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
                +  V T +VD L++ G     ++L      + +  ++ +Y +  R L   G++ E
Sbjct: 748 KEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIE 807

Query: 516 AYILYSQMK 524
           +  L  ++K
Sbjct: 808 SEPLADKLK 816



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 105/431 (24%), Positives = 198/431 (45%), Gaps = 15/431 (3%)

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLND 200
           M + G  PN      ++  L ++G++++ I    K+LKE  +PN +++N  +  LC    
Sbjct: 329 MKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGR 388

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
            S    +   M   G   N + +  ++   C  G I +A  L   M+ +G   +V  +  
Sbjct: 389 FSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNT 448

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME-AKMFSIAFSFLDMLESE 319
           LI+G+     ++ A  L + M +NGC P+  TY  L+ GF +  K+ S +F F +M+E  
Sbjct: 449 LINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVEC- 507

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
           G  P+ V +  LID  SK G  D AL +   + E+   P+  ++ ++++ +    RFS  
Sbjct: 508 GLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEA 567

Query: 380 PKLVCGLEVEADL----VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
            K +C   VE  L    + Y  L+   C+ G    A K+++ M  +   P+ Y++  L+ 
Sbjct: 568 EK-ICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIY 626

Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
           GLC   K DEA  + +  +   P ++   ++ +V  L   GR ++A QL +      +  
Sbjct: 627 GLCQEGKADEAERMSE--IGCEPTLD--TYSTLVSGLCRKGRFYEAEQLVKDMKERGFCP 682

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
           D   Y   +    +    + A  ++  ++      +   YR ++ + CK   ++  + L 
Sbjct: 683 DREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALF 742

Query: 556 QDVIDARIELD 566
            ++++     D
Sbjct: 743 DNMLEKEWNAD 753



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 96/415 (23%), Positives = 161/415 (38%), Gaps = 67/415 (16%)

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           S N  L  L K   V   +++   M+  G  P++  F  L+N   K G++ EA  +L   
Sbjct: 165 SCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILS-- 222

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
                                            ++ Q   SP+V TYTSLI G    +  
Sbjct: 223 ---------------------------------QIFQYDLSPDVFTYTSLILGHCRNRNL 249

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
            +AF   D +  EG  P+ V ++ LI+ L   G  D+ALD+ + ++E  + P  YT+   
Sbjct: 250 DLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLP 309

Query: 367 LSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
           ++ +C         +LV                                  M  +G  P+
Sbjct: 310 ITALCAIEHEEEAIELVA--------------------------------RMKKRGCRPN 337

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
             ++  L+ GL    K++ AI +Y  ++      N   + A+++ L   GR   A+++F 
Sbjct: 338 VQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFH 397

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
                    +  +Y   I+GL  GG  E+A +L+ +M  +   P   TY  ++  +  + 
Sbjct: 398 WMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKG 457

Query: 547 NIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           N+    RLL  + +   E D  T   L     K+    SA     EM   GL P+
Sbjct: 458 NVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPN 512



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 51/279 (18%), Positives = 127/279 (45%), Gaps = 4/279 (1%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           +V+S++ +I+ +++   RF     I  ++   G +    T+   +    R        + 
Sbjct: 547 NVESYNAVINGLSK-ENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKI 605

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDV 201
           F +M +    PN +  + ++  L + G+ D   ++ +    P   +++  +  LC+    
Sbjct: 606 FHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAERMSEIGCEPTLDTYSTLVSGLCRKGRF 665

Query: 202 SNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVL 261
              + ++  M  +GF P+  ++  LL   CK   +  A ++   +   G  L ++ +  L
Sbjct: 666 YEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRAL 725

Query: 262 IDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH 321
           I    +  +++ A  L++ M++   + + + +T L+ G ++     +    L ++ES+  
Sbjct: 726 ICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNF 785

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
            P++  + +L   LS++G   ++  + D   +LK++ DS
Sbjct: 786 TPNIQTYVILGRELSRIGKSIESEPLAD---KLKVLKDS 821


>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 122/474 (25%), Positives = 215/474 (45%), Gaps = 12/474 (2%)

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNI 190
           + M+   +  M + G  PN F  NI++  L K  RVD   K+L E       P+ +S+  
Sbjct: 162 FQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTT 221

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            + +LCKL  V   +++        F P+V ++  L+N  CK     EA+QLL  M+  G
Sbjct: 222 LISSLCKLGKVKEAREL-----AMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKG 276

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
              +V ++T +I+       ++++  +  KM   GCSPN+ T+TSLIKGF        A 
Sbjct: 277 IDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEAL 336

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
            F D +  EG  P++V +N L+  L    S  DA+ V++ +      P+  T+ +L+   
Sbjct: 337 DFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGY 396

Query: 371 CLSGRF---SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
             +G     S +   +       ++V Y  ++   C+    NQA  L   M  +   P+ 
Sbjct: 397 AKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNT 456

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
            +F   ++GLCG+ ++D AI V+  +  +    N   +  ++D L++  R  +A  L + 
Sbjct: 457 VTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKD 516

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN 547
                  L++V+Y   I G    G   EA  L  +M      P+A T  +++ ++CK+  
Sbjct: 517 MEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGK 576

Query: 548 IKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           + +  +L+  +   +   D      L   I        A+  L  M + G+ P+
Sbjct: 577 VNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPN 630



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 122/506 (24%), Positives = 213/506 (42%), Gaps = 42/506 (8%)

Query: 65  IALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLL 124
           +AL +F   A  + + H   ++  MI  +       + V+ ++ ++   G       F+ 
Sbjct: 58  LALEYFKSIANSKSFKHTPLTYQMMIEKLAS-EREMDCVQYLLQQMKLEGISCSEDLFIS 116

Query: 125 FLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KET 180
            +  Y R       L+ F  M  F   P     N ++D L    R  +   +     K+ 
Sbjct: 117 VIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDG 176

Query: 181 QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAY 240
             PN  ++NI L  LCK N V     ++  M  KG  P+   +  L++  CK+G++ EA 
Sbjct: 177 MEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAR 236

Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
           +L      +  + SV  +  LI+G  +    + A  L ++M+  G  PNV++YT++I   
Sbjct: 237 EL-----AMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINAL 291

Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
            +A    ++ + L  + + G +P+L     LI      G   +ALD +D ++   +VP+ 
Sbjct: 292 SDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPN- 350

Query: 361 YTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
                                          +V YNAL+   C       AV ++N M  
Sbjct: 351 -------------------------------VVAYNALMHGLCSKRSLGDAVSVFNQMEI 379

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
            G  P+  ++  L+ G   A  +D A  V+  ++ +    N   +T +VD L      ++
Sbjct: 380 NGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQ 439

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
           A  L     VE  P + V++   I+GL   GR + A  ++ QM +    PN  TY  +L 
Sbjct: 440 AYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLD 499

Query: 541 SFCKERNIKMVKRLLQDVIDARIELD 566
           S  K+R       L++D+    IEL+
Sbjct: 500 SLLKDRRFGEAFGLVKDMEHRGIELN 525



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 178/410 (43%), Gaps = 45/410 (10%)

Query: 140 EAF---DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIAL 192
           EAF   DEM   G  PN  +   +++ L   G V+L + VL +       PN  +F   +
Sbjct: 264 EAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLI 323

Query: 193 CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
                        D    M+R+G  PNV  +  L++  C    + +A  +   M   G  
Sbjct: 324 KGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCC 383

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
            +V  ++ LIDG+ +   LD A  +W  M+ +GC PNVV YT ++       MF+ A+  
Sbjct: 384 PNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCL 443

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
           ++ ++ E   P+ V  N  I  L   G  D A+ V+D +      P++ T+  LL ++  
Sbjct: 444 IENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLK 503

Query: 373 SGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
             RF     LV  +E   +E +LV YN ++  +C AG   +A++L   M+ +G  PD   
Sbjct: 504 DRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPD--- 560

Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
                           AI V                  ++D   + G+ + AIQL  R  
Sbjct: 561 ----------------AITV----------------NIVIDAYCKQGKVNIAIQLMDRLS 588

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
             K+  D+++YT  I G+      EEA +   +M    + PN  T+ V++
Sbjct: 589 AGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLV 638



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 101/231 (43%), Gaps = 5/231 (2%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG 173
           GC      +   + +  R  M+       + M      PNT   N  +  L   GRVD  
Sbjct: 416 GCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWA 475

Query: 174 IKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
           IKV  +       PN  ++N  L +L K         ++  M  +G   N+  +  ++  
Sbjct: 476 IKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYG 535

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
           +C  G + EA +LLG M+  GT        ++ID + +  ++++A  L +++      P+
Sbjct: 536 YCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPD 595

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL-SKMG 339
           ++ YTSLI G         A  +L  + SEG +P++   NVL+  L S MG
Sbjct: 596 IIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMG 646



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/237 (24%), Positives = 103/237 (43%), Gaps = 5/237 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           +V ++  M+ V+ R    F     ++  +    C     TF  F++           ++ 
Sbjct: 420 NVVAYTCMVDVLCR-NSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKV 478

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP----NFLSFNIALCNLCK 197
           FD+MG  G  PNT   N ++D L K  R      ++K+ +      N +++N  +   C 
Sbjct: 479 FDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCC 538

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              +    +++G MV +G  P+     I+++ +CK G++  A QL+  +        + A
Sbjct: 539 AGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIA 598

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           +T LI G      ++ A     +M+  G SPNV T+  L++        S A  FLD
Sbjct: 599 YTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLD 655


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 208/421 (49%), Gaps = 7/421 (1%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFL 186
           R + Y  V+    +M   G + +  +  I+++   ++  VD G     K++K    PN +
Sbjct: 103 RMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVI 162

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           +F+  +   C    +    ++  +MV +G+ PNV  + I++   C++G+  E  +LL  M
Sbjct: 163 TFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHM 222

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
             +G    V  +  ++D   + R ++ A +++ KM   G  P VVTYTSLI G      +
Sbjct: 223 KVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRW 282

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
             AF  L+ ++     PDLV  +VLID + K G   +A  +   + E+ + PD  T+ +L
Sbjct: 283 KEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTL 342

Query: 367 LSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           ++  CL        K+   +  +    D+  ++ L++ +CKA   ++A +L++ M  +G 
Sbjct: 343 MNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGL 402

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
            PD  S+  L+ GLC AR+  EA  +++ +  N    N   ++ ++D L + G   +A+ 
Sbjct: 403 IPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMG 462

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           LFR         D+V+Y + I G+ + G+ ++A  L++++    + PN +     +   C
Sbjct: 463 LFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVC 522

Query: 544 K 544
           K
Sbjct: 523 K 523



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 102/415 (24%), Positives = 190/415 (45%), Gaps = 38/415 (9%)

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
           LP+ + F      L ++     V  +   M   G   +V    IL+NCFC++  +   + 
Sbjct: 88  LPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFS 147

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           +LG +I LG   +V  ++ LI+GF    ++  A  L++ MV  G  PNV +Y+ +IKG  
Sbjct: 148 VLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLC 207

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK------------------------ 337
                +     L+ ++  G  PD+V +N ++D L K                        
Sbjct: 208 RVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVV 267

Query: 338 -----------MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLV 383
                      +G + +A  + + +    ++PD   F  L+  +C  G  S   ++ K +
Sbjct: 268 TYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTM 327

Query: 384 CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
             + VE D+  YN L++ +C      +A K++  M+ KG  PD +SF  L+ G C A++I
Sbjct: 328 TEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRI 387

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           DEA  ++  +       +   +  ++  L +A R  +A +LF+      YP ++V+Y++ 
Sbjct: 388 DEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSIL 447

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           +  L + G  ++A  L+  M++  + P+  TY +M+   CK    K  + L  ++
Sbjct: 448 LDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAEL 502



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 86/356 (24%), Positives = 170/356 (47%), Gaps = 8/356 (2%)

Query: 77  RDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYG 136
           R Y  +V S+  +I  + R+    E ++ ++  +  VGC      +   +    +  +  
Sbjct: 190 RGYKPNVHSYSIIIKGLCRVGKTTEVIK-LLEHMKVVGCEPDVVIYNTIVDRLCKDRLVN 248

Query: 137 MVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIAL 192
             +  F +M   G  P       ++  L  +GR      +L E +    +P+ ++F++ +
Sbjct: 249 EAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLI 308

Query: 193 CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
             +CK  +VS  + ++  M   G  P+V  +  L+N +C    + EA ++  +MI+ G  
Sbjct: 309 DIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRM 368

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
             V ++++L++G+ + +R+D A  L+++M   G  P+ V+Y +LI G  +A+    A   
Sbjct: 369 PDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEEL 428

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
              + S G+ P+LV +++L+DCLSK G  D A+ ++  +    L PD  T+  ++  +C 
Sbjct: 429 FKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCK 488

Query: 373 SGRFSLLPKLVCGLEV---EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
            G+F    +L   L V   + +  V    +   CK G  ++A K +  M     +P
Sbjct: 489 YGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSP 544



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 101/414 (24%), Positives = 194/414 (46%), Gaps = 8/414 (1%)

Query: 81  HDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLE 140
           HDV S   +I+   RL    +    ++G++ ++G      TF   +  +      G  +E
Sbjct: 124 HDVLSLTILINCFCRLC-HVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIE 182

Query: 141 AFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLC 196
            FD M   G+ PN  + +I++  L ++G+    IK+L+  ++    P+ + +N  +  LC
Sbjct: 183 LFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLC 242

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
           K   V+    +   M   G  P V  +  L++    +GR  EA+ LL  M        + 
Sbjct: 243 KDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLV 302

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
           A++VLID   +   +  A  + + M + G  P+V TY +L+ G+        A    +++
Sbjct: 303 AFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVM 362

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
            S+G  PD+   ++L++   K    D+A  ++D +    L+PD+ ++ +L+S +C + R 
Sbjct: 363 ISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRP 422

Query: 377 SLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
               +L   +       +LV Y+ LL    K G+ +QA+ L+  M + G  PD  ++  +
Sbjct: 423 LEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIM 482

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
           + G+C   K  +A  ++  + +     N  V T  +D + + G   +A + FR+
Sbjct: 483 IDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQ 536



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 106/444 (23%), Positives = 185/444 (41%), Gaps = 44/444 (9%)

Query: 203 NVKDVIGM---MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
           N+ D +     MV     P++  F  L +   +M        L   M   G S  V + T
Sbjct: 71  NINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLT 130

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
           +LI+ F RL  +D    +  K+++ G  PNV+T+++LI GF        A    D++ + 
Sbjct: 131 ILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVAR 190

Query: 320 GHA-----------------------------------PDLVFHNVLIDCLSKMGSYDDA 344
           G+                                    PD+V +N ++D L K    ++A
Sbjct: 191 GYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEA 250

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNALLS 400
           + ++  +    ++P   T+ SL+  +   GR    F LL ++  G  +  DLV ++ L+ 
Sbjct: 251 VHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGG-NIMPDLVAFSVLID 309

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
             CK G  ++A  +  TM + G  PD  ++  L+ G C   ++ EA  V++ ++      
Sbjct: 310 IMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMP 369

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
           +    + +V+   +A R  +A QLF          D VSY   I GL +  R  EA  L+
Sbjct: 370 DVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELF 429

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKF 580
             M     PPN  TY ++L    K+  +     L + + ++ ++ D  T   +   + K+
Sbjct: 430 KDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKY 489

Query: 581 HSSSSAVNQLVEMCNLGLIPDEMW 604
                A     E+   GL P+  W
Sbjct: 490 GKFKDARELFAELSVKGLQPNN-W 512


>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
 gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 129/520 (24%), Positives = 234/520 (45%), Gaps = 55/520 (10%)

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
           + R+G      TF   +  Y +          FD M   G TP+    +I++D LFK GR
Sbjct: 298 VVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGR 357

Query: 170 VDLGIKVL-----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFE 224
           ++ G ++L     K  +L + + F+ A+    K+ D+  V  +   M+ +G  PNV    
Sbjct: 358 LEDGQRLLLVALDKGIKL-DVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCS 416

Query: 225 ILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN 284
           IL+  FC+ GRI EA  L   ++ LG   S+  ++ LI GF +   L    YL+E M++ 
Sbjct: 417 ILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKK 476

Query: 285 GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP--------------------- 323
            C P+ + Y+ LI G  +  +   A  F     + G +P                     
Sbjct: 477 RCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGA 536

Query: 324 --------------DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
                         D V + +LI   ++ G  D+AL ++  +L+    PD  T+C+L+  
Sbjct: 537 MKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDG 596

Query: 370 VCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
           +C   + S    +   +C   V  D+ +YN L++   + G    A+ L+  ++++G  PD
Sbjct: 597 LCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPD 656

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
            ++F  ++   C  +++D+A+ ++  +       NA   T ++D     GR   A+ +F 
Sbjct: 657 VFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFS 716

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI-LYSQMKHIAVPPNAYTYRVMLLSFCKE 545
           + + E    ++V+Y+  I G  +     E+ + LY++M    + PN  +Y +++   CK 
Sbjct: 717 KMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKR 776

Query: 546 RNIK---------MVKRLLQDVIDARIELDYHTSI-RLTK 575
             +K         + K LL DVI   I +  +  + RLT+
Sbjct: 777 GLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTE 816



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 204/414 (49%), Gaps = 11/414 (2%)

Query: 136 GMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSF 188
           G +LEA   F ++ + GF P+    + ++    K G +  G      ++K+   P+ + +
Sbjct: 426 GRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVY 485

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           ++ +  LCK   V +        V +G  PNV     LL+ FC++  I  A ++  LM  
Sbjct: 486 SVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGM 545

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
           L        +T+LI G  +  R+D A  L+ +M++    P+V+TY +LI G  + K  S 
Sbjct: 546 LNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSA 605

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
                D +     APD+  +NVLI+  S+ G  + AL ++  ++E    PD +TF +++ 
Sbjct: 606 GLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMIC 665

Query: 369 TVCLSGRFSLLPKLVCGLEVE---ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
             C   R     +L   +  E    + + +  L+  FC+ G  + A+ +++ ML++G  P
Sbjct: 666 CYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEP 725

Query: 426 DNYSFVGLLRGLCGARKIDEA-INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           +  ++  L+ G   ++ + E+ + +Y  ++ NN A N   ++ ++D L + G   +A   
Sbjct: 726 NLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCA 785

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
           FR A+ +    DV++YT+ IRG  + GR  EA +LY  M    + P+ +  R +
Sbjct: 786 FRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPDRFLERTL 839



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 133/594 (22%), Positives = 252/594 (42%), Gaps = 27/594 (4%)

Query: 28  IHQISSPKVCATTH---QDFPIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQ 84
           I  +S+P  CA  H   Q+     A  +    ++   +D   L  F      RD F D+ 
Sbjct: 109 ISPLSAPSFCALLHVLLQNQLFSRAACVFDKFIMQFGNDYDTLDAF------RDGFCDLD 162

Query: 85  SFDH------MISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMV 138
           S +H      +I    R  G F+    I   +   G  +      L L          ++
Sbjct: 163 STNHSVVYGFLIESYCR-KGMFDKSVDIFMHVCVKGIFVSPNVVYLLLGSLIDSHCVEVI 221

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCN---- 194
           ++ + E+              VM+     G V++G++  K      F   +I  CN    
Sbjct: 222 VDKYGELCSAMREQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGGF-GLDIITCNKILK 280

Query: 195 -LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
            +   ND+    D   M+VR G  PNV  F  L++ +CK G + +A+ L  +M   G + 
Sbjct: 281 GIWMQNDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTP 340

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
            +  +++LIDG  +  RL+    L    +  G   +VV ++S +  +++           
Sbjct: 341 DLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIY 400

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
             + +EG +P++V  ++LI    + G   +A  ++  +L+L   P   T+ +L++  C S
Sbjct: 401 KRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKS 460

Query: 374 GR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
           G     F L   ++     E D +VY+ L++  CK G    A++ +   +++G +P+ ++
Sbjct: 461 GNLRDGFYLYEDMI-KKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFT 519

Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
              LL   C  + I  A+ VY  + M N   +   +T ++    + GR  +A+ LF + +
Sbjct: 520 LNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQML 579

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
            + +  DV++Y   I GL +  ++     ++  M   AV P+   Y V++    +E +++
Sbjct: 580 KKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLE 639

Query: 550 MVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
               L   V++   + D  T   +      F     AV    +M +  L P+ +
Sbjct: 640 AALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAI 693



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 96/214 (44%), Gaps = 8/214 (3%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D+  ++ +I++ +R  G  E   G+   +   G      TF   +  Y   +     ++ 
Sbjct: 621 DIAIYNVLINMHSR-EGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQL 679

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCK 197
           F +M      PN     I++D   + GR+D  +    K+L+E   PN ++++  +    K
Sbjct: 680 FAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFK 739

Query: 198 LNDV--SNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
              +  S +K +   M+     PN+  + IL++  CK G + EA       +       V
Sbjct: 740 SQSMMESGLK-LYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDV 798

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
            A+T+LI G+ ++ RL  A  L++ M+ N  +P+
Sbjct: 799 IAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPD 832


>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
          Length = 1048

 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 102/364 (28%), Positives = 187/364 (51%), Gaps = 3/364 (0%)

Query: 184 NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
           +  SF I +   C+ + +S    V+G M++ G+ P++  F  LL+ FC + RI +A+ L+
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
            LM+  G   +V  +  LIDG  +   L++A  L  +M + G   +VVTY +L+ G   +
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
             +S A   L  +      PD+V    LID   K G+ D+A ++Y  +++  + P++ T+
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284

Query: 364 CSLLSTVCLSGRFSLLPK---LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
            S+++ +C+ GR     K   L+       ++V YN L+S FCK    ++ +KL+  M  
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
           +GF  D +++  L+ G C   K+  A++++  +V      +   H  ++  L   G    
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIES 404

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
           A+  F      +  + +V+Y + I GL +  + E+A+ L+ ++    V P+A TY +M+L
Sbjct: 405 ALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMIL 464

Query: 541 SFCK 544
             CK
Sbjct: 465 GLCK 468



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 104/413 (25%), Positives = 200/413 (48%), Gaps = 19/413 (4%)

Query: 160  VMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG 215
            V+ V+ K+ + D+ I +  + +      +  SF I +   C+ + +S    ++G M++ G
Sbjct: 610  VLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLG 669

Query: 216  FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAG 275
            F P++     LLN FC+  R  EA  L+  M   G   +V  +  +I+G  + R L+ A 
Sbjct: 670  FRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNAL 729

Query: 276  YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
             ++  M + G   + VTY +LI G   +  ++ A   L  +      P+++F   LID  
Sbjct: 730  EVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTF 789

Query: 336  SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG-------RFSLLPKLVCGLEV 388
             K G+  +A ++Y  ++   +VP+ +T+ SL++  C+ G        F L+    C    
Sbjct: 790  VKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCF--- 846

Query: 389  EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
              D+V YN L++ FCK+      +KL+  M  +G   D +++  L+ G C A K++ A  
Sbjct: 847  -PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQK 905

Query: 449  VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
            V+  +V    + +   +  ++D L   G+  KA+ +       +  +D+++Y + I+GL 
Sbjct: 906  VFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLC 965

Query: 509  EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE----RNIKMVKRLLQD 557
               + +EA+ L+  +    V P+A  Y  M+   C++       K+ +R+ +D
Sbjct: 966  RTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKED 1018



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 121/459 (26%), Positives = 207/459 (45%), Gaps = 25/459 (5%)

Query: 50  PHIVHST-LLNCPSDLIALSFFIWCAKQRDYF---HDVQSFDHMISVVTRLTGRFETVRG 105
           P IV  T LL   ++L      I+ +++ + +   HD+ SF  +I    R + R      
Sbjct: 69  PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCS-RLSFALS 127

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           ++G++ ++G      TF   L  +      G        M + G+ PN    N ++D L 
Sbjct: 128 VLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLC 187

Query: 166 KIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
           K G +++ +++L E +      + +++N  L  LC     S+   ++  M+++   P+V 
Sbjct: 188 KNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVV 247

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            F  L++ F K G + EA +L   MI      +   +  +I+G     RL  A   ++ M
Sbjct: 248 TFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLM 307

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
              GC PNVVTY +LI GF + +M          +  EG   D+  +N LI    ++G  
Sbjct: 308 ASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKL 367

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF-SLLPKLVCGLEVEA--DLVVYNAL 398
             ALD++  ++  ++ PD  T C LL  +C++G   S L K     E E    +V YN +
Sbjct: 368 RVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIM 427

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG---ARKIDEAIN--VYQGI 453
           +   CKA    +A +L+  +  +G  PD  ++  ++ GLC     R+ DE I     +GI
Sbjct: 428 IHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           +    A + H+         E    +K I L  R I E+
Sbjct: 488 ICQMNAEDDHLE--------EHSSSNKEISLSLREIWER 518



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 110/460 (23%), Positives = 198/460 (43%), Gaps = 43/460 (9%)

Query: 83   VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF 142
            +  F  +++V+ ++  +F+ V  +  ++  +G      +F + +  + R     + L   
Sbjct: 604  IVDFTRVLTVIAKMN-KFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALL 662

Query: 143  DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKL 198
             +M + GF P+      +++   +  R    + ++        +PN + +N  +  LCK 
Sbjct: 663  GKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKN 722

Query: 199  NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
             D++N  +V   M +KG   +   +  L++     GR  +A +LL  M+      +V  +
Sbjct: 723  RDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFF 782

Query: 259  TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
            T LID F +   L  A  L+++M++    PNV TY SLI GF                  
Sbjct: 783  TALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF------------------ 824

Query: 319  EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL 378
                           C+   G   DA  ++D ++     PD  T+ +L++  C S R   
Sbjct: 825  ---------------CIH--GCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVED 867

Query: 379  LPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
              KL C +  +    D   YN L+  +C+AG  N A K++N M+D G +PD  ++  LL 
Sbjct: 868  GMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLD 927

Query: 436  GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
             LC   KI++A+ + + +  +   V+   +  I+  L    +  +A  LFR    +    
Sbjct: 928  CLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKP 987

Query: 496  DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
            D ++Y   I GL   G   EA  L  +MK     P+   Y
Sbjct: 988  DAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY 1027



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 98/424 (23%), Positives = 197/424 (46%), Gaps = 12/424 (2%)

Query: 218  PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
            P++  F  +L    KM +      L   M  LG S  + ++T+LI  F R  RL +A  L
Sbjct: 602  PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 661

Query: 278  WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
              KM++ G  P++VT  SL+ GF +   F  A S +D ++  G  P++V +N +I+ L K
Sbjct: 662  LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 721

Query: 338  MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVV 394
                ++AL+V+  + +  +  D+ T+ +L+S +  SGR++   +L+  +   +++ +++ 
Sbjct: 722  NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 781

Query: 395  YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
            + AL+  F K G   +A  LY  M+ +   P+ +++  L+ G C    + +A  ++  +V
Sbjct: 782  FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 841

Query: 455  MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
                  +   +  ++    ++ R    ++LF     +    D  +Y   I G  + G+  
Sbjct: 842  SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLN 901

Query: 515  EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLT 574
             A  ++++M    V P+  TY ++L   C    I+    +++D+  + +++D  T   + 
Sbjct: 902  VAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIII 961

Query: 575  KFIFKFHSSSSAVNQLVEMCNLGLIPDE---------MWRKLGLLSDETMTPVSLFDGFV 625
            + + +      A      +   G+ PD          + RK      + +      DGF+
Sbjct: 962  QGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFM 1021

Query: 626  PCER 629
            P ER
Sbjct: 1022 PSER 1025



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 85/297 (28%), Positives = 136/297 (45%), Gaps = 5/297 (1%)

Query: 264 GFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP 323
           GF    R + A  L+ +MV +   P++V +T L+      + +     F   +E  G + 
Sbjct: 45  GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLL 379
           DL    +LI C  +      AL V   +++L   P   TF SLL   CL  R    FSL+
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164

Query: 380 PKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
             +V     E ++VVYN L+   CK G  N A++L N M  KG   D  ++  LL GLC 
Sbjct: 165 ILMVKS-GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCY 223

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
           + +  +A  + + ++  +   +    TA++D  ++ G   +A +L++  I      + V+
Sbjct: 224 SGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVT 283

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
           Y   I GL   GR  +A   +  M      PN  TY  ++  FCK R +    +L Q
Sbjct: 284 YNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQ 340



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/359 (22%), Positives = 153/359 (42%), Gaps = 38/359 (10%)

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           MV     P++  F  LL     + R          M   G S  + ++T+LI  F R  R
Sbjct: 62  MVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSR 121

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           L  A  +  KM++ G  P++VT+ SL+ GF        AFS + ++   G+ P++V +N 
Sbjct: 122 LSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNT 181

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE- 389
           LID L                                   C +G  ++  +L+  +E + 
Sbjct: 182 LIDGL-----------------------------------CKNGELNIALELLNEMEKKG 206

Query: 390 --ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
             AD+V YN LL+  C +G  + A ++   M+ +   PD  +F  L+        +DEA 
Sbjct: 207 LGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQ 266

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            +Y+ ++ ++   N   + +I++ L   GR + A + F     +    +VV+Y   I G 
Sbjct: 267 ELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGF 326

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
            +    +E   L+ +M       + +TY  ++  +C+   +++   +   ++  R+  D
Sbjct: 327 CKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPD 385



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 113/534 (21%), Positives = 208/534 (38%), Gaps = 87/534 (16%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           + GR    +     +A  GC     T+   +  + +  M    ++ F  M   GF  + F
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIF 352

Query: 156 ARNIVMDVLFKIGRVDLGIKVL---------------------------KETQLPNF--- 185
             N ++    ++G++ + + +                             E+ L  F   
Sbjct: 353 TYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDM 412

Query: 186 ---------LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
                    +++NI +  LCK + V    ++   +  +G  P+ R + I++   CK G  
Sbjct: 413 RESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPR 472

Query: 237 AEAYQLLGLMITLGTSLSVNAWTVLID-----------GFRRLRRLDMAGYLW-EKMVQN 284
            EA +L+  M   G    +NA    ++             R +     +   W ++++  
Sbjct: 473 READELIRRMKEEGIICQMNAEDDHLEEHSSSNKEISLSLREIWERSKSNPFWMQRLIPI 532

Query: 285 GCSPNVVTY---------------TSLIKGFMEAK----------------MFSIAFS-F 312
             S +V  +               TSL + F  A                  F  AFS F
Sbjct: 533 AFSSSVKGFVRRHYLLLERGNNPETSLSRSFSGASHHHHYRERLRNELHCIKFDDAFSLF 592

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
            +ML+S    P +V    ++  ++KM  +D  + +Y  +  L +  D Y+F  L+   C 
Sbjct: 593 CEMLQSRP-IPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCR 651

Query: 373 SGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
             R SL   L   +  L     +V   +LL+ FC+     +AV L ++M   GF P+   
Sbjct: 652 CSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVI 711

Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
           +  ++ GLC  R ++ A+ V+  +       +A  +  ++  L  +GR   A +L R  +
Sbjct: 712 YNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMV 771

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
             K   +V+ +T  I   ++ G   EA  LY +M   +V PN +TY  ++  FC
Sbjct: 772 KRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 825



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 68/283 (24%), Positives = 126/283 (44%), Gaps = 3/283 (1%)

Query: 270 RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHN 329
           + D A  L+ +M+Q+   P++V +T ++    +   F I       +E+ G + DL    
Sbjct: 584 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 643

Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV---CGL 386
           +LI C  +      AL +   +++L   P   T  SLL+  C   RF     LV    G 
Sbjct: 644 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 703

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
               ++V+YN +++  CK    N A++++  M  KG   D  ++  L+ GL  + +  +A
Sbjct: 704 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 763

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
             + + +V      N    TA++D  ++ G   +A  L++  I      +V +Y   I G
Sbjct: 764 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 823

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
               G   +A  ++  M      P+  TY  ++  FCK + ++
Sbjct: 824 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVE 866



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 49/227 (21%), Positives = 104/227 (45%), Gaps = 3/227 (1%)

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNA 397
           ++DA  ++  ++  + +P    F  LL+      R+  +      +E   +  DL  +  
Sbjct: 52  FEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTI 111

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
           L+  FC+    + A+ +   M+  G+ P   +F  LL G C   +I +A ++   +V + 
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAY 517
              N  V+  ++D L + G  + A++L      +    DVV+Y   + GL   GR  +A 
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231

Query: 518 ILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
            +   M   ++ P+  T+  ++  F K+ N+   + L +++I + ++
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVD 278


>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 588

 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 124/474 (26%), Positives = 224/474 (47%), Gaps = 18/474 (3%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
           FD M R     + F+ N ++  L KI        + K+  L    P+ L+ NI +  LC 
Sbjct: 84  FDLMMR-----SIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCN 138

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
           +N ++     +  ++R+G+ P+V  F  L+   C   RI EA +L   M  LG + +V  
Sbjct: 139 VNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVT 198

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQN------GCSPNVVTYTSLIKGFMEAKMFSIAFS 311
           +  LI G   L  +++A    ++M+ +       C PNV++Y+ +I G  +   +  A  
Sbjct: 199 YGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAIC 258

Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
             + +  +G  P++V  +VLID L K G    A  + + ++++ +VP+ +T+ SL+   C
Sbjct: 259 LFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFC 318

Query: 372 LSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
           L G  +   +L   +     E D++ YN L++ +CK     +A+KL+N ML  G  PD  
Sbjct: 319 LVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVK 378

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
           +   LL+ L  A K+D+A  +++ I       +  +    +D L + G   +A++LF   
Sbjct: 379 TSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNEL 438

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
                 LD+ ++   I GL + G+ E A+ L+ ++    + P+A  Y  M+  FCK+  +
Sbjct: 439 ESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQV 498

Query: 549 KMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
                L Q + +     D  T   L +  ++ +     V  L  M    + PD+
Sbjct: 499 DKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDD 552



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 116/472 (24%), Positives = 216/472 (45%), Gaps = 48/472 (10%)

Query: 133 EMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI------------------ 174
           E Y  V   + +M   G  P+    NI+++ L  + R++ G+                  
Sbjct: 105 EHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTF 164

Query: 175 -----------KVLKETQL----------PNFLSFNIALCNLCKLNDVS-NVKDVIGMMV 212
                      ++++ T+L          PN +++   +  LC L +++  +K    M+ 
Sbjct: 165 TTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLN 224

Query: 213 RKGFY-----PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
               Y     PNV  + I+++  CK+G   EA  L   M+  G   +V  ++VLID   +
Sbjct: 225 DTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCK 284

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
             ++  A  L E M+Q G  PN+ TYTSLIKGF      + A      + S+G+ PD++ 
Sbjct: 285 EGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVIS 344

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF---SLLPKLVC 384
           +N+LI+   K    ++A+ +++ +L + + PD  T   LL  + L+G+      L +++ 
Sbjct: 345 YNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIK 404

Query: 385 GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
              +  DL +    L   CK G+  +A+KL+N +       D  +F  L+ GLC A K++
Sbjct: 405 PYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLE 464

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
            A  +++ +       +A  +++++    + G+  KA  LF++        D+++Y++ +
Sbjct: 465 TAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILM 524

Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
           RG  E  + E+   L  +M    V P+   Y ++    CK+   K    LLQ
Sbjct: 525 RGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDLLQ 576



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/438 (22%), Positives = 206/438 (47%), Gaps = 28/438 (6%)

Query: 76  QRDYFHDVQSF---------DHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFL--L 124
           +R Y  DV +F         +H I   T+L  R + + G    +   G +IK    L  +
Sbjct: 154 RRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKL-GCTPNVVTYGTLIKGLCALGNI 212

Query: 125 FLRIYWRGEMYGMVLEAFDEMGRFGFT--PNTFARNIVMDVLFKIGRVDLGI----KVLK 178
            + + W  EM        ++   + F   PN  + +I++D L K+G  +  I    +++ 
Sbjct: 213 NIALKWHQEM-------LNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVD 265

Query: 179 ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAE 238
           +   PN ++F++ +  LCK   V   K ++ MM++ G  PN+  +  L+  FC +G +  
Sbjct: 266 QGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNS 325

Query: 239 AYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIK 298
           A +L   M + G    V ++ +LI+G+ +  +++ A  L+ +M+  G  P+V T   L+K
Sbjct: 326 AKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLK 385

Query: 299 GFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP 358
               A     A     +++      DL    + +D L K G   +A+ +++ L    +  
Sbjct: 386 ALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKL 445

Query: 359 DSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLY 415
           D  TF  L+  +C +G+     +L   L    ++ D + Y++++  FCK G  ++A  L+
Sbjct: 446 DIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILF 505

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
             M + G +PD  ++  L+RG   + K+++ + +   ++  +   +  ++  + D + + 
Sbjct: 506 QKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKD 565

Query: 476 GRCHKAIQLFRRAIVEKY 493
            +  + + L +R  V+K+
Sbjct: 566 EKYKEWLDLLQRFFVQKH 583


>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 122/474 (25%), Positives = 215/474 (45%), Gaps = 12/474 (2%)

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNI 190
           + M+   +  M + G  PN F  NI++  L K  RVD   K+L E       P+ +S+  
Sbjct: 162 FQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTT 221

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            + +LCKL  V   +++        F P+V ++  L+N  CK     EA+QLL  M+  G
Sbjct: 222 LISSLCKLGKVKEARELA-----MSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKG 276

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
              +V ++T +I+       ++++  +  KM   GCSPN+ T+TSLIKGF        A 
Sbjct: 277 IDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEAL 336

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
            F D +  EG  P++V +N L+  L    S  DA+ V++ +      P+  T+ +L+   
Sbjct: 337 DFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGY 396

Query: 371 CLSGRF---SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
             +G     S +   +       ++V Y  ++   C+    NQA  L   M  +   P+ 
Sbjct: 397 AKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNT 456

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
            +F   ++GLCG+ ++D AI V+  +  +    N   +  ++D L++  R  +A  L + 
Sbjct: 457 VTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKD 516

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN 547
                  L++V+Y   I G    G   EA  L  +M      P+A T  +++ ++CK+  
Sbjct: 517 MEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGK 576

Query: 548 IKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           + +  +L+  +   +   D      L   I        A+  L  M + G+ P+
Sbjct: 577 VNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPN 630



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 122/506 (24%), Positives = 213/506 (42%), Gaps = 42/506 (8%)

Query: 65  IALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLL 124
           +AL +F   A  + + H   ++  MI  +       + V+ ++ ++   G       F+ 
Sbjct: 58  LALEYFKSIANSKSFKHTPLTYQMMIEKLAS-EREMDCVQYLLQQMKLEGISCSEDLFIS 116

Query: 125 FLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KET 180
            +  Y R       L+ F  M  F   P     N ++D L    R  +   +     K+ 
Sbjct: 117 VIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDG 176

Query: 181 QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAY 240
             PN  ++NI L  LCK N V     ++  M  KG  P+   +  L++  CK+G++ EA 
Sbjct: 177 MEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAR 236

Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
           +L      +  + SV  +  LI+G  +    + A  L ++M+  G  PNV++YT++I   
Sbjct: 237 EL-----AMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINAL 291

Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
            +A    ++ + L  + + G +P+L     LI      G   +ALD +D ++   +VP+ 
Sbjct: 292 SDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPN- 350

Query: 361 YTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
                                          +V YNAL+   C       AV ++N M  
Sbjct: 351 -------------------------------VVAYNALMHGLCSKRSLGDAVSVFNQMEI 379

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
            G  P+  ++  L+ G   A  +D A  V+  ++ +    N   +T +VD L      ++
Sbjct: 380 NGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQ 439

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
           A  L     VE  P + V++   I+GL   GR + A  ++ QM +    PN  TY  +L 
Sbjct: 440 AYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLD 499

Query: 541 SFCKERNIKMVKRLLQDVIDARIELD 566
           S  K+R       L++D+    IEL+
Sbjct: 500 SLLKDRRFGEAFGLVKDMEHRGIELN 525



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 178/410 (43%), Gaps = 45/410 (10%)

Query: 140 EAF---DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIAL 192
           EAF   DEM   G  PN  +   +++ L   G V+L + VL +       PN  +F   +
Sbjct: 264 EAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLI 323

Query: 193 CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
                        D    M+R+G  PNV  +  L++  C    + +A  +   M   G  
Sbjct: 324 KGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCC 383

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
            +V  ++ LIDG+ +   LD A  +W  M+ +GC PNVV YT ++       MF+ A+  
Sbjct: 384 PNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCL 443

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
           ++ ++ E   P+ V  N  I  L   G  D A+ V+D +      P++ T+  LL ++  
Sbjct: 444 IENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLK 503

Query: 373 SGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
             RF     LV  +E   +E +LV YN ++  +C AG   +A++L   M+ +G  PD   
Sbjct: 504 DRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPD--- 560

Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
                           AI V                  ++D   + G+ + AIQL  R  
Sbjct: 561 ----------------AITV----------------NIVIDAYCKQGKVNIAIQLMDRLS 588

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
             K+  D+++YT  I G+      EEA +   +M    + PN  T+ V++
Sbjct: 589 AGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLV 638



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 6/244 (2%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG 173
           GC      +   + +  R  M+       + M      PNT   N  +  L   GRVD  
Sbjct: 416 GCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWA 475

Query: 174 IKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
           IKV  +       PN  ++N  L +L K         ++  M  +G   N+  +  ++  
Sbjct: 476 IKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYG 535

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
           +C  G + EA +LLG M+  GT        ++ID + +  ++++A  L +++      P+
Sbjct: 536 YCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPD 595

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL-SKMGSYDDALDVY 348
           ++ YTSLI G         A  +L  + SEG +P++   NVL+  L S MG +  A+   
Sbjct: 596 IIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMG-HSGAVQFL 654

Query: 349 DGLL 352
           D +L
Sbjct: 655 DAVL 658



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 105/243 (43%), Gaps = 5/243 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           +V ++  M+ V+ R    F     ++  +    C     TF  F++           ++ 
Sbjct: 420 NVVAYTCMVDVLCR-NSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKV 478

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP----NFLSFNIALCNLCK 197
           FD+MG  G  PNT   N ++D L K  R      ++K+ +      N +++N  +   C 
Sbjct: 479 FDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCC 538

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              +    +++G MV +G  P+     I+++ +CK G++  A QL+  +        + A
Sbjct: 539 AGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIA 598

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T LI G      ++ A     +M+  G SPNV T+  L++        S A  FLD + 
Sbjct: 599 YTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDAVL 658

Query: 318 SEG 320
             G
Sbjct: 659 GSG 661


>gi|240255563|ref|NP_190542.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546755|sp|P0C8A0.1|PP275_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49730
 gi|332645062|gb|AEE78583.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 638

 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 129/541 (23%), Positives = 239/541 (44%), Gaps = 44/541 (8%)

Query: 29  HQISSPKVCATTHQDFPIILAPHIVHSTLLNC-PSDLIALSFFIWCAKQRDYFHDVQSFD 87
           H    PK+    ++   I L P ++   L  C  +  +   FF+W  KQ  YFH  +   
Sbjct: 77  HHSRVPKLELALNES-GIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYEVCK 135

Query: 88  HMISVVTRLTGRFETVRGIVGELARVGC-VIKAQTFLLFLRIYWRGEMYGMVLEAFDEMG 146
            M+ +++++  +F  V G++ E+ +    +I+ + F++ +R +    M    +E  DEM 
Sbjct: 136 SMVMILSKMR-QFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMP 194

Query: 147 RFGFTPNTFARNIVMDVLFKIGRVDLGIKV---LKETQLPNFLSFNIALCNLCKLNDVSN 203
           ++G  P+ +    ++D L K G V    KV   ++E   PN   F   L   C+   +  
Sbjct: 195 KYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLME 254

Query: 204 VKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLID 263
            K+V+  M   G  P++ +F  LL+ +   G++A+AY L+  M   G   +VN +TVLI 
Sbjct: 255 AKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQ 314

Query: 264 GF-RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
              R  +R+D A  ++ +M + GC  ++VTYT+LI GF +  M    +S LD +  +G  
Sbjct: 315 ALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVM 374

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL 382
           P  V +  ++    K   +++ L++ + +      P                        
Sbjct: 375 PSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHP------------------------ 410

Query: 383 VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
                   DL++YN ++   CK G   +AV+L+N M   G +P   +FV ++ G      
Sbjct: 411 --------DLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGF 462

Query: 443 IDEAINVYQGIVMNN--PAVNAHVHTAIVDRLIEAGRCHKAIQLFR--RAIVEKYPLDVV 498
           + EA N ++ +V      A       ++++ L+   +   A  ++           L+V 
Sbjct: 463 LIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVS 522

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           ++T+ I  L   G  +EA      M  + + P   TY  ++    K  N  +   + + V
Sbjct: 523 AWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGLNKLYNRTIAAEITEKV 582

Query: 559 I 559
           +
Sbjct: 583 V 583


>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
 gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g64583, mitochondrial; Flags: Precursor
 gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
          Length = 512

 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 102/364 (28%), Positives = 187/364 (51%), Gaps = 3/364 (0%)

Query: 184 NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
           +  SF I +   C+ + +S    V+G M++ G+ P++  F  LL+ FC + RI +A+ L+
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
            LM+  G   +V  +  LIDG  +   L++A  L  +M + G   +VVTY +L+ G   +
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
             +S A   L  +      PD+V    LID   K G+ D+A ++Y  +++  + P++ T+
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284

Query: 364 CSLLSTVCLSGRFSLLPK---LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
            S+++ +C+ GR     K   L+       ++V YN L+S FCK    ++ +KL+  M  
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
           +GF  D +++  L+ G C   K+  A++++  +V      +   H  ++  L   G    
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIES 404

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
           A+  F      +  + +V+Y + I GL +  + E+A+ L+ ++    V P+A TY +M+L
Sbjct: 405 ALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMIL 464

Query: 541 SFCK 544
             CK
Sbjct: 465 GLCK 468



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 114/432 (26%), Positives = 198/432 (45%), Gaps = 17/432 (3%)

Query: 50  PHIVHST-LLNCPSDLIALSFFIWCAKQRDYF---HDVQSFDHMISVVTRLTGRFETVRG 105
           P IV  T LL   ++L      I+ +++ + +   HD+ SF  +I    R + R      
Sbjct: 69  PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCS-RLSFALS 127

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           ++G++ ++G      TF   L  +      G        M + G+ PN    N ++D L 
Sbjct: 128 VLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLC 187

Query: 166 KIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
           K G +++ +++L E +      + +++N  L  LC     S+   ++  M+++   P+V 
Sbjct: 188 KNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVV 247

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            F  L++ F K G + EA +L   MI      +   +  +I+G     RL  A   ++ M
Sbjct: 248 TFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLM 307

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
              GC PNVVTY +LI GF + +M          +  EG   D+  +N LI    ++G  
Sbjct: 308 ASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKL 367

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF-SLLPKLVCGLEVEA--DLVVYNAL 398
             ALD++  ++  ++ PD  T C LL  +C++G   S L K     E E    +V YN +
Sbjct: 368 RVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIM 427

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG---ARKIDEAINVY--QGI 453
           +   CKA    +A +L+  +  +G  PD  ++  ++ GLC     R+ DE I     +GI
Sbjct: 428 IHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487

Query: 454 VMNNPAVNAHVH 465
           +    A + H+ 
Sbjct: 488 ICQMNAEDDHLE 499



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 85/297 (28%), Positives = 136/297 (45%), Gaps = 5/297 (1%)

Query: 264 GFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP 323
           GF    R + A  L+ +MV +   P++V +T L+      + +     F   +E  G + 
Sbjct: 45  GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLL 379
           DL    +LI C  +      AL V   +++L   P   TF SLL   CL  R    FSL+
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164

Query: 380 PKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
             +V     E ++VVYN L+   CK G  N A++L N M  KG   D  ++  LL GLC 
Sbjct: 165 ILMVKS-GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCY 223

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
           + +  +A  + + ++  +   +    TA++D  ++ G   +A +L++  I      + V+
Sbjct: 224 SGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVT 283

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
           Y   I GL   GR  +A   +  M      PN  TY  ++  FCK R +    +L Q
Sbjct: 284 YNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQ 340



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/359 (22%), Positives = 153/359 (42%), Gaps = 38/359 (10%)

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           MV     P++  F  LL     + R          M   G S  + ++T+LI  F R  R
Sbjct: 62  MVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSR 121

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           L  A  +  KM++ G  P++VT+ SL+ GF        AFS + ++   G+ P++V +N 
Sbjct: 122 LSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNT 181

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE- 389
           LID L                                   C +G  ++  +L+  +E + 
Sbjct: 182 LIDGL-----------------------------------CKNGELNIALELLNEMEKKG 206

Query: 390 --ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
             AD+V YN LL+  C +G  + A ++   M+ +   PD  +F  L+        +DEA 
Sbjct: 207 LGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQ 266

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            +Y+ ++ ++   N   + +I++ L   GR + A + F     +    +VV+Y   I G 
Sbjct: 267 ELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGF 326

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
            +    +E   L+ +M       + +TY  ++  +C+   +++   +   ++  R+  D
Sbjct: 327 CKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPD 385



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 49/227 (21%), Positives = 104/227 (45%), Gaps = 3/227 (1%)

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNA 397
           ++DA  ++  ++  + +P    F  LL+      R+  +      +E   +  DL  +  
Sbjct: 52  FEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTI 111

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
           L+  FC+    + A+ +   M+  G+ P   +F  LL G C   +I +A ++   +V + 
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAY 517
              N  V+  ++D L + G  + A++L      +    DVV+Y   + GL   GR  +A 
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231

Query: 518 ILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
            +   M   ++ P+  T+  ++  F K+ N+   + L +++I + ++
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVD 278


>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
          Length = 1096

 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 138/598 (23%), Positives = 245/598 (40%), Gaps = 63/598 (10%)

Query: 65  IALSFFIWCAKQRDYFHD---------------VQSFD---HMISVVTRLTGRFETVRGI 106
           +AL F  W  KQ     D                + +D   H++  ++ ++G+   V G 
Sbjct: 52  LALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFGA 111

Query: 107 VGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK 166
           +    R+ C      + + +R+Y R  M    LE F  MG +GF P+ +  N ++  + K
Sbjct: 112 LMTTYRL-CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVK 170

Query: 167 IGRVDLGI-----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
            G  D+ +     ++LK    P+  +FNI +  LC          ++  M + G+ P + 
Sbjct: 171 SGE-DVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIV 229

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            +  +L+ +CK GR   A +LL  M + G    V  + +LI    R  R+     L   M
Sbjct: 230 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 289

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
            +    PN VTY +LI GF       IA   L+ + S G +P+ V  N LID     G++
Sbjct: 290 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 349

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNAL 398
            +AL ++  +    L P   ++  LL  +C +  F L       ++   V    + Y  +
Sbjct: 350 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 409

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK---------------- 442
           +   CK GF ++AV L N M   G  PD  ++  L+ G C   +                
Sbjct: 410 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 469

Query: 443 -------------------IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
                              + EAI +Y+ +++     +      +V  L +AG+  +A +
Sbjct: 470 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE 529

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
             R    +    + VS+   I G    G   +A+ ++ +M  +   P  +TY  +L   C
Sbjct: 530 FMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLC 589

Query: 544 KERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           K  +++  ++ L+ +      +D      L   + K  + + AV+   EM    ++PD
Sbjct: 590 KGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPD 647



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 128/547 (23%), Positives = 217/547 (39%), Gaps = 61/547 (11%)

Query: 72  WCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLR---I 128
           W  K+  +   ++  DHM S    +     T   ++ +L R   + K    L  +R   I
Sbjct: 237 WYCKKGRFKAAIELLDHMKS--KGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMI 294

Query: 129 YWRGEMYGMVLEAF-------------DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIK 175
           +     Y  ++  F             +EM  FG +PN    N ++D     G     +K
Sbjct: 295 HPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALK 354

Query: 176 VLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFC 231
           +    +     P+ +S+ + L  LCK  +    +     M R G       +  +++  C
Sbjct: 355 MFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLC 414

Query: 232 KMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVV 291
           K G + EA  LL  M   G    +  ++ LI+GF ++ R   A  +  ++ + G SPN +
Sbjct: 415 KNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGI 474

Query: 292 TYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG------------ 339
            Y++LI           A    + +  EGH  D    NVL+  L K G            
Sbjct: 475 IYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCM 534

Query: 340 ----------SYD-------------DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
                     S+D              A  V+D + ++   P  +T+ SLL  +C  G  
Sbjct: 535 TSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHL 594

Query: 377 SLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
               K +  L       D V+YN LL+  CK+G   +AV L+  M+ +   PD+Y++  L
Sbjct: 595 REAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSL 654

Query: 434 LRGLCGARKIDEAI-NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           + GLC   K   AI    +     N   N  ++T  VD + +AG+    I    +     
Sbjct: 655 ISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLG 714

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVK 552
           +  D+V+    I G    G+ E+   L  +M +    PN  TY ++L  + K +++    
Sbjct: 715 HTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSF 774

Query: 553 RLLQDVI 559
            L + +I
Sbjct: 775 LLYRSII 781



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 109/477 (22%), Positives = 183/477 (38%), Gaps = 80/477 (16%)

Query: 142  FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ-LP---NFLSFNIALCNLCK 197
            FDEM + G  P  F    ++  L K G +    K LK    +P   + + +N  L  +CK
Sbjct: 566  FDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCK 625

Query: 198  LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              +++    + G MV++   P+   +  L++  C+ G+   A          G  L    
Sbjct: 626  SGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKV 685

Query: 258  -WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
             +T  +DG  +  +     Y  E+M   G +P++VT  ++I G+            L  +
Sbjct: 686  MYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEM 745

Query: 317  ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
             ++   P+L  +N+L+   SK      +  +Y  ++   ++PD  T  SL+  +C S   
Sbjct: 746  GNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNML 805

Query: 377  SL----LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM------LDK----- 421
             +    L   +C   VE D   +N L+S  C  G  N A  L   M      LDK     
Sbjct: 806  EIGLKILKAFIC-RGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDA 864

Query: 422  ------------------------GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
                                    G +P++  ++GL+ GLC    I  A  V + ++ + 
Sbjct: 865  MVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHK 924

Query: 458  PAVNAHVHTAIVDRLIEAGRCHKAIQLFR------------------------------- 486
                    +A+V  L + G+  +A  L R                               
Sbjct: 925  ICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEAL 984

Query: 487  --RAIVEK--YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
              R ++      LD+VSY V I GL   G    A+ LY +MK      NA TY+ ++
Sbjct: 985  ELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALI 1041



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 105/497 (21%), Positives = 206/497 (41%), Gaps = 23/497 (4%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D+ ++  +I+   ++ GRF+T + IV  + RVG       +   +    R       +  
Sbjct: 437 DIVTYSALINGFCKV-GRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRI 495

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCK 197
           ++ M   G T + F  N+++  L K G+V    + ++    +  LPN +SF+      C 
Sbjct: 496 YEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFD------CL 549

Query: 198 LNDVSNVKD------VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           +N   N  +      V   M + G +P    +  LL   CK G + EA + L  +  +  
Sbjct: 550 INGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPA 609

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
           ++    +  L+    +   L  A  L+ +MVQ    P+  TYTSLI G        IA  
Sbjct: 610 AVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAIL 669

Query: 312 FLDMLESEGHA-PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
           F    E+ G+  P+ V +   +D + K G +   +   + +  L   PD  T  +++   
Sbjct: 670 FAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGY 729

Query: 371 CLSGRFS----LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
              G+      LLP++        +L  YN LL  + K    + +  LY +++  G  PD
Sbjct: 730 SRMGKIEKTNDLLPEM-GNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPD 788

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
             +   L+ G+C +  ++  + + +  +     V+ +    ++ +    G  + A  L +
Sbjct: 789 KLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVK 848

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
                   LD  +    +  L    R +E+ ++  +M    + P +  Y  ++   C+  
Sbjct: 849 VMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVG 908

Query: 547 NIKMVKRLLQDVIDARI 563
           +IK    + +++I  +I
Sbjct: 909 DIKTAFVVKEEMIAHKI 925



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 146/339 (43%), Gaps = 46/339 (13%)

Query: 143  DEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKL 198
            ++M   G TP+    N ++D   ++G++    DL  ++  +   PN  ++NI L    K 
Sbjct: 708  EQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKR 767

Query: 199  NDVSN-------------VKDV-----------------IGMMVRKGFY-----PNVRMF 223
             DVS              + D                  IG+ + K F       +   F
Sbjct: 768  KDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTF 827

Query: 224  EILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQ 283
             +L++  C  G I  A+ L+ +M +LG SL  +    ++    R  R   +  +  +M +
Sbjct: 828  NMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSK 887

Query: 284  NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
             G SP    Y  LI G         AF   + + +    P  V  + ++  L+K G  D+
Sbjct: 888  QGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADE 947

Query: 344  ALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF--SLLPKLV---CGLEVEADLVVYNAL 398
            A  +   +L++KLVP   +F +L+   C +G    +L  ++V   CGL++  DLV YN L
Sbjct: 948  ATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKL--DLVSYNVL 1005

Query: 399  LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
            ++  C  G    A +LY  M   GF  +  ++  L+RGL
Sbjct: 1006 ITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1044



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 101/238 (42%), Gaps = 41/238 (17%)

Query: 82   DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
            D  + D M+SV+ R   RF+  R ++ E+++ G   +++ ++  +    R    G +  A
Sbjct: 858  DKDTCDAMVSVLNR-NHRFQESRMVLHEMSKQGISPESRKYIGLINGLCR---VGDIKTA 913

Query: 142  F---DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKL 198
            F   +EM      P   A + ++  L K G+ D    +L+                    
Sbjct: 914  FVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLR-------------------- 953

Query: 199  NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
                        M++    P +  F  L++  CK G + EA +L  +M   G  L + ++
Sbjct: 954  -----------FMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSY 1002

Query: 259  TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
             VLI G      + +A  L+E+M  +G   N  TY +LI+G +  +    AFS  D++
Sbjct: 1003 NVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARE---TAFSGADII 1057


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/422 (25%), Positives = 205/422 (48%), Gaps = 8/422 (1%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           FD M   G  PN +  NI++  L   G     + +L++ +     PN +++N  +    +
Sbjct: 138 FDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFR 197

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
             +V   + ++GMM+  G  PN+  F  ++N  CK G++ +A ++   M+  G +    +
Sbjct: 198 AGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVS 257

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  L+ G+ +      A  ++ +M Q G  P+VVT+TSLI    +A     A + +  + 
Sbjct: 258 YNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMR 317

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G   + V    LID   K G  DDAL    G+ + ++ P    + +L++  C+ GR  
Sbjct: 318 ERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMD 377

Query: 378 LLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
              +L+  +E +    D+V Y+ ++S +CK    + A +L   ML+KG  PD  ++  L+
Sbjct: 378 EARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLI 437

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
           R LC  +++ +A  +++ ++      +   +T+++D   + G   +A+ L  + +     
Sbjct: 438 RVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVL 497

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
            DVV+Y+V I GL +  R  EA  L  ++ H    P    Y   L+  C++  +K V  L
Sbjct: 498 PDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDA-LMHCCRKAELKSVLAL 556

Query: 555 LQ 556
           L+
Sbjct: 557 LK 558



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 102/391 (26%), Positives = 179/391 (45%), Gaps = 4/391 (1%)

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
           +P+ L++N  L  L   + +++ +     M+  G  PNV  + IL+   C  G   EA  
Sbjct: 113 VPSVLAYNAVLLALSDAS-LTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALS 171

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           +L  M   G   +V  +  L+  F R   +D A  L   M+  G  PN+VT+ S++ G  
Sbjct: 172 ILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMC 231

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           +A     A    D +  EG APD V +N L+    K G   +AL V+  + +  ++PD  
Sbjct: 232 KAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVV 291

Query: 362 TFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           TF SL+  +C +G       LV  +    ++ + V + AL+  FCK GF + A+     M
Sbjct: 292 TFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGM 351

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
                 P    +  L+ G C   ++DEA  +   +       +   ++ I+    +    
Sbjct: 352 RQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDT 411

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
           H A +L ++ + +    D ++Y+  IR L E  R  +A++L+  M  + + P+ +TY  +
Sbjct: 412 HSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSL 471

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
           +   CKE N++    L   ++ A +  D  T
Sbjct: 472 IDGHCKEGNVERALSLHDKMVKAGVLPDVVT 502



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 125/532 (23%), Positives = 230/532 (43%), Gaps = 36/532 (6%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWR-GE------MYGMVLEAFDEMGRFGF 150
           G  +    I+ ++   GC     T+   +  ++R GE      + GM+L+        G 
Sbjct: 164 GHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDG-------GL 216

Query: 151 TPNTFARNIVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCKLNDVSNVKD 206
            PN    N +++ + K G+++   KV    ++E   P+ +S+N  +   CK         
Sbjct: 217 KPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALS 276

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
           V   M +KG  P+V  F  L++  CK G +  A  L+  M   G  ++   +T LIDGF 
Sbjct: 277 VFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFC 336

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
           +   LD A      M Q    P+VV Y +LI G+        A   L  +E++G  PD+V
Sbjct: 337 KKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVV 396

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLV 383
            ++ +I    K      A ++   +LE  ++PD+ T+ SL+  +C   R S   +L K +
Sbjct: 397 TYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNM 456

Query: 384 CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
             L ++ D   Y +L+   CK G   +A+ L++ M+  G  PD  ++  L+ GL  + + 
Sbjct: 457 IKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARA 516

Query: 444 DEAINV-----YQGIVMNNPAVNAHVHT----------AIVDRLIEAGRCHKAIQLFRRA 488
            EA  +     ++  +  N   +A +H           A++      G  ++A ++++  
Sbjct: 517 MEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSM 576

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
           +   + LD   Y+V I G    G   +A   + QM      PN+ +   ++    +   +
Sbjct: 577 LDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMV 636

Query: 549 KMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
               +++Q +++     D   S  L        +  + ++ L  M   GL+P
Sbjct: 637 VEADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLP 688



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/323 (23%), Positives = 152/323 (47%), Gaps = 6/323 (1%)

Query: 285 GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
           G  P+V+ Y +++    +A + S A  F D + S+G AP++  +N+LI  L   G   +A
Sbjct: 111 GYVPSVLAYNAVLLALSDASLTS-ARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA----DLVVYNALLS 400
           L +   +      P+  T+ +L++    +G      +LV G+ ++     +LV +N++++
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLV-GMMLDGGLKPNLVTFNSMVN 228

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
             CKAG    A K+++ M+ +G  PD  S+  L+ G C A    EA++V+  +       
Sbjct: 229 GMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMP 288

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
           +    T+++  + +AG    A+ L R+       ++ V++T  I G  + G  ++A +  
Sbjct: 289 DVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAV 348

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKF 580
             M+   + P+   Y  ++  +C    +   + LL ++    ++ D  T   +     K 
Sbjct: 349 RGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKN 408

Query: 581 HSSSSAVNQLVEMCNLGLIPDEM 603
             + SA     +M   G++PD +
Sbjct: 409 CDTHSAFELNQQMLEKGVLPDAI 431


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 119/505 (23%), Positives = 227/505 (44%), Gaps = 49/505 (9%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR      ++ ++   GC     T+ + L    +   +G  +E  DEM   G TPN    
Sbjct: 159 GRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTY 218

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N++++ + + GRVD   + L         P+ +S+   L  LC      +V+++   M+ 
Sbjct: 219 NVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMME 278

Query: 214 KGFYPN-------VRMF----------------------------EILLNCFCKMGRIAE 238
           K   PN       VR F                             I++N  CK GR+ +
Sbjct: 279 KNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDD 338

Query: 239 AYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIK 298
           A+Q L  M + G S    ++T ++ G  R  R + A  L ++MV+  C PN VT+ + I 
Sbjct: 339 AFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFIC 398

Query: 299 GFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP 358
              +  +   A   ++ +   G   ++V +N L++     G  D AL+++     +   P
Sbjct: 399 ILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF---YSMPCKP 455

Query: 359 DSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLY 415
           ++ T+ +LL+ +C + R     +L+  +   +   ++V +N L+S+FC+ G  ++A++L 
Sbjct: 456 NTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELV 515

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
             M++ G TP+  ++  LL G+      +EA+ +  G+V N  + +   +++I+  L   
Sbjct: 516 EQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSRE 575

Query: 476 GRCHKAIQLFRRAIVEKYPL--DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
            R  +AI++F   IV+   +    V Y   +  L +   T+ A   ++ M      PN  
Sbjct: 576 DRVEEAIKMFH--IVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNEL 633

Query: 534 TYRVMLLSFCKERNIKMVKRLLQDV 558
           TY  ++     E  +K  + LL+++
Sbjct: 634 TYITLIEGLANEDFLKETRDLLREL 658



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 105/411 (25%), Positives = 190/411 (46%), Gaps = 18/411 (4%)

Query: 77  RDYFHDVQSF---DHMISVVTRLTG-----RFETVRGIVGELARVGCVIKAQTFLLFLRI 128
           R++ + + S+      +S  T L G     R+E V  +  E+    C+    TF + +R 
Sbjct: 235 REFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRF 294

Query: 129 YWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PN 184
           + RG M    ++  ++M   G   NT   NIV++ + K GRVD   + L         P+
Sbjct: 295 FCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPD 354

Query: 185 FLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLG 244
            +S+   L  LC+     + K+++  MVRK   PN   F   +   C+ G I +A  L+ 
Sbjct: 355 TISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIE 414

Query: 245 LMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
            M   G  +++  +  L++GF    R+D A  L+  M    C PN +TYT+L+ G   A+
Sbjct: 415 QMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAE 471

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
               A   L  +  +  AP++V  NVL+    + G  D+A+++ + ++E    P+  T+ 
Sbjct: 472 RLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYN 531

Query: 365 SLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
           +LL  +          +L+ GL    V  D+V Y++++    +     +A+K+++ + D 
Sbjct: 532 TLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDL 591

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
           G  P    +  +L  LC     D AI+ +  +V N    N   +  +++ L
Sbjct: 592 GMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGL 642



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 126/605 (20%), Positives = 253/605 (41%), Gaps = 51/605 (8%)

Query: 43  DFPIILAPHIVHSTL--LNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRF 100
           + P   +P+  ++ L  L    DL   +  +  A  R    DV     +I  + R  GR 
Sbjct: 36  EAPSASSPNPANARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCR-RGRT 94

Query: 101 ETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIV 160
                ++    R G  +    +   +  Y R   YG +  A   +      P+ +    +
Sbjct: 95  SDAARVLRAAERSGTAVDVFAYNTLVAGYCR---YGQLDAARRLIASMPVAPDAYTYTPI 151

Query: 161 MDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
           +  L   GRV   + +L +       P+ +++ + L  +CK        +V+  M  KG 
Sbjct: 152 IRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGC 211

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
            PN+  + +++N  C+ GR+ +A + L  + + G      ++T ++ G    +R +    
Sbjct: 212 TPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEE 271

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           L+ +M++  C PN VT+  L++ F    M   A   L+ +   G A +    N++I+ + 
Sbjct: 272 LFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTIC 331

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLV--------- 383
           K G  DDA    + +      PD+ ++ ++L  +C + R+     LL ++V         
Sbjct: 332 KQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEV 391

Query: 384 ------CGL-------------------EVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
                 C L                     E ++V YNAL++ FC  G  + A++L+ +M
Sbjct: 392 TFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM 451

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
             K   P+  ++  LL GLC A ++D A  +   ++  + A N      +V    + G  
Sbjct: 452 PCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLM 508

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            +AI+L  + +      ++++Y   + G+ +   +EEA  L   +    V P+  TY  +
Sbjct: 509 DEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSI 568

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGL 598
           +    +E  ++   ++   V D  +        ++   + K  ++  A++    M + G 
Sbjct: 569 IGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGC 628

Query: 599 IPDEM 603
           +P+E+
Sbjct: 629 MPNEL 633



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/210 (20%), Positives = 84/210 (40%), Gaps = 4/210 (1%)

Query: 115 CVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI 174
           C     T+   L      E      E   EM +    PN    N+++    + G +D  I
Sbjct: 453 CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAI 512

Query: 175 KVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCF 230
           +++++       PN +++N  L  + K  +     +++  +V  G  P++  +  ++   
Sbjct: 513 ELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVL 572

Query: 231 CKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNV 290
            +  R+ EA ++  ++  LG       +  ++    +    D A   +  MV NGC PN 
Sbjct: 573 SREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNE 632

Query: 291 VTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           +TY +LI+G             L  L S G
Sbjct: 633 LTYITLIEGLANEDFLKETRDLLRELCSRG 662


>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 576

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 118/475 (24%), Positives = 216/475 (45%), Gaps = 16/475 (3%)

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCKLND 200
           M   G +P+  A   ++    KIGR     +++    +   + +  S+N+ +   CK  +
Sbjct: 105 MTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGE 164

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
           +   ++ + ++ R G  PN   ++ +L   C  G++ +A Q+LG  +       V   TV
Sbjct: 165 I---EEALRVLDRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTV 221

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           LID   +   +  A  L+ +M   GC P+VVTY  LIKGF +      A  FL  L S G
Sbjct: 222 LIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYG 281

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
             PD++ HN+++  L   G + DA+ +   +L    +P   TF  L++ +C  G   LL 
Sbjct: 282 CQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKG---LLG 338

Query: 381 KLVCGLEV------EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
           K +  LE+        +   +N L+  FC     ++A++    M+ +G  PD  ++  LL
Sbjct: 339 KALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILL 398

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
             LC   K+D+A+ +   +     + +   +  ++D L++ G+   A++L      +   
Sbjct: 399 TALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLK 458

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
            D+++ T  + GL   G+  EA   +  +K  A+ PNA+ Y  ++   CK +   +    
Sbjct: 459 PDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDF 518

Query: 555 LQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGL 609
           L D++    +    T   L K I     +  A     E+ + GL+   +  K+ L
Sbjct: 519 LADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRGLVKRSLVEKVSL 573



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/407 (24%), Positives = 186/407 (45%), Gaps = 33/407 (8%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G+ +    ++G   +  C     T  + +    +    G  ++ F+EM   G  P+    
Sbjct: 195 GKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTY 254

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N+++    K GR+D  I+ LK+       P+ +S N+ L +LC      +   ++  M+R
Sbjct: 255 NVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLR 314

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           KG  P+V  F IL+N  C+ G + +A  +L +M   G + +  ++  LI GF   + +D 
Sbjct: 315 KGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDR 374

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A    E MV  GC P++VTY  L+    +      A   L  L S+G +P L+ +N +ID
Sbjct: 375 AIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVID 434

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEA 390
            L K+G  + A+++ + +    L PD  T  S++  +   G+     K    L+   +  
Sbjct: 435 GLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRP 494

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           +  +YN++++  CK+   + A+     M+ KG  P   ++  L++G+            Y
Sbjct: 495 NAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGI-----------TY 543

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
           +G+        A   + + + L   G       L +R++VEK  L+V
Sbjct: 544 EGL--------AEDASKLSNELYSRG-------LVKRSLVEKVSLEV 575



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/433 (24%), Positives = 189/433 (43%), Gaps = 10/433 (2%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR +    I+G L   G VI   ++ + +  Y +    G + EA   + R G +PN    
Sbjct: 128 GRTKNASQIMGILEESGAVIDVTSYNVLISGYCKS---GEIEEALRVLDRMGVSPNAATY 184

Query: 158 NIVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           + V+  L   G++   ++V    L+    P+ ++  + +   CK + V     +   M  
Sbjct: 185 DAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRN 244

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           KG  P+V  + +L+  FCK GR+ EA + L  + + G    V +  +++       R   
Sbjct: 245 KGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMD 304

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L   M++ GC P+VVT+  LI    +  +   A + L+M+   GH P+    N LI 
Sbjct: 305 AMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQ 364

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA--- 390
                   D A++  + ++     PD  T+  LL+ +C  G+      ++  L  +    
Sbjct: 365 GFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSP 424

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
            L+ YN ++    K G    AV+L   M  KG  PD  +   ++ GL    K+ EA+  +
Sbjct: 425 SLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFF 484

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
             +       NA ++ +I+  L ++ +   AI      + +       +YT  I+G+   
Sbjct: 485 HYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYE 544

Query: 511 GRTEEAYILYSQM 523
           G  E+A  L +++
Sbjct: 545 GLAEDASKLSNEL 557



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 83/364 (22%), Positives = 148/364 (40%), Gaps = 78/364 (21%)

Query: 312 FLDMLESEGHAPDLVF-----------------------------------HNVLIDCLS 336
           FL+ + ++G +PD++                                    +NVLI    
Sbjct: 101 FLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYC 160

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA----DL 392
           K G  ++AL V D    + + P++ T+ ++L ++C  G+     + V G ++++    D+
Sbjct: 161 KSGEIEEALRVLD---RMGVSPNAATYDAVLCSLCDRGKLKQAMQ-VLGRQLQSKCYPDV 216

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           V    L+   CK     QA+KL+N M +KG  PD  ++  L++G C   ++DEAI   + 
Sbjct: 217 VTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKK 276

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           +       +   H  I+  L   GR   A++L    + +     VV++ + I  L + G 
Sbjct: 277 LPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGL 336

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK--------MVKR----------- 553
             +A  +   M      PN+ ++  ++  FC  + I         MV R           
Sbjct: 337 LGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNI 396

Query: 554 ----LLQD--VIDARIELDYHTSIRLTKFIFKFHS----------SSSAVNQLVEMCNLG 597
               L +D  V DA + L   +S   +  +  +++          +  AV  L EMC  G
Sbjct: 397 LLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKG 456

Query: 598 LIPD 601
           L PD
Sbjct: 457 LKPD 460


>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 966

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 127/505 (25%), Positives = 230/505 (45%), Gaps = 43/505 (8%)

Query: 79  YFHDVQSFDHMISVVTR---LTG-----RFETVRGIVGELARVGCVIKAQTFLLFLRIYW 130
           + H ++   ++ +VVT    LTG     +    + I+  +   GC      F   +  Y 
Sbjct: 293 FLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYC 352

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR--------VDLGIKVLKETQL 182
             E Y    + F+ M   G  P     NI +  +   GR        +DL  KV +E  +
Sbjct: 353 NAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSI--CGREELPNPELLDLAEKVYEEMLV 410

Query: 183 PNFL-----SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIA 237
            + +     + N A C LC +        ++  M+RKGF P+   +  ++   C+  R+ 
Sbjct: 411 ASCVLNKINTANFARC-LCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVD 469

Query: 238 EAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLI 297
           +A+ L   M  +G +  V  +T+LID F +   ++ A   +++M   GCSPNVVTYT+L+
Sbjct: 470 KAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALL 529

Query: 298 KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK-- 355
             ++++K    A      +  +   P+ + ++ LID L K G    A +VY  L+     
Sbjct: 530 HAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDN 589

Query: 356 --------------LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNAL 398
                         + P+  T+ +L++ +C + + S    L+  +     E + +VY+AL
Sbjct: 590 IESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDAL 649

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           +  FCK G  + A +++  M   G+ P  +++  L+  +    ++D A+ V   ++ ++ 
Sbjct: 650 VDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSC 709

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
             N   +TA+VD L + G   KA+ L      +    +VV+YT  I GL + G+ +    
Sbjct: 710 NPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLE 769

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFC 543
           L+ QMK     PN  TYR+++   C
Sbjct: 770 LFMQMKTKGCAPNYVTYRILINHCC 794



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 132/633 (20%), Positives = 249/633 (39%), Gaps = 98/633 (15%)

Query: 48  LAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVV-----TRLTGRF-- 100
           L   +V + L    S  + + FF+W  +Q  Y H    +D +  V+      R   R   
Sbjct: 99  LTDSVVVAVLGAVRSPELCVRFFLWAERQVGYKHTGACYDALAEVLGFEDPARTAERLLR 158

Query: 101 ---ETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
              E  R ++G L  V          L  R   +G ++G  LE    +  FG+ P+    
Sbjct: 159 EIGEDDRDVLGRLLNV----------LVRRCCLQG-LWGEALEELGRLKDFGYRPSAVTY 207

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQLPNFL-------SFNIALCNLCKLNDVSNVKDVIGM 210
           N ++ VL   G+V++  +V KE     F        SF  ALC   +        D + +
Sbjct: 208 NALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGRWG------DALDL 261

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           + R+ F  +  +   +++   +     EA   L  M       +V  +  L+ GF + ++
Sbjct: 262 LEREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQ 321

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           L     +   M+  GC+P+   + SL+  +  A+ ++ A+   + + + G  P  V +N+
Sbjct: 322 LGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNI 381

Query: 331 LID-----------------------------------------CLSKMGSYDDALDVYD 349
            I                                          CL  +G ++ A  +  
Sbjct: 382 FIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVK 441

Query: 350 GLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAG 406
            ++    VPD+ T+  +++ +C + R     LL + +  + V  D+  Y  L+  FCKAG
Sbjct: 442 EMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAG 501

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
              QA   ++ M   G +P+  ++  LL     ++++ +A +++  +V +    NA  ++
Sbjct: 502 LIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYS 561

Query: 467 AIVDRLIEAGRCHKAIQLFRRAI----------------VEKYPLDVVSYTVAIRGLLEG 510
           A++D L +AG   KA +++ + I                 +    +VV+Y   + GL + 
Sbjct: 562 ALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKA 621

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
            +  +A+ L   M      PN   Y  ++  FCK   I   + +   +         HT 
Sbjct: 622 QKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTY 681

Query: 571 IRLTKFIFKFHSSSSAVNQLVEM----CNLGLI 599
             L   +FK      A+  L +M    CN  ++
Sbjct: 682 TSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVV 714



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 116/467 (24%), Positives = 208/467 (44%), Gaps = 70/467 (14%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV ++  +I    +  G  E  +    E+   GC     T+   L  Y + +      + 
Sbjct: 486 DVYTYTILIDSFCK-AGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDI 544

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK--------------------ETQ 181
           F  M      PN    + ++D L K G +    +V                      +T 
Sbjct: 545 FHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTI 604

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
            PN +++   +  LCK   VS+  D++  M+  G  PN  +++ L++ FCK+G I  A +
Sbjct: 605 SPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQE 664

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           +   M   G   SV+ +T LID   +  RLD+A  +  +M+++ C+PNVVTYT+++ G  
Sbjct: 665 VFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLC 724

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           +      A + L ++E +G +P++V +  LID L K G  D  L+++  +      P+  
Sbjct: 725 KTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYV 784

Query: 362 TFCSLLSTVCLSG------------RFSLLPKLVCGL-------------------EVEA 390
           T+  L++  C +G            + +  PK + G                    E+E+
Sbjct: 785 TYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLGLLEEMES 844

Query: 391 D-----LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS---FVGLLRGLCGARK 442
                   VY  L+  F KAG    A++L+  M++   + +  S      L++ LC + +
Sbjct: 845 HDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQ 904

Query: 443 IDEAINVY-----QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           ++EA+ +Y     +GIV   P ++A V   +V  LIE  + ++A+QL
Sbjct: 905 VEEAVALYSEMRRRGIV---PDLSAFV--CLVKGLIERNKWNEALQL 946



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 116/513 (22%), Positives = 211/513 (41%), Gaps = 68/513 (13%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G+FE    IV E+ R G V  A T+   +    + +        F EM + G  P+ +  
Sbjct: 431 GKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTY 490

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
            I++D   K G ++       E +     PN +++   L    K   +    D+   MV 
Sbjct: 491 TILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVG 550

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI----------------TLGTSLSVNA 257
              YPN   +  L++  CK G I +A ++   +I                T   S +V  
Sbjct: 551 DACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVT 610

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  L++G  + +++  A  L + M+  GC PN + Y +L+ GF +      A      + 
Sbjct: 611 YGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMT 670

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-- 375
             G+ P +  +  LID + K G  D A+ V   +L+    P+  T+ +++  +C +G   
Sbjct: 671 KCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETE 730

Query: 376 -----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
                 SL+ K  C      ++V Y AL+    KAG  +  ++L+  M  KG  P+  ++
Sbjct: 731 KALNLLSLMEKKGC----SPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTY 786

Query: 431 VGLLRGLCGA---------------------------------RKIDEAINVYQGIVMNN 457
             L+   C A                                 ++   ++ + + +  ++
Sbjct: 787 RILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLGLLEEMESHD 846

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS---YTVAIRGLLEGGRTE 514
            A  A V+  ++D   +AGR   A++L +  +     L++ S   +T  I+ L    + E
Sbjct: 847 TAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVE 906

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN 547
           EA  LYS+M+   + P+   + V L+    ERN
Sbjct: 907 EAVALYSEMRRRGIVPDLSAF-VCLVKGLIERN 938



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 58/293 (19%), Positives = 126/293 (43%), Gaps = 10/293 (3%)

Query: 79  YFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMV 138
           Y   V ++  +I  + +  GR +    ++ ++ +  C     T+   +    +       
Sbjct: 674 YLPSVHTYTSLIDRMFK-DGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKA 732

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCN 194
           L     M + G +PN      ++D L K G+VD G+++  + +     PN++++ I + +
Sbjct: 733 LNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINH 792

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
            C    + +   ++  M +  +   ++ +   +  F K  R   +  LL  M +  T+  
Sbjct: 793 CCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSK--RFLASLGLLEEMESHDTAPI 850

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVT---YTSLIKGFMEAKMFSIAFS 311
              + +LID F +  RL+ A  L ++M++   S N+ +   +TSLI+    +     A +
Sbjct: 851 APVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAVA 910

Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
               +   G  PDL     L+  L +   +++AL +  G+ +  +  +   FC
Sbjct: 911 LYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQLCYGICQEGVNWEGNKFC 963



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 71/348 (20%), Positives = 132/348 (37%), Gaps = 16/348 (4%)

Query: 268 LRRLDMAGYLWEKMVQN-------GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           +RR  + G LW + ++        G  P+ VTY +L++    A    +AF     + + G
Sbjct: 176 VRRCCLQG-LWGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASG 234

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGL-LELKLVPDSYTFCSLLSTVCLSGRFSLL 379
              D          L K G + DALD+ +    +L  V  +     L+     +   S L
Sbjct: 235 FCMDRSTVGSFAQALCKEGRWGDALDLLEREDFKLDTVLCTQMISGLMEASLFNEAMSFL 294

Query: 380 PKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
            ++ C   +  ++V Y  LL+ F K        ++ N M+ +G  P    F  L+   C 
Sbjct: 295 HRMRCNSYI-PNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCN 353

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIV------DRLIEAGRCHKAIQLFRRAIVEKY 493
           A     A  ++  +          V+   +      + L        A +++   +V   
Sbjct: 354 AEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASC 413

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
            L+ ++     R L   G+ E+A+ +  +M      P+A TY  ++   C+ + +     
Sbjct: 414 VLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFL 473

Query: 554 LLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           L Q++    +  D +T   L     K      A +   EM + G  P+
Sbjct: 474 LFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPN 521


>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 131/552 (23%), Positives = 251/552 (45%), Gaps = 48/552 (8%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFL-L 124
           ALS+F   ++     H  ++ + M+  + R+  + E +  +   + +        T+L +
Sbjct: 105 ALSYFYSISEFPTVLHTTETCNFMLEFL-RVHDKVEDMAAVFEFMQKKIIRRDLDTYLTI 163

Query: 125 FLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ET 180
           F  +  RG +  M     ++M + GF  N ++ N ++ +L + G     ++V +    E 
Sbjct: 164 FKALSIRGGLRQMTT-VLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEG 222

Query: 181 QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAY 240
             P+  +++  +  L K  D   V  ++  M   G  PNV  F I +    + G+I EAY
Sbjct: 223 LKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAY 282

Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
           ++   M   G    +  +TVLID      +L+ A  L+ KM  NG  P+ V Y +L+  F
Sbjct: 283 EIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKF 342

Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
            +         F   +E++G+ PD+V   +L+D L K   +D+A   +D + +  ++P+ 
Sbjct: 343 NDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNL 402

Query: 361 YTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVK---- 413
           +T+ +L+  +  +GR     KL+  +E   V+     YN  + YF K+G   +AV+    
Sbjct: 403 HTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEK 462

Query: 414 -------------------------------LYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
                                          ++N + + G  PD+ ++  +++      +
Sbjct: 463 MKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQ 522

Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTV 502
           +DEA+N+   ++ N    +  V  +++D L +AGR  +A Q+F R    K    VV+Y  
Sbjct: 523 VDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNT 582

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD--VID 560
            + GL + GR ++A  L+  M      PN  ++  +L  FCK   +++  ++     V+D
Sbjct: 583 LLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMD 642

Query: 561 ARIE-LDYHTSI 571
            + + L Y+T I
Sbjct: 643 CKPDVLTYNTVI 654



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 102/419 (24%), Positives = 184/419 (43%), Gaps = 7/419 (1%)

Query: 137 MVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIAL 192
           MV+    EM   G  PN +   I + VL + G++D   ++ +    E   P+ +++ + +
Sbjct: 245 MVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLI 304

Query: 193 CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
             LC    + N K++   M   G  P+  ++  LL+ F   G +    +    M   G  
Sbjct: 305 DALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYM 364

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
             V  +T+L+D   + R  D A   ++ M + G  PN+ TY +LI G + A     A   
Sbjct: 365 PDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKL 424

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
           L  +ES G  P    +N+ ID   K G    A++ ++ +    +VP+     + L ++  
Sbjct: 425 LGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAE 484

Query: 373 SGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
            GR      +  GL    +  D V YN ++  + K G  ++AV L + M+  G  PD   
Sbjct: 485 MGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIV 544

Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
              L+  L  A ++DEA  ++  +     +     +  ++  L + GR  KAI+LF   I
Sbjct: 545 VNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMI 604

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
            +K   + +S+   +    +    E A  ++S+M  +   P+  TY  ++    KE  +
Sbjct: 605 EKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKV 663



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 101/436 (23%), Positives = 193/436 (44%), Gaps = 7/436 (1%)

Query: 101 ETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIV 160
           E V  ++ E+  +G      TF + +R+  R        E F  M   G  P+     ++
Sbjct: 244 EMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVL 303

Query: 161 MDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
           +D L   G+++    L +K+      P+ + +   L       D+   K+    M   G+
Sbjct: 304 IDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGY 363

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
            P+V  F IL++  CK     EA+    +M   G   +++ +  LI G  R  R++ A  
Sbjct: 364 MPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALK 423

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           L   M   G  P   TY   I  F ++     A    + ++++G  P++V  N  +  L+
Sbjct: 424 LLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLA 483

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLV 393
           +MG   +A  +++GL E  L PDS T+  ++      G+      L+  +     E D++
Sbjct: 484 EMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVI 543

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
           V N+L+    KAG  ++A ++++ M D   +P   ++  LL GL    ++ +AI +++ +
Sbjct: 544 VVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESM 603

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
           +    + N      ++D   +      A+++F +  V     DV++Y   I GL++  + 
Sbjct: 604 IEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKV 663

Query: 514 EEAYILYSQMKHIAVP 529
             A+  + Q+K    P
Sbjct: 664 NHAFWFFHQLKKSMHP 679



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 101/442 (22%), Positives = 199/442 (45%), Gaps = 9/442 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           +V +F   I V+ R  G+ +    I   +   GC     T+ + +             E 
Sbjct: 261 NVYTFTICIRVLGR-AGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKEL 319

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           F +M   G  P+      ++D     G +D   +   + +    +P+ ++F I +  LCK
Sbjct: 320 FVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCK 379

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
             D         +M ++G  PN+  +  L+    + GRI +A +LLG M ++G   +   
Sbjct: 380 ARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYT 439

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           + + ID F +      A   +EKM   G  PN+V   + +    E      A +  + L 
Sbjct: 440 YNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLR 499

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G APD V +N+++ C SK+G  D+A+++   ++     PD     SL+ ++  +GR  
Sbjct: 500 ENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVD 559

Query: 378 LLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
              ++   +  +++   +V YN LLS   K G   +A++L+ +M++K  +P+  SF  LL
Sbjct: 560 EAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLL 619

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
              C   +++ A+ ++  + + +   +   +  ++  LI+  + + A   F +     +P
Sbjct: 620 DCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHP 679

Query: 495 LDVVSYTVAIRGLLEGGRTEEA 516
            D V+    + GL++ G+  +A
Sbjct: 680 -DHVTICTLLPGLVKCGQIGDA 700



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 124/584 (21%), Positives = 232/584 (39%), Gaps = 82/584 (14%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G  +T +    ++   G +    TF + + +  +   +      FD M + G  PN    
Sbjct: 346 GDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTY 405

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N ++  L + GR++  +K+L   +     P   ++NI +    K  +     +    M  
Sbjct: 406 NTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKA 465

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           KG  PN+      L    +MGR+ EA  +   +   G +     + +++  + ++ ++D 
Sbjct: 466 KGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDE 525

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L  +M++NGC P+V+   SLI    +A     A+   D ++    +P +V +N L+ 
Sbjct: 526 AVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLS 585

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV---EA 390
            L K G    A+++++ ++E K  P++ +F +LL   C +    L  K+   + V   + 
Sbjct: 586 GLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKP 645

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           D++ YN ++    K    N A   ++  L K   PD+ +   LL GL    +I +AI++ 
Sbjct: 646 DVLTYNTVIYGLIKENKVNHAFWFFH-QLKKSMHPDHVTICTLLPGLVKCGQIGDAISIA 704

Query: 451 QGI---------------VMNNPAVNAHVHTAIV--DRLIEAGRC--------------- 478
           +                 +M    V A +  AI+  + L+  G C               
Sbjct: 705 RDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCK 764

Query: 479 HKAIQLFRRAIVEKYPLDV------VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
           HK  +L+   I +K+   +       SY   I  LLE   TE+A+ L+  MK++   P+A
Sbjct: 765 HKR-ELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDA 823

Query: 533 YT-----------------------------------YRVMLLSFCKERNIKMVKRLLQD 557
           +T                                   Y +++ S  K  N+        D
Sbjct: 824 FTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYD 883

Query: 558 VIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           ++ +       T   L   + K      A+    EM + G  P+
Sbjct: 884 LVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPN 927



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 102/401 (25%), Positives = 183/401 (45%), Gaps = 29/401 (7%)

Query: 40   THQDFPIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGR 99
               D  II A  +V + +    S LI L   + C  +R+ +   Q FD           +
Sbjct: 731  AEMDKAIIFAEELVLNGICREDSFLIPL-VRVLCKHKRELYA-YQIFD-----------K 777

Query: 100  FETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNI 159
            F    GI   LA   C+I     + +    W         + F +M   G  P+ F  N+
Sbjct: 778  FTKKLGISPTLASYNCLIGELLEVHYTEKAW---------DLFKDMKNVGCAPDAFTFNM 828

Query: 160  VMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG 215
            ++ V  K G++    ++ KE       P+ +++NI + +L K N++    D    +V   
Sbjct: 829  LLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSD 888

Query: 216  FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAG 275
            F P  R +  L++   K+GR+ EA +L   M   G   +   + +LI+G+ ++   + A 
Sbjct: 889  FRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETAC 948

Query: 276  YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
             L+++MV  G  P++ +YT L+     A     A  + + L+S G  PD + +N +I+ L
Sbjct: 949  QLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGL 1008

Query: 336  SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADL 392
             K    ++AL +Y+ +    +VPD YT+ SL+  + L+G      ++   L+   +E D+
Sbjct: 1009 GKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDV 1068

Query: 393  VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
              YNAL+  +  +  P  A  +Y  M+  G  P+  ++  L
Sbjct: 1069 FTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 113/506 (22%), Positives = 219/506 (43%), Gaps = 49/506 (9%)

Query: 138  VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALC 193
             +E F+ M     +PNT + N ++D   K   V+L +K+  +  +    P+ L++N  + 
Sbjct: 596  AIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIY 655

Query: 194  NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL-GLMITLGTS 252
             L K N V++       + +K  +P+      LL    K G+I +A  +    M  +   
Sbjct: 656  GLIKENKVNHAFWFFHQL-KKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFR 714

Query: 253  LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
            ++ + W  L+ G      +D A    E++V NG          L++   + K    A+  
Sbjct: 715  VNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQI 774

Query: 313  LDMLESE-GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
             D    + G +P L  +N LI  L ++   + A D++  +  +   PD++TF  LL+   
Sbjct: 775  FDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHG 834

Query: 372  LSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
             SG+ + L +L   +     + D + YN ++S   K+   ++A+  +  ++   F P   
Sbjct: 835  KSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPR 894

Query: 429  SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
            ++  L+ GL    +++EA+ +++ +       N  +   +++   + G    A QLF+R 
Sbjct: 895  TYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRM 954

Query: 489  IVEKYPLDVVSYTV-----------------------------------AIRGLLEGGRT 513
            + E    D+ SYT+                                    I GL +  R 
Sbjct: 955  VNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRM 1014

Query: 514  EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD---YHTS 570
            EEA  LY++M++  + P+ YTY  ++L+      ++  KR+ +++  A +E D   Y+  
Sbjct: 1015 EEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNAL 1074

Query: 571  IRLTKFIFK-FHSSSSAVNQLVEMCN 595
            IR         H+ +   N +V+ CN
Sbjct: 1075 IRGYSLSENPEHAYTVYKNMMVDGCN 1100



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/433 (21%), Positives = 176/433 (40%), Gaps = 56/433 (12%)

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
           V+  M + GF  N   +  L++   + G   EA ++   M++ G   S+  ++ L+    
Sbjct: 179 VLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALG 238

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
           + R  +M   L ++M   G  PNV T+T  I+    A     A+     ++ EG  PDLV
Sbjct: 239 KKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLV 298

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL 386
            + VLID L   G  ++A +++  +      PD   + +LL      G      +    +
Sbjct: 299 TYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQM 358

Query: 387 EVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
           E +    D+V +  L+   CKA   ++A   ++ M  +G  P+ +++  L+ GL  A +I
Sbjct: 359 EADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRI 418

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           ++A+ +   +        A+ +   +D   ++G   KA++ F +   +    ++V+   +
Sbjct: 419 EDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNAS 478

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           +  L E GR  EA  +++ ++   + P++ TY +M+  + K   +               
Sbjct: 479 LYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQV--------------- 523

Query: 564 ELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP------------------DEMWR 605
                                 AVN L EM   G  P                  DE W+
Sbjct: 524 --------------------DEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQ 563

Query: 606 KLGLLSDETMTPV 618
               + D  ++P 
Sbjct: 564 MFDRMKDMKLSPT 576



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 106/504 (21%), Positives = 192/504 (38%), Gaps = 60/504 (11%)

Query: 56   TLLNCPSDLIALSFFIWCAKQRD-------YFHDVQSFDH--MISVVTRLTGRFETVRGI 106
            T+++C  D++  +  I+   + +       +FH ++   H   +++ T L G  +   G 
Sbjct: 639  TVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVKC--GQ 696

Query: 107  VGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGR-FGFTPNTFARNIVMDVLF 165
            +G+   +      Q      R +W   M G ++EA  EM +   F        I  +  F
Sbjct: 697  IGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEA--EMDKAIIFAEELVLNGICREDSF 754

Query: 166  KIGRVDLGIKVLKETQL--------------PNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
             I  V +  K  +E                 P   S+N  +  L +++      D+   M
Sbjct: 755  LIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDM 814

Query: 212  VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
               G  P+   F +LL    K G+I E ++L   MI+         + ++I    +   L
Sbjct: 815  KNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNL 874

Query: 272  DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
            D A   +  +V +   P   TY  LI G  +      A    + +   G  P+    N+L
Sbjct: 875  DKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNIL 934

Query: 332  IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEAD 391
            I+   K+G                   D+ T C L   +   G             +  D
Sbjct: 935  INGYGKIG-------------------DTETACQLFKRMVNEG-------------IRPD 962

Query: 392  LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
            L  Y  L+   C AG  ++A+  +N +   G  PD  ++  ++ GL  +++++EA+ +Y 
Sbjct: 963  LKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYN 1022

Query: 452  GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
             +       + + + +++  L  AG   +A +++    +     DV +Y   IRG     
Sbjct: 1023 EMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSE 1082

Query: 512  RTEEAYILYSQMKHIAVPPNAYTY 535
              E AY +Y  M      PN  TY
Sbjct: 1083 NPEHAYTVYKNMMVDGCNPNIGTY 1106



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/333 (19%), Positives = 147/333 (44%), Gaps = 4/333 (1%)

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           DMA  ++E M +     ++ TY ++ K            + L+ +   G   +   +N L
Sbjct: 140 DMAA-VFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGL 198

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL---SGRFSLLPKLVCGLEV 388
           I  L + G   +AL+VY  ++   L P   T+ +L+  +     S    +L K +  L +
Sbjct: 199 IHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGL 258

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
             ++  +   +    +AG  ++A +++  M D+G  PD  ++  L+  LC A +++ A  
Sbjct: 259 RPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKE 318

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           ++  +  N    +  ++  ++D+  + G      + + +   + Y  DVV++T+ +  L 
Sbjct: 319 LFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLC 378

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
           +    +EA+  +  M+   + PN +TY  ++    +   I+   +LL  +    ++   +
Sbjct: 379 KARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAY 438

Query: 569 TSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           T      +  K   +  AV    +M   G++P+
Sbjct: 439 TYNIFIDYFGKSGETGKAVETFEKMKAKGIVPN 471


>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 123/477 (25%), Positives = 226/477 (47%), Gaps = 34/477 (7%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVM------DVLFKI 167
           GC      F   +  Y R   Y    +   +M   G+ P     NI++      + L  +
Sbjct: 6   GCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSM 65

Query: 168 GRVDLGIKVLKETQLPNFLSFNIALCN----LCKLNDVSNVKDVIGMMVRKGFYPNVRMF 223
             + L  +   E      +   + +CN    LC +       +VI  M+ KGF P+   +
Sbjct: 66  EVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTY 125

Query: 224 EILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQ 283
             ++   C   ++ +A+QL   M   G +  V  +T L+D F ++  ++ A   +++M Q
Sbjct: 126 SKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQ 185

Query: 284 NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD- 342
           +GC+PNVVTYT+LI  +++ +  S A    +M+ S G  P++V +  LID   K G  + 
Sbjct: 186 DGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEK 245

Query: 343 ----------DALDVYDGLLELKLV------PDSYTFCSLLSTVCLSGRFSLLPKLVCGL 386
                     D +D+ D  +  ++V      P+  T+ +L+  +C + +      L+  +
Sbjct: 246 ACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETM 305

Query: 387 EVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
            +E    + ++Y+AL+  FCK G  ++A +++  ML  G +P+ Y++  L+  L   +++
Sbjct: 306 SLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRL 365

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK--YPLDVVSYT 501
           D A+ V   ++ N+ A N  ++T +VD L + G+  +A +L    + EK  YP +VV+YT
Sbjct: 366 DLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLM-LMMEEKGCYP-NVVTYT 423

Query: 502 VAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
             I G  + GR +    L   M      PN  TYRV++   C    +    +LL+++
Sbjct: 424 AMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEM 480



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 107/460 (23%), Positives = 198/460 (43%), Gaps = 59/460 (12%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV ++  ++    ++ G  E  R    E+ + GC     T+   +  Y +        E 
Sbjct: 156 DVYTYTTLLDRFCKV-GLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEI 214

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGR--------------------VDLGIKVL-KET 180
           F+ M   G  PN      ++D   K G                     VD+  +++  E 
Sbjct: 215 FEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSEL 274

Query: 181 QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAY 240
           + PN +++   +  LCK + V   +D++  M  +G  PN  +++ L++ FCK+G++ EA 
Sbjct: 275 KEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQ 334

Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
           ++   M+  G S +V  ++ LID   + +RLD+A  +  KM++N C+PNVV YT ++ G 
Sbjct: 335 EVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGL 394

Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
            +      A+  + M+E +G  P++V +  +ID   K G  D  L++   +      P+ 
Sbjct: 395 CKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNF 454

Query: 361 YTFCSLLSTVCLSG-------------------RFSLLPKLVCGL------------EVE 389
            T+  L++  C +G                      +  K++ G             E+ 
Sbjct: 455 ITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSHEFVASLGLLAELS 514

Query: 390 AD-----LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
            D     L VY  L+  F KAG    A++L+  +        N ++V L+  L  A K+D
Sbjct: 515 EDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQN-TYVSLIESLTLACKVD 573

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           +A  +Y  +          +   ++  L+  G+  +A+QL
Sbjct: 574 KAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQL 613



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/471 (21%), Positives = 200/471 (42%), Gaps = 33/471 (7%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G+FE    ++ E+   G +  + T+   +             + F EM R G TP+ +  
Sbjct: 101 GKFEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTY 160

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
             ++D   K+G ++       E Q     PN +++   +    K   +S   ++  MM+ 
Sbjct: 161 TTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLS 220

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL-SVNAWTVLIDGFRRLRRLD 272
            G  PN+  +  L++  CK G   +A Q+   M      +  V+ +  ++D   +     
Sbjct: 221 NGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELK----- 275

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
                          PNVVTY +L+ G  +A     A   L+ +  EG  P+ + ++ LI
Sbjct: 276 --------------EPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALI 321

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVE 389
           D   K+G  D+A +V+  +L     P+ YT+ SL+  +    R  L  K++  +      
Sbjct: 322 DGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCA 381

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            ++V+Y  ++   CK G  ++A +L   M +KG  P+  ++  ++ G   A ++D  + +
Sbjct: 382 PNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLEL 441

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
            Q +     A N   +  +++    AG    A +L        +P  +  Y    R ++E
Sbjct: 442 LQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMY----RKVIE 497

Query: 510 GGRTE--EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           G   E   +  L +++      P    Y++++ +F K   ++M   L +++
Sbjct: 498 GFSHEFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEEL 548



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/443 (20%), Positives = 183/443 (41%), Gaps = 42/443 (9%)

Query: 210 MMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG----- 264
           MM+ +G YP+  +F  L++ +C+ G    AY+LL  M+  G       + +LI G     
Sbjct: 1   MMITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTE 60

Query: 265 -FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP 323
               +  + +A   + +M++ G   N V   +  +       F  A++ +  + S+G  P
Sbjct: 61  DLPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIP 120

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV 383
           D   ++ +I  L      + A  ++  +    + PD YT+ +LL   C  G         
Sbjct: 121 DSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWF 180

Query: 384 CGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
             ++ +    ++V Y AL+  + K    ++A +++  ML  G  P+  ++  L+ G C A
Sbjct: 181 DEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKA 240

Query: 441 RKIDEAINVYQGIVMNNPAV-------------------NAHVHTAIVDRLIEAGRCHKA 481
            + ++A  +Y    M N  V                   N   + A+VD L +A +  +A
Sbjct: 241 GETEKACQIYAR--MKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEA 298

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
             L     +E    + + Y   I G  + G+ +EA  ++++M      PN YTY  ++  
Sbjct: 299 RDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDK 358

Query: 542 FCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
             K++ + +  ++L  +++     +      +   + K   +  A   ++ M   G  P+
Sbjct: 359 LFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPN 418

Query: 602 EMWRKLGLLSDETMTPVSLFDGF 624
                        +T  ++ DGF
Sbjct: 419 ------------VVTYTAMIDGF 429



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 64/308 (20%), Positives = 127/308 (41%), Gaps = 39/308 (12%)

Query: 86  FDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEM 145
           +D +I    ++ G+ +  + +  ++   GC     T+   +   ++ +   + L+   +M
Sbjct: 317 YDALIDGFCKV-GKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKM 375

Query: 146 GRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCKLNDV 201
                 PN      ++D L K+G+ D   +++    ++   PN +++   +    K   V
Sbjct: 376 LENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRV 435

Query: 202 SNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL------------------ 243
               +++ +M  KG  PN   + +L+N  C  G + +A++LL                  
Sbjct: 436 DRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKV 495

Query: 244 ------------GLMITLGTSLSVN---AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSP 288
                       GL+  L    SV     + +LID F +  RL+MA  L E++     + 
Sbjct: 496 IEGFSHEFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAY 555

Query: 289 NVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVY 348
              TY SLI+    A     AF     +   G  P+L     LI  L ++G +++AL + 
Sbjct: 556 QN-TYVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQLS 614

Query: 349 DGLLELKL 356
           D + ++ +
Sbjct: 615 DSICQMDI 622


>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1136

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 138/599 (23%), Positives = 245/599 (40%), Gaps = 63/599 (10%)

Query: 65  IALSFFIWCAKQRDYFHD---------------VQSFD---HMISVVTRLTGRFETVRGI 106
           +AL F  W  KQ     D                + +D   H++  ++ ++G+   V G 
Sbjct: 92  LALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFGA 151

Query: 107 VGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK 166
           +    R+ C      + + +R+Y R  M    LE F  MG +GF P+ +  N ++  + K
Sbjct: 152 LMTTYRL-CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVK 210

Query: 167 IGRVDLGI-----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
            G  D+ +     ++LK    P+  +FNI +  LC          ++  M + G+ P + 
Sbjct: 211 SGE-DVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIV 269

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            +  +L+ +CK GR   A +LL  M + G    V  + +LI    R  R+     L   M
Sbjct: 270 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 329

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
            +    PN VTY +LI GF       IA   L+ + S G +P+ V  N LID     G++
Sbjct: 330 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 389

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNAL 398
            +AL ++  +    L P   ++  LL  +C +  F L       ++   V    + Y  +
Sbjct: 390 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 449

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK---------------- 442
           +   CK GF ++AV L N M   G  PD  ++  L+ G C   +                
Sbjct: 450 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 509

Query: 443 -------------------IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
                              + EAI +Y+ +++     +      +V  L +AG+  +A +
Sbjct: 510 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE 569

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
             R    +    + VS+   I G    G   +A+ ++ +M  +   P  +TY  +L   C
Sbjct: 570 FMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLC 629

Query: 544 KERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
           K  +++  ++ L+ +      +D      L   + K  + + AV+   EM    ++PD 
Sbjct: 630 KGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS 688



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 113/463 (24%), Positives = 190/463 (41%), Gaps = 43/463 (9%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNL 195
           +  +EM  FG +PN    N ++D     G     +K+    +     P+ +S+ + L  L
Sbjct: 359 QLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGL 418

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
           CK  +    +     M R G       +  +++  CK G + EA  LL  M   G    +
Sbjct: 419 CKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDI 478

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
             ++ LI+GF ++ R   A  +  ++ + G SPN + Y++LI           A    + 
Sbjct: 479 VTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEA 538

Query: 316 LESEGHAPDLVFHNVLIDCLSKMG----------------------SYD----------- 342
           +  EGH  D    NVL+  L K G                      S+D           
Sbjct: 539 MILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGE 598

Query: 343 --DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNA 397
              A  V+D + ++   P  +T+ SLL  +C  G      K +  L       D V+YN 
Sbjct: 599 GLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNT 658

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI-NVYQGIVMN 456
           LL+  CK+G   +AV L+  M+ +   PD+Y++  L+ GLC   K   AI    +     
Sbjct: 659 LLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARG 718

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
           N   N  ++T  VD + +AG+    I    +     +  D+V+    I G    G+ E+ 
Sbjct: 719 NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKT 778

Query: 517 YILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
             L  +M +    PN  TY ++L  + K +++     L + +I
Sbjct: 779 NDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSII 821



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 109/477 (22%), Positives = 183/477 (38%), Gaps = 80/477 (16%)

Query: 142  FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ-LP---NFLSFNIALCNLCK 197
            FDEM + G  P  F    ++  L K G +    K LK    +P   + + +N  L  +CK
Sbjct: 606  FDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCK 665

Query: 198  LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              +++    + G MV++   P+   +  L++  C+ G+   A          G  L    
Sbjct: 666  SGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKV 725

Query: 258  -WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
             +T  +DG  +  +     Y  E+M   G +P++VT  ++I G+            L  +
Sbjct: 726  MYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEM 785

Query: 317  ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
             ++   P+L  +N+L+   SK      +  +Y  ++   ++PD  T  SL+  +C S   
Sbjct: 786  GNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNML 845

Query: 377  SL----LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM------LDK----- 421
             +    L   +C   VE D   +N L+S  C  G  N A  L   M      LDK     
Sbjct: 846  EIGLKILKAFIC-RGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDA 904

Query: 422  ------------------------GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
                                    G +P++  ++GL+ GLC    I  A  V + ++ + 
Sbjct: 905  MVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHK 964

Query: 458  PAVNAHVHTAIVDRLIEAGRCHKAIQLFR------------------------------- 486
                    +A+V  L + G+  +A  L R                               
Sbjct: 965  ICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEAL 1024

Query: 487  --RAIVEK--YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
              R ++      LD+VSY V I GL   G    A+ LY +MK      NA TY+ ++
Sbjct: 1025 ELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALI 1081



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 105/497 (21%), Positives = 206/497 (41%), Gaps = 23/497 (4%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D+ ++  +I+   ++ GRF+T + IV  + RVG       +   +    R       +  
Sbjct: 477 DIVTYSALINGFCKV-GRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRI 535

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCK 197
           ++ M   G T + F  N+++  L K G+V    + ++    +  LPN +SF+      C 
Sbjct: 536 YEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFD------CL 589

Query: 198 LNDVSNVKD------VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           +N   N  +      V   M + G +P    +  LL   CK G + EA + L  +  +  
Sbjct: 590 INGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPA 649

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
           ++    +  L+    +   L  A  L+ +MVQ    P+  TYTSLI G        IA  
Sbjct: 650 AVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAIL 709

Query: 312 FLDMLESEGHA-PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
           F    E+ G+  P+ V +   +D + K G +   +   + +  L   PD  T  +++   
Sbjct: 710 FAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGY 769

Query: 371 CLSGRFS----LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
              G+      LLP++        +L  YN LL  + K    + +  LY +++  G  PD
Sbjct: 770 SRMGKIEKTNDLLPEM-GNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPD 828

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
             +   L+ G+C +  ++  + + +  +     V+ +    ++ +    G  + A  L +
Sbjct: 829 KLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVK 888

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
                   LD  +    +  L    R +E+ ++  +M    + P +  Y  ++   C+  
Sbjct: 889 VMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVG 948

Query: 547 NIKMVKRLLQDVIDARI 563
           +IK    + +++I  +I
Sbjct: 949 DIKTAFVVKEEMIAHKI 965



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 146/339 (43%), Gaps = 46/339 (13%)

Query: 143  DEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKL 198
            ++M   G TP+    N ++D   ++G++    DL  ++  +   PN  ++NI L    K 
Sbjct: 748  EQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKR 807

Query: 199  NDVSN-------------VKDV-----------------IGMMVRKGFY-----PNVRMF 223
             DVS              + D                  IG+ + K F       +   F
Sbjct: 808  KDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTF 867

Query: 224  EILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQ 283
             +L++  C  G I  A+ L+ +M +LG SL  +    ++    R  R   +  +  +M +
Sbjct: 868  NMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSK 927

Query: 284  NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
             G SP    Y  LI G         AF   + + +    P  V  + ++  L+K G  D+
Sbjct: 928  QGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADE 987

Query: 344  ALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF--SLLPKLV---CGLEVEADLVVYNAL 398
            A  +   +L++KLVP   +F +L+   C +G    +L  ++V   CGL++  DLV YN L
Sbjct: 988  ATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKL--DLVSYNVL 1045

Query: 399  LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
            ++  C  G    A +LY  M   GF  +  ++  L+RGL
Sbjct: 1046 ITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1084



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 101/238 (42%), Gaps = 41/238 (17%)

Query: 82   DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
            D  + D M+SV+ R   RF+  R ++ E+++ G   +++ ++  +    R    G +  A
Sbjct: 898  DKDTCDAMVSVLNR-NHRFQESRMVLHEMSKQGISPESRKYIGLINGLCR---VGDIKTA 953

Query: 142  F---DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKL 198
            F   +EM      P   A + ++  L K G+ D    +L+                    
Sbjct: 954  FVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLR-------------------- 993

Query: 199  NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
                        M++    P +  F  L++  CK G + EA +L  +M   G  L + ++
Sbjct: 994  -----------FMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSY 1042

Query: 259  TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
             VLI G      + +A  L+E+M  +G   N  TY +LI+G +  +    AFS  D++
Sbjct: 1043 NVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARE---TAFSGADII 1097


>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
 gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
          Length = 655

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/510 (22%), Positives = 225/510 (44%), Gaps = 38/510 (7%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR      ++ E+ R GC      + + L    RG  +   +   +++   G   +    
Sbjct: 136 GRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNC 195

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N+V++ +   G VD  + +L++       P+ +S+N  L  LC       V++++  MVR
Sbjct: 196 NLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVR 255

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
               PN+  F  L++  C+ G     +++L  M   G +  +  +  +IDG  +   L +
Sbjct: 256 MACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKV 315

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL-DMLESEGHAPDLVFHNVLI 332
           A  +  +M   G  PNVV Y +L+KG   A+ +      L +M + +    D+ F N+L+
Sbjct: 316 AHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTF-NILV 374

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADL 392
           D   + G  D  +++ + +L    +PD                                +
Sbjct: 375 DFFCQNGLVDRVIELLEQMLVHGCMPD--------------------------------V 402

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           + Y  +++ FCK G  ++AV L  +M   G  P+  S+  +L+GLC A +  +A ++   
Sbjct: 403 ITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQ 462

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           ++     +N      +++ L + G   +AI+L ++ +V     D++SY+  I GL + G+
Sbjct: 463 MIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 522

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
           T+EA  L + M +  + PN   Y  +  +  +E  I  V ++  ++ D  I  D      
Sbjct: 523 TDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNA 582

Query: 573 LTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
           +   + K   +  A+  L  M + G +P+E
Sbjct: 583 VISSLCKRGETERAIEFLAYMVSSGCVPNE 612



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/372 (25%), Positives = 181/372 (48%), Gaps = 8/372 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           ++ +F+ +IS + R  G FE V  ++ ++A  GC    + +   +    +     +  E 
Sbjct: 261 NIVTFNTLISYLCR-NGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEI 319

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE---TQLP-NFLSFNIALCNLCK 197
            + M  +G  PN    N ++  L    R +   ++L E      P + ++FNI +   C+
Sbjct: 320 LNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQ 379

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              V  V +++  M+  G  P+V  +  ++N FCK G I EA  LL  M   G   +  +
Sbjct: 380 NGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTIS 439

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T+++ G     R   A  L  +M+Q GC  N +T+ +LI    +  +   A   L  + 
Sbjct: 440 YTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQML 499

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G +PDL+ ++ +ID L K G  D+AL++ + ++   + P++  + S+ S +   GR +
Sbjct: 500 VNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRIN 559

Query: 378 LLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
            + ++   ++   + +D V+YNA++S  CK G   +A++    M+  G  P+  ++  L+
Sbjct: 560 KVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILI 619

Query: 435 RGLCGARKIDEA 446
           RGL     + EA
Sbjct: 620 RGLASEGFVKEA 631



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/288 (19%), Positives = 112/288 (38%), Gaps = 39/288 (13%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           R+E    ++ E+    C +   TF + +  + +  +   V+E  ++M   G  P+     
Sbjct: 347 RWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYT 406

Query: 159 IVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
            V++   K G +D  + +LK        PN +S+ I L  LC      + +D++  M+++
Sbjct: 407 TVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQ 466

Query: 215 GFYPNVRMFEILLNCFCK-----------------------------------MGRIAEA 239
           G   N   F  L+N  CK                                    G+  EA
Sbjct: 467 GCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEA 526

Query: 240 YQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG 299
            +LL +M+  G S +   ++ +     R  R++    +++ +       + V Y ++I  
Sbjct: 527 LELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISS 586

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
             +      A  FL  + S G  P+   + +LI  L+  G   +A ++
Sbjct: 587 LCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEM 634



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/219 (21%), Positives = 91/219 (41%), Gaps = 4/219 (1%)

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           ++  +   GC     ++ + L+     E +    +   +M + G   N    N +++ L 
Sbjct: 424 LLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLC 483

Query: 166 KIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
           K G V+  I++LK+  +    P+ +S++  +  L K        +++ +MV KG  PN  
Sbjct: 484 KKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTI 543

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
           ++  + +   + GRI +  Q+   +           +  +I    +    + A      M
Sbjct: 544 IYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYM 603

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           V +GC PN  TYT LI+G         A   L  L S+G
Sbjct: 604 VSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/237 (19%), Positives = 100/237 (42%), Gaps = 3/237 (1%)

Query: 365 SLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
           SL+ ++C +GR +   + +      A +V YNA+++ +C+AG    A +L   +      
Sbjct: 63  SLIRSLCAAGRTAEAARALSAAGGGAGVVAYNAMVAGYCRAGQLESARRLAAAV---PVP 119

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           P+ Y++  ++R LC   +I +A+ V   +     A    ++  I++     G    A+++
Sbjct: 120 PNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRV 179

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
                     LDV +  + +  + + G  ++A  L   +      P+  +Y  +L   C 
Sbjct: 180 LEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCM 239

Query: 545 ERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            +    V+ L+++++      +  T   L  ++ +          L +M   G  PD
Sbjct: 240 AKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPD 296


>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 142/598 (23%), Positives = 249/598 (41%), Gaps = 63/598 (10%)

Query: 65  IALSFFIWCAKQR--DYFHDVQ-------------SFD---HMISVVTRLTGRFETVRGI 106
           +AL F  W  KQ   +  H VQ              +D   H++  ++ ++G+   V G 
Sbjct: 52  LALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFGA 111

Query: 107 VGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK 166
           +    R+ C      + + +R+Y R  M    LE F  MG +GF P+ +  N ++  + K
Sbjct: 112 LMTTYRL-CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVK 170

Query: 167 IGRVDLGI-----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
            G  D+ +     ++LK    P+  +FNI +  LC          ++  M + G+ P + 
Sbjct: 171 SGE-DVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIV 229

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            +  +L+ +CK GR   A +LL  M + G    V  + +LI    R  R+     L   M
Sbjct: 230 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 289

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
            +    PN VTY +LI GF       IA   L+ + S G +P+ V  N LID     G++
Sbjct: 290 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 349

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNAL 398
            +AL ++  +    L P   ++  LL  +C +  F L       ++   V    + Y  +
Sbjct: 350 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 409

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG------ARKI--------- 443
           +   CK GF ++AV L N M   G  PD  ++  L+ G C       A++I         
Sbjct: 410 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 469

Query: 444 --------------------DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
                                EAI +Y+ +++     +      +V  L +AG+  +A +
Sbjct: 470 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE 529

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
             R    +    + VS+   I G    G   +A+ ++ +M  +   P  +TY  +L   C
Sbjct: 530 FMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLC 589

Query: 544 KERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           K  +++  ++ L+ +      +D      L   + K  + + AV+   EM    ++PD
Sbjct: 590 KGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPD 647



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 128/547 (23%), Positives = 217/547 (39%), Gaps = 61/547 (11%)

Query: 72  WCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLR---I 128
           W  K+  +   ++  DHM S    +     T   ++ +L R   + K    L  +R   I
Sbjct: 237 WYCKKGRFKAAIELLDHMKS--KGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMI 294

Query: 129 YWRGEMYGMVLEAF-------------DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIK 175
           +     Y  ++  F             +EM  FG +PN    N ++D     G     +K
Sbjct: 295 HPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALK 354

Query: 176 VLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFC 231
           +    +     P+ +S+ + L  LCK  +    +     M R G       +  +++  C
Sbjct: 355 MFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLC 414

Query: 232 KMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVV 291
           K G + EA  LL  M   G    +  ++ LI+GF ++ R   A  +  ++ + G SPN +
Sbjct: 415 KNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGI 474

Query: 292 TYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG------------ 339
            Y++LI           A    + +  EGH  D    NVL+  L K G            
Sbjct: 475 IYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCM 534

Query: 340 ----------SYD-------------DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
                     S+D              A  V+D + ++   P  +T+ SLL  +C  G  
Sbjct: 535 TSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHL 594

Query: 377 SLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
               K +  L       D V+YN LL+  CK+G   +AV L+  M+ +   PD+Y++  L
Sbjct: 595 REAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSL 654

Query: 434 LRGLCGARKIDEAI-NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           + GLC   K   AI    +     N   N  ++T  VD + +AG+    I    +     
Sbjct: 655 ISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLG 714

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVK 552
           +  D+V+    I G    G+ E+   L  +M +    PN  TY ++L  + K +++    
Sbjct: 715 HTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSF 774

Query: 553 RLLQDVI 559
            L + +I
Sbjct: 775 LLYRSII 781



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 109/477 (22%), Positives = 183/477 (38%), Gaps = 80/477 (16%)

Query: 142  FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ-LP---NFLSFNIALCNLCK 197
            FDEM + G  P  F    ++  L K G +    K LK    +P   + + +N  L  +CK
Sbjct: 566  FDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCK 625

Query: 198  LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              +++    + G MV++   P+   +  L++  C+ G+   A          G  L    
Sbjct: 626  SGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKV 685

Query: 258  -WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
             +T  +DG  +  +     Y  E+M   G +P++VT  ++I G+            L  +
Sbjct: 686  MYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEM 745

Query: 317  ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
             ++   P+L  +N+L+   SK      +  +Y  ++   ++PD  T  SL+  +C S   
Sbjct: 746  GNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNML 805

Query: 377  SL----LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM------LDK----- 421
             +    L   +C   VE D   +N L+S  C  G  N A  L   M      LDK     
Sbjct: 806  EIGLKILKAFIC-RGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDA 864

Query: 422  ------------------------GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
                                    G +P++  ++GL+ GLC    I  A  V + ++ + 
Sbjct: 865  MVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHK 924

Query: 458  PAVNAHVHTAIVDRLIEAGRCHKAIQLFR------------------------------- 486
                    +A+V  L + G+  +A  L R                               
Sbjct: 925  ICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEAL 984

Query: 487  --RAIVEK--YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
              R ++      LD+VSY V I GL   G    A+ LY +MK      NA TY+ ++
Sbjct: 985  ELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALI 1041



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 105/497 (21%), Positives = 206/497 (41%), Gaps = 23/497 (4%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D+ ++  +I+   ++ GRF+T + IV  + RVG       +   +    R       +  
Sbjct: 437 DIVTYSALINGFCKV-GRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRI 495

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCK 197
           ++ M   G T + F  N+++  L K G+V    + ++    +  LPN +SF+      C 
Sbjct: 496 YEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFD------CL 549

Query: 198 LNDVSNVKD------VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           +N   N  +      V   M + G +P    +  LL   CK G + EA + L  +  +  
Sbjct: 550 INGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPA 609

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
           ++    +  L+    +   L  A  L+ +MVQ    P+  TYTSLI G        IA  
Sbjct: 610 AVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAIL 669

Query: 312 FLDMLESEGHA-PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
           F    E+ G+  P+ V +   +D + K G +   +   + +  L   PD  T  +++   
Sbjct: 670 FAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGY 729

Query: 371 CLSGRFS----LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
              G+      LLP++        +L  YN LL  + K    + +  LY +++  G  PD
Sbjct: 730 SRMGKIEKTNDLLPEM-GNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPD 788

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
             +   L+ G+C +  ++  + + +  +     V+ +    ++ +    G  + A  L +
Sbjct: 789 KLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVK 848

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
                   LD  +    +  L    R +E+ ++  +M    + P +  Y  ++   C+  
Sbjct: 849 VMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVG 908

Query: 547 NIKMVKRLLQDVIDARI 563
           +IK    + +++I  +I
Sbjct: 909 DIKTAFVVKEEMIAHKI 925



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 85/339 (25%), Positives = 144/339 (42%), Gaps = 46/339 (13%)

Query: 143  DEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKL 198
            ++M   G TP+    N ++D   ++G++    DL  ++  +   PN  ++NI L    K 
Sbjct: 708  EQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKR 767

Query: 199  NDVSNVKDVIGMMVRKGFYPN-------------VRMFEI-------------------- 225
             DVS    +   ++  G  P+               M EI                    
Sbjct: 768  KDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTF 827

Query: 226  --LLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQ 283
              L++  C  G I  A+ L+ +M +LG SL  +    ++    R  R   +  +  +M +
Sbjct: 828  NMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSK 887

Query: 284  NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
             G SP    Y  LI G         AF   + + +    P  V  + ++  L+K G  D+
Sbjct: 888  QGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADE 947

Query: 344  ALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF--SLLPKLV---CGLEVEADLVVYNAL 398
            A  +   +L++KLVP   +F +L+   C +G    +L  ++V   CGL++  DLV YN L
Sbjct: 948  ATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKL--DLVSYNVL 1005

Query: 399  LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
            ++  C  G    A +LY  M   GF  +  ++  L+RGL
Sbjct: 1006 ITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1044



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 101/238 (42%), Gaps = 41/238 (17%)

Query: 82   DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
            D  + D M+SV+ R   RF+  R ++ E+++ G   +++ ++  +    R    G +  A
Sbjct: 858  DKDTCDAMVSVLNR-NHRFQESRMVLHEMSKQGISPESRKYIGLINGLCR---VGDIKTA 913

Query: 142  F---DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKL 198
            F   +EM      P   A + ++  L K G+ D    +L+                    
Sbjct: 914  FVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLR-------------------- 953

Query: 199  NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
                        M++    P +  F  L++  CK G + EA +L  +M   G  L + ++
Sbjct: 954  -----------FMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSY 1002

Query: 259  TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
             VLI G      + +A  L+E+M  +G   N  TY +LI+G +  +    AFS  D++
Sbjct: 1003 NVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARE---TAFSGADII 1057


>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 864

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 147/606 (24%), Positives = 270/606 (44%), Gaps = 69/606 (11%)

Query: 2   LWRCKRS--LFYTAQRTQILKTIIS---FKSIHQI--SSPKVCATTHQDFPIILAP---- 50
           +W CK S   F   Q+ Q+LK I+S   F+  H +  +  + C+   ++   +++     
Sbjct: 91  MWVCKHSSYCFDPTQKNQLLKLIVSSGLFRVAHDVIVALIRECSRCEKEMLKLISCFDEL 150

Query: 51  HIVHSTLLNCPS-----------DLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRL--T 97
             V    LN P            DL  L++  +   + D F  V   D+  ++V  L   
Sbjct: 151 REVSGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFV-VGMIDYR-TIVNALCKN 208

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G  E     + ++ +VG ++ +      L  + RG      L+ FD M R G        
Sbjct: 209 GYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREG-------- 260

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNI---ALCNLCKLNDVSNVKDVIGMMVRK 214
                                 T  PN +S++I    LC + +L +   +KD +G    K
Sbjct: 261 ----------------------TCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMG---EK 295

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           G  P+ R + +L+   C  G I +A+ L   MI  G   +V+ +TVLIDG  R  +++ A
Sbjct: 296 GCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEA 355

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             +  KMV++G  P+V+TY +LI G+ +      AF  L ++E     P++   N L++ 
Sbjct: 356 NGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEG 415

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEAD 391
           L ++G    A+ +   +L+  L PD  ++  L+  +C  G  ++  KL+  +   ++E D
Sbjct: 416 LCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPD 475

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
            + + A+++ FCK G  + A      ML KG + D  +   L+ G+C   K  +A+ + +
Sbjct: 476 CLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILE 535

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL--DVVSYTVAIRGLLE 509
            +V        H    I+D L +  +  + + +  +  + K  L   VV+YT  + GL+ 
Sbjct: 536 TLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGK--INKLGLVPSVVTYTTLVDGLIR 593

Query: 510 GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
            G    ++ +   MK     PN Y Y +++   C+   ++  ++LL  + D+ +  ++ T
Sbjct: 594 SGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVT 653

Query: 570 SIRLTK 575
              + K
Sbjct: 654 YTVMVK 659



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 112/473 (23%), Positives = 224/473 (47%), Gaps = 13/473 (2%)

Query: 47  ILAPHIVHSTLLNCPSDL---IALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETV 103
           +L  HIV S LL     L    AL  F   +++     +  S+  +I  +  + GR E  
Sbjct: 227 LLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEV-GRLEEA 285

Query: 104 RGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDV 163
            G+  ++   GC    +T+ + ++      +       FDEM   G  PN     +++D 
Sbjct: 286 FGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDG 345

Query: 164 LFKIGRVDL--GI--KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN 219
           L + G+++   G+  K++K+   P+ +++N  +   CK   V    +++ +M ++   PN
Sbjct: 346 LCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPN 405

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
           VR F  L+   C++G+  +A  LL  M+  G S  + ++ VLIDG  R   +++A  L  
Sbjct: 406 VRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLT 465

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
            M      P+ +T+T++I  F +     +A +FL ++  +G + D V    LID +  +G
Sbjct: 466 SMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVG 525

Query: 340 SYDDALDVYDGLLELKLVPDSYTF---CSLLSTVC-LSGRFSLLPKLVCGLEVEADLVVY 395
              DAL + + L++++++   ++      +LS  C L    ++L K +  L +   +V Y
Sbjct: 526 KTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGK-INKLGLVPSVVTY 584

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
             L+    ++G  + + ++   M   G  P+ Y +  ++ GLC   +++EA  +   +  
Sbjct: 585 TTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQD 644

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           +  + N   +T +V   +  G+  +A++  R  +   Y L+   Y+  +RG +
Sbjct: 645 SGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFV 697



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 82/333 (24%), Positives = 143/333 (42%), Gaps = 49/333 (14%)

Query: 294 TSLIKGFMEAKMFSIAFSFLDMLESEGH-APDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
           TSL+ GF        A    D++  EG  AP+ V +++LI  L ++G  ++A  + D + 
Sbjct: 234 TSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMG 293

Query: 353 ELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAV 412
           E    P + T                                Y  L+   C  G  ++A 
Sbjct: 294 EKGCQPSTRT--------------------------------YTVLIKALCDRGLIDKAF 321

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
            L++ M+ +G  P+ +++  L+ GLC   KI+EA  V + +V +    +   + A+++  
Sbjct: 322 NLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGY 381

Query: 473 IEAGRCHKAIQLFRRAIVEKYPL--DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
            + GR   A +L    ++EK     +V ++   + GL   G+  +A  L  +M    + P
Sbjct: 382 CKDGRVVPAFELL--TVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSP 439

Query: 531 NAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQL 590
           +  +Y V++   C+E ++ +  +LL  +    +E D  T    T  I  F     A    
Sbjct: 440 DIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLT---FTAIINAFCKQGKAD--- 493

Query: 591 VEMCNLGLIPDEMWRKLGLLSDETMTPVSLFDG 623
           V    LGL    M RK G+  DE +T  +L DG
Sbjct: 494 VASAFLGL----MLRK-GISLDE-VTGTTLIDG 520



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 89/427 (20%), Positives = 160/427 (37%), Gaps = 81/427 (18%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNV 204
           G +P+  + N+++D L + G +++  K+L         P+ L+F   +   CK       
Sbjct: 436 GLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVA 495

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGR----------------------------- 235
              +G+M+RKG   +      L++  C +G+                             
Sbjct: 496 SAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDM 555

Query: 236 ------IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
                 + E   +LG +  LG   SV  +T L+DG  R   +  +  + E M  +GC PN
Sbjct: 556 LSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPN 615

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
           V  YT +I G  +      A   L  ++  G +P+ V + V++      G  D AL+   
Sbjct: 616 VYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVR 675

Query: 350 GLLELKLVPDSYTFCSLLSTVCLSGR-------------FSLLPKL------VC------ 384
            ++E     +   + SLL    LS +              S++ +L      +C      
Sbjct: 676 AMVERGYELNDRIYSSLLRGFVLSQKGIRETDPECIKELISVVEQLGGSTSGLCIFLVTR 735

Query: 385 ----GLEVEADLVVYNAL-------------LSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
               G   E++ +V   L             +  +C      + V+L   +L  GF P  
Sbjct: 736 LCKEGRTDESNGLVQTILKSGVFLEKAIDIIMESYCSKKKHTKCVELITLVLKSGFVPSF 795

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
            SF  +++GL      + A  +   ++ +N  V        V+ L+E G C + I L  +
Sbjct: 796 KSFCLVIQGLKKEGDTERARELVMELLTSNGVVEKSGVLPYVECLMETGDCSEVIDLVDQ 855

Query: 488 AIVEKYP 494
               + P
Sbjct: 856 LHSRERP 862


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 117/474 (24%), Positives = 214/474 (45%), Gaps = 42/474 (8%)

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNI 190
           Y   +  F +M   G  P+ F  NI+++    +G++        K+LK    PN ++ N 
Sbjct: 26  YPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNT 85

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +  LC   +V         +V +GF  +   +  LLN  CK+G    A +LL ++    
Sbjct: 86  LMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRS 145

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
           T  +V  +  +IDG  + + ++ A  L+ +M   G  PNV+TY++LI GF  A     AF
Sbjct: 146 TRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAF 205

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
             L+         +++  N+                           P+ YT+  L+  +
Sbjct: 206 GLLN---------EMILKNI--------------------------NPNVYTYTILMDAL 230

Query: 371 CLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           C  G+      L+  +    V+ ++V YN L+  +C  G    A ++++TM+ KG  P+ 
Sbjct: 231 CKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNV 290

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
           YS+  ++  LC ++++DEA+N+ + ++  N   N   +++++D   + GR   A+ L + 
Sbjct: 291 YSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKE 350

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN 547
                 P DVV+YT  +  L +    ++A  L+ +MK   + PN YTY  ++   CK   
Sbjct: 351 MYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGR 410

Query: 548 IKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            K  ++L Q ++     ++  T   +   + K      A+    +M   G IPD
Sbjct: 411 HKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPD 464



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 114/421 (27%), Positives = 209/421 (49%), Gaps = 9/421 (2%)

Query: 147 RFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVS 202
           + G+ PNT   N +M  L   G V   +    KV+ +    + +S+   L  LCK+ +  
Sbjct: 73  KLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETR 132

Query: 203 NVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLI 262
           +   ++ M+  +   PNV M+  +++  CK   + EAY L   M   G   +V  ++ LI
Sbjct: 133 SALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLI 192

Query: 263 DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
            GF    +L  A  L  +M+    +PNV TYT L+    +      A + L ++  EG  
Sbjct: 193 YGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVK 252

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL---L 379
           P++V +N L+D    +G   +A  ++  +++  + P+ Y++  ++  +C S R      L
Sbjct: 253 PNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNL 312

Query: 380 PKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
            + V    +  + V Y++L+  FCK G    A+ L   M  +G   D  ++  LL  LC 
Sbjct: 313 LREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCK 372

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
            + +D+A  ++  +       N + +TA++D L + GR   A +LF+  +V+   ++V +
Sbjct: 373 NQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWT 432

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS-FCKERNIKMVKRLLQDV 558
           Y V I GL + G  +EA  + S+M+     P+A T+ +++ S F K++N K  ++LL ++
Sbjct: 433 YNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDK-AEKLLHEM 491

Query: 559 I 559
           I
Sbjct: 492 I 492



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 89/320 (27%), Positives = 159/320 (49%), Gaps = 10/320 (3%)

Query: 137 MVLEAFD---EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFN 189
           +V EA+D   EM   G  PN    + ++      G++     +L E  L    PN  ++ 
Sbjct: 165 LVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYT 224

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
           I +  LCK   V   K+++ +M ++G  PNV  +  L++ +C +G +  A Q+   M+  
Sbjct: 225 ILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQK 284

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           G + +V ++ ++ID   + +R+D A  L  +++     PN VTY+SLI GF +    + A
Sbjct: 285 GVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSA 344

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
              L  +   G   D+V +  L+D L K  + D A  ++  + E  + P+ YT+ +L+  
Sbjct: 345 LDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDG 404

Query: 370 VCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
           +C  GR     KL   L V+    ++  YN ++S  CK G  ++A+ + + M + G  PD
Sbjct: 405 LCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPD 464

Query: 427 NYSFVGLLRGLCGARKIDEA 446
             +F  ++R L    + D+A
Sbjct: 465 AVTFEIIIRSLFEKDQNDKA 484



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/395 (25%), Positives = 176/395 (44%), Gaps = 42/395 (10%)

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCN 194
           L   D++   GF  +  +   +++ L KIG     +K+L+     +  PN + +N  +  
Sbjct: 100 LHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDG 159

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           LCK   V+   D+   M  +G +PNV  +  L+  FC  G++ EA+ LL  MI    + +
Sbjct: 160 LCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPN 219

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           V  +T+L+D   +  ++  A  L   M + G  PNVV+Y +L+ G+        A     
Sbjct: 220 VYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFH 279

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            +  +G  P++  +N++ID L K    D+A+++   +L   +VP++ T+ SL+   C  G
Sbjct: 280 TMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLG 339

Query: 375 RFSL---LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
           R +    L K +      AD+V Y +LL   CK    ++A  L+  M ++G  P+ Y++ 
Sbjct: 340 RITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYT 399

Query: 432 GLLRGLC-GAR----------------------------------KIDEAINVYQGIVMN 456
            L+ GLC G R                                   +DEA+ +   +  N
Sbjct: 400 ALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEEN 459

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
               +A     I+  L E  +  KA +L    I +
Sbjct: 460 GCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAK 494



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 107/462 (23%), Positives = 186/462 (40%), Gaps = 47/462 (10%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P  + FN  + +L K+        +   M  KG  P++    IL+NCFC +G++  ++ +
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           LG ++ LG   +      L+ G      +  + +  +K+V  G   + V+Y +L+ G  +
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
                 A   L M+E     P++V +N +ID L K    ++A D+Y  +    + P+   
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPN--- 184

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
                                        ++ Y+ L+  FC AG   +A  L N M+ K 
Sbjct: 185 -----------------------------VITYSTLIYGFCLAGQLMEAFGLLNEMILKN 215

Query: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI 482
             P+ Y++  L+  LC   K+ EA N+   +       N   +  ++D     G    A 
Sbjct: 216 INPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAK 275

Query: 483 QLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
           Q+F   + +    +V SY + I  L +  R +EA  L  ++ H  + PN  TY  ++  F
Sbjct: 276 QMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGF 335

Query: 543 CKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
           CK   I     LL+++       D  T   L   + K  +   A    ++M   G+ P++
Sbjct: 336 CKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNK 395

Query: 603 MWRKLGLLSDETMTPVSLFDGFVPCERRAGNA---NHLLLNG 641
                        T  +L DG     R         HLL+ G
Sbjct: 396 ------------YTYTALIDGLCKGGRHKNAQKLFQHLLVKG 425


>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
 gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
          Length = 764

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/404 (25%), Positives = 192/404 (47%), Gaps = 6/404 (1%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ---LPNFLSFNIALCNLCKLNDVSNVK 205
           G  P+  A N ++  L K G+ D  +++ +E +   +PN  ++NI +  LCK  +V    
Sbjct: 231 GCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAMPNLPTYNIIIGMLCKAGNVEAAF 290

Query: 206 DVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF 265
            V   M   G +PNVR   I+++  CK  ++ EA  +   M     S     +  LIDG 
Sbjct: 291 KVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGL 350

Query: 266 RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL 325
            +  R+D A  ++E+M+     PNVV YTSLI+ F +             +   G +PDL
Sbjct: 351 GKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDL 410

Query: 326 VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCG 385
           +  N  +DC+ K G  +    +++ +     +PD+ ++  L+ ++  +G      +L   
Sbjct: 411 MLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYA 470

Query: 386 LEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
           ++ +    D   YN ++  FCK+G  N+A +L   M   G  P   ++  ++ GL    +
Sbjct: 471 MKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDR 530

Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTV 502
           +DEA  +++    N   +N  ++++++D   + GR  +A  +    + +    +V ++  
Sbjct: 531 LDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNC 590

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
            + GL++     EA + +  MK +   PN  TY +++   CK R
Sbjct: 591 LLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVR 634



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 179/356 (50%), Gaps = 13/356 (3%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           + EM R G +P+    N  MD +FK G  + G  + +E +    LP+  S++I + +L K
Sbjct: 398 YKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVK 457

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
                   ++   M  +G   + R +  +++ FCK G++ +AYQLL  M T+G   +V  
Sbjct: 458 AGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVT 517

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  ++DG  ++ RLD A  L+E+   NG   N V Y+SLI GF +      A+  ++ + 
Sbjct: 518 YGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMM 577

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
            +G  P++   N L+D L K    ++AL  +  + +LK  P+  T+C L++ +C   +F+
Sbjct: 578 QKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFN 637

Query: 378 ---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
              +  + +    ++ + + Y A++S   K+G   QA  L+      G  PD+ S+  ++
Sbjct: 638 KAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMI 697

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
            GL  A +  +A  +++   +   +++     A++D L      HKA  L + AIV
Sbjct: 698 EGLSIANRALDAYQLFEETRLKGCSIHTKTCVALLDAL------HKAECLEQAAIV 747



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 122/563 (21%), Positives = 230/563 (40%), Gaps = 24/563 (4%)

Query: 61  PSDLIALSFFIWCAKQR---DYFHDVQSFDHM-----ISVVTRLTGRFETVR------GI 106
           P++   +     C K R   + F  +Q   H       S  T L G    V        +
Sbjct: 24  PTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRMLAL 83

Query: 107 VGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK 166
             ++  +G  +        +R++ R       L   DEM    F  +    N+ +D   K
Sbjct: 84  FNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGK 143

Query: 167 IGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
           +G+VD+  K   E +    +P+ +++   +  LCK N +    ++   M +    P    
Sbjct: 144 VGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYA 203

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           +  ++  +   G+  EAY LL      G   SV A+  ++    +  + D A  ++E+M 
Sbjct: 204 YNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMK 263

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
           ++   PN+ TY  +I    +A     AF   D ++  G  P++   N++ID L K    D
Sbjct: 264 RDA-MPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLD 322

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNAL 398
           +A  +++G+      PD  TFCSL+  +   GR    + +  +++   ++  ++VVY +L
Sbjct: 323 EACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQI-PNVVVYTSL 381

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           +  F K        K+Y  M+  G +PD       +  +  A + ++   +++ I     
Sbjct: 382 IRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGF 441

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
             +   ++ ++  L++AG   +  +L+     +   LD  +Y   I G  + G+  +AY 
Sbjct: 442 LPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQ 501

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
           L  +MK +   P   TY  ++    K   +     L ++     IEL+      L     
Sbjct: 502 LLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFG 561

Query: 579 KFHSSSSAVNQLVEMCNLGLIPD 601
           K      A   + EM   GL P+
Sbjct: 562 KVGRVDEAYLVMEEMMQKGLTPN 584



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 110/457 (24%), Positives = 195/457 (42%), Gaps = 19/457 (4%)

Query: 204 VKDVIGMMVRKGFYP-NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLI 262
           ++ ++G M   GF P N    E++ +C  K  ++ EA+ LL +M       + +A+T LI
Sbjct: 10  LEQILGEMSIAGFGPTNYTCVELVASCV-KSRKLIEAFDLLQMMRHFKFRPAFSAYTTLI 68

Query: 263 DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
                +   D    L+ +M + G   NV   T+LI+ F        A S LD ++S    
Sbjct: 69  GALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFD 128

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL 382
            D+V +NV IDC  K+G  D A   +  +    LVPD  T+ S++  +C + R     ++
Sbjct: 129 ADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEI 188

Query: 383 VCGLEVEADL---VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
              +E    +     YN ++  +  AG  ++A  L      KG  P   ++  +L  L  
Sbjct: 189 FEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGK 248

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK--YPLDV 497
             K D+A+ +++ +   +   N   +  I+  L +AG    A ++ R A+ E   +P +V
Sbjct: 249 KGKTDKALRIFEEM-KRDAMPNLPTYNIIIGMLCKAGNVEAAFKV-RDAMKEAGLFP-NV 305

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
            +  + I  L +  + +EA  ++  M +    P+  T+  ++    K+  +    R+ + 
Sbjct: 306 RTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYER 365

Query: 558 VIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM----WRKLGLLSDE 613
           ++DA    +      L +  FK            EM   G  PD M    +      + E
Sbjct: 366 MLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGE 425

Query: 614 TMTPVSLFD-----GFVPCERRAGNANHLLLNGGVGR 645
           T    +LF+     GF+P  R      H L+  G  R
Sbjct: 426 TEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFAR 462


>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
          Length = 584

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/401 (26%), Positives = 194/401 (48%), Gaps = 9/401 (2%)

Query: 72  WCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWR 131
           WCA +R    D  + D +I  +    GR      ++ E+ R  CV    T+ + L    +
Sbjct: 150 WCA-ERAVERDAYTCDTLIRGLCG-RGRTANALAVLDEMLRRRCVPDVVTYTILLEATCK 207

Query: 132 GEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLS 187
              Y   ++  DEM   G TP+    N+V++ + + GRVD  I+ LK        PN +S
Sbjct: 208 RSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVS 267

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           +NI L  LC      + ++++G M +KG  PNV  F +L++  C+ G +  A ++L  + 
Sbjct: 268 YNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIP 327

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
             G S +  ++  L+  F + +++D A    + MV  GC P++V+Y +L+     +    
Sbjct: 328 KYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVD 387

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
           +A   L  L+ +G AP L+ +N +ID L+K G   +AL++ + ++   L PD  T+ ++ 
Sbjct: 388 VAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIA 447

Query: 368 STVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
           + +C   R     +    V  + +  + V+YNA++   CK    + A+ L+  M+  G  
Sbjct: 448 AGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCM 507

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVH 465
           P+  ++  L+ GL     I EA ++   +      +   VH
Sbjct: 508 PNESTYTILIEGLAYEGLIKEARDLLDELCSRGEEILLDVH 548



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 177/384 (46%), Gaps = 12/384 (3%)

Query: 147 RFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVS 202
           R  +T +T  R      L   GR    + VL E      +P+ +++ I L   CK +   
Sbjct: 158 RDAYTCDTLIRG-----LCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYK 212

Query: 203 NVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLI 262
               ++  M  KG  P++  + +++N  C+ GR+ +A + L  + + G   +  ++ +++
Sbjct: 213 QAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVL 272

Query: 263 DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
            G     R + A  L  +M Q GC PNVVT+  LI       +   A   L+ +   G +
Sbjct: 273 KGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCS 332

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL 382
           P+ + +N L+    K    D A+   D ++     PD  ++ +LL+ +C SG   +  +L
Sbjct: 333 PNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVEL 392

Query: 383 VCGLEVEAD---LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
           +  L+ +     L+ YN ++    KAG   +A++L N M+ KG  PD  ++  +  GLC 
Sbjct: 393 LHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCR 452

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
             +I++AI  +  +       N  ++ AI+  L +    H AI LF   I      +  +
Sbjct: 453 EDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNEST 512

Query: 500 YTVAIRGLLEGGRTEEAYILYSQM 523
           YT+ I GL   G  +EA  L  ++
Sbjct: 513 YTILIEGLAYEGLIKEARDLLDEL 536



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 111/483 (22%), Positives = 205/483 (42%), Gaps = 42/483 (8%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKETQLP-NFLSFNIALCNLCKLNDVSNVKDVIGM 210
           P+  A N +M      G+VD   +   E  +  +  + +  +  LC     +N   V+  
Sbjct: 126 PDVMAYNAMMAGYCGAGQVDAARRWCAERAVERDAYTCDTLIRGLCGRGRTANALAVLDE 185

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M+R+   P+V  + ILL   CK     +A +LL  M   G +  +  + V+++G  +  R
Sbjct: 186 MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 245

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           +D A    + +   GC PN V+Y  ++KG   A+ +  A   +  +  +G  P++V  N+
Sbjct: 246 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 305

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA 390
           LI  L + G  + AL+V + + +    P+S +                            
Sbjct: 306 LISFLCRKGLVEPALEVLEQIPKYGCSPNSLS---------------------------- 337

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
               YN LL  FCK    ++A+   + M+ +G  PD  S+  LL  LC + ++D A+ + 
Sbjct: 338 ----YNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELL 393

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
             +     A     +  ++D L +AG+  +A++L    + +    D+++Y+    GL   
Sbjct: 394 HQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCRE 453

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
            R E+A   + +++ + + PN   Y  ++L  CK R       L   +I      +  T 
Sbjct: 454 DRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTY 513

Query: 571 IRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTPVSLFDGFVPCERR 630
             L + +        A + L E+C+ G   +E      +L D  +  V+    F+PC   
Sbjct: 514 TILIEGLAYEGLIKEARDLLDELCSRG---EE------ILLDVHLIDVAFLTTFLPCSNA 564

Query: 631 AGN 633
            G 
Sbjct: 565 NGG 567



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 128/288 (44%), Gaps = 15/288 (5%)

Query: 267 RLRRLDMAGYLWE--KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
           RLR L   G L E  ++V +   P+  T  +LIK    +   + A   L         PD
Sbjct: 73  RLRSLVRRGELDEALRLVGSARRPDAGTCAALIKKLSASGRTAEARRVL-----AACGPD 127

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLP 380
           ++ +N ++      G  D A        E  +  D+YT  +L+  +C  GR     ++L 
Sbjct: 128 VMAYNAMMAGYCGAGQVDAA---RRWCAERAVERDAYTCDTLIRGLCGRGRTANALAVLD 184

Query: 381 KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
           +++       D+V Y  LL   CK     QA+KL + M DKG TPD  ++  ++ G+C  
Sbjct: 185 EML-RRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQE 243

Query: 441 RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSY 500
            ++D+AI   + +       N   +  ++  L  A R   A +L      +  P +VV++
Sbjct: 244 GRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTF 303

Query: 501 TVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
            + I  L   G  E A  +  Q+      PN+ +Y  +L +FCK++ +
Sbjct: 304 NMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKM 351


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/457 (25%), Positives = 221/457 (48%), Gaps = 9/457 (1%)

Query: 101 ETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIV 160
           +   G+  ++   G      T+   +  Y     +  V++   EM      P+ F   ++
Sbjct: 382 DRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLL 441

Query: 161 MDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
           +D L K G+ +    L   ++++   P+   + I L    K   +S + D++ +MV  G 
Sbjct: 442 LDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGI 501

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
            PN R+F  ++  + K   I E   +   M   G S +V  +  LID   +L R+D A  
Sbjct: 502 SPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVL 561

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEA-KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
            + +M+  G +PN V + SL+ G     K   +   FL+ML ++G  PD+VF N ++  L
Sbjct: 562 QFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEML-NQGIRPDIVFFNTVLCNL 620

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADL 392
            K G   +A  + D ++ + L PD  ++ +L+   C + R     KL+ G+    ++ ++
Sbjct: 621 CKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNI 680

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           V YN LL  +CKAG  + A  L+  ML KG TP   ++  +L GL  + +  EA  +Y  
Sbjct: 681 VSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVN 740

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           ++ +    +   ++ I+D   +     +A ++F+        LD++++ + I GL +GGR
Sbjct: 741 MIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGR 800

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
            E+A  L++ +    + P+  TYR++  +  +E +++
Sbjct: 801 KEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLE 837



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 112/473 (23%), Positives = 219/473 (46%), Gaps = 7/473 (1%)

Query: 101 ETVRGIVGELARVGC---VIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           E +  ++ ++  VGC   V+   T L  L    R E    +L    +      +P+  + 
Sbjct: 137 EAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSY 196

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
           NIV++  F  G+VD    +  E  + P+ +++N  +  LCK  +V   +DV   MV KG 
Sbjct: 197 NIVINGFFNEGQVDKAYSLFLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGV 256

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
            PN   +  +++  CK   +  A  +   M+  G   S   +  +IDG  + + +D A  
Sbjct: 257 KPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEG 316

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           ++++M+  G  P+ VTY ++I G  +A+    A      +  +G  PD + + ++ID L 
Sbjct: 317 VFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLC 376

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP---KLVCGLEVEADLV 393
           K  S D A  V+  +++  + P++ T+  L+     +G++  +    K +   ++E D+ 
Sbjct: 377 KAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVF 436

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            Y  LL Y CK G  N+A  L+++M+ KG  P    +  +L G      + E  ++   +
Sbjct: 437 TYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLM 496

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
           V N  + N  +   ++    +     + + +F +   +    +VV+Y   I  L + GR 
Sbjct: 497 VANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRV 556

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           ++A + ++QM +  V PN   +  ++   C     + V+ L  ++++  I  D
Sbjct: 557 DDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPD 609



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 125/501 (24%), Positives = 214/501 (42%), Gaps = 42/501 (8%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET----QLPNFLSFNIALCNLCK 197
           F +M   G  P+    N ++D L K   +D    V ++       P+ L++ I +  LCK
Sbjct: 318 FQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCK 377

Query: 198 LNDVSNVKDVIGMMVRKGFYPN-----------------------------------VRM 222
              V   + V   M+ KG  PN                                   V  
Sbjct: 378 AQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFT 437

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           + +LL+  CK G+  EA  L   MI  G   SV  + +++ G+ +   L     L   MV
Sbjct: 438 YGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMV 497

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
            NG SPN   + ++I  + +  M          ++ +G +P++V +  LID L K+G  D
Sbjct: 498 ANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVD 557

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALL 399
           DA+  ++ ++   + P++  F SL+  +C   ++  + +L   +    +  D+V +N +L
Sbjct: 558 DAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVL 617

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
              CK G   +A +L ++M+  G  PD  S+  L+ G C A ++DEA+ +  G+V     
Sbjct: 618 CNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLK 677

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            N   +  ++    +AGR   A  LFR  + +     V +Y   + GL   GR  EA  L
Sbjct: 678 PNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEAREL 737

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK 579
           Y  M       +  TY ++L  FCK        ++ Q +    ++LD  T   +   +FK
Sbjct: 738 YVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFK 797

Query: 580 FHSSSSAVNQLVEMCNLGLIP 600
                 A++    +   GL+P
Sbjct: 798 GGRKEDAMDLFAAIPANGLVP 818



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/383 (23%), Positives = 187/383 (48%), Gaps = 7/383 (1%)

Query: 129 YWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPN 184
           Y +  M   V+  F +M + G +PN      ++D L K+GRVD  +    +++ E   PN
Sbjct: 515 YAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPN 574

Query: 185 FLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLG 244
            + FN  +  LC ++    V+++   M+ +G  P++  F  +L   CK GR+ EA +L+ 
Sbjct: 575 NVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLID 634

Query: 245 LMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
            M+ +G    V ++  LIDG     R+D A  L + MV  G  PN+V+Y +L+ G+ +A 
Sbjct: 635 SMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAG 694

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
               A+     +  +G  P +  +N +++ L + G + +A ++Y  +++ + +    T+ 
Sbjct: 695 RIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYS 754

Query: 365 SLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
            +L   C +  F    K+   +C ++++ D++ +N ++    K G    A+ L+  +   
Sbjct: 755 IILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPAN 814

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
           G  P   ++  +   L     ++E   ++  +  +  A N+H+  A++ +L++ G   +A
Sbjct: 815 GLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRA 874

Query: 482 IQLFRRAIVEKYPLDVVSYTVAI 504
                +   + + L+  + ++ I
Sbjct: 875 GAYLSKLDEKNFSLEASTTSMLI 897



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/390 (24%), Positives = 185/390 (47%), Gaps = 10/390 (2%)

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY- 276
           P+   + I++ CFC++GR+   +   GL++  G  +       L+ G    +R+  A + 
Sbjct: 82  PDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHV 141

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML---ESEGHAPDLVFHNVLID 333
           L  +M + GC   VV+Y +L+KG  + +    A   L M+   +    +PD+V +N++I+
Sbjct: 142 LLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVIN 201

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS---GRFSLLPKLVCGLEVEA 390
                G  D A   Y   LE+ + PD  T+ +++  +C +    R   + + +    V+ 
Sbjct: 202 GFFNEGQVDKA---YSLFLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKP 258

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           + V YN ++   CKA   + A  ++  M+DKG  P N ++  ++ GLC A+ +D A  V+
Sbjct: 259 NNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVF 318

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
           Q ++      +   +  I+D L +A    KA  +F++ I +    D ++YT+ I GL + 
Sbjct: 319 QQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKA 378

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
              + A  ++ QM    V PN  TY  ++  +      + V + ++++    +E D  T 
Sbjct: 379 QSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTY 438

Query: 571 IRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
             L  ++ K    + A +    M   G+ P
Sbjct: 439 GLLLDYLCKNGKCNEARSLFDSMIRKGIKP 468



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 79/330 (23%), Positives = 145/330 (43%), Gaps = 20/330 (6%)

Query: 284 NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
           N  +P+  TY+ +I  F       + F+   ++   G   D +  N L+  L       +
Sbjct: 78  NKVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGE 137

Query: 344 ALDVYDGLLELKLVPDS------YTFCSLLSTVCLSGRFS----LLPKLVCGLE--VEAD 391
           A+ V      L+ +P+        ++ +LL  +C   R      LL  +V G +     D
Sbjct: 138 AMHVL-----LRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPD 192

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
           +V YN +++ F   G   Q  K Y+  L+ G +PD  ++  ++ GLC A+++D A +V+Q
Sbjct: 193 VVSYNIVINGFFNEG---QVDKAYSLFLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQ 249

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
            +V      N   +  I+D L +A     A  +F++ + +      V+Y   I GL +  
Sbjct: 250 QMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQ 309

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSI 571
             + A  ++ QM    V P+  TY  ++   CK + I   + + Q +ID  ++ D  T  
Sbjct: 310 AVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYT 369

Query: 572 RLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            +   + K  S   A     +M + G+ P+
Sbjct: 370 IIIDGLCKAQSVDRAEGVFQQMIDKGVKPN 399



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/293 (21%), Positives = 129/293 (44%), Gaps = 18/293 (6%)

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR------ 375
           APD   ++++I C  ++G  +     +  +L+     D      LL  +C + R      
Sbjct: 81  APDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMH 140

Query: 376 --FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD---KGFTPDNYSF 430
                +P++ C L V    V YN LL   C      +A +L + M+D      +PD  S+
Sbjct: 141 VLLRQMPEVGCRLGV----VSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSY 196

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             ++ G     ++D+A +++  + ++   V    +  I+D L +A    +A  +F++ + 
Sbjct: 197 NIVINGFFNEGQVDKAYSLFLEMGVSPDVV---TYNTIIDGLCKAQEVDRAEDVFQQMVE 253

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
           +    + V+Y   I GL +    + A  ++ +M    V P+  TY  ++   CK + +  
Sbjct: 254 KGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDR 313

Query: 551 VKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
            + + Q +ID  ++ D+ T   +   + K  +   A     +M + G+ PD +
Sbjct: 314 AEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNL 366



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 63/275 (22%), Positives = 118/275 (42%), Gaps = 24/275 (8%)

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV----------CGLEVEADL 392
           DAL ++D LL L   P S    + L +V    + S   KL           C  +V  D 
Sbjct: 26  DALKLFDELL-LHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLRDCSNKVAPDC 84

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
             Y+ ++  FC+ G        +  +L  G+  D+     LL+GLC  +++ EA++V   
Sbjct: 85  CTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHV--- 141

Query: 453 IVMNNPAVNAHV----HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL---DVVSYTVAIR 505
           ++   P V   +    +  ++  L +  R  +A +L    +  +      DVVSY + I 
Sbjct: 142 LLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVIN 201

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
           G    G+ ++AY L+ +M    V P+  TY  ++   CK + +   + + Q +++  ++ 
Sbjct: 202 GFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKP 258

Query: 566 DYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           +  T   +   + K      A     +M + G+ P
Sbjct: 259 NNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKP 293



 Score = 43.5 bits (101), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 52/241 (21%), Positives = 103/241 (42%), Gaps = 9/241 (3%)

Query: 48  LAPHIV-HSTLLN--CPSDLIALSFFIWCAKQRDYFH-DVQSFDHMISVVTRLTGRFETV 103
           L P+IV ++TLL+  C +  I  ++ ++    R      V++++ +++ + R +GRF   
Sbjct: 676 LKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFR-SGRFSEA 734

Query: 104 RGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDV 163
           R +   + +   +    T+ + L  + +   +    + F  +       +    NI++D 
Sbjct: 735 RELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDG 794

Query: 164 LFKIGR----VDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN 219
           LFK GR    +DL   +     +P+ +++ +   NL +   +  +  +  +M + G  PN
Sbjct: 795 LFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPN 854

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
             M   L+      G I  A   L  +     SL  +  ++LI  F R      A  L E
Sbjct: 855 SHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFSREEYQQHAKSLPE 914

Query: 280 K 280
           K
Sbjct: 915 K 915


>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/404 (24%), Positives = 194/404 (48%), Gaps = 6/404 (1%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ---LPNFLSFNIALCNLCKLNDVSNVK 205
           G  P+  A N ++  L K+G+VD  ++V +E +    PN  ++NI +  LC+   +    
Sbjct: 338 GSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDAAPNLSTYNILIDMLCRAGKLDCAF 397

Query: 206 DVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF 265
           ++   M + G +PNVR   I+++  CK  ++ EA  +   M     +     +  LIDG 
Sbjct: 398 ELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGL 457

Query: 266 RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL 325
            ++ R+D A  ++EKM+ + C  N + YTSLIK F               + ++  +PDL
Sbjct: 458 GKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDL 517

Query: 326 VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCG 385
              N  +DC+ K G  +    +++ +   + VPD+ ++  L+  +  +G  +   +L   
Sbjct: 518 QLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYS 577

Query: 386 LEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
           ++ +    D   YN ++  FCK G  N+A +L   M  KGF P   ++  ++ GL    +
Sbjct: 578 MKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDR 637

Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTV 502
           +DEA  +++        +N  ++++++D   + GR  +A  +    + +    +V ++  
Sbjct: 638 LDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNS 697

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
            +  L++     EA + +  MK +   PN  TY +++   CK R
Sbjct: 698 LLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVR 741



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 126/563 (22%), Positives = 234/563 (41%), Gaps = 24/563 (4%)

Query: 61  PSDLIALSFFIWCAKQ---RDYFHDVQS-----FDHMISVVTRLTGRFETVR------GI 106
           PS    +   + C K    R+ F  VQ+     F    S  T L G F  V        +
Sbjct: 131 PSVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTL 190

Query: 107 VGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK 166
             ++  +G       F   +R + +       L   DEM       +    N+ +D   K
Sbjct: 191 FQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGK 250

Query: 167 IGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
           +G+VD+  K   E +     P+ +++   +  LCK N +    ++   + +    P    
Sbjct: 251 VGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYA 310

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           +  ++  +   G+  EAY LL      G+  SV A+  ++   R++ ++D A  ++E+M 
Sbjct: 311 YNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMK 370

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
           ++  +PN+ TY  LI     A     AF   D ++  G  P++   N+++D L K    D
Sbjct: 371 KDA-APNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLD 429

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNAL 398
           +A  +++ +      PD  TFCSL+  +   GR    + +  K++   +   + +VY +L
Sbjct: 430 EACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKML-DSDCRTNSIVYTSL 488

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           +  F   G      K+Y  M+++  +PD       +  +  A + ++   +++ I     
Sbjct: 489 IKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRF 548

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
             +A  ++ ++  LI+AG  ++  +LF     +   LD  +Y + I G  + G+  +AY 
Sbjct: 549 VPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQ 608

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
           L  +MK     P   TY  ++    K   +     L ++    RIEL+      L     
Sbjct: 609 LLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFG 668

Query: 579 KFHSSSSAVNQLVEMCNLGLIPD 601
           K      A   L E+   GL P+
Sbjct: 669 KVGRIDEAYLILEELMQKGLTPN 691



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 111/472 (23%), Positives = 208/472 (44%), Gaps = 18/472 (3%)

Query: 141 AFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNF-LSFNIALCNL 195
           A + +    F P       V+ VL ++  V+  I+  +     T+LP+   S+N  L  +
Sbjct: 52  AENALSALNFKPQP---EFVIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVM 108

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRM-FEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
            +  +   +  ++G M   GF P+V    E++L+C  K  ++ E + ++  M       +
Sbjct: 109 ARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLSCV-KANKLREGFDVVQNMRKFKFRPA 167

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
            +A+T LI  F  +   DM   L+++M + G  P V  +T+LI+GF +      A S LD
Sbjct: 168 FSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLD 227

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            ++S     D+V +NV ID   K+G  D A   +  +    L PD  T+ S++  +C + 
Sbjct: 228 EMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKAN 287

Query: 375 RFSLLPKLVCGLEVEADL---VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
           R     ++   LE    +     YN ++  +  AG  ++A  L      KG  P   ++ 
Sbjct: 288 RLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYN 347

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            +L  L    K+DEA+ V++ +   + A N   +  ++D L  AG+   A +L  R  ++
Sbjct: 348 CILTCLRKMGKVDEALRVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDCAFEL--RDSMQ 404

Query: 492 KYPL--DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
           K  L  +V +  + +  L +  + +EA  ++ QM +    P+  T+  ++    K   + 
Sbjct: 405 KAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVD 464

Query: 550 MVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
              ++ + ++D+    +      L K  F             +M N    PD
Sbjct: 465 DAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPD 516



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 153/308 (49%), Gaps = 7/308 (2%)

Query: 151 TPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKD 206
           +P+    N  MD +FK G  + G  + +E +    +P+  S++I +  L K    +   +
Sbjct: 514 SPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYE 573

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
           +   M  +G   + R + I+++ FCK G++ +AYQLL  M T G   +V  +  +IDG  
Sbjct: 574 LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLA 633

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
           ++ RLD A  L+E+        NVV Y+SLI GF +      A+  L+ L  +G  P++ 
Sbjct: 634 KIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVY 693

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLV 383
             N L+D L K    ++AL  +  + ELK  P+  T+  L++ +C   +F+   +  + +
Sbjct: 694 TWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEM 753

Query: 384 CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
               ++   + Y  ++S   KAG   +A  L++     G  PD+  +  ++ GL    + 
Sbjct: 754 QKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRA 813

Query: 444 DEAINVYQ 451
            +A ++++
Sbjct: 814 MDAFSLFE 821



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 69/311 (22%), Positives = 135/311 (43%), Gaps = 21/311 (6%)

Query: 59  NCPSDLIALSFFIWCA----------------KQRDYFHDVQSFDHMISVVTRLTGRFET 102
           NC  DL  L+ ++ C                 K R +  D +S+  +I  + +     ET
Sbjct: 512 NCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANET 571

Query: 103 VRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMD 162
              +   +   GCV+  + + + +  + +        +  +EM   GF P       V+D
Sbjct: 572 YE-LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVID 630

Query: 163 VLFKIGRVDLGIKVLKETQLP----NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYP 218
            L KI R+D    + +E +      N + ++  +    K+  +     ++  +++KG  P
Sbjct: 631 GLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTP 690

Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
           NV  +  LL+   K   I EA      M  L  + +   + +LI+G  ++R+ + A   W
Sbjct: 691 NVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFW 750

Query: 279 EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
           ++M + G  P+ ++YT++I G  +A   + A +  D  ++ G  PD   +N +I+ LS  
Sbjct: 751 QEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNG 810

Query: 339 GSYDDALDVYD 349
               DA  +++
Sbjct: 811 NRAMDAFSLFE 821


>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 123/500 (24%), Positives = 234/500 (46%), Gaps = 18/500 (3%)

Query: 26  KSIHQISSPKVCATTHQDFPIILAPHIVH-STLLNCPSDLIALSFFIWCAKQRDYF---H 81
           KS+H  +     ++ H+   +   P I   + LL   + +   S  +  +K+ D F    
Sbjct: 30  KSLHFNTLDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPP 89

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV +   +I+    L  R +    ++ ++ ++G      TF   +R        G  L+ 
Sbjct: 90  DVYTLTIVINSFCHLN-RVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDV 148

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNI---ALCN 194
           FD+M   GF PN      +M+ L K  ++   + +  E       P+  ++N    ALCN
Sbjct: 149 FDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCN 208

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           LC+   V+ +   +  MV+    PNV    I+++  CK G++ EA+ ++ +MI  G    
Sbjct: 209 LCEWKHVTTL---LNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPD 265

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           V  +  L+DG      +D A  +++ MV+NGC  NVV+Y +LI G+ + +    A    +
Sbjct: 266 VVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFE 325

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            +  +   P+ + ++ LI  L  +G   DA+ +++ ++    +P+  T+  LL  +C + 
Sbjct: 326 EMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNH 385

Query: 375 RFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
           R +    L K + G  ++ D+ VYN  +   C+AG    A  L++ +  +G  PD ++  
Sbjct: 386 RLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHN 445

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            ++RGLC    +DEA  +++ +  N    N   +  I   L++  +  +AIQL    +  
Sbjct: 446 IMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLAR 505

Query: 492 KYPLDVVSYTVAIRGLLEGG 511
            +  DV +  + ++ L + G
Sbjct: 506 GFSADVSTTALLVKMLSDDG 525



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 116/463 (25%), Positives = 201/463 (43%), Gaps = 7/463 (1%)

Query: 122 FLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVL 177
           F   L    + + Y  VL    +M  FG  P+ +   IV++    + RVD  +    K+L
Sbjct: 59  FAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKIL 118

Query: 178 KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIA 237
           K    P+  +F   +  LC +  +    DV   MV +GF PNV  +  L+N  CK  ++ 
Sbjct: 119 KLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLT 178

Query: 238 EAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLI 297
           EA  L   MI  G S  +  +  LI     L        L  +MV++   PNVV+   ++
Sbjct: 179 EALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVV 238

Query: 298 KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
               +    + A   +DM+   G  PD+V +  L+D        D+A+ V+D ++    V
Sbjct: 239 DALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCV 298

Query: 358 PDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKL 414
            +  ++ +L++  C   R      L + +C  E+  + + Y+ L+   C  G    A+ L
Sbjct: 299 CNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIAL 358

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
           +N M+  G  P+  ++  LL  LC   ++ EA+ + + I  +N   +  V+   +D +  
Sbjct: 359 FNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCR 418

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
           AG    A  LF          DV ++ + IRGL + G  +EA  L+ +M       N  T
Sbjct: 419 AGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCT 478

Query: 535 YRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFI 577
           Y  +     +        +LL++++      D  T+  L K +
Sbjct: 479 YNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKML 521



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 108/440 (24%), Positives = 205/440 (46%), Gaps = 13/440 (2%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+  +  I + + C LN V     V+  +++ G  P+   F  L+   C +G+I EA  +
Sbjct: 89  PDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDV 148

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
              M+  G   +V  +  L++G  + R+L  A  L+ +M+  G SP++ TY SLI     
Sbjct: 149 FDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCN 208

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
              +    + L+ +      P++V  N+++D L K G   +A DV D +++  + PD  T
Sbjct: 209 LCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVT 268

Query: 363 FCSLLSTVCLSGR-------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLY 415
           + +L+   CL          F ++ +  C   V    V YN L++ +CK    ++A+ L+
Sbjct: 269 YAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNV----VSYNTLINGYCKIQRIDKAMYLF 324

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
             M  +   P+  ++  L+ GLC   ++ +AI ++  +V      N   ++ ++D L + 
Sbjct: 325 EEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKN 384

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
            R  +A+ L +         DV  Y +AI G+   G  E A  L+S +    + P+ +T+
Sbjct: 385 HRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTH 444

Query: 536 RVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCN 595
            +M+   CK   +    +L +++ +     +  T   +T+ + + + +S A+  L EM  
Sbjct: 445 NIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLA 504

Query: 596 LGLIPDEMWRKL--GLLSDE 613
            G   D     L   +LSD+
Sbjct: 505 RGFSADVSTTALLVKMLSDD 524



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/258 (23%), Positives = 112/258 (43%), Gaps = 5/258 (1%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE----TQLPNFL 186
           R EM   V + FD M R G   N  + N +++   KI R+D  + + +E      +PN +
Sbjct: 279 RSEMDEAV-KVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTM 337

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           +++  +  LC +  + +   +   MV  G  PN+  + ILL+  CK  R+AEA  LL  +
Sbjct: 338 TYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAI 397

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
                   V  + + IDG  R   L+ A  L+  +   G  P+V T+  +I+G  +  + 
Sbjct: 398 EGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLL 457

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
             A      ++  G   +   +N +   L +      A+ + + +L      D  T   L
Sbjct: 458 DEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALL 517

Query: 367 LSTVCLSGRFSLLPKLVC 384
           +  +   G    + +++C
Sbjct: 518 VKMLSDDGLDQSVKQILC 535


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 141/611 (23%), Positives = 273/611 (44%), Gaps = 63/611 (10%)

Query: 37  CATTHQDFPIILAPHIVHSTLLNCPSD-LIALSFFIWCAKQRDYFHDVQSFDHMISVVTR 95
           C +     P I   H+  S+L +   D   AL+F  W ++   Y H V S+  +++++  
Sbjct: 78  CPSLKSMVPAISPSHV--SSLFSLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLIN 135

Query: 96  LTGRFETVRGIVGELARV------GCVIKAQT-FLLFL-RIYWRGEMYGMVLEAFDEMGR 147
                    G VG + ++       C   A T F+L L R   + E + +  +    +G 
Sbjct: 136 --------NGYVGVVFKIRLLMIKSCDSVADTLFVLDLCRKMNKDESFELKYKLI--IGC 185

Query: 148 FGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDV 207
           +    N+ AR  ++D + ++      +++L++   PN  ++N  +   CK+ +V      
Sbjct: 186 YNTLLNSLARFGLVDEMKQVY-----MEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQY 240

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
           + M+V  G  P+   +  L+  +C+   +  A+++   M   G   +  A+T LI G   
Sbjct: 241 VSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCV 300

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
            RR+D A  L+ KM  + C P V TYT LIK    ++  S A + +  +E +G  P++  
Sbjct: 301 ERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHT 360

Query: 328 HNVLIDCLS-----------------------------------KMGSYDDALDVYDGLL 352
           + VLID L                                    K G  +DALDV + + 
Sbjct: 361 YTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELME 420

Query: 353 ELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE--VEADLVVYNALLSYFCKAGFPNQ 410
              L P++ T+  L+   C       +  L   LE  V  D+V YN+L+   C++G  + 
Sbjct: 421 SRNLRPNTRTYNELIKGYCKRNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDS 480

Query: 411 AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
           A +L + M D+G  PD +++  ++  LC +++++EA +++  +   +   N  ++TA++D
Sbjct: 481 AYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALID 540

Query: 471 RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
              +AG+ ++A  +  + + +    + +++   I GL   G+ +EA +L  +M  I + P
Sbjct: 541 GYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQP 600

Query: 531 NAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQL 590
              T  +++    K+ +     R  Q ++ +  + D HT     +   +      A + +
Sbjct: 601 TVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMV 660

Query: 591 VEMCNLGLIPD 601
            +M   G+ PD
Sbjct: 661 AKMKENGVSPD 671



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 124/506 (24%), Positives = 231/506 (45%), Gaps = 9/506 (1%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           ++ +++ M++   ++ G  E     V  +   G      T+   +  Y + +      + 
Sbjct: 217 NIYTYNKMVNGYCKV-GNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKV 275

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCK 197
           F EM   G   N  A   ++  L    R+D    L +K+  +   P   ++ + +  LC 
Sbjct: 276 FKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCG 335

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
               S   +++  M  KG  PN+  + +L++  C   ++ +A +LLG M+  G   +V  
Sbjct: 336 SERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVIT 395

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  LI+G+ +   ++ A  + E M      PN  TY  LIKG+ +  +   A   L+ + 
Sbjct: 396 YNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVHK-AMGVLNKML 454

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
                PD+V +N LID   + G++D A  +   + +  LVPD +T+ S++ ++C S R  
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVE 514

Query: 378 LLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
               L   LE   V  ++V+Y AL+  +CKAG  N+A  +   ML K   P++ +F  L+
Sbjct: 515 EACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALI 574

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            GLC   K+ EA  + + +V  +        T ++ RL++ G    A + F++ +     
Sbjct: 575 HGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTK 634

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
            D  +YT  I+     GR ++A  + ++MK   V P+ +TY  ++  +           +
Sbjct: 635 PDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVV 694

Query: 555 LQDVIDARIELDYHTSIRLTKFIFKF 580
           L+ + D   E   HT + L K + + 
Sbjct: 695 LKRMHDTGCEPSQHTFLSLIKHLLEM 720



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 125/508 (24%), Positives = 226/508 (44%), Gaps = 27/508 (5%)

Query: 102 TVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVM 161
           T   +V    +VG V +A  ++             M++EA       G  P+ F    ++
Sbjct: 220 TYNKMVNGYCKVGNVEEANQYV------------SMIVEA-------GLDPDFFTYTSLI 260

Query: 162 DVLFKIGRVDLGIKVLKETQLP----NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFY 217
               +   +D   KV KE  L     N +++   +  LC    +    D+   M     Y
Sbjct: 261 MGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCY 320

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
           P VR + +L+   C   R +EA  L+  M   G   +++ +TVLID      +L+ A  L
Sbjct: 321 PTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKAREL 380

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
             +M++ G  PNV+TY +LI G+ +  M   A   ++++ES    P+   +N LI    K
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCK 440

Query: 338 MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVV 394
              +  A+ V + +LE K++PD  T+ SL+   C SG F    +L+  +       D   
Sbjct: 441 RNVHK-AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWT 499

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           Y +++   CK+    +A  L++++  K   P+   +  L+ G C A K++EA  + + ++
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKML 559

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
             N   N+    A++  L   G+  +A  L  + +       V + T+ I  LL+ G  +
Sbjct: 560 SKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFD 619

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLT 574
            AY  + QM      P+A+TY   + ++C+E  ++  + ++  + +  +  D  T   L 
Sbjct: 620 HAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLI 679

Query: 575 KFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
           K       ++SA   L  M + G  P +
Sbjct: 680 KGYGDLGRTNSAFVVLKRMHDTGCEPSQ 707



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 107/452 (23%), Positives = 181/452 (40%), Gaps = 67/452 (14%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCKLNDVSNVKDV 207
           P+    N ++D   + G  D   ++L        +P+  ++   + +LCK   V    D+
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDL 519

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT---LGTSLSVNAWTVLIDG 264
              + +K   PNV M+  L++ +CK G++ EA+ +L  M++   L  SL+ NA   LI G
Sbjct: 520 FDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNA---LIHG 576

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
                +L  A  L EKMV+    P V T T LI   ++   F  A+     + S G  PD
Sbjct: 577 LCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPD 636

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR--------- 375
              +   I    + G   DA D+   + E  + PD +T+ SL+      GR         
Sbjct: 637 AHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLK 696

Query: 376 --------------FSLLPKL--------------VCGLE--VEADLVV----------- 394
                          SL+  L              VC +   +E D+VV           
Sbjct: 697 RMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGV 756

Query: 395 ------YNALLSYFCKAGFPNQAVKLYNTMLDK-GFTPDNYSFVGLLRGLCGARKIDEAI 447
                 Y  L+   C+ G    A K+++ M  K G +P    F  LL   C   K +EA 
Sbjct: 757 TPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAA 816

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            V   ++             ++ RL + G   +   +F+  +   Y  D +++ + I G+
Sbjct: 817 KVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGV 876

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
            + G  E  Y L++ M+      ++ TY +++
Sbjct: 877 GKQGLVEAFYELFNVMEKNGCTFSSQTYSLLI 908



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 5/170 (2%)

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL-----KETQLPNFLSFN 189
           + +V+E  ++M   G TPN  +   +M  + +IG + +  KV      KE   P+ L FN
Sbjct: 741 FDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFN 800

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
             L   CKL   +    V+  M+  G  P +   +IL+    K G       +   ++  
Sbjct: 801 ALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQC 860

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG 299
           G      AW ++IDG  +   ++    L+  M +NGC+ +  TY+ LI+G
Sbjct: 861 GYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYSLLIEG 910


>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
 gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
 gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/404 (24%), Positives = 194/404 (48%), Gaps = 6/404 (1%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ---LPNFLSFNIALCNLCKLNDVSNVK 205
           G  P+  A N ++  L K+G+VD  +KV +E +    PN  ++NI +  LC+   +    
Sbjct: 338 GSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAF 397

Query: 206 DVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF 265
           ++   M + G +PNVR   I+++  CK  ++ EA  +   M     +     +  LIDG 
Sbjct: 398 ELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGL 457

Query: 266 RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL 325
            ++ R+D A  ++EKM+ + C  N + YTSLIK F               + ++  +PDL
Sbjct: 458 GKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDL 517

Query: 326 VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCG 385
              N  +DC+ K G  +    +++ +   + VPD+ ++  L+  +  +G  +   +L   
Sbjct: 518 QLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYS 577

Query: 386 LEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
           ++ +    D   YN ++  FCK G  N+A +L   M  KGF P   ++  ++ GL    +
Sbjct: 578 MKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDR 637

Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTV 502
           +DEA  +++        +N  ++++++D   + GR  +A  +    + +    ++ ++  
Sbjct: 638 LDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNS 697

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
            +  L++     EA + +  MK +   PN  TY +++   CK R
Sbjct: 698 LLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVR 741



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 125/563 (22%), Positives = 233/563 (41%), Gaps = 24/563 (4%)

Query: 61  PSDLIALSFFIWCAKQ---RDYFHDVQ-----SFDHMISVVTRLTGRFETVR------GI 106
           PS    +   + C K    R+ +  VQ      F    S  T L G F  V        +
Sbjct: 131 PSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTL 190

Query: 107 VGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK 166
             ++  +G       F   +R + +       L   DEM       +    N+ +D   K
Sbjct: 191 FQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGK 250

Query: 167 IGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
           +G+VD+  K   E +     P+ +++   +  LCK N +    ++   + +    P    
Sbjct: 251 VGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYA 310

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           +  ++  +   G+  EAY LL      G+  SV A+  ++   R++ ++D A  ++E+M 
Sbjct: 311 YNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK 370

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
           ++  +PN+ TY  LI     A     AF   D ++  G  P++   N+++D L K    D
Sbjct: 371 KDA-APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLD 429

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNAL 398
           +A  +++ +      PD  TFCSL+  +   GR    + +  K++   +   + +VY +L
Sbjct: 430 EACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKML-DSDCRTNSIVYTSL 488

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           +  F   G      K+Y  M+++  +PD       +  +  A + ++   +++ I     
Sbjct: 489 IKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRF 548

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
             +A  ++ ++  LI+AG  ++  +LF     +   LD  +Y + I G  + G+  +AY 
Sbjct: 549 VPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQ 608

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
           L  +MK     P   TY  ++    K   +     L ++    RIEL+      L     
Sbjct: 609 LLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFG 668

Query: 579 KFHSSSSAVNQLVEMCNLGLIPD 601
           K      A   L E+   GL P+
Sbjct: 669 KVGRIDEAYLILEELMQKGLTPN 691



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 111/472 (23%), Positives = 208/472 (44%), Gaps = 18/472 (3%)

Query: 141 AFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNF-LSFNIALCNL 195
           A + +    F P       V+ VL ++  V+  I+  +     T+LP+   S+N  L  +
Sbjct: 52  AENTLSALSFKPQP---EFVIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVM 108

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRM-FEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
            +  +   +  ++G M   GF P+V    E++L C  K  ++ E Y ++ +M       +
Sbjct: 109 ARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCV-KANKLREGYDVVQMMRKFKFRPA 167

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
            +A+T LI  F  +   DM   L+++M + G  P V  +T+LI+GF +      A S LD
Sbjct: 168 FSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLD 227

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            ++S     D+V +NV ID   K+G  D A   +  +    L PD  T+ S++  +C + 
Sbjct: 228 EMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKAN 287

Query: 375 RFSLLPKLVCGLEVEADL---VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
           R     ++   LE    +     YN ++  +  AG  ++A  L      KG  P   ++ 
Sbjct: 288 RLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYN 347

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            +L  L    K+DEA+ V++ +   + A N   +  ++D L  AG+   A +L  R  ++
Sbjct: 348 CILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFEL--RDSMQ 404

Query: 492 KYPL--DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
           K  L  +V +  + +  L +  + +EA  ++ +M +    P+  T+  ++    K   + 
Sbjct: 405 KAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVD 464

Query: 550 MVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
              ++ + ++D+    +      L K  F             +M N    PD
Sbjct: 465 DAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPD 516



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/386 (24%), Positives = 168/386 (43%), Gaps = 36/386 (9%)

Query: 151 TPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKD 206
           +P+    N  MD +FK G  + G  + +E +    +P+  S++I +  L K    +   +
Sbjct: 514 SPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYE 573

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
           +   M  +G   + R + I+++ FCK G++ +AYQLL  M T G   +V  +  +IDG  
Sbjct: 574 LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLA 633

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
           ++ RLD A  L+E+        NVV Y+SLI GF +      A+  L+ L  +G  P+L 
Sbjct: 634 KIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLY 693

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL 386
             N L+D L K    ++AL  +  + ELK  P+  T+  L++ +C   +F          
Sbjct: 694 TWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKF---------- 743

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
                                 N+A   +  M  +G  P   S+  ++ GL  A  I EA
Sbjct: 744 ----------------------NKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEA 781

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
             ++     N    ++  + A+++ L    R   A  LF        P+   +  V +  
Sbjct: 782 GALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDT 841

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNA 532
           L +    E+A I+ + ++      +A
Sbjct: 842 LHKNDCLEQAAIVGAVLRETGKARHA 867



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/342 (21%), Positives = 147/342 (42%), Gaps = 23/342 (6%)

Query: 51  HIVHSTLLN--CPSDLIALSFFIWCA----------------KQRDYFHDVQSFDHMISV 92
           H ++  ++N  C  DL  L+ ++ C                 K R +  D +S+  +I  
Sbjct: 502 HKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHG 561

Query: 93  VTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTP 152
           + +     ET   +   +   GCV+  + + + +  + +        +  +EM   GF P
Sbjct: 562 LIKAGFANETYE-LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEP 620

Query: 153 NTFARNIVMDVLFKIGRVDLGIKVLKETQLP----NFLSFNIALCNLCKLNDVSNVKDVI 208
                  V+D L KI R+D    + +E +      N + ++  +    K+  +     ++
Sbjct: 621 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLIL 680

Query: 209 GMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRL 268
             +++KG  PN+  +  LL+   K   I EA      M  L  + +   + +LI+G  ++
Sbjct: 681 EELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKV 740

Query: 269 RRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH 328
           R+ + A   W++M + G  P+ ++YT++I G  +A   + A +  D  ++ G  PD   +
Sbjct: 741 RKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACY 800

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
           N +I+ LS      DA  +++      L   + T   LL T+
Sbjct: 801 NAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTL 842


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 145/596 (24%), Positives = 252/596 (42%), Gaps = 121/596 (20%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV---LKETQLP-NFLSFNIALC 193
            ++ F +M R    P+    N +M V+ ++ R DL I +   ++  Q+P +  SFNI + 
Sbjct: 61  AIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIK 120

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
             C  + +       G + + GF P+V  F  LL+  C   R++EA  L   M       
Sbjct: 121 CFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM----CRP 176

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
           +V  +T L++G  R  R+  A  L ++MV++G  PN +TY +++ G  +      A + L
Sbjct: 177 NVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLL 236

Query: 314 DMLESEGH-APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
             +E   H  P++V ++ +ID L K G + DA ++Y  + E  + PD +T+  ++   C 
Sbjct: 237 RKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCS 296

Query: 373 SGRFSLLPKLVCGL--------------------------EVEA------------DLVV 394
           SGR+S   +L+  +                          E E             + + 
Sbjct: 297 SGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTIT 356

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ--- 451
           YN+++  FCK    + A  ++  M  KG +PD ++F  L+ G CGA++ID+   +     
Sbjct: 357 YNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMT 416

Query: 452 --GIVMNNPAVNAHVH------------------------------TAIVDRLIEAGRCH 479
             G+V +    N  +H                                ++D L + G+  
Sbjct: 417 ETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLK 476

Query: 480 KAIQLFRRAIVEKYPLD-----------VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAV 528
            A+++F+     K  LD           V +Y + I GL+  G+  EA  LY +M H  +
Sbjct: 477 DALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGI 536

Query: 529 PPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVN 588
            PN  TY  M+   CK+  +    ++           D   S   +  +  F++  S   
Sbjct: 537 VPNTITYSSMINGLCKQSRLDEATQM----------FDSMGSKSFSPDVVTFNTLVSGY- 585

Query: 589 QLVEMCNLGLIPD------EMWRKLGLLSDETMTPVSLFDGFVPCERRAGNANHLL 638
                C  G + D      EM R+ G+++D  +T ++L  GF    R+ GN N  L
Sbjct: 586 -----CKAGRVDDGLELFCEMGRR-GIVAD-AITYITLIHGF----RKVGNINGAL 630



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 115/456 (25%), Positives = 211/456 (46%), Gaps = 22/456 (4%)

Query: 136 GMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ-----LPNFLS 187
           G V+EA    D M   G  PN      ++D + KIG     + +L++ +      PN + 
Sbjct: 192 GRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVI 251

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           ++  +  L K    S+  ++   M  KG +P++  +  +++ FC  GR +EA +LL  M+
Sbjct: 252 YSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEML 311

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
               + +V  ++ LI+ + + R+   A  L+++M+  G  PN +TY S+I GF +     
Sbjct: 312 ERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLD 371

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A     ++ ++G +PD+   N LID        DD  ++   + E  LV D+ T+ +L+
Sbjct: 372 AAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLI 431

Query: 368 STVCLSGRFSL---LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM------ 418
              CL G  +    L + +    V  D+V  N LL   C  G    A++++  M      
Sbjct: 432 HGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMD 491

Query: 419 LD-----KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
           LD      G  PD  ++  L+ GL    K  EA  +Y+ +       N   ++++++ L 
Sbjct: 492 LDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLC 551

Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
           +  R  +A Q+F     + +  DVV++   + G  + GR ++   L+ +M    +  +A 
Sbjct: 552 KQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAI 611

Query: 534 TYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
           TY  ++  F K  NI     + Q++I + +  D  T
Sbjct: 612 TYITLIHGFRKVGNINGALDIFQEMISSGVYPDTIT 647



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 114/443 (25%), Positives = 195/443 (44%), Gaps = 28/443 (6%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALC 193
           +L   +EM      PN    + ++D L+K GR      +  E Q     P+  ++N  + 
Sbjct: 235 LLRKMEEMSHI--KPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMID 292

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
             C     S  + ++  M+ +   PNV  +  L+N + K  +  EA +L   M+  G   
Sbjct: 293 GFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIP 352

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
           +   +  +IDGF +  RLD A +++  M   GCSP+V T+ +LI G+  AK        L
Sbjct: 353 NTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELL 412

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
             +   G   D   +N LI     +G  + ALD+   ++   + PD  T  +LL  +C +
Sbjct: 413 HEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDN 472

Query: 374 GR-------FSLLPKLVCGLE-------VEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
           G+       F  + K    L+       VE D+  YN L+S     G   +A +LY  M 
Sbjct: 473 GKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMP 532

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
            +G  P+  ++  ++ GLC   ++DEA  ++  +   + + +      +V    +AGR  
Sbjct: 533 HRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVD 592

Query: 480 KAIQLF----RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
             ++LF    RR IV     D ++Y   I G  + G    A  ++ +M    V P+  T 
Sbjct: 593 DGLELFCEMGRRGIVA----DAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITI 648

Query: 536 RVMLLSFCKERNIKMVKRLLQDV 558
           R ML     +  +K    +L+D+
Sbjct: 649 RSMLTVLWSKEELKRAVAMLEDL 671



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 121/513 (23%), Positives = 228/513 (44%), Gaps = 23/513 (4%)

Query: 108 GELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKI 167
           G++ ++G      TF   L      +     L+ F +M R    PN      +M+ L + 
Sbjct: 136 GKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCR----PNVVTFTTLMNGLCRE 191

Query: 168 GRVDLGIKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG-FYPNVRM 222
           GRV   + +L    ++   PN +++   +  +CK+ D  +  +++  M       PNV +
Sbjct: 192 GRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVI 251

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           +  +++   K GR ++A+ L   M   G    +  +  +IDGF    R   A  L ++M+
Sbjct: 252 YSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEML 311

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
           +   +PNVVTY++LI  +++ + F  A    D +   G  P+ + +N +ID   K    D
Sbjct: 312 ERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLD 371

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALL 399
            A  ++  +      PD +TF +L+   C + R     +L+  +    + AD   YN L+
Sbjct: 372 AAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLI 431

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
             FC  G  N A+ L   M+  G  PD  +   LL GLC   K+ +A+ +++ +  +   
Sbjct: 432 HGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMD 491

Query: 460 VNA-----------HVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           ++A             +  ++  LI  G+  +A +L++         + ++Y+  I GL 
Sbjct: 492 LDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLC 551

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
           +  R +EA  ++  M   +  P+  T+  ++  +CK   +     L  ++    I  D  
Sbjct: 552 KQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAI 611

Query: 569 TSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           T I L     K  + + A++   EM + G+ PD
Sbjct: 612 TYITLIHGFRKVGNINGALDIFQEMISSGVYPD 644



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/400 (22%), Positives = 169/400 (42%), Gaps = 19/400 (4%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           +++  F D+ +++ MI      +GR+   + ++ E+          T+   +  Y +   
Sbjct: 276 QEKGIFPDLFTYNCMIDGFCS-SGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERK 334

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNI 190
           +    E +DEM   G  PNT   N ++D   K  R+D    +      +   P+  +FN 
Sbjct: 335 FFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNT 394

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +   C    + +  +++  M   G   +   +  L++ FC +G +  A  L   MI+ G
Sbjct: 395 LIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSG 454

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQ-----------NGCSPNVVTYTSLIKG 299
               +     L+DG     +L  A  +++ M +           NG  P+V TY  LI G
Sbjct: 455 VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISG 514

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
            +    F  A      +   G  P+ + ++ +I+ L K    D+A  ++D +      PD
Sbjct: 515 LINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPD 574

Query: 360 SYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYN 416
             TF +L+S  C +GR     +L C +    + AD + Y  L+  F K G  N A+ ++ 
Sbjct: 575 VVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQ 634

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            M+  G  PD  +   +L  L    ++  A+ + + + M+
Sbjct: 635 EMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDLQMS 674



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 81/342 (23%), Positives = 151/342 (44%), Gaps = 2/342 (0%)

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           L  GF  ++ L+ A  L+  MV++   P+V+ +  L+   +  +   +  S    +E + 
Sbjct: 48  LRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQ 107

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
              D+   N+LI C         AL  +  + +L   PD  TF +LL  +C+  R S   
Sbjct: 108 IPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEAL 167

Query: 381 KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
            L   +    ++V +  L++  C+ G   +AV L + M++ G  P+  ++  ++ G+C  
Sbjct: 168 DLFHQM-CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKI 226

Query: 441 RKIDEAINVYQGI-VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
                A+N+ + +  M++   N  +++AI+D L + GR   A  L+     +    D+ +
Sbjct: 227 GDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFT 286

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           Y   I G    GR  EA  L  +M    + PN  TY  ++ ++ KER     + L  +++
Sbjct: 287 YNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEML 346

Query: 560 DARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
              I  +  T   +     K +   +A +    M   G  PD
Sbjct: 347 PRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPD 388


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 109/457 (23%), Positives = 215/457 (47%), Gaps = 7/457 (1%)

Query: 100 FETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNI 159
           F+   G+  ++   G      T+   +  Y     +  V++  +EM   G  P+ +    
Sbjct: 250 FDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGS 309

Query: 160 VMDVLFKIGRVDLG----IKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG 215
           +++ L K GR          ++++   P   ++ I +        +S +   + +MV  G
Sbjct: 310 LLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENG 369

Query: 216 FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAG 275
             P+  +F I  + + K G I +A  +   M   G S +V  +  LID   +L R+D A 
Sbjct: 370 LSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAE 429

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
             + +M+  G +PN+V + SL+ G      +  A   +  +  +G  P+ VF N LI  L
Sbjct: 430 VKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNL 489

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADL 392
             +G   +   + D +  + + PD++++  L+S  CL+GR     K+  G+    +    
Sbjct: 490 CNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTE 549

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           V YN LL  +C A   + A  L+  ML KG TP   ++  +L GL   ++  EA  +Y  
Sbjct: 550 VTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLN 609

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           ++ +    + + +  I++ L ++    +A ++F+    +   L+++++T+ I  LL+GGR
Sbjct: 610 MINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGR 669

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
            E+A  L++ +    + PN  TYR++  +  +E +++
Sbjct: 670 KEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLE 706



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 133/594 (22%), Positives = 246/594 (41%), Gaps = 52/594 (8%)

Query: 101 ETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF----DEMGRFGFTPNTFA 156
           E +  ++  +  +GC+    ++ + L+     +     LE      D+ GR    PN  +
Sbjct: 143 EAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGR-RCPPNVVS 201

Query: 157 RNIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            +IV++  F  G+VD    L ++++     P+ +++   +  LCK       + V   M+
Sbjct: 202 YSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMI 261

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
             GF PN   +  L++ +  +G+  E  Q+L  M   G       +  L++   +  R  
Sbjct: 262 DNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCR 321

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A + ++ M++ G  P V TY  LI G+      S   SFLD++   G +PD    N+  
Sbjct: 322 EARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFF 381

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF-------------SLL 379
              +K G  D A+D+++ + +  L P+   + +L+  +C  GR               + 
Sbjct: 382 SAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVT 441

Query: 380 PKLV---------CGLE----------------VEADLVVYNALLSYFCKAGFPNQAVKL 414
           P +V         C ++                +  + V +N L+   C  G   +  +L
Sbjct: 442 PNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRL 501

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
            + M   G  PD +S+  L+ G C   + DEA  V+ G+V    +     +  ++     
Sbjct: 502 IDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCS 561

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
           A R   A  LFR  + +     VV+Y   + GL +  R  EA  LY  M +     + YT
Sbjct: 562 ASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYT 621

Query: 535 YRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMC 594
           Y ++L   CK   +    ++ Q +    ++L+  T   +   + K      A++    + 
Sbjct: 622 YNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIP 681

Query: 595 NLGLIPDEMWRKLGLLSDETMTPVSL--FDGFVPCERRAGNA-NHLLLNGGVGR 645
             GL+P+ +  +  L+++  +   SL  FD       + G A N  +LN  V R
Sbjct: 682 ANGLVPNVVTYR--LVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRR 733



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 92/389 (23%), Positives = 181/389 (46%), Gaps = 9/389 (2%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ- 241
           PN  +++I +   C++  + +     G++++ G+  +      LL   C   R+ EA   
Sbjct: 88  PNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDV 147

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG---CSPNVVTYTSLIK 298
           LL  M  LG      ++T+L+ G    +R + A  L   M  +    C PNVV+Y+ +I 
Sbjct: 148 LLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVIN 207

Query: 299 GFMEAKMFSIAFS-FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
           GF         ++ FL+M++  G  PD+V +  +ID L K   +D A  V+  +++    
Sbjct: 208 GFFTEGQVDKPYNLFLEMID-RGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFK 266

Query: 358 PDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKL 414
           P++YT+  L+      G++  + +++  +    ++ D   Y +LL+Y CK G   +A   
Sbjct: 267 PNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFF 326

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
           +++M+ KG  P   ++  L+ G      + E  +    +V N  + + H+         +
Sbjct: 327 FDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAK 386

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
            G   KA+ +F +        +VV+Y   I  L + GR ++A + ++QM +  V PN   
Sbjct: 387 CGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVV 446

Query: 535 YRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           +  ++   C     +  + L+ +++D  I
Sbjct: 447 FNSLVYGLCTVDKWERAEELVYEMLDQGI 475



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 87/400 (21%), Positives = 169/400 (42%), Gaps = 73/400 (18%)

Query: 122 FLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD---------- 171
           F +F   Y +  M    ++ F++M + G +PN      ++D L K+GRVD          
Sbjct: 377 FNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMI 436

Query: 172 -----------------------------LGIKVLKETQLPNFLSFNIALCNLCKLNDVS 202
                                        L  ++L +   PN + FN  +CNLC +  V 
Sbjct: 437 NEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVM 496

Query: 203 NVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLI 262
             + +I +M   G  P+   +  L++ +C  GR  EA ++   M+++G S +   +  L+
Sbjct: 497 EGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLL 556

Query: 263 DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS-FLDMLESEGH 321
            G+    R+D A  L+ +M++ G +P VVTY +++ G  + K FS A   +L+M+ S G 
Sbjct: 557 HGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINS-GT 615

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPK 381
             D+  +N++++ L K    D+A  ++  L                              
Sbjct: 616 KCDIYTYNIILNGLCKSNCVDEAFKMFQSL------------------------------ 645

Query: 382 LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
             C   ++ +++ +  ++    K G    A+ L+  +   G  P+  ++  +   L    
Sbjct: 646 --CSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEG 703

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
            ++E  +++  +  N  A N+ +  A+V RL+  G   +A
Sbjct: 704 SLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRA 743



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/344 (21%), Positives = 148/344 (43%), Gaps = 13/344 (3%)

Query: 238 EAYQLLGLMITLGTSLSVNAWTVLIDGFRRLR---RLDMAGYLWEKMVQ---NGCSPNVV 291
           +A +L   ++      SV A+  L+    R R     ++A   + +MV+   +  +PN+ 
Sbjct: 32  DALKLFDELLHHARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRECSDKVAPNLC 91

Query: 292 TYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV-YDG 350
           TY+ LI  F         F+   ++   G   D +  N L+  L       +A+DV    
Sbjct: 92  TYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLLQR 151

Query: 351 LLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV------CGLEVEADLVVYNALLSYFCK 404
           + EL  +PD+ ++  LL  +C   R     +L+       G     ++V Y+ +++ F  
Sbjct: 152 MPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFT 211

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV 464
            G  ++   L+  M+D+G  PD  ++  ++ GLC A+  D A  V+Q ++ N    N + 
Sbjct: 212 EGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYT 271

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
           +  ++   +  G+  + +Q+           D  +Y   +  L + GR  EA   +  M 
Sbjct: 272 YNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMI 331

Query: 525 HIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
              + P   TY +++  +  +  +  +   L  +++  +  D+H
Sbjct: 332 RKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHH 375



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 122/276 (44%), Gaps = 19/276 (6%)

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTV----CLSGR---FSLLPKLV--CGLEVEADL 392
           DDAL ++D LL          F  LL+ V    C S      S   ++V  C  +V  +L
Sbjct: 31  DDALKLFDELLHHARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRECSDKVAPNL 90

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
             Y+ L+  FC+ G        +  +L  G+  D+ +   LL+GLC  +++ EA++V   
Sbjct: 91  CTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDV--- 147

Query: 453 IVMNNPAV----NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE---KYPLDVVSYTVAIR 505
           ++   P +    +   +T ++  L    R  +A++L      +   + P +VVSY++ I 
Sbjct: 148 LLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVIN 207

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
           G    G+ ++ Y L+ +M    +PP+  TY  ++   CK +     + + Q +ID   + 
Sbjct: 208 GFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKP 267

Query: 566 DYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           + +T   L             V  L EM   GL PD
Sbjct: 268 NNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPD 303


>gi|326531238|dbj|BAK04970.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 660

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 136/567 (23%), Positives = 237/567 (41%), Gaps = 39/567 (6%)

Query: 42  QDFPIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFE 101
           +   I L P +V+  +        A+ F+ W   +  + H   +  +++S++  + G F 
Sbjct: 79  ERLDIELDPFVVNLVVRGLSDSETAVRFYWWAESRPGFDHSQFAIAYIVSLLF-VDGNFA 137

Query: 102 TVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEM-----GRFGFTPNTFA 156
            +   +G +   G  +    + + L  Y R   +  V+  FDEM       FG   N + 
Sbjct: 138 LLSEFLGTVRSQGVALHRSLYRILLSGYVRAGKFDSVIGTFDEMVMSGCREFGIDYNRYI 197

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
             ++ +  F +     G+ + K   L  F +++  +  LC+ N +  V++++  M R GF
Sbjct: 198 GVLIKNCCFDLVEKYYGMALSKGLCLTPF-TYSRWISALCQSNRIELVEELLADMDRFGF 256

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
            P++    I ++C CK  R+ +A Q++  M   GT   V  +T ++      +R   A  
Sbjct: 257 SPDIWACNIYIDCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVG 316

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           LWE+MV+ G  P+VV   +LI G  +      AF     + S      +  +N LI    
Sbjct: 317 LWEEMVKMGLKPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFW 376

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYN 396
           + GS D A                YT  S + T   +G              E  +V YN
Sbjct: 377 RAGSIDKA----------------YTIISFMRT---NG-------------CEPGVVTYN 404

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            LL+++C  G   +A  L   M   G  PD YS+  LL+GLC   ++D+A       +  
Sbjct: 405 ILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEV 464

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
               +      ++D   +  +   A++LF+    +    D V+Y   I GL   G    A
Sbjct: 465 GGFCDIVSCNILIDAFCKVKKVKSALELFKEMDYKGMQADAVTYGTLINGLFSVGYYNLA 524

Query: 517 YILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKF 576
             L+ QM    + PN   Y +ML   CK  ++K  +++   +I   I  D  T   L  +
Sbjct: 525 EELFEQMLKAQIDPNVNLYNIMLHHLCKVGDLKRAQKIFLHMIQKEILPDIVTYNTLIYW 584

Query: 577 IFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           + K   +  A++   +M   G+ PD +
Sbjct: 585 LGKNSRAMEALDLFKDMRTKGVEPDSL 611



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 110/441 (24%), Positives = 196/441 (44%), Gaps = 36/441 (8%)

Query: 137 MVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIAL 192
           +V E   +M RFGF+P+ +A NI +D L K  R+   ++++++ +    +P+ +++   +
Sbjct: 243 LVEELLADMDRFGFSPDIWACNIYIDCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVV 302

Query: 193 CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
             LC     S    +   MV+ G  P+V     L+   CK  ++ EA++L   M++L   
Sbjct: 303 GCLCNNKRFSEAVGLWEEMVKMGLKPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIE 362

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
           LSV+ +  LI GF R   +D A  +   M  NGC P VVTY  L+  +    M   A + 
Sbjct: 363 LSVSIYNALISGFWRAGSIDKAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENL 422

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
           +  +E+ G  PD   +N L+  L K    D A       +E+        FC        
Sbjct: 423 ITKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVG------GFC-------- 468

Query: 373 SGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
                             D+V  N L+  FCK      A++L+  M  KG   D  ++  
Sbjct: 469 ------------------DIVSCNILIDAFCKVKKVKSALELFKEMDYKGMQADAVTYGT 510

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           L+ GL      + A  +++ ++      N +++  ++  L + G   +A ++F   I ++
Sbjct: 511 LINGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCKVGDLKRAQKIFLHMIQKE 570

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVK 552
              D+V+Y   I  L +  R  EA  L+  M+   V P++ T++ ++     E    +  
Sbjct: 571 ILPDIVTYNTLIYWLGKNSRAMEALDLFKDMRTKGVEPDSLTFKYLINGLLDEGRSTLAY 630

Query: 553 RLLQDVIDARIELDYHTSIRL 573
            + + +++  I LD   S RL
Sbjct: 631 EVWEYMMENGIILDREVSERL 651



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 42/197 (21%), Positives = 86/197 (43%), Gaps = 5/197 (2%)

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKL 198
           D M   GF  +  + NI++D   K+ +V   +++ KE        + +++   +  L  +
Sbjct: 460 DHMEVGGFC-DIVSCNILIDAFCKVKKVKSALELFKEMDYKGMQADAVTYGTLINGLFSV 518

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
              +  +++   M++    PNV ++ I+L+  CK+G +  A ++   MI       +  +
Sbjct: 519 GYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCKVGDLKRAQKIFLHMIQKEILPDIVTY 578

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
             LI    +  R   A  L++ M   G  P+ +T+  LI G ++    ++A+   + +  
Sbjct: 579 NTLIYWLGKNSRAMEALDLFKDMRTKGVEPDSLTFKYLINGLLDEGRSTLAYEVWEYMME 638

Query: 319 EGHAPDLVFHNVLIDCL 335
            G   D      LI  L
Sbjct: 639 NGIILDREVSERLISVL 655


>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
          Length = 1098

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 115/479 (24%), Positives = 227/479 (47%), Gaps = 19/479 (3%)

Query: 134 MYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP----NFLSFN 189
           ++  ++E + E   F F+  +F  ++++  L   G++D  ++V  E +      +  S N
Sbjct: 158 LFPHLVEVYKE---FSFSAASF--DLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCN 212

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
             L  L +  D+     V   M R G  P+     I+   +CK+  +  A + +  M  +
Sbjct: 213 SILNRLAQTGDLGATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKM 272

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           G  +++ A+  +++G+  + + + A  + + +   G SPN+VTYT L+KG+   K    A
Sbjct: 273 GVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEA 332

Query: 310 FSFLDMLESEGH-APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
              +  +        D      +I+   +MG  +DA  + + +++ +L  + + +  +++
Sbjct: 333 EGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMIN 392

Query: 369 TVCLSGRF----SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
             C  GR     ++L ++  G+ V  D   YN+L+  +CK G  N+A + YNTML  GF 
Sbjct: 393 GYCKLGRMVEAHNILHEMT-GVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFA 451

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
               ++  LL+G C    ID+A+ ++  ++    A N    + ++D   ++G+  KA+ L
Sbjct: 452 ATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNL 511

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
           ++  +      +  ++   I GL +  R  EA  L  +MK    PP+  TYR +   +CK
Sbjct: 512 WKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCK 571

Query: 545 ERNIKMVKRLLQDVIDARIE--LDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
             ++    R+L ++ +      +++  S+    FI K H   + +  L EM N GL P+
Sbjct: 572 IGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDI--LFEMSNRGLSPN 628



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 99/431 (22%), Positives = 204/431 (47%), Gaps = 14/431 (3%)

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLND 200
           M + G  PN  + + ++D  FK G+ +  + + KET       N  +FN  +  LCK+  
Sbjct: 480 MLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIER 539

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
           +   ++++  M +    P++  +  L + +CK+G +  A ++L  +  LG + ++  +  
Sbjct: 540 MPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNS 599

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS-FLDMLESE 319
           LI G    ++      +  +M   G SPN V Y +LI G+ +      A++ +L+M+E +
Sbjct: 600 LITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIE-K 658

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS-GRFSL 378
           G  P+L   + L+ C  + G +D+A  V   L+   ++PD       +S   L  G+ + 
Sbjct: 659 GLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPD-------ISAPRLEIGKVAN 711

Query: 379 LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
               V G    +  +++N ++   CK G    A  L   + DKGF  DN+++  L+ G  
Sbjct: 712 FIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCS 771

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
            +  +D A ++   ++      N   + +++  L ++G   +A+ LF++   +    + +
Sbjct: 772 ASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAI 831

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           +Y   I    + G   EA+ L  +M    + P  +TY +++   C +  ++   +LL  +
Sbjct: 832 TYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQM 891

Query: 559 IDARIELDYHT 569
           I+  ++ +Y T
Sbjct: 892 IENNVDPNYVT 902



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 110/531 (20%), Positives = 223/531 (41%), Gaps = 20/531 (3%)

Query: 91  SVVTRL--TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRF 148
           S++ RL  TG       +  ++ R G +    T  +  + Y + +     LE  +EM + 
Sbjct: 213 SILNRLAQTGDLGATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKM 272

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNV 204
           G   N  A + VM+   ++G+ +   ++L         PN +++ + +   C   ++   
Sbjct: 273 GVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEA 332

Query: 205 KDVIGMMVR-KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLID 263
           + V+  + + K    +  +F  ++N +C+MGR+ +A +LL  M+     +++  + ++I+
Sbjct: 333 EGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMIN 392

Query: 264 GFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP 323
           G+ +L R+  A  +  +M   G  P+  +Y SL+ G+ +  + + AF   + +   G A 
Sbjct: 393 GYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAA 452

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL---LP 380
             + +N L+     +GS DDAL ++  +L+  + P+  +  +LL     SG+      L 
Sbjct: 453 TTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLW 512

Query: 381 KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
           K      +  +   +N +++  CK     +A +L + M      PD  ++  L  G C  
Sbjct: 513 KETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKI 572

Query: 441 RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSY 500
             +D A  +   +     A       +++     A +  K   +           + V+Y
Sbjct: 573 GDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAY 632

Query: 501 TVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ---- 556
              I G  + G    AY LY +M    + PN +    ++  F ++        +LQ    
Sbjct: 633 GALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVG 692

Query: 557 -----DVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLV-EMCNLGLIPD 601
                D+   R+E+    +   T      HS+    N ++  +C LG I D
Sbjct: 693 TDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIED 743



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 115/254 (45%), Gaps = 30/254 (11%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVD---------LGIKVLKETQLP--------NFL 186
           EM   G  PN F  + ++   ++ G+ D         +G  ++ +   P        NF+
Sbjct: 654 EMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFI 713

Query: 187 S-------------FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKM 233
                         +NI +  LCKL  + + K+++  +  KGF  +   +  L++     
Sbjct: 714 DTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSAS 773

Query: 234 GRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTY 293
           G +  A+ L   M+++G + ++  +  LI G  +   L  A  L++K+   G SPN +TY
Sbjct: 774 GFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITY 833

Query: 294 TSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE 353
            +LI    +    + AF     +  EG  P +  +++LI+ L   G  ++A+ + D ++E
Sbjct: 834 NTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIE 893

Query: 354 LKLVPDSYTFCSLL 367
             + P+  T+ +L+
Sbjct: 894 NNVDPNYVTYWTLI 907



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 86/171 (50%), Gaps = 6/171 (3%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-----PNFLSFNIALCNLCKLNDVSN 203
           GF  + F  + ++      G VD+    L++T L     PN +++N  +  LCK  ++S 
Sbjct: 755 GFVADNFTYSSLIHGCSASGFVDVAFD-LRDTMLSVGLTPNIVTYNSLIYGLCKSGELSR 813

Query: 204 VKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLID 263
              +   +  KG  PN   +  L++  CK G I EA++L   MI  G   +V  +++LI+
Sbjct: 814 AVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILIN 873

Query: 264 GFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           G      ++ A  L ++M++N   PN VTY +LI+G++  +   +    LD
Sbjct: 874 GLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVRCESVDVPIMPLD 924



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 83/189 (43%), Gaps = 4/189 (2%)

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNL---CKLNDVSNVK-DVIGMMVR 213
           NIV+  L K+GR++    +L + +   F++ N    +L   C  +   +V  D+   M+ 
Sbjct: 729 NIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLS 788

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G  PN+  +  L+   CK G ++ A  L   + T G S +   +  LID   +   +  
Sbjct: 789 VGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITE 848

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L ++M++ G  P V TY+ LI G         A   LD +      P+ V +  LI 
Sbjct: 849 AFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQ 908

Query: 334 CLSKMGSYD 342
              +  S D
Sbjct: 909 GYVRCESVD 917


>gi|6723418|emb|CAB66911.1| putative protein [Arabidopsis thaliana]
          Length = 1184

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 128/525 (24%), Positives = 235/525 (44%), Gaps = 45/525 (8%)

Query: 46  IILAPHIVHSTLLNC-PSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVR 104
           I L P ++   L  C  +  +   FF+W  KQ  YFH  +    M+ +++++  +F  V 
Sbjct: 93  IDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMR-QFGAVW 151

Query: 105 GIVGELARVGC-VIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDV 163
           G++ E+ +    +I+ + F++ +R +    M    +E  DEM ++G  P+ +    ++D 
Sbjct: 152 GLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDA 211

Query: 164 LFKIGRVDLGIKV---LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV 220
           L K G V    KV   ++E   PN   F   L   C+   +   K+V+  M   G  P++
Sbjct: 212 LCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDI 271

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF-RRLRRLDMAGYLWE 279
            +F  LL+ +   G++A+AY L+  M   G   +VN +TVLI    R  +R+D A  ++ 
Sbjct: 272 VVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFV 331

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
           +M + GC  ++VTYT+LI GF +  M    +S LD +  +G  P  V +  ++    K  
Sbjct: 332 EMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKE 391

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALL 399
            +++ L++ + +      P                                DL++YN ++
Sbjct: 392 QFEECLELIEKMKRRGCHP--------------------------------DLLIYNVVI 419

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN-- 457
              CK G   +AV+L+N M   G +P   +FV ++ G      + EA N ++ +V     
Sbjct: 420 RLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIF 479

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY---PLDVVSYTVAIRGLLEGGRTE 514
            A       ++++ L+   +   A  ++   I  K     L+V ++T+ I  L   G  +
Sbjct: 480 SAPQYGTLKSLLNNLVRDDKLEMAKDVW-SCISNKTSSCELNVSAWTIWIHALYAKGHVK 538

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           EA      M  + + P   TY  ++    K  N  +   + + V+
Sbjct: 539 EACSYCLDMMEMDLMPQPNTYAKLMKGLNKLYNRTIAAEITEKVV 583


>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 947

 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 117/471 (24%), Positives = 225/471 (47%), Gaps = 29/471 (6%)

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           +  E+ RVG      T    L+   R   +   L  +  M + G TP+  +   ++D+LF
Sbjct: 416 VYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLF 475

Query: 166 KIGR----VDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
           K+G     + L   +L      +  +FN  +   CK+  +   ++    M   GF P+  
Sbjct: 476 KMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGV 535

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            +  L++ +CK+G + EA+++   M       S+  +  LI G  + ++      L  +M
Sbjct: 536 TYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEM 595

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFS-FLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
              G SPNVVTY +LI G+ +      AF+ + DM+E +G AP+++  + ++  L ++G 
Sbjct: 596 CLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIE-KGFAPNVIICSKIVSSLYRLGR 654

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSL-------------LSTVCLSGRFSLLPKLVCGLE 387
            D+A  +   ++ L +  D   F  L               T+  S +   LP       
Sbjct: 655 IDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLP------- 707

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
              + VVYN  ++  CK+G  + A K+++++L +GF+PDN+++  L+ G   A  +++A 
Sbjct: 708 ---NSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAF 764

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
           ++   ++    A N   + A+++ L ++G   +A +LF +  ++    +V+SY + I G 
Sbjct: 765 SLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGY 824

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
            + G T EA  L ++M    + P+  TY  ++  FCK+ ++     LL ++
Sbjct: 825 CKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEM 875



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 146/589 (24%), Positives = 275/589 (46%), Gaps = 36/589 (6%)

Query: 28  IHQISSPKVCATTH--QDFPIILAPHIVHSTLLNCPSDLIA-LSFFIWCAKQRDYFHDVQ 84
           I +IS   V    H  +D     + +I+ S LL    + IA L FF   +KQ ++  +V 
Sbjct: 36  IDRISRLLVLGRYHALKDLNFQFSDYILDSVLLKLKFNPIASLHFFKLASKQSNFRPNVN 95

Query: 85  SFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDE 144
           S   ++ +++R    ++  R  + EL     V  ++        Y    ++  ++  F++
Sbjct: 96  SHCKLVHILSR-ARMYDETRSYLNEL-----VTPSKNN------YSSLVVWNELVRVFED 143

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCKLND 200
              F F+P  F  ++++ +  + G +   + V     K   +P+  S N  L +L +  +
Sbjct: 144 ---FKFSPTVF--DMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGE 198

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
            SN   V   + R G  P+V    I++N +CK G +  A   +  M  LG  L+V  +  
Sbjct: 199 SSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNS 258

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF-MEAKMFSIAFSFLDMLESE 319
           LIDG   +  ++ A  + + M + G   N VT T LIKG+  + K+        +M  SE
Sbjct: 259 LIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSE 318

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
           G   D   + VLID   ++   DDA+ + D +L + L  + +   +L++  C +G+ S  
Sbjct: 319 GMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEA 378

Query: 380 PKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
            +L+  +   ++E +   Y+ L+  FC+ G   +A+ +YN ML  G   +  +   LL+G
Sbjct: 379 ERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKG 438

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
           LC     ++A++V+  ++      +   +  ++D L + G   +A+ L+   +   Y   
Sbjct: 439 LCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRS 498

Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK----ERNIKMVK 552
             ++   I G  +  +  EA   +++MK +   P+  TYR ++  +CK    E   K+ +
Sbjct: 499 TYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKE 558

Query: 553 RLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           ++ ++ I   IEL Y++   L   +FK   +   ++ L EMC  GL P+
Sbjct: 559 KMEKEAILPSIEL-YNS---LIGGLFKSKKTREVMDLLSEMCLKGLSPN 603



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 123/562 (21%), Positives = 244/562 (43%), Gaps = 49/562 (8%)

Query: 61  PSDLIALSFFIWCAKQR---DYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVI 117
           PS     S  +W    R   D+      FD ++ +     G  +    +   + ++GCV 
Sbjct: 123 PSKNNYSSLVVWNELVRVFEDFKFSPTVFDMILKIYCE-KGMIKNALHVFDNMGKLGCVP 181

Query: 118 KAQTF-LLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV 176
             ++   L   +  +GE    +L  +D + R G  P+ F  +I+++   K G V++ +  
Sbjct: 182 SLRSCNRLLSSLVRKGESSNAIL-VYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDF 240

Query: 177 LKETQLPNF----LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCK 232
           +KE     F    +++N  +     + D+   + V+ +M  +G   N     +L+  +C+
Sbjct: 241 VKEMDYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCR 300

Query: 233 MGRIAEAYQLLGLMI-TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG------ 285
             ++ EA ++L  M  + G  L   A+ VLIDG+ R+ ++D A  L ++M+  G      
Sbjct: 301 QCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLF 360

Query: 286 -CS----------------------------PNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
            C+                            P   +Y++L+ GF    + + A S  + +
Sbjct: 361 ICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEM 420

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
              G   ++V HN L+  L ++G+++DAL V+  +L+  + PD  ++C+LL  +   G F
Sbjct: 421 LRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEF 480

Query: 377 SLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
                L   +           +N +++ FCK     +A + +N M + GF PD  ++  L
Sbjct: 481 FRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTL 540

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           + G C    ++EA  V + +       +  ++ +++  L ++ +  + + L     ++  
Sbjct: 541 IDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGL 600

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
             +VV+Y   I G  + GR ++A+  Y  M      PN      ++ S  +   I     
Sbjct: 601 SPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANM 660

Query: 554 LLQDVIDARIELDYHTSIRLTK 575
           LLQ +++  + LD+    RL K
Sbjct: 661 LLQKMVNLDVFLDHGYFDRLHK 682



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/281 (23%), Positives = 119/281 (42%), Gaps = 39/281 (13%)

Query: 141 AFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----------------------- 177
           A+ +M   GF PN    + ++  L+++GR+D    +L                       
Sbjct: 626 AYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADD 685

Query: 178 ----------------KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
                           K   LPN + +NIA+  LCK   V + K +   ++ +GF P+  
Sbjct: 686 GNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNF 745

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            +  L++ +   G + +A+ L   M+  G + ++  +  LI+G  +   LD A  L++K+
Sbjct: 746 TYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKL 805

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
              G +PNV++Y  LI G+ +      A    + +  EG +P L+ ++ LI    K G  
Sbjct: 806 HLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDM 865

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL 382
             A ++ D + EL    +   F  L+      G    + KL
Sbjct: 866 GKATNLLDEMRELFADQNIAKFVKLVEGHVKCGEVKKIAKL 906



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 70/321 (21%), Positives = 141/321 (43%), Gaps = 6/321 (1%)

Query: 287 SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALD 346
           SP V  +  ++K + E  M   A    D +   G  P L   N L+  L + G   +A+ 
Sbjct: 147 SPTV--FDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAIL 204

Query: 347 VYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFC 403
           VYD +  L +VPD +T   +++  C  G  ++    V  ++    E ++V YN+L+    
Sbjct: 205 VYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCV 264

Query: 404 KAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV-NA 462
             G   +A  +   M ++G   +  +   L++G C   K++EA  V + +  +   V + 
Sbjct: 265 SIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDE 324

Query: 463 HVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQ 522
           + +  ++D      +   A++L    +     +++      I G  + G+  EA  L  +
Sbjct: 325 YAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMR 384

Query: 523 MKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHS 582
           M    + P +Y+Y  ++  FC+E  +     +  +++   I+ +  T   L K + +  +
Sbjct: 385 MVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGA 444

Query: 583 SSSAVNQLVEMCNLGLIPDEM 603
              A++    M   G+ PDE+
Sbjct: 445 FEDALHVWHLMLKRGVTPDEV 465



 Score = 40.4 bits (93), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 63/135 (46%), Gaps = 5/135 (3%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGR----VDLGIKVLKETQLPNFLSFNIALCNLCK 197
           FD++   G  PN  + NI++D   K G     +DL  K+LKE   P+ ++++  +   CK
Sbjct: 802 FDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCK 861

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM-ITLGTSLSVN 256
             D+    +++  M       N+  F  L+    K G + +  +L  +M IT+  +  ++
Sbjct: 862 QGDMGKATNLLDEMRELFADQNIAKFVKLVEGHVKCGEVKKIAKLHNMMHITIPCAGVIS 921

Query: 257 AWTVLIDGFRRLRRL 271
              + +D F   + +
Sbjct: 922 HKQMELDVFSNAKEM 936


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 116/432 (26%), Positives = 198/432 (45%), Gaps = 15/432 (3%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFD---EMGRFGFTP 152
           +   F+  R +  ++ R GC     T+ + +    +    GM+ EA D   +M   G  P
Sbjct: 57  MANSFDDARELFADMNRRGCPPSPVTYNVIIDASCK---RGMLEEACDLIKKMIEDGHVP 113

Query: 153 NTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVI 208
           +    N VMD L K GRV+  + +  E +     PN  S N  +  LC+ + +     V 
Sbjct: 114 DVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVF 173

Query: 209 GMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRL 268
             M  +   P+   + IL++   K G++ EAY+L   M+  G + S   + V+I G    
Sbjct: 174 HEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLA 233

Query: 269 RRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH 328
             LD A  L++ M   GC P+  T+  LI    +      AF  L  +  +GH PD+V +
Sbjct: 234 YTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTY 293

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF----SLLPKLVC 384
           + LI  L  +   DDA  + + +++ +  P   T  +L+  +C +GR      +L  +V 
Sbjct: 294 STLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVS 353

Query: 385 GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
             +   D+V YN L+   C+AG   +A +L + M+ +G  P+  ++  L+ GLC A ++ 
Sbjct: 354 SGQ-SPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLP 412

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
           EA  V+  +  +  A N   +TA++     AG+    ++LF   +      D V Y    
Sbjct: 413 EACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLA 472

Query: 505 RGLLEGGRTEEA 516
             L + GR+  A
Sbjct: 473 AELCKSGRSARA 484



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/407 (24%), Positives = 192/407 (47%), Gaps = 7/407 (1%)

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLND 200
           M     +P++++  I++D L K G++    DL  K+L     P+ +++   +  LC  N 
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
             + +++   M R+G  P+   + ++++  CK G + EA  L+  MI  G    V  +  
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           ++DG  +  R++ A  L+ +M + GC+PN  ++ ++I G  +      A      +E+  
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
             PD   + +LID L+K G  ++A  ++  +L+  + P + T+  ++  +CL+       
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 381 KLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
           +L   +  +        +N L+   CK G  ++A +L   M D G  PD  ++  L+ GL
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
           C   ++D+A ++ + +V             ++  L +AGR  +A ++    +      DV
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
           V+Y   + G    G+TE A  L S M    + PN  TY  ++   CK
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCK 407



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 118/463 (25%), Positives = 220/463 (47%), Gaps = 20/463 (4%)

Query: 79  YFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMV 138
           +  DV +++ ++  + + +GR E    +  E+ R+GC    ++    +    +       
Sbjct: 111 HVPDVVTYNTVMDGLCK-SGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQA 169

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCN 194
            + F EM      P++++  I++D L K G+++   K+    L     P+ +++N+ +  
Sbjct: 170 CQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHG 229

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           +C    +    ++   M  KG  P+   F IL++  CK G++ EA++LL  M   G    
Sbjct: 230 MCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPD 289

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           V  ++ LI G   + R+D A +L E MV+  C P VVT  +LI G  +A     A   LD
Sbjct: 290 VVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLD 349

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            + S G +PD+V +N L+    + G  + A ++   ++   L P+  T+ +L+S +C + 
Sbjct: 350 AMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKAN 409

Query: 375 RFSLLPKLVCGLEVE-------ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           R   LP+  CG+  +        +L  Y AL+  FC AG  +  +KL+  M+  G +PD+
Sbjct: 410 R---LPE-ACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDH 465

Query: 428 YSFVGLLRGLCGARKIDEAINVYQG--IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
             +  L   LC + +   A+ + +     + + A    V+   VD L++AG+   A+  F
Sbjct: 466 VVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLDAGKMEMALG-F 524

Query: 486 RRAIVEKYPLDVVSYTVA-IRGLLEGGRTEEAYILYSQMKHIA 527
            R +V    L       + + GL + G+  EA  +  ++  +A
Sbjct: 525 VRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMDLA 567



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/394 (24%), Positives = 178/394 (45%), Gaps = 3/394 (0%)

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M  +   P+   + IL++   K G++ +A  L   ++  G + S  A+T LI G      
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
            D A  L+  M + GC P+ VTY  +I    +  M   A   +  +  +GH PD+V +N 
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE--- 387
           ++D L K G  ++AL +++ +  L   P+  +  +++  +C   +     ++   +E   
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
           +  D   Y  L+    KAG  N+A KL+  MLD G TP   ++  ++ G+C A  +DEA+
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            +++ +       +      ++D   + G+  +A +L +R   + +  DVV+Y+  I GL
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
               R ++A  L   M      P   T   ++   CK   IK  + +L  ++ +    D 
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360

Query: 568 HTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            T   L     +   +  A   L +M   GL P+
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPN 394


>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
 gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
          Length = 734

 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 113/463 (24%), Positives = 219/463 (47%), Gaps = 11/463 (2%)

Query: 94  TRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPN 153
            R     E +R +  +  R  C     T+   +    + +++      F +M   G  PN
Sbjct: 183 NRAEEALELLRMMANDHGR-SCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPN 241

Query: 154 TFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIG 209
               N ++     IG+    +++L++       P+  ++   L  LC L+++ +  D   
Sbjct: 242 NDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLD--- 298

Query: 210 MMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLR 269
           +MV  G  P+  +F I  + + K G I +A  +   M   G S +V  +  LID   +L 
Sbjct: 299 LMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLG 358

Query: 270 RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHN 329
           R+D A   + +M+  G +PN+V + SL+ G      +  A   +  +  +G  P+ VF N
Sbjct: 359 RVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFN 418

Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL--- 386
            LI  L  +G   +   + D +  + + PD++++  L+S  CL+GR     K+  G+   
Sbjct: 419 TLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSI 478

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
            +    V YN LL  +C A   + A  L+  ML KG TP   ++  +L GL   ++  EA
Sbjct: 479 GLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEA 538

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
             +Y  ++ +    + + +  I++ L ++    +A ++F+    +   L+++++T+ I  
Sbjct: 539 KELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGA 598

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
           LL+GGR E+A  L++ +    + PN  TYR++  +  +E +++
Sbjct: 599 LLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLE 641



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 132/570 (23%), Positives = 243/570 (42%), Gaps = 35/570 (6%)

Query: 106 IVGELARVGCVIKA-QTFLLFLRIYWR---------------GEMYGMVLEAF-DEMGRF 148
           ++G L R+G +  +  TF L L+  WR               G+  G  ++     M   
Sbjct: 104 LIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAMDVLLQRMPEL 163

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLK-------ETQLPNFLSFNIALCNLCKLNDV 201
           G TP+T + +I++       R +  +++L+        +  PN +++   +  LCK    
Sbjct: 164 GCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQLF 223

Query: 202 SNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVL 261
              + V   M+  G  PN   +  L++ +  +G+  E  Q+L  M   G       +  L
Sbjct: 224 DRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSL 283

Query: 262 IDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH 321
           ++    L   +M  +L + MV+NG SP+   +      + +  M   A    + +   G 
Sbjct: 284 LNYLCALS--EMHSFL-DLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGL 340

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPK 381
           +P++V +  LID L K+G  DDA   ++ ++   + P+   F SL+  +C   ++    +
Sbjct: 341 SPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEE 400

Query: 382 LVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
           LV  +  +    + V +N L+   C  G   +  +L + M   G  PD +S+  L+ G C
Sbjct: 401 LVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYC 460

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
            A + DEA  V+ G+V    +     +  ++     A R   A  LFR  + +     VV
Sbjct: 461 LAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVV 520

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           +Y   + GL +  R  EA  LY  M +     + YTY ++L   CK   +    ++ Q +
Sbjct: 521 TYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSL 580

Query: 559 IDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTPV 618
               ++L+  T   +   + K      A++    +   GL+P+ +  +  L+++  +   
Sbjct: 581 CSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYR--LVAENLIEEG 638

Query: 619 SL--FDGFVPCERRAGNA-NHLLLNGGVGR 645
           SL  FD       + G A N  +LN  V R
Sbjct: 639 SLEEFDSLFSAMEKNGTAPNSQMLNALVRR 668



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 90/365 (24%), Positives = 169/365 (46%), Gaps = 4/365 (1%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ- 241
           PN  +++I +  LC++  + +     G++++ G+  N  +   LL   C   R+ EA   
Sbjct: 96  PNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAMDV 155

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN---GCSPNVVTYTSLIK 298
           LL  M  LG +    ++++L+ GF    R + A  L   M  +    C PNVVTYT++I 
Sbjct: 156 LLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVID 215

Query: 299 GFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP 358
           G  +A++F  A      +   G  P+   +N LI     +G + + + + + +    L P
Sbjct: 216 GLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKP 275

Query: 359 DSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           D YT+ SLL+ +C          L+    +  D  ++N   S + K G  ++A+ ++N M
Sbjct: 276 DCYTYGSLLNYLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKM 335

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
              G +P+  ++  L+  LC   ++D+A   +  ++      N  V  ++V  L    + 
Sbjct: 336 RQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKW 395

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            +A +L    + +    + V +   I  L   GR  E   L   M+H+ V P+A++Y  +
Sbjct: 396 ERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPL 455

Query: 539 LLSFC 543
           +  +C
Sbjct: 456 ISGYC 460



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/400 (21%), Positives = 169/400 (42%), Gaps = 73/400 (18%)

Query: 122 FLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD---------- 171
           F +F   Y +  M    ++ F++M + G +PN      ++D L K+GRVD          
Sbjct: 312 FNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMI 371

Query: 172 -----------------------------LGIKVLKETQLPNFLSFNIALCNLCKLNDVS 202
                                        L  ++L +   PN + FN  +CNLC +  V 
Sbjct: 372 NEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVM 431

Query: 203 NVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLI 262
             + +I +M   G  P+   +  L++ +C  GR  EA ++   M+++G S +   +  L+
Sbjct: 432 EGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLL 491

Query: 263 DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS-FLDMLESEGH 321
            G+    R+D A  L+ +M++ G +P VVTY +++ G  + K FS A   +L+M+ S G 
Sbjct: 492 HGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINS-GT 550

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPK 381
             D+  +N++++ L K    D+A  ++  L                              
Sbjct: 551 KCDIYTYNIILNGLCKSNCVDEAFKMFQSL------------------------------ 580

Query: 382 LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
             C   ++ +++ +  ++    K G    A+ L+  +   G  P+  ++  +   L    
Sbjct: 581 --CSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEG 638

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
            ++E  +++  +  N  A N+ +  A+V RL+  G   +A
Sbjct: 639 SLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRA 678



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/234 (23%), Positives = 105/234 (44%), Gaps = 15/234 (6%)

Query: 377 SLLPKLV--CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
           SL  ++V  C ++V  +   Y+ L+   C+ G    +   +  +L  G+  ++     LL
Sbjct: 81  SLFNRMVRECSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLL 140

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA----GRCHKAIQLFRRAIV 490
           +GLC  +++ EA++V   ++   P +     T     L++      R  +A++L R    
Sbjct: 141 KGLCDGKRVGEAMDV---LLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMAN 197

Query: 491 E---KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN 547
           +     P +VV+YT  I GL +    + A  ++ QM    V PN  TY  ++  +     
Sbjct: 198 DHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGK 257

Query: 548 IKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            K V ++L+ +    ++ D +T   L  ++       S ++ +VE    GL PD
Sbjct: 258 WKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDLMVEN---GLSPD 308



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 59/304 (19%), Positives = 117/304 (38%), Gaps = 57/304 (18%)

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR------ 375
           AP+   +++LI CL +MG    +   +  +L+     +      LL  +C   R      
Sbjct: 95  APNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAMD 154

Query: 376 --FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD---KGFTPDNYSF 430
                +P+L C      D V Y+ LL  FC      +A++L   M +   +   P+  ++
Sbjct: 155 VLLQRMPELGC----TPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTY 210

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             ++ GLC A+  D A  V+Q ++ N    N   +  ++   +  G+  + +Q+  +   
Sbjct: 211 TTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSA 270

Query: 491 EKYPLDVVSYTVAIRGL-------------LEGGRTEEAYI------------------- 518
                D  +Y   +  L             +E G + + +I                   
Sbjct: 271 RGLKPDCYTYGSLLNYLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMD 330

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
           ++++M+   + PN   Y  ++ + CK          L  V DA ++ +   +  +T  I 
Sbjct: 331 IFNKMRQHGLSPNVVNYGALIDALCK----------LGRVDDAEVKFNQMINEGVTPNIV 380

Query: 579 KFHS 582
            F+S
Sbjct: 381 VFNS 384


>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 790

 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 136/575 (23%), Positives = 252/575 (43%), Gaps = 37/575 (6%)

Query: 44  FPIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETV 103
            P I   H+     LN      AL F  W ++  ++ H+V S+  +++++       +  
Sbjct: 63  LPAITPSHVSSLFSLNLDPH-TALQFSYWISQTPNFKHNVDSYASLLTLIDHHKIVSDVP 121

Query: 104 RGIVGELARVGCVIKAQTFLL---FLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIV 160
           + IV   + + C   A   L      R   + ++  + L+ ++E+               
Sbjct: 122 KIIV---SMIKCCYSAPDALFVSDICRKMSKDDITKLSLKCYNEL--------------- 163

Query: 161 MDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
           + +L + G VD    L  ++L+E    +  +FN+ +   CK+  V   K  +  M++ G 
Sbjct: 164 LTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMIQAGL 223

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
            P+       +  +C+   +  A+++   M          ++  LI G     R+D A  
Sbjct: 224 SPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRNEV----SYNQLIHGLCEAGRIDEAVS 279

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           L+ +M  + C PNV TYT+LIKG     +   A   LD +      PDL+ +N LI    
Sbjct: 280 LFVRMKDDCCYPNVYTYTALIKGLCRKNVHK-AMGLLDEMLERNLVPDLITYNSLIAGQC 338

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLV 393
           + G  D A  +   + E  LVPD  T+   +  +C S R     +L   L    V A+++
Sbjct: 339 RAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVI 398

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
           +Y+ L+  +CK G  ++A  L+  ML K  +P+ Y+F  L+ GLC A  + EA++++  +
Sbjct: 399 MYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQM 458

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
           V        +    ++ R+++ G    A +  ++ +         +Y   I      G+ 
Sbjct: 459 VKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKV 518

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
           +EA  +  QMK   VPP+ +TY  ++ ++ K         +L+ + DA  E  +HT + L
Sbjct: 519 QEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSL 578

Query: 574 TKFIF--KFHSSSSAVNQLVEMCNLGLIP-DEMWR 605
            K +F  ++    S    +  + N G +P   MW+
Sbjct: 579 IKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWK 613



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 106/472 (22%), Positives = 200/472 (42%), Gaps = 53/472 (11%)

Query: 160 VMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN 219
           V D+  K+ + D+    LK         +N  L  L +   V  +  +   M+ +    +
Sbjct: 140 VSDICRKMSKDDITKLSLK--------CYNELLTLLARFGLVDEMNQLYTEMLEEFVSMD 191

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
           +  F +++N +CKMG + EA Q +  MI  G S      T  I G+ R + +D A  ++E
Sbjct: 192 IYTFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFE 251

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
           +M       N V+Y  LI G  EA     A S    ++ +   P++  +  LI  L +  
Sbjct: 252 EMPNR----NEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKN 307

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALL 399
            +  A+ + D +LE  LVPD                                L+ YN+L+
Sbjct: 308 VHK-AMGLLDEMLERNLVPD--------------------------------LITYNSLI 334

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
           +  C+AG  + A +L + M ++G  PD  ++   +  LC + +++EA  ++  +     +
Sbjct: 335 AGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVS 394

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            N  +++ ++D   + G+  +A  LF + + +    +  ++   I GL   G  +EA  L
Sbjct: 395 ANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSL 454

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK 579
           + QM  + + P  YT+ +++    K+ +     + LQ ++ +  +    T     +    
Sbjct: 455 FDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCS 514

Query: 580 FHSSSSAVNQLVEMCNLGLIPDEM--------WRKLGLLSDETMTPVSLFDG 623
                 A + +V+M   G+ PD+         + KLGL         S+FD 
Sbjct: 515 AGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDA 566



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 95/431 (22%), Positives = 172/431 (39%), Gaps = 38/431 (8%)

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCKLND 200
           M   G  P+       +D L K  RV+   ++     +E    N + +++ +   CK+  
Sbjct: 353 MKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGK 412

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
           V     +   M+ K   PN   F  L++  C  G + EA  L   M+ +G   +V  + +
Sbjct: 413 VDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNI 472

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           LI    +    D A    +KM+ +G  P   TY + I+ +  A     A   +  ++ EG
Sbjct: 473 LIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEG 532

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
             PD   +  LI    K+G    A DV   + +    P  +TF SL+  +    R+ +  
Sbjct: 533 VPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQL-FDKRYVVEK 591

Query: 381 KLVCGLE----------------VEADLVV-----------------YNALLSYFCKAGF 407
               G+E                +E D+V+                 Y  L+S  CK   
Sbjct: 592 SGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVEN 651

Query: 408 PNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTA 467
              A+KL + M  +G +P    F  ++   C  +K  EA N+ + ++ +  +        
Sbjct: 652 LGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKT 711

Query: 468 IVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIA 527
           ++  L E G   +   +F++     Y  D +++ + I G+L+ G  EE   L+ +M+   
Sbjct: 712 LICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNG 771

Query: 528 VPPNAYTYRVM 538
              +  TY ++
Sbjct: 772 CNFSPRTYSIL 782



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/372 (20%), Positives = 144/372 (38%), Gaps = 38/372 (10%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G+ +    +  ++    C   A TF   +            L  FD+M + G  P  +  
Sbjct: 411 GKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTF 470

Query: 158 NIVMDVLFKIGRVDLGIKVLKET----QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           NI++  + K G  D   K L++     + P   ++N  +   C    V   +D++  M  
Sbjct: 471 NILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKE 530

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLI----------- 262
           +G  P+   +  L+  + K+G    A+ +L  M       S + +  LI           
Sbjct: 531 EGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVE 590

Query: 263 ------------------DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
                                 ++   D+   L+E+M ++GC+P+   Y  LI G  + +
Sbjct: 591 KSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVE 650

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
              IA   LD ++ EG +P  +  N +I C  K+  Y +A ++ + ++     P      
Sbjct: 651 NLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCK 710

Query: 365 SLLSTVCLSG---RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
           +L+  +   G   R + + K + G     D + +  L+    K G   +  +L+  M   
Sbjct: 711 TLICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKN 770

Query: 422 G--FTPDNYSFV 431
           G  F+P  YS +
Sbjct: 771 GCNFSPRTYSIL 782


>gi|449449910|ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Cucumis sativus]
          Length = 757

 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 123/479 (25%), Positives = 223/479 (46%), Gaps = 24/479 (5%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGI---VGELARVGCVIKAQTF 122
           AL FF W A++  Y H  QS+  M+ ++ R      T R     + + +R    ++A+ F
Sbjct: 95  ALQFFNW-AQEMGYTHTEQSYFSMLEILGR-NRHLNTARNFLFSIEKRSRGIVKLEARFF 152

Query: 123 LLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET-- 180
              +R + R  ++   ++ F  M   G +P+    N ++ +L K GR ++  KV  E   
Sbjct: 153 NSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLS 212

Query: 181 ---QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIA 237
                P+  +FNI +   C    V +   +   + R G  P+V  +  L++  C+ G++ 
Sbjct: 213 TYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVT 272

Query: 238 EAYQLLGLMITLGTSLSVN--AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
            AY ++  M      L+ N   +T LI G+   R ++ A  ++E+MV  G   N +TY +
Sbjct: 273 VAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNT 332

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGH-APDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
           LIKG  EA+ F      L+    +G  +PD    N L+ C    G+ DDAL V++ + EL
Sbjct: 333 LIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSEL 392

Query: 355 KLVPDSYTFCSLLSTVCLSGRFS----LLPK------LVCGLEVEADLVVYNALLSYFCK 404
           K+ PDS T+ +L+ ++C  G +     LL K      L+ G   +  +  YN +  Y C+
Sbjct: 393 KIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCE 452

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV 464
            G   +A K +  ++ +G T D  S+  L+ G C     +    +   ++  +   +   
Sbjct: 453 TGKTKKAEKAFRQLMRRG-TQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFLPDFET 511

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM 523
           + ++++ L+   +   A+Q   + +   +  +  ++   +  LLE GRT E+  L   M
Sbjct: 512 YESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRTSESASLIQLM 570



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/341 (22%), Positives = 157/341 (46%), Gaps = 18/341 (5%)

Query: 237 AEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA-GYLW--EKMVQNGCSPNVVTY 293
           ++A Q       +G + +  ++  +++   R R L+ A  +L+  EK  +         +
Sbjct: 93  SKALQFFNWAQEMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGIVKLEARFF 152

Query: 294 TSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE 353
            SL++ F  A +F  +     +++S G +P +V  N L+  L K G  + A  VYD +L 
Sbjct: 153 NSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLS 212

Query: 354 L-KLVPDSYTFCSLLSTVCLSGR-------FSLLPKLVCGLEVEADLVVYNALLSYFCKA 405
              + PD++TF  L+   C++G        F+ L +  C    E D+V YN L+   C+A
Sbjct: 213 TYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGC----EPDVVTYNTLVDGLCRA 268

Query: 406 GFPNQAVKLYNTMLDKG--FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAH 463
           G    A  +   M  K     P+  ++  L+RG C  R+I++A+ V++ +V      N  
Sbjct: 269 GKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNI 328

Query: 464 VHTAIVDRLIEAGRCHKAIQLFRRAIVE-KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQ 522
            +  ++  L EA +  K   +      +  +  D  ++   +      G  ++A  ++ +
Sbjct: 329 TYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFER 388

Query: 523 MKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           M  + + P++ TY  ++ S C+  + +  + LL  +++ +I
Sbjct: 389 MSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKI 429



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 105/535 (19%), Positives = 206/535 (38%), Gaps = 93/535 (17%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGE-LARVGCVIKAQTFLLFLRIYWRGEMYGMVLE 140
            V +F+ +++++ +  GR    + +  E L+  G      TF + +R +    M      
Sbjct: 183 SVVTFNSLLTILLK-RGRTNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFR 241

Query: 141 AFDEMGRFGFTPNTFARNIVMDVLFKIGRV---------------DLGIKVLKETQL--- 182
            F+++ RFG  P+    N ++D L + G+V               DL   V+  T L   
Sbjct: 242 IFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRG 301

Query: 183 -----------------------PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG-FYP 218
                                   N +++N  +  LC+      +KD++      G F P
Sbjct: 302 YCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSP 361

Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
           +   F  L++C C  G + +A ++   M  L        ++ L+    +    + A  L 
Sbjct: 362 DTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLL 421

Query: 279 EKMVQ-------NGCSPNVV----------------------------------TYTSLI 297
           +K+++       +GC P V                                   +Y +LI
Sbjct: 422 DKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPPSYKTLI 481

Query: 298 KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
            G  +   F   +  L ++  +   PD   +  LI+ L  M     AL   + +L     
Sbjct: 482 MGHCKEGTFESGYELLVLMLRKDFLPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHR 541

Query: 358 PDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKL 414
           P+S TF S+L+ +   GR S    L +L+    +  +L      +     AG  ++A +L
Sbjct: 542 PNSSTFHSILAKLLEQGRTSESASLIQLMLDKNIRQNLSFSTGCVRLLFGAGMNDKAFQL 601

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
            + +  KG++        L+R LC  RK+ +   +    + ++  V+  +   ++ +L E
Sbjct: 602 VHLLYGKGYS---VKMEELIRYLCHCRKVIQGSKLLLFSLESHQFVDMDLCNTVIFQLCE 658

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG-RTEEAYILYSQMKHIAV 528
             +  +A  L+ + +VE      +S    ++  LE G + EEA  +  +M+ + +
Sbjct: 659 INKLSEAFSLYYK-LVEMGVHQQLSCQNQLKVSLEAGEKLEEAEFVSKRMEPVEM 712


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 114/478 (23%), Positives = 212/478 (44%), Gaps = 7/478 (1%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFL 186
           + + Y  V    ++M  FG  P+ +  NI+++    + R         K+LK    P+  
Sbjct: 79  KTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTA 138

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           +F   +  LC    + +   +   M+ +GF PNV  +  L+N  CK+G    A +LL  M
Sbjct: 139 TFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSM 198

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
                   V  +T +ID   + R++  A  L+ KMV  G SP++ TYTSLI        +
Sbjct: 199 EQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEW 258

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
               + L+ + +    PD+V  + ++D L K G   +A DV D ++   + P+  T+ +L
Sbjct: 259 KHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNAL 318

Query: 367 LSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           +   CL        K+   +       +++ YN L++ +CK    ++A  L+  M  K  
Sbjct: 319 MDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKEL 378

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
            P+  ++  L+ GLC   ++ +AI ++  +V +    +   +  ++D L +     +A+ 
Sbjct: 379 IPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMA 438

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           L +         D+  YT+ I G+   G  E A  ++S +    + PN  TY +M+   C
Sbjct: 439 LLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLC 498

Query: 544 KERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           +   +    +L  ++       D  T   +T+ + +   +  A+  L EM   G   D
Sbjct: 499 RRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSAD 556



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 189/387 (48%), Gaps = 3/387 (0%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+ + FN  L ++ K      V  +   M   G  P+V    IL+N FC + R   A+ +
Sbjct: 65  PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSV 124

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           L  ++ LG       +T LI G     ++  A +L++KM+  G  PNVVTY +LI G  +
Sbjct: 125 LAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCK 184

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
               + A   L  +E     PD+V +  +ID L K     +A +++  ++   + PD +T
Sbjct: 185 VGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFT 244

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
           + SL+ ++C    +  +  L+  +   ++  D+V+++ ++   CK G   +A  + + M+
Sbjct: 245 YTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMI 304

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
            +G  P+  ++  L+ G C   ++DEA+ V+  +V N  A N   +  +++   +  R  
Sbjct: 305 IRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMD 364

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
           KA  LF     ++   + V+Y   + GL   GR ++A  L+ +M      P+  TYR++L
Sbjct: 365 KATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILL 424

Query: 540 LSFCKERNIKMVKRLLQDVIDARIELD 566
              CK+ ++     LL+ +  + ++ D
Sbjct: 425 DYLCKKSHLDEAMALLKTIEGSNMDPD 451



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 100/448 (22%), Positives = 200/448 (44%), Gaps = 44/448 (9%)

Query: 105 GIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVL 164
            ++ ++ ++G      TF   +R        G  L  FD+M   GF PN      +++ L
Sbjct: 123 SVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGL 182

Query: 165 FKIGRVDLGIKVLKETQL---------------------------------------PNF 185
            K+G  +  I++L+  +                                        P+ 
Sbjct: 183 CKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDI 242

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGL 245
            ++   + +LC L +  +V  ++  M+     P+V +F  +++  CK G+I EA+ ++ +
Sbjct: 243 FTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDM 302

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME-AK 304
           MI  G   +V  +  L+DG      +D A  +++ MV NG +PNV++Y +LI G+ +  +
Sbjct: 303 MIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQR 362

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
           M    + F +M + E   P+ V +N L+  L  +G   DA+ ++  ++    +PD  T+ 
Sbjct: 363 MDKATYLFEEMCQKE-LIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYR 421

Query: 365 SLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
            LL  +C          L K + G  ++ D+ +Y  ++   C+AG    A  +++ +  K
Sbjct: 422 ILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSK 481

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
           G  P+  ++  ++ GLC    +DEA  ++  +  N  + +   +  I   L++     +A
Sbjct: 482 GLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRA 541

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
           IQL +  +   +  DV + T+ +  L +
Sbjct: 542 IQLLQEMLARGFSADVSTTTLLVEMLCD 569



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 79/335 (23%), Positives = 145/335 (43%), Gaps = 5/335 (1%)

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           LD A   + +M+     P+ V +  L+    + K +   FS  + ++S G  PD+   N+
Sbjct: 48  LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 107

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLVCGL 386
           LI+    +     A  V   +L+L L PD+ TF +L+  +C+ G+      L  K++ G 
Sbjct: 108 LINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMI-GE 166

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
             + ++V Y  L++  CK G  N A++L  +M      PD   +  ++  LC  R++ EA
Sbjct: 167 GFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEA 226

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
            N++  +V    + +   +T+++  L           L  + I  K   DVV ++  +  
Sbjct: 227 FNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDA 286

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           L + G+  EA+ +   M    V PN  TY  ++   C +  +    ++   ++      +
Sbjct: 287 LCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPN 346

Query: 567 YHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
             +   L     K      A     EMC   LIP+
Sbjct: 347 VISYNTLINGYCKIQRMDKATYLFEEMCQKELIPN 381



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 112/230 (48%), Gaps = 3/230 (1%)

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYN 396
           + DDAL  ++ +L +   P +  F  LL+++  + ++  +  L   ++   +  D+   N
Sbjct: 47  TLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLN 106

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            L++ FC    P  A  +   +L  G  PD  +F  L+RGLC   KI +A++++  ++  
Sbjct: 107 ILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGE 166

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
               N   +  +++ L + G  + AI+L R         DVV YT  I  L +  +  EA
Sbjct: 167 GFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEA 226

Query: 517 YILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           + L+S+M    + P+ +TY  ++ S C     K V  LL  +I+++I  D
Sbjct: 227 FNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPD 276



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 86/209 (41%), Gaps = 44/209 (21%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           F EM   G  P+     I++D L K   +D  + +LK  +     P+   + I +  +C+
Sbjct: 405 FHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCR 464

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
             ++   +D+   +  KG  PNVR + I++N  C+ G                       
Sbjct: 465 AGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRG----------------------- 501

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
                        LD A  L+ +M  NGCSP+  TY ++ +G ++ K    A   L  + 
Sbjct: 502 ------------LLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEML 549

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALD 346
           + G + D+    +L++ L      DD LD
Sbjct: 550 ARGFSADVSTTTLLVEMLC-----DDKLD 573


>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 585

 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 119/432 (27%), Positives = 202/432 (46%), Gaps = 18/432 (4%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALC 193
            L+ FD M R     +  + N+++  L KI        + K+  L    PNF + NI + 
Sbjct: 80  ALQFFDLMMR-----SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILIN 134

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
            LC +N V      +  ++R+G+ P+V  +  L+   C   RI+EA +L   M  LG   
Sbjct: 135 CLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWP 194

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN------GCSPNVVTYTSLIKGFMEAKMFS 307
           +V  +  LI G  R   +++A  L ++M+         C PN+ +Y  +I    +   + 
Sbjct: 195 NVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWK 254

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A    + +  +G  PD+V  + LID L K G   +A    + ++   +VPD +TF SL+
Sbjct: 255 EAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLI 314

Query: 368 STVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
              CL G      +L   +     E D++ Y  L+  +CK     +A+KLYN ML  G  
Sbjct: 315 EGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKW 374

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           PD  +F  LL+GL  A K+ +A  ++  +  +    N ++ +  +D L + G   +A++L
Sbjct: 375 PDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMEL 434

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
           F         LD+ S+   I GL +  + E A+ L+ ++    + P+  TY +M+  FCK
Sbjct: 435 FNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCK 494

Query: 545 ERNIKMVKRLLQ 556
              +     L Q
Sbjct: 495 NGQVDNANILFQ 506



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 107/425 (25%), Positives = 184/425 (43%), Gaps = 40/425 (9%)

Query: 184 NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
           + +SFN+ L  L K+   S V  +   M   G  PN     IL+NC C + R+ E    +
Sbjct: 90  SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAM 149

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
             ++  G    V  +T LI G     R+  A  L+ +M + GC PNVVTY +LIKG    
Sbjct: 150 AGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRT 209

Query: 304 KMFSIAFSF-LDMLESEGH-----APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
              ++A     +ML           P++  +N++ID L K+G + +A  +++ +++  + 
Sbjct: 210 GNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVR 269

Query: 358 PDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
           PD  TF                                +AL+   CK G   +A K   T
Sbjct: 270 PDVVTF--------------------------------SALIDTLCKEGMVIEAKKFLET 297

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           M+ +G  PD ++F  L+ G C    +D A  ++  +       +   +T ++    +   
Sbjct: 298 MMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFN 357

Query: 478 CHKAIQLFRRAI-VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
             +A++L+   + V K+P D+ ++ V ++GL   G+  +A  L+  +K  AVP N Y   
Sbjct: 358 VEEAMKLYNEMLRVGKWP-DMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICS 416

Query: 537 VMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNL 596
           V L   CK   +     L  ++    ++LD  +   L   + K     +A     ++   
Sbjct: 417 VFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQE 476

Query: 597 GLIPD 601
           GL PD
Sbjct: 477 GLQPD 481



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 107/441 (24%), Positives = 205/441 (46%), Gaps = 32/441 (7%)

Query: 76  QRDYFHDVQSF---------DHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFL 126
           +R Y  DV ++         +H IS  TRL  R +          ++GC     T+   +
Sbjct: 154 RRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQ----------KLGCWPNVVTYGTLI 203

Query: 127 RIYWRGEMYGMVLEAFDEM--GRFGFT----PNTFARNIVMDVLFKIGRVDLGIKVLKET 180
           +   R     + L+   EM  G   +     PN F+ NI++D L KIG+     ++  E 
Sbjct: 204 KGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEM 263

Query: 181 Q----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
                 P+ ++F+  +  LCK   V   K  +  M+ +G  P++  F  L+  FC +G +
Sbjct: 264 VDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDL 323

Query: 237 AEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSL 296
             A +L   M + G    V ++TVLI G+ +   ++ A  L+ +M++ G  P++ T+  L
Sbjct: 324 DSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVL 383

Query: 297 IKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
           +KG   A     A     +++      +L   +V +D L K G   +A+++++ L    +
Sbjct: 384 LKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNM 443

Query: 357 VPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVK 413
             D  +F  L+  +C + +     +L   L  E    D+V Y  +++ FCK G  + A  
Sbjct: 444 KLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANI 503

Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
           L+  M + G TP+  ++  LL G     K++E + +   ++  + ++ A ++T + D + 
Sbjct: 504 LFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYTIVEDMVS 563

Query: 474 EAGRCHKAIQLFRRAIVEKYP 494
           +  +C + + + +R  V+K+P
Sbjct: 564 KDEKCREWLDILQRFPVQKHP 584


>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 724

 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 117/451 (25%), Positives = 211/451 (46%), Gaps = 51/451 (11%)

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCN 194
           L    +M + G  PN+     ++  L K  RV+  +++L+E  L    P+  +FN  +  
Sbjct: 231 LSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILG 290

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           LCK + ++    ++  M+ +GF P+   +  L+N  CK+GR+  A  L    I   TS+ 
Sbjct: 291 LCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLF-YRIPKPTSVI 349

Query: 255 VNAWTVLIDGFRRLRRLDMA-------------------------GYLWEK--------- 280
            N    LI GF    RLD A                         GY W+K         
Sbjct: 350 FNT---LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGY-WKKGLVGLALEV 405

Query: 281 ---MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
              M   GC PNV +YT L+ GF +      A++ L+ + ++G  P+ V  N LI    K
Sbjct: 406 LRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCK 465

Query: 338 MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC----LSGRFSLLPKLVCGLEVEADLV 393
                +A++++  +      PD YTF SL+S +C    +     LL  ++    V A+ V
Sbjct: 466 EHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE-GVVANTV 524

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            YN L++ F + G   +A KL N M+ +G   D  ++  L++GLC A ++D+A ++++ +
Sbjct: 525 TYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKM 584

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
           + +    ++     +++ L  +G   +A++  +  ++     D+V++   I GL   GR 
Sbjct: 585 LRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 644

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
           E+   ++ +++   +PP+  TY  ++   CK
Sbjct: 645 EDGLTMFRKLQAEGIPPDTVTYNTLMSWLCK 675



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 118/469 (25%), Positives = 212/469 (45%), Gaps = 8/469 (1%)

Query: 84  QSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFD 143
           Q+  H +S   R+    +    ++ E+  +GCV  A+TF   +    + +      +  +
Sbjct: 250 QTLIHSLSKCNRVNEALQ----LLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVN 305

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSN 203
            M   GFTP+      +M+ L KIGRVD    +      P  + FN  +        + +
Sbjct: 306 RMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSVIFNTLIHGFVTHGRLDD 365

Query: 204 VKDVIGMMVRK-GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLI 262
            K V+  MV   G  P+V  +  L+  + K G +  A ++L  M   G   +V ++T+L+
Sbjct: 366 AKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILV 425

Query: 263 DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
           DGF +L ++D A  L  +M  +G  PN V +  LI  F +      A      +  +G  
Sbjct: 426 DGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCK 485

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL 382
           PD+   N LI  L ++     AL +   ++   +V ++ T+ +L++     G      KL
Sbjct: 486 PDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKL 545

Query: 383 VCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
           V  +  +    D + YN+L+   C+AG  ++A  L+  ML  G  P + S   L+ GLC 
Sbjct: 546 VNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCR 605

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
           +  ++EA+   + +V+     +     ++++ L  AGR    + +FR+   E  P D V+
Sbjct: 606 SGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVT 665

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
           Y   +  L +GG   +A +L  +       PN  T+ ++L S   +  +
Sbjct: 666 YNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQETL 714



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 141/596 (23%), Positives = 257/596 (43%), Gaps = 64/596 (10%)

Query: 57  LLNCPSDL-IALSFFIWCAKQRDYFHDVQSFDHMISVVTRL--TGRFETVRGIVGELARV 113
           LL  P D+  ++  F W   Q+ Y H   SFD    ++ +L   G F+T+  ++ ++   
Sbjct: 78  LLELPLDVSTSMELFSWTGSQKGYRH---SFDVYQVLIGKLGSNGEFKTIDRLLMQMKDE 134

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGR-FGFTPNTFARNIVMDVLFKIGRVDL 172
           G V K   F+  +R Y +    G       EM   +   P   + N+V+++L       +
Sbjct: 135 GIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKV 194

Query: 173 GIKV----LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLN 228
              V    L     P   +F + +  LC +N+V +   V+  M + G  PN  +++ L++
Sbjct: 195 AANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIH 254

Query: 229 CFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSP 288
              K  R+ EA QLL  M  +G       +  +I G  +  R++ A  +  +M+  G +P
Sbjct: 255 SLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTP 314

Query: 289 NVVTYTSLIKGFME--------------AKMFSIAFSFL------------------DML 316
           + +TY  L+ G  +               K  S+ F+ L                  DM+
Sbjct: 315 DDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMV 374

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
            S G  PD+  +N LI    K G    AL+V   +      P+ Y++  L+   C  G+ 
Sbjct: 375 TSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKI 434

Query: 377 SLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
                L+  +  +    + V +N L+S FCK     +AV+++  M  KG  PD Y+F  L
Sbjct: 435 DEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSL 494

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           + GLC   +I  A+ + + ++      N   +  +++  +  G   +A +L    + +  
Sbjct: 495 ISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGS 554

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
            LD ++Y   I+GL   G  ++A  L+ +M    + P++ +  +++   C+         
Sbjct: 555 LLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCR-------SG 607

Query: 554 LLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD--EMWRKL 607
           ++++ ++ + E+    S   T  I  F+   S +N L   C  G I D   M+RKL
Sbjct: 608 MVEEAVEFQKEMVLRGS---TPDIVTFN---SLINGL---CRAGRIEDGLTMFRKL 654



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 169/355 (47%), Gaps = 8/355 (2%)

Query: 98  GRFETVRGIVGEL-ARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           GR +  + ++ ++    G V    T+   +  YW+  + G+ LE   +M   G  PN ++
Sbjct: 361 GRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYS 420

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
             I++D   K+G++D    +L E       PN + FN  +   CK + +    ++   M 
Sbjct: 421 YTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMP 480

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
           RKG  P+V  F  L++  C++  I  A  LL  MI+ G   +   +  LI+ F R   + 
Sbjct: 481 RKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIK 540

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A  L  +MV  G   + +TY SLIKG   A     A S  + +  +G  P  +  N+LI
Sbjct: 541 EARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILI 600

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA-- 390
           + L + G  ++A++    ++     PD  TF SL++ +C +GR      +   L+ E   
Sbjct: 601 NGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIP 660

Query: 391 -DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
            D V YN L+S+ CK GF   A  L +  ++ GF P++ ++  LL+ L     +D
Sbjct: 661 PDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQETLD 715



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 94/418 (22%), Positives = 162/418 (38%), Gaps = 64/418 (15%)

Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRR--------------------------------- 267
           +LL L + + TS+ + +WT    G+R                                  
Sbjct: 77  KLLELPLDVSTSMELFSWTGSQKGYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEGI 136

Query: 268 ----------LRRLDMAGY-------LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
                     +R  D AG+       + E      C P   +Y  +++  +      +A 
Sbjct: 137 VFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAA 196

Query: 311 S-FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
           + F DML S    P L    V++  L  +   D AL V   + +   VP+S  + +L+ +
Sbjct: 197 NVFYDML-SRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHS 255

Query: 370 VCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
           +    R      LL ++   +    D   +N ++   CK    N+A K+ N ML +GFTP
Sbjct: 256 LSKCNRVNEALQLLEEMFL-MGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTP 314

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           D+ ++  L+ GLC   ++D A +++  I    P   + +   ++   +  GR   A  + 
Sbjct: 315 DDITYGYLMNGLCKIGRVDAAKDLFYRI----PKPTSVIFNTLIHGFVTHGRLDDAKAVL 370

Query: 486 RRAIVEKYPL--DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
              +V  Y +  DV +Y   I G  + G    A  +   M++    PN Y+Y +++  FC
Sbjct: 371 -SDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFC 429

Query: 544 KERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           K   I     LL ++    ++ +      L     K H    AV    EM   G  PD
Sbjct: 430 KLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPD 487


>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 647

 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 127/537 (23%), Positives = 247/537 (45%), Gaps = 25/537 (4%)

Query: 50  PHIVHS---TLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGI 106
           PH  HS    +   PS+  +  +  +      ++  +++F + +         F ++  +
Sbjct: 36  PHTHHSLPPQIFKSPSNTSSHKWGSYKLGDLSFYSLIENFSNSLD--------FTSLEQL 87

Query: 107 VGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMG-RFGFTPNTFARNIVMDVLF 165
           + ++     V   ++F++  + Y +  +    L+ F  MG  F       + N V++V+ 
Sbjct: 88  LHQMKCENRVFIEKSFIIMFKAYGKAHLPQKALDLFHRMGAEFHCKQTVKSFNTVLNVVI 147

Query: 166 KIGRVDLGIK----VLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFY 217
           + G  DL ++    V+         PN LSFN+ +  LC++ +V    +V   M  +   
Sbjct: 148 QEGCFDLALEFYNHVIDSNSFSNIQPNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCV 207

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
            +   +  L++  C  GRI EA  LL  M   GT  +  A+ VLI    +   L  A  L
Sbjct: 208 ADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKL 267

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
            + M   GC PN VTY SL+ G         A S L+ + +    P+ +    L+D   K
Sbjct: 268 VDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVK 327

Query: 338 MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVV 394
            G   D + V   L E     + +++ SL+S +   G+      L K +     + + +V
Sbjct: 328 HGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIV 387

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           Y+AL+   C+ G P++A +    M +KG TP+++++  L+ G   A  I +AI V++ + 
Sbjct: 388 YSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMT 447

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
            N+   +   ++ +++ L + G+  +A+ ++++ +     LDVV+Y+  I G       E
Sbjct: 448 DNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVE 507

Query: 515 EAYILYSQM--KHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
           +   L++QM   +  + P+  TY ++L +FC + ++     +L  ++D   + D+ T
Sbjct: 508 QGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFIT 564



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 82/365 (22%), Positives = 158/365 (43%), Gaps = 23/365 (6%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFD---EMGRFGFTP 152
           L G+ +    ++  +    CV    TF   +  + +   +G  L+       +   G+  
Sbjct: 292 LKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVK---HGRALDGVRVLVSLEEKGYRG 348

Query: 153 NTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVI 208
           N F+ + ++  LFK G+ + G+++ KE       PN + ++  +  LC+       K+ +
Sbjct: 349 NEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYL 408

Query: 209 GMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRL 268
             M  KG  PN   +  L+  + + G I +A  +   M     +     +++LI+G  + 
Sbjct: 409 IEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKN 468

Query: 269 RRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML--ESEGHAPDLV 326
            +L  A  +W++M+  G   +VV Y+S+I GF  A++        + +   +    PD+V
Sbjct: 469 GKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVV 528

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL 386
            +N+L++      S   A+D+ + +L+    PD  T    L T+    R ++ P    G 
Sbjct: 529 TYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTL----RDNMDPPQD-GR 583

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
           E   +LVV   L+      G    A  +   ML K   P   ++   ++ LC   K+ + 
Sbjct: 584 EFLDELVV--RLIKRQRTVG----ASNIIEVMLQKFLLPKPSTWALAVQQLCKPMKVRKT 637

Query: 447 INVYQ 451
           I+  Q
Sbjct: 638 ISECQ 642


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 107/433 (24%), Positives = 209/433 (48%), Gaps = 7/433 (1%)

Query: 120 QTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV--- 176
           QT+   +  Y     +  V+   +EM   G  P+    ++++D L K G+     K+   
Sbjct: 340 QTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYC 399

Query: 177 -LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGR 235
            +++   PN   + I L        ++++ D++ +MV  G  PN  +F I+L  + K   
Sbjct: 400 MIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAM 459

Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
           I EA  +   M   G S  V  + +LID   +L R+D A   + +M+ +G +PN V + S
Sbjct: 460 IDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNS 519

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           L+ G      +  A      +  +G  P++VF N ++  L   G    A  + D +  + 
Sbjct: 520 LVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVG 579

Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKLV---CGLEVEADLVVYNALLSYFCKAGFPNQAV 412
           + P+  ++ +L+   CL+GR     +L+     + ++ DL+ Y+ LL  +CK G  + A 
Sbjct: 580 VRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAY 639

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
            L+  ML KG TP   ++  +L+GL   R+  EA  +Y  ++ +    + + +  I++ L
Sbjct: 640 CLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGL 699

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
            +     +A ++F+    +    +++++T+ I  L +GGR ++A  L++ +    + PN 
Sbjct: 700 CKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNV 759

Query: 533 YTYRVMLLSFCKE 545
            TY +M+ +  +E
Sbjct: 760 VTYCIMMKNIIQE 772



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 122/525 (23%), Positives = 225/525 (42%), Gaps = 51/525 (9%)

Query: 83  VQSFDHMISVVTRL--TGRFETVRGIVGELAR----------------VGCVIKA----- 119
           V++F+H+++VV R   +   E    +   +AR                 GC  +      
Sbjct: 49  VRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPDLCTYSILTGCFCRLGRIEH 108

Query: 120 --QTFLLFLRIYWRGE-------MYGM-----VLEAFD----EMGRFGFTPNTFARNIVM 161
               F L L+  WR         + G+     V EA D     M  FG  PN  + N ++
Sbjct: 109 GFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLL 168

Query: 162 DVLFKIGRVDLGIKVLKETQ-------LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
             L    RV+  +++L            PN +++N  +  LCK   V   + V+  M+ K
Sbjct: 169 KGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDK 228

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           G   +V  +  +++  CK   +  A  +L  MI  G    V  +  +IDG  + + +D A
Sbjct: 229 GVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRA 288

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             + + M+  G  P+VVTY ++I G  +A+    A   L  +  +   PD+  +N LI  
Sbjct: 289 EGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHG 348

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV-CGLE--VEAD 391
               G + + +   + +    L PD  T+  LL  +C +G+ +   K+  C +   ++ +
Sbjct: 349 YLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPN 408

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
           + +Y  LL  +   G       L + M+  G +P+NY F  +L        IDEA++++ 
Sbjct: 409 VTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFS 468

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
            +  +  + +   +  ++D L + GR   A+  F + I +    + V +   + GL    
Sbjct: 469 RMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVD 528

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
           R E+A  L+ +M    V PN   +  ++ + C E  + + +RL+ 
Sbjct: 529 RWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLID 573



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 110/460 (23%), Positives = 201/460 (43%), Gaps = 7/460 (1%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCKLNDVSNV 204
           G  P+    N ++D L K   VD    VL+    +   P+  ++N  +       +   V
Sbjct: 299 GVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEV 358

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
              +  M  +G  P+V  + +LL+  CK G+  EA ++   MI  G   +V  + +L+ G
Sbjct: 359 VRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHG 418

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
           +     +     L + MV NG SPN   +  ++  + +  M   A      +   G +PD
Sbjct: 419 YAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPD 478

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVC 384
           +V + +LID L K+G  DDA+  ++ ++   + P+S  F SL+  +C   R+    +L  
Sbjct: 479 VVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFF 538

Query: 385 GL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
            +    V  ++V +N ++   C  G    A +L ++M   G  P+  S+  L+ G C A 
Sbjct: 539 EMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAG 598

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYT 501
           + DEA  +   +V      +   +  ++    + GR   A  LFR  + +      V+Y+
Sbjct: 599 RTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYS 658

Query: 502 VAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
             ++GL    R  EA  LY  M       + YTY ++L   CK   +    ++ Q +   
Sbjct: 659 TILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSK 718

Query: 562 RIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            +  +  T   +   +FK      A++    + + GL+P+
Sbjct: 719 DLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPN 758



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 136/571 (23%), Positives = 227/571 (39%), Gaps = 86/571 (15%)

Query: 114 GC---VIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV 170
           GC   V+   T L  L    R E    +L    E G    TPN    N ++D L K   V
Sbjct: 156 GCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAV 215

Query: 171 DLGIKVL-----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEI 225
           D    VL     K  +L + ++++  +  LCK   V   + V+  M+ KG  P+V  +  
Sbjct: 216 DRAEGVLQHMIDKGVKL-DVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNT 274

Query: 226 LLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
           +++  CK   +  A  +L  MI  G    V  +  +IDG  + + +D A  + + M+   
Sbjct: 275 IIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKD 334

Query: 286 CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL 345
             P++ TY  LI G++    +      L+ + + G  PD+V +++L+D L K G   +A 
Sbjct: 335 VKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEAR 394

Query: 346 DVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV-------------------CGL 386
            ++  ++   + P+   +  LL      G  + L  L+                   C  
Sbjct: 395 KIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAY 454

Query: 387 EVEA-------------------DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
             +A                   D+V Y  L+   CK G  + AV  +N M++ G TP++
Sbjct: 455 AKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNS 514

Query: 428 YSFVGLLRGLCGARKIDEAINVY-----QGI---------VMNNPAVNAHVHTAIVDRLI 473
             F  L+ GLC   + ++A  ++     QG+         +M N      V  A   RLI
Sbjct: 515 VVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVA--QRLI 572

Query: 474 E-----------------------AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
           +                       AGR  +A QL    +      D++SY   +RG  + 
Sbjct: 573 DSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKT 632

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
           GR + AY L+ +M    V P A TY  +L      R     K L  ++I +  + D +T 
Sbjct: 633 GRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTY 692

Query: 571 IRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
             +   + K +    A      +C+  L P+
Sbjct: 693 NIILNGLCKTNCVDEAFKIFQSLCSKDLRPN 723



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/370 (25%), Positives = 163/370 (44%), Gaps = 48/370 (12%)

Query: 122 FLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ 181
           F + L  Y +  M    +  F  M + G +P+     I++D L K+GRVD    VLK  Q
Sbjct: 447 FNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDA--VLKFNQ 504

Query: 182 L-----------------------------------------PNFLSFNIALCNLCKLND 200
           +                                         PN + FN  +CNLC    
Sbjct: 505 MINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQ 564

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
           V   + +I  M R G  PNV  +  L+   C  GR  EA QLL +M+++G    + ++  
Sbjct: 565 VMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDT 624

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS-FLDMLESE 319
           L+ G+ +  R+D A  L+ +M++ G +P  VTY+++++G    + FS A   +L+M++S 
Sbjct: 625 LLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKS- 683

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
           G   D+  +N++++ L K    D+A  ++  L    L P+  TF  ++  +   GR    
Sbjct: 684 GQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDA 743

Query: 380 PKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
             L   +       ++V Y  ++    + G  ++   L+  M   G TPD+     ++R 
Sbjct: 744 MDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRS 803

Query: 437 LCGARKIDEA 446
           L G  +I  A
Sbjct: 804 LLGRGEIMRA 813



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/428 (23%), Positives = 192/428 (44%), Gaps = 7/428 (1%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ- 241
           P+  +++I     C+L  + +     G++++ G+  N  +   LLN  C   R+ EA   
Sbjct: 88  PDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDI 147

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG---CSPNVVTYTSLIK 298
           LL  M   G   +V +   L+ G    +R++ A  L   M ++G   C+PNVVTY ++I 
Sbjct: 148 LLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIID 207

Query: 299 GFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP 358
           G  +A+    A   L  +  +G   D+V ++ +ID L K  + D A  V   +++  + P
Sbjct: 208 GLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKP 267

Query: 359 DSYTFCSLLSTVCLS---GRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLY 415
           D  T+ +++  +C +    R   + + +    V+ D+V YN ++   CKA   ++A  + 
Sbjct: 268 DVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVL 327

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
             M+DK   PD  ++  L+ G     +  E +   + +       +   ++ ++D L + 
Sbjct: 328 QHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKN 387

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
           G+C +A ++F   I +    +V  Y + + G    G   +   L   M    + PN Y +
Sbjct: 388 GKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIF 447

Query: 536 RVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCN 595
            ++L ++ K+  I     +   +    +  D  T   L   + K      AV +  +M N
Sbjct: 448 NIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMIN 507

Query: 596 LGLIPDEM 603
            G+ P+ +
Sbjct: 508 DGVTPNSV 515



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 86/379 (22%), Positives = 160/379 (42%), Gaps = 13/379 (3%)

Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLR---RLDMAGYLWEKMVQ---NGCSPN 289
           I +A +L   ++      SV A+  L++   R R     ++A  L+ +M +   N   P+
Sbjct: 30  IDDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPD 89

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVY- 348
           + TY+ L   F         F+   ++   G   + V  N L++ L      D+A+D+  
Sbjct: 90  LCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILL 149

Query: 349 DGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV------CGLEVEADLVVYNALLSYF 402
             + E   +P+  +  +LL  +C   R     +L+       G     ++V YN ++   
Sbjct: 150 RRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGL 209

Query: 403 CKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNA 462
           CKA   ++A  +   M+DKG   D  ++  ++ GLC A+ +D A  V Q ++      + 
Sbjct: 210 CKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDV 269

Query: 463 HVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQ 522
             +  I+D L +A    +A  + +  I +    DVV+Y   I GL +    + A  +   
Sbjct: 270 VTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQH 329

Query: 523 MKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHS 582
           M    V P+  TY  ++  +      K V R L+++    ++ D  T   L  ++ K   
Sbjct: 330 MIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGK 389

Query: 583 SSSAVNQLVEMCNLGLIPD 601
            + A      M   G+ P+
Sbjct: 390 CTEARKIFYCMIRKGIKPN 408



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 60/272 (22%), Positives = 113/272 (41%), Gaps = 14/272 (5%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           L GR +    ++  +  VG      ++   LR Y +          F EM R G TP   
Sbjct: 596 LAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAV 655

Query: 156 ARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
             + ++  LF   R     +L + ++K  Q  +  ++NI L  LCK N V     +   +
Sbjct: 656 TYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSL 715

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
             K   PN+  F I+++   K GR  +A  L   + + G   +V  + +++    +   L
Sbjct: 716 CSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLL 775

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           D    L+  M ++GC+P+ V   ++I+  +       A ++L  ++    + +    ++L
Sbjct: 776 DEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLL 835

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
           I   S+    + A          K +P+ Y F
Sbjct: 836 ISLFSREEYKNHA----------KSLPEKYLF 857


>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 605

 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 129/545 (23%), Positives = 235/545 (43%), Gaps = 45/545 (8%)

Query: 104 RGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDV 163
           + I  ++ ++G  +   TF + +            +    +M  F   P+  + N ++DV
Sbjct: 33  KAIFSDVIKLGVEVNTNTFNILICGCCIENKLSEAIGLIGKMKHFSCFPDNVSYNTILDV 92

Query: 164 LFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN 219
           L K G++    DL + +      PN  +FNI +   CKL  +    +VI +M R    P+
Sbjct: 93  LCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPD 152

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
           VR +  L+   CK G+I EA++L   M  L     V  + +LI+G            L +
Sbjct: 153 VRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELID 212

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
           +M   G  PN VTY  ++K +++      A + L  +E  G +PD V  N L +   K G
Sbjct: 213 EMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAG 272

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVC----LSGRFSLLPK-------------- 381
              +A  + D +    L  +S T  ++L T+C    L   + LL                
Sbjct: 273 RLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYG 332

Query: 382 -LVCGL---------------EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
            L+ G                E+   ++ Y  ++   C++G  +Q++   N +L+ G  P
Sbjct: 333 TLIMGYFKVGKSXXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVP 392

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           D  ++  ++ G C   ++D+A +    +V  +   +      +V  L   G   KA++LF
Sbjct: 393 DQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLF 452

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
           +  I +   +D V++   I GL E GR EEA+ L ++M+   + P+ YT+  +L +    
Sbjct: 453 KTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADA 512

Query: 546 RNIKMVKRLLQDVI------DARIELDYHTSIRLTKFIFKFHSSSSAVN-QLVEMCNLGL 598
             +K  +  +  ++      D  I L+   +   ++   +   +S A + Q+ E+C  G 
Sbjct: 513 GRMKEAEEFMSGIVEQGKLQDQTISLNKRKTESSSETSQESDPNSVAFSEQINELCTQGK 572

Query: 599 IPDEM 603
             D M
Sbjct: 573 YKDAM 577


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 116/432 (26%), Positives = 197/432 (45%), Gaps = 15/432 (3%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFD---EMGRFGFTP 152
           +   F+  R +  ++ R GC     T+ + +    +    GM+ EA D   +M   G  P
Sbjct: 57  MANSFDDARELFADMNRRGCPPSPVTYNVMIDASCK---RGMLEEACDLIKKMIEDGHVP 113

Query: 153 NTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVI 208
           +    N VMD L K  RV+  + +  E +     PN  S N  +  LC+ + +     V 
Sbjct: 114 DVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVF 173

Query: 209 GMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRL 268
             M  K   P+   + IL++   K G++ EAY+L   M+  G + S   + V+I G    
Sbjct: 174 HEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLA 233

Query: 269 RRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH 328
             LD A  L++ M   GC P+  T+  LI    +      AF  L  +  +GH PD+V +
Sbjct: 234 YTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTY 293

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF----SLLPKLVC 384
           + LI  L  +   DDA  + + +++ +  P   T  +L+  +C +GR      +L  +V 
Sbjct: 294 STLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVS 353

Query: 385 GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
             +   D+V YN L+   C+AG   +A +L + M+ +G  P+  ++  L+ GLC A ++ 
Sbjct: 354 SGQ-SPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLP 412

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
           EA  V+  +  +  A N   +TA++     AG+    ++LF   +      D V Y    
Sbjct: 413 EACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLA 472

Query: 505 RGLLEGGRTEEA 516
             L + GR+  A
Sbjct: 473 AELCKSGRSARA 484



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 99/407 (24%), Positives = 193/407 (47%), Gaps = 7/407 (1%)

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCKLND 200
           M     +P++++  I++D L K G+++    L  K+L     P+ +++   +  LC  N 
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
             + +++   M R+G  P+   + ++++  CK G + EA  L+  MI  G    V  +  
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           ++DG  +  R++ A  L+ +M + GC+PN  ++ ++I G  +      A      +E++ 
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
             PD   + +LID L+K G  ++A  ++  +L+  + P + T+  ++  +CL+       
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 381 KLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
           +L   +  +        +N L+   CK G  ++A +L   M D G  PD  ++  L+ GL
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
           C   ++D+A ++ + +V             ++  L +AGR  +A ++    +      DV
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
           V+Y   + G    G+TE A  L S M    + PN  TY  ++   CK
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCK 407



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 118/463 (25%), Positives = 219/463 (47%), Gaps = 20/463 (4%)

Query: 79  YFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMV 138
           +  DV +++ ++  + + + R E    +  E+ R+GC    ++    +    +       
Sbjct: 111 HVPDVVTYNTVMDGLCK-SSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQA 169

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCN 194
            + F EM      P++++  I++D L K G+++   K+    L     P+ +++N+ +  
Sbjct: 170 CQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHG 229

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           +C    +    ++   M  KG  P+   F IL++  CK G++ EA++LL  M   G    
Sbjct: 230 MCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPD 289

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           V  ++ LI G   + R+D A +L E MV+  C P VVT  +LI G  +A     A   LD
Sbjct: 290 VVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLD 349

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            + S G +PD+V +N L+    + G  + A ++   ++   L P+  T+ +L+S +C + 
Sbjct: 350 AMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKAN 409

Query: 375 RFSLLPKLVCGLEVE-------ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           R   LP+  CG+  +        +L  Y AL+  FC AG  +  +KL+  M+  G +PD+
Sbjct: 410 R---LPE-ACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDH 465

Query: 428 YSFVGLLRGLCGARKIDEAINVYQG--IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
             +  L   LC + +   A+ + +     + + A    V+   VD L+EAG+   A+  F
Sbjct: 466 VVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALG-F 524

Query: 486 RRAIVEKYPLDVVSYTVA-IRGLLEGGRTEEAYILYSQMKHIA 527
            R +V    L       + + GL + G+  EA  +  ++  +A
Sbjct: 525 VRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMDLA 567



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 97/394 (24%), Positives = 177/394 (44%), Gaps = 3/394 (0%)

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M  +   P+   + IL++   K G++ +A  L   ++  G + S  A+T LI G      
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
            D A  L+  M + GC P+ VTY  +I    +  M   A   +  +  +GH PD+V +N 
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE--- 387
           ++D L K    ++AL +++ +  L   P+  +  +++  +C   +     ++   +E   
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
           +  D   Y  L+    KAG  N+A KL+  MLD G TP   ++  ++ G+C A  +DEA+
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            +++ +       +      ++D   + G+  +A +L +R   + +  DVV+Y+  I GL
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
               R ++A  L   M      P   T   ++   CK   IK  + +L  ++ +    D 
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360

Query: 568 HTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            T   L     +   +  A   L +M   GL P+
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPN 394


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 128/513 (24%), Positives = 232/513 (45%), Gaps = 14/513 (2%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRF---GFTPNTF 155
            FE   G++ E+  +G V         +    R    G V++AFD + R    G  P+ F
Sbjct: 311 EFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRK---GKVVDAFDLVNRVKKVGAMPSLF 367

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
             N +++ L K G+ D    + KE        N ++++I + + C+   +      +G M
Sbjct: 368 VYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKM 427

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
           +  G    V  +  L+N  CK+G ++ A      MI  G   +V ++T LI G+    +L
Sbjct: 428 IMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKL 487

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
             A  L+ +M   G +PN  T+T+LI     A   + AF   D +  +   P+ V +NV+
Sbjct: 488 HEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVM 547

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA- 390
           I+   K G+   A ++ + +++  LVPD+YT+  L+S++C +GR     K +  L  E  
Sbjct: 548 IEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHF 607

Query: 391 --DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
             + + Y+ALL  +CK G    A+ +   M+ +G   D   +  L+ G    +       
Sbjct: 608 KLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFG 667

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           + + +       +  ++T+++D   +AG   KA  ++   I E    ++V+YT  I  L 
Sbjct: 668 LLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELC 727

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
           + G  ++A +L+ +M      PN  TY   L    +E +++   +L  D++   +     
Sbjct: 728 KAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLKGLLANTVS 787

Query: 569 TSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            +I +  F  K      A   L EM +  + PD
Sbjct: 788 YNILVRGFC-KLGRVEEATKLLDEMIDNAIFPD 819



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/459 (25%), Positives = 217/459 (47%), Gaps = 13/459 (2%)

Query: 117 IKAQTFLLFLRIYWRGE-MYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI- 174
           I +  F L ++ Y + + M+  VL  F  M +    P       V++ L KI RVD+ + 
Sbjct: 156 ISSLGFDLLIQSYVQEKRMFDSVL-IFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLV 214

Query: 175 ---KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFC 231
              ++L     P+   +   + + C+L + +  K++I  M       NV ++ +L++  C
Sbjct: 215 LFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDL--NVVVYNVLIHGLC 272

Query: 232 KMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVV 291
           K  R+ EA ++   +I  G + S   +  L+ G  +++  ++   + ++M++ G  P   
Sbjct: 273 KNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEA 332

Query: 292 TYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGL 351
             +SL++G         AF  ++ ++  G  P L  +N LI+ L K G +D+A  ++  +
Sbjct: 333 ALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEM 392

Query: 352 LELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLVCGLEVEADLVVYNALLSYFCKAGF 407
            E  L  +  T+  L+ + C  G+       L K++    ++  +  YN+L++  CK G 
Sbjct: 393 GEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMA-GIKITVYPYNSLINGHCKLGN 451

Query: 408 PNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTA 467
            + AV  ++ M+DKG  P   S+  L+ G C   K+ EA  +Y  +     A N +  T 
Sbjct: 452 LSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTT 511

Query: 468 IVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIA 527
           ++  L  A R   A +LF   + +    + V+Y V I G  + G T +A+ L +QM    
Sbjct: 512 LISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKG 571

Query: 528 VPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           + P+ YTYR ++ S C    +   K+ + D+     +L+
Sbjct: 572 LVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLN 610



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 113/449 (25%), Positives = 197/449 (43%), Gaps = 43/449 (9%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF----LSFNIALCNLCK 197
           F EMG  G   N    +I++D   + G++D  I  L +  +         +N  +   CK
Sbjct: 389 FKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCK 448

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
           L ++S        M+ KG  P V  +  L++ +C  G++ EA++L   M   G + +   
Sbjct: 449 LGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYT 508

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T LI    R  R+  A  L+++M++    PN VTY  +I+G  +      AF  L+ + 
Sbjct: 509 FTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMV 568

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF- 376
            +G  PD   +  LI  L   G   +A    D L       +   + +LL   C  GR  
Sbjct: 569 QKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLR 628

Query: 377 ------------SLLPKLVC------------------GL-------EVEADLVVYNALL 399
                        +   LVC                  GL        +  D V+Y +++
Sbjct: 629 DALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMI 688

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
             + KAG   +A  +++ M+D+G TP+  ++  L+  LC A  +D+A  +++ ++++N  
Sbjct: 689 DGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNST 748

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            N   +   +D L   G   KA+QL    +++    + VSY + +RG  + GR EEA  L
Sbjct: 749 PNHVTYCCFLDHLAREGSMEKAVQL-HNDMLKGLLANTVSYNILVRGFCKLGRVEEATKL 807

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
             +M   A+ P+  TY  ++   C+  N+
Sbjct: 808 LDEMIDNAIFPDCITYSTIIYQCCRRGNL 836



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/413 (24%), Positives = 194/413 (46%), Gaps = 11/413 (2%)

Query: 136 GMVLEAF---DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV----LKETQLPNFLSF 188
           G + EAF    EM   G  PNT+    ++  LF+  R+    ++    L++  +PN +++
Sbjct: 485 GKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTY 544

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           N+ +   CK  +     +++  MV+KG  P+   +  L++  C  GR+ EA + +  +  
Sbjct: 545 NVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHR 604

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
               L+   ++ L+ G+ +  RL  A  +  +MV+ G   ++V Y  LI G ++ +  S 
Sbjct: 605 EHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSA 664

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
            F  L  +  +   PD V +  +ID  SK GS   A  ++D +++    P+  T+ +L++
Sbjct: 665 VFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLIN 724

Query: 369 TVCLSG---RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
            +C +G   +  LL K +       + V Y   L +  + G   +AV+L+N ML KG   
Sbjct: 725 ELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDML-KGLLA 783

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           +  S+  L+RG C   +++EA  +   ++ N    +   ++ I+ +    G    AI+ +
Sbjct: 784 NTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFW 843

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
              + +    D ++Y   I G    G   +A+ L   M    V PN  T++ +
Sbjct: 844 DTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSL 896



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/391 (22%), Positives = 182/391 (46%), Gaps = 5/391 (1%)

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
           +P   +    L  L K+  V  V  + G ++  G  P++ ++  ++  FC++   A+A +
Sbjct: 190 MPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKE 249

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           ++  M +  + L+V  + VLI G  + +R+  A  +   ++Q G + + VTY +L+ G  
Sbjct: 250 MIQRMES--SDLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLC 307

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           + + F +    +D +   G  P     + L++ L + G   DA D+ + + ++  +P  +
Sbjct: 308 KVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLF 367

Query: 362 TFCSLLSTVCLSGRF---SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
            + +L++++C  G+F    LL K +    + A+ V Y+ L+  FC+ G  + A+     M
Sbjct: 368 VYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKM 427

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
           +  G     Y +  L+ G C    +  A++ +  ++          +T+++      G+ 
Sbjct: 428 IMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKL 487

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
           H+A +L+     +    +  ++T  I  L    R  +A+ L+ +M    + PN  TY VM
Sbjct: 488 HEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVM 547

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
           +   CKE N      LL  ++   +  D +T
Sbjct: 548 IEGHCKEGNTVKAFELLNQMVQKGLVPDTYT 578



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/417 (23%), Positives = 188/417 (45%), Gaps = 40/417 (9%)

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           F++L+  + +  R+ ++  +  LM        V     +++G  ++RR+DM   L+ +++
Sbjct: 161 FDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEIL 220

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
             G  P++  Y ++I+ F E K F+ A   +  +ES     ++V +NVLI  L K     
Sbjct: 221 SMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSD--LNVVVYNVLIHGLCKNKRVW 278

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL-------------------LPKLV 383
           +A+++ +GL++  L     T+C+L+  +C    F +                   L  LV
Sbjct: 279 EAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLV 338

Query: 384 CGLEVEADLV-------------------VYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
            GL  +  +V                   VYNAL++  CK G  ++A  L+  M +KG  
Sbjct: 339 EGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLC 398

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
            ++ ++  L+   C   K+D AI+    ++M    +  + + ++++   + G    A+  
Sbjct: 399 ANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSF 458

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
           F   I +     VVSYT  I G    G+  EA+ LY +M    + PN YT+  ++ +  +
Sbjct: 459 FDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFR 518

Query: 545 ERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
              +    RL  ++++  +  +  T   + +   K  ++  A   L +M   GL+PD
Sbjct: 519 ANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPD 575



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 98/475 (20%), Positives = 199/475 (41%), Gaps = 9/475 (1%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           R + V  + GE+  +G       ++  +R +   + +    E    M       N    N
Sbjct: 208 RVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDL--NVVVYN 265

Query: 159 IVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNL----CKLNDVSNVKDVIGMMVRK 214
           +++  L K  RV   +++          +  +  C L    CK+ +      V+  M+  
Sbjct: 266 VLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIEL 325

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           GF P       L+    + G++ +A+ L+  +  +G   S+  +  LI+   +  + D A
Sbjct: 326 GFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEA 385

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             L+++M + G   N VTY+ LI  F        A  FL  +   G    +  +N LI+ 
Sbjct: 386 ELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLING 445

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEAD 391
             K+G+   A+  +D +++  L P   ++ SL+S  C  G+     +L   + G  +  +
Sbjct: 446 HCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPN 505

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
              +  L+S   +A     A +L++ ML++   P+  ++  ++ G C      +A  +  
Sbjct: 506 TYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLN 565

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
            +V      + + +  ++  L   GR  +A +       E + L+ + Y+  + G  + G
Sbjct: 566 QMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEG 625

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           R  +A  +  +M    V  +   Y V++    KE++   V  LL+++ D R+  D
Sbjct: 626 RLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPD 680



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/211 (23%), Positives = 88/211 (41%), Gaps = 24/211 (11%)

Query: 102 TVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVM 161
           T   ++ EL + G + KA+       + W+            EM     TPN       +
Sbjct: 718 TYTTLINELCKAGLMDKAE-------LLWK------------EMLVSNSTPNHVTYCCFL 758

Query: 162 DVLFKIGRVDLGIKV---LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYP 218
           D L + G ++  +++   + +  L N +S+NI +   CKL  V     ++  M+    +P
Sbjct: 759 DHLAREGSMEKAVQLHNDMLKGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFP 818

Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
           +   +  ++   C+ G +  A +    M+  G      A+  LI G      L  A  L 
Sbjct: 819 DCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELR 878

Query: 279 EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           + M++ G  PN  T+ SL  G   ++ FSI+
Sbjct: 879 DDMIRRGVKPNQATHKSLSHG--ASRKFSIS 907


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 113/434 (26%), Positives = 212/434 (48%), Gaps = 39/434 (8%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFL 186
           +G+++   L+  D++   GF  N  +   +++ L K+G+    +++L+        PN +
Sbjct: 155 KGQIH-QALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVV 213

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
            +N  + ++CK+  V+   D+   MV KG  P+V  +  L++ FC +G++ +A  L   M
Sbjct: 214 MYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKM 273

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
           I    + +V  + +L+DGF + RRL  A  +   M++ G  P+V TY SL+  +   K  
Sbjct: 274 IFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEV 333

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
           + A    + +   G  P++  ++++I    K+   D+A++++  +    ++PD       
Sbjct: 334 NKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPD------- 386

Query: 367 LSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
                                    +V YN+L+   CK G  + A+KL + M D+G   D
Sbjct: 387 -------------------------VVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHD 421

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
             ++  +L  LC   ++D+AI +   +       +   +T +VD L + GR   A  +F 
Sbjct: 422 KITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFE 481

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS-FCKE 545
             +V+ Y LDV  YT  I+G    G  +E+  L S+M+     PNA TY +++ S F K+
Sbjct: 482 DLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKD 541

Query: 546 RNIKMVKRLLQDVI 559
            N K  ++LL+++I
Sbjct: 542 ENDK-AEKLLREMI 554



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 87/356 (24%), Positives = 180/356 (50%), Gaps = 3/356 (0%)

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
           V+  +++ G+ PNV     L+   C  G+I +A Q    ++ LG  L+  ++  LI+G  
Sbjct: 129 VLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLC 188

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
           ++ +   A  L  ++      PNVV Y ++I    + K+ + AF     + S+G +PD+V
Sbjct: 189 KVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVV 248

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL 386
            +N LI     +G   DA D+++ ++   + P+ YTF  L+   C   R      ++  +
Sbjct: 249 TYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMM 308

Query: 387 ---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
               ++ D+  YN+L+  +C     N+A  ++NT+  +G  P+ +S+  ++ G C  +K+
Sbjct: 309 MKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKV 368

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           DEA+N+++ +  NN   +   + +++D L + G+   A++L         P D ++Y   
Sbjct: 369 DEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSI 428

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           +  L +  + ++A  L ++MK   + P+  TY  ++   CK   ++  + + +D++
Sbjct: 429 LDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLL 484



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/419 (24%), Positives = 184/419 (43%), Gaps = 32/419 (7%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+   F   L +L K N  S V  +   M   G   ++ +  IL+NCF ++G+   ++ +
Sbjct: 70  PSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSV 129

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           L  ++ +G   +V   T LI G     ++  A    +K+V  G   N V+Y +LI G  +
Sbjct: 130 LAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCK 189

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
               S A   L  ++ +   P++V +N +ID + K+   ++A D+Y  ++   + PD   
Sbjct: 190 VGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPD--- 246

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
                                        +V YNAL+S FC  G    A  L+N M+ + 
Sbjct: 247 -----------------------------VVTYNALISGFCIVGKMKDATDLFNKMIFEN 277

Query: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI 482
             P+ Y+F  L+ G C  R++ EA NV   ++      +   + +++DR       +KA 
Sbjct: 278 INPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAK 337

Query: 483 QLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
            +F          ++ SY++ I G  +  + +EA  L+ +M    + P+  TY  ++   
Sbjct: 338 HIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGL 397

Query: 543 CKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           CK   I    +L+ ++ D  +  D  T   +   + K H    A+  L +M + G+ PD
Sbjct: 398 CKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPD 456



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 78/330 (23%), Positives = 153/330 (46%), Gaps = 3/330 (0%)

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           L  +M  NG + ++V  + LI  F +     ++FS L  +   G+ P+++    LI  L 
Sbjct: 94  LHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLC 153

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLV 393
             G    AL  +D ++ L    +  ++ +L++ +C  G+ S   +L   V G  V+ ++V
Sbjct: 154 LKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVV 213

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
           +YN ++   CK    N+A  LY+ M+ KG +PD  ++  L+ G C   K+ +A +++  +
Sbjct: 214 MYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKM 273

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
           +  N   N +    +VD   +  R  +A  +    + +    DV +Y   +         
Sbjct: 274 IFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEV 333

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
            +A  +++ +    V PN ++Y +M+  FCK + +     L +++    I  D  T   L
Sbjct: 334 NKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSL 393

Query: 574 TKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
              + K    S A+  + EM + G+  D++
Sbjct: 394 IDGLCKLGKISYALKLVDEMHDRGVPHDKI 423


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 140/574 (24%), Positives = 242/574 (42%), Gaps = 90/574 (15%)

Query: 44  FPIILAPHIVHSTLLNCPSD-LIALSFFIWCAKQRDYFHDVQSFDHMISVVTR---LTGR 99
           F   LAP  V   LL    D  +AL FF W   Q  + H  +S+  ++ +V R    T  
Sbjct: 123 FDSALAPIWVSKILLGLREDPKLALKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDA 182

Query: 100 FETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNI 159
            +TV+ ++                    +  R +M   V   FD +           RNI
Sbjct: 183 HDTVKEVI--------------------MNSRMDMGFPVCNIFDMLWS--------TRNI 214

Query: 160 ------VMDVLFKIGRVDLGIKVLKETQ-----------LPNFLSFNIALCNLCKLNDVS 202
                 V DVLF +  V+LG+  L+E             LP   S N  L  L K  +  
Sbjct: 215 CVSGSGVFDVLFSV-FVELGL--LEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQ 271

Query: 203 NVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLI 262
            V+     M+  G  P+V  + ++++  CK G +  + +L   M  +G S  V  +  LI
Sbjct: 272 LVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLI 331

Query: 263 DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
           DG+ ++  L+    L+ +M   GC P+++TY  LI  + + +    AF +   +++ G  
Sbjct: 332 DGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLK 391

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL 382
           P++V ++ LID   K G    A+ ++  +    L+P+ +T+ SL+   C +G  +   KL
Sbjct: 392 PNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKL 451

Query: 383 VCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL-- 437
           +  +    V+ ++V Y ALL   CKAG   +A +++ +ML  G +P+   +  L+ G   
Sbjct: 452 LNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIK 511

Query: 438 ---------------------------------CGARKIDEAINVYQGIVMNNPAVNAHV 464
                                            C  RK++E   + + +     + N  +
Sbjct: 512 AERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVI 571

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
            T I+D   +AG+   A+  F+          +V+Y V I GL + G  E A   + +M 
Sbjct: 572 STTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRML 631

Query: 525 HIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
            + + PN   Y  ++   CK   I+  K+L  ++
Sbjct: 632 SLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEM 665



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 110/462 (23%), Positives = 212/462 (45%), Gaps = 8/462 (1%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV +++ +I    ++ G  E V  +  E+  VGCV    T+   +  Y + E      E 
Sbjct: 323 DVVTYNSLIDGYGKV-GSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEY 381

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           F EM   G  PN    + ++D   K G +   IK+  + +    LPN  ++   +   CK
Sbjct: 382 FSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCK 441

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
             +++    ++  M++ G   N+  +  LL+  CK GR+ EA ++   M+  G S +   
Sbjct: 442 AGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQV 501

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T L+ G+ +  R++ A  + ++M +    P+++ Y S+I G    +        L+ ++
Sbjct: 502 YTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMK 561

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
           S G + + V    +ID   K G   DAL+ +  + ++ +     T+C L+  +C +G   
Sbjct: 562 SRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVE 621

Query: 378 LLPKLVC---GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
           L     C    L ++ ++ VY +L+   CK      A KL++ M  +G TPD  +F  L+
Sbjct: 622 LAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALI 681

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            G      + EA+ +   +       + HV+T++V    + G  H+A + F   I +   
Sbjct: 682 DGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGIL 741

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
            + V     +R   + G+ +EA  L ++M+ + +   + T +
Sbjct: 742 PEEVLCICLLREYYKRGQLDEAIELKNEMERMGLITESATMQ 783



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/277 (19%), Positives = 120/277 (43%), Gaps = 3/277 (1%)

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCG 385
           +VL     ++G  ++A + +  +   + +P + +   LL  +  SG   L+ K    + G
Sbjct: 223 DVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIG 282

Query: 386 LEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
             +   +  YN ++ Y CK G    + +L+  M + G +PD  ++  L+ G      ++E
Sbjct: 283 AGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEE 342

Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
             +++  +       +   +  +++   +  +  +A + F          +VV+Y+  I 
Sbjct: 343 VASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLID 402

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
              + G  + A  L+  M+   + PN +TY  ++ + CK  N+    +LL D++ A ++L
Sbjct: 403 AFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKL 462

Query: 566 DYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
           +  T   L   + K      A      M   G+ P++
Sbjct: 463 NIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQ 499


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 126/542 (23%), Positives = 233/542 (42%), Gaps = 36/542 (6%)

Query: 50  PHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGE 109
           P      LLN  SD   L  F+  A+ +   H+     H   +   +  RF+  R     
Sbjct: 39  PQAASYVLLNSQSDQRTLLNFLTWAQAQAQAHNFFFTPHCKCLALHILVRFKLYRTAHSL 98

Query: 110 LARVGCVIK-----------AQTFLLFLRIYWRGEMYGMVLEAFDEMG------------ 146
            A +   +              TF L    +    ++ +V+++   +G            
Sbjct: 99  AADLAATLPDPTGASLFRHLHDTFHLCSSPFSSSAVFDLVVKSLSRLGFVPKALTLLHLA 158

Query: 147 -RFGFTPNTFARNIVMDVLFKIGRV-----DLGIKVLKETQL----PNFLSFNIALCNLC 196
            R GF P   + N V+D L +         D   +V ++       PN  ++N+ +  + 
Sbjct: 159 NRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVV 218

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
              D+      +  M ++G  PNV  +  L++  CK  ++ EA  LL  M   G + ++ 
Sbjct: 219 SQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLI 278

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
           ++  +I+G     R+   G L E+M   G  P+ VTY +L+ GF +          L  +
Sbjct: 279 SYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEM 338

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
             +G +P++V +  LI+C+ K G+   A++++D +    L P+  T+ +L+   C  G  
Sbjct: 339 VGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLM 398

Query: 377 SLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
           +   K++  + V      +V YNAL+  +C  G   +AV +   M+++G  PD  S+  +
Sbjct: 399 NEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTV 458

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           + G C  R++ +A  + + +V      +   +++++  L    +  +A  LFR  +    
Sbjct: 459 IAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGL 518

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
           P D V+YT  I      G   +A  L+ +M      P+  TY V++    K+   K+ KR
Sbjct: 519 PPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKR 578

Query: 554 LL 555
           LL
Sbjct: 579 LL 580



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 121/527 (22%), Positives = 241/527 (45%), Gaps = 24/527 (4%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G  E   G + ++ + G      T+   +    + +     +     M   G   N  + 
Sbjct: 221 GDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISY 280

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N V++ L   GR+    ++++E +    +P+ +++N  +   CK  ++     ++  MV 
Sbjct: 281 NSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVG 340

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           KG  PNV  +  L+NC CK G ++ A ++   M   G   +   +T LIDGF +   ++ 
Sbjct: 341 KGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNE 400

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  +  +M+ +G SP+VVTY +L+ G+        A   L  +   G  PD+V ++ +I 
Sbjct: 401 AYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIA 460

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVE 389
              +      A  + + ++E  ++PD+ T+ SL+  +CL  +    F L  +++    + 
Sbjct: 461 GFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMM-RRGLP 519

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            D V Y +L++ +C  G  ++A++L++ M+ +GF PDN ++  L+ GL    +   A  +
Sbjct: 520 PDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRL 579

Query: 450 -----YQGIVMNNPAVNAHVHT----------AIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
                Y+  V ++   N  +             +V      G  ++A ++F+  +   + 
Sbjct: 580 LLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHK 639

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
            +   Y + I G   GG   +AY LY +++H +   +      ++ +  +E     + RL
Sbjct: 640 PNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRL 699

Query: 555 LQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           LQ+++ +    D   +  L +  FK  +  + +N L EM   GL+PD
Sbjct: 700 LQNILRSCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDGLLPD 746



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 98/390 (25%), Positives = 190/390 (48%), Gaps = 8/390 (2%)

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRL-----RRLDMAGY 276
           +F++++    ++G + +A  LL L    G + +V ++  ++D   R      R  D A  
Sbjct: 134 VFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAER 193

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           ++  MV+NG SPNV TY  +I+G +          F+  +E EG +P++V +N LID   
Sbjct: 194 VFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASC 253

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVC---GLEVEADLV 393
           K     +A+ +   +    +  +  ++ S+++ +C  GR S + +LV    G  +  D V
Sbjct: 254 KKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEV 313

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            YN L++ FCK G  +Q + L + M+ KG +P+  ++  L+  +C A  +  A+ ++  +
Sbjct: 314 TYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQM 373

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
            +     N   +T ++D   + G  ++A ++    IV  +   VV+Y   + G    GR 
Sbjct: 374 RVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRV 433

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
           +EA  +   M    +PP+  +Y  ++  FC+ER +    ++ +++++  +  D  T   L
Sbjct: 434 QEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSL 493

Query: 574 TKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
            + +        A +   EM   GL PDE+
Sbjct: 494 IQGLCLQQKLVEAFDLFREMMRRGLPPDEV 523


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 121/505 (23%), Positives = 223/505 (44%), Gaps = 49/505 (9%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE---TQLPNFLSFNIALCNLCKL 198
           F+ M   G TP+  + NI+++   KI RVD  + + KE   ++ P  + FN  L +  K+
Sbjct: 261 FNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQFNKILDSFAKM 320

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
              S    +   +  KG  P++    IL+NCFC MG+I   + +L  ++  G   S    
Sbjct: 321 KHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTL 380

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
             LI G     ++  A +  +K++  G   N V+Y +LI G  +      A   L  ++ 
Sbjct: 381 NTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDG 440

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS- 377
               P++  ++ +ID L K     +A  ++  +    +  D  T+ +L+   C+ G+   
Sbjct: 441 RLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKE 500

Query: 378 ---LLPKLV-----------------CGLE-----------------VEADLVVYNALLS 400
              LL ++V                  G E                 V+ D+  YN L++
Sbjct: 501 AIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMN 560

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
            +       +A  ++N M   G TPD +++  L+ G C ++ +DEA+N+++ +   N   
Sbjct: 561 GYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVP 620

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
           +   ++++VD L ++GR      L         P DV++Y   I GL + G  ++A  L+
Sbjct: 621 DTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALF 680

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKF 580
           ++MK   + PN +T+ ++L   CK   +K  + + QD++       YH  + +   +   
Sbjct: 681 NKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTK----GYHLDVYIYNVMIYG 736

Query: 581 HSSS----SAVNQLVEMCNLGLIPD 601
           H        A+  L +M   G IP+
Sbjct: 737 HCKQGLLEEALTMLSKMEENGCIPN 761



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 137/598 (22%), Positives = 258/598 (43%), Gaps = 49/598 (8%)

Query: 61  PSDLIALSFFI--WC----AKQRDYFHD---VQSFD-HMISVVTRLTG---------RFE 101
           P D + L+  I   C     K+  +FHD    Q F  + +S  T + G           +
Sbjct: 60  PPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIK 119

Query: 102 TVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVM 161
            +R I G LA+    +         +     E YG+    F EM   G + N    + ++
Sbjct: 120 FLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGL----FSEMTVKGISANVVTYSTLI 175

Query: 162 DVLFKIGRVD-----LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
                +G++      L + VLK    PN  ++NI +  LCK   V   K V+ +M++   
Sbjct: 176 YGFCIVGKLKEALGLLNVMVLKTIN-PNVCTYNILVDALCKEGKVKEAKSVLAVMLKACV 234

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
             NV  +  L++ +  +  + +A  +   M  +G +  V+++ ++I+GF +++R+D A  
Sbjct: 235 KSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALN 294

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           L+++M+ +   P ++ +  ++  F + K +S A S    LE +G  PDL   N+LI+C  
Sbjct: 295 LFKEMILSRFPP-IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFC 353

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVC-GLEVEAD 391
            MG       V   +L+    P + T  +L+  +CL G+         KL+  G ++   
Sbjct: 354 HMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQ- 412

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
            V Y  L++  CK G    A+KL   +  +   P+   +  ++  LC  + + EA  ++ 
Sbjct: 413 -VSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFS 471

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
            + +   + +   ++ ++      G+  +AI L    +++    DV +YT+ +  L + G
Sbjct: 472 EMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEG 531

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSI 571
           + +EA  + + M    V P+ +TY  ++  +     +K  + +   +    +  D HT  
Sbjct: 532 KVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYT 591

Query: 572 RLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTPVSLFDGFVPCER 629
            L     K      A+N   EM    ++PD            T+T  SL DG     R
Sbjct: 592 ILINGFCKSKMVDEALNLFKEMHQKNMVPD------------TVTYSSLVDGLCKSGR 637



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 108/418 (25%), Positives = 195/418 (46%), Gaps = 7/418 (1%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNV 204
           G+ P+T   N ++  L   G+V   +    K+L +    N +S+   +  +CK+ D    
Sbjct: 372 GYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGA 431

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
             ++  +  +   PNV M+  +++  CK   ++EAY L   M   G S  V  ++ LI G
Sbjct: 432 IKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYG 491

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
           F  + +L  A  L  +MV    +P+V TYT L+    +      A S L ++      PD
Sbjct: 492 FCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPD 551

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVC 384
           +  +N L++    +     A  V++ +  + + PD +T+  L++  C S        L  
Sbjct: 552 VFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFK 611

Query: 385 GLEVE---ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
            +  +    D V Y++L+   CK+G  +    L + M D+G   D  ++  L+ GLC   
Sbjct: 612 EMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNG 671

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYT 501
            +D+AI ++  +       N    T ++D L + GR   A ++F+  + + Y LDV  Y 
Sbjct: 672 HLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYN 731

Query: 502 VAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           V I G  + G  EEA  + S+M+     PNA T+ +++ +  K+      ++LL+ +I
Sbjct: 732 VMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMI 789



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 95/388 (24%), Positives = 185/388 (47%), Gaps = 16/388 (4%)

Query: 75  KQRDYFHD---VQSFD-HMISVVTRLTG--RFETVRGIVGELARVGCVIKAQTFLLFLRI 128
           K+  +FHD    Q F  + +S  T + G  +    RG +  L ++   +      ++  I
Sbjct: 394 KKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTI 453

Query: 129 YWRGEMYGMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL--- 182
                 Y +V EA   F EM   G + +    + ++     +G++   I +L E  L   
Sbjct: 454 IDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTI 513

Query: 183 -PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
            P+  ++ I +  L K   V   K V+ +M++    P+V  +  L+N +  +  + +A  
Sbjct: 514 NPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQH 573

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           +   M  +G +  V+ +T+LI+GF + + +D A  L+++M Q    P+ VTY+SL+ G  
Sbjct: 574 VFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLC 633

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           ++   S  +  +D +   G   D++ +N LID L K G  D A+ +++ + +  + P+++
Sbjct: 634 KSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTF 693

Query: 362 TFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           TF  LL  +C  GR     ++   L  +    D+ +YN ++   CK G   +A+ + + M
Sbjct: 694 TFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKM 753

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEA 446
            + G  P+  +F  ++  L    + D+A
Sbjct: 754 EENGCIPNAVTFDIIINALFKKDENDKA 781



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 98/457 (21%), Positives = 182/457 (39%), Gaps = 40/457 (8%)

Query: 175 KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
           K+LK    P+ ++ N  +  LC    V         ++ +GF  N   +  L+N  C++G
Sbjct: 53  KILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIG 112

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
               A + L  +       +V  +  +ID   + + +  A  L+ +M   G S NVVTY+
Sbjct: 113 DTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYS 172

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
           +LI GF        A   L+++  +   P++  +N+L+D L K G   +A  V   +L+ 
Sbjct: 173 TLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKA 232

Query: 355 KLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQA 411
            +  +  T+ +L+    L         +   +    V  D+  YN +++ FCK    ++A
Sbjct: 233 CVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKA 292

Query: 412 VKL--------------YNTMLD--------------------KGFTPDNYSFVGLLRGL 437
           + L              +N +LD                    KG  PD ++   L+   
Sbjct: 293 LNLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCF 352

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
           C   +I    +V   I+      +      ++  L   G+  KA+    + + + + L+ 
Sbjct: 353 CHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQ 412

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
           VSY   I G+ + G T  A  L  ++      PN   Y  ++ + CK + +     L  +
Sbjct: 413 VSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSE 472

Query: 558 VIDARIELD---YHTSIRLTKFIFKFHSSSSAVNQLV 591
           +    I  D   Y T I     + K   +   +N++V
Sbjct: 473 MTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMV 509



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 107/262 (40%), Gaps = 34/262 (12%)

Query: 342 DDA--LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALL 399
           DDA  L V   +L+    PD+ T  +L+  +CL G+                        
Sbjct: 43  DDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVK---------------------- 80

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
                     +A+  ++ +L +GF  +  S+  L+ G+C       AI   + I      
Sbjct: 81  ----------EALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKFLRKIDGRLAK 130

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            N  ++  I+D L +     +A  LF    V+    +VV+Y+  I G    G+ +EA  L
Sbjct: 131 PNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGL 190

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK 579
            + M    + PN  TY +++ + CKE  +K  K +L  ++ A ++ +  T   L    F 
Sbjct: 191 LNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFL 250

Query: 580 FHSSSSAVNQLVEMCNLGLIPD 601
            +    A +    M  +G+ PD
Sbjct: 251 VYEVKKAQHVFNAMSLMGVTPD 272


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 116/501 (23%), Positives = 220/501 (43%), Gaps = 36/501 (7%)

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           ++ E+   GC        + L    RG  +   + A   +   G T ++   N+V+  + 
Sbjct: 130 VLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAIC 189

Query: 166 KIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
           + G VD G+++L++       P+ +S+N  L  LC      +V++++  MVR G  PNV 
Sbjct: 190 EQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVA 249

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            F  L+   C+ G   + ++ L  M   G +  +  +  +IDG  +    ++A  +  +M
Sbjct: 250 TFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRM 309

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
              G  PNVV Y +++KG   A+ +  A   L  +  E    D V  N+L+D   + G  
Sbjct: 310 PSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLV 369

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSY 401
           D  +++ + +LE   +PD                                ++ Y  +++ 
Sbjct: 370 DRVIELLEQMLEHGCIPD--------------------------------VITYTTVING 397

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVN 461
           FCK G  ++AV L   M   G  P+  S+  +L+GLC A +  +A  +   ++      N
Sbjct: 398 FCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPN 457

Query: 462 AHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYS 521
                 +++ + + G   +AI+L ++ +V     D++SY+  I GL + G+TEEA  L +
Sbjct: 458 PVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLN 517

Query: 522 QMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFH 581
            M +  + PN   Y  M  +  +E     + ++   + DA +  D      +   + K  
Sbjct: 518 VMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRW 577

Query: 582 SSSSAVNQLVEMCNLGLIPDE 602
            +  A++    M + G +P+E
Sbjct: 578 ETDRAIDFFAYMVSNGCMPNE 598



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 94/372 (25%), Positives = 178/372 (47%), Gaps = 8/372 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           +V +F+ +I+ + R  G FE V   + ++   GC    + +   +    +   + +  + 
Sbjct: 247 NVATFNTLIAYLCR-NGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDI 305

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGR----VDLGIKVLKETQLPNFLSFNIALCNLCK 197
              M  +G  PN    N V+  L    R     DL  ++ +E    + ++FNI +   C+
Sbjct: 306 LSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQ 365

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              V  V +++  M+  G  P+V  +  ++N FCK G + EA  LL  M   G   +  +
Sbjct: 366 NGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTIS 425

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T+++ G  R  R   A  L   M+Q GC PN VT+ +LI    +  +   A   L  + 
Sbjct: 426 YTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQML 485

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G +PDL+ ++ +ID L K G  ++AL++ + ++   + P++  + S+ S +   GR  
Sbjct: 486 VNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTD 545

Query: 378 LLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
            + ++   ++   V +D  +YNA++S  CK    ++A+  +  M+  G  P+  ++  L+
Sbjct: 546 KIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILI 605

Query: 435 RGLCGARKIDEA 446
           RGL     + EA
Sbjct: 606 RGLASEGLVREA 617



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/272 (19%), Positives = 102/272 (37%), Gaps = 38/272 (13%)

Query: 365 SLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
           +L+ ++C +GR +   + +      A +V YNA+++ +C+AG   Q              
Sbjct: 49  ALIRSLCAAGRTADAARALDTAGDAAGVVAYNAMIAGYCRAG---QVAAARRLAAAVPVP 105

Query: 425 PDNYSFVGLLRGLCGARKIDEAINV-----YQGIVMNNPAVNAHVHTA------------ 467
           P+ Y++  ++R LC    I +A+ V      +G     P  +  +  A            
Sbjct: 106 PNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRA 165

Query: 468 ------------------IVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
                             +V  + E G   + ++L R+        D+VSY   ++GL  
Sbjct: 166 LQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCM 225

Query: 510 GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
             R ++   L  +M  +  PPN  T+  ++   C+    + V   L  + +     D   
Sbjct: 226 AKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRM 285

Query: 570 SIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
              +   I K      A + L  M + GL P+
Sbjct: 286 YATIIDGICKDGHHEVANDILSRMPSYGLKPN 317


>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
 gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
          Length = 474

 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 180/367 (49%), Gaps = 7/367 (1%)

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           G   ++    IL+NCFC + R+     +L  ++ LG   S+  +T L++G     ++D  
Sbjct: 92  GIEQDIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQV 151

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             L++ M+  G  PNV TY  +I    ++   + A  FL  +E  G  P++V ++ LID 
Sbjct: 152 MMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDG 211

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS-----LLPKLVCGLEVE 389
               G  D+A  V+D ++     P+ YT+ SL++  C   R       L   L  GL   
Sbjct: 212 YCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGL--V 269

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            D+V +  ++S  C+AG P  A +L+  +   G TP+  ++  LL GLC    ++EA  +
Sbjct: 270 PDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFAL 329

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
           +Q +  +    N  ++T ++D L + G+     +LF R I E    +V +YT  +  L +
Sbjct: 330 FQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCK 389

Query: 510 GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
            G   EA+ L+ +M+     P+   Y V++  F + ++  M ++L++++++     D  T
Sbjct: 390 EGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAAT 449

Query: 570 SIRLTKF 576
              L  F
Sbjct: 450 RALLNDF 456



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 104/394 (26%), Positives = 182/394 (46%), Gaps = 35/394 (8%)

Query: 210 MMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLR 269
           M++RK   P +  F  L +   +MG       L   +  LG    +++ ++LI+ F  L 
Sbjct: 53  MLLRKPL-PCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLH 111

Query: 270 RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF-MEAKMFSIAFSFLDMLESEGHAPDLVFH 328
           R+D    +  K+++ G  P++VT+T+L+ G  ME KM  +   + DML   G  P++  +
Sbjct: 112 RVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDML-VRGLQPNVYTY 170

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV 388
           NV+I+ LSK G  ++AL     + ++  VP+   + +L+   CL G+             
Sbjct: 171 NVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQM------------ 218

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
                               ++A  +++ M+ KG TP+ Y++  L+ G C   +I+EA+ 
Sbjct: 219 --------------------DEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQ 258

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           +    +      +    T I+  L  AGR   A QLFR      +  ++++Y V + GL 
Sbjct: 259 LLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLC 318

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
           + G  EEA+ L+ +M+   V PN   Y +++ S CK   IK  K L   +ID  ++ + +
Sbjct: 319 KHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVY 378

Query: 569 TSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
           T   L   + K      A     +M   G  PD+
Sbjct: 379 TYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDK 412



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 178/367 (48%), Gaps = 13/367 (3%)

Query: 71  IWCAKQRDYF---HDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLR 127
           ++ +K+ ++     D+ S   +I+    L  R +    ++ ++ ++G      TF   L 
Sbjct: 82  VYLSKEIEFLGIEQDIHSLSILINCFCHLH-RVDFGLSVLSKILKLGLEPSIVTFTTLLN 140

Query: 128 -IYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----L 182
            +   G+M   V+  +D+M   G  PN +  N++++ L K G+ +  +  LK+ +    +
Sbjct: 141 GLCMEGKM-DQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCV 199

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           PN ++++  +   C    +   + V  +MV KG  PNV  +  L+N +CK+ RI EA QL
Sbjct: 200 PNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQL 259

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           L   +  G    +  +T +I G  R  R   A  L+  +  +G +PN++TY  L+ G  +
Sbjct: 260 LDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCK 319

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
                 AF+    ++     P+LV + +LID L K G   D  +++  L++  L P+ YT
Sbjct: 320 HGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYT 379

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTML 419
           + +L+  +C  G      KL   +E +    D   YN ++  F +   P+ A +L   M+
Sbjct: 380 YTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMV 439

Query: 420 DKGFTPD 426
           ++GF+ D
Sbjct: 440 NRGFSAD 446



 Score = 42.4 bits (98), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 77/213 (36%), Gaps = 59/213 (27%)

Query: 102 TVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM-----YGMVLEA-------------FD 143
           T   I+  L R G  + AQ   LF  I   G       YG++L+              F 
Sbjct: 274 TFTTIISGLCRAGRPLAAQQ--LFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQ 331

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLN 199
           EM R    PN     I++D L K G++    +L  +++ E   PN  ++   +       
Sbjct: 332 EMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALV------- 384

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
                                          CK G I EA++L   M   G +    A+ 
Sbjct: 385 ----------------------------GALCKEGLIIEAHKLFRKMEEDGCTPDKCAYN 416

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVT 292
           V+I GF + +   MA  L E+MV  G S +  T
Sbjct: 417 VIIQGFLQHKDPSMARQLVEEMVNRGFSADAAT 449


>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 104/420 (24%), Positives = 200/420 (47%), Gaps = 10/420 (2%)

Query: 133 EMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ---LPNFLSFN 189
           E YG++    +     G  P+  A N ++  L K  RV+  +++ +E +   +PN  ++N
Sbjct: 353 EAYGLL----ERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYN 408

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
           I +  LC+   ++   ++   M R G +PNV    I+++  CK  ++ EA  +   M   
Sbjct: 409 ILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDK 468

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
             + +   ++ LIDG  +  R+D A  L+EKM+  G  P  + YTSLI+ F +       
Sbjct: 469 VCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDG 528

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
                 +   G +PDL   N  +DC+ K G  +    ++  +     +PD+ ++  L+  
Sbjct: 529 HKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHG 588

Query: 370 VCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
           +  +G  +   +L   ++ +    D   YNA++  FCK+G  N+A +L   M  KG  P 
Sbjct: 589 LVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPT 648

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
             ++  ++ GL    ++DEA  +++    N   +N  V+++++D   + GR  +A  +  
Sbjct: 649 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIME 708

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
             + +    +V ++   +  L++     EA I +  MK +  PPN  TY +++   C+ R
Sbjct: 709 ELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVR 768



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 139/601 (23%), Positives = 254/601 (42%), Gaps = 61/601 (10%)

Query: 61  PSDLIALSFFIWCAKQR---DYFHDVQS-----FDHMISVVTRLTGRFETVRG------I 106
           PS  I++     C K R   + F  +Q+     F    S  T L G    VR       +
Sbjct: 158 PSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLIL 217

Query: 107 VGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK 166
             ++  +G  +    F   +R++ R       L   DEM       +    N+ +D   K
Sbjct: 218 FHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGK 277

Query: 167 IGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
            G+VD+  K   E +    +P+ +++   +  LCK N +    ++   + +    P    
Sbjct: 278 AGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYA 337

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           +  ++  +   G+  EAY LL      G+  SV A+  ++    + RR++ A  ++E+M 
Sbjct: 338 YNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMK 397

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
           ++   PNV TY  LI         + A    D +E  G  P+++  N++ID L K    +
Sbjct: 398 RDAV-PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLE 456

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLV-CGLEVEADLVVYNA 397
           +A  +++G+ +    P++ TF SL+  +   GR    +SL  K++ CG    A  +VY +
Sbjct: 457 EACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGA--IVYTS 514

Query: 398 LLSYFCKAGFPNQAVKLY---------------NTMLD--------------------KG 422
           L+  F K G      K+Y               NT +D                     G
Sbjct: 515 LIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHG 574

Query: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI 482
           F PD  S+  L+ GL  A   +E   ++  +      ++ H + A++D   ++G+ +KA 
Sbjct: 575 FIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAY 634

Query: 483 QLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
           QL     V+ +P  VV+Y   I GL +  R +EAY+L+ + K   +  N   Y  ++  F
Sbjct: 635 QLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGF 694

Query: 543 CKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
            K   I     ++++++   +  + +T   L   + K    + A+     M +L   P++
Sbjct: 695 GKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQ 754

Query: 603 M 603
           +
Sbjct: 755 I 755



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 105/400 (26%), Positives = 192/400 (48%), Gaps = 13/400 (3%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR +    +  ++   G V  A  +   +R +++        + + EM   G +P+    
Sbjct: 488 GRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLI 547

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N  MD +FK G  + G  + +E      +P+  S++I +  L K    +   ++   M  
Sbjct: 548 NTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKE 607

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +G   +   +  +++ FCK G++ +AYQLL  M   G   +V  +  +IDG  ++ RLD 
Sbjct: 608 QGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDE 667

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L+E+   NG   NVV Y+SLI GF +      A+  ++ L  +G  P++   N L+D
Sbjct: 668 AYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLD 727

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEA 390
            L K    ++AL  +  + +LK  P+  T+  L++ +C   +F+   +  + +  L ++ 
Sbjct: 728 ALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKP 787

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           + + Y  ++S   KAG   +A  L++     G  PD+ S+  ++ GL  A K  +A  ++
Sbjct: 788 NTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALF 847

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
           +   +     N H  T +V  L++A   HKA  L + AIV
Sbjct: 848 EETRLK--GCNIHTKTCVV--LLDA--LHKAECLEQAAIV 881



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 106/485 (21%), Positives = 209/485 (43%), Gaps = 43/485 (8%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
            G+F+   G++      G +     +   L    +       L  F+EM R    PN   
Sbjct: 348 AGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDA-VPNVPT 406

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            NI++D+L + G+++  +++  + +     PN L+ NI +  LCK   +     +   M 
Sbjct: 407 YNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMD 466

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
            K   PN   F  L++   K GR+ +AY L   M+  G       +T LI  F +  R +
Sbjct: 467 DKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKE 526

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
               ++++MV  GCSP++    + +    +A       +    + + G  PD   +++LI
Sbjct: 527 DGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILI 586

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA-- 390
             L K G  ++  +++  + E   V D++ + +++   C SG+ +   +L+  ++V+   
Sbjct: 587 HGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHP 646

Query: 391 ------------------------------------DLVVYNALLSYFCKAGFPNQAVKL 414
                                               ++VVY++L+  F K G  ++A  +
Sbjct: 647 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLI 706

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
              ++ KG TP+ Y++  LL  L  A +I+EA+  +Q +       N   ++ +++ L  
Sbjct: 707 MEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCR 766

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
             + +KA   ++         + ++YT  I GL + G   EA  L+S+ K     P++ +
Sbjct: 767 VRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSAS 826

Query: 535 YRVML 539
           Y  M+
Sbjct: 827 YNAMI 831



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 111/474 (23%), Positives = 204/474 (43%), Gaps = 21/474 (4%)

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM-FEILLNCFCKMGRIAEAYQLLGL 245
           ++N  L  + +  +  +++ ++  M   GF P+  +  E++ NC  K  ++ EA+ ++  
Sbjct: 127 AYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCV-KSRKLREAFDIIQT 185

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           M       + +A+T+LI     +R  D    L+ +M + G   NV  +T+LI+ F     
Sbjct: 186 MRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGR 245

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
              A S LD ++S     D+V +NV IDC  K G  D +   +  +    L+PD  T+ S
Sbjct: 246 VDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTS 305

Query: 366 LLSTVCLSGRFSLLPKLVCGLEVEADL---VVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
           ++  +C + R     +L   LE    +     YN ++  +  AG  ++A  L      KG
Sbjct: 306 MIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKG 365

Query: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV-NAHVHTAIVDRLIEAGRCHKA 481
             P   ++  +L  L   R+++EA+ +++   M   AV N   +  ++D L   G+ + A
Sbjct: 366 SIPSVIAYNCILTCLGKKRRVEEALRIFE--EMKRDAVPNVPTYNILIDMLCREGKLNAA 423

Query: 482 IQLFRRAIVEKYPL--DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
           +++  R  +E+  L  +V++  + I  L +  + EEA  ++  M      PNA T+  ++
Sbjct: 424 LEI--RDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLI 481

Query: 540 LSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLI 599
               K   +     L + ++D            L +  FK            EM + G  
Sbjct: 482 DGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCS 541

Query: 600 PD----EMWRKLGLLSDETMTPVSLF-----DGFVPCERRAGNANHLLLNGGVG 644
           PD      +      + ET    +LF      GF+P  R      H L+  G+ 
Sbjct: 542 PDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLA 595


>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 108/459 (23%), Positives = 211/459 (45%), Gaps = 34/459 (7%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNL 195
           + ++E+   G   N +   I++D L +  R+   +  L+ET      P+ +SFN  +   
Sbjct: 221 DVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGF 280

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
           CK+  V   K    MM++ G  P+V  + ILL+  C  G + EA +    M   G    +
Sbjct: 281 CKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDI 340

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
             + +L +GFR L  +  A  + ++M+ NG +P++VTYT LI G  +      +F   + 
Sbjct: 341 VTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEK 400

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYD---------------------------DALDVY 348
           + S+G    +V + VL+  L K G  D                           +A+++Y
Sbjct: 401 MLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVEEAIELY 460

Query: 349 DGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKA 405
           + +   ++ P+S+   +++S +   G  S   +    V   +V  ++++YN ++  + K 
Sbjct: 461 EEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKL 520

Query: 406 GFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVH 465
           G   +AV+ Y  +++KG +P   +F  L+ G C   K+ EA+ +   I ++     +  +
Sbjct: 521 GNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTY 580

Query: 466 TAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKH 525
           T +++   E G  H    +      +      ++YTV ++GL + GR  E+  L   M  
Sbjct: 581 TTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYA 640

Query: 526 IAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
             + P+  TY  ++ SFCK  +++   +L   ++   ++
Sbjct: 641 RGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQ 679



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/408 (24%), Positives = 187/408 (45%), Gaps = 14/408 (3%)

Query: 202 SNVKDVIGMMVRKG---FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
           S ++D +  +   G   F P+V  F  L++ FCKMG +  A     +MI  G    V ++
Sbjct: 249 SRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSY 308

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
            +L+ G      ++ A      M  +G  P++VTY  L  GF    + S A+  +  +  
Sbjct: 309 NILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLL 368

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL 378
            G  PDLV + +LI    +MG+ +++  + + +L   L     T+  LLS++C SGR   
Sbjct: 369 NGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDE 428

Query: 379 LPKLVCGLEV---EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
              L+  +EV   + DL+ Y+         G   +A++LY  M  K   P+++    ++ 
Sbjct: 429 AVILLHEMEVIGLKPDLLTYSR--------GAVEEAIELYEEMCSKRIYPNSFVCSAIIS 480

Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
           GL     I EA   +  +  ++ A    ++  ++D   + G   +A++ +++ I +    
Sbjct: 481 GLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISP 540

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
            +V++   I G  + G+  EA  L   +K   + P + TY  ++  +C+E ++  +  +L
Sbjct: 541 TIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDML 600

Query: 556 QDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
            ++    I+    T   + K + K      +V  L  M   GL PD++
Sbjct: 601 HEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQI 648



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/473 (20%), Positives = 200/473 (42%), Gaps = 70/473 (14%)

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLND 200
           M ++G  P+ ++ NI++  L   G ++  ++   + +     P+ +++NI       L  
Sbjct: 296 MIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGL 355

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
           +S    V+  M+  G  P++  + IL+   C+MG I E+++L   M++ G  LS+  +TV
Sbjct: 356 ISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTV 415

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT-------------------------- 294
           L+    +  R+D A  L  +M   G  P+++TY+                          
Sbjct: 416 LLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVEEAIELYEEMCSKRIYPNSFVC 475

Query: 295 -SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE 353
            ++I G  E    S A  + D +     A +++ +N++ID  +K+G+  +A+  Y  ++E
Sbjct: 476 SAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIE 535

Query: 354 LKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV-------------------EADL-- 392
             + P   TF SL+   C  G+ +   KL+  ++V                   E D+  
Sbjct: 536 KGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHS 595

Query: 393 -----------------VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
                            + Y  ++   CK G  +++V+L   M  +G  PD  ++  +++
Sbjct: 596 MFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQ 655

Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
             C A  + +A  ++  ++ ++   +   +  +++ L   G    A +L      +   L
Sbjct: 656 SFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRL 715

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
             V+YT  I+     G  + A + + QM       +   Y  ++   CK RN+
Sbjct: 716 TKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCK-RNL 767



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/328 (22%), Positives = 140/328 (42%), Gaps = 8/328 (2%)

Query: 126 LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQ 181
           L  Y RG +   + E ++EM      PN+F  + ++  LF+ G +         V K   
Sbjct: 445 LLTYSRGAVEEAI-ELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDV 503

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
               + +NI +    KL ++         ++ KG  P +  F  L+  FCK G++AEA +
Sbjct: 504 AEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVK 563

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           LL  +   G   +   +T L++G+     +     +  +M      P  +TYT ++KG  
Sbjct: 564 LLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLC 623

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           +      +   L  + + G  PD + +N +I    K      A  +++ +L+  L P   
Sbjct: 624 KEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPV 683

Query: 362 TFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           T+  L++ +C+ G      +L+  L+   +    V Y  ++   C  G    A+  ++ M
Sbjct: 684 TYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQM 743

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEA 446
           +++GF      +  ++  LC    I +A
Sbjct: 744 VERGFEVSIRDYSAVINRLCKRNLITDA 771



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/318 (24%), Positives = 143/318 (44%), Gaps = 14/318 (4%)

Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
           N  ++++L   + +   + +A  +L  M  L   +S+  +  L+     LR  D+   ++
Sbjct: 167 NNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLL---YNLRHTDIMWDVY 223

Query: 279 EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
            ++  +G   N  T   LI G         A +FL     E   P +V  N L+    KM
Sbjct: 224 NEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKM 283

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVY 395
           GS D A   +  +++  L+PD Y++  LL  +C++G      +    +E   VE D+V Y
Sbjct: 284 GSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTY 343

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
           N L + F   G  + A K+   ML  G  PD  ++  L+ G C    I+E+  + + ++ 
Sbjct: 344 NILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLS 403

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
               ++   +T ++  L ++GR  +A+ L     V     D+++Y+         G  EE
Sbjct: 404 QGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYS--------RGAVEE 455

Query: 516 AYILYSQMKHIAVPPNAY 533
           A  LY +M    + PN++
Sbjct: 456 AIELYEEMCSKRIYPNSF 473



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/304 (21%), Positives = 127/304 (41%), Gaps = 14/304 (4%)

Query: 136 GMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIK----VLKETQLPNFLSF 188
           G + EA   FD + +          NI++D   K+G +   ++    ++++   P  ++F
Sbjct: 486 GAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTF 545

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           N  +   CK   ++    ++  +   G  P    +  L+N +C+ G +   + +L  M  
Sbjct: 546 NSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEA 605

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
                +   +TV++ G  +  RL  +  L + M   G  P+ +TY ++I+ F +A     
Sbjct: 606 KAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQK 665

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           AF   + +      P  V +NVLI+ L   G+  DA  +   L +  +      + +++ 
Sbjct: 666 AFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIK 725

Query: 369 TVCLSGRFS----LLPKLVC-GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
             C  G          ++V  G EV   +  Y+A+++  CK      A   +  ML  G 
Sbjct: 726 AHCAKGDVQNALVFFHQMVERGFEV--SIRDYSAVINRLCKRNLITDAKFFFCMMLTHGI 783

Query: 424 TPDN 427
            PD 
Sbjct: 784 PPDQ 787



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/250 (20%), Positives = 111/250 (44%), Gaps = 6/250 (2%)

Query: 114 GCVIKAQTFLLFLRIY-WRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDL 172
           G V  + T+   +  Y   G+M+ M  +   EM      P      +V+  L K GR+  
Sbjct: 572 GLVPTSVTYTTLMNGYCEEGDMHSM-FDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHE 630

Query: 173 GIKVLK----ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLN 228
            +++LK        P+ +++N  + + CK +D+     +   M++    P+   + +L+N
Sbjct: 631 SVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLIN 690

Query: 229 CFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSP 288
             C  G + +A +LL  +      L+  A+T +I        +  A   + +MV+ G   
Sbjct: 691 GLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEV 750

Query: 289 NVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVY 348
           ++  Y+++I    +  + + A  F  M+ + G  PD     V+++   + G  +   +++
Sbjct: 751 SIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIF 810

Query: 349 DGLLELKLVP 358
             +++  L+P
Sbjct: 811 AMMIKCGLLP 820



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 103/263 (39%), Gaps = 38/263 (14%)

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNAL 398
           D   DVY+ +    +  + YT   L+  +C   R        +   G E    +V +NAL
Sbjct: 217 DIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNAL 276

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           +S FCK G  + A   +  M+  G  PD YS+  LL GLC A  ++EA+       M N 
Sbjct: 277 MSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTND--MENH 334

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
            V                                   D+V+Y +   G    G    A+ 
Sbjct: 335 GVEP---------------------------------DIVTYNILANGFRILGLISGAWK 361

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
           +  +M    + P+  TY +++   C+  NI+   +L + ++   ++L   T   L   + 
Sbjct: 362 VVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLC 421

Query: 579 KFHSSSSAVNQLVEMCNLGLIPD 601
           K      AV  L EM  +GL PD
Sbjct: 422 KSGRIDEAVILLHEMEVIGLKPD 444



 Score = 47.0 bits (110), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 43/196 (21%), Positives = 80/196 (40%), Gaps = 5/196 (2%)

Query: 373 SGRFSLLPKLVCGLEVEADL--VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           SG    L +L+C    + DL  VV++ L   + +A   + A+ +   M          ++
Sbjct: 147 SGSAPSLCELLCNSFRDWDLNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATY 206

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             LL  L   R  D   +VY  I  +    N + +  ++D L    R   A+   R    
Sbjct: 207 NSLLYNL---RHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGG 263

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
           E++   VVS+   + G  + G  + A   +  M    + P+ Y+Y ++L   C   +++ 
Sbjct: 264 EEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEE 323

Query: 551 VKRLLQDVIDARIELD 566
                 D+ +  +E D
Sbjct: 324 ALEFTNDMENHGVEPD 339


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 127/540 (23%), Positives = 236/540 (43%), Gaps = 56/540 (10%)

Query: 74  AKQRDYF---HDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYW 130
           +++ D F   H+V + + +I+    L  R      ++ ++ ++GC     +F   ++   
Sbjct: 97  SRKMDSFGIPHNVYTLNVLINSFCHL-NRVNFAFSVLAKILKLGCQPDTASFTTLIKGLC 155

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK------------ 178
                G  L  FD+M   GF P+      +++ L K G     I++L+            
Sbjct: 156 LEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVV 215

Query: 179 --------------ETQLPNF--------LSFNIALCN-----LCKLNDVSNVKDVIGMM 211
                         +TQ  N         +S NI  CN     LC L +  +V  ++  M
Sbjct: 216 VYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEM 275

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
           V     PN      +++  CK G +A+A+ ++ +M   G    V  +T LIDG      +
Sbjct: 276 VDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEM 335

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           D A  +++ MV  GC+PNV +Y +LI G+ + +    A    + +  +   P+ V +N L
Sbjct: 336 DEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTL 395

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC----LSGRFSLLPKLVCGLE 387
           I  L  +G   DA+ ++  ++    +PD  T+  LL  +C    L    +LL K + G  
Sbjct: 396 IHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALL-KAIEGSN 454

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
           ++ D+ +Y  ++   C+AG    A  L++ +  KG  P+ +++  +  GLC    +DEA 
Sbjct: 455 LDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEAT 514

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            ++  +  N  + +   +  I    +      +AIQL    +   +  DV + T+ +  L
Sbjct: 515 KLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGML 574

Query: 508 LEGGRTE-EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
            + G  + EA+ L     H+ +       +V    FCKE +I  + +++ D+ D   EL+
Sbjct: 575 SDDGLDQSEAHKLEDMFPHLRI-------QVKDTVFCKEDDINALGKVISDLNDWLEELE 627



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 119/492 (24%), Positives = 214/492 (43%), Gaps = 17/492 (3%)

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNI 190
           Y  VL    +M  FG   N +  N++++    + RV+       K+LK    P+  SF  
Sbjct: 90  YSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTT 149

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +  LC    +     +   M+ +GF P+V ++  L+N  CK G  + A +LL  M    
Sbjct: 150 LIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGN 209

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
               V  +  LI    + R+   A  L+ +M+  G SPN+VT  SL+        +    
Sbjct: 210 CQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVN 269

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
           + L+ +      P+ +    ++D L K G    A DV D + +  + PD  T+ +L+   
Sbjct: 270 TLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGH 329

Query: 371 CLSGR-------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           CL          F ++    C      ++  YN L++ +CK    ++A+ L+  M  +  
Sbjct: 330 CLRSEMDEAVKVFDMMVHKGCA----PNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKL 385

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
            P+  ++  L+ GLC   ++ +AI +++ +V      +   +  ++D L +     KA+ 
Sbjct: 386 IPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMA 445

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           L +         D+  YT+ I G+   G  E+A  L+S +    + PN +TY +M    C
Sbjct: 446 LLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLC 505

Query: 544 KERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           K   +    +L  ++ +     D  T   +T+   + + +S A+  L EM   G   D  
Sbjct: 506 KRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVS 565

Query: 604 WRKL--GLLSDE 613
              L  G+LSD+
Sbjct: 566 TTTLLVGMLSDD 577



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 181/388 (46%), Gaps = 5/388 (1%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+ + F   L ++ K+   S V  +   M   G   NV    +L+N FC + R+  A+ +
Sbjct: 72  PSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSV 131

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           L  ++ LG      ++T LI G     ++  A +L++KM+  G  P+VV Y +LI G  +
Sbjct: 132 LAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCK 191

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
               S A   L  +E     PD+V +  LI  L K      A +++  ++   + P+  T
Sbjct: 192 TGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVT 251

Query: 363 FCSLLSTVCLSGRF----SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
             SL+  +C  G +    +LL ++V   ++  + +    ++   CK G   QA  + + M
Sbjct: 252 CNSLVYALCNLGEWKHVNTLLNEMV-DSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMM 310

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
              G  PD  ++  L+ G C   ++DEA+ V+  +V    A N   +  +++   +  R 
Sbjct: 311 FQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERM 370

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            KA+ LF     +K   + V+Y   I GL   GR ++A  L+ +M      P+  TYR++
Sbjct: 371 DKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRIL 430

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELD 566
           L   CK  ++     LL+ +  + ++ D
Sbjct: 431 LDYLCKNCHLDKAMALLKAIEGSNLDPD 458



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/372 (24%), Positives = 156/372 (41%), Gaps = 9/372 (2%)

Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
           + +A      M+ +    S+  +  ++    +++R      L  KM   G   NV T   
Sbjct: 55  LDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNV 114

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           LI  F      + AFS L  +   G  PD      LI  L   G   +AL ++D ++   
Sbjct: 115 LINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEG 174

Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAV 412
             PD   + +L++ +C +G  S   +L+  +E    + D+VVY  L+   CK     QA 
Sbjct: 175 FQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAF 234

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
            L++ M+ KG +P+  +   L+  LC   +      +   +V +    NA   T +VD L
Sbjct: 235 NLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDAL 294

Query: 473 IEAG---RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
            + G   + H  + +  ++ VE    DVV+YT  I G       +EA  ++  M H    
Sbjct: 295 CKEGMVAQAHDVVDMMFQSGVEP---DVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCA 351

Query: 530 PNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQ 589
           PN ++Y  ++  +CK   +     L +++   ++  +  T   L   +        A+  
Sbjct: 352 PNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIAL 411

Query: 590 LVEMCNLGLIPD 601
             EM   G IPD
Sbjct: 412 FREMVACGQIPD 423



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 120/262 (45%), Gaps = 14/262 (5%)

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
           M SI   FL +L +   +  L F+ +           DDAL  ++ +L +   P    F 
Sbjct: 30  MLSIPSPFLSLLHNRFRSKYLHFNTL-----------DDALSSFNRMLHMHPPPSIVDFA 78

Query: 365 SLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
            +L+++    R+S +  L   ++   +  ++   N L++ FC     N A  +   +L  
Sbjct: 79  KILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKL 138

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
           G  PD  SF  L++GLC   +I EA++++  ++      +  ++  +++ L + G    A
Sbjct: 139 GCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAA 198

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
           I+L R         DVV Y   I  L +  +  +A+ L+S+M    + PN  T   ++ +
Sbjct: 199 IRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYA 258

Query: 542 FCKERNIKMVKRLLQDVIDARI 563
            C     K V  LL +++D++I
Sbjct: 259 LCNLGEWKHVNTLLNEMVDSKI 280


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 190/380 (50%), Gaps = 9/380 (2%)

Query: 172 LGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILL 227
           +G++  KE +    LPN +++N  +   CKL         +  M  KG  PN+  F +++
Sbjct: 1   MGLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMII 60

Query: 228 NCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCS 287
           N  C+ GR+ E  ++L  M   G       +  L++G+ +      A  L  +MV+NG S
Sbjct: 61  NGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLS 120

Query: 288 PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
           PNVVTYTSLI    +A   + A  F D +   G  P+   +  +I+  ++ G  D+A  V
Sbjct: 121 PNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRV 180

Query: 348 YDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLVCGLEVEADLVVYNALLSYFC 403
            + +     +P   T+ +L++  C+ GR      LL  +V G  V  D+V Y+ ++S F 
Sbjct: 181 LNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMV-GKGVLPDVVSYSTIISGFA 239

Query: 404 KAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAH 463
           +    ++A ++   M+ K   PD  ++  L++GLC  R++ EA +++Q ++      +  
Sbjct: 240 RNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEF 299

Query: 464 VHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM 523
            +T +++   + G  +KA+ L    I + +  D V+Y V I GL +  R++EA  L  ++
Sbjct: 300 TYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKL 359

Query: 524 KHIAVPPNAYTYRVMLLSFC 543
            +    P+A TY  ++ + C
Sbjct: 360 FYDDSIPSAVTYNTLIENCC 379



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 129/521 (24%), Positives = 222/521 (42%), Gaps = 57/521 (10%)

Query: 137 MVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIAL 192
           M L  F EM R G  PN    N ++D   K+ R D     L+   L    PN ++FN+ +
Sbjct: 1   MGLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMII 60

Query: 193 CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
             LC+   +    +V+  M RKG+ P+   +  L+N +CK G   +A  L   M+  G S
Sbjct: 61  NGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLS 120

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
            +V  +T LI+   +   L+ A   +++M   G  PN  TYT++I GF +  +   A+  
Sbjct: 121 PNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRV 180

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVY------------------------ 348
           L+ +   G  P +V +N LI+    +G  ++A+ +                         
Sbjct: 181 LNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFAR 240

Query: 349 ----DGLLELKL-------VPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVV 394
               D   ++K+       +PD+ T+ SL+  +C   R +    +   +  +++  D   
Sbjct: 241 NQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFT 300

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV----- 449
           Y  L++ +CK G  N+A+ L++ M+ KGF PD  ++  L+ GL    +  EA  +     
Sbjct: 301 YTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLF 360

Query: 450 ----------YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
                     Y  ++ N   +      A+V      G   +A Q+F   I + +  +   
Sbjct: 361 YDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAI 420

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           Y V I G    G   +AY LY +M H+   P+  T   ++ +   E     +  ++ D++
Sbjct: 421 YNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDIL 480

Query: 560 DARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
            +    D   S  L +   K  +     N L EM   GLIP
Sbjct: 481 RSCKLTDAELSKVLVEINQKEGNMDMVFNLLTEMAKDGLIP 521



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 86/329 (26%), Positives = 160/329 (48%), Gaps = 7/329 (2%)

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
           +++M +NGC PNVVTY ++I G+ + K    AF FL  +  +G  P+L+  N++I+ L +
Sbjct: 6   FKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCR 65

Query: 338 MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE-----VEADL 392
            G   +  +V   +     VPD  T+ +L++  C  G F     LV   E     +  ++
Sbjct: 66  DGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFH--QALVLHAEMVRNGLSPNV 123

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           V Y +L++  CKAG  N+A++ ++ M  +G  P+  ++  ++ G      +DEA  V   
Sbjct: 124 VTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNE 183

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           +  +    +   + A+++     GR  +AI L +  + +    DVVSY+  I G      
Sbjct: 184 MTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQE 243

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
            + A+ +  +M   +V P+A TY  ++   C++R +     + Q+++  ++  D  T   
Sbjct: 244 LDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTT 303

Query: 573 LTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           L     K    + A++   EM   G +PD
Sbjct: 304 LINAYCKEGDLNKALHLHDEMIQKGFLPD 332



 Score = 40.0 bits (92), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 29/142 (20%), Positives = 60/142 (42%)

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
           N   +  ++D   +  R  +A    R   ++    +++++ + I GL   GR +E   + 
Sbjct: 17  NVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEVL 76

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKF 580
            +M      P+  TY  ++  +CKE N      L  +++   +  +  T   L   + K 
Sbjct: 77  VEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKA 136

Query: 581 HSSSSAVNQLVEMCNLGLIPDE 602
            + + A+    +M   GL P+E
Sbjct: 137 GNLNRAMEFFDQMHVRGLCPNE 158


>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 108/432 (25%), Positives = 214/432 (49%), Gaps = 39/432 (9%)

Query: 136 GMVLEAFDEMGRF---GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSF 188
           G V E+ +   R    G   +  +   +++ L KIG+    +++L++ +     P+ + +
Sbjct: 133 GQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMY 192

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           N  +  LCK   V +  D+   M  K  +PNV  +  L+  FC +G++ +A+ LL  M+ 
Sbjct: 193 NTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVL 252

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
              + +V  +  L+DG  +  ++  A  L   M++ G  P+V TY +L+ G+   K    
Sbjct: 253 KNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGK 312

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A +  +++   G   D+  ++V+I  LSKM   D+A+D+++G+    ++PD         
Sbjct: 313 AKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPD--------- 363

Query: 369 TVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
                                  +V Y++L+   CK+G  N A+K  + M D+G  P+  
Sbjct: 364 -----------------------VVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVI 400

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
           ++  L+  LC + ++D+AI + + I       N + +  +VD L + GR   A ++F+  
Sbjct: 401 TYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDL 460

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
           +++ + +DVV+Y++ I GL +    +EA  L S+M+     P+A  Y  ++ +F ++   
Sbjct: 461 LMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMN 520

Query: 549 KMVKRLLQDVID 560
              ++LL+++ID
Sbjct: 521 DKAEKLLREMID 532



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/473 (22%), Positives = 224/473 (47%), Gaps = 9/473 (1%)

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCN 194
           +++F+ M R    P       ++  L K     + I + +  +L     N+++ NI + +
Sbjct: 34  IDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINS 93

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
            C L  +++   V   +++ G+ P++  +  L+   C  G++ E+      +++ G  L 
Sbjct: 94  YCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLD 153

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS-FL 313
             ++  LI+G  ++ +   A  L  K+    C P+VV Y ++I G  + K+   AF  + 
Sbjct: 154 HVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYC 213

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           +M E     P++V +  LI     +G  D A  + + ++   + P+  TF +L+  +C  
Sbjct: 214 EMFEKRVF-PNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKE 272

Query: 374 GRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           G+      LV  +  E    D+  YNAL+  +       +A  ++N M   G T D +S+
Sbjct: 273 GKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSY 332

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             ++ GL   + +DEA+++++G+   N   +   +++++D L ++GR + A++       
Sbjct: 333 SVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHD 392

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
              P +V++YT  I  L +  + ++A  L  ++K   +  N YTY +++   CK+  +  
Sbjct: 393 RGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTD 452

Query: 551 VKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
            +++ QD++     +D  T   +   + K      A+  L +M + G +PD +
Sbjct: 453 AQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAI 505



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 80/344 (23%), Positives = 150/344 (43%), Gaps = 51/344 (14%)

Query: 137 MVLEAFD---EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFN 189
           +V +AFD   EM      PN      ++     +G++D    +L E  L    PN  +FN
Sbjct: 204 LVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFN 263

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
             +  LCK   +   K ++ +M+++G  P+V  +  L++ +  +    +A  +  +M  +
Sbjct: 264 TLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQM 323

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           G +  V++++V+I G  +++ LD A  L+E M      P+VV Y+SLI G  ++   + A
Sbjct: 324 GVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSA 383

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
             ++D +   G  P+++ +  LID L K    D A+ +   + +  +  + YT+  L+  
Sbjct: 384 LKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDG 443

Query: 370 VCLSGRFSLLPK-------------------LVCGLEVEA-------------------D 391
           +C  GR +   K                   ++ GL  E+                   D
Sbjct: 444 LCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPD 503

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTML------DKGFTPDNYS 429
            + Y  +++ F +    ++A KL   M+      D G T D Y 
Sbjct: 504 AIAYETIINAFFEKDMNDKAEKLLREMIDCVDYKDNGDTCDQYD 547


>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 557

 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 112/451 (24%), Positives = 208/451 (46%), Gaps = 21/451 (4%)

Query: 7   RSLFYTAQRTQILKTIISFKSIHQISSPKVCATTHQDFPIILAPHIVHSTLLNCPSDLIA 66
           R L       + L+ + S   +   ++P  CA   +              L  C  D++A
Sbjct: 67  RGLVRRGDLEEALRLVESMSGLEPSAAPGPCAALIKKLCASGRTAEARRVLAACEPDVMA 126

Query: 67  LSFFI--WC------AKQR---DYFHDVQSFDHMISVVTRLTGRFETVRGIV--GELARV 113
            +  +  +C      A +R   D   +  S+ +  +++  L GR  T   +V   ++ R 
Sbjct: 127 YNAMVAGYCVTGQLDAARRLVADMPMEPDSYTYN-TLIRGLCGRGRTGNALVVLDDMLRR 185

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG 173
           GCV    T+ + L    +   Y   ++  DEM   G  P+    N+V++ + + GRVD  
Sbjct: 186 GCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDA 245

Query: 174 IKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
           I+ LK        PN +S+NI L  LC      + + ++  M +KG+ PNV  F +L++ 
Sbjct: 246 IEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISF 305

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
            C+ G +  A ++L  +   G + +  ++  ++  F + +++D A    E MV  GC P+
Sbjct: 306 LCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPD 365

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
           +V+Y +L+           A   L  L+ +G  P L+ +N +ID L+K G   +AL++ +
Sbjct: 366 IVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLN 425

Query: 350 GLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAG 406
            ++   L PD  T+ ++ S +C   R     +  C ++   +  + V+YNA+L   CK  
Sbjct: 426 EMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRR 485

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
             + A+ L+  M+  G  P+  ++  L+ GL
Sbjct: 486 ETHNAIDLFIYMISNGCMPNESTYTILIEGL 516



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 97/399 (24%), Positives = 181/399 (45%), Gaps = 39/399 (9%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGM 210
           P+  A N ++      G++D   +++ +  + P+  ++N  +  LC      N   V+  
Sbjct: 122 PDVMAYNAMVAGYCVTGQLDAARRLVADMPMEPDSYTYNTLIRGLCGRGRTGNALVVLDD 181

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M+R+G  P+V  + ILL   CK     +A +LL  M   G +  +  + V+++G  +  R
Sbjct: 182 MLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGR 241

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           +D A    + +  +GC PN V+Y  ++KG   A+ +  A   +  +  +G+ P++V  N+
Sbjct: 242 VDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNM 301

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS---GRFSLLPKLVCGLE 387
           LI  L + G  + A++V D + +    P+S ++  +L   C      R     +L+    
Sbjct: 302 LISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRG 361

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
              D+V YN LL+  C+ G  + AV+L + + DKG TP   S+  ++ GL          
Sbjct: 362 CYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGL---------- 411

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
                                     +AG+  +A++L    + +    D+++Y+    GL
Sbjct: 412 -------------------------TKAGKTKEALELLNEMVTKGLQPDIITYSTISSGL 446

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
               R EEA   + +++ + + PN   Y  +LL  CK R
Sbjct: 447 CREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRR 485



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 102/421 (24%), Positives = 172/421 (40%), Gaps = 32/421 (7%)

Query: 226 LLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
           L+   C  GR AEA ++L           V A+  ++ G+    +LD A  L   M    
Sbjct: 100 LIKKLCASGRTAEARRVLA-----ACEPDVMAYNAMVAGYCVTGQLDAARRLVADMPM-- 152

Query: 286 CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL 345
             P+  TY +LI+G         A   LD +   G  PD+V + +L++   K   Y  A+
Sbjct: 153 -EPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAM 211

Query: 346 DVYDGLLELKLVPDSYTFCSLLSTVCLSGR-------FSLLPKLVCGLEVEADLVVYNAL 398
            + D +      PD  T+  +++ +C  GR          LP   C    E + V YN +
Sbjct: 212 KLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGC----EPNTVSYNIV 267

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           L   C A     A KL   M  KG+ P+  +F  L+  LC    ++ A+ V   I     
Sbjct: 268 LKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGC 327

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK--YPLDVVSYTVAIRGLLEGGRTEEA 516
             N+  +  I+    +  +  +A+  F   +V +  YP D+VSY   +  L  GG  + A
Sbjct: 328 TPNSLSYNPILHAFCKQKKMDRAMA-FVELMVSRGCYP-DIVSYNTLLTALCRGGEVDAA 385

Query: 517 YILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKF 576
             L  Q+K     P   +Y  ++    K    K    LL +++   ++ D  T   ++  
Sbjct: 386 VELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSG 445

Query: 577 IFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLS----DETMTPVSLF-----DGFVPC 627
           + +      A+    ++ ++G+ P+ +     LL      ET   + LF     +G +P 
Sbjct: 446 LCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPN 505

Query: 628 E 628
           E
Sbjct: 506 E 506



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/249 (23%), Positives = 111/249 (44%), Gaps = 5/249 (2%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
           Q+ Y  +V +F+ +IS + R  G  E    ++ ++ + GC   + ++   L  + + +  
Sbjct: 289 QKGYPPNVVTFNMLISFLCR-RGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKM 347

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIA 191
              +   + M   G  P+  + N ++  L + G VD  +++L + +     P  +S+N  
Sbjct: 348 DRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTV 407

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           +  L K        +++  MV KG  P++  +  + +  C+  RI EA +    +  +G 
Sbjct: 408 IDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGI 467

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
             +   +  ++ G  + R    A  L+  M+ NGC PN  TYT LI+G     +   A  
Sbjct: 468 RPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARE 527

Query: 312 FLDMLESEG 320
            L  L S G
Sbjct: 528 LLGELCSRG 536



 Score = 44.3 bits (103), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 62/152 (40%), Gaps = 27/152 (17%)

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF-------- 485
           LRGL     ++EA+ + + +    P+       A++ +L  +GR  +A ++         
Sbjct: 66  LRGLVRRGDLEEALRLVESMSGLEPSAAPGPCAALIKKLCASGRTAEARRVLAACEPDVM 125

Query: 486 -----------------RRAIVEKYPLDVVSYT--VAIRGLLEGGRTEEAYILYSQMKHI 526
                             R +V   P++  SYT    IRGL   GRT  A ++   M   
Sbjct: 126 AYNAMVAGYCVTGQLDAARRLVADMPMEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRR 185

Query: 527 AVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
              P+  TY ++L + CK    K   +LL ++
Sbjct: 186 GCVPDVVTYTILLEATCKRSGYKQAMKLLDEM 217


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 111/461 (24%), Positives = 220/461 (47%), Gaps = 10/461 (2%)

Query: 122 FLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVL 177
           F  F     R + + +VL+   ++   G   N +  NI+++   +  +         KV+
Sbjct: 91  FSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVM 150

Query: 178 KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIA 237
           K    P+  +FN  +  LC    VS    ++  MV  G  P++  +  ++N  C+ G  +
Sbjct: 151 KLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTS 210

Query: 238 EAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLI 297
            A+ +L  M        V  ++ +ID   R   +D A  L+++M   G   +VVTY SL+
Sbjct: 211 LAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270

Query: 298 KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
           +G  +A  ++     L  + S    P+++  NVL+D   K G   +A ++Y  ++   + 
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330

Query: 358 PDSYTFCSLLSTVCLSGRFSL---LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKL 414
           P+  T+ +L+   C+  R S    +  L+   +   D+V + +L+  +C     +  +K+
Sbjct: 331 PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKV 390

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
           +  +  +G   +  ++  L++G C + KI  A  ++Q +V +    +   +  ++D L +
Sbjct: 391 FRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCD 450

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
            G+  KA+++F      K  L +V YT  I G+ +GG+ E+A+ L+  +    V PN  T
Sbjct: 451 NGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMT 510

Query: 535 YRVMLLSFCKERNI---KMVKRLLQDVIDARIELDYHTSIR 572
           Y VM+   CK+ ++    ++ R +++  +A  +  Y+T IR
Sbjct: 511 YTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 551



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 102/439 (23%), Positives = 198/439 (45%), Gaps = 8/439 (1%)

Query: 79  YFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMV 138
           Y  D  +F+ +I+ +  L G+      +V  +   GC     T+   +    R     + 
Sbjct: 154 YEPDTTTFNTLINGLC-LEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLA 212

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCN 194
            +   +M       + F  + ++D L + G +D  I + KE +      + +++N  +  
Sbjct: 213 FDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           LCK    ++   ++  MV +   PNV  F +LL+ F K G++ EA +L   MIT G S +
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           +  +  L+DG+    RL  A  + + MV+N CSP++VT+TSLIKG+   K          
Sbjct: 333 IITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFR 392

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            +   G   + V +++L+    + G    A +++  ++   ++PD  T+  LL  +C +G
Sbjct: 393 NISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNG 452

Query: 375 RFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
           +     ++   L+   ++  +V+Y  ++   CK G    A  L+ ++  KG  P+  ++ 
Sbjct: 453 KLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYT 512

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            ++ GLC    + EA  + + +  +  A N   +  ++   +  G    + +L       
Sbjct: 513 VMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSC 572

Query: 492 KYPLDVVSYTVAIRGLLEG 510
            +  D  S  + I  LL G
Sbjct: 573 GFSADASSIKMVIDMLLSG 591



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/381 (22%), Positives = 179/381 (46%), Gaps = 20/381 (5%)

Query: 210 MMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV--NAWTVLIDG--- 264
           MM+++    N++ F ++     K G +        L+ T+ + LS     ++ + +G   
Sbjct: 1   MMIQRSITTNLKAFRMVQPHLLKTGTLRT-----DLLCTISSFLSSCERDFSSITNGNVC 55

Query: 265 FR-RLR------RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           FR RLR      + D A  L+++M+++   P +V ++         K F++   F   LE
Sbjct: 56  FRERLRSGIVDIKKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLE 115

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G A ++   N++I+C  +      A  V   +++L   PD+ TF +L++ +CL G+ S
Sbjct: 116 LNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVS 175

Query: 378 LLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
               LV  +     + D+V YN++++  C++G  + A  +   M ++    D +++  ++
Sbjct: 176 KAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTII 235

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
             LC    ID AI++++ +       +   + ++V  L +AG+ +    L +  +  +  
Sbjct: 236 DSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV 295

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
            +V+++ V +   ++ G+ +EA  LY +M    + PN  TY  ++  +C +  +     +
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 355

Query: 555 LQDVIDARIELDYHTSIRLTK 575
           L  ++  +   D  T   L K
Sbjct: 356 LDLMVRNKCSPDIVTFTSLIK 376



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/242 (22%), Positives = 107/242 (44%), Gaps = 14/242 (5%)

Query: 82  DVQSFDHMIS---VVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMV 138
           D+ +F  +I    +V R+    +  R I    ++ G V  A T+ + ++ + +     + 
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNI----SKRGLVANAVTYSILVQGFCQSGKIKLA 422

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF----LSFNIALCN 194
            E F EM   G  P+     I++D L   G+++  +++ ++ Q        + +   +  
Sbjct: 423 EELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEG 482

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           +CK   V +  ++   +  KG  PNV  + ++++  CK G ++EA  LL  M   G + +
Sbjct: 483 MCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPN 542

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
              +  LI    R   L  +  L E+M   G S +  +   +I   +  ++     SFLD
Sbjct: 543 DCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGELDK---SFLD 599

Query: 315 ML 316
           ML
Sbjct: 600 ML 601



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 52/263 (19%), Positives = 109/263 (41%), Gaps = 38/263 (14%)

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNAL 398
           DDA+ ++  ++  + +P    F    S +  + +F+L+      LE+     ++   N +
Sbjct: 70  DDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           ++ FC+      A  +   ++  G+ PD  +F  L+ GLC   K+ +A+           
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAV----------- 178

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
                    +VDR++E G C                 D+V+Y   + G+   G T  A+ 
Sbjct: 179 --------VLVDRMVENG-CQP---------------DMVTYNSIVNGICRSGDTSLAFD 214

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
           +  +M+   V  + +TY  ++ S C++  I     L +++    I+    T   L + + 
Sbjct: 215 MLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274

Query: 579 KFHSSSSAVNQLVEMCNLGLIPD 601
           K    +     L +M +  ++P+
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPN 297


>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 104/420 (24%), Positives = 200/420 (47%), Gaps = 10/420 (2%)

Query: 133 EMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ---LPNFLSFN 189
           E YG++    +     G  P+  A N ++  L K  RV+  +++ +E +   +PN  ++N
Sbjct: 108 EAYGLL----ERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYN 163

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
           I +  LC+   ++   ++   M R G +PNV    I+++  CK  ++ EA  +   M   
Sbjct: 164 ILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDK 223

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
             + +   ++ LIDG  +  R+D A  L+EKM+  G  P  + YTSLI+ F +       
Sbjct: 224 VCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDG 283

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
                 +   G +PDL   N  +DC+ K G  +    ++  +     +PD+ ++  L+  
Sbjct: 284 HKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHG 343

Query: 370 VCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
           +  +G  +   +L   ++ +    D   YNA++  FCK+G  N+A +L   M  KG  P 
Sbjct: 344 LVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPT 403

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
             ++  ++ GL    ++DEA  +++    N   +N  V+++++D   + GR  +A  +  
Sbjct: 404 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIME 463

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
             + +    +V ++   +  L++     EA I +  MK +  PPN  TY +++   C+ R
Sbjct: 464 ELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVR 523



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 105/400 (26%), Positives = 192/400 (48%), Gaps = 13/400 (3%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR +    +  ++   G V  A  +   +R +++        + + EM   G +P+    
Sbjct: 243 GRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLI 302

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N  MD +FK G  + G  + +E      +P+  S++I +  L K    +   ++   M  
Sbjct: 303 NTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKE 362

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +G   +   +  +++ FCK G++ +AYQLL  M   G   +V  +  +IDG  ++ RLD 
Sbjct: 363 QGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDE 422

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L+E+   NG   NVV Y+SLI GF +      A+  ++ L  +G  P++   N L+D
Sbjct: 423 AYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLD 482

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEA 390
            L K    ++AL  +  + +LK  P+  T+  L++ +C   +F+   +  + +  L ++ 
Sbjct: 483 ALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKP 542

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           + + Y  ++S   KAG   +A  L++     G  PD+ S+  ++ GL  A K  +A  ++
Sbjct: 543 NTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALF 602

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
           +   +     N H  T +V  L++A   HKA  L + AIV
Sbjct: 603 EETRLK--GCNIHTKTCVV--LLDA--LHKAECLEQAAIV 636



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 123/549 (22%), Positives = 230/549 (41%), Gaps = 52/549 (9%)

Query: 61  PSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGR--FETVRGIVGELARVGCVIK 118
           PS  I++     C K R      ++FD +I  + +   R  F     ++G         K
Sbjct: 8   PSSNISIELVANCVKSRKL---REAFD-IIQTMRKFKFRPAFSAYTILIG---------K 54

Query: 119 AQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK 178
               LLF  +  +       +E F+++ +    P  +A N ++      G+ D    +L+
Sbjct: 55  VGLMLLFPWVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLE 114

Query: 179 ETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
             +    +P+ +++N  L  L K   V     +   M R    PNV  + IL++  C+ G
Sbjct: 115 RQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREG 173

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
           ++  A ++   M   G   +V    ++ID   + ++L+ A  ++E M    C+PN VT++
Sbjct: 174 KLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFS 233

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
           SLI G  +      A+S  + +   GH P  + +  LI    K G  +D   +Y  ++  
Sbjct: 234 SLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMV-- 291

Query: 355 KLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKL 414
                 +T CS                         DL + N  +    KAG   +   L
Sbjct: 292 ------HTGCS------------------------PDLTLINTYMDCVFKAGETEKGRAL 321

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
           +  +   GF PD  S+  L+ GL  A   +E   ++  +      ++ H + A++D   +
Sbjct: 322 FREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCK 381

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
           +G+ +KA QL     V+ +P  VV+Y   I GL +  R +EAY+L+ + K   +  N   
Sbjct: 382 SGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVV 441

Query: 535 YRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMC 594
           Y  ++  F K   I     ++++++   +  + +T   L   + K    + A+     M 
Sbjct: 442 YSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMK 501

Query: 595 NLGLIPDEM 603
           +L   P+++
Sbjct: 502 DLKCPPNQI 510



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 106/485 (21%), Positives = 209/485 (43%), Gaps = 43/485 (8%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
            G+F+   G++      G +     +   L    +       L  F+EM R    PN   
Sbjct: 103 AGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDA-VPNVPT 161

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            NI++D+L + G+++  +++  + +     PN L+ NI +  LCK   +     +   M 
Sbjct: 162 YNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMD 221

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
            K   PN   F  L++   K GR+ +AY L   M+  G       +T LI  F +  R +
Sbjct: 222 DKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKE 281

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
               ++++MV  GCSP++    + +    +A       +    + + G  PD   +++LI
Sbjct: 282 DGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILI 341

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA-- 390
             L K G  ++  +++  + E   V D++ + +++   C SG+ +   +L+  ++V+   
Sbjct: 342 HGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHP 401

Query: 391 ------------------------------------DLVVYNALLSYFCKAGFPNQAVKL 414
                                               ++VVY++L+  F K G  ++A  +
Sbjct: 402 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLI 461

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
              ++ KG TP+ Y++  LL  L  A +I+EA+  +Q +       N   ++ +++ L  
Sbjct: 462 MEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCR 521

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
             + +KA   ++         + ++YT  I GL + G   EA  L+S+ K     P++ +
Sbjct: 522 VRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSAS 581

Query: 535 YRVML 539
           Y  M+
Sbjct: 582 YNAMI 586



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 95/403 (23%), Positives = 176/403 (43%), Gaps = 63/403 (15%)

Query: 211 MVRKGFYPNVRM-FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR--- 266
           M   GF P+  +  E++ NC  K  ++ EA+ ++  M       + +A+T+LI       
Sbjct: 1   MSLSGFGPSSNISIELVANCV-KSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLML 59

Query: 267 -------RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
                  +  RLD A  L+E++ QN   P    Y ++I G+  A  F  A+  L+  +++
Sbjct: 60  LFPWVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAK 119

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
           G  P ++ +N ++ CL K    ++AL +++  ++   VP+  T+  L+  +C  G     
Sbjct: 120 GSIPSVIAYNCILTCLGKKRRVEEALRIFEE-MKRDAVPNVPTYNILIDMLCREG----- 173

Query: 380 PKLVCGLEVEADL---------VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
            KL   LE+  D+         +  N ++   CKA    +A  ++  M DK  TP+  +F
Sbjct: 174 -KLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTF 232

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV--------------------- 469
             L+ GL    ++D+A ++Y+ ++       A V+T+++                     
Sbjct: 233 SSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVH 292

Query: 470 --------------DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
                         D + +AG   K   LFR      +  D  SY++ I GL++ G   E
Sbjct: 293 TGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANE 352

Query: 516 AYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
            Y L+  MK      + + Y  ++  FCK   +    +LL+++
Sbjct: 353 TYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEM 395


>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/441 (24%), Positives = 204/441 (46%), Gaps = 39/441 (8%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET----QLPNFLSFNIALCNLCKLN 199
           +M + G  PN+     ++  L +  +V   +K+L+E      +P+  +FN  +  LCK+N
Sbjct: 243 DMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVN 302

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL---------------- 243
            + +   ++  M+ +GFYP+   +  LL+  C++G++ EA ++L                
Sbjct: 303 KIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLIN 362

Query: 244 ----------------GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCS 287
                             MI  G    +  + +L+ G  +   L  A  L  +M + GC 
Sbjct: 363 GYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCE 422

Query: 288 PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
           PNV+TY  L+ G  +A +   A   L  + + G   + V +N LI  L +      AL++
Sbjct: 423 PNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNL 482

Query: 348 YDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE---ADLVVYNALLSYFCK 404
              +      PD +T+ SL+  +C   R     +L   + ++   A+ V YN L+    +
Sbjct: 483 LSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLR 542

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV 464
            G   +A+ L N ML +G T D  ++ GL++  C    I++ + +Y+ ++M+    +   
Sbjct: 543 RGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTIS 602

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
              +++ L + G+   A +  R AI   +  D+V+Y   + GL + GR +EA  L+ +++
Sbjct: 603 CNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQ 662

Query: 525 HIAVPPNAYTYRVMLLSFCKE 545
              V P+A+TY   +   CKE
Sbjct: 663 VEGVRPDAFTYNTFISWQCKE 683



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 138/632 (21%), Positives = 268/632 (42%), Gaps = 55/632 (8%)

Query: 47  ILAPHIVHSTLLNCPSDL-IALSFFIWCAKQRDYFHDVQSFDHMISVVTRL--TGRFETV 103
           IL   +    LL  P D+   L  F     Q+ Y H   +FD     + +L   G+F+ +
Sbjct: 75  ILITPVQLCKLLELPLDVPTLLEIFERVGGQKGYCH---TFDVYYVFINKLGAIGKFKLI 131

Query: 104 RGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF-ARNIVMD 162
             ++ ++   G V +   F++ ++ Y +    G  +    +M        TF + ++V++
Sbjct: 132 DKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLE 191

Query: 163 VLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYP 218
           +L       +   V    L +   P   +F I +  LC  N+V +   ++  M + G  P
Sbjct: 192 ILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVP 251

Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
           N  +++ L++   +  +++EA +LL  M  +G    V  +  +I G  ++ ++  A  L 
Sbjct: 252 NSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLV 311

Query: 279 EKMVQNGCSPNVVTY-------------------------------TSLIKGFMEAKMFS 307
           ++M+  G  P+ +TY                                +LI G++ +    
Sbjct: 312 DRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLK 371

Query: 308 IAFSFL-DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
            A SFL + + + G  PD+  +N+L+  L K GS   A D+ + +      P+  T+  L
Sbjct: 372 EAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAIL 431

Query: 367 LSTVCLSG---RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           ++ +C +G      L+   +    +  + V+YN L+   C+    + A+ L + M  KG 
Sbjct: 432 VNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGC 491

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
            PD +++  L+ GLC   +IDEA  ++  ++++    N   +  ++  L+  G   KA+ 
Sbjct: 492 KPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALT 551

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           L    +     LD ++Y   I+   + G  E+   LY QM    +  +  +  +M+   C
Sbjct: 552 LVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLC 611

Query: 544 KERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           K   +      L+D I+     D  T   +   + K      A+N    +   G+ PD  
Sbjct: 612 KVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAF 671

Query: 604 -------WR-KLGLLSDETMTPV-SLFDGFVP 626
                  W+ K G+++D  +     + +GFVP
Sbjct: 672 TYNTFISWQCKEGMVNDACLFFYRGIENGFVP 703



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 111/464 (23%), Positives = 197/464 (42%), Gaps = 49/464 (10%)

Query: 101 ETVRGIVGELARVGCVIKAQTFL--LFLRIYWRGEM-YGMVLEAFDEMGRFGFT------ 151
           +T   ++  L +V  +  A   +  + LR ++   M YG +L     +G+          
Sbjct: 289 QTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIK 348

Query: 152 ---PNTFARNIVMDVLFKIGRVDLGIKVLKETQL-----PNFLSFNIALCNLCKLNDVSN 203
              PN    N +++     G++      L ET +     P+  ++NI +  LCK   +S 
Sbjct: 349 IPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSF 408

Query: 204 VKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLID 263
            +D++  M R+G  PNV  + IL+N  CK G + EA  +L  M   G +++   +  LI 
Sbjct: 409 ARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLIC 468

Query: 264 GFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP 323
              R  ++ +A  L  +M   GC P++ TY SLI G  +      AF     +  +G   
Sbjct: 469 ALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVA 528

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV 383
           + V +N LI  L + G++  AL + + +L        +  C+L                 
Sbjct: 529 NNVTYNTLIHALLRRGAFQKALTLVNDML--------FRGCTL----------------- 563

Query: 384 CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
                  D + YN L+  FCK G   + ++LY  M+  G   D  S   ++ GLC   K+
Sbjct: 564 -------DKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKV 616

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           D A    +  +      +   + ++++ L + GR  +A+ LF R  VE    D  +Y   
Sbjct: 617 DNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTF 676

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN 547
           I    + G   +A + + +       P+  T+ V++ +  K+ N
Sbjct: 677 ISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSN 720


>gi|449500717|ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g02060, chloroplastic-like [Cucumis sativus]
          Length = 720

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 122/479 (25%), Positives = 222/479 (46%), Gaps = 24/479 (5%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGI---VGELARVGCVIKAQTF 122
           AL FF W A++  Y H  QS+  M+ ++ R      T R     + + +R    ++A+ F
Sbjct: 95  ALQFFNW-AQEMGYTHTEQSYFSMLEILGR-NRHLNTARNFLFSIEKRSRGIVKLEARFF 152

Query: 123 LLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET-- 180
              +R + R  ++   ++ F  M   G +P+    N ++ +L K GR ++  KV  E   
Sbjct: 153 NSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLS 212

Query: 181 ---QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIA 237
                P+  +FNI +   C    V +   +   + R G  P+V  +  L++  C+ G++ 
Sbjct: 213 TYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVT 272

Query: 238 EAYQLLGLMITLGTSLSVN--AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
            AY ++  M      L+ N   +T LI G+   R ++ A  ++E+MV  G   N +TY +
Sbjct: 273 VAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNT 332

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGH-APDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
           LIKG  EA+ F      L+    +G  +PD    N L+ C    G+ DDAL V++ + EL
Sbjct: 333 LIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSEL 392

Query: 355 KLVPDSYTFCSLLSTVCLSGRFS----LLPK------LVCGLEVEADLVVYNALLSYFCK 404
           K+ PDS T+ +L+ ++C  G +     LL K      L+ G   +  +  YN +  Y C+
Sbjct: 393 KIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCE 452

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV 464
            G   +A K +  ++ +G T D  S+  L+ G C     +    +   ++  +   +   
Sbjct: 453 TGKTKKAEKAFRQLMRRG-TQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFXPDFET 511

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM 523
           + ++++ L+   +   A+Q   + +   +  +  ++   +  LLE GR  E+  L   M
Sbjct: 512 YESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRASESASLIQLM 570



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/341 (22%), Positives = 157/341 (46%), Gaps = 18/341 (5%)

Query: 237 AEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA-GYLW--EKMVQNGCSPNVVTY 293
           ++A Q       +G + +  ++  +++   R R L+ A  +L+  EK  +         +
Sbjct: 93  SKALQFFNWAQEMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGIVKLEARFF 152

Query: 294 TSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE 353
            SL++ F  A +F  +     +++S G +P +V  N L+  L K G  + A  VYD +L 
Sbjct: 153 NSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLS 212

Query: 354 L-KLVPDSYTFCSLLSTVCLSGR-------FSLLPKLVCGLEVEADLVVYNALLSYFCKA 405
              + PD++TF  L+   C++G        F+ L +  C    E D+V YN L+   C+A
Sbjct: 213 TYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGC----EPDVVTYNTLVDGLCRA 268

Query: 406 GFPNQAVKLYNTMLDKG--FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAH 463
           G    A  +   M  K     P+  ++  L+RG C  R+I++A+ V++ +V      N  
Sbjct: 269 GKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNI 328

Query: 464 VHTAIVDRLIEAGRCHKAIQLFRRAIVE-KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQ 522
            +  ++  L EA +  K   +      +  +  D  ++   +      G  ++A  ++ +
Sbjct: 329 TYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFER 388

Query: 523 MKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           M  + + P++ TY  ++ S C+  + +  + LL  +++ +I
Sbjct: 389 MSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKI 429



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 106/539 (19%), Positives = 206/539 (38%), Gaps = 93/539 (17%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGE-LARVGCVIKAQTFLLFLRIYWRGEMYGMVLE 140
            V +F+ +++++ +  GR    + +  E L+  G      TF + +R +    M      
Sbjct: 183 SVVTFNSLLTILLK-RGRTNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFR 241

Query: 141 AFDEMGRFGFTPNTFARNIVMDVLFKIGRV---------------DLGIKVLKETQL--- 182
            F+++ RFG  P+    N ++D L + G+V               DL   V+  T L   
Sbjct: 242 IFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRG 301

Query: 183 -----------------------PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG-FYP 218
                                   N +++N  +  LC+      +KD++      G F P
Sbjct: 302 YCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSP 361

Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
           +   F  L++C C  G + +A ++   M  L        ++ L+    +    + A  L 
Sbjct: 362 DTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLL 421

Query: 279 EKMVQ-------NGCSPNVV----------------------------------TYTSLI 297
           +K+++       +GC P V                                   +Y +LI
Sbjct: 422 DKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPPSYKTLI 481

Query: 298 KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
            G  +   F   +  L ++  +   PD   +  LI+ L  M     AL   + +L     
Sbjct: 482 MGHCKEGTFESGYELLVLMLRKDFXPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHR 541

Query: 358 PDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKL 414
           P+S TF S+L+ +   GR S    L +L+    +  +L      +     AG  ++A +L
Sbjct: 542 PNSSTFHSILAKLLEQGRASESASLIQLMLDKNIRQNLSFSTGCVRLLFGAGMNDKAFQL 601

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
            + +  KG++        L+R LC  RK+ +   +    + ++  V+  +   ++ +L E
Sbjct: 602 VHLLYGKGYS---VKMEELIRYLCHCRKVIQGSKLLLFSLESHQFVDMDLCNTVIFQLCE 658

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR-GLLEGGRTEEAYILYSQMKHIAVPPNA 532
             +  +A  L+ + +VE      +S    ++  L  GG+ EEA  +  +M+      N+
Sbjct: 659 INKLSEAFSLYYK-LVEMGVHQQLSCQNQLKVSLKAGGKLEEAESVQKRMERRLKSKNS 716



 Score = 38.9 bits (89), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 49/238 (20%), Positives = 101/238 (42%), Gaps = 35/238 (14%)

Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT--AIVDRLIEAGRCHKAIQLFRR 487
           F  L+R    A    E+I V+   +M +  V+  V T  +++  L++ GR + A +++  
Sbjct: 152 FNSLMRNFNRAGLFQESIKVF--TIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDE 209

Query: 488 AIVEKYPL--DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
            ++  Y +  D  ++ + IRG    G  ++ + +++ +      P+  TY  ++   C+ 
Sbjct: 210 -MLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRA 268

Query: 546 RNIKMVKRLLQDVIDARIELD-----YHTSIR-------LTKFIFKFHSSSSAVNQLVEM 593
             + +   +++ +    ++L+     Y T IR       + K +  F      VNQ ++ 
Sbjct: 269 GKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFE---EMVNQGLKA 325

Query: 594 CNL-------GLIPDEMWRKL-----GLLSDETMTP-VSLFDGFVPCERRAGNANHLL 638
            N+       GL     + K+     G   D T +P    F+  + C   AGN +  L
Sbjct: 326 NNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDAL 383


>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/441 (24%), Positives = 204/441 (46%), Gaps = 39/441 (8%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET----QLPNFLSFNIALCNLCKLN 199
           +M + G  PN+     ++  L +  +V   +K+L+E      +P+  +FN  +  LCK+N
Sbjct: 243 DMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVN 302

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL---------------- 243
            + +   ++  M+ +GFYP+   +  LL+  C++G++ EA ++L                
Sbjct: 303 KIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLIN 362

Query: 244 ----------------GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCS 287
                             MI  G    +  + +L+ G  +   L  A  L  +M + GC 
Sbjct: 363 GYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCE 422

Query: 288 PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
           PNV+TY  L+ G  +A +   A   L  + + G   + V +N LI  L +      AL++
Sbjct: 423 PNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNL 482

Query: 348 YDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE---ADLVVYNALLSYFCK 404
              +      PD +T+ SL+  +C   R     +L   + ++   A+ V YN L+    +
Sbjct: 483 LSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLR 542

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV 464
            G   +A+ L N ML +G T D  ++ GL++  C    I++ + +Y+ ++M+    +   
Sbjct: 543 RGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTIS 602

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
              +++ L + G+   A +  R AI   +  D+V+Y   + GL + GR +EA  L+ +++
Sbjct: 603 CNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQ 662

Query: 525 HIAVPPNAYTYRVMLLSFCKE 545
              V P+A+TY   +   CKE
Sbjct: 663 VEGVRPDAFTYNTFISWQCKE 683



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 138/632 (21%), Positives = 268/632 (42%), Gaps = 55/632 (8%)

Query: 47  ILAPHIVHSTLLNCPSDL-IALSFFIWCAKQRDYFHDVQSFDHMISVVTRL--TGRFETV 103
           IL   +    LL  P D+   L  F     Q+ Y H   +FD     + +L   G+F+ +
Sbjct: 75  ILITPVQLCKLLELPLDVPTLLEIFERVGGQKGYCH---TFDVYYVFINKLGAIGKFKLI 131

Query: 104 RGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF-ARNIVMD 162
             ++ ++   G V +   F++ ++ Y +    G  +    +M        TF + ++V++
Sbjct: 132 DKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLE 191

Query: 163 VLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYP 218
           +L       +   V    L +   P   +F I +  LC  N+V +   ++  M + G  P
Sbjct: 192 ILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVP 251

Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
           N  +++ L++   +  +++EA +LL  M  +G    V  +  +I G  ++ ++  A  L 
Sbjct: 252 NSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLV 311

Query: 279 EKMVQNGCSPNVVTY-------------------------------TSLIKGFMEAKMFS 307
           ++M+  G  P+ +TY                                +LI G++ +    
Sbjct: 312 DRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLK 371

Query: 308 IAFSFL-DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
            A SFL + + + G  PD+  +N+L+  L K GS   A D+ + +      P+  T+  L
Sbjct: 372 EAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAIL 431

Query: 367 LSTVCLSG---RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           ++ +C +G      L+   +    +  + V+YN L+   C+    + A+ L + M  KG 
Sbjct: 432 VNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGC 491

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
            PD +++  L+ GLC   +IDEA  ++  ++++    N   +  ++  L+  G   KA+ 
Sbjct: 492 KPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALT 551

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           L    +     LD ++Y   I+   + G  E+   LY QM    +  +  +  +M+   C
Sbjct: 552 LVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLC 611

Query: 544 KERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           K   +      L+D I+     D  T   +   + K      A+N    +   G+ PD  
Sbjct: 612 KVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAF 671

Query: 604 -------WR-KLGLLSDE-TMTPVSLFDGFVP 626
                  W+ K G+++D  +     + +GFVP
Sbjct: 672 TYNTFISWQCKEGMVNDACSFFYRGIENGFVP 703



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 105/443 (23%), Positives = 196/443 (44%), Gaps = 20/443 (4%)

Query: 101 ETVRGIVGELARVGCVIKAQTFL--LFLRIYWRGEM-YGMVLEAFDEMGRFGFT------ 151
           +T   ++  L +V  +  A   +  + LR ++   M YG +L     +G+          
Sbjct: 289 QTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIK 348

Query: 152 ---PNTFARNIVMDVLFKIGRVDLGIKVLKETQL-----PNFLSFNIALCNLCKLNDVSN 203
              PN    N +++     G++      L ET +     P+  ++NI +  LCK   +S 
Sbjct: 349 IPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSF 408

Query: 204 VKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLID 263
            +D++  M R+G  PNV  + IL+N  CK G + EA  +L  M   G +++   +  LI 
Sbjct: 409 ARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLIC 468

Query: 264 GFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP 323
              R  ++ +A  L  +M   GC P++ TY SLI G  +      AF     +  +G   
Sbjct: 469 ALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVA 528

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV 383
           + V +N LI  L + G++  AL + + +L      D  T+  L+   C  G      +L 
Sbjct: 529 NNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELY 588

Query: 384 CGLEVE---ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
             + ++   AD +  N +++  CK G  + A +     +++GF PD  ++  +L GLC  
Sbjct: 589 EQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKV 648

Query: 441 RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSY 500
            +I EA+N++  + +     +A  +   +    + G  + A   F R I   +    +++
Sbjct: 649 GRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTW 708

Query: 501 TVAIRGLLEGGRTEEAYILYSQM 523
            V +  LL+    E  + +  ++
Sbjct: 709 NVLVYTLLKQSNQENNFFVLDEL 731


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 123/531 (23%), Positives = 228/531 (42%), Gaps = 47/531 (8%)

Query: 120 QTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV---DLGI-K 175
           +  ++  R     EM  +  E  ++M      PN +  N +++   K+G +   +L + K
Sbjct: 184 ELLMMLARFLMIDEMKRVYTEMLNDM----IVPNIYTLNTMVNAYSKMGNIVEANLYVSK 239

Query: 176 VLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF------------------- 216
           + +    P+  ++   +   C+ NDV++   V  MM  KG                    
Sbjct: 240 IFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGR 299

Query: 217 ----------------YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
                           YP VR + ++++      R  E   L   M       +V+ +TV
Sbjct: 300 IDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTV 359

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           ++D   + R+LD +  +  +M++ G  P+VVTY +LI+G+ E      A   L ++ES  
Sbjct: 360 MVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNN 419

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
             P+   +N LI   SK      A+ +   +LE KL P   T+ SL+   C +G F    
Sbjct: 420 CRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAY 479

Query: 381 KLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
           KL+  L+      D   Y+  +   CK+    +A  L+N++ +KG   +   +  L+ G 
Sbjct: 480 KLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGH 539

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
           C A KIDEAI++ + +   +   N+  + +++  + + G+  + + +            V
Sbjct: 540 CKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTV 599

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
            +YT+ I  +L  G  + A  +++QM      P+ YTY   + ++C   N+K  + ++  
Sbjct: 600 ATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMAR 659

Query: 558 VIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE-MWRKL 607
           +I+A +  D  T   L     +   +  A N L  M + G  P   +W  L
Sbjct: 660 MIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNL 710



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 118/537 (21%), Positives = 217/537 (40%), Gaps = 92/537 (17%)

Query: 160 VMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN 219
           ++D L ++ R D  IK     +     S+N  L  L +   +  +K V   M+     PN
Sbjct: 159 LLDFLRQMNRDDNDIKFKLSVR-----SYNELLMMLARFLMIDEMKRVYTEMLNDMIVPN 213

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
           +     ++N + KMG I EA   +  +   G S     +T LI G+ R   ++ A  ++ 
Sbjct: 214 IYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFN 273

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG------------HA----- 322
            M   GC  N V+YT++I G  EA       S    +  +             HA     
Sbjct: 274 MMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGND 333

Query: 323 ------------------PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
                             P++  + V++D + K    D++  + + ++E  LVP   T+ 
Sbjct: 334 RNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYN 393

Query: 365 SLLSTVCLSGRFS-------------------LLPKLVCGL------------------- 386
           +L+   C  GR                        +L+CG                    
Sbjct: 394 ALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLES 453

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
           ++   LV YN+L+   CKAG  + A KL + + + G  PD +++   +  LC +++++EA
Sbjct: 454 KLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEA 513

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
            +++  +       N  ++TA++D   +AG+  +AI L  R   E    +  +Y   I G
Sbjct: 514 CDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYG 573

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           + + G+ +E   +   M  + V P   TY +++    +E +     R+   ++    + D
Sbjct: 574 VCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPD 633

Query: 567 YHTSIRLTKFIFKFHSSSS---AVNQLVEMCNLGLIPDEM--------WRKLGLLSD 612
            +T    T FI  + +S +   A   +  M   G++PD +        + +LGL  D
Sbjct: 634 VYT---YTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYD 687



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 97/446 (21%), Positives = 193/446 (43%), Gaps = 63/446 (14%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
            GR +    +  ++    C    +T+ + +   +  +     ++ F+EM      PN   
Sbjct: 297 AGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHT 356

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
             +++D + K  ++D   ++L E                               M+ KG 
Sbjct: 357 YTVMVDAMCKERKLDESRRILNE-------------------------------MMEKGL 385

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
            P+V  +  L+  +C+ GRI  A ++LGLM +     +   +  LI GF + + +  A  
Sbjct: 386 VPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMT 445

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           L  KM+++  +P++VTY SLI    +A  F  A+  LD+L+  G  PD   ++V ID L 
Sbjct: 446 LLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLC 505

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYN 396
           K    ++A D+++ L E                                  ++A+ V+Y 
Sbjct: 506 KSKRMEEACDLFNSLKEKG--------------------------------IKANEVMYT 533

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
           AL+   CKAG  ++A+ L   M  +   P++ ++  L+ G+C   K+ E +++ + +   
Sbjct: 534 ALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKM 593

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
                   +T +++ ++  G    A ++F + +   +  DV +YT  I      G  +EA
Sbjct: 594 GVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEA 653

Query: 517 YILYSQMKHIAVPPNAYTYRVMLLSF 542
             + ++M    V P++ TY +++ ++
Sbjct: 654 EGMMARMIEAGVMPDSLTYTLLISAY 679



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/252 (22%), Positives = 106/252 (42%), Gaps = 5/252 (1%)

Query: 85  SFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDE 144
           +++ +I V  +  G F++   ++  L   G V    T+ +F+    + +      + F+ 
Sbjct: 461 TYNSLIHVQCK-AGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNS 519

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCKLND 200
           +   G   N      ++D   K G++D  I +L+    E  LPN  ++N  +  +CK   
Sbjct: 520 LKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGK 579

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
           V     ++  M + G  P V  + IL+    + G    A ++   M++ G    V  +T 
Sbjct: 580 VQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTA 639

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
            I  +     +  A  +  +M++ G  P+ +TYT LI  +    +   AF+ L  +   G
Sbjct: 640 FIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAG 699

Query: 321 HAPDLVFHNVLI 332
             P     N LI
Sbjct: 700 CDPSHPIWNNLI 711


>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 646

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 140/566 (24%), Positives = 244/566 (43%), Gaps = 30/566 (5%)

Query: 27  SIHQISSPKVCATTHQDFPIILAPHIVHSTLL----NCPSDLIALSFFIWCAKQRDYFHD 82
           SIHQ++   +  + H+  P  L+P    S+L     + P     LS      K R  F  
Sbjct: 5   SIHQLNP--LTISLHK--PARLSPFFYFSSLPLSSNSTPDAQNELSISPQIFKSRPQFGS 60

Query: 83  VQSFDHMISVVTRLTGRFETVR------GIVGELARVGCVIKAQTFLLFLRIYWRGEMYG 136
            +  D   +   RL   + T R       ++  + R G V+    F+L  +   +  + G
Sbjct: 61  YKLGD---ATFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPG 117

Query: 137 MVLEAFDEMGRFGFTPNTFAR-NIVMDVLFKIGRVDLGIKVL-------KETQLPNFLSF 188
             +  F  M        T    N V++V+ + G      K          +   PN L++
Sbjct: 118 EAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTY 177

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           N+ +  LCKL  +    D    M  K   P+V  +  L+N  CK  R+ EA  LL  M  
Sbjct: 178 NLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQA 237

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
            G   +   + VLID   +   L  A  L + M   GC PN VTY +LI G         
Sbjct: 238 EGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDK 297

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A S L+ + S    P+ V +  +I+ L K    +D + +   + E     + Y + SL+S
Sbjct: 298 ALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLIS 357

Query: 369 TVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
            +   G+      L K +     + ++VVY A +   C+   P++A  +   ML KGF P
Sbjct: 358 GLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLP 417

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           + +++  L++G        +AI V++ ++  +   N    + +++ L E+GR  +A+ ++
Sbjct: 418 NAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVW 477

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM--KHIAVPPNAYTYRVMLLSFC 543
              + E    DVV+Y+  I+GL + G  ++   L+ +M  +     P+  TY ++  + C
Sbjct: 478 THMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALC 537

Query: 544 KERNIKMVKRLLQDVIDARIELDYHT 569
           ++ N+     LL  ++D   + D  T
Sbjct: 538 RQDNLTRAIDLLNSMLDEGCDPDSLT 563



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/314 (24%), Positives = 144/314 (45%), Gaps = 6/314 (1%)

Query: 286 CSPNVVTYTSLIKGFMEAKMFSIAFSFLDML---ESEGHAPDLVFHNVLIDCLSKMGSYD 342
           C   V ++ S++   ++   FS AF F   +    S+G  P+L+ +N++I  L K+G  D
Sbjct: 132 CKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQID 191

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADL---VVYNALL 399
            A+D +  +      PD +T+ +L++ +C   R      L+  ++ E  L   V +N L+
Sbjct: 192 RAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLI 251

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
               K G  ++A KL + M  KG  P+  ++  L+ GLC   K+D+A+++ + +V +   
Sbjct: 252 DALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCV 311

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            N   +  I++ L++  R    + +           +   Y+  I GL + G++E A  L
Sbjct: 312 PNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRL 371

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK 579
           + +M      PN   Y   +   C++      + +LQ+++      +  T   L K  FK
Sbjct: 372 WKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFK 431

Query: 580 FHSSSSAVNQLVEM 593
              S  A+    EM
Sbjct: 432 KGDSQKAILVWKEM 445



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/318 (22%), Positives = 134/318 (42%), Gaps = 7/318 (2%)

Query: 291 VTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDG 350
            T+  LI+ +  ++ F      LD ++ EG         ++     K     +A++ +  
Sbjct: 66  ATFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFFHR 125

Query: 351 LL-ELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLE---VEADLVVYNALLSYFC 403
           +  +L       +F S+L+ +   G FS   K    V G      + +L+ YN ++   C
Sbjct: 126 MANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALC 185

Query: 404 KAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAH 463
           K G  ++AV  +  M  K   PD +++  L+ GLC  R++DEA+ +   +       N  
Sbjct: 186 KLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPV 245

Query: 464 VHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM 523
               ++D L + G   +A +L     ++    + V+Y   I GL   G+ ++A  L  +M
Sbjct: 246 TFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKM 305

Query: 524 KHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSS 583
                 PN  TY  ++    K+R  +    +L  + +   + + +    L   +FK   S
Sbjct: 306 VSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKS 365

Query: 584 SSAVNQLVEMCNLGLIPD 601
            +AV    EM   G  P+
Sbjct: 366 ENAVRLWKEMAEKGCKPN 383



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 90/242 (37%), Gaps = 33/242 (13%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G+ E    +  E+A  GC      +  F+    R E      +   EM   GF PN F  
Sbjct: 363 GKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTY 422

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFY 217
           + +M   FK G     I V KE                               M+ +   
Sbjct: 423 SSLMKGFFKKGDSQKAILVWKE-------------------------------MMSQDMR 451

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
            NV    +LLN  C+ GR+ EA  +   M+  G    V A++ +I G   +  +D    L
Sbjct: 452 HNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKL 511

Query: 278 WEKM--VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
           + +M   +    P+VVTY  L          + A   L+ +  EG  PD +  N+ ++ L
Sbjct: 512 FYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETL 571

Query: 336 SK 337
            +
Sbjct: 572 RE 573


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 113/429 (26%), Positives = 193/429 (44%), Gaps = 26/429 (6%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDV 207
           PN    + ++D L K GR      +  E Q     P+  ++N  +   C     S+ + +
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
           +  M+ +   P+V  +  L+N F K G+  EA +L   M+  G   +   +  +IDGF +
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK 372

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
             RLD A  ++  M   GCSP+V T+T+LI G+  AK        L  +   G   + V 
Sbjct: 373 QDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVT 432

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-------FSLLP 380
           +N LI     +G  + ALD+   ++   + PD  T  +LL  +C +G+       F  + 
Sbjct: 433 YNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQ 492

Query: 381 KLVCGLE-------VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
           K    L+       VE D++ YN L+      G   +A +LY  M  +G  PD  ++  +
Sbjct: 493 KSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF----RRAI 489
           + GLC   ++DEA  ++  +   + + N      +++   +AGR    ++LF    RR I
Sbjct: 553 IDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGI 612

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
           V     D + Y   I G  + G    A  ++ +M    V P+  T R ML  F  +  ++
Sbjct: 613 VA----DAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELE 668

Query: 550 MVKRLLQDV 558
               +L+D+
Sbjct: 669 RAVAMLEDL 677



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 112/469 (23%), Positives = 212/469 (45%), Gaps = 25/469 (5%)

Query: 136 GMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ-----LPNFLS 187
           G ++EA    D M   G  P       ++D + K G     + +L++ +     +PN + 
Sbjct: 198 GRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVI 257

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           ++  + +LCK    S+ +++   M  KG +P++  +  ++  FC  GR ++A QLL  M+
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
               S  V  +  LI+ F +  +   A  L+++M+  G  PN +TY S+I GF +     
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLD 377

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A     ++ ++G +PD+     LID        DD +++   +    LV ++ T+ +L+
Sbjct: 378 AAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLI 437

Query: 368 STVCLSGRFSL---LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM------ 418
              CL G  +    L + +    V  D+V  N LL   C  G    A++++  M      
Sbjct: 438 HGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMD 497

Query: 419 LD-----KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
           LD      G  PD  ++  L+ GL    K  EA  +Y+ +       +   +++++D L 
Sbjct: 498 LDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 557

Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
           +  R  +A Q+F     + +  +VV++   I G  + GR ++   L+ +M    +  +A 
Sbjct: 558 KQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAI 617

Query: 534 TYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHS 582
            Y  ++  F K  NI     + Q++I + +   Y  +I +   +  F S
Sbjct: 618 IYITLIYGFRKVGNINGALDIFQEMISSGV---YPDTITIRNMLTGFWS 663



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 92/400 (23%), Positives = 175/400 (43%), Gaps = 19/400 (4%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           +++  F D+ +++ MI V    +GR+     ++ E+          T+   +  + +   
Sbjct: 282 QEKGIFPDLFTYNSMI-VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV--LKETQ--LPNFLSFNI 190
           +    E +DEM   G  PNT   N ++D   K  R+D    +  L  T+   P+  +F  
Sbjct: 341 FFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTT 400

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +   C    + +  +++  M R+G   N   +  L++ FC +G +  A  L   MI+ G
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSG 460

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQ-----------NGCSPNVVTYTSLIKG 299
               +     L+DG     +L  A  +++ M +           NG  P+V+TY  LI G
Sbjct: 461 VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICG 520

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
            +    F  A    + +   G  PD + ++ +ID L K    D+A  ++  +      P+
Sbjct: 521 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPN 580

Query: 360 SYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYN 416
             TF +L++  C +GR     +L C +    + AD ++Y  L+  F K G  N A+ ++ 
Sbjct: 581 VVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQ 640

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            M+  G  PD  +   +L G     +++ A+ + + + M+
Sbjct: 641 EMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQMS 680



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 87/370 (23%), Positives = 154/370 (41%), Gaps = 45/370 (12%)

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           L  GF  ++ L+ A  L+  M+++   P+VV +  L+   +  +   +  S    +E + 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
              D+   N+LI C         AL  +  + +L L PD  TF +LL  +C+  R S   
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVS--- 166

Query: 381 KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
                                        +A+  ++ M +    P+  +F  L+ GLC  
Sbjct: 167 -----------------------------EALDFFHQMFETTCRPNVVTFTTLMNGLCRE 197

Query: 441 RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR-AIVEKYPLDVVS 499
            +I EA+ +   ++ +        +  IVD + + G    A+ L R+   V     +VV 
Sbjct: 198 GRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVI 257

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           Y+  I  L + GR  +A  L+++M+   + P+ +TY  M++ FC        ++LLQ+++
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317

Query: 560 DARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTPVS 619
           + +I  D  T   L     K      A     EM   G+IP+            T+T  S
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN------------TITYNS 365

Query: 620 LFDGFVPCER 629
           + DGF   +R
Sbjct: 366 MIDGFCKQDR 375



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/295 (23%), Positives = 128/295 (43%), Gaps = 8/295 (2%)

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
           R+ R D+   L++KM +     ++ ++  LIK F        A S    +   G  PD+V
Sbjct: 91  RMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVV 150

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF----SLLPKL 382
               L+  L       +ALD +  + E    P+  TF +L++ +C  GR     +LL ++
Sbjct: 151 TFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRM 210

Query: 383 V-CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD-KGFTPDNYSFVGLLRGLCGA 440
           +  GL+     + Y  ++   CK G    A+ L   M +     P+   +  ++  LC  
Sbjct: 211 MEDGLQPTQ--ITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKD 268

Query: 441 RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSY 500
            +  +A N++  +       +   + +++     +GR   A QL +  +  K   DVV+Y
Sbjct: 269 GRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTY 328

Query: 501 TVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
              I   ++ G+  EA  LY +M    + PN  TY  M+  FCK+  +   + + 
Sbjct: 329 NALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMF 383


>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
          Length = 703

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 120/476 (25%), Positives = 218/476 (45%), Gaps = 17/476 (3%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE-----TQLPNFLSFNIAL 192
            L+  DEM R G  P+    N ++   FK G  +  ++V  +        PN  ++N+ L
Sbjct: 212 ALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVML 271

Query: 193 CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
             LCK      V +V   MV     P+V  + IL++  C+ G +  A ++   +I  G  
Sbjct: 272 DGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLV 331

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
           +    +  L+ GF +  R+  A   W+     G   N+ TY  +IKG  ++ M   A   
Sbjct: 332 IDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIEL 390

Query: 313 LDMLESE-GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
            D+LE +    PD V    LI  L + G  + A  +++         D +++ S+++ +C
Sbjct: 391 WDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLC 450

Query: 372 LSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
             GR     K+   ++ +    +  +YNAL+S FC+    + AV++Y+ M D G +P   
Sbjct: 451 NVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVI 510

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
           ++  L+ GLC A K  EA +V + +V N    +   + +++  L    +   A+ ++++ 
Sbjct: 511 TYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQI 570

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIA-VPPNAYTYRVMLLSFCKERN 547
           + +   +DV+ + + I GL   G+ +EA  ++S MK     PPN  TY  ++    +   
Sbjct: 571 LYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGY 630

Query: 548 IKMVKRLLQDVIDARIELD---YHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           I     L   + +  +E D   Y+T I+      + H     +  L E+ + G+IP
Sbjct: 631 IDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIH---EGIQLLDEVLSRGIIP 683



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 107/497 (21%), Positives = 219/497 (44%), Gaps = 46/497 (9%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGR-FGFTPNTFAR 157
           R +    ++ E+ R G       +   L   ++   +  V+  +D++ +  G  PN    
Sbjct: 208 RLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATY 267

Query: 158 NIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N+++D L K GR     ++  +++     P+ +++ I +  LC+  DV     V   +++
Sbjct: 268 NVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIK 327

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G   +  M+  L+  FC+ GR+ EA++        G   ++  + ++I G      +D 
Sbjct: 328 TGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDE 386

Query: 274 AGYLWEKMVQN-GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
           A  LW+ + ++  C P+ VT+ +LI G  +    + AF+  +     G   D+  ++ +I
Sbjct: 387 AIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMI 446

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VE 389
           + L  +G   DA+ VY+ + +    P+S+ + +L+S  C   R S   ++   +      
Sbjct: 447 NGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCS 506

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
             ++ YN L+   CKA    +A  +   M++ GFTPD  ++  L+RGL   +KID+A+++
Sbjct: 507 PTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSI 566

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK----------------- 492
           ++ I+     V+  +H  ++  L  AG+  +A+ +F     +K                 
Sbjct: 567 WKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLY 626

Query: 493 -------------------YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
                                 D++SY   I+GL    R  E   L  ++    + P   
Sbjct: 627 ETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVI 686

Query: 534 TYRVMLLSFCKERNIKM 550
           T+ +++ +  K   I++
Sbjct: 687 TWNILVRAVIKYGPIQV 703



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 106/494 (21%), Positives = 207/494 (41%), Gaps = 13/494 (2%)

Query: 123 LLFLRIYWRGEMYGMVLEAFDEMGR-FGFTPNTFARNIVMDVLFKIGR--------VDLG 173
           L+ L  + R  M    L+AF  +    G  P   + N ++D   +  R          L 
Sbjct: 87  LVVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLS 146

Query: 174 IKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKM 233
                    PN  ++NI L +LC   D+     +   + R+   P+   +  L+    K 
Sbjct: 147 HGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQ 206

Query: 234 GRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN-GCSPNVVT 292
            R+  A  LL  M   G    V  +  L+ G  +    +    +W+K+V++ G  PN+ T
Sbjct: 207 DRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLAT 266

Query: 293 YTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
           Y  ++ G  +   F       + + +    PD++ + +LI  L + G  D A  VY  ++
Sbjct: 267 YNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEII 326

Query: 353 ELKLVPDSYTFCSLLSTVCLSGRFSLLPKL--VCGLEVEADLVVYNALLSYFCKAGFPNQ 410
           +  LV D+  + SL+   C +GR     K     G     +L  YN ++     +G  ++
Sbjct: 327 KTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDE 386

Query: 411 AVKLYNTM-LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
           A++L++ +  D    PD  +F  L+ GLC     ++A  +++   ++   ++   +++++
Sbjct: 387 AIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMI 446

Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
           + L   GR   A++++ +   +    +   Y   I G  +  RT +A  +YS+M      
Sbjct: 447 NGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCS 506

Query: 530 PNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQ 589
           P   TY  ++   CK    +    + +++++     D  T   L + +F       A++ 
Sbjct: 507 PTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSI 566

Query: 590 LVEMCNLGLIPDEM 603
             ++   GL  D M
Sbjct: 567 WKQILYKGLKVDVM 580



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 103/442 (23%), Positives = 189/442 (42%), Gaps = 52/442 (11%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV ++  +I  + R +G  +    +  E+ + G VI A  +   ++ + +    G V EA
Sbjct: 298 DVITYGILIHGLCR-SGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQA---GRVQEA 353

Query: 142 FDEMGRFGFTP--NTFARNIVMDVLFKIGRVDLGIKVLKETQ-----LPNFLSFNIALCN 194
           +      GF    N    NI++  LF  G VD  I++    +     +P+ ++F   +  
Sbjct: 354 WKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHG 413

Query: 195 LCKLNDVSNVKDVIGMMVR-KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
           LC+ N  +N    I    R  G   +V  +  ++N  C +GR+ +A ++   M   G   
Sbjct: 414 LCQ-NGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKP 472

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
           + + +  LI GF ++ R   A  ++ KM  NGCSP V+TY +LI G  +A+ +  A S  
Sbjct: 473 NSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVA 532

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
             +   G  PD+  +  LI  L      DDAL ++  +L   L  D      L+  +C +
Sbjct: 533 REMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSA 592

Query: 374 GRFSLLPKLVCGLEVE----ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
           G+      +   ++ +     +LV YN L+    + G+ ++A  L+ ++ + G  PD  S
Sbjct: 593 GKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIIS 652

Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
           +   ++GLC   +I                                   H+ IQL    +
Sbjct: 653 YNTRIKGLCSCDRI-----------------------------------HEGIQLLDEVL 677

Query: 490 VEKYPLDVVSYTVAIRGLLEGG 511
                  V+++ + +R +++ G
Sbjct: 678 SRGIIPTVITWNILVRAVIKYG 699


>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
 gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
          Length = 755

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 135/536 (25%), Positives = 227/536 (42%), Gaps = 26/536 (4%)

Query: 125 FLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET---- 180
           F R     + Y + LE  D+    G  PN      V+D L K   VD    V ++     
Sbjct: 171 FFREGQVEKAYNLFLEMMDQ----GIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRG 226

Query: 181 QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAY 240
             P+  ++N  +           V  ++  M   G  P+   + +LL+  CK GR  EA 
Sbjct: 227 VKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREAR 286

Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
                M   G    V  + +L+ G+     L       + MV NG SPN   +  +   +
Sbjct: 287 LFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAY 346

Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
            +  M   A    + +  +G +PD+V    LID L K+G  DDA+  ++ ++   + P+ 
Sbjct: 347 AKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNI 406

Query: 361 YTFCSLLSTVCLSGR--------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAV 412
           + F SL+  +C  G+        F +L + +C      D V +N L+   C  G   +A 
Sbjct: 407 FVFSSLVYGLCTVGKWEKAEELFFEVLDQGIC-----VDAVFFNTLMCNLCNEGRVMEAQ 461

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
           +L + M+  G  P+  S+  L+ G C   +IDEA  +   +V N    N   +T ++   
Sbjct: 462 RLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGY 521

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
            +A R   A  LFR  +++     V +Y   + GL + GR  EA  LY  M +     + 
Sbjct: 522 CKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDI 581

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVE 592
           YTY ++L   CK   +    ++ + +     +LD  T   +   + K      A++    
Sbjct: 582 YTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFAT 641

Query: 593 MCNLGLIPDEMWRKLGLLSDETMTPVSL--FDGFVPCERRAGNA-NHLLLNGGVGR 645
           +   GL+PD +  +  L+++  +   SL  FDG      ++G A N  +LN  V R
Sbjct: 642 ISAYGLVPDVVTYR--LIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRR 695



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 116/464 (25%), Positives = 210/464 (45%), Gaps = 18/464 (3%)

Query: 91  SVVTRLTGRFETV--RGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRF 148
            VV R  G F+ +  RG+  +     C+I           Y     +  V++  +EM   
Sbjct: 210 QVVDRAKGVFQQMIDRGVKPDNGTYNCLIHG---------YLSTGKWKEVVQMLEEMSTH 260

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLG----IKVLKETQLPNFLSFNIALCNLCKLNDVSNV 204
           G  P+     +++D L K GR          + ++   P+   + I L        +S +
Sbjct: 261 GLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEM 320

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
              + +MV  G  PN R+F I+   + K   I EA  +   M   G S  V ++  LID 
Sbjct: 321 HSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDA 380

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
             +L R+D A   + +M+  G +PN+  ++SL+ G      +  A      +  +G   D
Sbjct: 381 LCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVD 440

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV- 383
            VF N L+  L   G   +A  + D ++ + + P+  ++ +L++  CL+GR     KL+ 
Sbjct: 441 AVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLD 500

Query: 384 --CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
                 ++ +   Y  LL  +CKA   + A  L+  ML KG TP   ++  +L GL    
Sbjct: 501 VMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTG 560

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYT 501
           +  EA  +Y  ++ +    + + +  I++ L +     +A ++FRR   +   LD V++ 
Sbjct: 561 RFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFN 620

Query: 502 VAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
           + I  LL+GGR E+A  L++ +    + P+  TYR++  +  +E
Sbjct: 621 IMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEE 664



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 104/418 (24%), Positives = 192/418 (45%), Gaps = 25/418 (5%)

Query: 129 YWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPN 184
           Y +  M    +  F++M + G +P+  +   ++D L K+GRVD  +    +++ E   PN
Sbjct: 346 YAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPN 405

Query: 185 FLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLG 244
              F+  +  LC +      +++   ++ +G   +   F  L+   C  GR+ EA +L+ 
Sbjct: 406 IFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLID 465

Query: 245 LMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
           LMI +G   +V ++  L+ G     R+D A  L + MV NG  PN  TYT L++G+ +A+
Sbjct: 466 LMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKAR 525

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
               A+S    +  +G  P +  +N ++  L + G + +A ++Y  ++  +   D YT+ 
Sbjct: 526 RVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYN 585

Query: 365 SLLSTVC----LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
            +L+ +C    +   F +  +L C  + + D V +N ++    K G    A+ L+ T+  
Sbjct: 586 IILNGLCKNNFVDEAFKMFRRL-CSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISA 644

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
            G  PD  ++  +   L     + E   ++  +  +  A N+H+  A+V RL+  G    
Sbjct: 645 YGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGD--- 701

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQ---MKHIAVPPNAYTY 535
                 RA V  Y LD  +++      LE   T     LYS+     H    P  Y +
Sbjct: 702 ----ISRAGVYLYKLDEKNFS------LEASTTSMLISLYSRGEYQPHAKSLPEKYRF 749



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 109/457 (23%), Positives = 194/457 (42%), Gaps = 39/457 (8%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           PN  +++I +   C++  + +     G++++ G+  NV +   LL   C   R+ EA  +
Sbjct: 88  PNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDI 147

Query: 243 LGL-MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           L L M   G    V A+  +I+GF R  +++ A  L+ +M+  G  PNVVTYT++I G  
Sbjct: 148 LLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLC 207

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           +A++   A      +   G  PD   +N LI      G + + + + + +    L PD  
Sbjct: 208 KAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCI 267

Query: 362 TFCSLLSTVCLSGRF--------SLLPK------------------------------LV 383
           T+  LL  +C +GR         S+  K                              L+
Sbjct: 268 TYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLM 327

Query: 384 CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
            G  V  +  ++N +   + K     +A+ ++N M  +G +PD  SF  L+  LC   ++
Sbjct: 328 VGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRV 387

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           D+A+  +  ++      N  V +++V  L   G+  KA +LF   + +   +D V +   
Sbjct: 388 DDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTL 447

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           +  L   GR  EA  L   M  + V PN  +Y  ++   C    I    +LL  ++   +
Sbjct: 448 MCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGL 507

Query: 564 ELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           + +  T   L +   K      A +   EM   G+ P
Sbjct: 508 KPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTP 544



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/272 (21%), Positives = 105/272 (38%), Gaps = 14/272 (5%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           LTGR +    ++  +   G      T+ + LR Y +          F EM   G TP   
Sbjct: 488 LTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVA 547

Query: 156 ARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
             N ++  LF+ GR     +L + ++      +  ++NI L  LCK N V     +   +
Sbjct: 548 TYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRL 607

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
             K    +   F I++    K GR  +A  L   +   G    V  + ++ +       L
Sbjct: 608 CSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSL 667

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
                L+  M ++G +PN     +L++  +     S A  +L  L+ +  + +    ++L
Sbjct: 668 GEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSML 727

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
           I   S+ G Y             K +P+ Y F
Sbjct: 728 ISLYSR-GEYQP---------HAKSLPEKYRF 749


>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
 gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 670

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 140/566 (24%), Positives = 244/566 (43%), Gaps = 30/566 (5%)

Query: 27  SIHQISSPKVCATTHQDFPIILAPHIVHSTLL----NCPSDLIALSFFIWCAKQRDYFHD 82
           SIHQ++   +  + H+  P  L+P    S+L     + P     LS      K R  F  
Sbjct: 29  SIHQLNP--LTISLHK--PARLSPFFYFSSLPLSSNSTPDAQNELSISPQIFKSRPQFGS 84

Query: 83  VQSFDHMISVVTRLTGRFETVR------GIVGELARVGCVIKAQTFLLFLRIYWRGEMYG 136
            +  D   +   RL   + T R       ++  + R G V+    F+L  +   +  + G
Sbjct: 85  YKLGD---ATFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPG 141

Query: 137 MVLEAFDEMGRFGFTPNTFAR-NIVMDVLFKIGRVDLGIKVL-------KETQLPNFLSF 188
             +  F  M        T    N V++V+ + G      K          +   PN L++
Sbjct: 142 EAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTY 201

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           N+ +  LCKL  +    D    M  K   P+V  +  L+N  CK  R+ EA  LL  M  
Sbjct: 202 NLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQA 261

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
            G   +   + VLID   +   L  A  L + M   GC PN VTY +LI G         
Sbjct: 262 EGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDK 321

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A S L+ + S    P+ V +  +I+ L K    +D + +   + E     + Y + SL+S
Sbjct: 322 ALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLIS 381

Query: 369 TVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
            +   G+      L K +     + ++VVY A +   C+   P++A  +   ML KGF P
Sbjct: 382 GLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLP 441

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           + +++  L++G        +AI V++ ++  +   N    + +++ L E+GR  +A+ ++
Sbjct: 442 NAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVW 501

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM--KHIAVPPNAYTYRVMLLSFC 543
              + E    DVV+Y+  I+GL + G  ++   L+ +M  +     P+  TY ++  + C
Sbjct: 502 THMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALC 561

Query: 544 KERNIKMVKRLLQDVIDARIELDYHT 569
           ++ N+     LL  ++D   + D  T
Sbjct: 562 RQDNLTRAIDLLNSMLDEGCDPDSLT 587



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/314 (24%), Positives = 144/314 (45%), Gaps = 6/314 (1%)

Query: 286 CSPNVVTYTSLIKGFMEAKMFSIAFSFLDML---ESEGHAPDLVFHNVLIDCLSKMGSYD 342
           C   V ++ S++   ++   FS AF F   +    S+G  P+L+ +N++I  L K+G  D
Sbjct: 156 CKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQID 215

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADL---VVYNALL 399
            A+D +  +      PD +T+ +L++ +C   R      L+  ++ E  L   V +N L+
Sbjct: 216 RAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLI 275

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
               K G  ++A KL + M  KG  P+  ++  L+ GLC   K+D+A+++ + +V +   
Sbjct: 276 DALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCV 335

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            N   +  I++ L++  R    + +           +   Y+  I GL + G++E A  L
Sbjct: 336 PNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRL 395

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK 579
           + +M      PN   Y   +   C++      + +LQ+++      +  T   L K  FK
Sbjct: 396 WKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFK 455

Query: 580 FHSSSSAVNQLVEM 593
              S  A+    EM
Sbjct: 456 KGDSQKAILVWKEM 469



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/318 (22%), Positives = 134/318 (42%), Gaps = 7/318 (2%)

Query: 291 VTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDG 350
            T+  LI+ +  ++ F      LD ++ EG         ++     K     +A++ +  
Sbjct: 90  ATFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFFHR 149

Query: 351 LL-ELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLE---VEADLVVYNALLSYFC 403
           +  +L       +F S+L+ +   G FS   K    V G      + +L+ YN ++   C
Sbjct: 150 MANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALC 209

Query: 404 KAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAH 463
           K G  ++AV  +  M  K   PD +++  L+ GLC  R++DEA+ +   +       N  
Sbjct: 210 KLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPV 269

Query: 464 VHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM 523
               ++D L + G   +A +L     ++    + V+Y   I GL   G+ ++A  L  +M
Sbjct: 270 TFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKM 329

Query: 524 KHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSS 583
                 PN  TY  ++    K+R  +    +L  + +   + + +    L   +FK   S
Sbjct: 330 VSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKS 389

Query: 584 SSAVNQLVEMCNLGLIPD 601
            +AV    EM   G  P+
Sbjct: 390 ENAVRLWKEMAEKGCKPN 407



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 90/242 (37%), Gaps = 33/242 (13%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G+ E    +  E+A  GC      +  F+    R E      +   EM   GF PN F  
Sbjct: 387 GKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTY 446

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFY 217
           + +M   FK G     I V KE                               M+ +   
Sbjct: 447 SSLMKGFFKKGDSQKAILVWKE-------------------------------MMSQDMR 475

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
            NV    +LLN  C+ GR+ EA  +   M+  G    V A++ +I G   +  +D    L
Sbjct: 476 HNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKL 535

Query: 278 WEKM--VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
           + +M   +    P+VVTY  L          + A   L+ +  EG  PD +  N+ ++ L
Sbjct: 536 FYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETL 595

Query: 336 SK 337
            +
Sbjct: 596 RE 597


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/452 (24%), Positives = 201/452 (44%), Gaps = 33/452 (7%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-PNFLSFNIALCNLCKLNDVSNVKDV 207
           G  P+    N+++    K G +D  ++VL    + P+ +++N  L  LC    +    +V
Sbjct: 122 GAVPDVITYNVLISGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEV 181

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
           +   ++K  YP+V  + IL+   CK   + +A +LL  M   G+   V  + VLI+G  +
Sbjct: 182 LDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICK 241

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
             RLD A      M   GC PNV+T+  +++       +  A   L  +  +G +P +V 
Sbjct: 242 EGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVT 301

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE 387
            N+LI+ L + G    A+D+ + +      P+S +                         
Sbjct: 302 FNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLS------------------------- 336

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
                  YN LL  FCK    ++A++  + M+ +G  PD  ++  LL  LC   K+D A+
Sbjct: 337 -------YNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAV 389

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            +   +     +     +  ++D L + G+  +AI+L      +    D+++Y+  + GL
Sbjct: 390 EILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGL 449

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
              G+ +EA   +  ++ + + PNA TY  ++L  CK R        L  +I  R +   
Sbjct: 450 SREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTE 509

Query: 568 HTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLI 599
            T   L + I     +  A++ L E+C+ GL+
Sbjct: 510 ATYTILIEGIAYEGLAKEALDLLNELCSRGLV 541



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 92/360 (25%), Positives = 175/360 (48%), Gaps = 7/360 (1%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           +G+ +    ++    +  C     T+ + +    +    G  ++  DEM   G  P+   
Sbjct: 172 SGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVT 231

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N++++ + K GR+D  IK L         PN ++ NI L ++C      + + ++  M+
Sbjct: 232 YNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDML 291

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
           RKG  P+V  F IL+N  C+ G +  A  +L  M   G + +  ++  L+ GF + +++D
Sbjct: 292 RKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMD 351

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A    + MV  GC P++VTY +L+    +     +A   L+ L S+G +P L+ +N +I
Sbjct: 352 RAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVI 411

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVE 389
           D LSK+G  + A+ + D +    L PD  T+ SL+S +   G+     K    + GL + 
Sbjct: 412 DGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIR 471

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            + + YN+++   CK+   ++A+     M+ K   P   ++  L+ G+       EA+++
Sbjct: 472 PNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDL 531



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 135/290 (46%), Gaps = 12/290 (4%)

Query: 268 LRRLDMAGYL------WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH 321
           LRRL   G L       E MV  G  P+++  TSLI+GF        A   +++LE  G 
Sbjct: 64  LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 123

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPK 381
            PD++ +NVLI    K G  D+AL V D    + + PD  T+ ++L T+C SG+     +
Sbjct: 124 VPDVITYNVLISGYCKSGEIDNALQVLD---RMNVAPDVVTYNTILRTLCDSGKLKQAME 180

Query: 382 LV---CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
           ++      E   D++ Y  L+   CK     QA+KL + M +KG  PD  ++  L+ G+C
Sbjct: 181 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 240

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
              ++DEAI     +       N   H  I+  +   GR   A +L    + +     VV
Sbjct: 241 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV 300

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
           ++ + I  L   G    A  +  +M      PN+ +Y  +L  FCKE+ +
Sbjct: 301 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKM 350



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 99/445 (22%), Positives = 193/445 (43%), Gaps = 45/445 (10%)

Query: 164 LFKIGRVDLGIKVLKET----QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN 219
           L + G ++ G K L+       +P+ +     +   C++        V+ ++ + G  P+
Sbjct: 67  LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 126

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
           V  + +L++ +CK G I  A Q+L  M     +  V  +  ++       +L  A  + +
Sbjct: 127 VITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLD 183

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
           + +Q  C P+V+TYT LI+   +      A   LD + ++G  PD+V +NVLI+ + K G
Sbjct: 184 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 243

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYN 396
             D+A+   + +      P+  T   +L ++C +GR+    KL+  +        +V +N
Sbjct: 244 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 303

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            L+++ C+ G   +A+ +   M   G TP++ S+  LL G C  +K+D AI         
Sbjct: 304 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEY------- 356

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
                       +D ++  G C              YP D+V+Y   +  L + G+ + A
Sbjct: 357 ------------LDIMVSRG-C--------------YP-DIVTYNTLLTALCKDGKVDVA 388

Query: 517 YILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKF 576
             + +Q+      P   TY  ++    K    +   +LL ++    ++ D  T   L   
Sbjct: 389 VEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSG 448

Query: 577 IFKFHSSSSAVNQLVEMCNLGLIPD 601
           + +      A+    ++  LG+ P+
Sbjct: 449 LSREGKVDEAIKFFHDLEGLGIRPN 473



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 123/268 (45%), Gaps = 4/268 (1%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           TGR+     ++ ++ R GC     TF + +    R  + G  ++  ++M   G TPN+ +
Sbjct: 277 TGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLS 336

Query: 157 RNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N ++    K  ++D  I+ L         P+ +++N  L  LCK   V    +++  + 
Sbjct: 337 YNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLS 396

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
            KG  P +  +  +++   K+G+   A +LL  M   G    +  ++ L+ G  R  ++D
Sbjct: 397 SKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVD 456

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A   +  +   G  PN +TY S++ G  +++    A  FL  + S+   P    + +LI
Sbjct: 457 EAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILI 516

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDS 360
           + ++  G   +ALD+ + L    LV  S
Sbjct: 517 EGIAYEGLAKEALDLLNELCSRGLVKKS 544



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 45/203 (22%), Positives = 84/203 (41%), Gaps = 3/203 (1%)

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           L    + G      K   +M+ +G  PD      L+RG C   K  +A  V + +  +  
Sbjct: 64  LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 123

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
             +   +  ++    ++G    A+Q+  R  V     DVV+Y   +R L + G+ ++A  
Sbjct: 124 VPDVITYNVLISGYCKSGEIDNALQVLDRMNVAP---DVVTYNTILRTLCDSGKLKQAME 180

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
           +  +       P+  TY +++ + CKE  +    +LL ++ +   + D  T   L   I 
Sbjct: 181 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 240

Query: 579 KFHSSSSAVNQLVEMCNLGLIPD 601
           K      A+  L  M + G  P+
Sbjct: 241 KEGRLDEAIKFLNNMPSYGCQPN 263


>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
 gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
          Length = 970

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 122/476 (25%), Positives = 221/476 (46%), Gaps = 11/476 (2%)

Query: 136 GMVLEAFD---EMGRFGFTPNTFARNIVMDVLFK---IGRVDLGIKVLKETQLP-NFLSF 188
           G +  A+D   ++GRFGF PN F  N +++ L K   + + +L  K +    LP N +++
Sbjct: 337 GNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTY 396

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           +I + + CK   +   +   G M+  G    +  +  L+N  CK G ++ A  L   MI 
Sbjct: 397 SILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMIN 456

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
            G   +   +T LI G+ +  +++ A  L+ +M +   +P+V T+T+LI G       + 
Sbjct: 457 EGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAE 516

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A    D +      P  V +NV+I+   K  + D A ++ + +L   LVPD+YT+  L+S
Sbjct: 517 ASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLIS 576

Query: 369 TVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
            +C +GR S     +  L    ++ + + Y+ALL  +C  G   +A+     M+ +G   
Sbjct: 577 GLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINM 636

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           D      L+ G    + +     + + +       ++ ++T+++D   + G   K+ +  
Sbjct: 637 DLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECL 696

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
              + EK   +VV+YT  + GL + G  + A  L+ +M    + PN+ TY   L S  KE
Sbjct: 697 DLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKE 756

Query: 546 RNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            N+K    L  +++   +      +I +  F  K      A   L EM   G+ PD
Sbjct: 757 GNMKEATDLHHEMLKGLLANTATYNILIRGFC-KLGRLIEATKVLSEMTENGIFPD 811



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 101/414 (24%), Positives = 178/414 (42%), Gaps = 42/414 (10%)

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCKL 198
           +EM   GF P   A + ++D L K G +D    L +K+ +   LPN   +N  +  LCK 
Sbjct: 312 NEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKG 371

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
            D+   + +   M       N   + IL++ FCK G +  A    G MI  G   ++  +
Sbjct: 372 EDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPY 431

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
             LI+G  +   L  A +L+ KM+  G  P   T+T+LI G+                  
Sbjct: 432 NSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGY------------------ 473

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL 378
                DL                + A  +Y  + E ++ P  YTF +L+  +C +   + 
Sbjct: 474 ---CKDL--------------QVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAE 516

Query: 379 LPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
             KL   +   +++   V YN ++  +CKA   ++A +L   ML  G  PD Y++  L+ 
Sbjct: 517 ASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLIS 576

Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
           GLC   ++  A +    +   N  +N   ++A++      GR  +A+      I     +
Sbjct: 577 GLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINM 636

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
           D+V + V I G ++    +  + L  +M    + P++  Y  M+ ++ KE + K
Sbjct: 637 DLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFK 690



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/387 (23%), Positives = 172/387 (44%), Gaps = 3/387 (0%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+  + +  + +LC+L D    K+ I  M    F  ++  + +L++  CK G + EA ++
Sbjct: 216 PDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEV 275

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
              +   G    V  +  L+ GF R+++ D    L  +MV+ G  P     + L+ G  +
Sbjct: 276 RKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRK 335

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
                 A+  +  L   G  P+L  +N LI+ L K    D A  +Y  +  + L  +  T
Sbjct: 336 KGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVT 395

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
           +  L+ + C  G   +       +    +   +  YN+L++  CK G  + A  LY  M+
Sbjct: 396 YSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMI 455

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
           ++G  P   +F  L+ G C   ++++A  +Y+ +     A + +  TA++  L       
Sbjct: 456 NEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMA 515

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
           +A +LF   +  K     V+Y V I G  +    ++A+ L   M H  + P+ YTYR ++
Sbjct: 516 EASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLI 575

Query: 540 LSFCKERNIKMVKRLLQDVIDARIELD 566
              C    +   K  + D+    ++L+
Sbjct: 576 SGLCSTGRVSAAKDFIDDLHKKNLKLN 602



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 123/534 (23%), Positives = 217/534 (40%), Gaps = 35/534 (6%)

Query: 48  LAPHIVHSTLLNCPSD-LIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGI 106
           L PH V   L+N   D  +AL FF +    ++  H   SF  ++  + +    F     +
Sbjct: 60  LKPHHVEQVLINTLHDSKLALRFFNFLGLHKNMNHTTTSFAILVHALVQ-NKLFWPANSL 118

Query: 107 VGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK 166
           +             T LL      RG     V E F E  +     +T   + ++    +
Sbjct: 119 L------------HTLLL------RGSDPKFVFEKFLESHKQCKFSSTLGFDFLVHSYLQ 160

Query: 167 IGRVDLGIKVLK----ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
             RV   + VL+     T LP   + +  L  L ++     V +V    V  G  P+   
Sbjct: 161 NTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYT 220

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR----LRRLDMAGYLW 278
              ++   C++     A + +  M +    LS+  + VLI G  +    L  L++   L 
Sbjct: 221 CSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLR 280

Query: 279 EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
           EK    G   +VVTY +L+ GF   + F      ++ +   G  P     + L+D L K 
Sbjct: 281 EK----GLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKK 336

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS---GRFSLLPKLVCGLEVEADLVVY 395
           G+ D A D+   L     +P+ + + +L++ +C      +  LL K +  + +  + V Y
Sbjct: 337 GNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTY 396

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
           + L+  FCK G  + A   +  M++ G     Y +  L+ G C    +  A  +Y  ++ 
Sbjct: 397 SILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMIN 456

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
                 A   T ++    +  +  KA +L+R    ++    V ++T  I GL       E
Sbjct: 457 EGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAE 516

Query: 516 AYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
           A  L+ +M    + P   TY VM+  +CK  N+     LL+D++   +  D +T
Sbjct: 517 ASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYT 570



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 100/419 (23%), Positives = 188/419 (44%), Gaps = 20/419 (4%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           FDEM      P     N++++   K   +D   ++L++      +P+  ++   +  LC 
Sbjct: 521 FDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCS 580

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              VS  KD I  + +K    N   +  LL+ +C  GR+ EA      MI  G ++ +  
Sbjct: 581 TGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVC 640

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
             VLIDG  + + +     L +KM   G  P+ V YTS+I  + +   F  +   LD++ 
Sbjct: 641 HAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMV 700

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF- 376
           +E   P++V +   ++ L K+G  D A  +++ +L   + P+S T+   L ++   G   
Sbjct: 701 TEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMK 760

Query: 377 ---SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
               L  +++ GL   A+   YN L+  FCK G   +A K+ + M + G  PD  ++  +
Sbjct: 761 EATDLHHEMLKGLL--ANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTI 818

Query: 434 LRGLCGARKIDEAINVY-----QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR-- 486
           +   C +  +  A+ ++     +G+  ++ A N  ++   V+  ++     +   L R  
Sbjct: 819 IYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGL 878

Query: 487 --RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM-LLSF 542
             R I++    D+      + G    G  + A  LY  M   AV  +   ++ + LLS+
Sbjct: 879 KPRQILQLQKRDLGVCNFLMHGGCVTGEVDTALRLYHSMLTRAVKLSLEMWKCLYLLSY 937



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 94/419 (22%), Positives = 183/419 (43%), Gaps = 42/419 (10%)

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSL--SVNAWTVLIDGFRRLRRLDMAGYLWEK 280
           F+ L++ + +  R+ +A  +L LM  LG +L   V   + +++G  R+R+  +   ++++
Sbjct: 151 FDFLVHSYLQNTRVFDAVVVLRLM--LGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDE 208

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
            V  G  P+  T +++I+   E K F  A   +  +ES      +V +NVLI  L K G 
Sbjct: 209 SVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGG 268

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF-------------------SLLPK 381
             +AL+V   L E  L  D  T+C+L+   C   +F                   + +  
Sbjct: 269 VLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSG 328

Query: 382 LVCGLEVEA-------------------DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
           LV GL  +                    +L VYNAL++  CK    ++A  LY  M    
Sbjct: 329 LVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMN 388

Query: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI 482
              ++ ++  L+   C    +D A + +  ++ +      + + ++++   + G    A 
Sbjct: 389 LPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAE 448

Query: 483 QLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
            L+ + I E       ++T  I G  +  + E+A+ LY +M    + P+ YT+  ++   
Sbjct: 449 FLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGL 508

Query: 543 CKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           C    +    +L  ++++ +I+    T   + +   K H+   A   L +M + GL+PD
Sbjct: 509 CSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPD 567



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/293 (23%), Positives = 125/293 (42%), Gaps = 32/293 (10%)

Query: 134 MYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFN 189
           ++G++ + +D+    G  P++     ++D   K G      + L     E   PN +++ 
Sbjct: 657 LFGLLKKMYDQ----GLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYT 712

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
             +  LCK+ ++     +   M+     PN   +   L+   K G + EA  L   M+  
Sbjct: 713 AFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLK- 771

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           G   +   + +LI GF +L RL  A  +  +M +NG  P+ +TY+++I     +     A
Sbjct: 772 GLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAA 831

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
               D +  +G  PD V  N+LI      G+ D A ++ + +L                 
Sbjct: 832 VELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSR--------------- 876

Query: 370 VCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
                   L P+ +  L+ + DL V N L+   C  G  + A++LY++ML + 
Sbjct: 877 -------GLKPRQILQLQ-KRDLGVCNFLMHGGCVTGEVDTALRLYHSMLTRA 921


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 120/463 (25%), Positives = 216/463 (46%), Gaps = 60/463 (12%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVL----------------FKIGRVDLGIKVLKETQ---- 181
           F EM   GF PN    N V+D L                F  G+++  +++LK+      
Sbjct: 162 FHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRLLKKMSGGGL 221

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
            P+ +++++ +   CK+   +  +++   MVR+G  P+   +  LL+ +   G + + + 
Sbjct: 222 QPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHD 281

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           LL LMI  G  L  + + +LI  + +   LD A   + +M Q G SPNVVTYT++I    
Sbjct: 282 LLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILC 341

Query: 302 EAKMFSIAFSFLDMLESEGHAPDL-----------------------------------V 326
           +A     A S    + SEG +PD+                                   +
Sbjct: 342 KAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAI 401

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLPKL 382
           F N ++D L K G   +A D +D ++ + + PD  ++  L+   CL G+      LL ++
Sbjct: 402 FLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRM 461

Query: 383 VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
           V  + +  D V Y+ALL+ +CK G  + A+ LY  M  K   P+  ++  +L GL  A +
Sbjct: 462 VS-IGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGR 520

Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTV 502
           +  A   Y  IV +   +  + +  ++  L E     +A+++F+    +++ L+V ++ +
Sbjct: 521 VVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNI 580

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
            I GLL+ GR  +A  L+S +    + P+A  Y +M+ S  +E
Sbjct: 581 MIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEE 623



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 118/515 (22%), Positives = 224/515 (43%), Gaps = 26/515 (5%)

Query: 152 PNTFARNIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDV 207
           PN  + N+V++ LFK G VD    L  ++L +   PN +++N  +  LCK   +   + V
Sbjct: 137 PNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAV 196

Query: 208 IGMMVRKG----------------FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           +  M  KG                  P+V  + +L++ +CK+GR  EA  +   M+  G 
Sbjct: 197 LQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQ 256

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
           +     +  L+ G+     L     L   M+Q+G       +  LI+ + + +    A +
Sbjct: 257 NPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMT 316

Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
               +  +G +P++V +  +ID L K G  +DA+  +  ++   L PD  TF SL+  +C
Sbjct: 317 AFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLC 376

Query: 372 LSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
             G +  + KL   +    +  + +  N ++   CK G   +A   ++ ++  G  PD  
Sbjct: 377 TIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVV 436

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
           S+  L+ G C   K+DE+I +   +V      +   ++A+++   + GR   A+ L+R  
Sbjct: 437 SYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREM 496

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
             +    + ++Y + + GL   GR   A   Y ++    +     TY ++L   C+   +
Sbjct: 497 FSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFV 556

Query: 549 KMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLG 608
               R+ Q +     +L+  T   +   + K      A +    +   GL+PD +   L 
Sbjct: 557 DEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLM 616

Query: 609 LLS--DETMTPVSLFDGFVPCERRAGNANHLLLNG 641
           + S  +E +   S  + F+  E+    AN   LN 
Sbjct: 617 IQSHIEEGLLEES-DELFLSMEKNGCTANSRTLNA 650



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/423 (22%), Positives = 195/423 (46%), Gaps = 7/423 (1%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG 173
           G  ++   F + +R Y + E     + AF EM + GF+PN      V+D+L K GRV+  
Sbjct: 290 GIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDA 349

Query: 174 I----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
           +    +++ E   P+ ++F   +  LC + +   V+ +   M+ +G +PN      +++ 
Sbjct: 350 VSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDS 409

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
            CK GR+ EA+     +I +G    V ++T+LIDG+    ++D +  L  +MV  G  P+
Sbjct: 410 LCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPD 469

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
            VTY++L+ G+ +      A +    + S+   P+ + +N+++  L   G    A + Y 
Sbjct: 470 NVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYM 529

Query: 350 GLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAG 406
            +++  +     T+  +L  +C +       ++  GL   E + ++  +N ++    K G
Sbjct: 530 KIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVG 589

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
               A  L++ +L  G  PD   +  +++       ++E+  ++  +  N    N+    
Sbjct: 590 RIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLN 649

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
           AIV +L+E G   +A     +   ++Y ++  +  + I  + E    +E   L  + +  
Sbjct: 650 AIVRKLLEKGDVRRAGTYLTKIDEKEYSVEASTAVLLISIVSERKYQKEVKFLPEKYQSF 709

Query: 527 AVP 529
             P
Sbjct: 710 MEP 712



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 96/386 (24%), Positives = 167/386 (43%), Gaps = 64/386 (16%)

Query: 223 FEILLNCFCKMGRIAEAYQ--------LLGLMITLGTSLSVN--AWTVLIDGFRRLRRLD 272
           F IL+ CFC +G +  A +         + +M   G +   N  ++ ++I+G  +   +D
Sbjct: 97  FGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDGYNCPPNVLSYNMVINGLFKEGEVD 156

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH----------- 321
            A  L+ +M+  G  PN+VTY S+I G  +A+    A + L  +  +G            
Sbjct: 157 KAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRLLKKM 216

Query: 322 -----APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
                 PD+V +++LID   K+G   +A +++D ++     PD+YT+ +LL      G  
Sbjct: 217 SGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGAL 276

Query: 377 SLLPKLVC-----GLEVE---------------------------------ADLVVYNAL 398
             +  L+      G+ +E                                  ++V Y  +
Sbjct: 277 VDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTV 336

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           +   CKAG    AV  ++ M+ +G +PD  +F  L+ GLC   +  +   +   ++    
Sbjct: 337 IDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGI 396

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
             NA     I+D L + GR  +A   F + I      DVVSYT+ I G    G+ +E+  
Sbjct: 397 HPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIK 456

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCK 544
           L  +M  I + P+  TY  +L  +CK
Sbjct: 457 LLGRMVSIGLRPDNVTYSALLNGYCK 482



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 86/390 (22%), Positives = 165/390 (42%), Gaps = 12/390 (3%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
           A++ FI   +Q+ +  +V ++  +I ++ +  GR E       ++   G      TF   
Sbjct: 314 AMTAFIEM-RQKGFSPNVVTYTTVIDILCK-AGRVEDAVSHFSQMVSEGLSPDIITFTSL 371

Query: 126 LR-IYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKET 180
           +  +   GE   +   +F+ + R G  PN    N +MD L K GRV    D   +++   
Sbjct: 372 IHGLCTIGEWKKVEKLSFEMINR-GIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVG 430

Query: 181 QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAY 240
             P+ +S+ I +   C    +     ++G MV  G  P+   +  LLN +CK GR+ +A 
Sbjct: 431 VKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDAL 490

Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
            L   M +     +   + +++ G     R+  A   + K+V +G    + TY  ++ G 
Sbjct: 491 ALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGL 550

Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
            E      A      L S+    ++   N++I  L K+G   DA  ++  +L   LVPD+
Sbjct: 551 CENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDA 610

Query: 361 YTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
             +  ++ +    G      +L   +E     A+    NA++    + G   +A      
Sbjct: 611 IIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTYLTK 670

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
           + +K ++ +  + V LL  +   RK  + +
Sbjct: 671 IDEKEYSVEASTAV-LLISIVSERKYQKEV 699



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 37/67 (55%)

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
           P +V+SY + I GL + G  ++AY L+ +M     PPN  TY  ++   CK + +   + 
Sbjct: 136 PPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEA 195

Query: 554 LLQDVID 560
           +LQ + D
Sbjct: 196 VLQQMFD 202


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 124/505 (24%), Positives = 222/505 (43%), Gaps = 52/505 (10%)

Query: 55  STLLNCPSDLIALSFFIWCAKQRDYFH---DVQSFDHMISVVTRLTGRFETVRGIVGELA 111
           + LL   + +   S  +  + Q D F    DV + + +I+    L  R      ++ +L 
Sbjct: 154 TKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLR-RLGYAFSVLAKLL 212

Query: 112 RVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD 171
           ++GC     TF   +R        G  L  FD+    GF P+      +M+ L K+G   
Sbjct: 213 KLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTS 272

Query: 172 LGIKVLK----ETQLPNFLSFNI------------------------------------- 190
             I++L+    +   PN +++N                                      
Sbjct: 273 AAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLI 332

Query: 191 -ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
            ALCNLC+   V+ +   +  MV     PNV +F  +++  CK G IA A+ ++ +MI  
Sbjct: 333 HALCNLCEWKHVTTL---LNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKR 389

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           G    V  +T L+DG      +D A  +++ MV  GC PNV +Y  LI G+ + +    A
Sbjct: 390 GVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKA 449

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
              L+ +  +G   D V +N LI  L  +G    A+ ++  ++    +PD  T+  LL  
Sbjct: 450 MGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDY 509

Query: 370 VCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
           +C +   +   +L K + G  ++AD++VYN  +   C+AG    A  L++ +  KG  PD
Sbjct: 510 LCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPD 569

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
             ++  ++ GLC    +DEA  +++ +  N  + +  ++  I+   + +     A QL +
Sbjct: 570 VRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQ 629

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGG 511
             + E +  DV + T+ +  L + G
Sbjct: 630 EMLAEGFSADVSTTTLIVEMLSDDG 654



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 97/388 (25%), Positives = 187/388 (48%), Gaps = 5/388 (1%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+ + F   L ++ K+   S V  +   M   G  P+V    IL+N FC + R+  A+ +
Sbjct: 148 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 207

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           L  ++ LG       +  LI G     ++  A +L++K +  G  P+VVTY +L+ G  +
Sbjct: 208 LAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 267

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
               S A   L  +  +   P+++ +N +ID L K     +A +++  ++   + PD +T
Sbjct: 268 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFT 327

Query: 363 FCSLLSTVCLSGRF----SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           + SL+  +C    +    +LL ++V   ++  ++VV++ ++   CK G    A  + + M
Sbjct: 328 YNSLIHALCNLCEWKHVTTLLNEMV-NSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMM 386

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
           + +G  PD  ++  L+ G C   ++DEA+ V+  +V      N   +  +++   +  R 
Sbjct: 387 IKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRM 446

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            KA+ L  +  ++    D V+Y   I GL   GR + A  L+ +M      P+  TYR++
Sbjct: 447 DKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRIL 506

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELD 566
           L   CK  ++     LL+ +  + ++ D
Sbjct: 507 LDYLCKNHHLAEAMVLLKAIEGSNLDAD 534



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 112/500 (22%), Positives = 217/500 (43%), Gaps = 8/500 (1%)

Query: 85  SFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDE 144
            F  +++ + ++   + TV  +  ++   G      T  + +  +      G       +
Sbjct: 152 DFTKLLTSIAKMK-HYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAK 210

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLND 200
           + + G  P+    N ++  L   G++   +    K + E   P+ +++   +  LCK+ +
Sbjct: 211 LLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGN 270

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
            S    ++  MV+K   PNV  +  +++  CK  ++ EA+ L   MIT G S  +  +  
Sbjct: 271 TSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNS 330

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           LI     L        L  +MV +   PNVV +++++    +  M +IA   +DM+   G
Sbjct: 331 LIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRG 390

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
             PD+V +  L+D        D+A+ V+D ++    VP+  ++  L++  C   R     
Sbjct: 391 VEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAM 450

Query: 381 KLVCGLEVE---ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
            L+  + ++   AD V YN L+   C  G    A+ L++ M+  G  PD  ++  LL  L
Sbjct: 451 GLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYL 510

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
           C    + EA+ + + I  +N   +  V+   +D +  AG    A  LF     +    DV
Sbjct: 511 CKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDV 570

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
            +Y + I GL + G  +EA  L+ +M       +   Y  ++  F +        +LLQ+
Sbjct: 571 RTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQE 630

Query: 558 VIDARIELDYHTSIRLTKFI 577
           ++      D  T+  + + +
Sbjct: 631 MLAEGFSADVSTTTLIVEML 650



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 87/370 (23%), Positives = 152/370 (41%), Gaps = 40/370 (10%)

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           LD A   + +M+     P+ V +T L+    + K +S   S    ++S G  PD+   N+
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 190

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLVCGL 386
           LI+    +     A  V   LL+L   PD+ TF +L+  +C+ G+      L  K + G 
Sbjct: 191 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTI-GE 249

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
             + D+V Y  L++  CK G  + A++L  +M+ K   P+  ++  ++  LC  R++ EA
Sbjct: 250 GFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEA 309

Query: 447 INVYQGIVMN-----------------------------NPAVNAH------VHTAIVDR 471
            N++  ++                               N  VN+       V + +VD 
Sbjct: 310 FNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDA 369

Query: 472 LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
           L + G    A  +    I      DVV+YT  + G       +EA  ++  M H    PN
Sbjct: 370 LCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPN 429

Query: 532 AYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLV 591
             +Y +++  +C+ + +     LL+ +    +  D  T   L   +        A+    
Sbjct: 430 VRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFH 489

Query: 592 EMCNLGLIPD 601
           EM   G IPD
Sbjct: 490 EMVASGQIPD 499



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 111/227 (48%), Gaps = 3/227 (1%)

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYN 396
           + DDAL  ++ +L +   P +  F  LL+++     +S +  L   ++   +  D+   N
Sbjct: 130 TLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLN 189

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            L++ FC       A  +   +L  G  PDN +F  L+RGLC   KI EA++++   +  
Sbjct: 190 ILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGE 249

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
               +   +  +++ L + G    AI+L R  + +    +V++Y   I  L +  +  EA
Sbjct: 250 GFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEA 309

Query: 517 YILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           + L+S+M    + P+ +TY  ++ + C     K V  LL ++++++I
Sbjct: 310 FNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKI 356


>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 665

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 113/503 (22%), Positives = 223/503 (44%), Gaps = 45/503 (8%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR      ++ ++ R  C     T+ + L    +   +G  ++  DEM   G TPN    
Sbjct: 151 GRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTY 210

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N++++ + +  RVD   ++L         P+ +S+   L  LC      +V+ +   MV 
Sbjct: 211 NVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVE 270

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
               PN   F++L+  FC+ G +  A ++L  M   G + +     ++I+   +  R+D 
Sbjct: 271 NNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDD 330

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD--------- 324
           A      M   GCSP+ ++YT+++KG   A  +  A   L+ +  +   P+         
Sbjct: 331 AFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFIC 390

Query: 325 --------------------------LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP 358
                                     +V +N L++     G  D AL++++    L   P
Sbjct: 391 ILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNS---LPCEP 447

Query: 359 DSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLY 415
           ++ T+ +LL+ +C + R     +L+  +   +   ++V +N L+S+FC+ GF  +A++L 
Sbjct: 448 NTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELV 507

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
             M++ G TP+  +F  LL G+      +EA+ +  G+V    +++   +++IVD L   
Sbjct: 508 QQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSRE 567

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
            R  +A+Q+F            V Y   +  L +   T+ A   ++ M   +  PN  TY
Sbjct: 568 DRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTY 627

Query: 536 RVMLLSFCKERNIKMVKRLLQDV 558
            +++    +E  +K  + +L ++
Sbjct: 628 VILIEGLAREGLLKEARYVLSEL 650



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/482 (23%), Positives = 214/482 (44%), Gaps = 13/482 (2%)

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL-----KETQLPNFLSFN 189
           YG +  A   +      P+ +    ++  L   GRV   + +L     +E Q P+ +++ 
Sbjct: 118 YGRLDAARRLIASMPVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQ-PSVVTYT 176

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
           + L  +CK +       V+  M  KG  PN+  + +++N  C+  R+ +A Q+L  + + 
Sbjct: 177 VLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSY 236

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           G      ++T ++ G    +R +    L+ +MV+N C PN VT+  L++ F    M   A
Sbjct: 237 GFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERA 296

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
              LD +   G   +    N++I+ + K G  DDA +  + +      PD+ ++ ++L  
Sbjct: 297 IEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKG 356

Query: 370 VCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
           +C +GR+    +L+  +       + V +N  +   C+ G  +QA+ L   M + G +  
Sbjct: 357 LCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVG 416

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
             ++  L+ G C   ++D A+ ++  +       N   +T ++  L  A R   A +L  
Sbjct: 417 IVTYNALVNGFCVQGRVDSALELFNSLPCEP---NTITYTTLLTGLCHAERLDAAAELLA 473

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
             +    PL+VV++ V +    + G  EEA  L  QM      PN  T+  +L    ++ 
Sbjct: 474 EMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDC 533

Query: 547 NIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE-MWR 605
           N +    LL  ++   I LD  T   +   + +      AV     + ++G+ P   M+ 
Sbjct: 534 NSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYN 593

Query: 606 KL 607
           K+
Sbjct: 594 KI 595



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 105/490 (21%), Positives = 217/490 (44%), Gaps = 46/490 (9%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
           +R+    V ++  ++  V + +G F     ++ E+   GC     T+ + +    R +  
Sbjct: 165 RRECQPSVVTYTVLLEAVCKSSG-FGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRV 223

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIA 191
               +  + +  +GF P+T +   V+  L    R +    L  ++++   +PN ++F++ 
Sbjct: 224 DDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDML 283

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           +   C+   V    +V+  M   G   N  +  I++N  CK GR+ +A++ L  M + G 
Sbjct: 284 VRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGC 343

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
           S    ++T ++ G  R  R + A  L  +MV+  C PN VT+ + I    +  +   A  
Sbjct: 344 SPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAIL 403

Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
            ++ +   G +  +V +N L++     G  D AL++++ L      P++ T+ +LL+ +C
Sbjct: 404 LIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSL---PCEPNTITYTTLLTGLC 460

Query: 372 LSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
            + R     +L+  +   +   ++V +N L+S+FC+ GF  +A++L   M++ G TP+  
Sbjct: 461 HAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLI 520

Query: 429 SFVGLLRGL---CGAR--------------------------------KIDEAINVYQGI 453
           +F  LL G+   C +                                 +I+EA+ ++  +
Sbjct: 521 TFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAV 580

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
                   A ++  I+  L +     +AI  F   +      +  +Y + I GL   G  
Sbjct: 581 QDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLL 640

Query: 514 EEAYILYSQM 523
           +EA  + S++
Sbjct: 641 KEARYVLSEL 650



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 104/460 (22%), Positives = 191/460 (41%), Gaps = 13/460 (2%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ---LP-NFLSFNIALCNLCKLNDVSNV 204
           G  P+ +    ++  L + GR     +VL+  +    P +  ++N  +   C+   +   
Sbjct: 65  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAA 124

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
           + +I  M      P+   +  L+   C  GR+ +A  LL  M+      SV  +TVL++ 
Sbjct: 125 RRLIASM---PVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEA 181

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
             +      A  + ++M   GC+PN+VTY  +I G         A   L+ L S G  PD
Sbjct: 182 VCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPD 241

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVC 384
            V +  ++  L     ++D   ++  ++E   VP+  TF  L+   C  G      +++ 
Sbjct: 242 TVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLD 301

Query: 385 GLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
            +      A+  + N +++  CK G  + A +  N M   G +PD  S+  +L+GLC A 
Sbjct: 302 RMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAG 361

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYT 501
           + ++A  +   +V  N   N       +  L + G   +AI L  +       + +V+Y 
Sbjct: 362 RWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYN 421

Query: 502 VAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
             + G    GR + A  L++ +      PN  TY  +L   C    +     LL +++  
Sbjct: 422 ALVNGFCVQGRVDSALELFNSLP---CEPNTITYTTLLTGLCHAERLDAAAELLAEMMQN 478

Query: 562 RIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
              L+  T   L  F  +      A+  + +M   G  P+
Sbjct: 479 DCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPN 518



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 80/304 (26%), Positives = 133/304 (43%), Gaps = 53/304 (17%)

Query: 267 RLRRL----DMA--GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           RLRRL    D+A    L E+    G +P+V   T LI+        S A   L   E  G
Sbjct: 41  RLRRLIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSG 100

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----F 376
              D+  +N L+    + G  D A  +   +  + + PD+YT+  L+  +C  GR     
Sbjct: 101 APVDVFAYNTLVAGYCRYGRLDAARRL---IASMPVPPDAYTYTPLIRGLCDRGRVGDAL 157

Query: 377 SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
           SLL  ++   E +  +V Y  LL   CK+    QA+K+ + M  KG TP+  ++  ++ G
Sbjct: 158 SLLDDML-RRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIING 216

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
           +C   ++D+A                     I++RL   G                +  D
Sbjct: 217 MCREDRVDDA-------------------RQILNRLSSYG----------------FQPD 241

Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK----ERNIKMVK 552
            VSYT  ++GL    R E+  +L+ +M      PN  T+ +++  FC+    ER I+++ 
Sbjct: 242 TVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLD 301

Query: 553 RLLQ 556
           R+ +
Sbjct: 302 RMSE 305



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 65/321 (20%), Positives = 126/321 (39%), Gaps = 42/321 (13%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D  S+  ++  + R  GR+E  + ++ E+ R  C     TF  F+ I  +  +    +  
Sbjct: 346 DTISYTTVLKGLCR-AGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILL 404

Query: 142 FDEMGRFGFT--------------------------------PNTFARNIVMDVLFKIGR 169
            ++M  +G +                                PNT     ++  L    R
Sbjct: 405 IEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLPCEPNTITYTTLLTGLCHAER 464

Query: 170 VDLGIKVLKE---TQLP-NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEI 225
           +D   ++L E      P N ++FN+ +   C+   V    +++  M+  G  PN+  F  
Sbjct: 465 LDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNT 524

Query: 226 LLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
           LL+   +     EA +LL  +++ G SL    ++ ++D   R  R++ A  ++  +   G
Sbjct: 525 LLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMG 584

Query: 286 CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL 345
             P  V Y  ++    +      A  F   + S    P+   + +LI+ L++ G   +A 
Sbjct: 585 MRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEAR 644

Query: 346 DVYD-----GLLELKLVPDSY 361
            V       G+L   L+ D +
Sbjct: 645 YVLSELCSRGVLSKSLIEDRH 665


>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 873

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 120/474 (25%), Positives = 208/474 (43%), Gaps = 9/474 (1%)

Query: 104 RGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDV 163
           R +  +  ++G      TF + +  Y         L   ++MG +G  P+    N V+  
Sbjct: 196 REVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTA 255

Query: 164 LFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN 219
           L K  ++    DL +++      PN  ++NI +   CKL  +    +VI +M  KG  P+
Sbjct: 256 LCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPD 315

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
           V  +  ++   C  G+I EA +L   M +      V  +  LIDG    R  D A  L E
Sbjct: 316 VWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVE 375

Query: 280 KMVQNGCSPNVVTYTSLIKGF-MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
           +M   G   N VT+  +IK F  E K+   +   + M+ES G +PD   +N +I+   K 
Sbjct: 376 EMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVES-GFSPDCFTYNTMINGYCKA 434

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVY 395
           G   +A  + D +    L  D++T  +LL T+CL  +      L           D V Y
Sbjct: 435 GKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTY 494

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
             L+  + K    ++A+KL+  M + G      ++  ++RGLC + K D+A++    ++ 
Sbjct: 495 GTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLE 554

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
                +      I+      G   KA Q   + +      D+ +  + +RGL   G  E+
Sbjct: 555 KGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEK 614

Query: 516 AYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
              L++       P +  TY +++ SFCKER ++    L+ ++    +E D +T
Sbjct: 615 GLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYT 668



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/400 (24%), Positives = 184/400 (46%), Gaps = 18/400 (4%)

Query: 183 PNFLSFNIALCNLCKLNDVSNV---KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEA 239
           PN L+ N  L  L + N   ++   ++V    V+ G  PNV  F IL++ +C      EA
Sbjct: 171 PNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEA 230

Query: 240 YQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG 299
            +L+  M   G       +  ++    +  +L     L  +M  +G  PN  TY  L+ G
Sbjct: 231 LRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHG 290

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
           + + K    A   ++++  +G  PD+  +N ++  L   G  D+A+ + D +   KLVPD
Sbjct: 291 YCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPD 350

Query: 360 SYTFCSLLSTVCLSGRFSLLP-KLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLY 415
             T+ +L+   C   R S    KLV  ++   V+ + V +N ++ +FC  G  ++A  + 
Sbjct: 351 VVTYNTLIDG-CFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVM 409

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY-----QGIVMNNPAVNAHVHTAIVD 470
             M++ GF+PD +++  ++ G C A K+ EA  +      +G+ ++   +N  +HT  ++
Sbjct: 410 VKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLE 469

Query: 471 RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
           + ++      A  L  +A    Y LD V+Y   I G  +  + + A  L+ +MK   +  
Sbjct: 470 KQLD-----DAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVA 524

Query: 531 NAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
              TY  ++   C           L ++++  +  D  TS
Sbjct: 525 TIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTS 564



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 104/426 (24%), Positives = 180/426 (42%), Gaps = 65/426 (15%)

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKL 198
           D+M  F   P+    N ++D  F+    D   K+++E +      N ++ NI +   C  
Sbjct: 340 DKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTE 399

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM---------ITL 249
             +    +V+  MV  GF P+   +  ++N +CK G++AEAY+++  M          TL
Sbjct: 400 GKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTL 459

Query: 250 GTSLSV--------NAWTV------------------LIDGFRRLRRLDMAGYLWEKMVQ 283
            T L          +A+T+                  LI G+ +  + D A  LWE+M +
Sbjct: 460 NTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKE 519

Query: 284 NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
            G    ++TY ++I+G   +     A   L+ L  +G  PD    N++I      G+ + 
Sbjct: 520 TGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEK 579

Query: 344 ALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV---------EADLVV 394
           A   ++ ++E  L PD +T   LL  +C  G   +L K   GL +           D V 
Sbjct: 580 AFQFHNKMVEHSLKPDIFTCNILLRGLCREG---MLEK---GLTLFNTWISKGKPMDTVT 633

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           YN ++S FCK      A  L   M  K   PD Y++  ++ GL  A + +EA  +     
Sbjct: 634 YNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFA 693

Query: 455 MNNPAVNAH-----------VHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
                V              +++  +  L   G+   A++LF++A  +   L+  +Y   
Sbjct: 694 EKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKL 753

Query: 504 IRGLLE 509
           + GLL+
Sbjct: 754 MDGLLK 759



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 71/363 (19%), Positives = 144/363 (39%), Gaps = 18/363 (4%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G+ +    ++ ++   G      T+   +  Y +        +  DEMGR G   +TF  
Sbjct: 400 GKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTL 459

Query: 158 NIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N ++  +    ++D    L +K  K   + + +++   +    K         +   M  
Sbjct: 460 NTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKE 519

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G    +  +  ++   C  G+  +A   L  ++  G     +   ++I G+     ++ 
Sbjct: 520 TGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEK 579

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A     KMV++   P++ T   L++G     M     +  +   S+G   D V +N++I 
Sbjct: 580 AFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIIS 639

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL------- 386
              K    +DA D+   +    L PD YT+ ++++ +  +GR     KL           
Sbjct: 640 SFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQV 699

Query: 387 -------EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
                  E+    ++Y+  +S  C  G    A+KL+     KG + + Y+++ L+ GL  
Sbjct: 700 KTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLK 759

Query: 440 ARK 442
            RK
Sbjct: 760 RRK 762



 Score = 45.4 bits (106), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 47/239 (19%), Positives = 95/239 (39%), Gaps = 17/239 (7%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIY-WRGEMYGMVLEAFDEMGRFGFTPNT 154
           L+G+ +     + EL   G V    T  + +  Y W G +     +  ++M      P+ 
Sbjct: 538 LSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEK-AFQFHNKMVEHSLKPDI 596

Query: 155 FARNIVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGM 210
           F  NI++  L + G ++ G+ +    + + +  + +++NI + + CK   + +  D++  
Sbjct: 597 FTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTE 656

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN-----------AWT 259
           M  K   P+   +  ++    K GR  EA +L       G  +               ++
Sbjct: 657 MEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYS 716

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
             I       +   A  L+++  Q G S N  TY  L+ G ++ +      S L  + S
Sbjct: 717 EQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLKRRKSFTTTSLLPFMVS 775


>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
          Length = 987

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 122/478 (25%), Positives = 210/478 (43%), Gaps = 40/478 (8%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVD--LGIKVLKETQ--LPNFLSFNIALCNLCK 197
            DEM   G  P+ +  N ++D   K GR+   LGIK L E     P+  ++N  +  LC 
Sbjct: 307 LDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG 366

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              +   ++++   + +GF P V  F  L+N +CK  RI +A ++   MI+    L + A
Sbjct: 367 -GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQA 425

Query: 258 WTVLI-----------------------------------DGFRRLRRLDMAGYLWEKMV 282
           + VLI                                   DG+ ++  +  A  +++ M 
Sbjct: 426 YGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLME 485

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
             GC PN  TY SLI G ++ K    A + +  ++ +G  P ++ +  LI    K   +D
Sbjct: 486 HEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFD 545

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYF 402
           +A  +++ + +  L PD   +  L   +C SGR       +    V    V Y +L+  F
Sbjct: 546 NAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGF 605

Query: 403 CKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNA 462
            KAG  + A  L   M+++G   D Y++  LL+ LC  +K++EA+++   + ++    N 
Sbjct: 606 SKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNI 665

Query: 463 HVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQ 522
             +T I+  +I+ G+   A  LF   I   +     +YTV I    + G+ EEA  L  +
Sbjct: 666 VAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGE 725

Query: 523 MKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKF 580
           M+   V P+  TY + +        +      L+ ++DA  E +  T   L K   K 
Sbjct: 726 MERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKM 783



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 114/487 (23%), Positives = 215/487 (44%), Gaps = 35/487 (7%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D+Q++  +I+V+ +   R +  +  + E+   G       +   +  Y +  M G  LE 
Sbjct: 422 DLQAYGVLINVLIK-KCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEV 480

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           F  M   G  PN +    ++  L +  ++   + ++ + Q     P  +++   +   CK
Sbjct: 481 FKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCK 540

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            ++  N   +  MM + G  P+ + + +L +  CK GR  EAY  L   +  G  L+   
Sbjct: 541 KHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---VRKGVVLTKVT 597

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T L+DGF +    D A  L EKMV  GC  ++ TY+ L++   + K  + A S LD + 
Sbjct: 598 YTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMT 657

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G   ++V + ++I  + K G +D A  +++ ++     P + T+   +S+ C  G+  
Sbjct: 658 VSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIE 717

Query: 378 LLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
               L+  +E   V  D+V Y+  ++     G+ ++A      M+D    P+ +++  LL
Sbjct: 718 EAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLL 777

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAH-VHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           +                   +    +NAH + T+ +   IE    +   QL  R +    
Sbjct: 778 KHF-----------------LKMSLINAHYIDTSGMWNWIEL---NTVWQLLERMMKHGL 817

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
              VV+Y+  I G  +  R EEA +L   M   A+ PN   Y +++   C   +IK+  +
Sbjct: 818 NPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCC---DIKLFGK 874

Query: 554 LLQDVID 560
            +  V D
Sbjct: 875 DVSFVTD 881



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 105/418 (25%), Positives = 189/418 (45%), Gaps = 4/418 (0%)

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           +N+AL +L + +    +  +   +V++G  P+   +  ++  +CK G +A A++   L+ 
Sbjct: 147 YNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLR 206

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
             G  +       L+ G+ R   L  A +L   M   GC  N  +YT LI+G  EA+   
Sbjct: 207 ESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVR 266

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A   + M+  +G + +L  + +LI  L K G   DA  + D +    +VP  +T+ +++
Sbjct: 267 EALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMI 326

Query: 368 STVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
              C SGR      +   +E      D   YN+L+   C  G  ++A +L N  + +GFT
Sbjct: 327 DGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFT 385

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           P   +F  L+ G C A +ID+A+ V   ++ +N  ++   +  +++ LI+  R  +A + 
Sbjct: 386 PTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKET 445

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
                      +VV YT  I G  + G    A  ++  M+H    PNA+TY  ++    +
Sbjct: 446 LNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQ 505

Query: 545 ERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
           ++ +     L+  + +  I         L +   K H   +A      M   GL PDE
Sbjct: 506 DKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDE 563



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 122/533 (22%), Positives = 233/533 (43%), Gaps = 36/533 (6%)

Query: 45  PIILAPHIVHSTLLNCP----SDLIALSFFIWCAKQRDYFHDVQS--------------- 85
           P + A H+  + L   P        AL+FF W A++  + H   S               
Sbjct: 46  PSVTAAHV--ADLFRAPVSPLDPATALAFFEWVARRPGFRHTAASHAALLQLLARRRAPA 103

Query: 86  -FDHMISVVTRLTGRFETVRGIVGELA---RVG---CVIKAQTFLLFLRIYWRGEMYGMV 138
            +D ++  +   +G  E VR  V  +    RVG    V+  + + L LR   R +M   +
Sbjct: 104 NYDKLVLSMISCSGTAEDVREAVDAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYM 163

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIK---VLKETQLP-NFLSFNIALCN 194
            + +  + + G  P+T   N ++    K G + +  +   +L+E+ +  +  + N  L  
Sbjct: 164 GKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLG 223

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
            C+ +D+     ++ MM   G   N   + IL+    +   + EA  L+ +M+  G SL+
Sbjct: 224 YCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLN 283

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           ++ +T+LI G  +  R+  A  L ++M   G  P+V TY ++I G+ ++     A     
Sbjct: 284 LHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKA 343

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
           ++E  G  PD   +N LI  L   G  D+A ++ +G +     P   TF +L++  C + 
Sbjct: 344 LMEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAE 402

Query: 375 RFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
           R     ++   +     + DL  Y  L++   K     +A +  N M   G  P+   + 
Sbjct: 403 RIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYT 462

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            ++ G C    +  A+ V++ +       NA  + +++  LI+  + HKA+ L  +   +
Sbjct: 463 SIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQED 522

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
                V++YT  I+G  +    + A+ L+  M+   + P+   Y V+  + CK
Sbjct: 523 GITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCK 575



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 130/591 (21%), Positives = 227/591 (38%), Gaps = 81/591 (13%)

Query: 77  RDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYG 136
           R     V +++ MI    + +GR +   GI   + + GC     T+           +YG
Sbjct: 313 RGVVPSVWTYNAMIDGYCK-SGRMKDALGIKALMEQNGCNPDDWTY--------NSLIYG 363

Query: 137 MVLEAFDEMGRF-------GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPN----F 185
           +     DE           GFTP       +++   K  R+D  ++V       N     
Sbjct: 364 LCGGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDL 423

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGL 245
            ++ + +  L K   +   K+ +  M   G  PNV ++  +++ +CK+G +  A ++  L
Sbjct: 424 QAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKL 483

Query: 246 MITLGTSLSVNAWTV--LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
           M   G     NAWT   LI G  + ++L  A  L  KM ++G +P V+ YT+LI+G  + 
Sbjct: 484 MEHEGCH--PNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKK 541

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
             F  AF   +M+E  G  PD   +NVL D L K G  ++A   Y  L+   +V    T+
Sbjct: 542 HEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEA---YSFLVRKGVVLTKVTY 598

Query: 364 CSLLSTVCLSGRFSLLPKLVCGLEVE---ADLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
            SL+     +G       L+  +  E   ADL  Y+ LL   CK    N+A+ + + M  
Sbjct: 599 TSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTV 658

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
            G   +  ++  ++  +    K D A +++  ++ +    +A  +T  +    + G+  +
Sbjct: 659 SGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEE 718

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML- 539
           A  L      +    DVV+Y + I G    G  + A+    +M   +  PN +TY ++L 
Sbjct: 719 AEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLK 778

Query: 540 --------------------------------------------------LSFCKERNIK 549
                                                               FCK   ++
Sbjct: 779 HFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLE 838

Query: 550 MVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
               LL  ++   I  +      L K           V+ + +M   G  P
Sbjct: 839 EACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQP 889



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 88/436 (20%), Positives = 179/436 (41%), Gaps = 30/436 (6%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D Q+++ +   + + +GR E        L R G V+   T+   +  + +          
Sbjct: 562 DEQAYNVLTDALCK-SGRAEEAYSF---LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVL 617

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP----NFLSFNIALCNLCK 197
            ++M   G   + +  ++++  L K  +++  + +L +  +     N +++ I +  + K
Sbjct: 618 IEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIK 677

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
                + K +   M+  G  P+   + + ++ +CK+G+I EA  L+G M   G +  V  
Sbjct: 678 EGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVT 737

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           + + I+G   +  +D A    ++MV   C PN  TY  L+K F+  KM  I   ++D   
Sbjct: 738 YHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFL--KMSLINAHYIDT-- 793

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
                 + +  N +   L +M             ++  L P   T+ S+++  C + R  
Sbjct: 794 --SGMWNWIELNTVWQLLERM-------------MKHGLNPTVVTYSSIIAGFCKATRLE 838

Query: 378 ---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
              +L   + G  +  +  +Y  L+   C      + V     M++ GF P   S+  L+
Sbjct: 839 EACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLI 898

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            GLC     D A +++  ++  +   N      + D L++AG      QL          
Sbjct: 899 VGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCR 958

Query: 495 LDVVSYTVAIRGLLEG 510
           +D  SY++    + E 
Sbjct: 959 IDSESYSMLTDSIREA 974



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 47/89 (52%)

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
           AIQ  RR   ++  L    Y +A+R LL    TE    LYS +    + P+  TY  M++
Sbjct: 128 AIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIM 187

Query: 541 SFCKERNIKMVKRLLQDVIDARIELDYHT 569
           ++CK+ ++ +  R    + ++ +++D +T
Sbjct: 188 AYCKKGSLAIAHRYFCLLRESGMQMDTYT 216


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 132/545 (24%), Positives = 245/545 (44%), Gaps = 20/545 (3%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           + R    DV ++   I    +    +  +R ++  +  +GC   A  +   +   +    
Sbjct: 138 RDRGVQSDVYTYTIRIKSFCKTARPYAALR-LLRNMPELGCDSNAVAYCTVVAGLYDSGE 196

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNI 190
           +    E FDEM      P+  A N ++ VL K G V     L  KVLK    PN  +FNI
Sbjct: 197 HDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNI 256

Query: 191 ALCNLCKL---------NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
            +  LC+          + V   ++ +  MV  GF P+   +  +++ +CK G + +A +
Sbjct: 257 FVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANR 316

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           +L   +  G       +  LI+GF +    D A  +++  +  G  P++V Y +LIKG  
Sbjct: 317 VLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLS 376

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           +  +   A   ++ +   G  P++  +N++I+ L KMG   DA  + D  +     PD +
Sbjct: 377 QQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIF 436

Query: 362 TFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           T+ +L+   C   +     ++V  +  +    D++ YN LL+  CKAG   + ++++  M
Sbjct: 437 TYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAM 496

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
            +KG TP+  ++  ++  LC A+K++EA+++   +       +      +     + G  
Sbjct: 497 EEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDI 556

Query: 479 HKAIQLFRRAIVEKYPL--DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
             A QLFRR + ++Y +     +Y + +    E      A  L+S MK+    P+ YTYR
Sbjct: 557 DGAYQLFRR-MEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYR 615

Query: 537 VMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNL 596
           V++  FCK  NI    + L + ++ R      T  R+   +        AV  +  M   
Sbjct: 616 VVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQK 675

Query: 597 GLIPD 601
           G++P+
Sbjct: 676 GIVPE 680



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 108/551 (19%), Positives = 211/551 (38%), Gaps = 80/551 (14%)

Query: 64  LIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGEL-ARVGCVIKAQTF 122
           L AL  F     +  + H   ++  ++  +    G FE +  ++ E+   V   +    +
Sbjct: 21  LKALEMFNSAKSEDGFKHTASTYKCIVQKLGH-HGEFEEMEKLLSEMRENVNNALLEGAY 79

Query: 123 LLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL 182
           +  ++ Y R       ++ F+ M  +   P+  + N +M++L + G  +   KV      
Sbjct: 80  IEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMR--- 136

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
                                       M  +G   +V  + I +  FCK  R   A +L
Sbjct: 137 ----------------------------MRDRGVQSDVYTYTIRIKSFCKTARPYAALRL 168

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM--------------------- 281
           L  M  LG   +  A+  ++ G       D A  L+++M                     
Sbjct: 169 LRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCK 228

Query: 282 --------------VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE-------- 319
                         ++ G  PN+ T+   ++G         A     ++E+E        
Sbjct: 229 KGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVN 288

Query: 320 -GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG---R 375
            G  PD + +N +ID   K G   DA  V    +     PD +T+CSL++  C  G   R
Sbjct: 289 GGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDR 348

Query: 376 FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
              + K   G  +   +V+YN L+    + G    A++L N M + G  P+ +++  ++ 
Sbjct: 349 AMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVIN 408

Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
           GLC    + +A ++    +      +   +  ++D   +  +   A ++  R   +    
Sbjct: 409 GLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTP 468

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
           DV++Y   + GL + G++EE   ++  M+     PN  TY +++ S CK + +     LL
Sbjct: 469 DVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLL 528

Query: 556 QDVIDARIELD 566
            ++    ++ D
Sbjct: 529 GEMKSKGLKPD 539



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 114/252 (45%), Gaps = 5/252 (1%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG 173
           GC     T+   +  Y +        E  + M   G TP+    N +++ L K G+ +  
Sbjct: 430 GCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEV 489

Query: 174 IKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
           +++ K  +     PN +++NI + +LCK   V+   D++G M  KG  P+V  F  L   
Sbjct: 490 MEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTG 549

Query: 230 FCKMGRIAEAYQLLGLM-ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSP 288
           FCK+G I  AYQL   M        +   + +++  F     ++MA  L+  M  +GC P
Sbjct: 550 FCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDP 609

Query: 289 NVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVY 348
           +  TY  +I GF +    +  + FL     +   P L     +++CL       +A+ + 
Sbjct: 610 DNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGII 669

Query: 349 DGLLELKLVPDS 360
             +L+  +VP++
Sbjct: 670 HLMLQKGIVPET 681



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 83/389 (21%), Positives = 156/389 (40%), Gaps = 22/389 (5%)

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
           + + G++ EA      M       SV++   +++        + A  ++ +M   G   +
Sbjct: 86  YGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSD 145

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
           V TYT  IK F +      A   L  +   G   + V +  ++  L   G +D A +++D
Sbjct: 146 VYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFD 205

Query: 350 GLLELKLVPDSYTFCSLLSTVCLSGRF--------SLLPKLVCGLEVEADLVVYNALLSY 401
            +L   L PD   F  L+  +C  G           +L + VC      +L  +N  +  
Sbjct: 206 EMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVC-----PNLFTFNIFVQG 260

Query: 402 FCKAGFPNQAVK---------LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
            C+ G  ++AV+             M++ GF PD+ ++  ++ G C    + +A  V + 
Sbjct: 261 LCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKD 320

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
            V      +   + ++++   + G   +A+ +F+  + +     +V Y   I+GL + G 
Sbjct: 321 AVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGL 380

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
              A  L ++M      PN +TY +++   CK   +     L+ D I      D  T   
Sbjct: 381 ILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNT 440

Query: 573 LTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           L     K     SA   +  M + G+ PD
Sbjct: 441 LIDGYCKQLKLDSATEMVNRMWSQGMTPD 469



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/217 (23%), Positives = 94/217 (43%), Gaps = 9/217 (4%)

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           +NA+++   + G+ NQA K+Y  M D+G   D Y++   ++  C   +   A+ + + + 
Sbjct: 114 HNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMP 173

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
                 NA  +  +V  L ++G    A +LF   +      DVV++   +  L + G   
Sbjct: 174 ELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVF 233

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKE-------RNIKMV--KRLLQDVIDARIEL 565
           E+  L  ++    V PN +T+ + +   C+E       RN ++V  +  L+ +++   E 
Sbjct: 234 ESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEP 293

Query: 566 DYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
           D  T   +     K      A   L +    G  PDE
Sbjct: 294 DDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDE 330


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 115/490 (23%), Positives = 219/490 (44%), Gaps = 55/490 (11%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           + + E  R ++G +  +GCV     +   +  Y + + +G   +   EM +    P    
Sbjct: 55  SNQLEKARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVT 114

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
              ++D L K  R    +K+L E +     PN  ++N+ +  LC+   +   K ++  M 
Sbjct: 115 YTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMA 174

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
            +G++P+V  +   +   CK  R+ EA + L  M     +  V ++T +I+G  +   LD
Sbjct: 175 VRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLD 231

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A  + + M   GC+P+VVTY+SLI GF +      A   LD +   G  P++V +N L+
Sbjct: 232 SASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLL 291

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-------FSLLPKLVCG 385
             L ++G    A D+   +      PD  ++ + +  +C + R       F  + +  C 
Sbjct: 292 GALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCT 351

Query: 386 LEVEA------DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF-TPDNYSFVGLLRGLC 438
               +      D+++Y  LL   CK G  ++A  L++ +LD+    PD + +  +L   C
Sbjct: 352 PNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHC 411

Query: 439 GARKIDEAINVYQ------------------GIVMNNPAVNAHV---------------- 464
             R+ID+A+ +++                  G+ +++   +A                  
Sbjct: 412 KRRQIDKALQIHKQMLEKNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVT 471

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
           +  +VD + + G+   A++LF  A+      DVV+Y+  I GL+     EEAY+L++++ 
Sbjct: 472 YGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLV 531

Query: 525 HIAVPPNAYT 534
                P+  T
Sbjct: 532 ERRWVPDDKT 541



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 122/472 (25%), Positives = 218/472 (46%), Gaps = 22/472 (4%)

Query: 148 FGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE----TQLPNFLSFNIALCNLCKLNDVSN 203
            G+  N F  N ++  L +  R D    V +E    +  P+  +F I L  LC+ N +  
Sbjct: 1   MGYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEK 60

Query: 204 VKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLID 263
            + ++G M   G  P+  ++  L++ + K     +A++ L  M+      +V  +T ++D
Sbjct: 61  ARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD 120

Query: 264 GFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP 323
           G  +  R   A  L ++M   GCSPN+ TY  +++G  E +    A   L+ +   G+ P
Sbjct: 121 GLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFP 180

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV 383
           D+V +N  I  L K    D+A      L  + + PD  ++ ++++ +C SG      +++
Sbjct: 181 DVVTYNSFIKGLCKCDRVDEARKF---LARMPVTPDVVSYTTVINGLCKSGDLDSASRML 237

Query: 384 CGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
             +       D+V Y++L+  FCK G   +A+ L ++ML  G  P+  ++  LL  L   
Sbjct: 238 DHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRL 297

Query: 441 RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI-------VEKY 493
             I +A ++   +       +   + A +D L +A R  KA  +F R +          Y
Sbjct: 298 GHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSY 357

Query: 494 PL---DVVSYTVAIRGLLEGGRTEEAYILYSQ-MKHIAVPPNAYTYRVMLLSFCKERNIK 549
            +   D++ YTV + GL +GGR +EA  L+S+ +      P+ + Y VML S CK R I 
Sbjct: 358 SMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQID 417

Query: 550 MVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
              ++ + +++     +  T   L   +      S A   L+ M + G IPD
Sbjct: 418 KALQIHKQMLEKNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPD 468



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 117/472 (24%), Positives = 202/472 (42%), Gaps = 39/472 (8%)

Query: 184 NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
           N  ++N  L  L + +       V   M+ K   P+   F ILL   C+  ++ +A +LL
Sbjct: 6   NVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLL 65

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
           G M  +G       +  LI G+ + +    A     +MV+N C P VVTYT+++ G  +A
Sbjct: 66  GRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKA 125

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
           +    A   LD +  +G +P++  +NV+++ L +    D+A  + + +      PD  T+
Sbjct: 126 ERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTY 185

Query: 364 CSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
            S +  +C   R     K +  + V  D+V Y  +++  CK+G  + A ++ + M ++G 
Sbjct: 186 NSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGC 245

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
           TPD  ++  L+ G C   +++ A+ +   ++      N   + +++  L   G   KA  
Sbjct: 246 TPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAED 305

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR------- 536
           +        +  DVVSY   I GL +  R ++A  ++ +M      PNA +Y        
Sbjct: 306 MLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDIL 365

Query: 537 ---VMLLSFCKERNIKMVKRLLQDVIDARI----------ELDYHTSIRLTKFIFKFHSS 583
              V+L   CK         L   V+D +I           LD H   R      + H  
Sbjct: 366 LYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQ 425

Query: 584 SSAVNQLVEMCNL--------GLIPDEMWRKLGLLSD-ETMTPVSLFDGFVP 626
               N     CN+        GL  D+       LSD ETM    + +GF+P
Sbjct: 426 MLEKN----CCNVVTWNILVHGLCVDDR------LSDAETMLLTMVDEGFIP 467



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 128/557 (22%), Positives = 237/557 (42%), Gaps = 30/557 (5%)

Query: 79  YFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMV 138
           Y H+V +++ ++  +TR   R +    +  E+    C   A TF + LR   R       
Sbjct: 3   YEHNVFTYNKLLLQLTR-EHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCN 194
            +    M   G  P+    N ++    K        K L E      LP  +++   +  
Sbjct: 62  RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           LCK     +   ++  M  KG  PN+  + +++   C+  ++ EA ++L  M   G    
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPD 181

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           V  +   I G  +  R+D A     +M     +P+VV+YT++I G  ++     A   LD
Sbjct: 182 VVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLD 238

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            + + G  PD+V ++ LID   K G  + A+ + D +L+L   P+   + SLL  +   G
Sbjct: 239 HMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLG 298

Query: 375 RFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF- 430
                  ++  +E      D+V YNA +   CKA    +A  +++ M+++G TP+  S+ 
Sbjct: 299 HIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYS 358

Query: 431 ---------VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV--HTAIVDRLIEAGRCH 479
                      LL GLC   + DEA  ++   V++       V  +  ++D   +  +  
Sbjct: 359 MLIVDILLYTVLLDGLCKGGRFDEACALFSK-VLDEKICEPDVFFYNVMLDSHCKRRQID 417

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
           KA+Q+ ++ ++EK   +VV++ + + GL    R  +A  +   M      P+  TY  ++
Sbjct: 418 KALQIHKQ-MLEKNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLV 476

Query: 540 LSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLI 599
            + CK         L ++ +      D  T   L   +   + +  A     ++     +
Sbjct: 477 DAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWV 536

Query: 600 PDE-----MWRKLGLLS 611
           PD+     + RKL LL+
Sbjct: 537 PDDKTLGLLHRKLKLLN 553


>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/443 (23%), Positives = 210/443 (47%), Gaps = 9/443 (2%)

Query: 126 LRIYWRGEMYGMVLEAF---DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV---LKE 179
           L+I+ R    G  +E+    + M R G+ P+      ++   F +  +   ++V   L++
Sbjct: 93  LKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEK 152

Query: 180 TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEA 239
              P+  ++N  +   CK+N + +   V+  M  K F P+   + I++   C  G++  A
Sbjct: 153 FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 212

Query: 240 YQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG 299
            ++L  +++     +V  +T+LI+       +D A  L ++M+  G  P++ TY ++I+G
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
             +  M   AF  +  LE +G  PD++ +N+L+  L   G +++   +   +   K  P+
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332

Query: 360 SYTFCSLLSTVCLSGRFSL---LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYN 416
             T+  L++T+C  G+      L KL+    +  D   Y+ L++ FC+ G  + A++   
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 392

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
           TM+  G  PD  ++  +L  LC   K D+A+ ++  +     + N+  +  +   L  +G
Sbjct: 393 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
              +A+ +    +      D ++Y   I  L   G  +EA+ L   M+     P+  TY 
Sbjct: 453 DKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYN 512

Query: 537 VMLLSFCKERNIKMVKRLLQDVI 559
           ++LL FCK   I+    +L+ ++
Sbjct: 513 IVLLGFCKAHRIEDAINVLESMV 535



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 102/420 (24%), Positives = 189/420 (45%), Gaps = 49/420 (11%)

Query: 75  KQRDYFHDVQSFDHMI-SVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGE 133
           + +D+  D  +++ MI S+ +R  G+ +    ++ +L    C     T+ + +       
Sbjct: 185 RSKDFSPDTVTYNIMIGSLCSR--GKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEG 242

Query: 134 MYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFN 189
                L+  DEM   G  P+ F  N ++  + K G VD   ++++  +L    P+ +S+N
Sbjct: 243 GVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYN 302

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
           I L  L         + ++  M  +   PNV  + IL+   C+ G+I EA  LL L    
Sbjct: 303 ILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKL---- 358

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
                                          M + G +P+  +Y  LI  F       +A
Sbjct: 359 -------------------------------MKEKGLTPDAYSYDPLIAAFCREGRLDVA 387

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
             FL+ + S+G  PD+V +N ++  L K G  D AL+++  L E+   P+S ++ ++ S 
Sbjct: 388 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSA 447

Query: 370 VCLSGR-----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
           +  SG        +L  +  G  ++ D + YN+++S  C+ G  ++A +L   M    F 
Sbjct: 448 LWSSGDKIRALHMILEMMSNG--IDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFH 505

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           P   ++  +L G C A +I++AINV + +V N    N   +T +++ +  AG   +A++L
Sbjct: 506 PSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/366 (25%), Positives = 171/366 (46%), Gaps = 39/366 (10%)

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
           +L E MV+ G +P+V+  T LIKGF   +    A   +++LE  G  PD+  +N LI+  
Sbjct: 110 HLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ-PDVFAYNALINGF 168

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADL 392
            KM   DDA  V D +      PD+ T+  ++ ++C  G+  L  K++  L     +  +
Sbjct: 169 CKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTV 228

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           + Y  L+      G  ++A+KL + ML +G  PD +++  ++RG+C    +D A  + + 
Sbjct: 229 ITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRN 288

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           + +     +   +  ++  L+  G+  +  +L  +   EK   +VV+Y++ I  L   G+
Sbjct: 289 LELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGK 348

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI------------- 559
            EEA  L   MK   + P+AY+Y  ++ +FC+E  + +    L+ +I             
Sbjct: 349 IEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNT 408

Query: 560 -----------DARIEL---------DYHTSIRLTKFIFKFHSSSS--AVNQLVEMCNLG 597
                      D  +E+           ++S   T F   + S     A++ ++EM + G
Sbjct: 409 VLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNG 468

Query: 598 LIPDEM 603
           + PDE+
Sbjct: 469 IDPDEI 474



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 69/307 (22%), Positives = 134/307 (43%), Gaps = 47/307 (15%)

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL--LPKLVCGLEV-----E 389
           + G+Y ++L + + ++     PD      +L T  + G F+L  +PK V  +E+     +
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDV-----ILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ 155

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            D+  YNAL++ FCK    + A ++ + M  K F+PD  ++  ++  LC   K+D A+ V
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215

Query: 450 YQGIVMNN--PAV---------------------------------NAHVHTAIVDRLIE 474
              ++ +N  P V                                 +   +  I+  + +
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
            G   +A ++ R   ++    DV+SY + +R LL  G+ EE   L ++M      PN  T
Sbjct: 276 EGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335

Query: 535 YRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMC 594
           Y +++ + C++  I+    LL+ + +  +  D ++   L     +      A+  L  M 
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395

Query: 595 NLGLIPD 601
           + G +PD
Sbjct: 396 SDGCLPD 402


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 133/514 (25%), Positives = 230/514 (44%), Gaps = 54/514 (10%)

Query: 124 LFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKE 179
           + LR+  R    G+V   FD +      PN F  NIV+D L K G +     L +++   
Sbjct: 175 ILLRL-ARNRQGGLVRRLFDLLP----VPNVFTFNIVIDFLCKEGELVEARALFVRMKAM 229

Query: 180 TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEA 239
              P+ +++N  +    K  D+  V+ ++  M + G   +V  +  L+NCF K GR+ +A
Sbjct: 230 GCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKA 289

Query: 240 YQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG 299
           Y   G M   G   +V  ++  +D F +   +  A  L+ +M   G  PN  TYTSL+ G
Sbjct: 290 YSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDG 349

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG-------------------- 339
             +A     A   LD +  +G  P++V + V++D L K G                    
Sbjct: 350 TCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKAN 409

Query: 340 ---------------SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF----SLLP 380
                          + + ALD+ + +    +  D   + +L+  +C   +     SLL 
Sbjct: 410 ELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLH 469

Query: 381 KLV-CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
           K+  CGL    + V+Y  ++    KAG  ++AV L + +LD GF P+  ++  L+ GLC 
Sbjct: 470 KMAGCGLR--PNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCK 527

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
           A  I EAI+ +  +       N   +TA++D   + G  +KA+ L    I +   LD V 
Sbjct: 528 AGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVV 587

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           YT  I G ++    ++A+ L ++M    +  + Y Y   +  FC    ++  + +L ++I
Sbjct: 588 YTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMI 647

Query: 560 DARIELD---YHTSIRLTKFIFKFHSSSSAVNQL 590
              I  D   Y+  IR  + +     +SS  N++
Sbjct: 648 GTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEM 681



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 124/499 (24%), Positives = 220/499 (44%), Gaps = 58/499 (11%)

Query: 119 AQTFLLFLRIYWRGEMYGMVLEAFDEMGR--FGFTPNTFARNIVMDVLFKI----GRVDL 172
           A +  L  R+   G    +     D + R      P   A   V+D L  +    G +D 
Sbjct: 93  AHSRRLLSRLLGAGHRPHLAASLVDLLHRAALALGPRRSALPSVVDTLLSLLADHGLLDD 152

Query: 173 GIKVL---KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF----YPNVRMFEI 225
            ++ L   ++ ++P     N   CN   L    N +   G +VR+ F     PNV  F I
Sbjct: 153 AVRALARVRQLRVPP----NTRTCNHILLRLARNRQ---GGLVRRLFDLLPVPNVFTFNI 205

Query: 226 LLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
           +++  CK G + EA  L   M  +G S  V  +  LIDG+ +   L+    L  +M ++G
Sbjct: 206 VIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSG 265

Query: 286 CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL 345
           C+ +VVTY +LI  F +      A+S+   ++ +G   ++V  +  +D   K G   +A+
Sbjct: 266 CAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAM 325

Query: 346 DVYDGLLELKLVPDSYTFCSLLSTVCLSGRF-------------SLLPKLVC------GL 386
            ++  +    ++P+ +T+ SL+   C +GR               L+P +V       GL
Sbjct: 326 KLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGL 385

Query: 387 EVEADLVVYNALLSYFCKAGF-------------------PNQAVKLYNTMLDKGFTPDN 427
             E  +   + +LS   + G                      +A+ L N M +KG   D 
Sbjct: 386 CKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDV 445

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
             +  L+ GLC  +K+DEA ++   +       N  ++T I+D L +AG+  +A+ L  +
Sbjct: 446 SLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHK 505

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN 547
            +   +  +VV+Y   I GL + G   EA   +++M+ + + PN   Y  ++  FCK  +
Sbjct: 506 ILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGS 565

Query: 548 IKMVKRLLQDVIDARIELD 566
           +     L+ ++ID  + LD
Sbjct: 566 LNKAMHLMNEMIDKGMSLD 584



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 114/449 (25%), Positives = 194/449 (43%), Gaps = 37/449 (8%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV +++ +I+  ++  GR E      GE+ R G V    TF  F+  + +  +    ++ 
Sbjct: 269 DVVTYNALINCFSKF-GRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKL 327

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           F +M   G  PN F    ++D   K GR+D  I +L E      +PN +++ + +  LCK
Sbjct: 328 FAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCK 387

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              V+   +V+ +M R G   N  ++  L++          A  LL  M   G  L V+ 
Sbjct: 388 EGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSL 447

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  LI G  + +++D A  L  KM   G  PN V YT+++    +A   S A + L  + 
Sbjct: 448 YGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKIL 507

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G  P++V +  LID L K GS  +A+  ++ + EL L P+                  
Sbjct: 508 DSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPN------------------ 549

Query: 378 LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
                     V+A    Y AL+  FCK G  N+A+ L N M+DKG + D   +  L+ G 
Sbjct: 550 ----------VQA----YTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGY 595

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
                + +A  +   ++ +   ++ + +T  +          +A  +    I      D 
Sbjct: 596 MKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDK 655

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
             Y   IR   + G  EEA  L ++M+ +
Sbjct: 656 TVYNCLIRKYQKLGNMEEASSLQNEMESV 684



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 106/481 (22%), Positives = 202/481 (41%), Gaps = 37/481 (7%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV +++ +I    +  G  E V  +V E+ + GC     T+   +  + +          
Sbjct: 234 DVVTYNSLIDGYGK-CGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSY 292

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           F EM R G   N    +  +D   K G V   +K+  + +    +PN  ++   +   CK
Sbjct: 293 FGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCK 352

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              + +   ++  MV +G  PNV  + ++++  CK G++AEA  +L LM   G   +   
Sbjct: 353 AGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELL 412

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T LI G       + A  L  +M   G   +V  Y +LI G  + +    A S L  + 
Sbjct: 413 YTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMA 472

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G  P+ V +  ++D L K G   +A+ +   +L+    P+  T+C             
Sbjct: 473 GCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYC------------- 519

Query: 378 LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
                              AL+   CKAG  ++A+  +N M + G  P+  ++  L+ G 
Sbjct: 520 -------------------ALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGF 560

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
           C    +++A+++   ++    +++  V+T+++D  ++      A  L  + I     LD+
Sbjct: 561 CKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDL 620

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
             YT  I G       +EA  + S+M    + P+   Y  ++  + K  N++    L  +
Sbjct: 621 YCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNE 680

Query: 558 V 558
           +
Sbjct: 681 M 681


>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
 gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
          Length = 729

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 118/560 (21%), Positives = 235/560 (41%), Gaps = 45/560 (8%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D  +F+ +I  +  + GR      +  ++   GC     T+ + L    +   Y   +  
Sbjct: 161 DTFTFNPLIRALC-VRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVL 219

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL------------------------ 177
            DEM   G  P+    N++++ +   G VD  + +L                        
Sbjct: 220 LDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCG 279

Query: 178 ----KETQ-----------LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
               KE +            P+ ++FN  + +LC+   V     V+  M   G  P++  
Sbjct: 280 SERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVT 339

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           +  +L+  C +GR+ +A +LL  + + G      A+T ++ G   + + + A  L  +MV
Sbjct: 340 YSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMV 399

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
            + C P+ VT+ ++I    +  +   A   ++ +   G  PD+V +N +ID L      D
Sbjct: 400 CSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCID 459

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALL 399
           DA+++   L      PD  TF +LL  +C   R+    +L+  +   +   D   +N ++
Sbjct: 460 DAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVI 519

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
           +  C+ G   QA++    M + G  P+  ++  ++  L  A K  EA+ +  G  M N  
Sbjct: 520 TSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSG--MTNGT 577

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            +   +  ++  + +AG+  +A+ L R  +      D ++Y     G+     T+ A  +
Sbjct: 578 PDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRM 637

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK 579
             +++ + + P+A  Y  +LL FC+     +       ++ +    D  T I L + +  
Sbjct: 638 LCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAY 697

Query: 580 FHSSSSAVNQLVEMCNLGLI 599
                 A   LV +C+LG++
Sbjct: 698 ECLLDEAKQLLVNLCSLGVL 717



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 111/448 (24%), Positives = 201/448 (44%), Gaps = 10/448 (2%)

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
           R  + D L  +  +  G    K   LP  +  NI +  LC    V++ + V   +   G 
Sbjct: 71  REEIDDALALVDSIASGGGSGKCLPLP-VVPCNILIKRLCSGGRVADAERVFATL---GA 126

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
              V  +  ++N +C+ GRI +A +L+  M     + + N    LI       R+  A  
Sbjct: 127 SATVVTYNTMVNGYCRAGRIEDARRLISGMPFPPDTFTFNP---LIRALCVRGRVPDALA 183

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           +++ M+  GCSP+VVTY+ L+    +A  +  A   LD + ++G  PD+V +NVLI+ + 
Sbjct: 184 VFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMC 243

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLV 393
             G  D+AL++   L      PD+ T+  +L ++C S R+  + +L   +   +   D V
Sbjct: 244 NEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEV 303

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            +N +++  C+ G  ++A+K+ + M + G  PD  ++  +L GLC   ++D+A+ +   +
Sbjct: 304 TFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRL 363

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
                  +   +T ++  L    +   A +L    +    P D V++   I  L + G  
Sbjct: 364 KSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLV 423

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
           + A  +  QM      P+  TY  ++   C ER I     LL ++     + D  T   L
Sbjct: 424 DRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTL 483

Query: 574 TKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            K +        A   +V M +    PD
Sbjct: 484 LKGLCSVDRWEDAEQLMVNMMHSDCPPD 511



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 102/414 (24%), Positives = 178/414 (42%), Gaps = 4/414 (0%)

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP-NFLSFNIALCN 194
           G V +A       G +      N +++   + GR++   +++     P +  +FN  +  
Sbjct: 112 GRVADAERVFATLGASATVVTYNTMVNGYCRAGRIEDARRLISGMPFPPDTFTFNPLIRA 171

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           LC    V +   V   M+ +G  P+V  + ILL+  CK     +A  LL  M   G    
Sbjct: 172 LCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPD 231

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           +  + VLI+       +D A  +   +  +GC P+ VTYT ++K    ++ +        
Sbjct: 232 IVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFA 291

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            + S   APD V  N ++  L + G  D A+ V D + E   +PD  T+ S+L  +C  G
Sbjct: 292 EMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVG 351

Query: 375 RFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
           R     +L+  L+    + D + Y  +L   C       A +L   M+     PD  +F 
Sbjct: 352 RVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFN 411

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            ++  LC    +D AI V + +  N    +   + +I+D L        A++L       
Sbjct: 412 TVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSY 471

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
               D+V++   ++GL    R E+A  L   M H   PP+A T+  ++ S C++
Sbjct: 472 GCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQK 525


>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 817

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 114/444 (25%), Positives = 203/444 (45%), Gaps = 7/444 (1%)

Query: 122 FLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVL 177
           F   +  + +G      +E F +M   G  PN    N V+D L   GR D       K++
Sbjct: 255 FTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMV 314

Query: 178 KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIA 237
           +    P  ++++I +  L K   + +   V+  M  KGF PNV ++  L++   + G + 
Sbjct: 315 ERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLN 374

Query: 238 EAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLI 297
           +A ++  LM++ G SL+ + +  LI G+ +  + D+A  L ++M+  G + N  ++TS+I
Sbjct: 375 KAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVI 434

Query: 298 KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
                  MF  A  F+  +     +P       LI  L K G +  A++++   L    +
Sbjct: 435 CLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFL 494

Query: 358 PDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKL 414
            D+ T  +LL  +C +G+      + K + G     D V YN L+S  C     ++A   
Sbjct: 495 VDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMF 554

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
            + M+ KG  PDNY++  L+RGL    K++EAI  +     N    + + ++ ++D   +
Sbjct: 555 MDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCK 614

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
           A R  +  +LF   +      + V Y   I      GR   A  L   MKH  + PN+ T
Sbjct: 615 AERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSAT 674

Query: 535 YRVMLLSFCKERNIKMVKRLLQDV 558
           Y  ++        ++  K LL+++
Sbjct: 675 YTSLIKGMSIISRVEEAKLLLEEM 698



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 108/420 (25%), Positives = 192/420 (45%), Gaps = 39/420 (9%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+  + NI L +L +  +     +    +V KG  P+V +F   +N FCK G++ EA +L
Sbjct: 216 PSKTTCNILLTSLVRATEFQKCCEAF-HVVCKGVSPDVYLFTTAINAFCKGGKVEEAIEL 274

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
              M   G   +V  +  +IDG     R D A    EKMV+ G  P ++TY+ L+KG  +
Sbjct: 275 FSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSILVKGLTK 334

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
           AK    A+  L  +  +G  P+++ +N LID L + GS + A+++ D ++   L   S T
Sbjct: 335 AKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSST 394

Query: 363 FCSLLSTVCLSGRFSLLPKL-------------------VC----------GLEVEADLV 393
           + +L+   C SG+  +  +L                   +C           L    +++
Sbjct: 395 YNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEML 454

Query: 394 VYN---------ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
           + N          L+S  CK G  ++AV+L+   L+KGF  D  +   LL GLC A K++
Sbjct: 455 LRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLE 514

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
           E   + + I+     ++   +  ++       +  +A       + +    D  +Y++ I
Sbjct: 515 EGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILI 574

Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
           RGLL   + EEA   +   K   + P+ YTY VM+   CK    +  ++L  +++   ++
Sbjct: 575 RGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQ 634



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/418 (23%), Positives = 192/418 (45%), Gaps = 7/418 (1%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFL----SFNIALC 193
            +E  D M   G +  +   N ++    K G+ D+  ++LKE     F     SF   +C
Sbjct: 376 AIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVIC 435

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
            LC  +   +    +G M+ +   P   +   L++  CK G+ ++A +L    +  G  +
Sbjct: 436 LLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLV 495

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
                  L+ G     +L+    + ++++  G   + V+Y +LI G    K    AF F+
Sbjct: 496 DTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFM 555

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           D +  +G  PD   +++LI  L  M   ++A+  +       ++PD YT+  ++   C +
Sbjct: 556 DEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKA 615

Query: 374 GRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
            R     KL   +    ++ + VVYN L+  +C++G  + A++L   M  KG +P++ ++
Sbjct: 616 ERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATY 675

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             L++G+    +++EA  + + + M     N   +TA++D   + G+  K   L R    
Sbjct: 676 TSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHS 735

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
           +    + ++YTV I G    G   EA  L  +M+   + P++ TY+  +  + K+  +
Sbjct: 736 KNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKEFIYGYLKQGGV 793


>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
          Length = 708

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 121/457 (26%), Positives = 211/457 (46%), Gaps = 10/457 (2%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G+ +    +V E+   G V   QT    L +     +  +    F EM + G +P+  + 
Sbjct: 168 GKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSF 227

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNL-----CKLNDVSNVKDVIGMMV 212
            +++     +GRV    K L       F+  N A C L     C+   V+ V      MV
Sbjct: 228 KLMVVACCNMGRVLEAEKWLNAMVERGFIVDN-ATCTLIIDAFCQKGYVNRVVGYFWKMV 286

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
             G  PNV  F  L+N  CK G I +A++LL  M+  G   +V   T LIDG  +    +
Sbjct: 287 EMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTE 346

Query: 273 MAGYLWEKMVQ-NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
            A  L+ K+V+ +G  PNV TYT++I G+ +    + A   L  ++ +G  P+   +  L
Sbjct: 347 KAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTL 406

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV--- 388
           ID   K+G++  A ++ D + +    P+ YT+ +++  +C  G      +L+  + V   
Sbjct: 407 IDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGL 466

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
           +AD V Y  L+S  C+    N+++  +N ML  GFTPD +S+  L+   C  +++ E+  
Sbjct: 467 QADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESER 526

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           +++  V          +T+++      G    A++LF+R        D ++Y   I GL 
Sbjct: 527 LFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLC 586

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
           +  + ++A  LY  M    + P   T   +   +CK+
Sbjct: 587 KESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKK 623



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 102/406 (25%), Positives = 189/406 (46%), Gaps = 18/406 (4%)

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M ++G  P+   F++++   C MGR+ EA + L  M+  G  +     T++ID F +   
Sbjct: 215 MCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGY 274

Query: 271 LD-MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHN 329
           ++ + GY W KMV+ G +PNV+ +T+LI G  +      AF  L+ +   G  P++  H 
Sbjct: 275 VNRVVGYFW-KMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHT 333

Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLV------PDSYTFCSLLSTVCLSGRFSLLPKLV 383
            LID L K G  + A  ++     LKLV      P+ +T+ ++++  C   + +    L+
Sbjct: 334 TLIDGLCKKGWTEKAFRLF-----LKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLL 388

Query: 384 CGLEVEADLV----VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
             ++ E  LV     Y  L+   CK G   +A +L + M  +GF+P+ Y++  ++ GLC 
Sbjct: 389 SRMQ-EQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCK 447

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
              +DEA  +   + ++    +   +T ++         ++++  F + +   +  D+ S
Sbjct: 448 KGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHS 507

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           YT  I       + +E+  L+ +   + + P   TY  M+  +C+  N  +  +L Q + 
Sbjct: 508 YTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMS 567

Query: 560 DARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWR 605
           +     D  T   L   + K      A N    M + GL P E+ R
Sbjct: 568 NHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTR 613



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 117/515 (22%), Positives = 216/515 (41%), Gaps = 28/515 (5%)

Query: 52  IVHSTLLNCPSDL--------IALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETV 103
           +  +  LNC  D+        IA + F+    QR    D  SF  M+     + GR    
Sbjct: 186 VXSTQTLNCVLDVAVGMGLVEIAENMFVEMC-QRGVSPDCVSFKLMVVACCNM-GRVLEA 243

Query: 104 RGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDV 163
              +  +   G ++   T  L +  + +      V+  F +M   G  PN      +++ 
Sbjct: 244 EKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALING 303

Query: 164 LFKIGRVDLGIKVLKET----QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK-GFYP 218
           L K G +    ++L+E       PN  +    +  LCK         +   +VR  G+ P
Sbjct: 304 LCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKP 363

Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
           NV  +  ++N +CK  ++  A  LL  M   G   + N +T LIDG  ++     A  L 
Sbjct: 364 NVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELM 423

Query: 279 EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
           + M + G SPN+ TY ++I G  +      A+  L+ +   G   D V + +L+    + 
Sbjct: 424 DLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQ 483

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVY 395
              + +L  ++ +L++   PD +++ +L+S  C   +     +L      L +      Y
Sbjct: 484 ADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTY 543

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
            +++  +C+ G  + AVKL+  M + G  PD+ ++  L+ GLC   K+D+A N+Y  ++ 
Sbjct: 544 TSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMD 603

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
              +        +     +      AI +  R    ++   + +    +R L   G+ + 
Sbjct: 604 KGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQW---IRTVNTLVRKLCSEGKLDM 660

Query: 516 AYILYSQMKHIAVPPNAYTYRVMLLSF---CKERN 547
           A + + ++  +   PN    RV LL F   C E N
Sbjct: 661 AALFFHKL--LDKEPNV--NRVTLLGFMNKCYESN 691



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 89/380 (23%), Positives = 159/380 (41%), Gaps = 40/380 (10%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIK-----VLKETQLPNFLSFNIAL 192
             E  +EM R G+ PN +    ++D L K G  +   +     V  +   PN  ++   +
Sbjct: 313 AFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMI 372

Query: 193 CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
              CK + ++  + ++  M  +G  PN   +  L++  CK+G    AY+L+ LM   G S
Sbjct: 373 NGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFS 432

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
            ++  +  +IDG  +   LD A  L  K+  +G   + VTYT L+         + +  F
Sbjct: 433 PNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVF 492

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
            + +   G  PD+  +  LI    +     ++  +++  + L L+P   T+ S++   C 
Sbjct: 493 FNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCR 552

Query: 373 SGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP---- 425
            G  SL  KL   +       D + Y AL+S  CK    + A  LY+ M+DKG +P    
Sbjct: 553 YGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVT 612

Query: 426 ------------DNYSFVGLL----------------RGLCGARKIDEAINVYQGIVMNN 457
                       D+ + + +L                R LC   K+D A   +  ++   
Sbjct: 613 RLTLAYEYCKKDDSSTAINVLDRLEKRQWIRTVNTLVRKLCSEGKLDMAALFFHKLLDKE 672

Query: 458 PAVNAHVHTAIVDRLIEAGR 477
           P VN       +++  E+ +
Sbjct: 673 PNVNRVTLLGFMNKCYESNK 692


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 121/501 (24%), Positives = 223/501 (44%), Gaps = 7/501 (1%)

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
           + +V  + + +T    L    +   +G+ +E FD+M   G  P+ +    V+  L ++  
Sbjct: 183 MTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKD 242

Query: 170 VDLGIKVLKETQLP----NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEI 225
           +    +++ + +      N + +N+ +  LCK   V     +   +  K   P+V  +  
Sbjct: 243 LSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCT 302

Query: 226 LLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
           L+   CK+       +++  M+ L  S S  A + L++G R+  +++ A  L +++ + G
Sbjct: 303 LVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFG 362

Query: 286 CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL 345
            SPN+  Y +LI    + + F  A    D +   G  P+ V +++LID   + G  D AL
Sbjct: 363 VSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTAL 422

Query: 346 DVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYF 402
                ++++ L P  Y + SL++  C  G  S    L+  +   ++E  +V Y +L+  +
Sbjct: 423 SFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGY 482

Query: 403 CKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNA 462
           C  G  N+A++LY+ M  KG  P  Y+F  LL GL  A  I +A+ ++  +   N   N 
Sbjct: 483 CSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNR 542

Query: 463 HVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQ 522
             +  +++   E G   KA +     I +    D  SY   I GL   G+  EA +    
Sbjct: 543 VTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDG 602

Query: 523 MKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHS 582
           +       N   Y  +L  FC+E  ++    + QD+    ++LD      L     K   
Sbjct: 603 LHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKD 662

Query: 583 SSSAVNQLVEMCNLGLIPDEM 603
               +  L EM + GL PD++
Sbjct: 663 RKVFLGLLKEMHDRGLKPDDV 683



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 136/566 (24%), Positives = 234/566 (41%), Gaps = 50/566 (8%)

Query: 95  RLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNT 154
           R  G+ E    +V  +A  G       +   +    +G  +      FD MG+ G  PN 
Sbjct: 343 RKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPND 402

Query: 155 FARNIVMDVLFKIGRVDLGIKVLKET----QLPNFLSFNIALCNLCKLNDVSNVKDVIGM 210
              +I++D+  + G++D  +  L E       P+   +N  +   CK  D+S  + ++  
Sbjct: 403 VTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAE 462

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M+ K   P V  +  L+  +C  G+I +A +L   M   G   S+  +T L+ G  R   
Sbjct: 463 MINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGL 522

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           +  A  L+ +M +    PN VTY  +I+G+ E    S AF FL+ +  +G  PD   +  
Sbjct: 523 IRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRP 582

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS------------- 377
           LI  L   G   +A    DGL +     +   +  LL   C  G+               
Sbjct: 583 LIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRG 642

Query: 378 LLPKLVC------------------GLEVE-------ADLVVYNALLSYFCKAGFPNQAV 412
           +   LVC                  GL  E        D V+Y +++    K G   +A 
Sbjct: 643 VDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAF 702

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
            +++ M+++G  P+  ++  ++ GLC A  ++EA  +   +   N   N   +   +D L
Sbjct: 703 GIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDIL 762

Query: 473 IEA-GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
            +  G   KA++L   AI++    +  +Y + IRG    GR EEA  L ++M    V P+
Sbjct: 763 TKGVGDMKKAVEL-HNAILKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPD 821

Query: 532 AYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD---YHTSIRLTKFIFKFHSSSSAVN 588
             TY  M+   C+  ++K    L   + +  I  D   Y+T I       +   ++   N
Sbjct: 822 CITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRN 881

Query: 589 QLVEMCNLGLIPDEMWRKLGLLSDET 614
              EM   GL P+    +  + +D +
Sbjct: 882 ---EMLRQGLKPNTETSETTISNDSS 904



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 109/418 (26%), Positives = 184/418 (44%), Gaps = 42/418 (10%)

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCN 194
           LE  DEM R  F+P+  A + +++ L K G+V+  + ++K        PN   +N  + +
Sbjct: 317 LEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDS 376

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           LCK  +    + +   M + G  PN   + IL++ FC+ G++  A   LG MI +G   S
Sbjct: 377 LCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPS 436

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           V  +  LI+G  +   +  A  L  +M+     P VVTYTSL+ G+              
Sbjct: 437 VYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSK----------- 485

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
                                   G  + AL +Y  +    +VP  YTF +LLS +  +G
Sbjct: 486 ------------------------GKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAG 521

Query: 375 RFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
                 KL   +    V+ + V YN ++  +C+ G  ++A +  N M++KG  PD YS+ 
Sbjct: 522 LIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYR 581

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            L+ GLC   +  EA     G+   N  +N   +T ++      G+  +A+ + +   + 
Sbjct: 582 PLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLR 641

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
              LD+V Y V I G L+    +    L  +M    + P+   Y  M+ +  K  + K
Sbjct: 642 GVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFK 699



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 94/398 (23%), Positives = 165/398 (41%), Gaps = 38/398 (9%)

Query: 210 MMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLR 269
           MM +    P VR    LL+   K      A +L   MI +G    V  +T +I     L+
Sbjct: 182 MMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELK 241

Query: 270 RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHN 329
            L  A  +  +M   GC  N+V Y  LI G  + +    A      L  +   PD+V + 
Sbjct: 242 DLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYC 301

Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL---LPKLVCGL 386
            L+  L K+  ++  L++ D +L L+  P      SL+  +   G+      L K V   
Sbjct: 302 TLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEF 361

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
            V  ++ VYNAL+   CK    ++A  L++ M   G  P++ ++  L+   C   K+D A
Sbjct: 362 GVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTA 421

Query: 447 IN---------VYQGIVMNNPAVNAH--------------------------VHTAIVDR 471
           ++         +   +   N  +N H                           +T+++  
Sbjct: 422 LSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGG 481

Query: 472 LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
               G+ +KA++L+     +     + ++T  + GL   G   +A  L+++M    V PN
Sbjct: 482 YCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPN 541

Query: 532 AYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
             TY VM+  +C+E N+      L ++I+  I  D ++
Sbjct: 542 RVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYS 579



 Score = 47.8 bits (112), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 52/227 (22%), Positives = 91/227 (40%), Gaps = 13/227 (5%)

Query: 86  FDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA---F 142
           +  MI   ++ TG F+   GI   +   GCV    T+   +    +    G V EA    
Sbjct: 685 YTSMIDAKSK-TGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKA---GFVNEAEILC 740

Query: 143 DEMGRFGFTPNTFARNIVMDVLFK-IG----RVDLGIKVLKETQLPNFLSFNIALCNLCK 197
            +M      PN       +D+L K +G     V+L   +LK   L N  ++N+ +   C+
Sbjct: 741 SKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILK-GLLANTATYNMLIRGFCR 799

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              +    ++I  M+  G  P+   +  +++  C+   + +A +L   M   G      A
Sbjct: 800 QGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVA 859

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
           +  LI G      +  A  L  +M++ G  PN  T  + I     +K
Sbjct: 860 YNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTISNDSSSK 906


>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 133/501 (26%), Positives = 226/501 (45%), Gaps = 24/501 (4%)

Query: 125 FLRIYWRGEMYGM-VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP 183
           FLR    G +     L  F  M R   TP+  + N ++  L KI        +  + +L 
Sbjct: 39  FLRHCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLS 98

Query: 184 NFLS----FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEA 239
              S     NI L  LC +N +         ++R+G+ PN+  +  L+   C   RI+EA
Sbjct: 99  GLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEA 158

Query: 240 YQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN------GCSPNVVTY 293
            +L   M  LG +  V  +  LI G      +++A  L ++M+ +       C PNV+TY
Sbjct: 159 TRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITY 218

Query: 294 TSLIKGFM------EAKMFSIAFSFLDMLESE----GHAPDLVFHNVLIDCLSKMGSYDD 343
             ++ G        EAK          M+ +E    G  PD+V  NVLID L K G   +
Sbjct: 219 NIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIE 278

Query: 344 ALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLS 400
           A  +   ++E  +VPD  T+ SL+   C+ G  +   +L   +     E D++ YN L++
Sbjct: 279 AKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLIN 338

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
            + K     +A+KLYN ML  G  P+  ++  LL+G+  A K+D+A  ++  +  +  A 
Sbjct: 339 GYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAE 398

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
           N++ +   +D L +     +A++LF       + L++ +    I GL + G+ E A+ L+
Sbjct: 399 NSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELF 458

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKF 580
            ++ +    PN  TY +M+  FC+E  +     L+Q +       D  T   L +  ++ 
Sbjct: 459 EKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYES 518

Query: 581 HSSSSAVNQLVEMCNLGLIPD 601
           +     V  L  M    + PD
Sbjct: 519 NKLEEVVQLLHRMAQKDVSPD 539



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 102/426 (23%), Positives = 197/426 (46%), Gaps = 25/426 (5%)

Query: 86  FDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEM 145
            +H IS  TRL  R + + G   ++   G +IK       + I  +     +  E  +++
Sbjct: 151 MEHRISEATRLFLRMQKL-GCTPDVVTYGTLIKGLCGTGNINIALK-----LHQEMLNDI 204

Query: 146 GRFGFT--PNTFARNIVMDVLFKIGRVDLGIKVLKETQL--------------PNFLSFN 189
            R+     PN    NI++D L K+GR D   ++ +E +               P+ ++FN
Sbjct: 205 SRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFN 264

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
           + +  LCK   V   K ++G+M+  G  P++  +  L+  FC +G +  A +L   M + 
Sbjct: 265 VLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSK 324

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           G    V ++ VLI+G+ +  +++ A  L+ +M+  G  PNV+TY SL+KG   A     A
Sbjct: 325 GCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDA 384

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
                ++++ G A +   + + +D L K     +A+ ++  L       +      L+  
Sbjct: 385 KKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDG 444

Query: 370 VCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
           +C +G+     +L   L  E    ++V Y  ++  FC+ G  ++A  L   M   G TPD
Sbjct: 445 LCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPD 504

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
             ++  L+RG   + K++E + +   +   + + +A   + +VD L +  +  + + L  
Sbjct: 505 IITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLP 564

Query: 487 RAIVEK 492
           R  ++K
Sbjct: 565 RFPIQK 570



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 125/548 (22%), Positives = 232/548 (42%), Gaps = 43/548 (7%)

Query: 48  LAPHIVHSTLLNCPSDLIALSFFIWCAKQRD--------YFH---------DVQSFDHMI 90
           L+    HS+ +  P+  IA  FF+   K  +        +FH          + SF+H++
Sbjct: 19  LSSLFTHSSAIPSPNPQIA--FFLRHCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLL 76

Query: 91  SVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGF 150
           S + ++   +  V  +  ++   G      T  + L              AF  + R G+
Sbjct: 77  SGLAKIK-HYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGY 135

Query: 151 TPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKD 206
           +PN    N ++  L    R+    ++    Q     P+ +++   +  LC   +++    
Sbjct: 136 SPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALK 195

Query: 207 VIGMMVRK------GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT--------- 251
           +   M+           PNV  + I+++  CK+GR  EA QL   M T G          
Sbjct: 196 LHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQG 255

Query: 252 -SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
               +  + VLID   +  ++  A  L   M+++G  P++VTY SLI+GF      + A 
Sbjct: 256 LQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSAR 315

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
                + S+G  PD++ +NVLI+  SK    ++A+ +Y+ +L +   P+  T+ SLL  +
Sbjct: 316 ELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGI 375

Query: 371 CLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
            L+G+     KL   ++   +  +   Y   L   CK     +A+KL+  +    F  + 
Sbjct: 376 FLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEI 435

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
            +   L+ GLC A K++ A  +++ +       N   +T ++      G+  KA  L ++
Sbjct: 436 ENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQK 495

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN 547
                   D+++Y   +RG  E  + EE   L  +M    V P+A T  +++    K+  
Sbjct: 496 MEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEK 555

Query: 548 IKMVKRLL 555
            +    LL
Sbjct: 556 YQECLHLL 563



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 99/228 (43%), Gaps = 12/228 (5%)

Query: 396 NALLSYF---CKAG--FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           N  +++F   CK G      A+  ++ M+    TP   SF  LL GL   +   +  ++Y
Sbjct: 33  NPQIAFFLRHCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLY 92

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
             + ++  + +      +++ L    R  +    F   +   Y  ++V+Y   I+GL   
Sbjct: 93  NQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCME 152

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID--ARIELDYH 568
            R  EA  L+ +M+ +   P+  TY  ++   C   NI +  +L Q++++  +R E++  
Sbjct: 153 HRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCK 212

Query: 569 TSIRLTKFIF----KFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSD 612
            ++     I     K      A     EM   G+IP+EM  + GL  D
Sbjct: 213 PNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQ-GLQPD 259


>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 130/552 (23%), Positives = 250/552 (45%), Gaps = 48/552 (8%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFL-L 124
           ALS+F   ++     H  ++ + M+  + R+  + E +  +   + +        T+L +
Sbjct: 105 ALSYFYSISEFPTVLHTTETCNFMLEFL-RVHDKVEDMAAVFEFMQKKIIRRDLDTYLTI 163

Query: 125 FLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ET 180
           F  +  RG +  M     ++M + GF  N ++ N ++ +L + G     ++V +    E 
Sbjct: 164 FKALSIRGGLRQMTT-VLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEG 222

Query: 181 QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAY 240
             P+  +++  +  L K  D   V  ++  M   G  PNV  F I +    + G+I EAY
Sbjct: 223 LKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAY 282

Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
           ++   M   G    +  +TVLID      +L+ A  L+ KM  NG  P+ V Y +L+  F
Sbjct: 283 EIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKF 342

Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
            +         F   +E++G+ PD+V   +L+D L K   +D+A   +D + +  ++P+ 
Sbjct: 343 NDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNL 402

Query: 361 YTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVK---- 413
           +T+ +L+  +  +GR     KL+  +E   V+     Y   + YF K+G   +AV+    
Sbjct: 403 HTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEK 462

Query: 414 -------------------------------LYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
                                          ++N + + G  PD+ ++  +++      +
Sbjct: 463 MKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQ 522

Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTV 502
           +DEA+N+   ++ N    +  V  +++D L +AGR  +A Q+F R    K    VV+Y  
Sbjct: 523 VDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNT 582

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD--VID 560
            + GL + GR ++A  L+  M      PN  ++  +L  FCK   +++  ++     V+D
Sbjct: 583 LLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMD 642

Query: 561 ARIE-LDYHTSI 571
            + + L Y+T I
Sbjct: 643 CKPDVLTYNTVI 654



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 102/401 (25%), Positives = 183/401 (45%), Gaps = 29/401 (7%)

Query: 40   THQDFPIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGR 99
               D  II A  +V + +    S LI L   + C  +R+ +   Q FD           +
Sbjct: 731  AEMDKAIIFAEELVLNGICREDSFLIPL-VRVLCKHKRELYA-YQIFD-----------K 777

Query: 100  FETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNI 159
            F    GI   LA   C+I     + +    W         + F +M   G  P+ F  N+
Sbjct: 778  FTKKLGISPTLASYNCLIGELLEVHYTEKAW---------DLFKDMKNVGCAPDAFTFNM 828

Query: 160  VMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG 215
            ++ V  K G++    ++ KE       P+ +++NI + +L K N++    D    +V   
Sbjct: 829  LLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSD 888

Query: 216  FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAG 275
            F P  R +  L++   K+GR+ EA +L   M   G   +   + +LI+G+ ++   + A 
Sbjct: 889  FRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETAC 948

Query: 276  YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
             L+++MV  G  P++ +YT L+     A     A  + + L+S G  PD + +N +I+ L
Sbjct: 949  QLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGL 1008

Query: 336  SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADL 392
             K    ++AL +Y+ +    +VPD YT+ SL+  + L+G      ++   L+   +E D+
Sbjct: 1009 GKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDV 1068

Query: 393  VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
              YNAL+  +  +  P  A  +Y  M+  G  P+  ++  L
Sbjct: 1069 FTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/397 (22%), Positives = 176/397 (44%), Gaps = 3/397 (0%)

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
           V+  M + GF  N   +  L++   + G   EA ++   M++ G   S+  ++ L+    
Sbjct: 179 VLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALG 238

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
           + R  +M   L ++M   G  PNV T+T  I+    A     A+     ++ EG  PDLV
Sbjct: 239 KKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLV 298

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL 386
            + VLID L   G  ++A +++  +      PD   + +LL      G      +    +
Sbjct: 299 TYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQM 358

Query: 387 EVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
           E +    D+V +  L+   CKA   ++A   ++ M  +G  P+ +++  L+ GL  A +I
Sbjct: 359 EADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRI 418

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           ++A+ +   +        A+ +   +D   ++G   KA++ F +   +    ++V+   +
Sbjct: 419 EDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNAS 478

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           +  L E GR  EA  +++ ++   + P++ TY +M+  + K   +     LL ++I    
Sbjct: 479 LYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGC 538

Query: 564 ELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           E D      L   ++K      A      M ++ L P
Sbjct: 539 EPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSP 575



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 121/584 (20%), Positives = 229/584 (39%), Gaps = 82/584 (14%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G  +T +    ++   G +    TF + + +  +   +      FD M + G  PN    
Sbjct: 346 GDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTY 405

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N ++  L + GR++  +K+L   +     P   ++   +    K  +     +    M  
Sbjct: 406 NTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKA 465

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           KG  PN+      L    +MGR+ EA  +   +   G +     + +++  + ++ ++D 
Sbjct: 466 KGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDE 525

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L  +M++NGC P+V+   SLI    +A     A+   D ++    +P +V +N L+ 
Sbjct: 526 AVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLS 585

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV---EA 390
            L K G    A+++++ ++  K  P++ +F +LL   C +    L  K+   + V   + 
Sbjct: 586 GLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKP 645

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           D++ YN ++    K    N A   ++  L K   PD+ +   LL GL    +I +AI++ 
Sbjct: 646 DVLTYNTVIYGLIKENKVNHAFWFFH-QLKKSMHPDHVTICTLLPGLVKCGQIGDAISIA 704

Query: 451 QGI---------------VMNNPAVNAHVHTAIV--DRLIEAGRC--------------- 478
           +                 +M    V A +  AI+  + L+  G C               
Sbjct: 705 RDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCK 764

Query: 479 HKAIQLFRRAIVEKYPLDV------VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
           HK  +L+   I +K+   +       SY   I  LLE   TE+A+ L+  MK++   P+A
Sbjct: 765 HKR-ELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDA 823

Query: 533 YT-----------------------------------YRVMLLSFCKERNIKMVKRLLQD 557
           +T                                   Y +++ S  K  N+        D
Sbjct: 824 FTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYD 883

Query: 558 VIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           ++ +       T   L   + K      A+    EM + G  P+
Sbjct: 884 LVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPN 927



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 120/533 (22%), Positives = 225/533 (42%), Gaps = 24/533 (4%)

Query: 51  HIVHSTLLNCPSDLIALSFF--IWCAKQRD-YFHDVQSFDHMISVVTRLTGRFETVRGIV 107
            +++ TLL+  +D   L  F   W   + D Y  DV +F  ++ V+ +    F+      
Sbjct: 332 QVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARD-FDEAFATF 390

Query: 108 GELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKI 167
             + + G +    T+   +    R       L+  D M   G  P  +     +D   K 
Sbjct: 391 DVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKS 450

Query: 168 GRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMF 223
           G     ++  ++ +    +PN ++ N +L +L ++  +   K +   +   G  P+   +
Sbjct: 451 GETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTY 510

Query: 224 EILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQ 283
            +++ C+ K+G++ EA  LL  MI  G    V     LID   +  R+D A  ++++M  
Sbjct: 511 NMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKD 570

Query: 284 NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
              SP VVTY +L+ G  +      A    + +  +  +P+ +  N L+DC  K    + 
Sbjct: 571 MKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVEL 630

Query: 344 ALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-------FSLLPKLVCGLEVEADLVVYN 396
           AL ++  +  +   PD  T+ +++  +    +       F  L K      +  D V   
Sbjct: 631 ALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKK-----SMHPDHVTIC 685

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF-VGLLRGLCGARKIDEAINVYQGIVM 455
            LL    K G    A+ +    + +     N SF   L+ G     ++D+AI   + +V+
Sbjct: 686 TLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVL 745

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD--VVSYTVAIRGLLEGGRT 513
           N           +V  L +  R   A Q+F +   +K  +   + SY   I  LLE   T
Sbjct: 746 NGICREDSFLIPLVRVLCKHKRELYAYQIFDK-FTKKLGISPTLASYNCLIGELLEVHYT 804

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           E+A+ L+  MK++   P+A+T+ ++L    K   I  +  L +++I  R + D
Sbjct: 805 EKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPD 857



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 113/506 (22%), Positives = 219/506 (43%), Gaps = 49/506 (9%)

Query: 138  VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALC 193
             +E F+ M     +PNT + N ++D   K   V+L +K+  +  +    P+ L++N  + 
Sbjct: 596  AIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIY 655

Query: 194  NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL-GLMITLGTS 252
             L K N V++       + +K  +P+      LL    K G+I +A  +    M  +   
Sbjct: 656  GLIKENKVNHAFWFFHQL-KKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFR 714

Query: 253  LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
            ++ + W  L+ G      +D A    E++V NG          L++   + K    A+  
Sbjct: 715  VNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQI 774

Query: 313  LDMLESE-GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
             D    + G +P L  +N LI  L ++   + A D++  +  +   PD++TF  LL+   
Sbjct: 775  FDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHG 834

Query: 372  LSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
             SG+ + L +L   +     + D + YN ++S   K+   ++A+  +  ++   F P   
Sbjct: 835  KSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPR 894

Query: 429  SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
            ++  L+ GL    +++EA+ +++ +       N  +   +++   + G    A QLF+R 
Sbjct: 895  TYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRM 954

Query: 489  IVEKYPLDVVSYTV-----------------------------------AIRGLLEGGRT 513
            + E    D+ SYT+                                    I GL +  R 
Sbjct: 955  VNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRM 1014

Query: 514  EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD---YHTS 570
            EEA  LY++M++  + P+ YTY  ++L+      ++  KR+ +++  A +E D   Y+  
Sbjct: 1015 EEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNAL 1074

Query: 571  IRLTKFIFK-FHSSSSAVNQLVEMCN 595
            IR         H+ +   N +V+ CN
Sbjct: 1075 IRGYSLSENPEHAYTVYKNMMVDGCN 1100



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 106/504 (21%), Positives = 192/504 (38%), Gaps = 60/504 (11%)

Query: 56   TLLNCPSDLIALSFFIWCAKQRD-------YFHDVQSFDH--MISVVTRLTGRFETVRGI 106
            T+++C  D++  +  I+   + +       +FH ++   H   +++ T L G  +   G 
Sbjct: 639  TVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVKC--GQ 696

Query: 107  VGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGR-FGFTPNTFARNIVMDVLF 165
            +G+   +      Q      R +W   M G ++EA  EM +   F        I  +  F
Sbjct: 697  IGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEA--EMDKAIIFAEELVLNGICREDSF 754

Query: 166  KIGRVDLGIKVLKETQL--------------PNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
             I  V +  K  +E                 P   S+N  +  L +++      D+   M
Sbjct: 755  LIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDM 814

Query: 212  VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
               G  P+   F +LL    K G+I E ++L   MI+         + ++I    +   L
Sbjct: 815  KNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNL 874

Query: 272  DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
            D A   +  +V +   P   TY  LI G  +      A    + +   G  P+    N+L
Sbjct: 875  DKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNIL 934

Query: 332  IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEAD 391
            I+   K+G                   D+ T C L   +   G             +  D
Sbjct: 935  INGYGKIG-------------------DTETACQLFKRMVNEG-------------IRPD 962

Query: 392  LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
            L  Y  L+   C AG  ++A+  +N +   G  PD  ++  ++ GL  +++++EA+ +Y 
Sbjct: 963  LKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYN 1022

Query: 452  GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
             +       + + + +++  L  AG   +A +++    +     DV +Y   IRG     
Sbjct: 1023 EMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSE 1082

Query: 512  RTEEAYILYSQMKHIAVPPNAYTY 535
              E AY +Y  M      PN  TY
Sbjct: 1083 NPEHAYTVYKNMMVDGCNPNIGTY 1106


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/510 (22%), Positives = 225/510 (44%), Gaps = 38/510 (7%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR      ++ E++  GC      + + L    R   +   +   + M   G T +T   
Sbjct: 125 GRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNC 184

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N+V++ + + G VD  + +L++        + +S+N  L  LC      +V++++  MVR
Sbjct: 185 NLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVR 244

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
               PN+  F  L+   C+ G     +++L  M   G +  +  +  +IDG  +   L++
Sbjct: 245 VDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEV 304

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL-DMLESEGHAPDLVFHNVLI 332
           A  +  +M   G  PNVV Y +++KG   A+ +  A   L +M + +    D+ F N+L+
Sbjct: 305 ANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTF-NILV 363

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADL 392
           D   + G  D  +++ + +L    +PD                                +
Sbjct: 364 DFFCQNGLVDRVIELLEQMLSHGCMPD--------------------------------V 391

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           + Y  +++ FCK G  ++AV L  +M   G  P+  S+  +L+GLC A +  +A  +   
Sbjct: 392 ITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQ 451

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           ++      N      +++ L + G   +AI+L ++ +V     D++SY+  I GL + G+
Sbjct: 452 MIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 511

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
           TEEA  L + M +  + PN   Y  +  +  +E  +  V ++  ++ D  I  D      
Sbjct: 512 TEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNA 571

Query: 573 LTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
           +   + K   +  A++    M + G +P+E
Sbjct: 572 VISSLCKRWETDRAIDFFAYMVSNGCMPNE 601



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 114/465 (24%), Positives = 197/465 (42%), Gaps = 36/465 (7%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G  +   G++ +LA  GC     ++   L+     + +G V E  DEM R    PN    
Sbjct: 195 GCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTF 254

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N ++  L + G  +   +VL +       P+   +   +  +CK   +    +++  M  
Sbjct: 255 NTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G  PNV  +  +L   C   R  EA +LL  M      L    + +L+D F +   +D 
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
              L E+M+ +GC P+V+TYT++I GF +  +   A   L  + S G  P+ V + +++ 
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLV 393
            L   G + DA ++   +++    P+  TF                              
Sbjct: 435 GLCSAGRWVDAEELMSQMIQQGCPPNPVTF------------------------------ 464

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
             N L+++ CK G   QA++L   ML  G +PD  S+  ++ GL  A K +EA+ +   +
Sbjct: 465 --NTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 522

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
           V    + N  ++++I   L   GR +K IQ+F          D V Y   I  L +   T
Sbjct: 523 VNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWET 582

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           + A   ++ M      PN  TY +++     E   K  + LL ++
Sbjct: 583 DRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSEL 627



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 106/446 (23%), Positives = 210/446 (47%), Gaps = 15/446 (3%)

Query: 78  DYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGM 137
           D   ++ +F+ +I  + R  G FE V  ++ +++  GC    + +   +    +     +
Sbjct: 246 DCAPNIVTFNTLIGYLCR-NGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEV 304

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE---TQLP-NFLSFNIALC 193
             E  + M  +G  PN    N V+  L    R     ++L E      P + ++FNI + 
Sbjct: 305 ANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVD 364

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
             C+   V  V +++  M+  G  P+V  +  ++N FCK G I EA  LL  M + G   
Sbjct: 365 FFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKP 424

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
           +  ++T+++ G     R   A  L  +M+Q GC PN VT+ +LI    +  +   A   L
Sbjct: 425 NTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELL 484

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
             +   G +PDL+ ++ +ID L K G  ++AL++ + ++   + P++  + S+   +   
Sbjct: 485 KQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSRE 544

Query: 374 GRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           GR + + ++   ++   + +D V+YNA++S  CK    ++A+  +  M+  G  P+  ++
Sbjct: 545 GRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTY 604

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV--HTAIVDRLIEAGRCHKAIQLFRRA 488
             L++GL       EA  +   +  +  A+  H+  H  I +   E G+  K  +    A
Sbjct: 605 TMLIKGLASEGLAKEAQELLSELC-SRGALRKHLMRHFGISNCTQENGK-QKCEENLTSA 662

Query: 489 IVEKY--PLDVVSYTVAIRGLLEGGR 512
           +   Y  P++++ + + I+ L  G +
Sbjct: 663 VDNNYKLPIEILGF-LEIQNLRPGEK 687



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 112/506 (22%), Positives = 224/506 (44%), Gaps = 53/506 (10%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D+ S++ ++  +  +  R+  V  ++ E+ RV C     TF   +    R  ++  V E 
Sbjct: 215 DIVSYNAVLKGLC-MAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEV 273

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDV 201
             +M   G TP+      ++D + K G +++  ++L   ++P++                
Sbjct: 274 LAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILN--RMPSY---------------- 315

Query: 202 SNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVL 261
                        G  PNV  +  +L   C   R  EA +LL  M      L    + +L
Sbjct: 316 -------------GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNIL 362

Query: 262 IDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH 321
           +D F +   +D    L E+M+ +GC P+V+TYT++I GF +  +   A   L  + S G 
Sbjct: 363 VDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGC 422

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPK 381
            P+ V + +++  L   G + DA ++   +++    P+  TF +L++ +C  G      +
Sbjct: 423 KPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE 482

Query: 382 LVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
           L+  + V     DL+ Y+ ++    KAG   +A++L N M++KG +P+   +  +   L 
Sbjct: 483 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALS 542

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
              ++++ I ++  I       +A ++ A++  L +     +AI  F   +      +  
Sbjct: 543 REGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNES 602

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQM-------KHIAVPPNAYTYRVMLLSFCKERNIKMV 551
           +YT+ I+GL   G  +EA  L S++       KH+         R   +S C + N    
Sbjct: 603 TYTMLIKGLASEGLAKEAQELLSELCSRGALRKHL--------MRHFGISNCTQEN---G 651

Query: 552 KRLLQDVIDARIELDYHTSIRLTKFI 577
           K+  ++ + + ++ +Y   I +  F+
Sbjct: 652 KQKCEENLTSAVDNNYKLPIEILGFL 677



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/284 (22%), Positives = 114/284 (40%), Gaps = 40/284 (14%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
           Q+D   D  +F+ ++    +  G  + V  ++ ++   GC+    T+   +  + +  + 
Sbjct: 349 QKDCPLDDVTFNILVDFFCQ-NGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLI 407

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR----VDLGIKVLKETQLPNFLSFNIA 191
              +     M   G  PNT +  IV+  L   GR     +L  +++++   PN ++FN  
Sbjct: 408 DEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTL 467

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           +  LCK   V    +++  M+  G  P++  +  +++   K G+  EA +LL +M+  G 
Sbjct: 468 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGI 527

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYL--------------------------WEK----- 280
           S +   ++ +     R  R++    +                          WE      
Sbjct: 528 SPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAID 587

Query: 281 ----MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
               MV NGC PN  TYT LIKG     +   A   L  L S G
Sbjct: 588 FFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/237 (18%), Positives = 98/237 (41%), Gaps = 3/237 (1%)

Query: 365 SLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
           +L+ ++C +GR +   + +      A +V YNA+++ +C+AG   Q              
Sbjct: 52  ALIRSLCSAGRTAEAARALADAGDAAGVVAYNAMVAGYCRAG---QLAAARRLAAAVPVP 108

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           P+ Y+F  ++RGLC   +I +A+ V   +     A    ++  I++    +G    ++++
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
                 +   LD  +  + +  + E G  +EA  L  ++       +  +Y  +L   C 
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 545 ERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            +    V+ L+ +++      +  T   L  ++ +          L +M   G  PD
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 120/513 (23%), Positives = 225/513 (43%), Gaps = 10/513 (1%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG----IKVLKETQLPNFLSFNIALCNLCK 197
           FD+M   G +P+    N ++  L K   +D      ++++K   +PN ++ N  L   C 
Sbjct: 226 FDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCS 285

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
               ++   V   M R G  P+V  +  L+   CK GR  EA ++   M+  G   +   
Sbjct: 286 SGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSAT 345

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  L+ G+     L    +L + MV+NG  P+   +  LI  + +      A      + 
Sbjct: 346 YGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMR 405

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
            +G  PD V + +++D L  +G  DDA+  +  L+   L PD+  F +L+  +C   ++ 
Sbjct: 406 RQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWD 465

Query: 378 LLPKLVC---GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
              +L     G  +  + + +N LL++ CK G   +A  +++ M+      D  ++  L+
Sbjct: 466 KAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLI 525

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            G C   K+DEA  + +G+V++    N   +  +++   + GR   A  LFR+   +   
Sbjct: 526 DGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVN 585

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
             +V+Y+  ++GL +  RT  A  LY  M    +  +  TY ++LL  C+        R+
Sbjct: 586 PGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRI 645

Query: 555 LQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD--EMWRKLGLLSD 612
            Q++      L+  T   +   + K      A +    +   GL+P+    W  +  L +
Sbjct: 646 FQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIE 705

Query: 613 ETMTPVSLFDGFVPCERRAGNANHLLLNGGVGR 645
           + +        F+  E+    AN  +LN  VG+
Sbjct: 706 QGLLEELDDL-FLSLEKNGCTANSRMLNALVGK 737



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 117/474 (24%), Positives = 206/474 (43%), Gaps = 16/474 (3%)

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLND 200
           + R    PN    ++V+D   ++G +DL      +V++       ++F+  L  LC    
Sbjct: 82  VARPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKR 141

Query: 201 VSNVKDV-IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL-----GTSLS 254
            S   D+ +  M   G  PNV  + ILL   C   R  +A  LL  M+       G    
Sbjct: 142 TSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPD 201

Query: 255 VNAWTVLIDGF-RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
           V ++  +I+G  R  R+LD A +L+++M+  G SP+VVTY S+I    +A+    A   L
Sbjct: 202 VVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVL 261

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
             +   G  P+ + HN L+      G  +DA+ V+  +    + PD +T+ +L+  +C +
Sbjct: 262 VRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKN 321

Query: 374 GRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           GR     K+   +     + +   Y  LL  +   G   +   L + M+  G  PD+Y F
Sbjct: 322 GRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIF 381

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             L+       K+D+A+ ++  +       +   +  ++D L   G+   A+  F R I 
Sbjct: 382 NILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLIS 441

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
           E    D V +   I GL    + ++A  L  +M    + PN   +  +L   CKE  +  
Sbjct: 442 EGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVAR 501

Query: 551 VKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVE-MCNLGLIPDEM 603
            K +   ++   ++ D  T   L    +  H       +L+E M   G+ P+E+
Sbjct: 502 AKNIFDLMVRVDVQRDVITYNTLIDG-YCLHGKVDEAAKLLEGMVLDGVKPNEV 554



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/472 (21%), Positives = 201/472 (42%), Gaps = 43/472 (9%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV +++ +IS +++     +    ++  + + G +    T    L  Y         +  
Sbjct: 237 DVVTYNSIISALSKARA-MDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGV 295

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCK 197
           F  M R G  P+ F  N +M  L K GR     K+    +K    PN  ++   L     
Sbjct: 296 FKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYAT 355

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              +  +  ++ MMVR G  P+  +F IL+  + K G++ +A  L   M   G +     
Sbjct: 356 EGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVT 415

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           + +++D    + ++D A   + +++  G +P+ V + +LI G      +  A      + 
Sbjct: 416 YGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMI 475

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G  P+ +F N L++ L K G    A +++D ++ + +  D  T+ +L+   CL G+  
Sbjct: 476 GRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVD 535

Query: 378 LLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
              KL+ G+    V+ + V YN +++ +CK G    A  L+  M  KG  P   ++  +L
Sbjct: 536 EAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTIL 595

Query: 435 RGLCGARKI-----------------------------------DEAINVYQGIVMNNPA 459
           +GL  AR+                                    D+A+ ++Q + + +  
Sbjct: 596 QGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFH 655

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
           +       ++D L++ GR  +A  LF   +      +VV+Y + ++ L+E G
Sbjct: 656 LENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQG 707



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/395 (22%), Positives = 177/395 (44%), Gaps = 45/395 (11%)

Query: 210 MMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI---------------------- 247
           M+ R    PN+  + ++++C  ++G +  A+  LG +I                      
Sbjct: 81  MVARPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKK 140

Query: 248 --------------TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV-----QNGCSP 288
                          LG + +V ++T+L+ G     R   A +L   M+     + G  P
Sbjct: 141 RTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPP 200

Query: 289 NVVTYTSLIKGFM-EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
           +VV+Y ++I G + E +    A+   D +  +G +PD+V +N +I  LSK  + D A  V
Sbjct: 201 DVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVV 260

Query: 348 YDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCK 404
              +++   +P+  T  SLL   C SG+ +    + K +C   VE D+  YN L+ Y CK
Sbjct: 261 LVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCK 320

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV 464
            G   +A K++++M+ +G  P++ ++  LL G      + +  ++   +V N    + ++
Sbjct: 321 NGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYI 380

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
              ++    + G+   A+ LF +   +    D V+Y + +  L   G+ ++A   + ++ 
Sbjct: 381 FNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLI 440

Query: 525 HIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
              + P+A  +R ++   C        + L  ++I
Sbjct: 441 SEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMI 475



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 84/389 (21%), Positives = 167/389 (42%), Gaps = 74/389 (19%)

Query: 135 YGMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVD-------------------- 171
           +G V +A   F +M R G  P+T    IVMD L  +G+VD                    
Sbjct: 391 HGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVV 450

Query: 172 -------------------LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
                              L ++++     PN + FN  L +LCK   V+  K++  +MV
Sbjct: 451 FRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMV 510

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
           R     +V  +  L++ +C  G++ EA +LL  M+  G   +   +  +I+G+ +  R++
Sbjct: 511 RVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIE 570

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A  L+ +M   G +P +VTY+++++G  +A+  + A      +   G   D+  +N+++
Sbjct: 571 DAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIIL 630

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADL 392
             L +    DDAL ++  L  +    ++ TF                             
Sbjct: 631 LGLCQNNCTDDALRIFQNLYLIDFHLENRTF----------------------------- 661

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
              N ++    K G  ++A  L+ ++L +G  P+  ++  +++ L     ++E  +++  
Sbjct: 662 ---NIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLS 718

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
           +  N    N+ +  A+V +L++ G   KA
Sbjct: 719 LEKNGCTANSRMLNALVGKLLQKGEVRKA 747



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/227 (23%), Positives = 99/227 (43%), Gaps = 7/227 (3%)

Query: 382 LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
           +V   +V  +L+ Y+ ++    + G  + A      ++  G+T +  +F  LL+ LC  +
Sbjct: 81  MVARPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKK 140

Query: 442 KIDEAINV-YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK-----YPL 495
           +  EA+++  + + +     N   +T ++  L +  R  +A+ L    +V       YP 
Sbjct: 141 RTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPP 200

Query: 496 DVVSYTVAIRGLLEGGRT-EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
           DVVSY   I GLL  GR  + AY L+ QM    + P+  TY  ++ +  K R +     +
Sbjct: 201 DVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVV 260

Query: 555 LQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           L  ++      +  T   L          + A+     MC  G+ PD
Sbjct: 261 LVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPD 307


>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g41170, mitochondrial; Flags: Precursor
 gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
 gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 527

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/438 (23%), Positives = 211/438 (48%), Gaps = 6/438 (1%)

Query: 170 VDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
           +DL   +++   LP+ + F   L  + K+     V ++   +   G   ++    +L+NC
Sbjct: 57  LDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNC 116

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
           FC+  +   A   LG M+ LG    +  +T LI+GF    R++ A  +  +MV+ G  P+
Sbjct: 117 FCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPD 176

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
           VV YT++I    +    + A S  D +E+ G  PD+V +  L++ L   G + DA  +  
Sbjct: 177 VVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLR 236

Query: 350 GLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAG 406
           G+ + K+ PD  TF +L+      G+F    +L   +  + +  ++  Y +L++ FC  G
Sbjct: 237 GMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEG 296

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
             ++A +++  M  KG  PD  ++  L+ G C  +K+D+A+ ++  +       N   +T
Sbjct: 297 CVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYT 356

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKH- 525
            ++    + G+ + A ++F   +    P ++ +Y V +  L   G+ ++A +++  M+  
Sbjct: 357 TLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKR 416

Query: 526 --IAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSS 583
               V PN +TY V+L   C    ++    + +D+    +++   T   + + + K    
Sbjct: 417 EMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKV 476

Query: 584 SSAVNQLVEMCNLGLIPD 601
            +AVN    + + G+ P+
Sbjct: 477 KNAVNLFCSLPSKGVKPN 494



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 107/428 (25%), Positives = 206/428 (48%), Gaps = 16/428 (3%)

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCN 194
           +   L+ F  M      P+      +++V+ K+ + D+ I +    Q+   +S ++  CN
Sbjct: 53  FNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMG-VSHDLYTCN 111

Query: 195 L-----CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
           L     C+ +        +G M++ GF P++  F  L+N FC   R+ EA  ++  M+ +
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           G    V  +T +ID   +   ++ A  L+++M   G  P+VV YTSL+ G   +  +  A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
            S L  +      PD++  N LID   K G + DA ++Y+ ++ + + P+ +T+ SL++ 
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291

Query: 370 VCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
            C+ G      ++   +E +    D+V Y +L++ FCK    + A+K++  M  KG T +
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
             ++  L++G     K + A  V+  +V      N   +  ++  L   G+  KA+ +F 
Sbjct: 352 TITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFE 411

Query: 487 RAIVEKYPLDVV-----SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
              ++K  +D V     +Y V + GL   G+ E+A +++  M+   +     TY +++  
Sbjct: 412 D--MQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQG 469

Query: 542 FCKERNIK 549
            CK   +K
Sbjct: 470 MCKAGKVK 477



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 116/480 (24%), Positives = 217/480 (45%), Gaps = 26/480 (5%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
           AL  F    + R     +  F  +++V+ ++  +F+ V  +   L  +G      T  L 
Sbjct: 56  ALDLFTHMVESRP-LPSIIDFTKLLNVIAKMK-KFDVVINLCDHLQIMGVSHDLYTCNLL 113

Query: 126 LRIYWRGEMYGMVLEAFDEMGRFGFTPN--TFAR--------NIVMDVLFKIGR-VDLGI 174
           +  + +     +      +M + GF P+  TF          N + + +  + + V++GI
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173

Query: 175 KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
           K       P+ + +   + +LCK   V+    +   M   G  P+V M+  L+N  C  G
Sbjct: 174 K-------PDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSG 226

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
           R  +A  LL  M        V  +  LID F +  +   A  L+ +M++   +PN+ TYT
Sbjct: 227 RWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYT 286

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
           SLI GF        A     ++E++G  PD+V +  LI+   K    DDA+ ++  + + 
Sbjct: 287 SLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQK 346

Query: 355 KLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQA 411
            L  ++ T+ +L+      G+ ++  ++   +    V  ++  YN LL   C  G   +A
Sbjct: 347 GLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKA 406

Query: 412 VKLYNTMLDK---GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAI 468
           + ++  M  +   G  P+ +++  LL GLC   K+++A+ V++ +      +    +T I
Sbjct: 407 LMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTII 466

Query: 469 VDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAV 528
           +  + +AG+   A+ LF     +    +VV+YT  I GL   G   EA++L+ +MK   V
Sbjct: 467 IQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 142/297 (47%), Gaps = 6/297 (2%)

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
           N   +L +G   L+  + A  L+  MV++   P+++ +T L+    + K F +  +  D 
Sbjct: 39  NYREILRNGLHSLQ-FNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDH 97

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
           L+  G + DL   N+L++C  +      A      +++L   PD  TF SL++  CL  R
Sbjct: 98  LQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNR 157

Query: 376 F----SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
                S++ ++V  + ++ D+V+Y  ++   CK G  N A+ L++ M + G  PD   + 
Sbjct: 158 MEEAMSMVNQMV-EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYT 216

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            L+ GLC + +  +A ++ +G+       +     A++D  ++ G+   A +L+   I  
Sbjct: 217 SLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRM 276

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
               ++ +YT  I G    G  +EA  ++  M+     P+   Y  ++  FCK + +
Sbjct: 277 SIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKV 333



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/158 (20%), Positives = 70/158 (44%)

Query: 409 NQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAI 468
           N+A+ L+  M++    P    F  LL  +   +K D  IN+   + +   + + +    +
Sbjct: 54  NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113

Query: 469 VDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAV 528
           ++   ++ + + A     + +   +  D+V++T  I G   G R EEA  + +QM  + +
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173

Query: 529 PPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
            P+   Y  ++ S CK  ++     L   + +  I  D
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPD 211



 Score = 46.6 bits (109), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 61/302 (20%), Positives = 125/302 (41%), Gaps = 19/302 (6%)

Query: 3   WRCKRSLFYTAQRTQILKTIISFKSIHQ--ISSPKVCATT---HQDFPIILAPHI-VHST 56
           WR   SL     + +I   +I+F ++    +   K        ++   + +AP+I  +++
Sbjct: 228 WRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTS 287

Query: 57  LLN--CPSDLI--ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELAR 112
           L+N  C    +  A   F +  + +  F DV ++  +I+   +   + +    I  E+++
Sbjct: 288 LINGFCMEGCVDEARQMF-YLMETKGCFPDVVAYTSLINGFCKCK-KVDDAMKIFYEMSQ 345

Query: 113 VGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDL 172
            G      T+   ++ + +     +  E F  M   G  PN    N+++  L   G+V  
Sbjct: 346 KGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKK 405

Query: 173 GIKVLKETQ-------LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEI 225
            + + ++ Q        PN  ++N+ L  LC    +     V   M ++     +  + I
Sbjct: 406 ALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTI 465

Query: 226 LLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
           ++   CK G++  A  L   + + G   +V  +T +I G  R      A  L+ KM ++G
Sbjct: 466 IIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525

Query: 286 CS 287
            S
Sbjct: 526 VS 527


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/435 (26%), Positives = 199/435 (45%), Gaps = 26/435 (5%)

Query: 152 PNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDV 207
           PN    + ++D L K GR     +L I++  +   PN +++N  +   C     S  + +
Sbjct: 251 PNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRL 310

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
           +  M+ +   PNV  +  L+N F K G+  EA +L   M+  G   +   +  +IDGF +
Sbjct: 311 LQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK 370

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
             RLD A  ++  M   GCSP+V T+T+LI G+  AK        L  +   G   + V 
Sbjct: 371 QDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVT 430

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-------FSLLP 380
           +N LI     +G  + ALD+   ++   + PD  T  +LL  +C +G+       F  + 
Sbjct: 431 YNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQ 490

Query: 381 KLVCGLE-------VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
           K    L+       VE D++ YN L+      G   +A +LY  M  +G  PD  ++  +
Sbjct: 491 KSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 550

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF----RRAI 489
           + GLC   ++DEA  ++  +   + + N      +++   +AGR    ++LF    RR I
Sbjct: 551 IDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGI 610

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
           V     D + Y   I G  + G    A  ++ +M    V P+  T R ML  F  +  ++
Sbjct: 611 VA----DAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELE 666

Query: 550 MVKRLLQDVIDARIE 564
               +L+D+   ++E
Sbjct: 667 RAVAMLEDLQRYQLE 681



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 129/578 (22%), Positives = 247/578 (42%), Gaps = 46/578 (7%)

Query: 83  VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF 142
           V  F+ ++  V R+  R + V  +  ++ R        +F + ++ +         L  F
Sbjct: 81  VIDFNKLMGAVVRME-RPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTF 139

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVS 202
            ++ + G  P+      ++  L    RV   + +  +   P+ L+F   +  LC+   V 
Sbjct: 140 GKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRPDVLTFTTLMNGLCREGRVV 199

Query: 203 NVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG-TSLSVNAWTVL 261
               ++  MV  G  P+   +   ++  CKMG    A  LL  M  +     +V  ++ +
Sbjct: 200 EAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAI 259

Query: 262 IDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH 321
           IDG  +  R   +  L+ +M   G  PN+VTY  +I GF  +  +S A   L  +     
Sbjct: 260 IDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKI 319

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPK 381
           +P++V +N LI+   K G + +A ++YD +L   ++P++ T+ S++   C   R      
Sbjct: 320 SPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAED 379

Query: 382 ---LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
              L+       D+  +  L+  +C A   +  ++L + M  +G   +  ++  L+ G C
Sbjct: 380 MFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFC 439

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL--- 495
               ++ A+++ Q ++ +    +      ++D L + G+   A+++F+     K  L   
Sbjct: 440 LVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDAS 499

Query: 496 --------DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN 547
                   DV++Y + I GL+  G+  EA  LY +M H  + P+  TY  M+   CK+  
Sbjct: 500 HPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS- 558

Query: 548 IKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVE-MCNLGLIPD----- 601
                            LD  T + ++     F  +    N L+   C  G + D     
Sbjct: 559 ----------------RLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELF 602

Query: 602 -EMWRKLGLLSDETMTPVSLFDGFVPCERRAGNANHLL 638
            EM R+ G+++D  +  ++L  GF    R+ GN N  L
Sbjct: 603 CEMGRR-GIVADAIIY-ITLIYGF----RKVGNINGAL 634



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 113/472 (23%), Positives = 210/472 (44%), Gaps = 25/472 (5%)

Query: 136 GMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ-----LPNFLS 187
           G V+EA    D M   G  P+       +D + K+G     + +L++ +      PN + 
Sbjct: 196 GRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVI 255

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           ++  +  LCK    S+  ++   M  KG +PN+  +  ++  FC  GR + A +LL  M+
Sbjct: 256 YSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEML 315

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
               S +V  +  LI+ F +  +   A  L+++M+  G  PN +TY S+I GF +     
Sbjct: 316 ERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLD 375

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A     ++ ++G +PD+     LID        DD +++   +    LV ++ T+ +L+
Sbjct: 376 AAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLI 435

Query: 368 STVCLSGRFSL---LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM------ 418
              CL G  +    L + +    V  D+V  N LL   C  G    A++++  M      
Sbjct: 436 HGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMD 495

Query: 419 LD-----KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
           LD      G  PD  ++  L+ GL    K  EA  +Y+ +       +   +++++D L 
Sbjct: 496 LDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 555

Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
           +  R  +A Q+F     + +  +VV++   I G  + GR ++   L+ +M    +  +A 
Sbjct: 556 KQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAI 615

Query: 534 TYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSS 585
            Y  ++  F K  NI     + Q++I + +   Y  +I +   +  F S   
Sbjct: 616 IYITLIYGFRKVGNINGALDIFQEMISSGV---YPDTITIRNMLTGFWSKEE 664



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 134/297 (45%), Gaps = 8/297 (2%)

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           G SL + + +  I G      L+ A  L+  M+++   P+V+ +  L+   +  +   + 
Sbjct: 47  GESLKLRSGSYEIKG------LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLV 100

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
            S    +E +    D+    +LI C         AL  +  L +L L PD  TF +LL  
Sbjct: 101 ISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHG 160

Query: 370 VCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
           +CL  R S    L   +    D++ +  L++  C+ G   +AV L + M++ G  PD  +
Sbjct: 161 LCLDHRVSEALDLFHQI-CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQIT 219

Query: 430 FVGLLRGLCGARKIDEAINVYQGI-VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
           +   + G+C       A+N+ + +  +++   N  +++AI+D L + GR   +  LF   
Sbjct: 220 YGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEM 279

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
             +    ++V+Y   I G    GR   A  L  +M    + PN  TY  ++ +F KE
Sbjct: 280 QDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKE 336



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 136/309 (44%), Gaps = 14/309 (4%)

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
           SV  +  L+    R+ R D+   L++KM +     ++ ++T LIK F        A S  
Sbjct: 80  SVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTF 139

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
             L   G  PD+V    L+  L       +ALD++  +      PD  TF +L++ +C  
Sbjct: 140 GKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR----PDVLTFTTLMNGLCRE 195

Query: 374 GR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD-KGFTPDNY 428
           GR     +LL ++V    ++ D + Y   +   CK G    A+ L   M +     P+  
Sbjct: 196 GRVVEAVALLDRMVEN-GLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVV 254

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAV--NAHVHTAIVDRLIEAGRCHKAIQLFR 486
            +  ++ GLC   +  ++ N++  I M +  +  N   +  ++     +GR   A +L +
Sbjct: 255 IYSAIIDGLCKDGRHSDSHNLF--IEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQ 312

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
             +  K   +VV+Y   I   ++ G+  EA  LY +M    + PN  TY  M+  FCK+ 
Sbjct: 313 EMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQD 372

Query: 547 NIKMVKRLL 555
            +   + + 
Sbjct: 373 RLDAAEDMF 381


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/452 (24%), Positives = 201/452 (44%), Gaps = 33/452 (7%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-PNFLSFNIALCNLCKLNDVSNVKDV 207
           G  P+    N+++    K G +D  ++VL    + P+ +++N  L  LC    +    +V
Sbjct: 179 GAVPDVITYNVLISGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEV 238

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
           +   ++K  YP+V  + IL+   CK   + +A +LL  M   G+   V  + VLI+G  +
Sbjct: 239 LDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICK 298

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
             RLD A      M   GC PNV+T+  +++       +  A   L  +  +G +P +V 
Sbjct: 299 EGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVT 358

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE 387
            N+LI+ L + G    A+D+ + +      P+S +                         
Sbjct: 359 FNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLS------------------------- 393

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
                  YN LL  FCK    ++A++  + M+ +G  PD  ++  LL  LC   K+D A+
Sbjct: 394 -------YNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAV 446

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            +   +     +     +  ++D L + G+  +AI+L      +    D+++Y+  + GL
Sbjct: 447 EILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGL 506

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
              G+ +EA   +  ++ + + PNA TY  ++L  CK R        L  +I  R +   
Sbjct: 507 SREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTE 566

Query: 568 HTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLI 599
            T   L + I     +  A++ L E+C+ GL+
Sbjct: 567 ATYTILIEGIAYEGLAKEALDLLNELCSRGLV 598



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 92/360 (25%), Positives = 175/360 (48%), Gaps = 7/360 (1%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           +G+ +    ++    +  C     T+ + +    +    G  ++  DEM   G  P+   
Sbjct: 229 SGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVT 288

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N++++ + K GR+D  IK L         PN ++ NI L ++C      + + ++  M+
Sbjct: 289 YNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDML 348

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
           RKG  P+V  F IL+N  C+ G +  A  +L  M   G + +  ++  L+ GF + +++D
Sbjct: 349 RKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMD 408

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A    + MV  GC P++VTY +L+    +     +A   L+ L S+G +P L+ +N +I
Sbjct: 409 RAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVI 468

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVE 389
           D LSK+G  + A+ + D +    L PD  T+ SL+S +   G+     K    + GL + 
Sbjct: 469 DGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIR 528

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            + + YN+++   CK+   ++A+     M+ K   P   ++  L+ G+       EA+++
Sbjct: 529 PNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDL 588



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 135/290 (46%), Gaps = 12/290 (4%)

Query: 268 LRRLDMAGYL------WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH 321
           LRRL   G L       E MV  G  P+++  TSLI+GF        A   +++LE  G 
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 180

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPK 381
            PD++ +NVLI    K G  D+AL V D    + + PD  T+ ++L T+C SG+     +
Sbjct: 181 VPDVITYNVLISGYCKSGEIDNALQVLD---RMNVAPDVVTYNTILRTLCDSGKLKQAME 237

Query: 382 LV---CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
           ++      E   D++ Y  L+   CK     QA+KL + M +KG  PD  ++  L+ G+C
Sbjct: 238 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 297

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
              ++DEAI     +       N   H  I+  +   GR   A +L    + +     VV
Sbjct: 298 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV 357

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
           ++ + I  L   G    A  +  +M      PN+ +Y  +L  FCKE+ +
Sbjct: 358 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKM 407



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 99/445 (22%), Positives = 193/445 (43%), Gaps = 45/445 (10%)

Query: 164 LFKIGRVDLGIKVLKET----QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN 219
           L + G ++ G K L+       +P+ +     +   C++        V+ ++ + G  P+
Sbjct: 124 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 183

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
           V  + +L++ +CK G I  A Q+L  M     +  V  +  ++       +L  A  + +
Sbjct: 184 VITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLD 240

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
           + +Q  C P+V+TYT LI+   +      A   LD + ++G  PD+V +NVLI+ + K G
Sbjct: 241 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 300

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYN 396
             D+A+   + +      P+  T   +L ++C +GR+    KL+  +        +V +N
Sbjct: 301 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 360

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            L+++ C+ G   +A+ +   M   G TP++ S+  LL G C  +K+D AI         
Sbjct: 361 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEY------- 413

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
                       +D ++  G C              YP D+V+Y   +  L + G+ + A
Sbjct: 414 ------------LDIMVSRG-C--------------YP-DIVTYNTLLTALCKDGKVDVA 445

Query: 517 YILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKF 576
             + +Q+      P   TY  ++    K    +   +LL ++    ++ D  T   L   
Sbjct: 446 VEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSG 505

Query: 577 IFKFHSSSSAVNQLVEMCNLGLIPD 601
           + +      A+    ++  LG+ P+
Sbjct: 506 LSREGKVDEAIKFFHDLEGLGIRPN 530



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 123/268 (45%), Gaps = 4/268 (1%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           TGR+     ++ ++ R GC     TF + +    R  + G  ++  ++M   G TPN+ +
Sbjct: 334 TGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLS 393

Query: 157 RNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N ++    K  ++D  I+ L         P+ +++N  L  LCK   V    +++  + 
Sbjct: 394 YNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLS 453

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
            KG  P +  +  +++   K+G+   A +LL  M   G    +  ++ L+ G  R  ++D
Sbjct: 454 SKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVD 513

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A   +  +   G  PN +TY S++ G  +++    A  FL  + S+   P    + +LI
Sbjct: 514 EAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILI 573

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDS 360
           + ++  G   +ALD+ + L    LV  S
Sbjct: 574 EGIAYEGLAKEALDLLNELCSRGLVKKS 601



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/203 (22%), Positives = 84/203 (41%), Gaps = 3/203 (1%)

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           L    + G      K   +M+ +G  PD      L+RG C   K  +A  V + +  +  
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 180

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
             +   +  ++    ++G    A+Q+  R  V     DVV+Y   +R L + G+ ++A  
Sbjct: 181 VPDVITYNVLISGYCKSGEIDNALQVLDRMNVAP---DVVTYNTILRTLCDSGKLKQAME 237

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
           +  +       P+  TY +++ + CKE  +    +LL ++ +   + D  T   L   I 
Sbjct: 238 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 297

Query: 579 KFHSSSSAVNQLVEMCNLGLIPD 601
           K      A+  L  M + G  P+
Sbjct: 298 KEGRLDEAIKFLNNMPSYGCQPN 320


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 123/531 (23%), Positives = 237/531 (44%), Gaps = 9/531 (1%)

Query: 77  RDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLR-IYWRGEMY 135
           +D+  D   FD    V+    G     R    +L   G  + A +  L+L  +  + +M 
Sbjct: 33  KDWGSDPHVFDVFFQVLVE-AGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDML 91

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIA 191
           GMVL+ F E  + G   NT + NI+M+ LF++G++     +L   +    +P+ +S+   
Sbjct: 92  GMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTI 151

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           +   C + ++  V  ++  M  KG  PN+  +  ++   CK G++ E  ++L  M+  G 
Sbjct: 152 IDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGV 211

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
                 +T LIDGF +L     A  L+ +M      P+ + +++LI G   +     A  
Sbjct: 212 FPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADK 271

Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
             + +  +G  PD V +  LID   K+G    A  +++ ++++ L P+  T+ +L   +C
Sbjct: 272 LFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLC 331

Query: 372 LSGRFSLLPKLV---CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
            SG      +L+   C   ++ ++  YN +++  CKAG   QAVKL   M + G  PD  
Sbjct: 332 KSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTI 391

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
           ++  L+       ++ +A  + + ++             +++ L  +G+     +L +  
Sbjct: 392 TYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWM 451

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
           + +    +  +Y   ++          +  +Y  M    V P++ TY +++   CK RN+
Sbjct: 452 LEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNM 511

Query: 549 KMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLI 599
           K    L +++++ R  L   +   L K  FK      A     EM   GL+
Sbjct: 512 KEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLV 562



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 95/391 (24%), Positives = 170/391 (43%), Gaps = 4/391 (1%)

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR-LD 272
           K +  +  +F++      + G + EA +    ++  G +LS  +  + +      R  L 
Sbjct: 33  KDWGSDPHVFDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLG 92

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
           M   ++ +  Q G   N  +Y  L+           A   L  +E +G  PD+V +  +I
Sbjct: 93  MVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTII 152

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVE 389
           D    +G     + +   +    L P+ YT+ S++  +C SG+     K++  +    V 
Sbjct: 153 DGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVF 212

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            D V+Y  L+  FCK G    A KL++ M  +   PD+ +F  L+ GL G+ K+ EA  +
Sbjct: 213 PDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKL 272

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
           +  ++      +   +TA++D   + G   KA  L  + +      +VV+YT    GL +
Sbjct: 273 FNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCK 332

Query: 510 GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
            G  + A  L  +M    +  N  TY  ++   CK  NI    +L++++ +A +  D  T
Sbjct: 333 SGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTIT 392

Query: 570 SIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
              L    +K      A   L EM + GL P
Sbjct: 393 YTTLMDAYYKTGEMVKARELLREMLDRGLQP 423



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/264 (21%), Positives = 118/264 (44%), Gaps = 10/264 (3%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA---FDEMGRFGFTPN 153
           +G  +T   ++ E+ R G  +   T+   +    +    G +L+A    +EM   G  P+
Sbjct: 333 SGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKA---GNILQAVKLMEEMKEAGLHPD 389

Query: 154 TFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIG 209
           T     +MD  +K G +    ++L+E       P  ++FN+ +  LC    + + + ++ 
Sbjct: 390 TITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLK 449

Query: 210 MMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLR 269
            M+ KG  PN   +  ++  +C    +  + ++   M   G     N + +LI G  + R
Sbjct: 450 WMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKAR 509

Query: 270 RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHN 329
            +  A +L ++MV+   +    +Y +LIKGF + K    A    + +  EG       +N
Sbjct: 510 NMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYN 569

Query: 330 VLIDCLSKMGSYDDALDVYDGLLE 353
           + +D   + G+ +  L++ D  +E
Sbjct: 570 LFVDMNYEEGNMETTLELCDEAIE 593



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/215 (22%), Positives = 90/215 (41%), Gaps = 1/215 (0%)

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK-IDEAIN 448
           +D  V++       +AG  N+A K ++ +L+ G      S    L  L   R  +   + 
Sbjct: 37  SDPHVFDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLK 96

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           V+          N   +  +++ L   G+  +A  L  R   +    DVVSYT  I G  
Sbjct: 97  VFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYC 156

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
             G  ++   L  +M+   + PN YTY  ++L  CK   +   +++L++++   +  D+ 
Sbjct: 157 HVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHV 216

Query: 569 TSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
               L     K  ++ +A     EM    ++PD +
Sbjct: 217 IYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSI 251


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 140/574 (24%), Positives = 240/574 (41%), Gaps = 90/574 (15%)

Query: 44  FPIILAPHIVHSTLLNCPSD-LIALSFFIWCAKQRDYFHDVQSFDHMISVVTR---LTGR 99
           F   LAP  V   LL    D  +AL FF W   Q  + H  +S+  ++ +V R    T  
Sbjct: 64  FDSALAPIWVSKILLGLREDPKLALKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDA 123

Query: 100 FETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNI 159
            +TV+ ++                    +  R +M   V   FD +           RNI
Sbjct: 124 HDTVKEVI--------------------MNSRMDMGFPVCNIFDMLWS--------TRNI 155

Query: 160 ------VMDVLFKIGRVDLGIKVLKETQ-----------LPNFLSFNIALCNLCKLNDVS 202
                 V DVLF +  V+LG+  L+E             LP   S N  L  L K  +  
Sbjct: 156 CVSGSGVFDVLFSV-FVELGL--LEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQ 212

Query: 203 NVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLI 262
            V+     M+  G  P+V  + ++++  CK G +  + +L   M  +G S  V  +  LI
Sbjct: 213 LVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLI 272

Query: 263 DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
           DG+ ++  L+    L+ +M   GC P+++TY  LI  + + +    AF +   +++ G  
Sbjct: 273 DGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLK 332

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL 382
           P++V ++ LID   K G    A+ +   +    L+P+ +T+ SL+   C +G  +   KL
Sbjct: 333 PNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKL 392

Query: 383 VCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL-- 437
           +  +    V+ ++V Y ALL   CKAG   +A +++ +ML  G +P+   +  L+ G   
Sbjct: 393 LNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIK 452

Query: 438 ---------------------------------CGARKIDEAINVYQGIVMNNPAVNAHV 464
                                            C  RK++E   + + +     + N  +
Sbjct: 453 AERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVI 512

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
            T I+D   +AG+   A+  F+          +V+Y V I GL E G  E A   + +M 
Sbjct: 513 STTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRML 572

Query: 525 HIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
            + + PN   Y  ++   C    I+  K+L  ++
Sbjct: 573 SLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEM 606



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 110/453 (24%), Positives = 209/453 (46%), Gaps = 8/453 (1%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV +++ +I    ++ G  E V  +  E+  VGCV    T+   +  Y + E      E 
Sbjct: 264 DVVTYNSLIDGYGKV-GSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEY 322

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           F EM   G  PN    + ++D   K G +   IK+L + +    LPN  ++   +   CK
Sbjct: 323 FSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCK 382

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
             +++    ++  M++ G   N+  +  LL+  CK GR+ EA ++   M+  G S +   
Sbjct: 383 AGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQV 442

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T L+ G+ +  R++ A  + ++M +    P+++ Y S+I G    +        L+ ++
Sbjct: 443 YTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMK 502

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
           S G + + V    +ID   K G   DAL+ +  + ++ +     T+C L+  +C +G   
Sbjct: 503 SRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVE 562

Query: 378 LLPKLVC---GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
           L     C    L ++ ++ VY +L+   C       A KL++ M  +G TPD  +F  L+
Sbjct: 563 LAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALI 622

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            G      + EA+ +   +       + HV+T++V    + G  H+A + F   I +   
Sbjct: 623 DGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGIL 682

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIA 527
            + V     +R   + G+ +EA  L ++M+ +A
Sbjct: 683 PEEVLCICLLREYYKRGQLDEAIELKNEMERMA 715



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/430 (23%), Positives = 195/430 (45%), Gaps = 9/430 (2%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           F +M   G +P+    N ++D   K+G ++    +  E +    +P+ +++N  +   CK
Sbjct: 253 FVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCK 312

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              +    +    M   G  PNV  +  L++ FCK G +  A +LL  M   G   +   
Sbjct: 313 FEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFT 372

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA-KMFSIAFSFLDML 316
           +T LID   +   L  A  L   M+Q G   N+VTYT+L+ G  +A +M      F  ML
Sbjct: 373 YTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSML 432

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
           + +G +P+   +  L+    K    +DA+ +   + E  + PD   + S++   C   + 
Sbjct: 433 K-DGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKL 491

Query: 377 S---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
               L+ + +    + A+ V+   ++  + KAG  + A+  +  M D G      ++  L
Sbjct: 492 EETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVL 551

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           + GLC A  ++ A++ +  ++      N  V+T+++D L        A +LF        
Sbjct: 552 IDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGM 611

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
             D+ ++T  I G L+ G  +EA +L S+M  +A+  + + Y  ++  F +   +   ++
Sbjct: 612 TPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARK 671

Query: 554 LLQDVIDARI 563
              ++I+  I
Sbjct: 672 FFNEMIEKGI 681



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 55/277 (19%), Positives = 119/277 (42%), Gaps = 3/277 (1%)

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCG 385
           +VL     ++G  ++A + +  +   + +P + +   LL  +  SG   L+ K    + G
Sbjct: 164 DVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIG 223

Query: 386 LEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
             +   +  YN ++ Y CK G    + +L+  M + G +PD  ++  L+ G      ++E
Sbjct: 224 AGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEE 283

Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
             +++  +       +   +  +++   +  +  +A + F          +VV+Y+  I 
Sbjct: 284 VASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLID 343

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
              + G  + A  L   M+   + PN +TY  ++ + CK  N+    +LL D++ A ++L
Sbjct: 344 AFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKL 403

Query: 566 DYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
           +  T   L   + K      A      M   G+ P++
Sbjct: 404 NIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQ 440


>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 689

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 135/570 (23%), Positives = 239/570 (41%), Gaps = 52/570 (9%)

Query: 44  FPIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETV 103
           FP  L+P  V   L +  +   A + F    +   Y H    + H++  ++    R  T 
Sbjct: 4   FPKSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSE--ARMVTH 61

Query: 104 RGIVGELARVG-CVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGR-FGFTPNTFARNIVM 161
            G + EL R   C       L  ++ Y +  M    L+ F  M   FG  P   + N ++
Sbjct: 62  VGRIVELIRSQECKCDEDVALSVIKTYGKNSMPDRALDVFKRMREIFGCEPGIRSYNTLL 121

Query: 162 DVLFKIGRVDLGIKVLK-----ETQ--LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
           +   +  +    +KV       ET    PN  ++N+ +   CK  +    +  +  M ++
Sbjct: 122 NAFVEAKQ---WVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKE 178

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           GF P+V  +  ++N   K G++ +A +L   M     +  V  + +LIDGF + +   MA
Sbjct: 179 GFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMA 238

Query: 275 GYLWEKMVQNGCS-PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
             LW+K++++    PNV T+  +I G  +           D ++      DL  ++ LI 
Sbjct: 239 MQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIH 298

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV--EAD 391
            L   G+ D A  V++ L+E K   D  T+ ++L   C  G+     +L   +E     +
Sbjct: 299 GLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRNSVN 358

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN------------------------ 427
           +V YN L+    + G  ++A  ++  M  KG+  DN                        
Sbjct: 359 IVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQ 418

Query: 428 -----------YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
                      Y++  ++  LC  R+++EA N+ + +  +   +N+HV  A++  LI   
Sbjct: 419 EVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDS 478

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
           R   A  L R          VVSY + I GL E G+  EA     +M    + P+  TY 
Sbjct: 479 RLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYS 538

Query: 537 VMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           ++L   C++R I++   L    + + +E D
Sbjct: 539 ILLGGLCRDRKIELALELWHQFLQSGLEPD 568



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/486 (21%), Positives = 217/486 (44%), Gaps = 11/486 (2%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
           A  F  W  K+  +  DV S+  +I+ + + TG+ +    +  E++          + + 
Sbjct: 168 ARGFLNWMWKE-GFKPDVFSYSTVINDLAK-TGKLDDALELFDEMSERRVAPDVTCYNIL 225

Query: 126 LRIYWRGEMYGMVLEAFDEM-GRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KET 180
           +  + + + + M ++ +D++       PN    NI++  L K GRVD  +K+     +  
Sbjct: 226 IDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNE 285

Query: 181 QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAY 240
           +  +  +++  +  LC   +V   + V   +V +  + +V  +  +L  FC+ G+I E+ 
Sbjct: 286 REKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESL 345

Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
           +L  +M     S+++ ++ +LI G     ++D A  +W  M   G + +  TY   I G 
Sbjct: 346 ELWRIM-EQRNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGL 404

Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
                 + A   +  +ES+G   D+  +  +IDCL K    ++A ++   + +  +  +S
Sbjct: 405 CVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNS 464

Query: 361 YTFCSLLSTVCLSGRFSLLPKLVCGLEVEADL---VVYNALLSYFCKAGFPNQAVKLYNT 417
           +   +L+  +    R S    L+ G+     L   V YN L+   C+AG   +A      
Sbjct: 465 HVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKE 524

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           ML+ G  PD  ++  LL GLC  RKI+ A+ ++   + +    +  +H  ++  L   G+
Sbjct: 525 MLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGK 584

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
              A+ +           ++V+Y   + G  +   +  A +++  M  + + P+  +Y  
Sbjct: 585 LDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNT 644

Query: 538 MLLSFC 543
           +L   C
Sbjct: 645 ILKGLC 650



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/380 (23%), Positives = 175/380 (46%), Gaps = 8/380 (2%)

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
            G    + ++  L++ F   ++      L+      G +PN+ TY  LIK   + K F  
Sbjct: 108 FGCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEK 167

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A  FL+ +  EG  PD+  ++ +I+ L+K G  DDAL+++D + E ++ PD   +  L+ 
Sbjct: 168 ARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILID 227

Query: 369 TVCLSG----RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
                        L  KL+    V  ++  +N ++S   K G  +  +K+++ M      
Sbjct: 228 GFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNERE 287

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
            D Y++  L+ GLC    +D+A +V+  +V     ++   +  ++      G+  ++++L
Sbjct: 288 KDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLEL 347

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
           + R + ++  +++VSY + I+GLLE G+ +EA +++  M       +  TY + +   C 
Sbjct: 348 W-RIMEQRNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCV 406

Query: 545 ERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGL-IPDEM 603
              +     ++Q+V      LD +    +   + K      A N + EM   G+ +   +
Sbjct: 407 NGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHV 466

Query: 604 WRKL--GLLSDETMTPVSLF 621
              L  GL+ D  ++  SL 
Sbjct: 467 CNALIGGLIRDSRLSDASLL 486



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 105/416 (25%), Positives = 181/416 (43%), Gaps = 12/416 (2%)

Query: 44  FPIILAPHIVHSTLLNCPSDLIALSFFIWC-AKQRDYFHDVQSFDHMISVVTRLTGRFET 102
           +P +   +I+ S L  C    +     IW   KQ +   D+ ++  +I  +    G  + 
Sbjct: 252 YPNVKTHNIMISGLSKCGR--VDDCLKIWDRMKQNEREKDLYTYSSLIHGLCD-EGNVDK 308

Query: 103 VRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMD 162
              +  EL      I   T+   L  + R       LE +  M +   + N  + NI++ 
Sbjct: 309 AESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRN-SVNIVSYNILIK 367

Query: 163 VLFKIGRVDLGIKVLKETQLPNF----LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYP 218
            L + G++D    + +      +     ++ I +  LC    V+    V+  +  KG + 
Sbjct: 368 GLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHL 427

Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
           +V  +  +++C CK  R+ EA  L+  M   G  L+ +    LI G  R  RL  A  L 
Sbjct: 428 DVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLM 487

Query: 279 EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
             M +NGC P VV+Y  LI G  EA  F  A +F+  +   G  PDL  +++L+  L + 
Sbjct: 488 RGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRD 547

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVY 395
              + AL+++   L+  L PD      L+  +C  G+      ++  +E     A+LV Y
Sbjct: 548 RKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTY 607

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
           N L+  + K    N+A  ++  M   G  PD  S+  +L+GLC   ++  AI  + 
Sbjct: 608 NTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFD 663



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 104/474 (21%), Positives = 201/474 (42%), Gaps = 10/474 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           ++Q+++ +I +  +    FE  RG +  + + G      ++   +    +       LE 
Sbjct: 148 NLQTYNVLIKMSCK-KKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALEL 206

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQL-PNFLSFNIALCNLC 196
           FDEM      P+    NI++D   K     + +    K+L+++ + PN  + NI +  L 
Sbjct: 207 FDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLS 266

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
           K   V +   +   M +     ++  +  L++  C  G + +A  +   ++     + V 
Sbjct: 267 KCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVV 326

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
            +  ++ GF R  ++  +  LW  M Q   S N+V+Y  LIKG +E      A     ++
Sbjct: 327 TYNTMLGGFCRCGKIKESLELWRIMEQRN-SVNIVSYNILIKGLLENGKIDEATMIWRLM 385

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
            ++G+A D   + + I  L   G  + AL V   +       D Y + S++  +C   R 
Sbjct: 386 PAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRL 445

Query: 377 SLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
                LV  +    VE +  V NAL+    +    + A  L   M   G  P   S+  L
Sbjct: 446 EEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNIL 505

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           + GLC A K  EA    + ++ N    +   ++ ++  L    +   A++L+ + +    
Sbjct: 506 ICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGL 565

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN 547
             DV+ + + I GL   G+ ++A  + + M+H     N  TY  ++  + K R+
Sbjct: 566 EPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRD 619



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 8/233 (3%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCKLN 199
           EM + G   N+   N ++  L +  R+     ++    K   LP  +S+NI +C LC+  
Sbjct: 454 EMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAG 513

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
                   +  M+  G  P+++ + ILL   C+  +I  A +L    +  G    V    
Sbjct: 514 KFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHN 573

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
           +LI G   + +LD A  +   M    C+ N+VTY +L++G+ + +  + A      +   
Sbjct: 574 ILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKM 633

Query: 320 GHAPDLVFHNVLID--CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
           G  PD++ +N ++   CL    SY  A++ +D      + P  YT+  L+  V
Sbjct: 634 GLQPDIISYNTILKGLCLCHRVSY--AIEFFDDARNHGIFPTVYTWNILVRAV 684


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/466 (24%), Positives = 220/466 (47%), Gaps = 60/466 (12%)

Query: 135 YGMVLEAF-------------DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ 181
           +G+V++AF              +M + G  PN+     ++  L K  RV+  +++L+E  
Sbjct: 220 FGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMF 279

Query: 182 L----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIA 237
           L    P+  +FN  +  LCK + ++    ++  M+ +GF P+   +  L+N  CK+GR+ 
Sbjct: 280 LMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVD 339

Query: 238 EAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN-GCSPNVVTYTSL 296
            A  L   +        +  +  LI GF    RLD A  +   MV + G  P+V TY SL
Sbjct: 340 AAKDLFYRI----PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSL 395

Query: 297 IKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
           I G+ +  +  +A   L  + ++G  P++  + +L+D   K+G  D+A +V + +    L
Sbjct: 396 IYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGL 455

Query: 357 VPDSYTFCSLLSTVCLSGR-------FSLLPK------------LVCGL-EVE------- 389
            P++  F  L+S  C   R       F  +P+            L+ GL EV+       
Sbjct: 456 KPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALW 515

Query: 390 -----------ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
                      A+ V YN L++ F + G   +A KL N M+ +G   D  ++  L++GLC
Sbjct: 516 LLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLC 575

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
            A ++D+A ++++ ++ +  A +      +++ L  +G   +A++  +  ++     D+V
Sbjct: 576 RAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIV 635

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
           ++   I GL   GR E+   ++ +++   +PP+  T+  ++   CK
Sbjct: 636 TFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCK 681



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 116/469 (24%), Positives = 211/469 (44%), Gaps = 8/469 (1%)

Query: 84  QSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFD 143
           Q+  H +S   R+    +    ++ E+  +GCV  A+TF   +    + +      +  +
Sbjct: 256 QTLIHSLSKCNRVNEALQ----LLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVN 311

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSN 203
            M   GF P+      +M+ L KIGRVD    +      P  + FN  +        + +
Sbjct: 312 RMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDD 371

Query: 204 VKDVIGMMVRK-GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLI 262
            K V+  MV   G  P+V  +  L+  + K G +  A ++L  M   G   +V ++T+L+
Sbjct: 372 AKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILV 431

Query: 263 DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
           DGF +L ++D A  +  +M  +G  PN V +  LI  F +      A      +  +G  
Sbjct: 432 DGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCK 491

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL 382
           PD+   N LI  L ++     AL +   ++   +V ++ T+ +L++     G      KL
Sbjct: 492 PDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKL 551

Query: 383 VCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
           V  +  +    D + YN+L+   C+AG  ++A  L+  ML  G  P N S   L+ GLC 
Sbjct: 552 VNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCR 611

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
           +  ++EA+   + +V+     +     ++++ L  AGR    + +FR+   E  P D V+
Sbjct: 612 SGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVT 671

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
           +   +  L +GG   +A +L  +       PN  T+ ++L S   +  +
Sbjct: 672 FNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETL 720



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 171/355 (48%), Gaps = 8/355 (2%)

Query: 98  GRFETVRGIVGEL-ARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           GR +  + ++ ++    G V    T+   +  YW+  + G+ LE   +M   G  PN ++
Sbjct: 367 GRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYS 426

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
             I++D   K+G++D    VL E       PN + FN  +   CK + +    ++   M 
Sbjct: 427 YTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMP 486

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
           RKG  P+V  F  L++  C++  I  A  LL  MI+ G   +   +  LI+ F R   + 
Sbjct: 487 RKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIK 546

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A  L  +MV  G   + +TY SLIKG   A     A S  + +  +GHAP  +  N+LI
Sbjct: 547 EARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILI 606

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA-- 390
           + L + G  ++A++    ++     PD  TF SL++ +C +GR      +   L+ E   
Sbjct: 607 NGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIP 666

Query: 391 -DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
            D V +N L+S+ CK GF   A  L +  ++ GF P++ ++  LL+ +     +D
Sbjct: 667 PDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLD 721



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 137/596 (22%), Positives = 253/596 (42%), Gaps = 64/596 (10%)

Query: 57  LLNCPSDL-IALSFFIWCAKQRDYFHDVQSFDHMISVVTRL--TGRFETVRGIVGELARV 113
           LL  P ++  ++  F W   Q  Y H   SFD    ++ +L   G F+T+  ++ ++   
Sbjct: 84  LLELPLNVSTSMELFSWTGSQNGYRH---SFDVYQVLIGKLGANGEFKTIDRLLIQMKDE 140

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGR-FGFTPNTFARNIVMDVLFKIGRVDL 172
           G V K   F+  +R Y +    G       EM   +   P   + N+V+++L       +
Sbjct: 141 GIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKV 200

Query: 173 GIKV----LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLN 228
              V    L     P   +F + +   C +N++ +   ++  M + G  PN  +++ L++
Sbjct: 201 AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIH 260

Query: 229 CFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSP 288
              K  R+ EA QLL  M  +G       +  +I G  +  R++ A  +  +M+  G +P
Sbjct: 261 SLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAP 320

Query: 289 NVVTY-------------------------------TSLIKGFMEAKMFSIAFSFL-DML 316
           + +TY                                +LI GF+       A + L DM+
Sbjct: 321 DDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMV 380

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
            S G  PD+  +N LI    K G    AL+V   +      P+ Y++  L+   C  G+ 
Sbjct: 381 TSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKI 440

Query: 377 SLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
                ++  +  +    + V +N L+S FCK     +AV+++  M  KG  PD Y+F  L
Sbjct: 441 DEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSL 500

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           + GLC   +I  A+ + + ++      N   +  +++  +  G   +A +L    + +  
Sbjct: 501 ISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGS 560

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
           PLD ++Y   I+GL   G  ++A  L+ +M      P+  +  +++   C+         
Sbjct: 561 PLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCR-------SG 613

Query: 554 LLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD--EMWRKL 607
           ++++ ++ + E+    S   T  I  F+   S +N L   C  G I D   M+RKL
Sbjct: 614 MVEEAVEFQKEMVLRGS---TPDIVTFN---SLINGL---CRAGRIEDGLTMFRKL 660



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 90/386 (23%), Positives = 163/386 (42%), Gaps = 29/386 (7%)

Query: 238 EAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLI 297
           + Y+LL L + + TS+ + +WT   +G+R     D+   L  K+  NG    +      +
Sbjct: 80  QLYKLLELPLNVSTSMELFSWTGSQNGYRH--SFDVYQVLIGKLGANGEFKTIDRLLIQM 137

Query: 298 KG----FMEAKMFSIAFSF-------------LDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           K     F E+   SI   +             L+M       P    +NV+++ L     
Sbjct: 138 KDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNC 197

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVC----LSGRFSLLPKLVCGLEVEADLVVYN 396
           +  A +V+  +L  K+ P  +TF  ++   C    +    SLL  +     V  + V+Y 
Sbjct: 198 HKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCV-PNSVIYQ 256

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            L+    K    N+A++L   M   G  PD  +F  ++ GLC   +I+EA  +   +++ 
Sbjct: 257 TLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIR 316

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
             A +   +  +++ L + GR   A  LF R      P ++V +   I G +  GR ++A
Sbjct: 317 GFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI---PKP-EIVIFNTLIHGFVTHGRLDDA 372

Query: 517 YILYSQM-KHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTK 575
             + S M     + P+  TY  ++  + KE  + +   +L D+ +   + + ++   L  
Sbjct: 373 KAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVD 432

Query: 576 FIFKFHSSSSAVNQLVEMCNLGLIPD 601
              K      A N L EM   GL P+
Sbjct: 433 GFCKLGKIDEAYNVLNEMSADGLKPN 458


>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
 gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 148/633 (23%), Positives = 266/633 (42%), Gaps = 67/633 (10%)

Query: 47  ILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGI 106
           +L    V + L N P+ L+AL FF   A    + H   ++  MI    RL G    + GI
Sbjct: 37  LLKESEVLNKLKNEPNILLALHFFKSIANSNSFKHTPLTYTTMIK---RL-GYERDIDGI 92

Query: 107 -----VGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTP--------- 152
                + +L  + C      F++ +  Y R  +    L+ F  +G FG  P         
Sbjct: 93  QYLLQLMKLEGISC--NEDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVL 150

Query: 153 --------------------------NTFARNIVMDVLFKIGRVDLGIKVLKETQ----L 182
                                     N +  N+++  L K  RVD   K+L E      +
Sbjct: 151 DALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCI 210

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+ +S+   + ++C+L  V   +++   M  K F P   ++  L+N FC+  ++ E ++L
Sbjct: 211 PDAVSYTTVVSSMCRLGKVEEAREL--SMRIKSFVP---VYNALINGFCREHKMEEVFEL 265

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
              M   G    V  ++ +I+    +  ++MA  +  KM   GCSPNV T+TSL+KG+  
Sbjct: 266 FNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFM 325

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
                 A    + +  EG  P+ V +N LI  L   G   +A+ V   +    + P+  T
Sbjct: 326 GGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETT 385

Query: 363 FCSLLSTVC----LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           + +L+        L G   +  K++       ++VVY  ++   C+    N A+ L   M
Sbjct: 386 YSTLIDGFAKAGDLVGASEIWNKMITN-GCLPNVVVYTCMVDVLCRNSMFNHALHLIENM 444

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
            +    P+  +F   ++GLC + K + A+ V   +     A N   +  ++D L  A R 
Sbjct: 445 ANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRT 504

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            +A+Q+       +   ++V+Y   + G    G  + A  +  ++      P++ TY  +
Sbjct: 505 REALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTV 564

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIE--LDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNL 596
           + ++CK+  +K   +L+ D +  + E   D  T   L   +  +     AV  L +M N 
Sbjct: 565 IYAYCKQGEVKTAIQLV-DRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINE 623

Query: 597 GLIPDE-MWRKL--GLLSD-ETMTPVSLFDGFV 625
           G+ P+   W  L  GL S    + P+ + D  +
Sbjct: 624 GICPNRATWNALVRGLFSKLGHLGPIHIVDNIL 656


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 119/474 (25%), Positives = 218/474 (45%), Gaps = 22/474 (4%)

Query: 86  FDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEM 145
           F+ + S V R T +++ V G    +   G      T  + +  Y R +    +L AF  +
Sbjct: 102 FNRLCSAVAR-TKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKK---LLFAFSVL 157

Query: 146 GR---FGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKL 198
           GR    G+ P+T   + +++     GRV   +    ++++  Q P+ ++ +  +  LC  
Sbjct: 158 GRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLK 217

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
             VS    +I  MV  GF P+   +  +LN  CK G  A A  L   M       SV  +
Sbjct: 218 GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQY 277

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
           +++ID   +    D A  L+ +M   G   +VVTY+SLI G      +      L  +  
Sbjct: 278 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG 337

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC------- 371
               PD+V  + LID   K G   +A ++Y+ ++   + PD+ T+ SL+   C       
Sbjct: 338 RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHE 397

Query: 372 LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
            +  F L+    C    E D+V Y+ L++ +CKA   +  ++L+  +  KG  P+  ++ 
Sbjct: 398 ANQMFDLMVSKGC----EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYN 453

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            L+ G C + K++ A  ++Q +V      +   +  ++D L + G  +KA+++F +    
Sbjct: 454 TLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKS 513

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
           +  L +  Y + I G+    + ++A+ L+  +    V P+  TY VM+   CK+
Sbjct: 514 RMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKK 567



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 101/413 (24%), Positives = 188/413 (45%), Gaps = 39/413 (9%)

Query: 134 MYGMVLEAF---DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF----L 186
           + G V EA    D M  +GF P+      V++ L K G   L + + ++ +  N     +
Sbjct: 216 LKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVV 275

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
            ++I + +LCK     +   +   M  KG   +V  +  L+   C  G+  +  ++L  M
Sbjct: 276 QYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 335

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
           I       V  ++ LID F +  +L  A  L+ +M+  G +P+ +TY SLI GF +    
Sbjct: 336 IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCL 395

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
             A    D++ S+G  PD+V +++LI+   K    DD + ++  +    L+P++ T+   
Sbjct: 396 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITY--- 452

Query: 367 LSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
                                        N L+  FC++G  N A +L+  M+ +G  P 
Sbjct: 453 -----------------------------NTLVLGFCQSGKLNAAKELFQEMVSRGVPPS 483

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
             ++  LL GLC   ++++A+ +++ +  +   +   ++  I+  +  A +   A  LF 
Sbjct: 484 VVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFC 543

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
               +    DVV+Y V I GL + G   EA +L+ +MK     P+ +TY +++
Sbjct: 544 SLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 596



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/329 (24%), Positives = 148/329 (44%), Gaps = 5/329 (1%)

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           L+E M+Q+   P  + +  L       K + +   F   +E  G   D+    ++I+C  
Sbjct: 86  LFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYC 145

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV---CGLEVEADLV 393
           +      A  V     +L   PD+ TF +L++  CL GR S    LV     ++   DLV
Sbjct: 146 RKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLV 205

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
             + L++  C  G  ++A+ L + M++ GF PD  ++  +L  LC +     A+++++ +
Sbjct: 206 TVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM 265

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
              N   +   ++ ++D L + G    A+ LF    ++    DVV+Y+  I GL   G+ 
Sbjct: 266 EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKW 325

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
           ++   +  +M    + P+  T+  ++  F KE  +   K L  ++I   I  D  T   L
Sbjct: 326 DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 385

Query: 574 TKFIFKFHSSSSAVNQLVE-MCNLGLIPD 601
                K +    A NQ+ + M + G  PD
Sbjct: 386 IDGFCKENCLHEA-NQMFDLMVSKGCEPD 413


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/429 (26%), Positives = 196/429 (45%), Gaps = 26/429 (6%)

Query: 152 PNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDV 207
           PN    + ++D L K GR     +L I++  +   PN +++N  +   C     S  + +
Sbjct: 251 PNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRL 310

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
           +  M+ +   PNV  +  L+N F K G+  EA +L   M+  G   +   +  +IDGF +
Sbjct: 311 LQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK 370

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
             RLD A  ++  M   GCSP+V T+T+LI G+  AK        L  +   G   + V 
Sbjct: 371 QDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVT 430

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-------FSLLP 380
           +N LI     +G  + ALD+   ++   + PD  T  +LL  +C +G+       F  + 
Sbjct: 431 YNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQ 490

Query: 381 KLVCGLE-------VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
           K    L+       VE D++ YN L+      G   +A +LY  M  +G  PD  ++  +
Sbjct: 491 KSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 550

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF----RRAI 489
           + GLC   ++DEA  ++  +   + + N      +++   +AGR    ++LF    RR I
Sbjct: 551 IDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGI 610

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
           V     D + Y   I G  + G    A  ++ +M    V P+  T R ML  F  +  ++
Sbjct: 611 VA----DAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELE 666

Query: 550 MVKRLLQDV 558
               +L+D+
Sbjct: 667 RAVAMLEDL 675



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 129/578 (22%), Positives = 247/578 (42%), Gaps = 46/578 (7%)

Query: 83  VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF 142
           V  F+ ++  V R+  R + V  +  ++ R        +F + ++ +         L  F
Sbjct: 81  VIDFNKLMGAVVRME-RPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTF 139

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVS 202
            ++ + G  P+      ++  L    RV   + +  +   P+ L+F   +  LC+   V 
Sbjct: 140 GKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRPDVLTFTTLMNGLCREGRVV 199

Query: 203 NVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG-TSLSVNAWTVL 261
               ++  MV  G  P+   +   ++  CKMG    A  LL  M  +     +V  ++ +
Sbjct: 200 EAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAI 259

Query: 262 IDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH 321
           IDG  +  R   +  L+ +M   G  PN+VTY  +I GF  +  +S A   L  +     
Sbjct: 260 IDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKI 319

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPK 381
           +P++V +N LI+   K G + +A ++YD +L   ++P++ T+ S++   C   R      
Sbjct: 320 SPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAED 379

Query: 382 ---LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
              L+       D+  +  L+  +C A   +  ++L + M  +G   +  ++  L+ G C
Sbjct: 380 MFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFC 439

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL--- 495
               ++ A+++ Q ++ +    +      ++D L + G+   A+++F+     K  L   
Sbjct: 440 LVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDAS 499

Query: 496 --------DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN 547
                   DV++Y + I GL+  G+  EA  LY +M H  + P+  TY  M+   CK+  
Sbjct: 500 HPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS- 558

Query: 548 IKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVE-MCNLGLIPD----- 601
                            LD  T + ++     F  +    N L+   C  G + D     
Sbjct: 559 ----------------RLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELF 602

Query: 602 -EMWRKLGLLSDETMTPVSLFDGFVPCERRAGNANHLL 638
            EM R+ G+++D  +  ++L  GF    R+ GN N  L
Sbjct: 603 CEMGRR-GIVADAIIY-ITLIYGF----RKVGNINGAL 634



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 113/472 (23%), Positives = 210/472 (44%), Gaps = 25/472 (5%)

Query: 136 GMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ-----LPNFLS 187
           G V+EA    D M   G  P+       +D + K+G     + +L++ +      PN + 
Sbjct: 196 GRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVI 255

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           ++  +  LCK    S+  ++   M  KG +PN+  +  ++  FC  GR + A +LL  M+
Sbjct: 256 YSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEML 315

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
               S +V  +  LI+ F +  +   A  L+++M+  G  PN +TY S+I GF +     
Sbjct: 316 ERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLD 375

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A     ++ ++G +PD+     LID        DD +++   +    LV ++ T+ +L+
Sbjct: 376 AAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLI 435

Query: 368 STVCLSGRFSL---LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM------ 418
              CL G  +    L + +    V  D+V  N LL   C  G    A++++  M      
Sbjct: 436 HGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMD 495

Query: 419 LD-----KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
           LD      G  PD  ++  L+ GL    K  EA  +Y+ +       +   +++++D L 
Sbjct: 496 LDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 555

Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
           +  R  +A Q+F     + +  +VV++   I G  + GR ++   L+ +M    +  +A 
Sbjct: 556 KQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAI 615

Query: 534 TYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSS 585
            Y  ++  F K  NI     + Q++I + +   Y  +I +   +  F S   
Sbjct: 616 IYITLIYGFRKVGNINGALDIFQEMISSGV---YPDTITIRNMLTGFWSKEE 664



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 90/400 (22%), Positives = 175/400 (43%), Gaps = 19/400 (4%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           + +  F ++ +++ MI     ++GR+   + ++ E+          T+   +  + +   
Sbjct: 280 QDKGIFPNIVTYNCMIGGFC-ISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGK 338

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV--LKETQ--LPNFLSFNI 190
           +    E +DEM   G  PNT   N ++D   K  R+D    +  L  T+   P+  +F  
Sbjct: 339 FFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTT 398

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +   C    + +  +++  M R+G   N   +  L++ FC +G +  A  L   MI+ G
Sbjct: 399 LIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSG 458

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQ-----------NGCSPNVVTYTSLIKG 299
               +     L+DG     +L  A  +++ M +           NG  P+V+TY  LI G
Sbjct: 459 VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICG 518

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
            +    F  A    + +   G  PD + ++ +ID L K    D+A  ++  +      P+
Sbjct: 519 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPN 578

Query: 360 SYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYN 416
             TF +L++  C +GR     +L C +    + AD ++Y  L+  F K G  N A+ ++ 
Sbjct: 579 VVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQ 638

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            M+  G  PD  +   +L G     +++ A+ + + + M+
Sbjct: 639 EMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQMS 678



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 131/289 (45%), Gaps = 8/289 (2%)

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           L  G   ++ L+ A  L+  M+++   P+V+ +  L+   +  +   +  S    +E + 
Sbjct: 52  LRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ 111

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
              D+    +LI C         AL  +  L +L L PD  TF +LL  +CL  R S   
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171

Query: 381 KL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
            L   +C      D++ +  L++  C+ G   +AV L + M++ G  PD  ++   + G+
Sbjct: 172 DLFHQIC----RPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGM 227

Query: 438 CGARKIDEAINVYQGI-VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
           C       A+N+ + +  +++   N  +++AI+D L + GR   +  LF     +    +
Sbjct: 228 CKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPN 287

Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
           +V+Y   I G    GR   A  L  +M    + PN  TY  ++ +F KE
Sbjct: 288 IVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKE 336



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 136/309 (44%), Gaps = 14/309 (4%)

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
           SV  +  L+    R+ R D+   L++KM +     ++ ++T LIK F        A S  
Sbjct: 80  SVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTF 139

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
             L   G  PD+V    L+  L       +ALD++  +      PD  TF +L++ +C  
Sbjct: 140 GKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR----PDVLTFTTLMNGLCRE 195

Query: 374 GR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD-KGFTPDNY 428
           GR     +LL ++V    ++ D + Y   +   CK G    A+ L   M +     P+  
Sbjct: 196 GRVVEAVALLDRMVEN-GLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVV 254

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAV--NAHVHTAIVDRLIEAGRCHKAIQLFR 486
            +  ++ GLC   +  ++ N++  I M +  +  N   +  ++     +GR   A +L +
Sbjct: 255 IYSAIIDGLCKDGRHSDSHNLF--IEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQ 312

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
             +  K   +VV+Y   I   ++ G+  EA  LY +M    + PN  TY  M+  FCK+ 
Sbjct: 313 EMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQD 372

Query: 547 NIKMVKRLL 555
            +   + + 
Sbjct: 373 RLDAAEDMF 381


>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
 gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
 gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
 gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
 gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/443 (23%), Positives = 210/443 (47%), Gaps = 9/443 (2%)

Query: 126 LRIYWRGEMYGMVLEAF---DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV---LKE 179
           L+I+ R    G  +E+    + M R G+ P+      ++   F +  +   ++V   L++
Sbjct: 93  LKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEK 152

Query: 180 TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEA 239
              P+  ++N  +   CK+N + +   V+  M  K F P+   + I++   C  G++  A
Sbjct: 153 FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 212

Query: 240 YQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG 299
            ++L  +++     +V  +T+LI+       +D A  L ++M+  G  P++ TY ++I+G
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
             +  M   AF  +  LE +G  PD++ +N+L+  L   G +++   +   +   K  P+
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332

Query: 360 SYTFCSLLSTVCLSGRFSL---LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYN 416
             T+  L++T+C  G+      L KL+    +  D   Y+ L++ FC+ G  + A++   
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 392

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
           TM+  G  PD  ++  +L  LC   K D+A+ ++  +     + N+  +  +   L  +G
Sbjct: 393 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
              +A+ +    +      D ++Y   I  L   G  +EA+ L   M+     P+  TY 
Sbjct: 453 DKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYN 512

Query: 537 VMLLSFCKERNIKMVKRLLQDVI 559
           ++LL FCK   I+    +L+ ++
Sbjct: 513 IVLLGFCKAHRIEDAINVLESMV 535



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 102/420 (24%), Positives = 189/420 (45%), Gaps = 49/420 (11%)

Query: 75  KQRDYFHDVQSFDHMI-SVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGE 133
           + +D+  D  +++ MI S+ +R  G+ +    ++ +L    C     T+ + +       
Sbjct: 185 RSKDFSPDTVTYNIMIGSLCSR--GKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEG 242

Query: 134 MYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFN 189
                L+  DEM   G  P+ F  N ++  + K G VD   ++++  +L    P+ +S+N
Sbjct: 243 GVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYN 302

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
           I L  L         + ++  M  +   PNV  + IL+   C+ G+I EA  LL L    
Sbjct: 303 ILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKL---- 358

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
                                          M + G +P+  +Y  LI  F       +A
Sbjct: 359 -------------------------------MKEKGLTPDAYSYDPLIAAFCREGRLDVA 387

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
             FL+ + S+G  PD+V +N ++  L K G  D AL+++  L E+   P+S ++ ++ S 
Sbjct: 388 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSA 447

Query: 370 VCLSGR-----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
           +  SG        +L  +  G  ++ D + YN+++S  C+ G  ++A +L   M    F 
Sbjct: 448 LWSSGDKIRALHMILEMMSNG--IDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFH 505

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           P   ++  +L G C A +I++AINV + +V N    N   +T +++ +  AG   +A++L
Sbjct: 506 PSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 92/366 (25%), Positives = 171/366 (46%), Gaps = 39/366 (10%)

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
           +L E MV+ G +P+V+  T LIKGF   +    A   +++LE  G  PD+  +N LI+  
Sbjct: 110 HLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ-PDVFAYNALINGF 168

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADL 392
            KM   DDA  V D +      PD+ T+  ++ ++C  G+  L  K++  L     +  +
Sbjct: 169 CKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTV 228

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           + Y  L+      G  ++A+KL + ML +G  PD +++  ++RG+C    +D A  + + 
Sbjct: 229 ITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRN 288

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           + +     +   +  ++  L+  G+  +  +L  +   EK   +VV+Y++ I  L   G+
Sbjct: 289 LELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGK 348

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI------------- 559
            EEA  L   MK   + P+AY+Y  ++ +FC+E  + +    L+ +I             
Sbjct: 349 IEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNT 408

Query: 560 -----------DARIEL---------DYHTSIRLTKFIFKFHSSSS--AVNQLVEMCNLG 597
                      D  +E+           ++S   T F   + S     A++ ++EM + G
Sbjct: 409 VLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNG 468

Query: 598 LIPDEM 603
           + PDE+
Sbjct: 469 IDPDEI 474



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/307 (22%), Positives = 134/307 (43%), Gaps = 47/307 (15%)

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL--LPKLVCGLEV-----E 389
           + G+Y ++L + + ++     PD      +L T  + G F+L  +PK V  +E+     +
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDV-----ILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ 155

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            D+  YNAL++ FCK    + A ++ + M  K F+PD  ++  ++  LC   K+D A+ V
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215

Query: 450 YQGIVMNN--PAV---------------------------------NAHVHTAIVDRLIE 474
              ++ +N  P V                                 +   +  I+  + +
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
            G   +A ++ R   ++    DV+SY + +R LL  G+ EE   L ++M      PN  T
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335

Query: 535 YRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMC 594
           Y +++ + C++  I+    LL+ + +  +  D ++   L     +      A+  L  M 
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395

Query: 595 NLGLIPD 601
           + G +PD
Sbjct: 396 SDGCLPD 402


>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 119/492 (24%), Positives = 224/492 (45%), Gaps = 14/492 (2%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVG-----CVIKAQ 120
           AL  + +  K   YF DV + + +++++ +L GR E  R +  E+  +      CV    
Sbjct: 148 ALELYYFVLKTYTYFPDVIACNSLLNMLVKL-GRIEIARKLYDEMLEIDGAGDRCVDNYS 206

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET 180
           T ++   +   G++        D  G+ G  PN    N ++D   K G +++   +  E 
Sbjct: 207 TCIMVKGLCKEGKLEEGRKLIEDRWGQ-GCIPNIIFYNTLIDGYCKKGDMEMANGLFIEL 265

Query: 181 QLPNFL----SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
           +L  FL    ++   +   CK  D   +  ++  M  +G   NV+++  +++   K G I
Sbjct: 266 KLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHI 325

Query: 237 AEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSL 296
            +A + +  MI  G    +  +  LI G  R  ++  A  L E+ +  G  PN  +YT L
Sbjct: 326 VKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPL 385

Query: 297 IKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
           I  + +   +  A ++L  +   GH PDLV +  L+  L   G  D AL + + +LE  +
Sbjct: 386 IHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGV 445

Query: 357 VPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVK 413
            PD+  +  L+S +C   +      L+  +    V  D  VY  L+  F + G  ++A K
Sbjct: 446 FPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARK 505

Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
           L+   ++KG  P    +  +++G C    + +A+     +   + A +   ++ ++D  +
Sbjct: 506 LFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYV 565

Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
           +      A ++FR  +  K   +VV+YT  I G    G    +  ++ +M+   + PN  
Sbjct: 566 KQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVV 625

Query: 534 TYRVMLLSFCKE 545
           TY +++ SFCKE
Sbjct: 626 TYSILIGSFCKE 637



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/390 (23%), Positives = 173/390 (44%), Gaps = 25/390 (6%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLG----IKVLKETQLPNFLSFNIALCNLCKLNDVSNV 204
           G  PN F+   ++    K G  D      I++ +    P+ +++   +  L    +V   
Sbjct: 374 GLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVA 433

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
             +   M+ +G +P+  ++ IL++  CK  ++  A  LL  M+          +  L+DG
Sbjct: 434 LTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDG 493

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
           F R   LD A  L+E  ++ G +P +V Y ++IKG+ +  M   A + ++ ++    APD
Sbjct: 494 FIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPD 553

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL-- 382
              ++ +ID   K    D A  ++  ++++K  P+  T+ SL++  C  G      K+  
Sbjct: 554 EFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFR 613

Query: 383 ---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC- 438
               CGL    ++V Y+ L+  FCK      A   +  ML     P++ +F  L+ G   
Sbjct: 614 EMQACGL--VPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSK 671

Query: 439 -GARKIDEAINVYQG------------IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
            G R I E  N +Q             ++ +  A  +  + +I+  L + G    A+QL 
Sbjct: 672 NGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLS 731

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
            +   +    D VS+   + G+   GR++E
Sbjct: 732 NKMTSKGCIPDSVSFVALLHGVCLEGRSKE 761


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/461 (26%), Positives = 218/461 (47%), Gaps = 13/461 (2%)

Query: 147 RFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVS 202
           + G+ P+T   N +M  L   G V   +    KV+ +    + +S+   L  LCK+ +  
Sbjct: 73  KLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETR 132

Query: 203 NVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLI 262
               ++ M+  +   PNV M+  +++  CK   + EAY L   M   G       +T LI
Sbjct: 133 CAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLI 192

Query: 263 DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
            GF  L +L  A  L ++M+    +P V  Y  LI    +      A + L ++  EG  
Sbjct: 193 YGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIK 252

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL 382
           P +V ++ L+D    +G   +A  ++  ++++ + P+ Y++  +++ +C   R      L
Sbjct: 253 PGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNL 312

Query: 383 VCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
           +  +    +  D V YN+L+   CK+G    A+ L N M  +G   D  ++  LL  LC 
Sbjct: 313 LREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCK 372

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
            + +D+A  ++  +         + +TA++D L + GR   A +LF+  +V+   +DV +
Sbjct: 373 NQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWT 432

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS-FCKERNIKMVKRLLQDV 558
           YTV I GL + G  +EA  + S+M+     PNA T+ +++ S F K+ N K  K L + +
Sbjct: 433 YTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMI 492

Query: 559 IDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLI 599
               + LD+  +      +F  + +  A   L EM   GL+
Sbjct: 493 AKGLLVLDFKVA-----DVFVQNENDKAEKLLHEMIAKGLL 528



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 105/416 (25%), Positives = 190/416 (45%), Gaps = 40/416 (9%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P  + FN  L +L K+        +   M  KG   N     IL+NCFC +G++A ++ +
Sbjct: 8   PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           LG ++ LG          L+ G      +  + +  +K+V  G   + V+Y +L+ G  +
Sbjct: 68  LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
                 A   L M+E     P++V +N +ID L K    ++A D+Y  +    + PD+ T
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAIT 187

Query: 363 FCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKL---- 414
           + +L+   CL G+    FSLL +++    +   + +YN L++  CK G   +A  L    
Sbjct: 188 YTTLIYGFCLLGQLMGAFSLLDEMILK-NINPGVYIYNILINALCKEGNVKEAKNLLAVM 246

Query: 415 -----------YNTMLDK--------------------GFTPDNYSFVGLLRGLCGARKI 443
                      Y+T++D                     G  P+ YS+  ++ GLC  +++
Sbjct: 247 TKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRV 306

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           DEA+N+ + ++  N   +   + +++D L ++GR   A+ L         P DVV+YT  
Sbjct: 307 DEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSL 366

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           +  L +    ++A  L+ +MK   + P  YTY  ++   CK   +K  + L Q ++
Sbjct: 367 LDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLL 422



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/320 (26%), Positives = 159/320 (49%), Gaps = 10/320 (3%)

Query: 137 MVLEAFD---EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFN 189
           +V EA+D   EM   G  P+      ++     +G++     +L E  L    P    +N
Sbjct: 165 LVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYN 224

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
           I +  LCK  +V   K+++ +M ++G  P V  +  L++ +C +G +  A Q+   M+ +
Sbjct: 225 ILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQM 284

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           G + +V ++ ++I+G  + +R+D A  L  +M+     P+ VTY SLI G  ++   + A
Sbjct: 285 GVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSA 344

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
            + ++ +   G   D+V +  L+D L K  + D A  ++  + E  + P  YT+ +L+  
Sbjct: 345 LNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDG 404

Query: 370 VCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
           +C  GR     +L   L V+    D+  Y  ++S  CK G  ++A+ + + M D G  P+
Sbjct: 405 LCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPN 464

Query: 427 NYSFVGLLRGLCGARKIDEA 446
             +F  ++R L    + D+A
Sbjct: 465 AVTFEIIIRSLFEKDENDKA 484



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 111/239 (46%), Gaps = 5/239 (2%)

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----F 376
           H P ++  N ++  L+KM  Y  A+ +   +    +  +  T   L++  C  G+    F
Sbjct: 6   HTPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSF 65

Query: 377 SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
           S+L K++  L  + D +  N L+   C  G   +++  ++ ++ +GF  D+ S+  LL G
Sbjct: 66  SVLGKIL-KLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNG 124

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
           LC   +   A+ + + I   +   N  ++  I+D L +    ++A  L+          D
Sbjct: 125 LCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPD 184

Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
            ++YT  I G    G+   A+ L  +M    + P  Y Y +++ + CKE N+K  K LL
Sbjct: 185 AITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLL 243


>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 784

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 131/557 (23%), Positives = 231/557 (41%), Gaps = 65/557 (11%)

Query: 104 RGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA--------FDEMGRFGFTPNTF 155
           + I  ++ ++G  +   TF + +        YG  +E           +M  F   P+  
Sbjct: 197 KAIFSDVIKLGVKVNTNTFNILI--------YGCCIENKLSEAIGLIGKMKDFSCFPDNV 248

Query: 156 ARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
           + N ++DVL K G++    DL + +     LPN  +FNI +   CKL  +     VI +M
Sbjct: 249 SYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLM 308

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
            +    P+V  + +L+   CK G+I EA++L   M  L     V  +  LI+G       
Sbjct: 309 AQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSS 368

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
                L +KM   G  PN VTY  ++K +++      A + L  +E  G +PD V  N L
Sbjct: 369 LKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTL 428

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVC------- 384
           I+   K G   +A  + D +    L  +S T  ++L T+C   +     KL+        
Sbjct: 429 INGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGY 488

Query: 385 -----------------GLEVEA--------------DLVVYNALLSYFCKAGFPNQAVK 413
                            G  VEA               ++ YN ++   C +G  +Q++ 
Sbjct: 489 FVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSID 548

Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
             N +L+ G  PD  ++  ++ G C   ++++A   +  +V  +   +      ++  L 
Sbjct: 549 KLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLC 608

Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
             G   KA++LF   I +   +D V+Y   I GL +  R EEA+ L ++M+   + P+ Y
Sbjct: 609 TEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCY 668

Query: 534 TYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFH-------SSSSA 586
           TY  +L +      +K  +  +  +++     D   S+   K             +S + 
Sbjct: 669 TYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNSVTF 728

Query: 587 VNQLVEMCNLGLIPDEM 603
             Q+ E+C  G   D M
Sbjct: 729 SEQINELCTQGKYKDAM 745



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 184/423 (43%), Gaps = 63/423 (14%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGR--------------VDLGIKVLKETQLPNF 185
           + F+ M R    PN    N +++ L +                 + LG+KV       N 
Sbjct: 160 QIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKV-------NT 212

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGL 245
            +FNI +   C  N +S    +IG M     +P+   +  +L+  CK G++ EA  LL  
Sbjct: 213 NTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLD 272

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           M   G   + N + +L+ G+ +L  L  A  + + M QN   P+V TY  LI G  +   
Sbjct: 273 MKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGK 332

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
              AF   D +E+    PD+V +N LI+     G +D                     CS
Sbjct: 333 IDEAFRLKDEMENLKLLPDVVTYNTLIN-----GCFD---------------------CS 366

Query: 366 LLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
                 L G F L+ K+  G  V+ + V YN ++ ++ K G  + A      M + GF+P
Sbjct: 367 ----SSLKG-FELIDKME-GKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSP 420

Query: 426 DNYSFVGLLRGLCGARKIDEAINVY-----QGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
           D  +F  L+ G C A ++ EA  +      +G+ MN+  +N  +HT   +R ++      
Sbjct: 421 DCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLD-----D 475

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
           A +L   A    Y +D VSY   I G  + G++ EA  L+ +MK   + P+  TY  M+ 
Sbjct: 476 AYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIG 535

Query: 541 SFC 543
             C
Sbjct: 536 GLC 538


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/510 (22%), Positives = 225/510 (44%), Gaps = 38/510 (7%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR      ++ E++  GC      + + L    R   +   +   + M   G T +T   
Sbjct: 125 GRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNC 184

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N+V++ + + G VD  + +L++        + +S+N  L  LC      +V++++  MVR
Sbjct: 185 NLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVR 244

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
               PN+  F  L+   C+ G     +++L  M   G +  +  +  +IDG  +   L++
Sbjct: 245 VDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEV 304

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL-DMLESEGHAPDLVFHNVLI 332
           A  +  +M   G  PNVV Y +++KG   A+ +  A   L +M + +    D+ F N+L+
Sbjct: 305 ANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTF-NILV 363

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADL 392
           D   + G  D  +++ + +L    +PD                                +
Sbjct: 364 DFFCQNGLVDRVIELLEQMLSHGCMPD--------------------------------V 391

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           + Y  +++ FCK G  ++AV L  +M   G  P+  S+  +L+GLC A +  +A  +   
Sbjct: 392 ITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQ 451

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           ++      N      +++ L + G   +AI+L ++ +V     D++SY+  I GL + G+
Sbjct: 452 MIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 511

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
           TEEA  L + M +  + PN   Y  +  +  +E  +  V ++  ++ D  I  D      
Sbjct: 512 TEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNA 571

Query: 573 LTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
           +   + K   +  A++    M + G +P+E
Sbjct: 572 VISSLCKRWETDRAIDFFAYMVSNGCMPNE 601



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 114/465 (24%), Positives = 197/465 (42%), Gaps = 36/465 (7%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G  +   G++ +LA  GC     ++   L+     + +G V E  DEM R    PN    
Sbjct: 195 GCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTF 254

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N ++  L + G  +   +VL +       P+   +   +  +CK   +    +++  M  
Sbjct: 255 NTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G  PNV  +  +L   C   R  EA +LL  M      L    + +L+D F +   +D 
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
              L E+M+ +GC P+V+TYT++I GF +  +   A   L  + S G  P+ V + +++ 
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLV 393
            L   G + DA ++   +++    P+  TF                              
Sbjct: 435 GLCSAGRWVDAEELMSQMIQQGCPPNPVTF------------------------------ 464

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
             N L+++ CK G   QA++L   ML  G +PD  S+  ++ GL  A K +EA+ +   +
Sbjct: 465 --NTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 522

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
           V    + N  ++++I   L   GR +K IQ+F          D V Y   I  L +   T
Sbjct: 523 VNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWET 582

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           + A   ++ M      PN  TY +++     E   K  + LL ++
Sbjct: 583 DRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSEL 627



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 106/446 (23%), Positives = 210/446 (47%), Gaps = 15/446 (3%)

Query: 78  DYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGM 137
           D   ++ +F+ +I  + R  G FE V  ++ +++  GC    + +   +    +     +
Sbjct: 246 DCAPNIVTFNTLIGYLCR-NGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEV 304

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE---TQLP-NFLSFNIALC 193
             E  + M  +G  PN    N V+  L    R     ++L E      P + ++FNI + 
Sbjct: 305 ANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVD 364

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
             C+   V  V +++  M+  G  P+V  +  ++N FCK G I EA  LL  M + G   
Sbjct: 365 FFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKP 424

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
           +  ++T+++ G     R   A  L  +M+Q GC PN VT+ +LI    +  +   A   L
Sbjct: 425 NTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELL 484

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
             +   G +PDL+ ++ +ID L K G  ++AL++ + ++   + P++  + S+   +   
Sbjct: 485 KQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSRE 544

Query: 374 GRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           GR + + ++   ++   + +D V+YNA++S  CK    ++A+  +  M+  G  P+  ++
Sbjct: 545 GRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTY 604

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV--HTAIVDRLIEAGRCHKAIQLFRRA 488
             L++GL       EA  +   +  +  A+  H+  H  I +   E G+  K  +    A
Sbjct: 605 TMLIKGLASEGLAKEAQELLSELC-SRGALRKHLMRHFGISNCTQENGK-QKCEENLTSA 662

Query: 489 IVEKY--PLDVVSYTVAIRGLLEGGR 512
           +   Y  P++++ + + I+ L  G +
Sbjct: 663 VDNNYKLPIEILGF-LEIQNLRPGEK 687



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 112/506 (22%), Positives = 224/506 (44%), Gaps = 53/506 (10%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D+ S++ ++  +  +  R+  V  ++ E+ RV C     TF   +    R  ++  V E 
Sbjct: 215 DIVSYNAVLKGLC-MAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEV 273

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDV 201
             +M   G TP+      ++D + K G +++  ++L   ++P++                
Sbjct: 274 LAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILN--RMPSY---------------- 315

Query: 202 SNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVL 261
                        G  PNV  +  +L   C   R  EA +LL  M      L    + +L
Sbjct: 316 -------------GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNIL 362

Query: 262 IDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH 321
           +D F +   +D    L E+M+ +GC P+V+TYT++I GF +  +   A   L  + S G 
Sbjct: 363 VDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGC 422

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPK 381
            P+ V + +++  L   G + DA ++   +++    P+  TF +L++ +C  G      +
Sbjct: 423 KPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE 482

Query: 382 LVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
           L+  + V     DL+ Y+ ++    KAG   +A++L N M++KG +P+   +  +   L 
Sbjct: 483 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALS 542

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
              ++++ I ++  I       +A ++ A++  L +     +AI  F   +      +  
Sbjct: 543 REGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNES 602

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQM-------KHIAVPPNAYTYRVMLLSFCKERNIKMV 551
           +YT+ I+GL   G  +EA  L S++       KH+         R   +S C + N    
Sbjct: 603 TYTMLIKGLASEGLAKEAQELLSELCSRGALRKHL--------MRHFGISNCTQEN---G 651

Query: 552 KRLLQDVIDARIELDYHTSIRLTKFI 577
           K+  ++ + + ++ +Y   I +  F+
Sbjct: 652 KQKCEENLTSAVDNNYKLPIEILGFL 677



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/284 (22%), Positives = 114/284 (40%), Gaps = 40/284 (14%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
           Q+D   D  +F+ ++    +  G  + V  ++ ++   GC+    T+   +  + +  + 
Sbjct: 349 QKDCPLDDVTFNILVDFFCQ-NGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLI 407

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR----VDLGIKVLKETQLPNFLSFNIA 191
              +     M   G  PNT +  IV+  L   GR     +L  +++++   PN ++FN  
Sbjct: 408 DEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTL 467

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           +  LCK   V    +++  M+  G  P++  +  +++   K G+  EA +LL +M+  G 
Sbjct: 468 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGI 527

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYL--------------------------WEK----- 280
           S +   ++ +     R  R++    +                          WE      
Sbjct: 528 SPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAID 587

Query: 281 ----MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
               MV NGC PN  TYT LIKG     +   A   L  L S G
Sbjct: 588 FFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/237 (18%), Positives = 98/237 (41%), Gaps = 3/237 (1%)

Query: 365 SLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
           +L+ ++C +GR +   + +      A +V YNA+++ +C+AG   Q              
Sbjct: 52  ALIRSLCSAGRTAEAARALADAGDAAGVVAYNAMVAGYCRAG---QLAAARRLAAAVPVP 108

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           P+ Y+F  ++RGLC   +I +A+ V   +     A    ++  I++    +G    ++++
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
                 +   LD  +  + +  + E G  +EA  L  ++       +  +Y  +L   C 
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 545 ERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            +    V+ L+ +++      +  T   L  ++ +          L +M   G  PD
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/510 (22%), Positives = 225/510 (44%), Gaps = 38/510 (7%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR      ++ E++  GC      + + L    R   +   +   + M   G T +T   
Sbjct: 125 GRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNC 184

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N+V++ + + G VD  + +L++        + +S+N  L  LC      +V++++  MVR
Sbjct: 185 NLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVR 244

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
               PN+  F  L+   C+ G     +++L  M   G +  +  +  +IDG  +   L++
Sbjct: 245 VDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEV 304

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL-DMLESEGHAPDLVFHNVLI 332
           A  +  +M   G  PNVV Y +++KG   A+ +  A   L +M + +    D+ F N+L+
Sbjct: 305 ANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTF-NILV 363

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADL 392
           D   + G  D  +++ + +L    +PD                                +
Sbjct: 364 DFFCQNGLVDRVIELLEQMLSHGCMPD--------------------------------V 391

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           + Y  +++ FCK G  ++AV L  +M   G  P+  S+  +L+GLC A +  +A  +   
Sbjct: 392 ITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQ 451

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           ++      N      +++ L + G   +AI+L ++ +V     D++SY+  I GL + G+
Sbjct: 452 MIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 511

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
           TEEA  L + M +  + PN   Y  +  +  +E  +  V ++  ++ D  I  D      
Sbjct: 512 TEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNA 571

Query: 573 LTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
           +   + K   +  A++    M + G +P+E
Sbjct: 572 VISSLCKRWETDRAIDFFAYMVSNGCMPNE 601



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 114/465 (24%), Positives = 197/465 (42%), Gaps = 36/465 (7%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G  +   G++ +LA  GC     ++   L+     + +G V E  DEM R    PN    
Sbjct: 195 GCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTF 254

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N ++  L + G  +   +VL +       P+   +   +  +CK   +    +++  M  
Sbjct: 255 NTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G  PNV  +  +L   C   R  EA +LL  M      L    + +L+D F +   +D 
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
              L E+M+ +GC P+V+TYT++I GF +  +   A   L  + S G  P+ V + +++ 
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLV 393
            L   G + DA ++   +++    P+  TF                              
Sbjct: 435 GLCSAGRWVDAEELMSQMIQQGCPPNPVTF------------------------------ 464

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
             N L+++ CK G   QA++L   ML  G +PD  S+  ++ GL  A K +EA+ +   +
Sbjct: 465 --NTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 522

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
           V    + N  ++++I   L   GR +K IQ+F          D V Y   I  L +   T
Sbjct: 523 VNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWET 582

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           + A   ++ M      PN  TY +++     E   K  + LL ++
Sbjct: 583 DRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSEL 627



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 93/376 (24%), Positives = 180/376 (47%), Gaps = 8/376 (2%)

Query: 78  DYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGM 137
           D   ++ +F+ +I  + R  G FE V  ++ +++  GC    + +   +    +     +
Sbjct: 246 DCAPNIVTFNTLIGYLCR-NGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEV 304

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE---TQLP-NFLSFNIALC 193
             E  + M  +G  PN    N V+  L    R     ++L E      P + ++FNI + 
Sbjct: 305 ANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVD 364

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
             C+   V  V +++  M+  G  P+V  +  ++N FCK G I EA  LL  M + G   
Sbjct: 365 FFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKP 424

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
           +  ++T+++ G     R   A  L  +M+Q GC PN VT+ +LI    +  +   A   L
Sbjct: 425 NTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELL 484

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
             +   G +PDL+ ++ +ID L K G  ++AL++ + ++   + P++  + S+   +   
Sbjct: 485 KQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSRE 544

Query: 374 GRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           GR + + ++   ++   + +D V+YNA++S  CK    ++A+  +  M+  G  P+  ++
Sbjct: 545 GRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTY 604

Query: 431 VGLLRGLCGARKIDEA 446
             L++GL       EA
Sbjct: 605 TMLIKGLASEGLAKEA 620



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 102/445 (22%), Positives = 201/445 (45%), Gaps = 35/445 (7%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D+ S++ ++  +  +  R+  V  ++ E+ RV C     TF   +    R  ++  V E 
Sbjct: 215 DIVSYNAVLKGLC-MAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEV 273

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDV 201
             +M   G TP+      ++D + K G +++  ++L   ++P++                
Sbjct: 274 LAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILN--RMPSY---------------- 315

Query: 202 SNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVL 261
                        G  PNV  +  +L   C   R  EA +LL  M      L    + +L
Sbjct: 316 -------------GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNIL 362

Query: 262 IDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH 321
           +D F +   +D    L E+M+ +GC P+V+TYT++I GF +  +   A   L  + S G 
Sbjct: 363 VDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGC 422

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPK 381
            P+ V + +++  L   G + DA ++   +++    P+  TF +L++ +C  G      +
Sbjct: 423 KPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE 482

Query: 382 LVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
           L+  + V     DL+ Y+ ++    KAG   +A++L N M++KG +P+   +  +   L 
Sbjct: 483 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALS 542

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
              ++++ I ++  I       +A ++ A++  L +     +AI  F   +      +  
Sbjct: 543 REGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNES 602

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQM 523
           +YT+ I+GL   G  +EA  L S++
Sbjct: 603 TYTMLIKGLASEGLAKEAQELLSEL 627



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/215 (23%), Positives = 90/215 (41%), Gaps = 4/215 (1%)

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
           ++  GC     ++ + L+       +    E   +M + G  PN    N +++ L K G 
Sbjct: 417 MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGL 476

Query: 170 VDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEI 225
           V+  I++LK+  +    P+ +S++  +  L K        +++ +MV KG  PN  ++  
Sbjct: 477 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSS 536

Query: 226 LLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
           +     + GR+ +  Q+   +           +  +I    +    D A   +  MV NG
Sbjct: 537 IACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNG 596

Query: 286 CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           C PN  TYT LIKG     +   A   L  L S G
Sbjct: 597 CMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/237 (18%), Positives = 98/237 (41%), Gaps = 3/237 (1%)

Query: 365 SLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
           +L+ ++C +GR +   + +      A +V YNA+++ +C+AG   Q              
Sbjct: 52  ALIRSLCSAGRTAEAARALADAGDAAGVVAYNAMVAGYCRAG---QLAAARRLAAAVPVP 108

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           P+ Y+F  ++RGLC   +I +A+ V   +     A    ++  I++    +G    ++++
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
                 +   LD  +  + +  + E G  +EA  L  ++       +  +Y  +L   C 
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 545 ERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            +    V+ L+ +++      +  T   L  ++ +          L +M   G  PD
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/510 (22%), Positives = 225/510 (44%), Gaps = 38/510 (7%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR      ++ E++  GC      + + L    R   +   +   + M   G T +T   
Sbjct: 125 GRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNC 184

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N+V++ + + G VD  + +L++        + +S+N  L  LC      +V++++  MVR
Sbjct: 185 NLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVR 244

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
               PN+  F  L+   C+ G     +++L  M   G +  +  +  +IDG  +   L++
Sbjct: 245 VDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEV 304

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL-DMLESEGHAPDLVFHNVLI 332
           A  +  +M   G  PNVV Y +++KG   A+ +  A   L +M + +    D+ F N+L+
Sbjct: 305 ANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTF-NILV 363

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADL 392
           D   + G  D  +++ + +L    +PD                                +
Sbjct: 364 DFFCQNGLVDRVIELLEQMLSHGCMPD--------------------------------V 391

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           + Y  +++ FCK G  ++AV L  +M   G  P+  S+  +L+GLC A +  +A  +   
Sbjct: 392 ITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQ 451

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           ++      N      +++ L + G   +AI+L ++ +V     D++SY+  I GL + G+
Sbjct: 452 MIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 511

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
           TEEA  L + M +  + PN   Y  +  +  +E  +  V ++  ++ D  I  D      
Sbjct: 512 TEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNA 571

Query: 573 LTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
           +   + K   +  A++    M + G +P+E
Sbjct: 572 VISSLCKRWETDRAIDFFAYMVSNGCMPNE 601



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 114/465 (24%), Positives = 197/465 (42%), Gaps = 36/465 (7%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G  +   G++ +LA  GC     ++   L+     + +G V E  DEM R    PN    
Sbjct: 195 GCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTF 254

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N ++  L + G  +   +VL +       P+   +   +  +CK   +    +++  M  
Sbjct: 255 NTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G  PNV  +  +L   C   R  EA +LL  M      L    + +L+D F +   +D 
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
              L E+M+ +GC P+V+TYT++I GF +  +   A   L  + S G  P+ V + +++ 
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLV 393
            L   G + DA ++   +++    P+  TF                              
Sbjct: 435 GLCSAGRWVDAEELMSQMIQQGCPPNPVTF------------------------------ 464

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
             N L+++ CK G   QA++L   ML  G +PD  S+  ++ GL  A K +EA+ +   +
Sbjct: 465 --NTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 522

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
           V    + N  ++++I   L   GR +K IQ+F          D V Y   I  L +   T
Sbjct: 523 VNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWET 582

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           + A   ++ M      PN  TY +++     E   K  + LL ++
Sbjct: 583 DRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSEL 627



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 93/376 (24%), Positives = 180/376 (47%), Gaps = 8/376 (2%)

Query: 78  DYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGM 137
           D   ++ +F+ +I  + R  G FE V  ++ +++  GC    + +   +    +     +
Sbjct: 246 DCAPNIVTFNTLIGYLCR-NGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEV 304

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE---TQLP-NFLSFNIALC 193
             E  + M  +G  PN    N V+  L    R     ++L E      P + ++FNI + 
Sbjct: 305 ANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVD 364

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
             C+   V  V +++  M+  G  P+V  +  ++N FCK G I EA  LL  M + G   
Sbjct: 365 FFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKP 424

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
           +  ++T+++ G     R   A  L  +M+Q GC PN VT+ +LI    +  +   A   L
Sbjct: 425 NTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELL 484

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
             +   G +PDL+ ++ +ID L K G  ++AL++ + ++   + P++  + S+   +   
Sbjct: 485 KQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSRE 544

Query: 374 GRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           GR + + ++   ++   + +D V+YNA++S  CK    ++A+  +  M+  G  P+  ++
Sbjct: 545 GRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTY 604

Query: 431 VGLLRGLCGARKIDEA 446
             L++GL       EA
Sbjct: 605 TMLIKGLASEGLAKEA 620



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 102/445 (22%), Positives = 201/445 (45%), Gaps = 35/445 (7%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D+ S++ ++  +  +  R+  V  ++ E+ RV C     TF   +    R  ++  V E 
Sbjct: 215 DIVSYNAVLKGLC-MAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEV 273

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDV 201
             +M   G TP+      ++D + K G +++  ++L   ++P++                
Sbjct: 274 LAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILN--RMPSY---------------- 315

Query: 202 SNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVL 261
                        G  PNV  +  +L   C   R  EA +LL  M      L    + +L
Sbjct: 316 -------------GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNIL 362

Query: 262 IDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH 321
           +D F +   +D    L E+M+ +GC P+V+TYT++I GF +  +   A   L  + S G 
Sbjct: 363 VDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGC 422

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPK 381
            P+ V + +++  L   G + DA ++   +++    P+  TF +L++ +C  G      +
Sbjct: 423 KPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE 482

Query: 382 LVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
           L+  + V     DL+ Y+ ++    KAG   +A++L N M++KG +P+   +  +   L 
Sbjct: 483 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALS 542

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
              ++++ I ++  I       +A ++ A++  L +     +AI  F   +      +  
Sbjct: 543 REGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNES 602

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQM 523
           +YT+ I+GL   G  +EA  L S++
Sbjct: 603 TYTMLIKGLASEGLAKEAQELLSEL 627



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/215 (23%), Positives = 90/215 (41%), Gaps = 4/215 (1%)

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
           ++  GC     ++ + L+       +    E   +M + G  PN    N +++ L K G 
Sbjct: 417 MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGL 476

Query: 170 VDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEI 225
           V+  I++LK+  +    P+ +S++  +  L K        +++ +MV KG  PN  ++  
Sbjct: 477 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSS 536

Query: 226 LLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
           +     + GR+ +  Q+   +           +  +I    +    D A   +  MV NG
Sbjct: 537 IACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNG 596

Query: 286 CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           C PN  TYT LIKG     +   A   L  L S G
Sbjct: 597 CMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/237 (18%), Positives = 98/237 (41%), Gaps = 3/237 (1%)

Query: 365 SLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
           +L+ ++C +GR +   + +      A +V YNA+++ +C+AG   Q              
Sbjct: 52  ALIRSLCSAGRTAEAARALADAGDAAGVVAYNAMVAGYCRAG---QLAAARRLAAAVPVP 108

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           P+ Y+F  ++RGLC   +I +A+ V   +     A    ++  I++    +G    ++++
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
                 +   LD  +  + +  + E G  +EA  L  ++       +  +Y  +L   C 
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 545 ERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            +    V+ L+ +++      +  T   L  ++ +          L +M   G  PD
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 136/529 (25%), Positives = 236/529 (44%), Gaps = 18/529 (3%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLR-IYWRGEMYGMVLEAFDEM-GRFGFTPN 153
           LTGR      ++  L+  GC  K   +   +R +Y  G  Y      FDEM GR  F P+
Sbjct: 153 LTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYN-ARHLFDEMLGRDVF-PD 210

Query: 154 TFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIG 209
               N V+  L + G V     L  KVLK     N  + NI +  LC   +   +++ + 
Sbjct: 211 VATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLC---EDGRLEEAVA 267

Query: 210 MMVRKGFY--PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
           ++ R G Y  P+V  +  L+   CK  ++ EA Q LG M+  G       +  +IDG+ +
Sbjct: 268 LVERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCK 327

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
              L  A  L +  V  G  P+ VTY SLI G         A    +  +++   PDLV 
Sbjct: 328 SGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVV 387

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE 387
           +N L+  L + G    AL V + ++E    PD +T+  +++ +C  G  S    ++    
Sbjct: 388 YNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAI 447

Query: 388 VEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
           V+    D+  +N L+  +CK    + A++L   M   G  PD  ++  +L GLC A K  
Sbjct: 448 VKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAK 507

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
           E    ++ +++     NA  +  +++   +  +  +A  +  R   +    D VS+   I
Sbjct: 508 EVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLI 567

Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
            G    G  + AY+L+ ++        A T+ +++ ++  + N++M +++  ++I    +
Sbjct: 568 HGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYK 627

Query: 565 LDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD--EMWRKLGLLS 611
            D +T   L   + K  +   A   L EM + G +P      R L LL+
Sbjct: 628 PDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLA 676



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 120/487 (24%), Positives = 211/487 (43%), Gaps = 57/487 (11%)

Query: 122 FLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV----L 177
           ++  ++ Y R       ++AF+ M  F   P   A N +MD L      D   KV    L
Sbjct: 74  YVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRML 133

Query: 178 KETQLPNFLSFNIALCNLC----------KLNDVS------------------------- 202
                P+  +  + L + C           L  +S                         
Sbjct: 134 AAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGY 193

Query: 203 NVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLI 262
           N + +   M+ +  +P+V  F  +L+  C+ G + E+  LL  ++  G S +     + I
Sbjct: 194 NARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWI 253

Query: 263 DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
            G     RL+ A  L E+M     +P+VVTY +L++G  +      A  +L  + ++G  
Sbjct: 254 RGLCEDGRLEEAVALVERMGAY-VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCI 312

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL 382
           PD   +N +ID   K G   +A ++    +    VPD  T+CSL++ +C  G      +L
Sbjct: 313 PDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALEL 372

Query: 383 ---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
                  +++ DLVVYN+L+   C+ G    A+++ N M+++G  PD +++  ++ GLC 
Sbjct: 373 FNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCK 432

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK-----AIQLFRRAIVEKYP 494
              I +A      +VMN+  V  ++        +  G C +     A+QL  R       
Sbjct: 433 MGNISDA-----AVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIA 487

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK----ERNIKM 550
            DV++Y   + GL + G+ +E    + +M      PNA TY +++ +FCK    E    +
Sbjct: 488 PDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGV 547

Query: 551 VKRLLQD 557
           + R+ QD
Sbjct: 548 IVRMCQD 554



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 94/401 (23%), Positives = 171/401 (42%), Gaps = 19/401 (4%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALC 193
            LE F+E       P+    N ++  L + G +   ++V+    +E   P+  ++NI + 
Sbjct: 369 ALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIIN 428

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
            LCK+ ++S+   V+   + KG+ P+V  F  L++ +CK  ++  A QL+  M T G + 
Sbjct: 429 GLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAP 488

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
            V  +  +++G  +  +       +E+M+  GC PN +TY  LI+ F +      A   +
Sbjct: 489 DVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVI 548

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
             +  +G  PD V  N LI    + G  D A  ++  L E      + TF  L+      
Sbjct: 549 VRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSK 608

Query: 374 GRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
               +  K+   +     + DL  Y  L+   CKA   ++A      M+ KGF P   +F
Sbjct: 609 LNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATF 668

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI------QL 484
             +L  L    ++ EA+ +    +M    V   V   +VD ++   +   A       +L
Sbjct: 669 GRMLNLLAMNHRVSEAVAIIH--IM----VRMGVVPEVVDTILSTDKKEIAAPKILVEEL 722

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKH 525
            ++  +     +V+   V    L    R  +A I++    H
Sbjct: 723 MKKGHISYRAYEVLHEGVRDNKLTRKARKADASIMFVSQHH 763



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 95/464 (20%), Positives = 179/464 (38%), Gaps = 43/464 (9%)

Query: 177 LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV--RMFEILLNCFCKMG 234
           L  + +P + +    L +  +L+DV    D      R    P+    ++   +  + + G
Sbjct: 30  LTASTIPAYRALIRELVSAGRLDDV----DAALASARSHLAPDSLQPLYVASIQAYARAG 85

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
           R+  A      M       +  A+  ++D        D A  ++ +M+  G +P+  T+T
Sbjct: 86  RLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHT 145

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
             +K F       +A   L  L   G       +  ++  L   G   +A  ++D +L  
Sbjct: 146 VRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGR 205

Query: 355 KLVPDSYTFCSLLSTVCLSGRF----SLLPKLV--------------------------- 383
            + PD  TF ++L  +C  G      +LL K++                           
Sbjct: 206 DVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEA 265

Query: 384 ------CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
                  G  V  D+V YN L+   CK     +A +    M+++G  PD++++  ++ G 
Sbjct: 266 VALVERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGY 325

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
           C +  + EA  + +  V      +   + ++++ L   G   +A++LF  A  +    D+
Sbjct: 326 CKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDL 385

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
           V Y   ++GL   G    A  + ++M      P+ +TY +++   CK  NI     ++ D
Sbjct: 386 VVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMND 445

Query: 558 VIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            I      D  T   L     K     SA+  +  M   G+ PD
Sbjct: 446 AIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPD 489



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 73/327 (22%), Positives = 126/327 (38%), Gaps = 24/327 (7%)

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT--FCSLLSTVCLSGR 375
           SE  A  +  +  LI  L   G  DD +D         L PDS    + + +     +GR
Sbjct: 28  SELTASTIPAYRALIRELVSAGRLDD-VDAALASARSHLAPDSLQPLYVASIQAYARAGR 86

Query: 376 -------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
                  F  +    C     A    YNA++     A + +QA K+Y  ML  G  PD  
Sbjct: 87  LRAAVDAFERMDLFACPPAAPA----YNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDAR 142

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
           +    L+  C   +   A+ + + +           +  +V  L   G  + A  LF   
Sbjct: 143 THTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEM 202

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
           +      DV ++   +  L + G   E+  L +++    +  N +T  + +   C++  +
Sbjct: 203 LGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRL 262

Query: 549 KMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM----- 603
           +    L++  + A +  D  T   L + + K      A   L  M N G IPD+      
Sbjct: 263 EEAVALVER-MGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTI 321

Query: 604 ---WRKLGLLSDET-MTPVSLFDGFVP 626
              + K G+L + T +   ++F GFVP
Sbjct: 322 IDGYCKSGMLQEATELLKDAVFKGFVP 348


>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 117/451 (25%), Positives = 215/451 (47%), Gaps = 20/451 (4%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET 180
           TF   L    R +M        +EM  +GF P+ F    + D   K G VD  I + +E 
Sbjct: 289 TFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEA 348

Query: 181 -----QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGR 235
                Q+ ++ + +I L  LCK  ++   ++V+   +  G  P    F  ++N +C++G 
Sbjct: 349 VRKGVQILDY-TCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGD 407

Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
           I +AY  +  M  +G   +   +  L+  F  ++ ++ A    +KMV+ G  PNV TY +
Sbjct: 408 INKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNT 467

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           LI G+  + +F   F  L+ +E +G  P+++ +  LI+CL K  +  +A  +   ++   
Sbjct: 468 LIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRG 527

Query: 356 LVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQA 411
           +VP++  +  L+   C++G+    F    ++V   E+   LV YN L++  CK G   +A
Sbjct: 528 VVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMV-AREIVPTLVTYNILINGLCKKGKVMEA 586

Query: 412 VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
             L + +  KG + D  ++  L+ G   A  + +A+ +Y+   M    +   ++T    R
Sbjct: 587 ENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYE--TMKKSGIKPTLNT--YHR 642

Query: 472 LIEAGRCHKAIQLFRRAIVEKYPLDVVS----YTVAIRGLLEGGRTEEAYILYSQMKHIA 527
           LI AG   + + L  +   E   +++V     Y   I   +E G  ++A  L+S M+   
Sbjct: 643 LI-AGCGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQG 701

Query: 528 VPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           + P+  TY  ++L   KE  +  VK L+ D+
Sbjct: 702 IQPDKMTYNCLILGHFKEGRMHKVKNLVNDM 732



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 96/448 (21%), Positives = 193/448 (43%), Gaps = 9/448 (2%)

Query: 124 LFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ-- 181
           + L I    +M     E +  M + G  P+  + N+ ++ L    R +  +++  E    
Sbjct: 117 MLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVES 176

Query: 182 --LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEA 239
              P+   +  A+    KL D+    +++  M R G  P V ++ +++   CK  R+ +A
Sbjct: 177 GLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDA 236

Query: 240 YQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG 299
            +L   M+    + +   +  LIDG+ ++ +L+ A  + E+M      P ++T+ SL+ G
Sbjct: 237 EKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNG 296

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
              A+M   A   L+ +E  G  PD   +  L D   K G+ D ++ + +  +   +   
Sbjct: 297 LCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQIL 356

Query: 360 SYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADL----VVYNALLSYFCKAGFPNQAVKLY 415
            YT   LL+ +C  G      +++    +E  L    V +N +++ +C+ G  N+A    
Sbjct: 357 DYTCSILLNALCKEGNMEKAEEVLKKF-LENGLAPVGVFFNTIVNGYCQVGDINKAYTTI 415

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
             M   G  P++ ++  L++  C  + ++EA    + +V      N   +  ++D    +
Sbjct: 416 EKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRS 475

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
               +  Q+      +    +V+SY   I  L +     EA ++   M H  V PNA  Y
Sbjct: 476 CLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIY 535

Query: 536 RVMLLSFCKERNIKMVKRLLQDVIDARI 563
            +++   C    +K   R   +++   I
Sbjct: 536 NMLIDGSCIAGKLKDAFRFFDEMVAREI 563



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 114/537 (21%), Positives = 222/537 (41%), Gaps = 49/537 (9%)

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
           + + G +    +  LFL      + Y   L+ F E+   G  P+ F     +    K+G 
Sbjct: 138 MKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGD 197

Query: 170 VDLGIKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEI 225
           +   I+++    +    P    +N+ +  LCK   + + + +   M+ +   PN   +  
Sbjct: 198 LKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNT 257

Query: 226 LLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
           L++ +CK+G++ EA+ +   M       ++  +  L++G  R + ++ A  + E+M   G
Sbjct: 258 LIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYG 317

Query: 286 CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL 345
             P+  TYT+L  G ++      + +  +    +G        ++L++ L K G+ + A 
Sbjct: 318 FVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAE 377

Query: 346 DVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYF 402
           +V    LE  L P    F ++++  C  G  +     +  +E   +  + V YN+L+  F
Sbjct: 378 EVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKF 437

Query: 403 C-----------------KAGFPNQAVKLYNTMLD--------------------KGFTP 425
           C                 K   PN  V+ YNT++D                    KG  P
Sbjct: 438 CEMKNMEEAEKCIKKMVEKGVLPN--VETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKP 495

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           +  S+  L+  LC    I EA  +   +V      NA ++  ++D    AG+   A + F
Sbjct: 496 NVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFF 555

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
              +  +    +V+Y + I GL + G+  EA  L S++    +  +  TY  ++  +   
Sbjct: 556 DEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSA 615

Query: 546 RNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLV-EMCNLGLIPD 601
            N++    L + +  + I+   +T  RL     K       V ++  EM  + L+PD
Sbjct: 616 GNVQKALELYETMKKSGIKPTLNTYHRLIAGCGK--EGLVLVEKIYQEMLQMNLVPD 670



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/385 (21%), Positives = 159/385 (41%), Gaps = 35/385 (9%)

Query: 100 FETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNI 159
            E     + ++   G +   +T+   +  Y R  ++    +  +EM + G  PN      
Sbjct: 443 MEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNV----- 497

Query: 160 VMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN 219
                                     +S+   +  LCK  ++   + ++G MV +G  PN
Sbjct: 498 --------------------------ISYGCLINCLCKDANILEAEVILGDMVHRGVVPN 531

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
            +++ +L++  C  G++ +A++    M+      ++  + +LI+G  +  ++  A  L  
Sbjct: 532 AQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLAS 591

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
           ++ + G S +V+TY SLI G+  A     A    + ++  G  P L  ++ LI    K G
Sbjct: 592 EITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEG 651

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYN 396
                  +Y  +L++ LVPD   + +L+      G       L   +E   ++ D + YN
Sbjct: 652 LV-LVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYN 710

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            L+    K G  ++   L N M  +G  P   ++  L+ G C  +  D A   Y+ +  N
Sbjct: 711 CLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFEN 770

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKA 481
               +  +   ++  L E GR H A
Sbjct: 771 GFTPSVSICDNLITGLREEGRSHDA 795



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 53/274 (19%), Positives = 111/274 (40%), Gaps = 33/274 (12%)

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           E+KM S +     +++ +G  P +   N+ ++ L     Y+D L ++  ++E  L PD +
Sbjct: 124 ESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQF 183

Query: 362 TFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
                                           +Y   +    K G   +A++L   M   
Sbjct: 184 --------------------------------MYGKAIQAAVKLGDLKRAIELMTCMKRG 211

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
           G +P  + +  ++ GLC  +++ +A  ++  ++    A N   +  ++D   + G+  +A
Sbjct: 212 GVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEA 271

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
             +  R  VE     ++++   + GL      EEA  +  +M+     P+ +TY  +   
Sbjct: 272 FNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDG 331

Query: 542 FCKERNIKMVKRLLQDVIDARIE-LDYHTSIRLT 574
             K  N+     L ++ +   ++ LDY  SI L 
Sbjct: 332 HLKCGNVDASITLSEEAVRKGVQILDYTCSILLN 365



 Score = 47.8 bits (112), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 46/213 (21%), Positives = 86/213 (40%), Gaps = 13/213 (6%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTP--NTF 155
           G+      +  E+ R G      T+   +  Y         LE ++ M + G  P  NT+
Sbjct: 581 GKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTY 640

Query: 156 ARNIVMDVLFKIGRVDLGI------KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIG 209
            R     ++   G+  L +      ++L+   +P+ + +N  +    +  DV     +  
Sbjct: 641 HR-----LIAGCGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHS 695

Query: 210 MMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLR 269
            M  +G  P+   +  L+    K GR+ +   L+  M   G       + +LI G  +L+
Sbjct: 696 AMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLK 755

Query: 270 RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
             D A   + +M +NG +P+V    +LI G  E
Sbjct: 756 DFDGAYVWYREMFENGFTPSVSICDNLITGLRE 788


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 112/467 (23%), Positives = 207/467 (44%), Gaps = 7/467 (1%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
           F+ M R    P T   + ++  + ++G     I +  + Q     P+  +F I +     
Sbjct: 43  FNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFH 102

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            +  +    ++  +++ G+ PN+  F  ++N FC  G I +A      ++  G       
Sbjct: 103 QSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFT 162

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  LI+G  +  ++  A +L ++M ++   PN+V Y++LI G  +    S A      + 
Sbjct: 163 YGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIG 222

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G   D V +N LID    +G + +   +   ++   + PD YTF  L+  +C  GR  
Sbjct: 223 ERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRIL 282

Query: 378 LLPKLVCGLEV---EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
               ++  +     + D+V YNAL+  +C     ++A +L+N M+ +G  PD  ++  L+
Sbjct: 283 EAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLI 342

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            G C  + +DEA+ +++ +   N       + +++D L  +GR     +L         P
Sbjct: 343 DGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQP 402

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
            DVV+Y + I  L + GR  EA  +   M    V PN  TY  M+  +C   N+ + K +
Sbjct: 403 PDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDI 462

Query: 555 LQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
              ++ + +E D      L     K      A+    EM +  LIPD
Sbjct: 463 FNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPD 509



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 117/483 (24%), Positives = 222/483 (45%), Gaps = 45/483 (9%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGR----VDLGIKVLKETQLPNFLSFNIALCNLCKLN 199
           ++G  G   +    N ++D    +GR      L  K+++E   P+  +FNI +  LCK  
Sbjct: 220 QIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEG 279

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
            +   + V+ MM ++G  P++  +  L+  +C    + EA +L   M+  G    V  + 
Sbjct: 280 RILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYN 339

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
           VLIDG+ + + +D A  L++++      P + +Y SLI G   +   S     LD +   
Sbjct: 340 VLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGS 399

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
              PD+V +N+LID L K G   +AL V   +++  + P+  T+ +++   CL    ++ 
Sbjct: 400 AQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVA 459

Query: 380 PKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
             +   +    +E D++ YN L++ +CK    ++A+ L+  M  K   PD  S+  L+ G
Sbjct: 460 KDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDG 519

Query: 437 LCGARKI-----------------------------------DEAINVYQGIVMNNPAVN 461
           LC   +I                                   D+AI++++ IV      +
Sbjct: 520 LCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV-EGIWPD 578

Query: 462 AHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYS 521
            + + AIVD L +  +   A    +  ++     +V +YT+ I  L + G   EA +L S
Sbjct: 579 FYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLS 638

Query: 522 QMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFH 581
           +M+    PP+A T+ +++    +       ++L +++I AR  ++   S+  +  +F F 
Sbjct: 639 KMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMI-ARGLVNIEKSLNQSHNVF-FP 696

Query: 582 SSS 584
           +SS
Sbjct: 697 ASS 699



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 119/485 (24%), Positives = 219/485 (45%), Gaps = 29/485 (5%)

Query: 136 GMVLEAFD---EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSF 188
           GM+ +A D    +   G+  + F    +++ L K G++   + +L+E +     PN + +
Sbjct: 139 GMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMY 198

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           +  +  LCK   VS+   +   +  +G   +   +  L++  C +GR  E  QLL  M+ 
Sbjct: 199 SALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVR 258

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
                    + +LID   +  R+  A  +   M + G  P++VTY +L++G+   +    
Sbjct: 259 ENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHE 318

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A    + +   G  PD++ +NVLID   K    D+A+ ++  L    LVP   ++ SL+ 
Sbjct: 319 ARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLID 378

Query: 369 TVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
            +C SGR S + KL+  +   A   D+V YN L+   CK G   +A+ +   M+ KG  P
Sbjct: 379 GLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKP 438

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMN---------NPAVNAHVHTAIVDRLIEAG 476
           +  ++  ++ G C    ++ A +++  +V +         N  +N +  T +VD      
Sbjct: 439 NIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVD------ 492

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
              +AI LF+    +    D+ SY   I GL   GR      L  +M      P+  TY 
Sbjct: 493 ---EAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYN 549

Query: 537 VMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNL 596
           ++L +FCK +       L + +++  I  D++T+  +   + K      A + L  +   
Sbjct: 550 ILLDAFCKTQPFDKAISLFRQIVEG-IWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMH 608

Query: 597 GLIPD 601
           G  P+
Sbjct: 609 GCSPN 613


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 114/493 (23%), Positives = 218/493 (44%), Gaps = 7/493 (1%)

Query: 117 IKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI-- 174
           +   T  + +  Y +   +  V     EM +    P+    N+++D  F+ G  +  +  
Sbjct: 154 VNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMAL 213

Query: 175 --KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCK 232
              ++ +   P  +++N  L  LC+        +V   M   G  P+VR F IL+  FC+
Sbjct: 214 VDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCR 273

Query: 233 MGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVT 292
           +G I EA ++   M   G    + +++ LI  F R  ++D A     +M   G  P+ V 
Sbjct: 274 VGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVI 333

Query: 293 YTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
           YT +I GF  A + S A    D +   G  PD+V +N L++ L K     DA  + + + 
Sbjct: 334 YTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMR 393

Query: 353 ELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPN 409
           E  + PD  TF +L+   C+ G+     +L   +    +  D+V YN L+   C+ G  +
Sbjct: 394 ERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLD 453

Query: 410 QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
           +A  L++ M  +   P++ ++  L+   C   ++++A      ++      N   + +I+
Sbjct: 454 KANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSII 513

Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
                +G   K  +  ++ +V K   D+++Y   I G ++  +  +A+ L + M+   V 
Sbjct: 514 KGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQ 573

Query: 530 PNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQ 589
           P+  TY +++  F    N++    + + +    IE D +T + +        +S  A   
Sbjct: 574 PDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQL 633

Query: 590 LVEMCNLGLIPDE 602
             EM   G  PD+
Sbjct: 634 HDEMLQRGFAPDD 646



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 111/467 (23%), Positives = 201/467 (43%), Gaps = 7/467 (1%)

Query: 100 FETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNI 159
           F+ V  ++ E+ +        T  + +   +R       +   D M   G  P     N 
Sbjct: 172 FDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNS 231

Query: 160 VMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG 215
           V+  L + G  D   +V KE       P+  SF I +   C++ ++     +   M  +G
Sbjct: 232 VLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRG 291

Query: 216 FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAG 275
             P++  F  L+  F + G++  A   L  M   G       +T++I GF R   +  A 
Sbjct: 292 IKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDAL 351

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
            + ++MV  GC P+VVTY +L+ G  + +    A   L+ +   G  PDL     LI   
Sbjct: 352 RVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGY 411

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADL 392
              G  D AL ++D +L  +L PD  T+ +L+  +C  G       L   +   E+  + 
Sbjct: 412 CIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNH 471

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           V Y+ L+   C+ G    A    + M++KG  P+  ++  +++G C +  + +     Q 
Sbjct: 472 VTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQK 531

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           +++N  + +   +  ++   I+  + H A +L      EK   DVV+Y + I G    G 
Sbjct: 532 MMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGN 591

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
            +EA  ++ +M    + P+ YTY  M+       N K   +L  +++
Sbjct: 592 VQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEML 638



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/366 (21%), Positives = 166/366 (45%), Gaps = 5/366 (1%)

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
           ++++  ++     P  R+F++L+  + +  +  EA++   L++     +   A   L+  
Sbjct: 71  REIVSSLLGSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAA 130

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
             R     +A   +  +  +    N  T   ++  + +A  F    + +  +E     PD
Sbjct: 131 LSRAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPD 190

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVC 384
           +V HNV++D   + G  + A+ + D ++   L P   T+ S+L  +C SG +    ++  
Sbjct: 191 VVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFK 250

Query: 385 GLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
            ++   V  D+  +  L+  FC+ G   +A+K+Y  M  +G  PD  SF  L+ GL   R
Sbjct: 251 EMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLI-GLFARR 309

Query: 442 -KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSY 500
            K+D A+   + +       +  ++T ++     AG    A+++    +      DVV+Y
Sbjct: 310 GKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTY 369

Query: 501 TVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
              + GL +  R  +A  L ++M+   VPP+  T+  ++  +C E  +    +L   +++
Sbjct: 370 NTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLN 429

Query: 561 ARIELD 566
            R+  D
Sbjct: 430 QRLRPD 435


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 120/485 (24%), Positives = 222/485 (45%), Gaps = 22/485 (4%)

Query: 86  FDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEM 145
           F+ + S V R T +++ V G    +   G      T  + +  Y R +    +L AF  +
Sbjct: 73  FNRLCSAVAR-TKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKK---LLFAFSVL 128

Query: 146 GR---FGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKL 198
           GR    G+ P+T   + +++     GRV   +    ++++  Q P+ ++ +  +  LC  
Sbjct: 129 GRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLK 188

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
             VS    +I  MV  GF P+   +  +LN  CK G  A A  L   M       SV  +
Sbjct: 189 GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQY 248

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
           +++ID   +    D A  L+ +M   G   +VVTY+SLI G      +      L  +  
Sbjct: 249 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG 308

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC------- 371
               PD+V  + LID   K G   +A ++Y+ ++   + PD+ T+ SL+   C       
Sbjct: 309 RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHE 368

Query: 372 LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
            +  F L+    C    E D+V Y+ L++ +CKA   +  ++L+  +  KG  P+  ++ 
Sbjct: 369 ANQMFDLMVSKGC----EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYN 424

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            L+ G C + K++ A  ++Q +V      +   +  ++D L + G  +KA+++F +    
Sbjct: 425 TLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKS 484

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
           +  L +  Y + I G+    + ++A+ L+  +    V P+  TY VM+   CK+ ++   
Sbjct: 485 RMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA 544

Query: 552 KRLLQ 556
             L +
Sbjct: 545 DMLFR 549



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 101/413 (24%), Positives = 188/413 (45%), Gaps = 39/413 (9%)

Query: 134 MYGMVLEAF---DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF----L 186
           + G V EA    D M  +GF P+      V++ L K G   L + + ++ +  N     +
Sbjct: 187 LKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVV 246

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
            ++I + +LCK     +   +   M  KG   +V  +  L+   C  G+  +  ++L  M
Sbjct: 247 QYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 306

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
           I       V  ++ LID F +  +L  A  L+ +M+  G +P+ +TY SLI GF +    
Sbjct: 307 IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCL 366

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
             A    D++ S+G  PD+V +++LI+   K    DD + ++  +    L+P++ T+   
Sbjct: 367 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITY--- 423

Query: 367 LSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
                                        N L+  FC++G  N A +L+  M+ +G  P 
Sbjct: 424 -----------------------------NTLVLGFCQSGKLNAAKELFQEMVSRGVPPS 454

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
             ++  LL GLC   ++++A+ +++ +  +   +   ++  I+  +  A +   A  LF 
Sbjct: 455 VVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFC 514

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
               +    DVV+Y V I GL + G   EA +L+ +MK     P+ +TY +++
Sbjct: 515 SLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/329 (24%), Positives = 148/329 (44%), Gaps = 5/329 (1%)

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           L+E M+Q+   P  + +  L       K + +   F   +E  G   D+    ++I+C  
Sbjct: 57  LFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYC 116

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV---CGLEVEADLV 393
           +      A  V     +L   PD+ TF +L++  CL GR S    LV     ++   DLV
Sbjct: 117 RKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLV 176

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
             + L++  C  G  ++A+ L + M++ GF PD  ++  +L  LC +     A+++++ +
Sbjct: 177 TVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM 236

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
              N   +   ++ ++D L + G    A+ LF    ++    DVV+Y+  I GL   G+ 
Sbjct: 237 EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKW 296

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
           ++   +  +M    + P+  T+  ++  F KE  +   K L  ++I   I  D  T   L
Sbjct: 297 DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 356

Query: 574 TKFIFKFHSSSSAVNQLVE-MCNLGLIPD 601
                K +    A NQ+ + M + G  PD
Sbjct: 357 IDGFCKENCLHEA-NQMFDLMVSKGCEPD 384


>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 630

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 132/552 (23%), Positives = 246/552 (44%), Gaps = 37/552 (6%)

Query: 18  ILKTIISFKSIHQISSPKVCATTHQDFPIILAPHIVHSTLLNCPSDLIALSFFIWCAKQR 77
           I  + +SF S  Q +     AT   +F     P  +  TL     +  AL    W +KQ 
Sbjct: 31  ISNSTLSFASTQQHT-----ATLSSNF----TPAQLLDTLRRQNDETAALRLLSWASKQP 81

Query: 78  DYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGM 137
           ++  +   ++ ++  + ++ G F +++ I+ E+  + C I     L+F+  Y + E+Y  
Sbjct: 82  NFRPNSSIYEEILRKLGKV-GSFNSMKDILQEMKGLDCQIDRGVLLIFIDSYAKFELYEE 140

Query: 138 VLEAFDEMG-RFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-----PNFLSFNIA 191
           +L   + M   FG   +T   N +++VL    ++ L ++ +  T +     P+  +FNI 
Sbjct: 141 ILCIVEVMEVEFGLALDTLLYNFLLNVLVDGNKLKL-VENVHSTMVSKGIKPDVSTFNIL 199

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           +  LCK + +     V+  M   G  P+ + F  L+  F + G +  A+++   M+  G 
Sbjct: 200 IKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGC 259

Query: 252 SLSVNAWTVLIDGFRRLRRLD----------------MAGYLWEKMVQNGCSPNVVTYTS 295
            ++     VL+ GF +  R++                MA  L+ +M   GC P+  TY  
Sbjct: 260 PVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNM 319

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           LI           A   L  +E  G A +++ +N LID   K    ++A +++D +    
Sbjct: 320 LIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQG 379

Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAV 412
           L  +S T+ +L+  +C S R     +L+  + +E    D   YN++L+YFC+ G   +A 
Sbjct: 380 LSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAA 439

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
            +  TM   G  PD  ++  L+ GLC A +++ A  + + I +    +  H +  ++  L
Sbjct: 440 DIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQAL 499

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL-EGGRTEEAYILYSQMKHIAVPPN 531
            +  R  +A++LFR    +    D  +Y +  RGL   GG   EA     +M      P 
Sbjct: 500 FKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSGGPIGEAVDFVIEMIEKGFLPE 559

Query: 532 AYTYRVMLLSFC 543
             ++ ++    C
Sbjct: 560 FSSFYMLAEGLC 571



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 86/377 (22%), Positives = 162/377 (42%), Gaps = 20/377 (5%)

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
           +  F PN  ++E +L    K+G       +L  M  L   +      + ID + +    +
Sbjct: 80  QPNFRPNSSIYEEILRKLGKVGSFNSMKDILQEMKGLDCQIDRGVLLIFIDSYAKFELYE 139

Query: 273 MAGYLWEKM-VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
               + E M V+ G + + + Y  L+   ++     +  +    + S+G  PD+   N+L
Sbjct: 140 EILCIVEVMEVEFGLALDTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNIL 199

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC----LSGRFSLLPKLV---C 384
           I  L K      A+ V + +    LVPD  TF +L+        + G F +  +++   C
Sbjct: 200 IKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGC 259

Query: 385 ------------GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
                       G   E  +    + +      G    A++LYN M +KG  PD +++  
Sbjct: 260 PVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNM 319

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           L+  LC   K+ EA+ + + + ++  A N   +  ++D   +  +  +A ++F +  ++ 
Sbjct: 320 LIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQG 379

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVK 552
              + V+Y   I GL +  R +EA  L  QM    + P+ +TY  ML  FC+E +I+   
Sbjct: 380 LSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAA 439

Query: 553 RLLQDVIDARIELDYHT 569
            ++Q +     E D  T
Sbjct: 440 DIVQTMTSNGCEPDIVT 456



 Score = 39.3 bits (90), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 35/168 (20%), Positives = 74/168 (44%), Gaps = 8/168 (4%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D+ ++  +I  + +  GR E    ++  +   G V+    +   ++  ++ +     +  
Sbjct: 453 DIVTYGTLIGGLCK-AGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRL 511

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIG-----RVDLGIKVLKETQLPNFLSFNIALCNLC 196
           F EM   G TP+ F   IV   L   G      VD  I+++++  LP F SF +    LC
Sbjct: 512 FREMEEKGNTPDAFTYKIVFRGLSNSGGPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGLC 571

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLG 244
            L+    +  ++ +++ K  +    +  +++  F K+ +  +A   LG
Sbjct: 572 SLSMEDTLIKLVDLVMEKANFSQNEV--VMIRGFLKIRKFQDALATLG 617


>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
 gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
          Length = 701

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 128/603 (21%), Positives = 254/603 (42%), Gaps = 46/603 (7%)

Query: 43  DFPIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFET 102
           + P +++P +V   L    +   AL+ F    +   Y H    F H++  +  +  +   
Sbjct: 3   ELPKVISPTLVLKLLKAEKNPNAALAIFDSACQHPGYAHPPFVFHHILRRL--MDPKLVV 60

Query: 103 VRGIVGELARVG-CVIKAQTFLLFLRIYWRGEMYGMVLEAFDEM-GRFGFTPNTFARNIV 160
             G + +L R   C       L  ++ Y +  M    L  F  M   FG  P   + N +
Sbjct: 61  HVGRIVDLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSM 120

Query: 161 MDVLFKIGR---VDLGIKVLKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
           ++   +  +    +L     +   + PN  ++NI +   CK       K ++  M   G 
Sbjct: 121 LNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGL 180

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
            P++  +  L+N   K G + +A +L   M   G +  V  + +LIDGF R      A  
Sbjct: 181 NPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANE 240

Query: 277 LWEKMV-QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
           +W++++ ++   P+V TY  +I G  +      +    + ++    +PDL   + +I  L
Sbjct: 241 IWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGL 300

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS------------------ 377
           SK G+++ A  V+  ++E  L PD  T+ ++LS +  +G+ +                  
Sbjct: 301 SKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCCNIV 360

Query: 378 ----LLPKLVCGLEVE---------------ADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
               L+  L+   +VE               AD   Y  L++  CK G+ N+A+++    
Sbjct: 361 SYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEA 420

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
            ++G   D +++  ++ GLC    +++A+ +   +  N   +N+HV  ++++  + A + 
Sbjct: 421 ENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKL 480

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            +AI + R    +     VVSY   I GL +  R  +AY+   +M    + P+  TY ++
Sbjct: 481 EEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLL 540

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGL 598
           +   C+   + M   L    I+ R++ D      +   +        A+    +M  +  
Sbjct: 541 IDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNC 600

Query: 599 IPD 601
           +PD
Sbjct: 601 VPD 603



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 104/527 (19%), Positives = 234/527 (44%), Gaps = 10/527 (1%)

Query: 83  VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF 142
           ++SF+ M++     + ++             G     QT+ + ++I  +   +       
Sbjct: 114 IRSFNSMLNAFIE-SNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLL 172

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKL 198
             M   G  P+  +   +++ L K G +   +++  E  +    P+ + +NI +    + 
Sbjct: 173 TWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRK 232

Query: 199 NDVSNVKDVIG-MMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            D     ++   ++     YP+V  + I++N  CK+G++ E+ ++   M     S  +  
Sbjct: 233 GDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFT 292

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           ++ +I G  +    + A  ++++M+++G SP+V TY +++ G       +  F   +++ 
Sbjct: 293 FSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVM- 351

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
           S+ +  ++V +N+LI  L      + A+  +  L E  L  DS T+  L++ +C +G  +
Sbjct: 352 SKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLN 411

Query: 378 LLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
              +++   E E    D   Y++++   CK G   QAV+L + M       +++ F  L+
Sbjct: 412 KALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLI 471

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            G   A K++EAI+V + +   + A     +  I++ L +A R   A    +  + E   
Sbjct: 472 NGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLK 531

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
            D+++Y++ I GL  G + + A  L+ Q  +  + P+   + +++   C  + + +   +
Sbjct: 532 PDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEI 591

Query: 555 LQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
              +       D  T   + + ++K      A+     +   GL PD
Sbjct: 592 FTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPD 638



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 106/488 (21%), Positives = 210/488 (43%), Gaps = 81/488 (16%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQL-PNFLSFNIAL 192
            +E FDEM   G  P+    NI++D   + G      ++  ++L E+ + P+  ++NI +
Sbjct: 203 AVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMI 262

Query: 193 CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
             LCKL  +    ++   M +    P++  F  +++   K G    A ++   MI  G S
Sbjct: 263 NGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLS 322

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
             V  +  ++ G  R  +L+    LW  M +N C  N+V+Y  LI+G ++ K    A  +
Sbjct: 323 PDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCC-NIVSYNMLIQGLLDNKKVEQAICY 381

Query: 313 LDML-----------------------------------ESEGHAPDLVFHNVLIDCLSK 337
             +L                                   E+EG   D   ++ ++  L K
Sbjct: 382 WQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCK 441

Query: 338 MGSYDDALD---------------VYDGLL-----------------ELK---LVPDSYT 362
            G  + A++               V++ L+                 E+K     P   +
Sbjct: 442 KGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVS 501

Query: 363 FCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
           + ++++ +C + RFS   L  K +    ++ D++ Y+ L+   C+    + A+ L++  +
Sbjct: 502 YNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCI 561

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
           +K   PD      ++ GLC A+K+D A+ ++  +   N   +   H  I++ L +AG C 
Sbjct: 562 NKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCV 621

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAY-ILYSQMKHIAVPPNAYTYRVM 538
           +A++++ R +      D++SY +  +GL    R  +A   LY  +    + PNA T+ V+
Sbjct: 622 EALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDR-GILPNAPTWNVL 680

Query: 539 LLSFCKER 546
           + +   ++
Sbjct: 681 VRAVVDDK 688



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/413 (23%), Positives = 194/413 (46%), Gaps = 22/413 (5%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           K+ +   D+ +F  MI  +++  G F     +  E+   G     +T+   L   +R   
Sbjct: 282 KKNEKSPDLFTFSSMIHGLSK-AGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGK 340

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI---KVLKETQL-PNFLSFNI 190
                E ++ M +     N  + N+++  L    +V+  I   ++L E  L  +  ++ +
Sbjct: 341 LNKCFELWNVMSKNNCC-NIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGL 399

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +  LCK   ++    ++     +G   +   +  +++  CK G + +A +L+  M    
Sbjct: 400 LINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNR 459

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
             L+ + +  LI+G+ R  +L+ A  +  +M    C+P VV+Y ++I G  +A+ FS A+
Sbjct: 460 RKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAY 519

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
             L  +  EG  PD++ +++LID L +    D AL+++   +  +L PD      ++  +
Sbjct: 520 LSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGL 579

Query: 371 CLSGR-------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           C + +       F+ + ++ C      DLV +N ++    KAG   +A+K+++ +L+ G 
Sbjct: 580 CTAQKVDVALEIFTQMRQVNC----VPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGL 635

Query: 424 TPDNYSFVGLLRGLCGARKIDEAIN-----VYQGIVMNNPAVNAHVHTAIVDR 471
            PD  S+    +GLC   ++ +AI      + +GI+ N P  N  V   + D+
Sbjct: 636 QPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAVVDDK 688



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/340 (21%), Positives = 135/340 (39%), Gaps = 36/340 (10%)

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
           L   G    + T+ L +    +       L   +E    G   +TFA + ++  L K G 
Sbjct: 385 LHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGM 444

Query: 170 VDLGIKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEI 225
           ++  ++++    K  +  N   FN  +    +   +     V+  M  K   P V  +  
Sbjct: 445 LEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNT 504

Query: 226 LLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
           ++N  CK  R ++AY  L  M+  G    +  +++LIDG  R  ++DMA  LW + +   
Sbjct: 505 IINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKR 564

Query: 286 CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL 345
             P++  +  +I G   A+   +A      +      PDLV HN +++ L K G   +AL
Sbjct: 565 LKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEAL 624

Query: 346 DVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKA 405
            ++D +LE  L PD                                ++ YN      C  
Sbjct: 625 KIWDRILEAGLQPD--------------------------------IISYNITFKGLCSC 652

Query: 406 GFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
              + A++     LD+G  P+  ++  L+R +   + + E
Sbjct: 653 ARVSDAIEFLYDALDRGILPNAPTWNVLVRAVVDDKPLME 692


>gi|356561416|ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 456

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/381 (27%), Positives = 186/381 (48%), Gaps = 5/381 (1%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P  + F   L  L K+   S    +   M  KG  PN+    IL+NCFC +G+++ ++ +
Sbjct: 50  PPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNILINCFCHLGQMSFSFSV 109

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           LG ++ LG   +    T L+ G      +  + +  +K+V  G   N V+Y +L+ G  +
Sbjct: 110 LGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQVSYGTLLNGLCK 169

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
                 A  FL M+E      ++V +N +ID L K    ++A D Y  +    + P+  T
Sbjct: 170 IGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVIT 229

Query: 363 FCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           + +L+   CL+G+    FSLL +++    +  ++  Y  L+   CK G   +A  L   M
Sbjct: 230 YTTLIGGFCLAGQLTGAFSLLNEMILK-NINPNVYTYAILIDALCKEGKVKEAKNLLAEM 288

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
             +G   D  ++  LL G C  + +D+A  ++  +       N + +TA++D L + GR 
Sbjct: 289 HYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRL 348

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
             A +LF+  +V+   +DV +Y V I GL + G  +EA  + S+M+     PN  T+ ++
Sbjct: 349 KDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNVVTFEII 408

Query: 539 LLSFCKERNIKMVKRLLQDVI 559
           + S  K+      ++LL ++I
Sbjct: 409 IRSLFKKDENDKAEKLLHEMI 429



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/364 (25%), Positives = 159/364 (43%), Gaps = 7/364 (1%)

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNI 190
           Y   +    +M   G  PN    NI+++    +G++        K+LK    PN ++   
Sbjct: 68  YSTAISLSKQMEVKGIEPNLVTLNILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTT 127

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +  LC   +V         +V +GF  N   +  LLN  CK+G    A + L ++    
Sbjct: 128 LMKGLCLKGEVQKSVHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSS 187

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
           T L+V  +  +IDG  + + ++ A   + +M   G  PNV+TYT+LI GF  A   + AF
Sbjct: 188 TGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAF 247

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
           S L+ +  +   P++  + +LID L K G   +A ++   +       D  T+ SLL   
Sbjct: 248 SLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGF 307

Query: 371 CLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           C +        L   ++   ++ +   Y AL+   CK G    A KL+  +L KG   D 
Sbjct: 308 CKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDV 367

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
            ++  ++ GLC    +DEA+ +   +  N    N      I+  L +     KA +L   
Sbjct: 368 CTYNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHE 427

Query: 488 AIVE 491
            I +
Sbjct: 428 MIAK 431



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 129/290 (44%), Gaps = 3/290 (1%)

Query: 287 SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALD 346
           +P +V +  ++    + K +S A S    +E +G  P+LV  N+LI+C   +G    +  
Sbjct: 49  TPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNILINCFCHLGQMSFSFS 108

Query: 347 VYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL---LPKLVCGLEVEADLVVYNALLSYFC 403
           V   +L+L   P++ T  +L+  +CL G           V     + + V Y  LL+  C
Sbjct: 109 VLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQVSYGTLLNGLC 168

Query: 404 KAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAH 463
           K G    A+K    + D     +   +  ++ GLC  + ++EA + Y  +       N  
Sbjct: 169 KIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVI 228

Query: 464 VHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM 523
            +T ++     AG+   A  L    I++    +V +Y + I  L + G+ +EA  L ++M
Sbjct: 229 TYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEM 288

Query: 524 KHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
            +   P +  TY  +L  FCK +N+     L   + +  I+ + +T   L
Sbjct: 289 HYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTAL 338



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 122/286 (42%), Gaps = 15/286 (5%)

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV---EADLVVYNAL 398
           DDA+  ++G+L +   P    F  +L  +     +S    L   +EV   E +LV  N L
Sbjct: 34  DDAISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNIL 93

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           ++ FC  G  + +  +   +L  G+ P+  +   L++GLC   ++ ++++ +  +V    
Sbjct: 94  INCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGF 153

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
            +N   +  +++ L + G    AI+  R        L+VV Y   I GL +     EAY 
Sbjct: 154 QMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYD 213

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
            YS+M    + PN  TY  ++  FC    +     LL ++I   I  + +T   L   + 
Sbjct: 214 FYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALC 273

Query: 579 KFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTPVSLFDGF 624
           K      A N L EM   G   D             +T  SL DGF
Sbjct: 274 KEGKVKEAKNLLAEMHYRGQPAD------------VVTYTSLLDGF 307



 Score = 45.8 bits (107), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 35/157 (22%), Positives = 66/157 (42%), Gaps = 4/157 (2%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G+ +  + ++ E+   G      T+   L  + + +        F +M  +G  PN +  
Sbjct: 276 GKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTY 335

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQLP----NFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
             ++D L K GR+    K+ ++  +     +  ++N+ +  LCK   +     +   M  
Sbjct: 336 TALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKMED 395

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            G  PNV  FEI++    K     +A +LL  MI  G
Sbjct: 396 NGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEMIAKG 432


>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 125/477 (26%), Positives = 217/477 (45%), Gaps = 14/477 (2%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEM-GRFGFTPNTF 155
           +G F T+  +   + R   V   + F+L  R Y +  +    +E F  M   F       
Sbjct: 77  SGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVR 136

Query: 156 ARNIVMDVLFKIGRVDLGIKVL------KETQLPNFLSFNIALCNLCKLNDVSNVKDVIG 209
           + N V++V+ + G     ++        K    PN LSFN+ +  +CKL  V    +V  
Sbjct: 137 SFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFR 196

Query: 210 MMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLR 269
            M  +   P+V  +  L++  CK  RI EA  LL  M   G   S   + VLI+G  +  
Sbjct: 197 EMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKG 256

Query: 270 RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHN 329
            +     L + M   GC PN VTY ++I G         A S LD + +    P+ V + 
Sbjct: 257 DMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYG 316

Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCG 385
            LI+ L K G   D + +   L E     + Y + +L+S +    +      L  K+V  
Sbjct: 317 TLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMV-E 375

Query: 386 LEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
              + ++VVY+AL+   C+ G  ++A ++   M++KG TP+ +++  L++G        +
Sbjct: 376 KGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQK 435

Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
           AI V++ +  NN   N   ++ ++  L E G+  +A+ ++   +      DVV+Y+  I 
Sbjct: 436 AIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIH 495

Query: 506 GLLEGGRTEEAYILYSQM--KHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
           GL   G  E    L+++M  +     P+  TY ++L + CK+ +I     LL  ++D
Sbjct: 496 GLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLD 552



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 118/479 (24%), Positives = 208/479 (43%), Gaps = 66/479 (13%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET 180
           +F L ++   +  +    +E F EM      P+ F    +MD L K  R+D  + +L E 
Sbjct: 174 SFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEM 233

Query: 181 QL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
           Q+    P+ ++FN+ +  LCK  D+  V  ++  M  KG  PN   +  ++N  C  G++
Sbjct: 234 QIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKL 293

Query: 237 AEAYQLLGLMI---------TLGTSL--------SVN------------------AWTVL 261
            +A  LL  M+         T GT +        SV+                  A++ L
Sbjct: 294 DKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTL 353

Query: 262 IDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH 321
           I G  +  + + A  LW+KMV+ GC PN+V Y++LI G         A   L  + ++G 
Sbjct: 354 ISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGC 413

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---L 378
            P+   ++ LI    K G+   A+ V+  + +   VP+   +  L+  +C  G+     +
Sbjct: 414 TPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMM 473

Query: 379 LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTML--DKGFTPDNYSFVGLLRG 436
           +   + G  +  D+V Y++++   C AG     +KL+N ML  +    PD  ++  LLR 
Sbjct: 474 MWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRA 533

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY--P 494
           LC    I  AI++   ++  +   N  + T                 +F  A+ EK   P
Sbjct: 534 LCKQNSISHAIDLLNSML--DRGCNPDLITC---------------NIFLNALREKLNPP 576

Query: 495 LDVVSY--TVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
            D   +   + +R L +  R   A  +   M    +PPNA T+  ++   CK + ++ +
Sbjct: 577 QDGREFLDELVVR-LHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQAI 634



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 78/333 (23%), Positives = 158/333 (47%), Gaps = 6/333 (1%)

Query: 277 LWEKMVQN-GCSPNVVTYTSLIKGFMEAKMFSIAFSFLD--MLESEGHAPDLVFHNVLID 333
           L+ +MV    C   V ++ S++   ++  +F  A  F +  +      +P+++  N++I 
Sbjct: 121 LFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIK 180

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA--- 390
            + K+G  D A++V+  +   K  PD +T+C+L+  +C   R      L+  +++E    
Sbjct: 181 AMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFP 240

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
             V +N L++  CK G   +  KL + M  KG  P+  ++  ++ GLC   K+D+A+++ 
Sbjct: 241 SSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLL 300

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
             +V +    N   +  +++ L++ GR    + L        +  +  +Y+  I GL + 
Sbjct: 301 DRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKE 360

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
            ++EEA  L+ +M      PN   Y  ++   C+E  +   K +L ++++     +  T 
Sbjct: 361 EKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTY 420

Query: 571 IRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
             L K  FK  +S  A+    EM     +P+E+
Sbjct: 421 SSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEI 453



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 156/331 (47%), Gaps = 11/331 (3%)

Query: 106 IVGELARVGCVIKAQTFLLFLR-IYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVL 164
           ++ E+   GC   + TF + +  +  +G+M   V +  D M   G  PN    N +++ L
Sbjct: 229 LLDEMQIEGCFPSSVTFNVLINGLCKKGDMV-RVTKLVDNMFLKGCVPNEVTYNTIINGL 287

Query: 165 FKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV 220
              G++D  + +L        +PN +++   +  L K     +   ++  +  +G + N 
Sbjct: 288 CLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANE 347

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
             +  L++   K  +  EA  L   M+  G   ++  ++ LIDG  R  +LD A  +  +
Sbjct: 348 YAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCE 407

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           MV  GC+PN  TY+SLIKGF +      A      +      P+ + ++VLI  L + G 
Sbjct: 408 MVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGK 467

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCG-LEVEADLVVY 395
             +A+ ++  +L   L PD   + S++  +C +G       L  +++C   + + D+V Y
Sbjct: 468 LREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTY 527

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
           N LL   CK    + A+ L N+MLD+G  PD
Sbjct: 528 NILLRALCKQNSISHAIDLLNSMLDRGCNPD 558



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 137/306 (44%), Gaps = 17/306 (5%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNV 204
           G   N +A + ++  LFK  + +    L  K++++   PN + ++  +  LC+   +   
Sbjct: 342 GHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEA 401

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
           K+++  MV KG  PN   +  L+  F K G   +A ++   M       +   ++VLI G
Sbjct: 402 KEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHG 461

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS-FLDMLESEGHA- 322
                +L  A  +W  M+  G  P+VV Y+S+I G   A    +    F +ML  E  + 
Sbjct: 462 LCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQ 521

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL 382
           PD+V +N+L+  L K  S   A+D+ + +L+    PD  T    L+ +    R  L P  
Sbjct: 522 PDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNAL----REKLNPPQ 577

Query: 383 VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
             G E   +LVV         K      A K+   ML K   P+  ++  ++  LC  +K
Sbjct: 578 D-GREFLDELVV------RLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKK 630

Query: 443 IDEAIN 448
           +   I+
Sbjct: 631 VQAIID 636



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 120/273 (43%), Gaps = 31/273 (11%)

Query: 297 IKGFMEAKMFSIAFSF-----LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGL 351
           I+   +   F   FSF     L   ES+   PD +F +      S+MGSY          
Sbjct: 16  IRNLCKFPYFCWFFSFRSKTTLSPYESDAPIPDQIFKSA-----SQMGSYKSG------- 63

Query: 352 LELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYF---CKAGFP 408
                  DS TF SL+     SG F  L ++   ++ E  + +    +  F    KA  P
Sbjct: 64  -------DS-TFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLP 115

Query: 409 NQAVKLYNTMLDKGFTPDNY-SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV--H 465
            +A++L+  M+D+        SF  +L  +        A+  Y+  V     ++ +V   
Sbjct: 116 EKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSF 175

Query: 466 TAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKH 525
             ++  + + G   +AI++FR   ++K   DV +Y   + GL +  R +EA +L  +M+ 
Sbjct: 176 NLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQI 235

Query: 526 IAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
               P++ T+ V++   CK+ ++  V +L+ ++
Sbjct: 236 EGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNM 268



 Score = 46.2 bits (108), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 46/216 (21%), Positives = 92/216 (42%), Gaps = 24/216 (11%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLR-IYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           TG  +    +  E+A+  CV     + + +  +   G++   ++     +GR G  P+  
Sbjct: 430 TGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGR-GLRPDVV 488

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKE------TQLPNFLSFNIALCNLCKLNDVSNVKDVIG 209
           A + ++  L   G V++G+K+  E         P+ +++NI L  LCK N +S+  D++ 
Sbjct: 489 AYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLN 548

Query: 210 MMVRKGFYPNVRMFEILLNCF-CKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRL 268
            M+ +G  P++    I LN    K+    +  + L  ++                   + 
Sbjct: 549 SMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVR---------------LHKR 593

Query: 269 RRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
           +R+  A  + E M+Q    PN  T+  +I    + K
Sbjct: 594 QRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPK 629


>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 125/477 (26%), Positives = 217/477 (45%), Gaps = 14/477 (2%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEM-GRFGFTPNTF 155
           +G F T+  +   + R   V   + F+L  R Y +  +    +E F  M   F       
Sbjct: 93  SGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVR 152

Query: 156 ARNIVMDVLFKIGRVDLGIKVL------KETQLPNFLSFNIALCNLCKLNDVSNVKDVIG 209
           + N V++V+ + G     ++        K    PN LSFN+ +  +CKL  V    +V  
Sbjct: 153 SFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFR 212

Query: 210 MMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLR 269
            M  +   P+V  +  L++  CK  RI EA  LL  M   G   S   + VLI+G  +  
Sbjct: 213 EMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKG 272

Query: 270 RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHN 329
            +     L + M   GC PN VTY ++I G         A S LD + +    P+ V + 
Sbjct: 273 DMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYG 332

Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCG 385
            LI+ L K G   D + +   L E     + Y + +L+S +    +      L  K+V  
Sbjct: 333 TLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMV-E 391

Query: 386 LEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
              + ++VVY+AL+   C+ G  ++A ++   M++KG TP+ +++  L++G        +
Sbjct: 392 KGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQK 451

Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
           AI V++ +  NN   N   ++ ++  L E G+  +A+ ++   +      DVV+Y+  I 
Sbjct: 452 AIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIH 511

Query: 506 GLLEGGRTEEAYILYSQM--KHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
           GL   G  E    L+++M  +     P+  TY ++L + CK+ +I     LL  ++D
Sbjct: 512 GLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLD 568



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 118/479 (24%), Positives = 208/479 (43%), Gaps = 66/479 (13%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET 180
           +F L ++   +  +    +E F EM      P+ F    +MD L K  R+D  + +L E 
Sbjct: 190 SFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEM 249

Query: 181 QL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
           Q+    P+ ++FN+ +  LCK  D+  V  ++  M  KG  PN   +  ++N  C  G++
Sbjct: 250 QIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKL 309

Query: 237 AEAYQLLGLMI---------TLGTSL--------SVN------------------AWTVL 261
            +A  LL  M+         T GT +        SV+                  A++ L
Sbjct: 310 DKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTL 369

Query: 262 IDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH 321
           I G  +  + + A  LW+KMV+ GC PN+V Y++LI G         A   L  + ++G 
Sbjct: 370 ISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGC 429

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---L 378
            P+   ++ LI    K G+   A+ V+  + +   VP+   +  L+  +C  G+     +
Sbjct: 430 TPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMM 489

Query: 379 LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTML--DKGFTPDNYSFVGLLRG 436
           +   + G  +  D+V Y++++   C AG     +KL+N ML  +    PD  ++  LLR 
Sbjct: 490 MWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRA 549

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY--P 494
           LC    I  AI++   ++  +   N  + T                 +F  A+ EK   P
Sbjct: 550 LCKQNSISHAIDLLNSML--DRGCNPDLITC---------------NIFLNALREKLNPP 592

Query: 495 LDVVSY--TVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
            D   +   + +R L +  R   A  +   M    +PPNA T+  ++   CK + ++ +
Sbjct: 593 QDGREFLDELVVR-LHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQAI 650



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 78/333 (23%), Positives = 158/333 (47%), Gaps = 6/333 (1%)

Query: 277 LWEKMVQN-GCSPNVVTYTSLIKGFMEAKMFSIAFSFLD--MLESEGHAPDLVFHNVLID 333
           L+ +MV    C   V ++ S++   ++  +F  A  F +  +      +P+++  N++I 
Sbjct: 137 LFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIK 196

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA--- 390
            + K+G  D A++V+  +   K  PD +T+C+L+  +C   R      L+  +++E    
Sbjct: 197 AMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFP 256

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
             V +N L++  CK G   +  KL + M  KG  P+  ++  ++ GLC   K+D+A+++ 
Sbjct: 257 SSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLL 316

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
             +V +    N   +  +++ L++ GR    + L        +  +  +Y+  I GL + 
Sbjct: 317 DRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKE 376

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
            ++EEA  L+ +M      PN   Y  ++   C+E  +   K +L ++++     +  T 
Sbjct: 377 EKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTY 436

Query: 571 IRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
             L K  FK  +S  A+    EM     +P+E+
Sbjct: 437 SSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEI 469



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 156/331 (47%), Gaps = 11/331 (3%)

Query: 106 IVGELARVGCVIKAQTFLLFLR-IYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVL 164
           ++ E+   GC   + TF + +  +  +G+M   V +  D M   G  PN    N +++ L
Sbjct: 245 LLDEMQIEGCFPSSVTFNVLINGLCKKGDMV-RVTKLVDNMFLKGCVPNEVTYNTIINGL 303

Query: 165 FKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV 220
              G++D  + +L        +PN +++   +  L K     +   ++  +  +G + N 
Sbjct: 304 CLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANE 363

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
             +  L++   K  +  EA  L   M+  G   ++  ++ LIDG  R  +LD A  +  +
Sbjct: 364 YAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCE 423

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           MV  GC+PN  TY+SLIKGF +      A      +      P+ + ++VLI  L + G 
Sbjct: 424 MVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGK 483

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCG-LEVEADLVVY 395
             +A+ ++  +L   L PD   + S++  +C +G       L  +++C   + + D+V Y
Sbjct: 484 LREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTY 543

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
           N LL   CK    + A+ L N+MLD+G  PD
Sbjct: 544 NILLRALCKQNSISHAIDLLNSMLDRGCNPD 574



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 137/306 (44%), Gaps = 17/306 (5%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNV 204
           G   N +A + ++  LFK  + +    L  K++++   PN + ++  +  LC+   +   
Sbjct: 358 GHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEA 417

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
           K+++  MV KG  PN   +  L+  F K G   +A ++   M       +   ++VLI G
Sbjct: 418 KEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHG 477

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS-FLDMLESEGHA- 322
                +L  A  +W  M+  G  P+VV Y+S+I G   A    +    F +ML  E  + 
Sbjct: 478 LCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQ 537

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL 382
           PD+V +N+L+  L K  S   A+D+ + +L+    PD  T    L+ +    R  L P  
Sbjct: 538 PDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNAL----REKLNPPQ 593

Query: 383 VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
             G E   +LVV         K      A K+   ML K   P+  ++  ++  LC  +K
Sbjct: 594 D-GREFLDELVV------RLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKK 646

Query: 443 IDEAIN 448
           +   I+
Sbjct: 647 VQAIID 652



 Score = 46.2 bits (108), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 46/216 (21%), Positives = 92/216 (42%), Gaps = 24/216 (11%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLR-IYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           TG  +    +  E+A+  CV     + + +  +   G++   ++     +GR G  P+  
Sbjct: 446 TGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGR-GLRPDVV 504

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKE------TQLPNFLSFNIALCNLCKLNDVSNVKDVIG 209
           A + ++  L   G V++G+K+  E         P+ +++NI L  LCK N +S+  D++ 
Sbjct: 505 AYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLN 564

Query: 210 MMVRKGFYPNVRMFEILLNCF-CKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRL 268
            M+ +G  P++    I LN    K+    +  + L  ++                   + 
Sbjct: 565 SMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVR---------------LHKR 609

Query: 269 RRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
           +R+  A  + E M+Q    PN  T+  +I    + K
Sbjct: 610 QRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPK 645


>gi|218200292|gb|EEC82719.1| hypothetical protein OsI_27404 [Oryza sativa Indica Group]
          Length = 665

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 131/564 (23%), Positives = 240/564 (42%), Gaps = 45/564 (7%)

Query: 48  LAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIV 107
           L P +V+  L       +A+ F+ W   +  ++H+  +  ++IS++  +   F  +   +
Sbjct: 90  LDPFVVNKVLRGLSDSGMAVRFYWWAESRPGFYHNNFAIAYIISLLF-VDDNFALLLEFL 148

Query: 108 GELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEM-----GRFGFTPNTFARNIVMD 162
           G +   G       + + L  Y R   +  V+E FDEM       FG   N F   ++ +
Sbjct: 149 GRVRSQGVAFHRSLYRVLLAGYARAGKFDSVIETFDEMVTSGCREFGVDYNRFIGVMIKN 208

Query: 163 VLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
             F +      + + K   L  F +++  +  LC+ N +  V++++  M + G +P+   
Sbjct: 209 CCFDLVEKYYNMALAKGFCLTPF-TYSRWITALCQSNRIELVEELLTDMDKFGCFPDFWA 267

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
             I ++  C   R+ +A Q++                                   EKM 
Sbjct: 268 CNIYVHYLCGHNRLYDALQMV-----------------------------------EKMT 292

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
             G  P+VVTYT+++    + + FS A    + +   G  PD+V    LI  L K    D
Sbjct: 293 MKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRGLKPDVVACGALIFGLCKNQKVD 352

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALL 399
           +A ++   +L L +  +   + +L+S    +G      K V  ++    E D+V YN LL
Sbjct: 353 EAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYNILL 412

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
           +++C  G  ++A  L   M   G  PD YS+  LL+GLC A ++D+A       +     
Sbjct: 413 NHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCKAHQLDKAFAFVSDHMEVGGF 472

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            +      ++D    A + + A+ LF+    +    D V+Y + I GL   G +  A  L
Sbjct: 473 CDIVSCNILIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGILINGLFGIGYSNLAEEL 532

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK 579
           + QM +  + PN   Y +ML + CK  + K  +++   +    +  D  T   L  ++ K
Sbjct: 533 FDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTVTFNTLIYWLGK 592

Query: 580 FHSSSSAVNQLVEMCNLGLIPDEM 603
              +  A++   EM   G+ PD +
Sbjct: 593 SSRAVEALDLFKEMRTKGVEPDNL 616



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/441 (24%), Positives = 192/441 (43%), Gaps = 36/441 (8%)

Query: 137 MVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIAL 192
           +V E   +M +FG  P+ +A NI +  L    R+   ++++++  +    P+ +++   +
Sbjct: 248 LVEELLTDMDKFGCFPDFWACNIYVHYLCGHNRLYDALQMVEKMTMKGTGPDVVTYTTVV 307

Query: 193 CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
             LC     S    +   MVR+G  P+V     L+   CK  ++ EA++L   M+TL   
Sbjct: 308 SCLCDHRRFSEAVGLWEEMVRRGLKPDVVACGALIFGLCKNQKVDEAFELASRMLTLDIQ 367

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
           L+V+ +  LI GF R   ++ A      M +NGC P+VVTY  L+  +    M   A + 
Sbjct: 368 LNVSIYNALISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENL 427

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
           +  +E  G  PD   +N+L+  L K    D A       +E+        FC        
Sbjct: 428 IRKMEMSGVNPDRYSYNILLKGLCKAHQLDKAFAFVSDHMEVG------GFC-------- 473

Query: 373 SGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
                             D+V  N L+  FC+A   N A+ L+  M  KG   D  ++  
Sbjct: 474 ------------------DIVSCNILIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGI 515

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           L+ GL G    + A  ++  ++      N +V+  ++  L + G    A ++F +   ++
Sbjct: 516 LINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKE 575

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVK 552
              D V++   I  L +  R  EA  L+ +M+   V P+  T+R ++     E    +  
Sbjct: 576 VSPDTVTFNTLIYWLGKSSRAVEALDLFKEMRTKGVEPDNLTFRYIISGLLDEGKATLAY 635

Query: 553 RLLQDVIDARIELDYHTSIRL 573
            + + +++  I LD   S RL
Sbjct: 636 EIWEYMMENGIILDRDVSERL 656



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/282 (20%), Positives = 117/282 (41%), Gaps = 5/282 (1%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           +V  ++ +IS   R  G  E     V  + R GC     T+ + L  Y    M       
Sbjct: 369 NVSIYNALISGFWR-AGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENL 427

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
             +M   G  P+ ++ NI++  L K  ++D     + +        + +S NI +   C+
Sbjct: 428 IRKMEMSGVNPDRYSYNILLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCR 487

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              V++  ++   M  KG   +   + IL+N    +G    A +L   M+      +VN 
Sbjct: 488 AKKVNSALNLFKEMGYKGIQADAVTYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNV 547

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           + +++    ++     A  ++ +M Q   SP+ VT+ +LI    ++     A      + 
Sbjct: 548 YNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAVEALDLFKEMR 607

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
           ++G  PD +    +I  L   G    A ++++ ++E  ++ D
Sbjct: 608 TKGVEPDNLTFRYIISGLLDEGKATLAYEIWEYMMENGIILD 649


>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
          Length = 661

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 130/557 (23%), Positives = 243/557 (43%), Gaps = 19/557 (3%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
           A+ FF +  + R ++  V   + +I V  R+  R +    +  ++      +   +F + 
Sbjct: 90  AIDFFDYMVRSRPFYTAVDC-NKVIGVFVRMN-RPDVAISLYRKMEIRRIPLNIYSFNIL 147

Query: 126 LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV---LKETQ- 181
           ++ +         L  F ++ + GF P+    N ++  L    R+   + +   + ET  
Sbjct: 148 IKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGS 207

Query: 182 ----------LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFC 231
                      P  ++FN  +  LC    V     ++  MV KG + +V  +  ++N  C
Sbjct: 208 LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMC 267

Query: 232 KMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVV 291
           KMG    A  LL  M        V  ++ +ID   +      A YL+ +M++ G +PNV 
Sbjct: 268 KMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF 327

Query: 292 TYTSLIKGFMEAKMFSIAFSFL-DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDG 350
           TY  +I GF     +S A   L DM+E E + PD++  N LI    K G   +A  + D 
Sbjct: 328 TYNCMIDGFCSFGRWSDAQRLLRDMIEREIN-PDVLTFNALISASVKEGKLFEAEKLCDE 386

Query: 351 LLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQ 410
           +L   + PD+ T+ S++   C   RF    K +  L    D+V +N ++  +C+A   ++
Sbjct: 387 MLHRCIFPDTVTYNSMIYGFCKHNRFDD-AKHMFDLMASPDVVTFNTIIDVYCRAKRVDE 445

Query: 411 AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
            ++L   +  +G   +  ++  L+ G C    ++ A +++Q ++ +    +      ++ 
Sbjct: 446 GMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLY 505

Query: 471 RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
              E  +  +A++LF    + K  LD V+Y + I G+ +G + +EA+ L+  +    V P
Sbjct: 506 GFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEP 565

Query: 531 NAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQL 590
           +  TY VM+  FC +  I     L   + D   E D  T   L +   K      ++  +
Sbjct: 566 DVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELI 625

Query: 591 VEMCNLGLIPDEMWRKL 607
            EM + G   D    K+
Sbjct: 626 SEMRSNGFSGDAFTIKM 642



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 90/347 (25%), Positives = 159/347 (45%), Gaps = 12/347 (3%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK---ETQL-PNFLSFNIALCNLCK 197
           F EM   G  PN F  N ++D     GR     ++L+   E ++ P+ L+FN  +    K
Sbjct: 314 FSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVK 373

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              +   + +   M+ +  +P+   +  ++  FCK  R  +A  +  LM     S  V  
Sbjct: 374 EGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVT 429

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  +ID + R +R+D    L  ++ + G   N  TY +LI GF E    + A      + 
Sbjct: 430 FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 489

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
           S G  PD +  N+L+    +    ++AL++++ +   K+  D+  +  ++  +C   +  
Sbjct: 490 SHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVD 549

Query: 378 LLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
               L C L    VE D+  YN ++S FC     + A  L++ M D G  PDN ++  L+
Sbjct: 550 EAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 609

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
           RG   A +ID++I +   +  N  + +A     + D LI  GR  K+
Sbjct: 610 RGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD-LITDGRLDKS 655



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 115/503 (22%), Positives = 206/503 (40%), Gaps = 71/503 (14%)

Query: 108 GELARVGCVIKAQTFLLFL-------RIYWRGEMYGMVLEA---FDEMGRFGFTPNTFAR 157
           G+L ++G      TF   L       RI     ++G ++E    FD+M   G TP     
Sbjct: 165 GKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITF 224

Query: 158 NIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N +++ L   GRV     L  K++ +    + +++   +  +CK+ D  +  +++  M  
Sbjct: 225 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 284

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
               P+V ++  +++  CK G  ++A  L   M+  G + +V  +  +IDGF    R   
Sbjct: 285 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 344

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFM-EAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
           A  L   M++   +P+V+T+ +LI   + E K+F  A    D +      PD V +N +I
Sbjct: 345 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFE-AEKLCDEMLHRCIFPDTVTYNSMI 403

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVE 389
               K   +DDA  ++D    L   PD  TF +++   C + R      L + +    + 
Sbjct: 404 YGFCKHNRFDDAKHMFD----LMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 459

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN-------YSFVG---------- 432
           A+   YN L+  FC+    N A  L+  M+  G  PD        Y F            
Sbjct: 460 ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALEL 519

Query: 433 ------------------LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
                             ++ G+C   K+DEA +++  + ++    +   +  ++     
Sbjct: 520 FEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCG 579

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
                 A  LF +     +  D  +Y   IRG L+ G  +++  L S+M+      +A+T
Sbjct: 580 KSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 639

Query: 535 YRVMLLSFCKERNIKMVKRLLQD 557
                        IKMV  L+ D
Sbjct: 640 -------------IKMVADLITD 649



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 93/378 (24%), Positives = 155/378 (41%), Gaps = 35/378 (9%)

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           L  G    + LD A   ++ MV++      V    +I  F+      +A S    +E   
Sbjct: 77  LKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRR 136

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
              ++   N+LI C         +L  +  L +L   PD  TF +LL  +CL  R S   
Sbjct: 137 IPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRIS--- 193

Query: 381 KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
                   EA      AL  Y  + G       L++ M++ G TP   +F  L+ GLC  
Sbjct: 194 --------EA-----LALFGYMVETG------SLFDQMVEIGLTPVVITFNTLINGLCLE 234

Query: 441 RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSY 500
            ++ EA  +   +V     ++   +  IV+ + + G    A+ L  +        DVV Y
Sbjct: 235 GRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIY 294

Query: 501 TVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
           +  I  L + G   +A  L+S+M    + PN +TY  M+  FC        +RLL+D+I+
Sbjct: 295 SAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE 354

Query: 561 ARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTPVSL 620
             I  D          +  F++  SA  +  ++     + DEM  +   +  +T+T  S+
Sbjct: 355 REINPD----------VLTFNALISASVKEGKLFEAEKLCDEMLHR--CIFPDTVTYNSM 402

Query: 621 FDGFVPCERRAGNANHLL 638
             GF     R  +A H+ 
Sbjct: 403 IYGFCK-HNRFDDAKHMF 419


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 112/467 (23%), Positives = 207/467 (44%), Gaps = 7/467 (1%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
           F+ M R    P T   + ++  + ++G     I +  + Q     P+  +F I +     
Sbjct: 43  FNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFH 102

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            +  +    ++  +++ G+ PN+  F  ++N FC  G I +A      ++  G       
Sbjct: 103 QSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFT 162

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  LI+G  +  ++  A +L ++M ++   PN+V Y++LI G  +    S A      + 
Sbjct: 163 YGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIG 222

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G   D V +N LID    +G + +   +   ++   + PD YTF  L+  +C  GR  
Sbjct: 223 ERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRIL 282

Query: 378 LLPKLVCGLEV---EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
               ++  +     + D+V YNAL+  +C     ++A +L+N M+ +G  PD  ++  L+
Sbjct: 283 EAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLI 342

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            G C  + +DEA+ +++ +   N       + +++D L  +GR     +L         P
Sbjct: 343 DGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQP 402

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
            DVV+Y + I  L + GR  EA  +   M    V PN  TY  M+  +C   N+ + K +
Sbjct: 403 PDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDI 462

Query: 555 LQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
              ++ + +E D      L     K      A+    EM +  LIPD
Sbjct: 463 FNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPD 509



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 110/458 (24%), Positives = 209/458 (45%), Gaps = 43/458 (9%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGR----VDLGIKVLKETQLPNFLSFNIALCNLCKLN 199
           ++G  G   +    N ++D    +GR      L  K+++E   P+  +FNI +  LCK  
Sbjct: 220 QIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEG 279

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
            +   + V+ MM ++G  P++  +  L+  +C    + EA +L   M+  G    V  + 
Sbjct: 280 RILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYN 339

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
           VLIDG+ + + +D A  L++++      P + +Y SLI G   +   S     LD +   
Sbjct: 340 VLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGS 399

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
              PD+V +N+LID L K G   +AL V   +++  + P+  T+ +++   CL    ++ 
Sbjct: 400 AQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVA 459

Query: 380 PKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
             +   +    +E D++ YN L++ +CK    ++A+ L+  M  K   PD  S+  L+ G
Sbjct: 460 KDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDG 519

Query: 437 LCGARKI-----------------------------------DEAINVYQGIVMNNPAVN 461
           LC   +I                                   D+AI++++ IV      +
Sbjct: 520 LCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV-EGIWPD 578

Query: 462 AHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYS 521
            + + AIVD L +  +   A    +  ++     +V +YT+ I  L + G   EA +L S
Sbjct: 579 FYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLS 638

Query: 522 QMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           +M+    PP+A T+ +++    +       ++L +++I
Sbjct: 639 KMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMI 676



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 119/485 (24%), Positives = 219/485 (45%), Gaps = 29/485 (5%)

Query: 136 GMVLEAFD---EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSF 188
           GM+ +A D    +   G+  + F    +++ L K G++   + +L+E +     PN + +
Sbjct: 139 GMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMY 198

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           +  +  LCK   VS+   +   +  +G   +   +  L++  C +GR  E  QLL  M+ 
Sbjct: 199 SALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVR 258

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
                    + +LID   +  R+  A  +   M + G  P++VTY +L++G+   +    
Sbjct: 259 ENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHE 318

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A    + +   G  PD++ +NVLID   K    D+A+ ++  L    LVP   ++ SL+ 
Sbjct: 319 ARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLID 378

Query: 369 TVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
            +C SGR S + KL+  +   A   D+V YN L+   CK G   +A+ +   M+ KG  P
Sbjct: 379 GLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKP 438

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMN---------NPAVNAHVHTAIVDRLIEAG 476
           +  ++  ++ G C    ++ A +++  +V +         N  +N +  T +VD      
Sbjct: 439 NIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVD------ 492

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
              +AI LF+    +    D+ SY   I GL   GR      L  +M      P+  TY 
Sbjct: 493 ---EAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYN 549

Query: 537 VMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNL 596
           ++L +FCK +       L + +++  I  D++T+  +   + K      A + L  +   
Sbjct: 550 ILLDAFCKTQPFDKAISLFRQIVEG-IWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMH 608

Query: 597 GLIPD 601
           G  P+
Sbjct: 609 GCSPN 613


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 127/495 (25%), Positives = 221/495 (44%), Gaps = 46/495 (9%)

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNI 190
           Y  V+    +M   G  P+    +I+++    +G++        K+LK    PN +  N 
Sbjct: 26  YPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNT 85

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +  LC   +V         +V +GF  +   + ILLN  CK+G    A +LL  +    
Sbjct: 86  LMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRS 145

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
           T   V  ++ +IDG  + + +D A  L+ +M   G  P+V+TYT+LI GF  A     AF
Sbjct: 146 TRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAF 205

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
             L+ +  +   P++  +N LID L K G   ++ ++   + +  + PD   +  L+   
Sbjct: 206 GLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGY 265

Query: 371 CLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           CL G      ++   +    V  D+  YN +++  CK    ++A+ L   ML K   PD 
Sbjct: 266 CLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDT 325

Query: 428 YSFVGL-----------------------------------LRGLCGARKIDEAINVYQG 452
            ++  L                                   L GLC  + +D+AI ++  
Sbjct: 326 VTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMK 385

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           +       N + +TA++D L + GR  K   LF+  +V+ Y +DV +YTV I GL + G 
Sbjct: 386 MKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGM 445

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE--LDYHT- 569
            +EA  + S+M+     PNA T+ +++ S  ++      ++LL ++I   +    ++H+ 
Sbjct: 446 FDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLPFRNFHSE 505

Query: 570 -SIRLTKFIFKFHSS 583
            S    K I  FHS 
Sbjct: 506 RSSVTNKVIVNFHSE 520



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 109/459 (23%), Positives = 207/459 (45%), Gaps = 38/459 (8%)

Query: 181 QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAY 240
            +P  + F   L +L K+     V  +   M  KG  P++    IL+NCFC +G++A ++
Sbjct: 6   HIPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSF 65

Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
            +LG ++ LG   +      L+ G      +  + +  +K+V  G   + V+Y  L+ G 
Sbjct: 66  SVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGL 125

Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
            +      A   L  +E     PD+V ++ +ID L K    D+A D+Y  +    + PD 
Sbjct: 126 CKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDV 185

Query: 361 YTFCSLLSTVCLSGR----FSLLPKLV--------------------------------- 383
            T+ +L+   CL+G+    F LL +++                                 
Sbjct: 186 ITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAV 245

Query: 384 -CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
                V+ D+V+Y+ L+  +C  G   +A +++  M+  G  PD YS+  ++ GLC  ++
Sbjct: 246 MTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKR 305

Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTV 502
           +DEA+N+ + ++  N   +   +++++D L + GR    + L +       P ++V+Y  
Sbjct: 306 VDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNS 365

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
            + GL +    ++A  L+ +MK   + PN YTY  ++   CK   +K  + L Q ++   
Sbjct: 366 LLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKG 425

Query: 563 IELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
             +D  T   +   + K      A+    +M + G IP+
Sbjct: 426 YCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPN 464



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 58/238 (24%), Positives = 104/238 (43%), Gaps = 4/238 (1%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           L G  +  + I   + + G      ++ + +    +G+     +    EM      P+T 
Sbjct: 267 LVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTV 326

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKET----QLPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
             + ++D L K+GR+   + + KE     Q  N +++N  L  LCK  ++     +   M
Sbjct: 327 TYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKM 386

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
             +G  PN   +  L++  CK GR+ +   L   ++  G  + V  +TV+I G  +    
Sbjct: 387 KERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMF 446

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHN 329
           D A  +  KM  NGC PN VT+  +I+  +E      A   L  + ++G  P   FH+
Sbjct: 447 DEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLPFRNFHS 504



 Score = 40.8 bits (94), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 37/179 (20%), Positives = 70/179 (39%), Gaps = 5/179 (2%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
            ++   D  ++  +I  + +L GR  T+  +  E+   G      T+   L    + +  
Sbjct: 318 HKNMIPDTVTYSSLIDGLCKL-GRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNL 376

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFL----SFNIA 191
              +  F +M   G  PN +    ++D L K GR+  G  + +   +  +     ++ + 
Sbjct: 377 DKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVM 436

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
           +  LCK         +   M   G  PN   FEI++    +     +A +LL  MI  G
Sbjct: 437 ISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKG 495


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 134/605 (22%), Positives = 258/605 (42%), Gaps = 41/605 (6%)

Query: 14  QRTQILKTIISFKSIHQISSPKVCATTHQDFPIILAPHIVHSTLLNCPSDLIALSFFIWC 73
            R +I++++IS  S         C   +  F +++  + V +  LN  +D   +      
Sbjct: 96  SRVEIVESLISMSS--------TCGVDNLVFDLLIRSY-VQARKLNEGTDTFKI------ 140

Query: 74  AKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGE 133
            +++ +   + + + ++  + ++ G  +    +  E+AR G  +   T  + +    +  
Sbjct: 141 LRRKGFLVSINACNSLLGGLVKM-GWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDH 199

Query: 134 MYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFN 189
               V     +M + G   +    N +++   + G +    +V+         P   ++N
Sbjct: 200 KIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYN 259

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
             +  LCK       K V   M+  G  P+   +  LL   C+     EA  +   M+  
Sbjct: 260 AVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHR 319

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           G S  + +++ LI    R   LD A   +  M  +G  P+ V YT LI G+    M S A
Sbjct: 320 GVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEA 379

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
               D +  +G A D+V +N +++ L K     DA  ++D ++E  +VPD  TF +L+  
Sbjct: 380 LEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHG 439

Query: 370 VCLSGRFSL---LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
            C  G       L  ++    ++ D+V YN L+  FCK     +A +L+N M+ +   P+
Sbjct: 440 HCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPN 499

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
           + S+  L+ G C    + EA  ++  ++             ++     +G   KA +   
Sbjct: 500 HISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLG 559

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
           + I E    D ++Y   I G ++G   ++A+ L ++M+   + P+  TY V+L  FC++ 
Sbjct: 560 KMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQG 619

Query: 547 NIKMVKRLLQDVIDARIELDYHTSIRLT---------KFIFKFHSSSSAVNQLVEMCNLG 597
            ++  + +L+ +I+  I+ D  T   L          K  F+FH          EM   G
Sbjct: 620 RMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHD---------EMLQRG 670

Query: 598 LIPDE 602
            +PD+
Sbjct: 671 FVPDD 675


>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
          Length = 604

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 134/546 (24%), Positives = 238/546 (43%), Gaps = 44/546 (8%)

Query: 65  IALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVG-CVIKAQTFL 123
           + + FF W AK+R+Y HD  ++  +I  +  +  ++  +  ++ E+ R   CV+      
Sbjct: 72  VKMQFFRWAAKRRNYEHDTSTYMALIHCL-EVVEQYGEMWKMIQEMVRNPICVVTPTELS 130

Query: 124 LFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP 183
             +R+    +M    +  F ++      P   A N ++ +L   G+ +      K  QL 
Sbjct: 131 DVVRMLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYE------KVHQLY 184

Query: 184 NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
           N +S                             +P+   +  L++ FCK+GR   A QLL
Sbjct: 185 NEMS------------------------TEGHCFPDTVTYSALISAFCKLGRRDSAIQLL 220

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
             M  +G   +   +T+LI  F +      A  L+E+M    C P+V TYT LI+G  +A
Sbjct: 221 NEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKA 280

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
                A+ F   ++ EG  PD VF N +I+ L K G  DDA+ ++  +  L+ +P   T+
Sbjct: 281 GRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTY 340

Query: 364 CSLLSTVCLS-GRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
            +++  +  S  R S +P     ++   +      Y+ L+  FCK     +A+ L   M 
Sbjct: 341 NTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMD 400

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
           +KGF P   ++  L+  L  A++ D A  ++Q +  N  + +A V+  ++  L +AGR  
Sbjct: 401 EKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLD 460

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
            AI +F          DV +Y   + GL   G  +EA     +M+     P+  +Y ++L
Sbjct: 461 DAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIIL 520

Query: 540 LSFCK----ERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCN 595
               K     R ++M+  + Q  +   + + Y+T +        F  +S  +    EM  
Sbjct: 521 NGLAKTGGPHRAMEMLSNMKQSTVRPDV-VSYNTVLGALSHAGMFEEASKLMK---EMNT 576

Query: 596 LGLIPD 601
           LG   D
Sbjct: 577 LGFEYD 582



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 107/475 (22%), Positives = 188/475 (39%), Gaps = 53/475 (11%)

Query: 83  VQSFDHMISVVTRLTGRFETVRGIVGELARVG-CVIKAQTFLLFLRIYWRGEMYGMVLEA 141
            Q+++ MI ++    G++E V  +  E++  G C     T+   +  + +       ++ 
Sbjct: 161 AQAYNSMIIMLMH-EGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQL 219

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
            +EM   G  P T    +++ + FK       + + +E +     P+  ++   +  L K
Sbjct: 220 LNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGK 279

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              +         M R+G  P+      ++N   K GR+ +A +L   M TL    SV  
Sbjct: 280 AGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVT 339

Query: 258 WTVLIDG-FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
           +  +I   F    R       +E+M ++G SP+  TY+ LI GF +      A   L+ +
Sbjct: 340 YNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEM 399

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR- 375
           + +G  P    +  LID L K   YD A +++  L E      +  +  ++  +  +GR 
Sbjct: 400 DEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRL 459

Query: 376 ------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
                 F  + KL C      D+  YNAL+S   + G  ++A+     M + G  PD   
Sbjct: 460 DDAINMFDEMNKLGCA----PDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPD--- 512

Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
                            IN Y  I++N               L + G  H+A+++     
Sbjct: 513 -----------------INSY-NIILNG--------------LAKTGGPHRAMEMLSNMK 540

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
                 DVVSY   +  L   G  EEA  L  +M  +    +  TY  +L +  K
Sbjct: 541 QSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGK 595



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/314 (20%), Positives = 140/314 (44%), Gaps = 11/314 (3%)

Query: 65  IALSFFIWCAKQRDYFH-DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFL 123
           I  ++  +C  QR+    D    ++MI+ + +  GR +    +  E+  + C+    T+ 
Sbjct: 283 IDEAYHFFCEMQREGCRPDTVFMNNMINFLGK-AGRLDDAMKLFQEMETLRCIPSVVTYN 341

Query: 124 LFLRIYWRGEMYGMVLEA-FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL 182
             ++  +  +     + + F+ M   G +P++F  +I++D   K  R++  + +L+E   
Sbjct: 342 TIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDE 401

Query: 183 PNFLSFNIALCNLCKLNDVSNVK------DVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
             F     A C+L  ++ +   K      ++   +       + R++ +++    K GR+
Sbjct: 402 KGFPPCPAAYCSL--IDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRL 459

Query: 237 AEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSL 296
            +A  +   M  LG +  V A+  L+ G  R   LD A     +M ++GC P++ +Y  +
Sbjct: 460 DDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNII 519

Query: 297 IKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
           + G  +      A   L  ++     PD+V +N ++  LS  G +++A  +   +  L  
Sbjct: 520 LNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGF 579

Query: 357 VPDSYTFCSLLSTV 370
             D  T+ S+L  +
Sbjct: 580 EYDLITYSSILEAI 593


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 123/519 (23%), Positives = 233/519 (44%), Gaps = 65/519 (12%)

Query: 57  LLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCV 116
           +L C +   AL  F   +++ D   + Q +  +I V+T     +   R ++ +L  + C+
Sbjct: 44  ILTCRTANQALELFHSVSRRADLAKNPQLYSAIIHVLTG-AKLYAKARCLMRDL--IQCL 100

Query: 117 IKAQTFLLFLRIY----------WRGEMYGMVLEAFDEMG----------RFGFTPNTFA 156
            K++   +   ++          +   ++G+++ AF EMG          +    P   A
Sbjct: 101 QKSRRSRICCSVFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQA 160

Query: 157 RNIVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N+V+D L K GR D   KV    +     PN +++   +   C+  D      +   M+
Sbjct: 161 CNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMI 220

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
            K  +P V ++ IL+   C   RI+EA  +   M   G   ++  +  ++DG+ ++  + 
Sbjct: 221 EKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVK 280

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A  L+ +M+ +G  PNVVT+  LI G  +      A  FL  + S G  P++  +N LI
Sbjct: 281 KALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLI 340

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA-- 390
           D   K G+  +AL ++  + + +++PD +T+  L+  +C   R      L+  ++ +   
Sbjct: 341 DGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFL 400

Query: 391 -DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            + V YN L+  +CK G   +A+++ + M +KG  P+  +F  L+ G C           
Sbjct: 401 PNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYC----------- 449

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
                                   +AG+   A+ L+   +++    DVV+YT  I G  +
Sbjct: 450 ------------------------KAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFK 485

Query: 510 GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
            G T+EA+ L+ +M+   + PN +T   ++   CK+  I
Sbjct: 486 DGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRI 524



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 123/507 (24%), Positives = 216/507 (42%), Gaps = 33/507 (6%)

Query: 71  IWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYW 130
           +W   + D    +Q+ + ++  + +  GRF+T+  + G++   G      T+   +    
Sbjct: 146 LWVYYKMDVLPAMQACNMVLDGLVK-KGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCC 204

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFL 186
           R   +      FDEM      P      I++  L    R+     + +  +    LPN  
Sbjct: 205 RQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLY 264

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           ++N  +   CK+  V    ++   M+  G  PNV  F IL++  CK   +  A + L  M
Sbjct: 265 TYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDM 324

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
            + G   ++  +  LIDG+ +   L  A  L  ++ ++   P+V TY+ LIKG       
Sbjct: 325 ASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRM 384

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
             A   L  ++ +G  P+ V +N LID   K G+ + A++V   + E  + P+  TF +L
Sbjct: 385 EEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTL 444

Query: 367 LSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           +   C +G+      L   + ++    D+V Y AL+    K G   +A +L+  M + G 
Sbjct: 445 IDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGL 504

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVY---QGIVMNNPAVNA---------HV-HTAIVD 470
            P+ ++   L+ GLC   +I +AI ++    G        N          HV +TA++ 
Sbjct: 505 HPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQ 564

Query: 471 RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
            L   GR  KA + F          DV +  V I+G        +  +L + +  + + P
Sbjct: 565 GLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIP 624

Query: 531 NAYTYRVM------------LLSFCKE 545
           N+  YRV+             LSFC E
Sbjct: 625 NSSVYRVLAKGYEESGYLKSALSFCGE 651



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 177/361 (49%), Gaps = 3/361 (0%)

Query: 204 VKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLID 263
           V++ + +  +    P ++   ++L+   K GR    +++ G M+  G S +V  +  LID
Sbjct: 142 VEEALWVYYKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLID 201

Query: 264 GFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP 323
           G  R      A  L+++M++    P VV YT LI+G       S A S    + + G  P
Sbjct: 202 GCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLP 261

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV 383
           +L  +N ++D   K+     AL++Y  +L   L+P+  TF  L+  +C +       K +
Sbjct: 262 NLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFL 321

Query: 384 CGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
             +    V  ++ VYN L+  +CKAG  ++A+ L++ +      PD +++  L++GLCG 
Sbjct: 322 IDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGV 381

Query: 441 RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSY 500
            +++EA  + Q +       NA  +  ++D   + G   KAI++  +   +    +++++
Sbjct: 382 DRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITF 441

Query: 501 TVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
           +  I G  + G+ E A  LY++M    + P+   Y  ++    K+ N K   RL +++ +
Sbjct: 442 STLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQE 501

Query: 561 A 561
           A
Sbjct: 502 A 502



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 101/405 (24%), Positives = 184/405 (45%), Gaps = 18/405 (4%)

Query: 207 VIGMMVRKGFYPNVR-MFEILLNCFCKMGRIAEAYQLLGLMITLGTS-LSVNAWTVLIDG 264
           +I ++     Y   R +   L+ C  K  R      +  ++  L +S  + N + VLI  
Sbjct: 76  IIHVLTGAKLYAKARCLMRDLIQCLQKSRRSRICCSVFNVLSRLESSKFTPNVFGVLIIA 135

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
           F  +  ++ A +++ KM      P +     ++ G ++   F   +     + + G +P+
Sbjct: 136 FSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPN 192

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVC 384
           +V +  LID   + G +  A  ++D ++E K+ P    +  L+  +C   R S    +  
Sbjct: 193 VVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFR 252

Query: 385 GLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
            +       +L  YN ++  +CK     +A++LY  ML  G  P+  +F  L+ GLC   
Sbjct: 253 TMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLC--- 309

Query: 442 KIDEAINVYQGIV-MNNPAV--NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL--D 496
           K DE ++  + ++ M +  V  N  V+  ++D   +AG   +A+ L     +EK+ +  D
Sbjct: 310 KTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSE--IEKHEILPD 367

Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
           V +Y++ I+GL    R EEA  L  +MK     PNA TY  ++  +CKE N++    +  
Sbjct: 368 VFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCS 427

Query: 557 DVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            + +  IE +  T   L     K     +A+    EM   GL+PD
Sbjct: 428 QMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPD 472


>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 447

 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 114/408 (27%), Positives = 201/408 (49%), Gaps = 13/408 (3%)

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
            N+V D + +  R+ L    ++ T  P  + F   L  L K+        +   M  KG 
Sbjct: 43  ENVVDDTVSQFNRLLL----VRHT--PPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGI 96

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
            PN+    IL+NCFC +G++A ++ +LG ++ LG          L+ G      +  + +
Sbjct: 97  EPNLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLH 156

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
             +K+V  G   N V+Y +L+ G  +      A   L M+E     PD+V ++ +ID L 
Sbjct: 157 FHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLC 216

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADL 392
           K    + A D +  +    + P+  T+ +L+   CL+G+    FSLL +++    +  ++
Sbjct: 217 KDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILK-NINPNV 275

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
             YN L+   CK G   +A KL   M  KG   D  ++  +L GLC ++ +D+A  ++  
Sbjct: 276 YTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMK 335

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           +       N + +TA++D L + GR   A +LF+  +V+   +DV +Y V I GL + G 
Sbjct: 336 MKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGM 395

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLS-FCKERNIKMVKRLLQDVI 559
            ++A  + S+M+     PNA T+ +++ S F K+ N K  ++LL  +I
Sbjct: 396 FDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDK-AEKLLHGMI 442



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 82/338 (24%), Positives = 155/338 (45%), Gaps = 3/338 (0%)

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
           +++    A  L  +M   G  PN+VT   LI  F      + +FS L  +   G+ PD +
Sbjct: 77  KMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTI 136

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL 386
             N L+  L   G    +L  +D ++      +  ++ +LL+ +C  G      KL+  +
Sbjct: 137 TLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMI 196

Query: 387 E---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
           E      D+V+Y+ ++   CK    NQA   ++ M  +G  P+  ++  L+ G C A ++
Sbjct: 197 EDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQL 256

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
             A ++   +++ N   N + +  ++D L + G+  +A +L      +  P DVV+Y   
Sbjct: 257 MGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSV 316

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           + GL +    ++A  L+ +MK   + PN YTY  ++   CK   +K  ++L Q ++    
Sbjct: 317 LDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGC 376

Query: 564 ELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            +D  T   +   + K      A+    +M + G IP+
Sbjct: 377 CIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPN 414



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 160/364 (43%), Gaps = 7/364 (1%)

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNI 190
           Y   +    +M   G  PN    NI+++    +G++        K+LK    P+ ++ N 
Sbjct: 81  YPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNT 140

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +  LC   +V         +V +GF  N   +  LLN  CK+G    A +LL ++    
Sbjct: 141 LMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRS 200

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
           T   V  ++ +IDG  + + ++ A   + +M   G  PNV+TY++LI GF  A     AF
Sbjct: 201 TRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAF 260

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
           S L+ +  +   P++  +N+LID L K G   +A  +   +       D  T+ S+L  +
Sbjct: 261 SLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGL 320

Query: 371 CLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           C S        L   ++   ++ +   Y AL+   CK G    A KL+  +L KG   D 
Sbjct: 321 CKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDV 380

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
            ++  ++ GLC     D+A+ +   +  N    NA     I+  L E     KA +L   
Sbjct: 381 RTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKLLHG 440

Query: 488 AIVE 491
            I +
Sbjct: 441 MIAK 444


>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 906

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 103/404 (25%), Positives = 197/404 (48%), Gaps = 8/404 (1%)

Query: 147 RFGFTPNTFARNIVMDVLFKIGRVDLGIKV---LKETQLPNFLSFNIALCNLCKLNDVSN 203
           R G  P+  A N ++  L + G+V+  +++   +++   PN  ++NI +  LCK  ++  
Sbjct: 371 RKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAAPNLTTYNILIDMLCKAGELEA 430

Query: 204 VKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL-LGLMITLGTSLSVNAWTVLI 262
              V   M   G +PN+    I+++  CK  ++ EA  + LGL   + +  S   +  LI
Sbjct: 431 ALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDS-RTFCSLI 489

Query: 263 DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
           DG  R  R+D A  L+EKM+ +   PNVV YTSLI+ F +             +   G +
Sbjct: 490 DGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCS 549

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL 382
           PDL+  N  +DC+ K G  +    +++ +    LVPD  ++  L+  +  +G      KL
Sbjct: 550 PDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKL 609

Query: 383 VCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
              ++ +    D++ YN ++  FCK+G  ++A +L   M  KG  P   ++  ++ GL  
Sbjct: 610 FYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAK 669

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
             ++DEA  +++        +N  ++++++D   + GR  +A  +    + +    +  +
Sbjct: 670 IDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYT 729

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           +   +  L++    +EA + +  MK++   PNA TY +M+   C
Sbjct: 730 WNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLC 773



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 117/501 (23%), Positives = 220/501 (43%), Gaps = 10/501 (1%)

Query: 109 ELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIG 168
           ++  +G       F   +R++ R       L   DEM    FT +    N+ +D   K+G
Sbjct: 228 QMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVG 287

Query: 169 RVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFE 224
           +VD+  K   E +    +P+ +++   +  LCK   +    ++   +      P V  + 
Sbjct: 288 KVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYN 347

Query: 225 ILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN 284
            ++  +   G+  EAY LL      G   SV A+  ++    R  +++ A  + ++M Q+
Sbjct: 348 TMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQD 407

Query: 285 GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
             +PN+ TY  LI    +A     A    D ++  G  P+++  N++ID L K    D+A
Sbjct: 408 A-APNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEA 466

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNALLS 400
             ++ GL      PDS TFCSL+  +   GR    +SL  K++   ++  ++VVY +L+ 
Sbjct: 467 CSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQI-PNVVVYTSLIQ 525

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
            F K G      K+Y  M+ +G +PD       +  +  A ++++   +++ I       
Sbjct: 526 NFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVP 585

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
           +   ++ ++  L++AG   +  +LF     +   LDV++Y   I G  + G+ ++AY L 
Sbjct: 586 DVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLL 645

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKF 580
            +MK   + P   TY  ++    K   +     L ++     ++L+      L     K 
Sbjct: 646 EEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKV 705

Query: 581 HSSSSAVNQLVEMCNLGLIPD 601
                A   L E+   GL P+
Sbjct: 706 GRIDEAYLILEELMQKGLTPN 726



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 105/496 (21%), Positives = 213/496 (42%), Gaps = 46/496 (9%)

Query: 44  FPIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETV 103
           F  +  P ++   +       +A  +F W  ++    H  + ++  + V+ R T   + +
Sbjct: 94  FDEMSQPEVIVGVMKRLKDVNVAFQYFRWVERKTQQAHCPEVYNAFLMVMAR-TRNLDYL 152

Query: 104 RGIVGELARVG----CVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNI 159
             I+ E++  G      +  +    F++ +   E +G++    + M +F F P   A   
Sbjct: 153 EQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVI----EMMRKFKFRPAFSAYTT 208

Query: 160 VMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG 215
           ++  L    R D  + +  + Q      N   F   +    +   +     ++  M    
Sbjct: 209 LIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNS 268

Query: 216 FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAG 275
           F  ++ ++ + ++CF K+G++  A++    M   G       +T LI    + RRLD A 
Sbjct: 269 FTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAV 328

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
            L+E++  N   P V  Y ++I G+  A  F  A+S L+  + +G  P ++ +N ++ CL
Sbjct: 329 ELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCL 388

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVY 395
            + G  ++AL ++D + +                                 +   +L  Y
Sbjct: 389 GRKGKVEEALRIHDEMRQ---------------------------------DAAPNLTTY 415

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
           N L+   CKAG    A+K+ +TM + G  P+  +   ++  LC A+K+DEA +++ G+  
Sbjct: 416 NILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDH 475

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
              + ++    +++D L   GR   A  L+ + +      +VV YT  I+   + GR E+
Sbjct: 476 KVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKED 535

Query: 516 AYILYSQMKHIAVPPN 531
            + +Y +M H    P+
Sbjct: 536 GHKIYKEMVHRGCSPD 551



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 173/356 (48%), Gaps = 13/356 (3%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           + EM   G +P+    N  MD +FK G V+ G  + +E +    +P+  S++I +  L K
Sbjct: 540 YKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVK 599

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
                    +   M  +G + +V  +  +++ FCK G++ +AYQLL  M T G   +V  
Sbjct: 600 AGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVT 659

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  ++DG  ++ RLD A  L+E+    G   NVV Y+SLI GF +      A+  L+ L 
Sbjct: 660 YGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELM 719

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
            +G  P+    N L+D L K    D+A   +  +  LK  P++ T+  +++ +C+  +F+
Sbjct: 720 QKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFN 779

Query: 378 ---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
              +  + +    ++ + + Y  +++   KAG   +A  L++     G  PD+  +  ++
Sbjct: 780 KAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMI 839

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
            GL  A K  +A  V++   +    VN+     ++D L      HKA  L + AIV
Sbjct: 840 EGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDAL------HKADCLEQAAIV 889



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 114/521 (21%), Positives = 216/521 (41%), Gaps = 19/521 (3%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLS-FNIALCNLC 196
            L  FDEM +         R   ++V F+  R      V ++TQ  +    +N  L  + 
Sbjct: 90  ALNVFDEMSQPEVIVGVMKRLKDVNVAFQYFRW-----VERKTQQAHCPEVYNAFLMVMA 144

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
           +  ++  ++ ++  M   GF  +  +   L+  F K  ++ EA+ ++ +M       + +
Sbjct: 145 RTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMMRKFKFRPAFS 204

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
           A+T LI       R D    L+ +M + G   NV  +T+L++ F        A S LD +
Sbjct: 205 AYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEM 264

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
           +S     DLV +NV IDC  K+G  D A   +  +    LVPD  T+ +L+  +C + R 
Sbjct: 265 KSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRL 324

Query: 377 SLLPKLVCGLEVEAD---LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
               +L   L++      +  YN ++  +  AG  ++A  L      KG  P   ++  +
Sbjct: 325 DEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCI 384

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           L  L    K++EA+ ++  +   + A N   +  ++D L +AG    A+++         
Sbjct: 385 LTCLGRKGKVEEALRIHDEM-RQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGL 443

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
             ++++  + I  L +  + +EA  ++  + H    P++ T+  ++    +   +     
Sbjct: 444 FPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYS 503

Query: 554 LLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM----WRKLGL 609
           L + ++D+    +      L +  FK            EM + G  PD M    +     
Sbjct: 504 LYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVF 563

Query: 610 LSDETMTPVSLFD-----GFVPCERRAGNANHLLLNGGVGR 645
            + E     +LF+     G VP  R      H L+  G  R
Sbjct: 564 KAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSR 604


>gi|115474201|ref|NP_001060699.1| Os07g0688100 [Oryza sativa Japonica Group]
 gi|33146488|dbj|BAC79597.1| membrane-associated salt-inducible protein-like [Oryza sativa
           Japonica Group]
 gi|50509161|dbj|BAD30301.1| membrane-associated salt-inducible protein-like [Oryza sativa
           Japonica Group]
 gi|113612235|dbj|BAF22613.1| Os07g0688100 [Oryza sativa Japonica Group]
 gi|215678726|dbj|BAG95163.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222637719|gb|EEE67851.1| hypothetical protein OsJ_25651 [Oryza sativa Japonica Group]
          Length = 665

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 131/564 (23%), Positives = 240/564 (42%), Gaps = 45/564 (7%)

Query: 48  LAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIV 107
           L P +V+  L       +A+ F+ W   +  ++H+  +  ++IS++  +   F  +   +
Sbjct: 90  LDPFVVNKVLRGLLDSGMAVRFYWWAESRPGFYHNNFAIAYIISLLF-VDDNFALLSEFL 148

Query: 108 GELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEM-----GRFGFTPNTFARNIVMD 162
           G +   G       + + L  Y R   +  V+E FDEM       FG   N F   ++ +
Sbjct: 149 GRVRSQGVAFHRSLYRVLLAGYARAGKFDSVIETFDEMVTSGCREFGVDYNRFIGVMIKN 208

Query: 163 VLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
             F +      + + K   L  F +++  +  LC+ N +  V++++  M + G +P+   
Sbjct: 209 CCFDLVEKYYNMALAKGFCLTPF-TYSRWITALCQSNRIELVEELLTDMDKFGCFPDFWA 267

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
             I ++  C   R+ +A Q++                                   EKM 
Sbjct: 268 CNIYVHYLCGHNRLYDALQMV-----------------------------------EKMT 292

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
             G  P+VVTYT+++    + + FS A    + +   G  PD+V    LI  L K    D
Sbjct: 293 MKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRGLKPDVVACGALIFGLCKNQKVD 352

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALL 399
           +A ++   +L L +  +   + +L+S    +G      K V  ++    E D+V YN LL
Sbjct: 353 EAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYNILL 412

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
           +++C  G  ++A  L   M   G  PD YS+  LL+GLC A ++D+A       +     
Sbjct: 413 NHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCKAHQLDKAFAFVSDHMEVGGF 472

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            +      ++D    A + + A+ LF+    +    D V+Y + I GL   G +  A  L
Sbjct: 473 CDIVSCNILIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGILINGLFGIGYSNLAEEL 532

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK 579
           + QM +  + PN   Y +ML + CK  + K  +++   +    +  D  T   L  ++ K
Sbjct: 533 FDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTVTFNTLIYWLGK 592

Query: 580 FHSSSSAVNQLVEMCNLGLIPDEM 603
              +  A++   EM   G+ PD +
Sbjct: 593 SSRAVEALDLFKEMRTKGVEPDNL 616



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/441 (24%), Positives = 192/441 (43%), Gaps = 36/441 (8%)

Query: 137 MVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIAL 192
           +V E   +M +FG  P+ +A NI +  L    R+   ++++++  +    P+ +++   +
Sbjct: 248 LVEELLTDMDKFGCFPDFWACNIYVHYLCGHNRLYDALQMVEKMTMKGTGPDVVTYTTVV 307

Query: 193 CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
             LC     S    +   MVR+G  P+V     L+   CK  ++ EA++L   M+TL   
Sbjct: 308 SCLCDHRRFSEAVGLWEEMVRRGLKPDVVACGALIFGLCKNQKVDEAFELASRMLTLDIQ 367

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
           L+V+ +  LI GF R   ++ A      M +NGC P+VVTY  L+  +    M   A + 
Sbjct: 368 LNVSIYNALISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENL 427

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
           +  +E  G  PD   +N+L+  L K    D A       +E+        FC        
Sbjct: 428 IRKMEMSGVNPDRYSYNILLKGLCKAHQLDKAFAFVSDHMEVG------GFC-------- 473

Query: 373 SGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
                             D+V  N L+  FC+A   N A+ L+  M  KG   D  ++  
Sbjct: 474 ------------------DIVSCNILIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGI 515

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           L+ GL G    + A  ++  ++      N +V+  ++  L + G    A ++F +   ++
Sbjct: 516 LINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKE 575

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVK 552
              D V++   I  L +  R  EA  L+ +M+   V P+  T+R ++     E    +  
Sbjct: 576 VSPDTVTFNTLIYWLGKSSRAVEALDLFKEMRTKGVEPDNLTFRYIISGLLDEGKATLAY 635

Query: 553 RLLQDVIDARIELDYHTSIRL 573
            + + +++  I LD   S RL
Sbjct: 636 EIWEYMMENGIILDRDVSERL 656



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/282 (20%), Positives = 117/282 (41%), Gaps = 5/282 (1%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           +V  ++ +IS   R  G  E     V  + R GC     T+ + L  Y    M       
Sbjct: 369 NVSIYNALISGFWR-AGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENL 427

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
             +M   G  P+ ++ NI++  L K  ++D     + +        + +S NI +   C+
Sbjct: 428 IRKMEMSGVNPDRYSYNILLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCR 487

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              V++  ++   M  KG   +   + IL+N    +G    A +L   M+      +VN 
Sbjct: 488 AKKVNSALNLFKEMGYKGIQADAVTYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNV 547

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           + +++    ++     A  ++ +M Q   SP+ VT+ +LI    ++     A      + 
Sbjct: 548 YNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAVEALDLFKEMR 607

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
           ++G  PD +    +I  L   G    A ++++ ++E  ++ D
Sbjct: 608 TKGVEPDNLTFRYIISGLLDEGKATLAYEIWEYMMENGIILD 649


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/449 (22%), Positives = 210/449 (46%), Gaps = 42/449 (9%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALC 193
            ++ F +M +    P+    N ++  + K+ + +L I + ++ Q      +  +++I + 
Sbjct: 67  AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
             C+ + +S    V+  M++ G+ P++     LLN +C   RI++A  L+  M+ +G   
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF------------- 300
               +T LI G     +   A  L ++MVQ GC P++VTY +++ G              
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLL 246

Query: 301 --MEA--------------------KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
             MEA                    +   +A      +E++G  P++V +N LI+CL   
Sbjct: 247 NKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNY 306

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVY 395
           G + DA  +   +LE K+ P+  TF +L+      G+     KL   +    ++ D + Y
Sbjct: 307 GRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITY 366

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
           N L++ FC     ++A +++  M+ K   P+  ++  L+ G C  +++++ + +++ +  
Sbjct: 367 NLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQ 426

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
                N   +T I+    +AG C  A  +F++ +  + P D+++Y++ + GL   G+ + 
Sbjct: 427 RGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDT 486

Query: 516 AYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
           A +++  ++   +  N + Y  M+   CK
Sbjct: 487 ALVIFKYLQKSEMELNIFIYNTMIEGMCK 515



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/425 (24%), Positives = 199/425 (46%), Gaps = 38/425 (8%)

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
           RN + D++     VDL   ++K    P+ + FN  L  + K+N    V  +   M   G 
Sbjct: 55  RNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI 114

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA-- 274
             ++  + I +NCFC+  +++ A  +L  M+ LG    +   + L++G+   +R+  A  
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174

Query: 275 --------GY-------------------------LWEKMVQNGCSPNVVTYTSLIKGFM 301
                   GY                         L ++MVQ GC P++VTY +++ G  
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           +     +A + L+ +E+     ++V  N +ID L K    + A+D++  +    + P+  
Sbjct: 235 KRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVV 294

Query: 362 TFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           T+ SL++ +C  GR+S   +L+  +   ++  ++V +NAL+  F K G   +A KL+  M
Sbjct: 295 TYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEM 354

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
           + +   PD  ++  L+ G C   ++DEA  +++ +V  +   N   +  +++   +  R 
Sbjct: 355 IQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRV 414

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
              ++LFR         + V+YT  I+G  + G  + A +++ QM    VP +  TY ++
Sbjct: 415 EDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSIL 474

Query: 539 LLSFC 543
           L   C
Sbjct: 475 LHGLC 479



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 119/515 (23%), Positives = 231/515 (44%), Gaps = 23/515 (4%)

Query: 57  LLNCPSDLI----ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELAR 112
           L N  SD+I    A+  F    K R  F  +  F+ ++S V ++  +FE V  +  ++  
Sbjct: 54  LRNRLSDIIKVDDAVDLFGDMVKSRP-FPSIVEFNKLLSAVAKMN-KFELVISLGEQMQT 111

Query: 113 VGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDL 172
           +G      T+ +F+  + R     + L    +M + G+ P+    + +++      R+  
Sbjct: 112 LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171

Query: 173 GIKVLKET----QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLN 228
            + ++ +       P+  +F   +  L   N  S    ++  MV++G  P++  +  ++N
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231

Query: 229 CFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSP 288
             CK G I  A  LL  M       +V  +  +ID   + R +++A  L+ +M   G  P
Sbjct: 232 GLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRP 291

Query: 289 NVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVY 348
           NVVTY SLI        +S A   L  +  +   P++V  N LID   K G   +A  ++
Sbjct: 292 NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLH 351

Query: 349 DGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKA 405
           + +++  + PD+ T+  L++  C+  R      + K +   +   ++  YN L++ FCK 
Sbjct: 352 EEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKC 411

Query: 406 GFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVH 465
                 V+L+  M  +G   +  ++  +++G   A   D A  V++ +V N    +   +
Sbjct: 412 KRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTY 471

Query: 466 TAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKH 525
           + ++  L   G+   A+ +F+     +  L++  Y   I G+ + G+  EA+ L+  +  
Sbjct: 472 SILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL-- 529

Query: 526 IAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
            ++ P+  TY  M+   C        KRLLQ+  D
Sbjct: 530 -SIKPDVVTYNTMISGLCS-------KRLLQEADD 556



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/350 (23%), Positives = 165/350 (47%), Gaps = 7/350 (2%)

Query: 137 MVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK---ETQL-PNFLSFNIAL 192
           + ++ F EM   G  PN    N +++ L   GR     ++L    E ++ PN ++FN  +
Sbjct: 276 VAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALI 335

Query: 193 CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
               K   +   + +   M+++   P+   + +L+N FC   R+ EA Q+   M++    
Sbjct: 336 DAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCL 395

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
            ++  +  LI+GF + +R++    L+ +M Q G   N VTYT++I+GF +A     A   
Sbjct: 396 PNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMV 455

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
              + S     D++ +++L+  L   G  D AL ++  L + ++  + + + +++  +C 
Sbjct: 456 FKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCK 515

Query: 373 SGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
           +G+      L C L ++ D+V YN ++S  C      +A  L+  M + G  P++ ++  
Sbjct: 516 AGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNT 575

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT-AIVDRLIEAGRCHKA 481
           L+R     R  D A +      M +        T ++V  ++  GR  K+
Sbjct: 576 LIRA--NLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHDGRLDKS 623



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/379 (22%), Positives = 167/379 (44%), Gaps = 3/379 (0%)

Query: 224 EILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQ 283
           EIL N    + ++ +A  L G M+      S+  +  L+    ++ + ++   L E+M  
Sbjct: 52  EILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQT 111

Query: 284 NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
            G S ++ TY+  I  F      S+A + L  +   G+ PD+V  + L++         D
Sbjct: 112 LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171

Query: 344 ALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLS 400
           A+ + D ++E+   PD++TF +L+  + L  + S    LV  +     + DLV Y  +++
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
             CK G  + A+ L N M       +   F  ++  LC  R ++ A++++  +       
Sbjct: 232 GLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRP 291

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
           N   + ++++ L   GR   A +L    + +K   +VV++   I    + G+  EA  L+
Sbjct: 292 NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLH 351

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKF 580
            +M   ++ P+  TY +++  FC    +   K++ + ++      +  T   L     K 
Sbjct: 352 EEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKC 411

Query: 581 HSSSSAVNQLVEMCNLGLI 599
                 V    EM   GL+
Sbjct: 412 KRVEDGVELFREMSQRGLV 430



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/300 (24%), Positives = 135/300 (45%), Gaps = 6/300 (2%)

Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
           F DM++S    P +V  N L+  ++KM  ++  + + + +  L +  D YT+   ++  C
Sbjct: 71  FGDMVKSRPF-PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFC 129

Query: 372 LSGRFSL----LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
              + SL    L K++  L  E D+V  ++LL+ +C +   + AV L + M++ G+ PD 
Sbjct: 130 RRSQLSLALAVLAKMM-KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 188

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
           ++F  L+ GL    K  EA+ +   +V      +   +  +V+ L + G    A+ L  +
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNK 248

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN 547
               +   +VV +   I  L +    E A  L+++M+   + PN  TY  ++   C    
Sbjct: 249 MEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGR 308

Query: 548 IKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKL 607
                RLL ++++ +I  +  T   L    FK      A     EM    + PD +   L
Sbjct: 309 WSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNL 368



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/278 (24%), Positives = 118/278 (42%), Gaps = 38/278 (13%)

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---V 383
           +  +L + LS +   DDA+D++  +++ +  P    F  LLS V    +F L+  L   +
Sbjct: 50  YREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM 109

Query: 384 CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
             L +  DL  Y+  ++ FC+    + A+ +   M+  G+ PD  +   LL G C +++I
Sbjct: 110 QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRI 169

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
            +A+                   A+VD+++E G                Y  D  ++T  
Sbjct: 170 SDAV-------------------ALVDQMVEMG----------------YKPDTFTFTTL 194

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           I GL    +  EA  L  QM      P+  TY  ++   CK  +I +   LL  +  ARI
Sbjct: 195 IHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARI 254

Query: 564 ELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           + +      +   + K+     AV+   EM   G+ P+
Sbjct: 255 KANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN 292


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 125/521 (23%), Positives = 234/521 (44%), Gaps = 69/521 (13%)

Query: 57  LLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGEL------ 110
           +L C +   AL  F   +++ D   + Q +  +I V+T     +   R ++ +L      
Sbjct: 44  ILTCRTANQALELFHSVSRRADLAKNPQLYSAIIHVLTG-AKLYAKARCLMRDLIQCLQN 102

Query: 111 ---ARVGCVIKAQTFLLFLRI---YWRGEMYGMVLEAFDEMG----------RFGFTPNT 154
              +R+ C +    F +  R+    +   ++G+++ AF EMG          +    P  
Sbjct: 103 SRRSRICCSV----FNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVLPAM 158

Query: 155 FARNIVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGM 210
            A N+V+D L K GR D   KV    +     PN +++   +   C+  D      +   
Sbjct: 159 QACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDE 218

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M+ K  +P V ++ IL+   C   RI+EA  +   M   G   ++  +  ++DG+ ++  
Sbjct: 219 MIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAH 278

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           +  A  L+++M+ +G  PNVVT+  LI G  +      A  FL  + S G  P++  +N 
Sbjct: 279 VKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNC 338

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA 390
           LID   K G+  +AL ++  + + +++PD +T+  L+  +C   R      L+  ++ + 
Sbjct: 339 LIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKG 398

Query: 391 ---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
              + V YN L+  +CK G   +A+++ + M +KG  P+  +F  L+ G C         
Sbjct: 399 FLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYC--------- 449

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
                                     +AG+   A+ L+   +++    DVV+YT  I G 
Sbjct: 450 --------------------------KAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGH 483

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
            + G T+EA+ L+ +M+   + PN +T   ++   CK+  I
Sbjct: 484 FKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRI 524



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 177/361 (49%), Gaps = 3/361 (0%)

Query: 204 VKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLID 263
           V++ + +  +    P ++   ++L+   K GR    +++ G M+  G S +V  +  LID
Sbjct: 142 VEEALWVYYKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLID 201

Query: 264 GFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP 323
           G  R      A  L+++M++    P VV YT LI+G       S A S    + + G  P
Sbjct: 202 GCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLP 261

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV 383
           +L  +N ++D   K+     AL++Y  +L   L+P+  TF  L+  +C +       K +
Sbjct: 262 NLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFL 321

Query: 384 CGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
             +    V  ++ VYN L+  +CKAG  ++A+ L++ +      PD +++  L++GLCG 
Sbjct: 322 IDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGV 381

Query: 441 RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSY 500
            +++EA  + Q +       NA  +  ++D   + G   KAI++  +   +    +++++
Sbjct: 382 DRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITF 441

Query: 501 TVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
           +  I G  + G+ E A  LY++M    + P+   Y  ++    K+ N K   RL +++ +
Sbjct: 442 STLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQE 501

Query: 561 A 561
           A
Sbjct: 502 A 502



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 95/387 (24%), Positives = 174/387 (44%), Gaps = 8/387 (2%)

Query: 71  IWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYW 130
           +W   + D    +Q+ + ++  + +  GRF+T+  + G++   G      T+   +    
Sbjct: 146 LWVYYKMDVLPAMQACNMVLDGLVK-KGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCC 204

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFL 186
           R   +      FDEM      P      I++  L    R+     + +  +    LPN  
Sbjct: 205 RQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLY 264

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           ++N  +   CK+  V    ++   M+  G  PNV  F IL++  CK   +  A + L  M
Sbjct: 265 TYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDM 324

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
            + G   ++  +  LIDG+ +   L  A  L  ++ ++   P+V TY+ LIKG       
Sbjct: 325 ASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRM 384

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
             A   L  ++ +G  P+ V +N LID   K G+ + A++V   + E  + P+  TF +L
Sbjct: 385 EEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTL 444

Query: 367 LSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           +   C +G+      L   + ++    D+V Y AL+    K G   +A +L+  M + G 
Sbjct: 445 IDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGL 504

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVY 450
            P+ ++   L+ GLC   +I +AI ++
Sbjct: 505 HPNVFTLSCLIDGLCKDGRISDAIKLF 531



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/359 (25%), Positives = 167/359 (46%), Gaps = 16/359 (4%)

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
           +  + N + VLI  F  +  ++ A +++ KM      P +     ++ G ++   F   +
Sbjct: 122 SKFTPNVFGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLVKKGRFDTMW 178

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
                + + G +P++V +  LID   + G +  A  ++D ++E K+ P    +  L+  +
Sbjct: 179 KVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGL 238

Query: 371 CLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           C   R S    +   +       +L  YN ++  +CK     +A++LY  ML  G  P+ 
Sbjct: 239 CGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNV 298

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIV-MNNPAV--NAHVHTAIVDRLIEAGRCHKAIQL 484
            +F  L+ GLC   K DE ++  + ++ M +  V  N  V+  ++D   +AG   +A+ L
Sbjct: 299 VTFGILIDGLC---KTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSL 355

Query: 485 FRRAIVEKYPL--DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
                +EK+ +  DV +Y++ I+GL    R EEA  L  +MK     PNA TY  ++  +
Sbjct: 356 HSE--IEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGY 413

Query: 543 CKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           CKE N++    +   + +  IE +  T   L     K     +A+    EM   GL+PD
Sbjct: 414 CKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPD 472



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 132/295 (44%), Gaps = 8/295 (2%)

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
           F+ L  LES    P++    VLI   S+MG  ++AL VY    ++ ++P       +L  
Sbjct: 113 FNVLSRLESSKFTPNVF--GVLIIAFSEMGLVEEALWVY---YKMDVLPAMQACNMVLDG 167

Query: 370 VCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
           +   GRF  + K+   +       ++V Y  L+   C+ G   +A +L++ M++K   P 
Sbjct: 168 LVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPT 227

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
              +  L+RGLCG  +I EA ++++ +  +    N + +  ++D   +     KA++L++
Sbjct: 228 VVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQ 287

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
             + +    +VV++ + I GL +      A      M    V PN + Y  ++  +CK  
Sbjct: 288 EMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAG 347

Query: 547 NIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           N+     L  ++    I  D  T   L K +        A   L EM   G +P+
Sbjct: 348 NLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPN 402



 Score = 40.4 bits (93), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 30/140 (21%), Positives = 62/140 (44%), Gaps = 4/140 (2%)

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
           K +  +++  GF P + +   L++ +   G +A+A+ +   +     S ++ +WT +I  
Sbjct: 651 KQMHALVINFGFEPIIFLQTSLISMYSATGNVADAHNMFDEI----PSKNLISWTSVISA 706

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
           +   +R + A  L+ +M  +   P++VT T  +    +     +       +   G   D
Sbjct: 707 YVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTD 766

Query: 325 LVFHNVLIDCLSKMGSYDDA 344
           L  +N LI+  SK G    A
Sbjct: 767 LCLNNSLINMYSKCGEIGTA 786



 Score = 39.7 bits (91), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 24/116 (20%), Positives = 58/116 (50%), Gaps = 4/116 (3%)

Query: 410 QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
           +  +++  +++ GF P  +    L+        + +A N++  I    P+ N    T+++
Sbjct: 649 EGKQMHALVINFGFEPIIFLQTSLISMYSATGNVADAHNMFDEI----PSKNLISWTSVI 704

Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKH 525
              ++  R +KA+QLFR+  ++    D+V+ TVA+    + G  +    +++ ++H
Sbjct: 705 SAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRH 760


>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
 gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
          Length = 969

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 119/485 (24%), Positives = 218/485 (44%), Gaps = 31/485 (6%)

Query: 104 RGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVM-- 161
           + I+  +   GC      F   +  Y     Y    +  + M   G  P     NI +  
Sbjct: 329 KRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGS 388

Query: 162 ----DVLFKIGRVDLGIKVLKE-----TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
               + L     + L  KV +E       L    + N A C LC +        +I +M+
Sbjct: 389 ICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARC-LCGMGKFDKAFQIIKLMM 447

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
           RKGF P+   +  ++   C+  ++ +A+ L   M ++G    V  +T+LID F ++  ++
Sbjct: 448 RKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIE 507

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A   +++M   GCSP+VVTYT+L+  +++ K    A      +   G AP+ + ++ L+
Sbjct: 508 QARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALV 567

Query: 333 DCLSKMGSYDDALDVY----------------DGLLELKLVPDSYTFCSLLSTVCLSGRF 376
           D L K G    A +VY                +G     + P+  T+ +L+  +C + + 
Sbjct: 568 DGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKV 627

Query: 377 SLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
               +L+  +     E + ++Y+AL+  FCK G  + A +++  M   G+ P  +++  L
Sbjct: 628 VDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSL 687

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           +  +   R++D AI V   ++ ++   N   +TA++D L   G C KA++L         
Sbjct: 688 IDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGC 747

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
             +VV+YT  I GL + G+ + +  L++QM      PN  TYRV++   C    +     
Sbjct: 748 NPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHS 807

Query: 554 LLQDV 558
           LL ++
Sbjct: 808 LLSEM 812



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 112/473 (23%), Positives = 207/473 (43%), Gaps = 58/473 (12%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV ++  +I    ++ G  E  R    E+  VGC     T+   L  Y + +      + 
Sbjct: 489 DVYTYTILIDSFCKV-GLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDI 547

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK--------------------ETQ 181
           F  M   G  PNT   + ++D L K G      +V                      ++ 
Sbjct: 548 FHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSI 607

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
            PN +++   +  LCK + V + ++++ +M   G  PN  +++ L++ FCK+G++  A +
Sbjct: 608 APNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQE 667

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           +   M   G   +V+ +T LID   + RRLD+A  +  +M+++ C+PNVVTYT++I G  
Sbjct: 668 VFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLC 727

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
                  A   L M+E  G  P++V +  LID L K G  D +L ++  ++     P   
Sbjct: 728 RIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAP--- 784

Query: 362 TFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
                                        + V Y  L+++ C AG  ++A  L + M   
Sbjct: 785 -----------------------------NYVTYRVLINHCCAAGLLDEAHSLLSEMKQT 815

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
            +      +  +++G   ++K   ++ + + +  +     A V+  ++D   +AGR  KA
Sbjct: 816 YWPKYVQGYCSVVQGF--SKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKA 873

Query: 482 IQLFRRAIVEKYPLDVVS---YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
           ++L +  +     L++ S   YT  I+ L    + E+A+ LYS++    V P 
Sbjct: 874 LELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPE 926



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 130/628 (20%), Positives = 245/628 (39%), Gaps = 77/628 (12%)

Query: 41  HQDFPIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRF 100
           H+DF   L   +V + L +  +  + + FF+W  +Q  Y H    ++ +  V+     R 
Sbjct: 98  HRDF---LNDAVVVAVLRSVRTPELCVRFFLWAERQVGYSHTGACYNALAEVL-HFDDRA 153

Query: 101 ETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIV 160
            T   ++ E+      +  +   + +R   R   +   LE    +  FG+ P+    N +
Sbjct: 154 RTTERLLREIGEDDREVLGRLLNVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNAL 213

Query: 161 MDVLFKIGRVDLGIKVLKETQLPNFLS-------FNIALCNLCKLNDVSNVKDVIGMMVR 213
           + VL   G++D+G +V KE     F +       F  ALC   + +D       + M+ R
Sbjct: 214 VQVLATAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKEGRWSDA------LVMIER 267

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           + F  +  +   +++   +     EA   L  M       +V  +  L+ GF + ++L  
Sbjct: 268 EDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGW 327

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
              +   M+  GC+PN   + SL+  +  A+ +  A+  L+ +   G  P  V +N+ I 
Sbjct: 328 CKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIG 387

Query: 334 -----------------------------------------CLSKMGSYDDALDVYDGLL 352
                                                    CL  MG +D A  +   ++
Sbjct: 388 SICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMM 447

Query: 353 ELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPN 409
               VPD+ T+  +++ +C + +     LL + +  + V  D+  Y  L+  FCK G   
Sbjct: 448 RKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIE 507

Query: 410 QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
           QA   ++ M   G +P   ++  LL      +++ +A +++  +V    A N   ++A+V
Sbjct: 508 QARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALV 567

Query: 470 DRLIEAGRCHKAIQLFRRAI----------------VEKYPLDVVSYTVAIRGLLEGGRT 513
           D L +AG   KA +++ + I                 +    +VV+Y   I GL +  + 
Sbjct: 568 DGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKV 627

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
            +A  L   M      PN   Y  ++  FCK   +   + +   +         HT   L
Sbjct: 628 VDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSL 687

Query: 574 TKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
              +FK      A+  L +M      P+
Sbjct: 688 IDAMFKDRRLDLAIKVLSQMLESSCTPN 715



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/283 (17%), Positives = 114/283 (40%), Gaps = 43/283 (15%)

Query: 79  YFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMV 138
           Y   V ++  +I  + +   R +    ++ ++    C     T+   +    R       
Sbjct: 677 YLPTVHTYTSLIDAMFK-DRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKA 735

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE--TQ--LPNFLSFNIALCN 194
           L+    M + G  PN      ++D L K G+VD+ +++  +  TQ   PN++++ + + +
Sbjct: 736 LKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINH 795

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPN----------------------------------V 220
            C    +     ++  M ++ ++P                                    
Sbjct: 796 CCAAGLLDEAHSLLSEM-KQTYWPKYVQGYCSVVQGFSKKFIASLGLLEELESHGMVSIA 854

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV---NAWTVLIDGFRRLRRLDMAGYL 277
            ++ +L++ F K GR+ +A +L   M+ + +SL++   + +T LI       +L+ A  L
Sbjct: 855 PVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFEL 914

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           + ++ + G  P +  +  LIKG ++   ++ A      +  EG
Sbjct: 915 YSEITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSMCDEG 957


>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Vitis vinifera]
          Length = 708

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 120/457 (26%), Positives = 211/457 (46%), Gaps = 10/457 (2%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G+ +    +V E+   G V   QT    L +     +  +    F EM + G +P+  + 
Sbjct: 168 GKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSF 227

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNL-----CKLNDVSNVKDVIGMMV 212
            +++     +GRV    + L       F+  N A C L     C+   V+ V      MV
Sbjct: 228 KLMVVACCNMGRVLEAERWLNAMVERGFIVDN-ATCTLIIDAFCQKGYVNRVVGYFWKMV 286

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
             G  PNV  F  L+N  CK G I +A++LL  M+  G   +V   T LIDG  +    +
Sbjct: 287 EMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTE 346

Query: 273 MAGYLWEKMVQ-NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
            A  L+ K+V+ +G  PNV TYT++I G+ +    + A   L  ++ +G  P+   +  L
Sbjct: 347 KAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTL 406

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV--- 388
           ID   K+G++  A ++ D + +    P+ YT+ +++  +C  G      +L+  + V   
Sbjct: 407 IDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGL 466

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
           +AD V Y  L+S  C+    N+++  +N ML  GFTPD +S+  L+   C  +++ E+  
Sbjct: 467 QADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESER 526

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           +++  V          +T+++      G    A++LF+R        D ++Y   I GL 
Sbjct: 527 LFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLC 586

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
           +  + ++A  LY  M    + P   T   +   +CK+
Sbjct: 587 KESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKK 623



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 114/473 (24%), Positives = 207/473 (43%), Gaps = 49/473 (10%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSN 203
           EM   G  P+T   N V+DV   +G V++   +  E                        
Sbjct: 179 EMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVE------------------------ 214

Query: 204 VKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLID 263
                  M ++G  P+   F++++   C MGR+ EA + L  M+  G  +     T++ID
Sbjct: 215 -------MCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIID 267

Query: 264 GFRRLRRLD-MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
            F +   ++ + GY W KMV+ G +PNV+ +T+LI G  +      AF  L+ +   G  
Sbjct: 268 AFCQKGYVNRVVGYFW-KMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWK 326

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV------PDSYTFCSLLSTVCLSGRF 376
           P++  H  LID L K G  + A  ++     LKLV      P+ +T+ ++++  C   + 
Sbjct: 327 PNVYTHTTLIDGLCKKGWTEKAFRLF-----LKLVRSDGYKPNVHTYTAMINGYCKEDKL 381

Query: 377 SLLPKLVCGLEVEADLV----VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
           +    L+  ++ E  LV     Y  L+   CK G   +A +L + M  +GF+P+ Y++  
Sbjct: 382 NRAEMLLSRMQ-EQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNA 440

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           ++ GLC    +DEA  +   + ++    +   +T ++         ++++  F + +   
Sbjct: 441 IIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVG 500

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVK 552
           +  D+ SYT  I       + +E+  L+ +   + + P   TY  M+  +C+  N  +  
Sbjct: 501 FTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAV 560

Query: 553 RLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWR 605
           +L Q + +     D  T   L   + K      A N    M + GL P E+ R
Sbjct: 561 KLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTR 613



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 112/483 (23%), Positives = 206/483 (42%), Gaps = 19/483 (3%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
           QR    D  SF  M+     +    E  R +   + R G ++   T  L +  + +    
Sbjct: 217 QRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVER-GFIVDNATCTLIIDAFCQKGYV 275

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET----QLPNFLSFNIA 191
             V+  F +M   G  PN      +++ L K G +    ++L+E       PN  +    
Sbjct: 276 NRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTL 335

Query: 192 LCNLCKLNDVSNVKDVIGMMVRK-GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
           +  LCK         +   +VR  G+ PNV  +  ++N +CK  ++  A  LL  M   G
Sbjct: 336 IDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQG 395

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
              + N +T LIDG  ++     A  L + M + G SPN+ TY ++I G  +      A+
Sbjct: 396 LVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAY 455

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
             L+ +   G   D V + +L+    +    + +L  ++ +L++   PD +++ +L+ST 
Sbjct: 456 RLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTF 515

Query: 371 CLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           C   +     +L      L +      Y +++  +C+ G  + AVKL+  M + G  PD+
Sbjct: 516 CRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDS 575

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
            ++  L+ GLC   K+D+A N+Y  ++    +        +     +      AI +  R
Sbjct: 576 ITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDR 635

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF---CK 544
               ++   + +    +R L   G+ + A + + ++  +   PN    RV LL F   C 
Sbjct: 636 LEKRQW---IRTVNTLVRKLCSEGKLDMAALFFHKL--LDKEPNV--NRVTLLGFMNKCY 688

Query: 545 ERN 547
           E N
Sbjct: 689 ESN 691



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 89/380 (23%), Positives = 159/380 (41%), Gaps = 40/380 (10%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIK-----VLKETQLPNFLSFNIAL 192
             E  +EM R G+ PN +    ++D L K G  +   +     V  +   PN  ++   +
Sbjct: 313 AFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMI 372

Query: 193 CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
              CK + ++  + ++  M  +G  PN   +  L++  CK+G    AY+L+ LM   G S
Sbjct: 373 NGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFS 432

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
            ++  +  +IDG  +   LD A  L  K+  +G   + VTYT L+         + +  F
Sbjct: 433 PNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVF 492

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
            + +   G  PD+  +  LI    +     ++  +++  + L L+P   T+ S++   C 
Sbjct: 493 FNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCR 552

Query: 373 SGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP---- 425
            G  SL  KL   +       D + Y AL+S  CK    + A  LY+ M+DKG +P    
Sbjct: 553 YGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVT 612

Query: 426 ------------DNYSFVGLL----------------RGLCGARKIDEAINVYQGIVMNN 457
                       D+ + + +L                R LC   K+D A   +  ++   
Sbjct: 613 RLTLAYEYCKKDDSSTAINVLDRLEKRQWIRTVNTLVRKLCSEGKLDMAALFFHKLLDKE 672

Query: 458 PAVNAHVHTAIVDRLIEAGR 477
           P VN       +++  E+ +
Sbjct: 673 PNVNRVTLLGFMNKCYESNK 692


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 117/515 (22%), Positives = 225/515 (43%), Gaps = 18/515 (3%)

Query: 109 ELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIG 168
           E+ R+ C I   +F + ++ +         L  F ++ + GF P+    + ++  L    
Sbjct: 103 EMRRIPCNI--YSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVED 160

Query: 169 RVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLN 228
           RV   +    +   PN ++F   +  LC+   V     ++  MV  G  PN   +  +++
Sbjct: 161 RVSEALHFFHQICKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVD 220

Query: 229 CFCKMGRIAEAYQLLGLMITLG-TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCS 287
             CKMG    A  LL  M  +     +V  ++ +IDG  +  R   A  L+ +M + G S
Sbjct: 221 GMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGIS 280

Query: 288 PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
           PN+ TY  +I GF  +  +S A   L  +     +PD+V  +VLI+ L K G + +A ++
Sbjct: 281 PNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEEL 340

Query: 348 YDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPK---LVCGLEVEADLVVYNALLSYFCK 404
           Y+ +L   ++P++ T+ S++       R     +   L+       D++ ++ L+  +C 
Sbjct: 341 YNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCG 400

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV 464
           A   +  +KL + M  +G   +  ++  L+ G C    ++ A+++ Q ++ +    N   
Sbjct: 401 AKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVT 460

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL-----------DVVSYTVAIRGLLEGGRT 513
              ++D L   G+   A+++F+     K  L           DV +Y + I GL+  G+ 
Sbjct: 461 CNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKF 520

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
            EA  LY +M H  + P+  TY  ++   CK+  +    ++   +       D  T   L
Sbjct: 521 SEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTL 580

Query: 574 TKFIFKFHSSSSAVNQLVEMCNLGLIPDEM-WRKL 607
                K       +    EM   G++ + + +R L
Sbjct: 581 INGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTL 615



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 108/434 (24%), Positives = 194/434 (44%), Gaps = 28/434 (6%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALC 193
           +L   +E+ R    PN    + ++D L+K GR      +  E Q     PN  ++N  + 
Sbjct: 234 LLRKMEEVSRI--KPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMIN 291

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
             C     S  + ++  M  +   P+V  F +L+N   K G+  EA +L   M+  G   
Sbjct: 292 GFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIP 351

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
           +   +  +IDGF +  RLD A  ++  M   GCSP+V+T++ LI G+  AK        L
Sbjct: 352 NTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLL 411

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
             +   G   + + +  LI    ++G+ + ALD+   ++   + P+  T  +LL  +C +
Sbjct: 412 HEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNN 471

Query: 374 GR-------FSLLPKLVCGL-------EVEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
           G+       F ++ K    L       +VE D+  YN L+      G  ++A +LY  M 
Sbjct: 472 GKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMP 531

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
            +G  PD  ++  ++ GLC   ++DEA  ++  +     + +    T +++   + GR  
Sbjct: 532 HRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVG 591

Query: 480 KAIQLF----RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
             +++F    RR IV     + ++Y   I G  + G    A  ++ +M    V P+  T 
Sbjct: 592 DGLEVFCEMGRRGIVA----NAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITI 647

Query: 536 RVMLLSFCKERNIK 549
           R ML     +  +K
Sbjct: 648 RNMLTGLWSKEELK 661



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/457 (24%), Positives = 209/457 (45%), Gaps = 24/457 (5%)

Query: 136 GMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ-----LPNFLS 187
           G V+EA    D M   G  PN      ++D + K+G     + +L++ +      PN + 
Sbjct: 191 GRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVI 250

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           ++  +  L K    ++ +++   M  KG  PN+  +  ++N FC  GR +EA +LL  M 
Sbjct: 251 YSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMF 310

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
               S  V  ++VLI+   +  +   A  L+ +M+  G  PN +TY S+I GF +     
Sbjct: 311 ERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLD 370

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A     ++ ++G +PD++  ++LID        DD + +   +    LV ++ T+ +L+
Sbjct: 371 AAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLI 430

Query: 368 STVC----LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM----- 418
              C    L+    LL +++    V  ++V  N LL   C  G    A++++  M     
Sbjct: 431 HGFCQLGNLNAALDLLQEMISS-GVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKM 489

Query: 419 -LDKG-----FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
            LD         PD  ++  L+ GL    K  EA  +Y+ +       +   + +++D L
Sbjct: 490 DLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGL 549

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
            +  R  +A Q+F     + +  DVV++T  I G  + GR  +   ++ +M    +  NA
Sbjct: 550 CKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANA 609

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
            TYR ++  FC+  NI     + Q++I + +  D  T
Sbjct: 610 ITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTIT 646



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 90/365 (24%), Positives = 150/365 (41%), Gaps = 49/365 (13%)

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           L  GF  ++ LD A  L+  MV++   P V+ +  L+   +  +   +  S    +E   
Sbjct: 47  LQSGFHEIKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRR 106

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
              ++    +LI C         AL  +  + +L   P   TF +LL  +C+  R S   
Sbjct: 107 IPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVS--- 163

Query: 381 KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
                   EA        L +F      +Q  K           P+  +F  L+ GLC  
Sbjct: 164 --------EA--------LHFF------HQICK-----------PNVIAFTTLMNGLCRE 190

Query: 441 RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR-AIVEKYPLDVVS 499
            ++ EA+ +   +V +    N   +  IVD + + G    A+ L R+   V +   +VV 
Sbjct: 191 GRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVI 250

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           Y+  I GL + GR  +A  L+S+M+   + PN +TY  M+  FC        +RLL+++ 
Sbjct: 251 YSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMF 310

Query: 560 DARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTPVS 619
           + ++  D  T   L   + K      A     EM   G+IP+            T+T  S
Sbjct: 311 ERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPN------------TITYNS 358

Query: 620 LFDGF 624
           + DGF
Sbjct: 359 MIDGF 363


>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
 gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
 gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 123/492 (25%), Positives = 230/492 (46%), Gaps = 23/492 (4%)

Query: 65  IALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLL 124
           +AL FF   A    + H   +F+ MI  +  + G+ ++V+ ++ ++   G       F+ 
Sbjct: 58  LALHFFKSIANSNLFKHTPLTFEVMIRKLA-MDGQVDSVQYLLQQMKLQGFHCSEDLFIS 116

Query: 125 FLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-- 182
            + +Y +  +    +E F  +  FG  P+    N V+D L    R+ +   V ++ +   
Sbjct: 117 VISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDG 176

Query: 183 --PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAY 240
             PN  ++N+ L  LCK N V   K ++  M  KG  P+   +  +++  C++G + E  
Sbjct: 177 FEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGR 236

Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
           +L      +     V+ +  LI+G  +      A  L  +MV+ G SPNV++Y++LI   
Sbjct: 237 ELAERFEPV-----VSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVL 291

Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE-LKLVPD 359
             +    +AFSFL  +   G  P++   + L+      G+  DALD+++ ++    L P+
Sbjct: 292 CNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPN 351

Query: 360 SYTFCSLLSTVCLSGR-------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAV 412
              + +L+   C  G        FS + ++ C      ++  Y +L++ F K G  + AV
Sbjct: 352 VVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCS----PNIRTYGSLINGFAKRGSLDGAV 407

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
            ++N ML  G  P+   +  ++  LC   K  EA ++ + +   N A +     A +  L
Sbjct: 408 YIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGL 467

Query: 473 IEAGRCHKAIQLFRRAIVE-KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
            +AGR   A ++FR+   + + P ++V+Y   + GL +  R EEAY L  ++    V  +
Sbjct: 468 CDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWS 527

Query: 532 AYTYRVMLLSFC 543
           + TY  +L   C
Sbjct: 528 SSTYNTLLHGSC 539



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 180/418 (43%), Gaps = 44/418 (10%)

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNI 190
           Y    E   EM   G +PN  + + +++VL   G+++L      ++LK    PN  + + 
Sbjct: 262 YKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLS- 320

Query: 191 ALCNLCKLNDVS-NVKDVIGMMVRK-GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           +L   C L   + +  D+   M+R  G  PNV  +  L+  FC  G I +A  +   M  
Sbjct: 321 SLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEE 380

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
           +G S ++  +  LI+GF +   LD A Y+W KM+ +GC PNVV YT++++       F  
Sbjct: 381 IGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKE 440

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL-KLVPDSYTFCSLL 367
           A S ++++  E  AP +   N  I  L   G  D A  V+  + +  +  P+  T+  LL
Sbjct: 441 AESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELL 500

Query: 368 STVCLSGRFSL---LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
             +  + R      L + +    VE     YN LL   C AG P  A++L   M+  G +
Sbjct: 501 DGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKS 560

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           PD  +   ++   C   K + A  +                      L+  GR       
Sbjct: 561 PDEITMNMIILAYCKQGKAERAAQMLD--------------------LVSCGR------- 593

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
                  K+  DV+SYT  I GL      E+  IL  +M    + P+  T+ V++  F
Sbjct: 594 ------RKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCF 645



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 93/454 (20%), Positives = 185/454 (40%), Gaps = 70/454 (15%)

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGL 245
           L+F + +  L     V +V+ ++  M  +GF+ +  +F  +++ + ++G    A ++   
Sbjct: 77  LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 136

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           +   G   SV  +  ++D      R+ M   ++  M ++G  PNV TY  L+K   +   
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 196

Query: 306 FSIAFSFLDMLESEGHAPDLV------------------------------FHNVLIDCL 335
              A   L  + ++G  PD V                               +N LI+ L
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGL 256

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLP----------- 380
            K   Y  A ++   ++E  + P+  ++ +L++ +C SG+    FS L            
Sbjct: 257 CKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNI 316

Query: 381 ------------------------KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYN 416
                                   +++ G  ++ ++V YN L+  FC  G   +AV +++
Sbjct: 317 YTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFS 376

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
            M + G +P+  ++  L+ G      +D A+ ++  ++ +    N  V+T +V+ L    
Sbjct: 377 HMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHS 436

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI-AVPPNAYTY 535
           +  +A  L      E     V ++   I+GL + GR + A  ++ QM+     PPN  TY
Sbjct: 437 KFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTY 496

Query: 536 RVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
             +L    K   I+    L +++    +E    T
Sbjct: 497 NELLDGLAKANRIEEAYGLTREIFMRGVEWSSST 530



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 75/366 (20%), Positives = 138/366 (37%), Gaps = 81/366 (22%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLR-IYWRGEMYGMVLE 140
           +V S+  +I+V+   +G+ E     + ++ + GC     T    ++  + RG  +   L+
Sbjct: 280 NVISYSTLINVLCN-SGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFD-ALD 337

Query: 141 AFDEMGR-FGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNL 195
            +++M R FG  PN  A N ++      G +   + V    +     PN  ++   +   
Sbjct: 338 LWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGF 397

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
            K   +     +   M+  G  PNV ++  ++   C+  +  EA  L+ +M     + SV
Sbjct: 398 AKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSV 457

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKM-VQNGCSPNVVTYTSLIKG--------------- 299
             +   I G     RLD A  ++ +M  Q+ C PN+VTY  L+ G               
Sbjct: 458 PTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTR 517

Query: 300 --FMEAKMFS------------------IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
             FM    +S                  IA   +  +  +G +PD +  N++I    K G
Sbjct: 518 EIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQG 577

Query: 340 SYDDA---LDVY----------------------------DGLLELK------LVPDSYT 362
             + A   LD+                             DG++ L+      +VP   T
Sbjct: 578 KAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIAT 637

Query: 363 FCSLLS 368
           +  L++
Sbjct: 638 WSVLIN 643



 Score = 46.6 bits (109), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 47/228 (20%), Positives = 97/228 (42%), Gaps = 10/228 (4%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           +V  + +M+  + R + +F+    ++  +++  C     TF  F++            + 
Sbjct: 421 NVVVYTNMVEALCRHS-KFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKV 479

Query: 142 FDEM-GRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF----LSFNIALCNLC 196
           F +M  +    PN    N ++D L K  R++    + +E  +        ++N  L   C
Sbjct: 480 FRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSC 539

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL--- 253
                     ++G M+  G  P+     +++  +CK G+   A Q+L L ++ G      
Sbjct: 540 NAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDL-VSCGRRKWRP 598

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
            V ++T +I G  R    +    L E+M+  G  P++ T++ LI  F+
Sbjct: 599 DVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFI 646


>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Brachypodium distachyon]
          Length = 673

 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 133/552 (24%), Positives = 235/552 (42%), Gaps = 61/552 (11%)

Query: 136 GMVLEAFDEMG-RFGFTPNTFARNIVMDVLFKIGRVDLGIKVL--------KETQLPNFL 186
           G  L   D++  RF  +P+  + N V   L    R D    VL        ++   P   
Sbjct: 117 GRALHLLDQLPHRFAVSPSFRSYNTV---LAAFARADCHTDVLSLYRRMVHRDRVPPTTF 173

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           +F+IA   LC+L        ++  M R G  P+  +++ +++  C  G + EA  LL  M
Sbjct: 174 TFSIAARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEM 233

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
             +G S  VN +  ++ G   L RL  A  L ++M+  GC PN +TY  L+KG   A   
Sbjct: 234 FLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQV 293

Query: 307 SIAFSFL-------------------------------DMLESEGHAPDLVFHNVLIDCL 335
             A + L                               + + S+G  PD   +++LI  L
Sbjct: 294 EEARTMLGRVPELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGL 353

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEAD---- 391
            K+G    A+ +   + +    P   T+  LL + C +G +  +  +   LEV +D    
Sbjct: 354 CKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAM---LEVMSDKGLS 410

Query: 392 --LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
             L  YN ++   CK    + A++    M  +G+ PD  ++  ++  LC   +++EA  +
Sbjct: 411 MNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYL 470

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
           ++ ++      NA  +  ++  L+  G    AI L    ++    LD+VSY   I+ L  
Sbjct: 471 FENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCR 530

Query: 510 GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
            G  + + +L S+M    + PN  +Y +++   CK R ++    L +++++  +  D  T
Sbjct: 531 DGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVT 590

Query: 570 SIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM-------WR-KLGLLSDETM-TPVSL 620
              L   + K     +A+N L ++ N  +  D +       W  K  LL D +M    ++
Sbjct: 591 YNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARLLHDASMLLNRAV 650

Query: 621 FDGFVPCERRAG 632
             G  P ER  G
Sbjct: 651 TSGITPNERTWG 662



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 111/493 (22%), Positives = 219/493 (44%), Gaps = 52/493 (10%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA---FDEMGRFGFTPNT 154
           GR +    ++  +AR GCV      +L+  +       G V EA    DEM   G + + 
Sbjct: 186 GRADEALTMLRSMARHGCVPDT---VLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADV 242

Query: 155 FARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIG- 209
              N ++  L  +GR+    +++    +    PN +++   L  LC  + V   + ++G 
Sbjct: 243 NTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTMLGR 302

Query: 210 ------------------------------MMVRKGFYPNVRMFEILLNCFCKMGRIAEA 239
                                          M  KG  P+   + IL++  CK+GR+  A
Sbjct: 303 VPELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSA 362

Query: 240 YQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG 299
            +LL  M   G + S+  +T+L+  F R    D    + E M   G S N+  Y  +I  
Sbjct: 363 MKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICA 422

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
             + +    A  F+  ++S+G+ PD+  +N +I  L      ++A  +++ LL   +V +
Sbjct: 423 VCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVAN 482

Query: 360 SYTFCSLLSTVCLSGRF----SLLPKLV---CGLEVEADLVVYNALLSYFCKAGFPNQAV 412
           + T+ +L+  +  +G +    SL   +V   C L    D+V YN L+   C+ G  ++++
Sbjct: 483 AITYNTLIHALLRNGSWQDAISLANDMVLHGCSL----DIVSYNGLIKALCRDGNVDRSI 538

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
            L + M +KG  P+N S+  L+  LC  R++ +A+ + + ++      +   +  +++ L
Sbjct: 539 MLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGL 598

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
            + G  H A+ L  +   E    D+++Y + I    +     +A +L ++     + PN 
Sbjct: 599 CKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARLLHDASMLLNRAVTSGITPNE 658

Query: 533 YTYRVMLLSFCKE 545
            T+ +M+ +F ++
Sbjct: 659 RTWGIMVQNFVRK 671



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 151/344 (43%), Gaps = 11/344 (3%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           L G+ +    +   +   GC   A T+ + +    +    G  ++   EM   GF P+  
Sbjct: 320 LDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIV 379

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIA-----LCNLCKLNDVSNVKDVIGM 210
              I++    + G  D  I+ + E      LS N+      +C +CK   + +    +  
Sbjct: 380 TYTILLHSFCRNGMWD-NIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQE 438

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M  +G+ P++  +  ++   C   ++ EA  L   ++  G   +   +  LI    R   
Sbjct: 439 MKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGS 498

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
              A  L   MV +GCS ++V+Y  LIK          +   L  +  +G  P+ V +N+
Sbjct: 499 WQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNL 558

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG----RFSLLPKLVCGL 386
           LI  L K     DAL++   +L  +L PD  T+ +L++ +C  G      +LL KL    
Sbjct: 559 LISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLH-NE 617

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           +V AD++ YN L+S+ CKA   + A  L N  +  G TP+  ++
Sbjct: 618 DVHADIITYNILISWHCKARLLHDASMLLNRAVTSGITPNERTW 661



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/187 (18%), Positives = 85/187 (45%), Gaps = 5/187 (2%)

Query: 85  SFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDE 144
           +++ +I  + R  G ++    +  ++   GC +   ++   ++   R       +    E
Sbjct: 485 TYNTLIHALLR-NGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSE 543

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLND 200
           M   G  PN  + N+++  L K  RV    +L  ++L +   P+ +++N  +  LCK+  
Sbjct: 544 MAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGW 603

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
           +    +++  +  +  + ++  + IL++  CK   + +A  LL   +T G + +   W +
Sbjct: 604 MHAALNLLEKLHNEDVHADIITYNILISWHCKARLLHDASMLLNRAVTSGITPNERTWGI 663

Query: 261 LIDGFRR 267
           ++  F R
Sbjct: 664 MVQNFVR 670


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 113/431 (26%), Positives = 202/431 (46%), Gaps = 41/431 (9%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+  + N  L +L K N+V     V  +M   G  P+V +F  ++N FC  GR+ +A +L
Sbjct: 160 PSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIEL 219

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
              M  +G + +V  +  +I G  +  RLD A    EKM +    P++VTY  LI G ++
Sbjct: 220 FRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVK 279

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
            + F  A   L  +   G+AP+ V +N LID   ++G+   AL + D ++   + P+S T
Sbjct: 280 LERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVT 339

Query: 363 FCSLLSTVCLSGRFS----LLPKLVCGLEV--------------------EADLVVYNAL 398
             SL+   C S +      LL +++ G  V                     A L +   L
Sbjct: 340 CNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEML 399

Query: 399 LSYF--------------CKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
           L  F              C+ G  ++A++L+  +L+KGF  +  +   L+ GLC A   +
Sbjct: 400 LRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKE 459

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
           EA  + + ++     +++  +  ++    + G+  +  +L    +      D+ +Y + +
Sbjct: 460 EAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLL 519

Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
            GL   G+ EEA  L+ + K     P+AYTY +M+  +CK   ++  ++L Q+++  +IE
Sbjct: 520 HGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIE 579

Query: 565 LD---YHTSIR 572
            +   Y T IR
Sbjct: 580 QNAVVYGTLIR 590



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 122/506 (24%), Positives = 217/506 (42%), Gaps = 42/506 (8%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALC 193
            +E F +M + G  PN    N ++  L K GR+D       K+ KE   P+ +++ + + 
Sbjct: 216 AIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLIN 275

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
            L KL        ++  M  +G+ PN  ++  L++ +C++G I+ A Q+   MI+ G S 
Sbjct: 276 GLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISP 335

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
           +      LI G+ +  +++ A +L E+M+  G   N  T+TS+I        F  A  F+
Sbjct: 336 NSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFI 395

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
             +      P+     +L+  L + G   +A++++  LLE     ++ T  +L+  +C +
Sbjct: 396 MEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEA 455

Query: 374 GRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           G      KL+  +       D + YN L+   CK G   +  KL   M+ +G  PD Y++
Sbjct: 456 GSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTY 515

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             LL GLC   KI+EA  ++     N    +A+ +  ++D   +A R  +  +LF+  + 
Sbjct: 516 NMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVT 575

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP--------------------- 529
            K   + V Y   IR   E G   EA+ L   M+   +P                     
Sbjct: 576 MKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDS 635

Query: 530 --------------PNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTK 575
                         PN   Y  ++  +CK   +  V  +LQ++    +  +  T   +  
Sbjct: 636 ANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMIN 695

Query: 576 FIFKFHSSSSAVNQLVEMCNLGLIPD 601
              K  +  +A   L EM   G++PD
Sbjct: 696 GHCKLGNMKAAAKLLNEMAQKGIVPD 721



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 93/369 (25%), Positives = 181/369 (49%), Gaps = 3/369 (0%)

Query: 204 VKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLID 263
           V ++  ++  KG +P+++    LL+   K   +  +YQ+  +M   G +  V  ++ +++
Sbjct: 146 VFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVN 205

Query: 264 GFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP 323
            F    R+D A  L+ KM + G +PNVVTY ++I G  +      AF F + +E E   P
Sbjct: 206 AFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKP 265

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL- 382
            LV + VLI+ L K+  +D+A  +   + +    P++  + +L+   C  G  S   ++ 
Sbjct: 266 SLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIR 325

Query: 383 --VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
             +    +  + V  N+L+  +CK+     A  L   ML  G   +  +F  ++  LC  
Sbjct: 326 DDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLK 385

Query: 441 RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSY 500
            + D A+     +++ N   N  + T +V  L + G+  +AI+L+ R + + +  + V+ 
Sbjct: 386 CRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTS 445

Query: 501 TVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
              I GL E G  EEA  L  +M    +  ++ +Y  ++L+ CKE  ++   +L ++++ 
Sbjct: 446 NALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVR 505

Query: 561 ARIELDYHT 569
             I+ D +T
Sbjct: 506 RGIQPDMYT 514



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 106/493 (21%), Positives = 207/493 (41%), Gaps = 54/493 (10%)

Query: 139 LEAFDE-------MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIA 191
           LE FDE       M   G+ PN    N ++D   +IG +   +++ ++  + N +S N  
Sbjct: 280 LERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQI-RDDMISNGISPNSV 338

Query: 192 LCN-----LCKLNDVSNVKDVIGMMVRKG------------------------------- 215
            CN      CK N + + + ++  M+  G                               
Sbjct: 339 TCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEM 398

Query: 216 ----FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
               F PN  +  +L++  C+ G+ +EA +L   ++  G + +      LI G       
Sbjct: 399 LLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSK 458

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           + A  L ++M++ G   + ++Y +LI    +       F   + +   G  PD+  +N+L
Sbjct: 459 EEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNML 518

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEV 388
           +  L  MG  ++A  ++    +    PD+YT+  ++   C + R     KL   +  +++
Sbjct: 519 LHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKI 578

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
           E + VVY  L+  +C+ G   +A +L + M  +G    + ++  L+ GL     +D A  
Sbjct: 579 EQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQ 638

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           +   +     + N   +TA++    + G+ HK   + +   +     + ++YT+ I G  
Sbjct: 639 LLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHC 698

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
           + G  + A  L ++M    + P+A TY  +   FCKE  ++   ++   +    I LD  
Sbjct: 699 KLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLD-- 756

Query: 569 TSIRLTKFIFKFH 581
             I  T  I  +H
Sbjct: 757 -DITYTTLIDGWH 768



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 75/308 (24%), Positives = 137/308 (44%), Gaps = 39/308 (12%)

Query: 136 GMVLEAF---DEMGRFGFTPNTFARNIVMDVLFKIGRVD----LGIKVLKETQLPNFLSF 188
           G V E F   +EM R G  P+ +  N+++  L  +G+++    L  +  K    P+  ++
Sbjct: 491 GKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTY 550

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
            I +   CK N V   + +   MV      N  ++  L+  +C+ G + EA++L   M +
Sbjct: 551 GIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRS 610

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
            G   +   ++ LI G   +  +D A  L ++M + G SPNVV YT+LI G+ +      
Sbjct: 611 RGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHK 670

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
             S L  +      P+ + + ++I+   K+G+   A  + + + +  +VPD+ T      
Sbjct: 671 VDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVT------ 724

Query: 369 TVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
                                     YNAL + FCK G   +A+K+ + M   G + D+ 
Sbjct: 725 --------------------------YNALTNGFCKEGKMEEALKVCDLMSTGGISLDDI 758

Query: 429 SFVGLLRG 436
           ++  L+ G
Sbjct: 759 TYTTLIDG 766



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 91/202 (45%)

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
           N LLS   KA     + ++++ M   G TPD Y F  ++   C   ++D+AI +++ +  
Sbjct: 166 NFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEK 225

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
              A N   +  I+  L + GR  +A Q   +   E+    +V+Y V I GL++  R +E
Sbjct: 226 VGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDE 285

Query: 516 AYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTK 575
           A  +  +M      PN   Y  ++  +C+  NI    ++  D+I   I  +  T   L +
Sbjct: 286 ANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQ 345

Query: 576 FIFKFHSSSSAVNQLVEMCNLG 597
              K +    A + L EM   G
Sbjct: 346 GYCKSNQMEHAEHLLEEMLTGG 367



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 4/132 (3%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNL 195
           +  DEM + G +PN      ++    K+G++     +L+E  +    PN +++ I +   
Sbjct: 638 QLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGH 697

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
           CKL ++     ++  M +KG  P+   +  L N FCK G++ EA ++  LM T G SL  
Sbjct: 698 CKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDD 757

Query: 256 NAWTVLIDGFRR 267
             +T LIDG+ +
Sbjct: 758 ITYTTLIDGWHK 769



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/245 (22%), Positives = 104/245 (42%), Gaps = 14/245 (5%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNT--- 154
           G+ E   G+  E  + G    A T+ + +  Y +        + F EM       N    
Sbjct: 526 GKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVY 585

Query: 155 ------FARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVI 208
                 +  N  M   F++ R D+  + + +T      +++  +  L  +  V +   ++
Sbjct: 586 GTLIRAYCENGNMREAFRL-RDDMRSRGIPQTSA----TYSSLIHGLSNIGLVDSANQLL 640

Query: 209 GMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRL 268
             M ++G  PNV  +  L+  +CK+G++ +   +L  M       +   +T++I+G  +L
Sbjct: 641 DEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKL 700

Query: 269 RRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH 328
             +  A  L  +M Q G  P+ VTY +L  GF +      A    D++ + G + D + +
Sbjct: 701 GNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITY 760

Query: 329 NVLID 333
             LID
Sbjct: 761 TTLID 765



 Score = 42.0 bits (97), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 29/136 (21%), Positives = 56/136 (41%)

Query: 468 IVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIA 527
           ++  L++A     + Q+F          DV  ++  +     GGR ++A  L+ +M+ + 
Sbjct: 168 LLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVG 227

Query: 528 VPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAV 587
           V PN  TY  ++   CK   +    +  + +   R++    T   L   + K      A 
Sbjct: 228 VAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEAN 287

Query: 588 NQLVEMCNLGLIPDEM 603
             L EM + G  P+ +
Sbjct: 288 CILKEMSDRGYAPNNV 303


>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 657

 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 123/489 (25%), Positives = 226/489 (46%), Gaps = 17/489 (3%)

Query: 65  IALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLL 124
           +AL FF   A    + H   +F+ MI  +  + G+ ++V+ ++ ++   G       F+ 
Sbjct: 57  LALHFFKSIANSNLFKHTPLTFEVMIRKLA-MDGQVDSVQYLLQQMKLQGFHCSEDLFIS 115

Query: 125 FLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-- 182
            + +Y +  +    +E F  +  FG  P+    N V+D L    R+ +   V ++ +   
Sbjct: 116 VISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDG 175

Query: 183 --PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAY 240
             PN  ++N+ L  LCK N V   K ++  M  KG  PN   +  +++  C++G + E  
Sbjct: 176 FEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGR 235

Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
           QL      +     V+ +  LI+G  + R       L  +MV+ G SPNV++Y++LI   
Sbjct: 236 QLAERFEPV-----VSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINEL 290

Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE-LKLVPD 359
             +    +AFS L  +   G  P++   + L+      G+  DALD+++ ++    L P+
Sbjct: 291 SNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPN 350

Query: 360 SYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYN 416
              + +L+   C  G       +   +E      ++  Y +L++ F K G    AV ++N
Sbjct: 351 VVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWN 410

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
            ML  G  P+   +  ++  LC   K  EA ++ + +   N A +     A +  L +AG
Sbjct: 411 KMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAG 470

Query: 477 RCHKAIQLFRRAIVEKY--PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
           R   A ++FR+ + ++Y  P ++V+Y   + GL +  R EEAY L  ++    V  +  T
Sbjct: 471 RLDWAEKVFRQ-MEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTST 529

Query: 535 YRVMLLSFC 543
           Y  +L   C
Sbjct: 530 YNTLLHGSC 538



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 109/417 (26%), Positives = 180/417 (43%), Gaps = 51/417 (12%)

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCN 194
           +E   EM   G +PN  + + +++ L   G+++L      ++LK    PN  + + +L  
Sbjct: 265 VELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLS-SLVK 323

Query: 195 LCKLNDVS-NVKDVIGMMVRK-GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
            C +   + +  D+   M+R  G  PNV  +  L+  FC  G I +A  +   M  +G S
Sbjct: 324 GCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCS 383

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
            ++  +  LI+GF +   L+ A Y+W KM+ +GC PNVV YTS+++       F  A S 
Sbjct: 384 PNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESL 443

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGL-LELKLVPDSYTFCSLLSTVC 371
           ++++  E  AP +   N  I  L   G  D A  V+  +  + +  P+  T+  LL  + 
Sbjct: 444 IEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLA 503

Query: 372 LSGRFSL---LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
            + R      L + +    VE     YN LL   C AG P  A++L   M+  G +PD  
Sbjct: 504 KANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEI 563

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
           +   ++   C   K + A+ +                      L+  GR           
Sbjct: 564 TMNMIILAYCKQGKAERAVQMLD--------------------LVSCGR----------- 592

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
              K+  DV+SYT  I GL      E+  IL+ +M    + P       +L S C+E
Sbjct: 593 --RKWRPDVISYTNVIWGLCRSNCREDGVILFERMISERIIP-------ILRSVCQE 640



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 109/525 (20%), Positives = 213/525 (40%), Gaps = 87/525 (16%)

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGL 245
           L+F + +  L     V +V+ ++  M  +GF+ +  +F  +++ + ++G    A ++   
Sbjct: 76  LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 135

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           +   G   SV  +  ++D      R+ M   ++  M ++G  PNV TY  L+K   +   
Sbjct: 136 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 195

Query: 306 FSIAFSFLDMLESEGHAPDLV------------------------------FHNVLIDCL 335
              A   L  + ++G  P+ V                               +N LI+ L
Sbjct: 196 VDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAERFEPVVSVYNALINGL 255

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLP----------- 380
            K   Y   +++   ++E  + P+  ++ +L++ +  SG+    FSLL            
Sbjct: 256 CKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNI 315

Query: 381 ------------------------KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYN 416
                                   +++ G  ++ ++V YN L+  FC  G  ++AV ++ 
Sbjct: 316 HTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFL 375

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
            M + G +P+  ++  L+ G      ++ A+ ++  ++ +    N  V+T++V+ L    
Sbjct: 376 HMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHS 435

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM-KHIAVPPNAYTY 535
           +  +A  L      E     V ++   I+GL + GR + A  ++ QM +    PPN  TY
Sbjct: 436 KFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTY 495

Query: 536 RVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSA-----VNQL 590
             +L    K   I+    L +++    +E    T   L       H S +A       QL
Sbjct: 496 NELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTL------LHGSCNAGLPGIALQL 549

Query: 591 V-EMCNLGLIPDEMWRKLGLLS----DETMTPVSLFDGFVPCERR 630
           V +M   G  PDE+   + +L+     +    V + D  V C RR
Sbjct: 550 VGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQMLD-LVSCGRR 593


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 123/491 (25%), Positives = 217/491 (44%), Gaps = 46/491 (9%)

Query: 105 GIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVL 164
           G++  +   G      T+   +R           +E   EM   G  PN    + ++   
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195

Query: 165 FKIGR-VDLG---IKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV 220
            K GR  D+G   +++ ++   P+ + +   + +LCK+        V+ MMVR+G  PNV
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
             + +L+NC CK G + EA  +L  M   G +  V  +  LI G   +  +D A +L E+
Sbjct: 256 VTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEE 315

Query: 281 MV--QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
           MV  +N   PNVVT+ S+I+G  +      AF    M+E  G   +LV +N+LI  L ++
Sbjct: 316 MVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRV 375

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNAL 398
                A+++ D +  L L PDS+T                                Y+ L
Sbjct: 376 HKVRKAMELMDEMTSLGLEPDSFT--------------------------------YSIL 403

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           +  FCK    ++A  L +TM D+G  P+ + ++ LL  +C    ++ A N++  +  N P
Sbjct: 404 IKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFP 463

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
            ++   ++ ++    +AG    A +L +  + E    D V+Y++ I    + G  E A  
Sbjct: 464 -LDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANG 522

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
           +  QM      P+   +  ++  +  +  I  V  L++++I   I LD       +K I 
Sbjct: 523 VLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALD-------SKIIS 575

Query: 579 KFHSSSSAVNQ 589
              +S  A N+
Sbjct: 576 TLSTSLVASNE 586



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 105/490 (21%), Positives = 214/490 (43%), Gaps = 56/490 (11%)

Query: 153 NTFARNIVMDVLFKIGRVDLGIKVLKETQL-------PNFLSFNIALCNLCKLNDVSNVK 205
           +  + N V+  L + G  D    +L+   L       PN +S+ + +  LC         
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 206 DVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF 265
            ++  M   G   +V  +  L+   C    + +A +L+G M   G   +V  ++ L+ G+
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195

Query: 266 RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL 325
            +  R +  G ++ +M + G  P+VV YT LI    +      A   +DM+   G  P++
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255

Query: 326 VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC----LSGRFSLLPK 381
           V +NVLI+C+ K GS  +A+ V   + E  + PD  T+ +L+  +     +     LL +
Sbjct: 256 VTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEE 315

Query: 382 LVCGLE-VEADLVVYNALLSYFCKAGFPNQ------------------------------ 410
           +V G   V+ ++V +N+++   C  G   Q                              
Sbjct: 316 MVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRV 375

Query: 411 -----AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV- 464
                A++L + M   G  PD++++  L++G C   ++D A ++     M +  +   + 
Sbjct: 376 HKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLS--TMRDRGIEPELF 433

Query: 465 -HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM 523
            +  ++  + E G   +A  LF   +   +PLDVV+Y+  I G  + G  + A  L   +
Sbjct: 434 HYIPLLVAMCEQGMMERARNLFNE-MDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSI 492

Query: 524 KHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSS 583
               + P+A TY +++  F K  +++    +L+ +  +     +   + +   + + +S+
Sbjct: 493 VDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTAS----GFLPDVAVFDSLIQGYST 548

Query: 584 SSAVNQLVEM 593
              +N+++E+
Sbjct: 549 KGEINKVLEL 558



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 71/338 (21%), Positives = 138/338 (40%), Gaps = 39/338 (11%)

Query: 48  LAPHIV-HSTLLNCPSDLIALSFFIWCAKQ----RDYFH-DVQSFDHMISVVTRLTGRFE 101
           +AP +V ++TL+   SD++ +   +W  ++    ++    +V +F+ +I  +  + GR  
Sbjct: 286 VAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDI-GRMR 344

Query: 102 TVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVM 161
               +   +   GC++   T+ L +    R       +E  DEM   G  P++F      
Sbjct: 345 QAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSF------ 398

Query: 162 DVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
                                    +++I +   CK+  V   +D++  M  +G  P + 
Sbjct: 399 -------------------------TYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELF 433

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            +  LL   C+ G +  A  L   M      L V A++ +I G  +   L  A  L + +
Sbjct: 434 HYIPLLVAMCEQGMMERARNLFNEMDN-NFPLDVVAYSTMIHGACKAGDLKTAKELLKSI 492

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
           V  G +P+ VTY+ +I  F ++     A   L  + + G  PD+   + LI   S  G  
Sbjct: 493 VDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEI 552

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
           +  L++   ++   +  DS    +L +++  S     L
Sbjct: 553 NKVLELIREMITKNIALDSKIISTLSTSLVASNEGKAL 590



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 105/244 (43%), Gaps = 12/244 (4%)

Query: 368 STVCLSGRFSLLP-----KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTML--- 419
           +  CL+    LLP      L+  L    D V YN +L+  C+ G  ++A  L   M    
Sbjct: 48  AAACLNRHLRLLPLGEATSLLDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEP 107

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT--AIVDRLIEAGR 477
                P+  S+  L+R LC  R  D+A+ + +   M +  V A V T   ++  L +A  
Sbjct: 108 HPACRPNAVSYTVLMRALCADRLADQAVGLLRS--MRSAGVRADVVTYGTLIRGLCDAAE 165

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
             KA++L           +VV Y+  ++G  + GR E+   ++ +M    + P+   Y  
Sbjct: 166 VDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTG 225

Query: 538 MLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLG 597
           ++ S CK    K    ++  ++   +E +  T   L   + K  S   A+  L +M   G
Sbjct: 226 LIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKG 285

Query: 598 LIPD 601
           + PD
Sbjct: 286 VAPD 289


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 119/457 (26%), Positives = 208/457 (45%), Gaps = 46/457 (10%)

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGR-VDLG---IKVLKETQLPNFLSFNIALCN 194
           +E   EM   G  PN    + ++    K GR  D+G   +++ ++   P+ + +   + +
Sbjct: 170 VELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDS 229

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           LCK+        V+ MMVR+G  PNV  + +L+NC CK G + EA  +L  M   G +  
Sbjct: 230 LCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPD 289

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMV--QNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
           V  +  LI G   +  +D A +L E+MV  +N   PNVVT+ S+I+G  +      AF  
Sbjct: 290 VVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQV 349

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
             M+E  G   +LV +N+LI  L ++     A+++ D +  L L PDS+T          
Sbjct: 350 RAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFT---------- 399

Query: 373 SGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
                                 Y+ L+  FCK    ++A  L +TM D+G  P+ + ++ 
Sbjct: 400 ----------------------YSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIP 437

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           LL  +C    ++ A N++  +  N P ++   ++ ++    +AG    A +L +  + E 
Sbjct: 438 LLVAMCEQGMMERARNLFNEMDNNFP-LDVVAYSTMIHGACKAGDLKTAKELLKSIVDEG 496

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVK 552
              D V+Y++ I    + G  E A  +  QM      P+   +  ++  +  +  I  V 
Sbjct: 497 LTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVL 556

Query: 553 RLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQ 589
            L++++I   I LD       +K I    +S  A N+
Sbjct: 557 ELIREMITKNIALD-------SKIISTLSTSLVASNE 586



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 105/490 (21%), Positives = 214/490 (43%), Gaps = 56/490 (11%)

Query: 153 NTFARNIVMDVLFKIGRVDLGIKVLKETQL-------PNFLSFNIALCNLCKLNDVSNVK 205
           +  + N V+  L + G  D    +L+   L       PN +S+ + +  LC         
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 206 DVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF 265
            ++  M   G   +V  +  L+   C    + +A +L+G M   G   +V  ++ L+ G+
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195

Query: 266 RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL 325
            +  R +  G ++ +M + G  P+VV YT LI    +      A   +DM+   G  P++
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255

Query: 326 VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC----LSGRFSLLPK 381
           V +NVLI+C+ K GS  +A+ V   + E  + PD  T+ +L+  +     +     LL +
Sbjct: 256 VTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEE 315

Query: 382 LVCGLE-VEADLVVYNALLSYFCKAGFPNQ------------------------------ 410
           +V G   V+ ++V +N+++   C  G   Q                              
Sbjct: 316 MVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRV 375

Query: 411 -----AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV- 464
                A++L + M   G  PD++++  L++G C   ++D A ++     M +  +   + 
Sbjct: 376 HKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLS--TMRDRGIEPELF 433

Query: 465 -HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM 523
            +  ++  + E G   +A  LF   +   +PLDVV+Y+  I G  + G  + A  L   +
Sbjct: 434 HYIPLLVAMCEQGMMERARNLFNE-MDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSI 492

Query: 524 KHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSS 583
               + P+A TY +++  F K  +++    +L+ +  +     +   + +   + + +S+
Sbjct: 493 VDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTAS----GFLPDVAVFDSLIQGYST 548

Query: 584 SSAVNQLVEM 593
              +N+++E+
Sbjct: 549 KGEINKVLEL 558



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 70/332 (21%), Positives = 137/332 (41%), Gaps = 39/332 (11%)

Query: 48  LAPHIV-HSTLLNCPSDLIALSFFIWCAKQ----RDYFH-DVQSFDHMISVVTRLTGRFE 101
           +AP +V ++TL+   SD++ +   +W  ++    ++    +V +F+ +I  +  + GR  
Sbjct: 286 VAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDI-GRMR 344

Query: 102 TVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVM 161
               +   +   GC++   T+ L +    R       +E  DEM   G  P++F      
Sbjct: 345 QAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSF------ 398

Query: 162 DVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
                                    +++I +   CK+  V   +D++  M  +G  P + 
Sbjct: 399 -------------------------TYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELF 433

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            +  LL   C+ G +  A  L   M      L V A++ +I G  +   L  A  L + +
Sbjct: 434 HYIPLLVAMCEQGMMERARNLFNEMDN-NFPLDVVAYSTMIHGACKAGDLKTAKELLKSI 492

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
           V  G +P+ VTY+ +I  F ++     A   L  + + G  PD+   + LI   S  G  
Sbjct: 493 VDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEI 552

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           +  L++   ++   +  DS    +L +++  S
Sbjct: 553 NKVLELIREMITKNIALDSKIISTLSTSLVAS 584



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 105/244 (43%), Gaps = 12/244 (4%)

Query: 368 STVCLSGRFSLLP-----KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTML--- 419
           +  CL+    LLP      L+  L    D V YN +L+  C+ G  ++A  L   M    
Sbjct: 48  AAACLNRHLRLLPLGEATSLLDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEP 107

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT--AIVDRLIEAGR 477
                P+  S+  L+R LC  R  D+A+ + +   M +  V A V T   ++  L +A  
Sbjct: 108 HPACRPNAVSYTVLMRALCADRLADQAVGLLRS--MRSAGVRADVVTYGTLIRGLCDAAE 165

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
             KA++L           +VV Y+  ++G  + GR E+   ++ +M    + P+   Y  
Sbjct: 166 VDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTG 225

Query: 538 MLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLG 597
           ++ S CK    K    ++  ++   +E +  T   L   + K  S   A+  L +M   G
Sbjct: 226 LIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKG 285

Query: 598 LIPD 601
           + PD
Sbjct: 286 VAPD 289


>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 104/443 (23%), Positives = 209/443 (47%), Gaps = 9/443 (2%)

Query: 126 LRIYWRGEMYGMVLEAF---DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV---LKE 179
           L+I+ R    G  +E+    + M R G+ P+      ++   F +  V   ++V   L++
Sbjct: 89  LKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEK 148

Query: 180 TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEA 239
              P+  ++N  +   CK+N + +   V+  M  K F P+   + I++   C  G++  A
Sbjct: 149 FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 208

Query: 240 YQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG 299
            ++L  +++     +V  +T+LI+       +D A  L ++M+  G  P++ TY ++I+G
Sbjct: 209 LKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRG 268

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
             +  M   AF  +  LE +G  PD++ +N+L+  L   G +++   +   +   K  P+
Sbjct: 269 MCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 328

Query: 360 SYTFCSLLSTVCLSGRFSL---LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYN 416
             T+  L++T+C  G+      L KL+    +  D   Y+ L++ FC+ G  + A++   
Sbjct: 329 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 388

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
           TM+  G  PD  ++  +L  LC   K D+A+ ++  +     + N+  +  +   L  +G
Sbjct: 389 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 448

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
              +A+ +    +      D ++Y   I  L   G  ++A+ L   M+     P+  TY 
Sbjct: 449 DKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYN 508

Query: 537 VMLLSFCKERNIKMVKRLLQDVI 559
           ++LL FCK   I+    +L  ++
Sbjct: 509 IVLLGFCKAHRIEDAIDVLDSMV 531



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/368 (25%), Positives = 177/368 (48%), Gaps = 9/368 (2%)

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           MVRKG+ P+V +   L+  F  +  + +A +++ ++   G    V A+  LI+GF ++ R
Sbjct: 111 MVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFGQP-DVFAYNALINGFCKMNR 169

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           +D A  + ++M     SP+ VTY  +I          +A   LD L S+   P ++ + +
Sbjct: 170 IDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTI 229

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV-- 388
           LI+     G  D+AL + D +L   L PD +T+ +++  +C  G      +++  LE+  
Sbjct: 230 LIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKG 289

Query: 389 -EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
            E D++ YN LL      G   +  KL   M  +   P+  ++  L+  LC   KI+EA+
Sbjct: 290 CEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAM 349

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
           N+ + +       +A+ +  ++      GR   AI+     I +    D+V+Y   +  L
Sbjct: 350 NLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATL 409

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC----KERNIKMVKRLLQDVIDARI 563
            + G+ ++A  ++ ++  +   PN+ +Y  M  +      K R + M+  ++ + ID   
Sbjct: 410 CKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPD- 468

Query: 564 ELDYHTSI 571
           E+ Y++ I
Sbjct: 469 EITYNSMI 476



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 177/362 (48%), Gaps = 10/362 (2%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFL 186
           RG++  + L+  D++      P      I+++     G VD  +K+L E       P+  
Sbjct: 202 RGKL-DLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMF 260

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           ++N  +  +CK   V    ++I  +  KG  P+V  + ILL      G+  E  +L+  M
Sbjct: 261 TYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKM 320

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
            +     +V  +++LI    R  +++ A  L + M + G +P+  +Y  LI  F      
Sbjct: 321 FSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRL 380

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
            +A  FL+ + S+G  PD+V +N ++  L K G  D AL+++  L E+   P+S ++ ++
Sbjct: 381 DVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTM 440

Query: 367 LSTVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
            S +  SG       ++ ++V    ++ D + YN+++S  C+ G  ++A +L   M    
Sbjct: 441 FSALWSSGDKIRALHMILEMVSN-GIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCE 499

Query: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI 482
           F P   ++  +L G C A +I++AI+V   +V N    N   +T +++ +  AG   +A+
Sbjct: 500 FHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAM 559

Query: 483 QL 484
           +L
Sbjct: 560 EL 561



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 92/366 (25%), Positives = 171/366 (46%), Gaps = 39/366 (10%)

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
           +L E MV+ G +P+V+  T LIKGF   +    A   +++LE  G  PD+  +N LI+  
Sbjct: 106 HLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFGQ-PDVFAYNALINGF 164

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADL 392
            KM   DDA  V D +      PD+ T+  ++ ++C  G+  L  K++  L     +  +
Sbjct: 165 CKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTV 224

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           + Y  L+      G  ++A+KL + ML +G  PD +++  ++RG+C    +D A  + + 
Sbjct: 225 ITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRN 284

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           + +     +   +  ++  L+  G+  +  +L  +   EK   +VV+Y++ I  L   G+
Sbjct: 285 LELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGK 344

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI------------- 559
            EEA  L   MK   + P+AY+Y  ++ +FC+E  + +    L+ +I             
Sbjct: 345 IEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNT 404

Query: 560 -----------DARIEL---------DYHTSIRLTKFIFKFHSSSS--AVNQLVEMCNLG 597
                      D  +E+           ++S   T F   + S     A++ ++EM + G
Sbjct: 405 VLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNG 464

Query: 598 LIPDEM 603
           + PDE+
Sbjct: 465 IDPDEI 470



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 97/391 (24%), Positives = 176/391 (45%), Gaps = 10/391 (2%)

Query: 75  KQRDYFHDVQSFDHMI-SVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGE 133
           + +D+  D  +++ MI S+ +R  G+ +    ++ +L    C     T+ + +       
Sbjct: 181 RSKDFSPDTVTYNIMIGSLCSR--GKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEG 238

Query: 134 MYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFN 189
                L+  DEM   G  P+ F  N ++  + K G VD   ++++  +L    P+ +S+N
Sbjct: 239 GVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYN 298

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
           I L  L         + ++  M  +   PNV  + IL+   C+ G+I EA  LL LM   
Sbjct: 299 ILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEK 358

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           G +    ++  LI  F R  RLD+A    E M+ +GC P++V Y +++    +      A
Sbjct: 359 GLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQA 418

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
                 L   G +P+   +N +   L   G    AL +   ++   + PD  T+ S++S 
Sbjct: 419 LEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISC 478

Query: 370 VCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
           +C  G      +L+  +   E    +V YN +L  FCKA     A+ + ++M+  G  P+
Sbjct: 479 LCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPN 538

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
             ++  L+ G+  A    EA+ +   +V  N
Sbjct: 539 ETTYTVLIEGIGFAGYRAEAMELANDLVRIN 569



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/307 (22%), Positives = 134/307 (43%), Gaps = 47/307 (15%)

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL--LPKLVCGLEV-----E 389
           + G+Y ++L + + ++     PD      +L T  + G F+L  +PK V  +E+     +
Sbjct: 97  RSGNYIESLHLLETMVRKGYNPDV-----ILCTKLIKGFFTLRNVPKAVRVMEILEKFGQ 151

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            D+  YNAL++ FCK    + A ++ + M  K F+PD  ++  ++  LC   K+D A+ V
Sbjct: 152 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 211

Query: 450 YQGIVMNN--PAV---------------------------------NAHVHTAIVDRLIE 474
              ++ +N  P V                                 +   +  I+  + +
Sbjct: 212 LDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCK 271

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
            G   +A ++ R   ++    DV+SY + +R LL  G+ EE   L ++M      PN  T
Sbjct: 272 EGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 331

Query: 535 YRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMC 594
           Y +++ + C++  I+    LL+ + +  +  D ++   L     +      A+  L  M 
Sbjct: 332 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 391

Query: 595 NLGLIPD 601
           + G +PD
Sbjct: 392 SDGCLPD 398


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 117/476 (24%), Positives = 219/476 (46%), Gaps = 9/476 (1%)

Query: 135 YGMVLE---AFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG----IKVLKETQLPNFLS 187
           +G+V E    + EM      PN +  N +++   K+G V+       K+++    P+F +
Sbjct: 196 FGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFT 255

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           +   +   C+  D+ +   V   M  KG   N   +  L++  C   RI EA  L   M 
Sbjct: 256 YTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMK 315

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
                 +V  +TVLI       R   A  L ++M + G  PN+ TYT LI        F 
Sbjct: 316 DDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFE 375

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A   L  +  +G  P+++ +N LI+   K G  +DA+DV + +   KL P++ T+  L+
Sbjct: 376 KARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELI 435

Query: 368 STVCLSGRFSLLPKLVCGLE--VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
              C S     +  L   LE  V  D+V YN+L+   C++G  + A +L + M D+G  P
Sbjct: 436 KGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVP 495

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           D +++  ++  LC +++++EA +++  +       N  ++TA++D   +AG+  +A  + 
Sbjct: 496 DQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLML 555

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
            + + +    + +++   I GL   G+ +EA +L  +M  I + P   T  +++    K+
Sbjct: 556 EKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKD 615

Query: 546 RNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            +        Q ++ +  + D HT     +   +      A + + +M   G+ PD
Sbjct: 616 GDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPD 671



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 114/461 (24%), Positives = 209/461 (45%), Gaps = 8/461 (1%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP----NFLSFNIALCNLCKLNDVSNV 204
           G  P+ F    ++    +   +D   KV  E  L     N +++   +  LC    +   
Sbjct: 248 GLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEA 307

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
            D+   M     +P VR + +L+   C   R +EA  L+  M   G   +++ +TVLID 
Sbjct: 308 MDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDS 367

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
                + + A  L  +M++ G  PNV+TY +LI G+ +  M   A   ++++ES   +P+
Sbjct: 368 LCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPN 427

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVC 384
              +N LI    K   +  A+ V + +LE K++PD  T+ SL+   C SG F    +L+ 
Sbjct: 428 TRTYNELIKGYCKSNVHK-AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLS 486

Query: 385 GLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
            +       D   Y +++   CK+    +A  L++++  KG  P+   +  L+ G C A 
Sbjct: 487 LMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAG 546

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYT 501
           K+DEA  + + ++  N   N+    A++  L   G+  +A  L  + +       V + T
Sbjct: 547 KVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDT 606

Query: 502 VAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
           + I  LL+ G  + AY  + QM      P+A+TY   + ++C+E  +   + ++  + + 
Sbjct: 607 ILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMREN 666

Query: 562 RIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
            +  D  T   L K       ++ A + L  M + G  P +
Sbjct: 667 GVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQ 707



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 111/461 (24%), Positives = 201/461 (43%), Gaps = 31/461 (6%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
           +R    DV +++ +I    R +G F++   ++  +   G V    T+   +    + +  
Sbjct: 455 ERKVLPDVVTYNSLIDGQCR-SGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRV 513

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG----IKVLKETQLPNFLSFNIA 191
               + FD + + G  PN      ++D   K G+VD       K+L +  LPN L+FN  
Sbjct: 514 EEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNAL 573

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           +  LC    +     +   MV+ G  P V    IL++   K G    AY     M++ GT
Sbjct: 574 IHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGT 633

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
               + +T  I  + R  RL  A  +  KM +NG SP++ TY+SLIKG+ +    + AF 
Sbjct: 634 KPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFD 693

Query: 312 FLDMLESEGHAP------DLVFHNVLID------------CLSKMGSYDDALDVYDGLLE 353
            L  +   G  P       L+ H + +              +S M  +D  +++ + ++E
Sbjct: 694 VLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVE 753

Query: 354 LKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE----VEADLVVYNALLSYFCKAGFPN 409
             + P++ ++  L+  +C  G   +  K+   ++    +    +V+NALLS  CK    N
Sbjct: 754 HSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHN 813

Query: 410 QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
           +A K+ + M+  G  P   S   L+ GL    + +   +V+Q ++      +      I+
Sbjct: 814 EAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIII 873

Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
           D + + G      +LF   ++EK      S T ++  L+EG
Sbjct: 874 DGVGKQGLVEAFYELFN--VMEKNGCKFSSQTYSL--LIEG 910



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 92/421 (21%), Positives = 173/421 (41%), Gaps = 26/421 (6%)

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLND 200
           M   G  P+ +    ++D L K  RV+    +    +     PN + +   +   CK   
Sbjct: 488 MNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGK 547

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
           V     ++  M+ K   PN   F  L++  C  G++ EA  L   M+ +G   +V+  T+
Sbjct: 548 VDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTI 607

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           LI    +    D A   +++M+ +G  P+  TYT+ I+ +        A   +  +   G
Sbjct: 608 LIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENG 667

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC--LSGRFSL 378
            +PDL  ++ LI     +G  + A DV   + +    P  +TF SL+  +     G+   
Sbjct: 668 VSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKG 727

Query: 379 LPKLVCGLE--VEADLVV-----------------YNALLSYFCKAGFPNQAVKLYNTML 419
               +C +   +E D VV                 Y  L+   C+ G    A K+++ M 
Sbjct: 728 SEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQ 787

Query: 420 -DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
            ++G +P    F  LL   C  +K +EA  V   ++             ++  L + G  
Sbjct: 788 RNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEK 847

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            +   +F+  +   Y  D +++ + I G+ + G  E  Y L++ M+      ++ TY ++
Sbjct: 848 ERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLL 907

Query: 539 L 539
           +
Sbjct: 908 I 908



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/339 (22%), Positives = 144/339 (42%), Gaps = 39/339 (11%)

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTY--------------- 293
           L   L +  +  L++   R   +D    ++ +M+++   PN+ TY               
Sbjct: 177 LKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEE 236

Query: 294 --------------------TSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
                               TSLI G+ + K    AF   + +  +G   + V +  LI 
Sbjct: 237 ANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIH 296

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEA 390
            L      D+A+D++  + + +  P   T+  L+ ++C S R S    LV  +E   ++ 
Sbjct: 297 GLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKP 356

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           ++  Y  L+   C      +A +L   ML+KG  P+  ++  L+ G C    I++A++V 
Sbjct: 357 NIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVV 416

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
           + +     + N   +  ++    ++   HKA+ +  + +  K   DVV+Y   I G    
Sbjct: 417 ELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRS 475

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
           G  + AY L S M    + P+ +TY  M+ S CK + ++
Sbjct: 476 GNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVE 514



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 55/230 (23%), Positives = 101/230 (43%), Gaps = 14/230 (6%)

Query: 375 RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
           RF L  KL+ G         YN LL+   + G  ++  ++Y  ML+    P+ Y++  ++
Sbjct: 174 RFELKYKLIIG--------CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMV 225

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            G C    ++EA      IV      +   +T+++    +      A ++F    ++   
Sbjct: 226 NGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCR 285

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
            + V+YT  I GL    R +EA  L+ +MK     P   TY V++ S C          L
Sbjct: 286 RNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNL 345

Query: 555 LQDVIDARIELDYHTSIRLTKFI---FKFHSSSSAVNQLVEMCNLGLIPD 601
           ++++ +  I+ + HT   L   +    KF  +   + Q++E    GL+P+
Sbjct: 346 VKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEK---GLMPN 392


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 143/610 (23%), Positives = 261/610 (42%), Gaps = 45/610 (7%)

Query: 45  PIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSF----------------DH 88
           P + A H+     ++  ++ + + FF W +K+  Y H++  F                DH
Sbjct: 71  PQLKAHHVAEIVAVHKDTESV-IQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADH 129

Query: 89  MISVVTRLTGRFETVRGI---VGELARVG---CVIKAQTFLLFLRIYWRGEMYGMVLEAF 142
           +  ++ +     E +R +   + E++ +G    +    T L+ L  +   EM       +
Sbjct: 130 IRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKF---EMVEGARNLY 186

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE----TQLPNFLSFNIALCNLCKL 198
            +M   G  P+    N ++++L K G+V     +L +       P+  ++   +   C+ 
Sbjct: 187 KQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRN 246

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
            ++     V   MV++G  PN   +  L+N  C  GR+ EA  +L  MI  G   +V  +
Sbjct: 247 RNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTY 306

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
           T+ I     +   + A  L  +M + GC PNV TYT+LI G        +A      +  
Sbjct: 307 TLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLK 366

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG---R 375
           EG  P+ V +N LI+ L   G +  AL ++  +     + ++ T+  ++  +CL G   +
Sbjct: 367 EGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEK 426

Query: 376 FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
             +L + +  +     +V YN L++ +   G  N A +L + M + G  PD +++  L+ 
Sbjct: 427 AMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVS 486

Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
           G     K++ A   +Q +V      N   +TA++D   + G+   A+ L +R        
Sbjct: 487 GFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNP 546

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
           +V SY   I GL +  R  EA  +  +M    + PN  TY  ++   C+    +   ++ 
Sbjct: 547 NVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIF 606

Query: 556 QDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETM 615
            D+   +   + +T   L   + +   +  A   L EM   GL PDE            +
Sbjct: 607 HDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDE------------V 654

Query: 616 TPVSLFDGFV 625
           T  SL DGFV
Sbjct: 655 TFTSLIDGFV 664



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 164/348 (47%), Gaps = 7/348 (2%)

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           +V  + + GC    QT+   +    R     + +  + +M + G  PNT   N +++ L 
Sbjct: 325 LVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELC 384

Query: 166 KIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
             GR    +K+         L N  ++N  +  LC   D+     +   M++ G  P V 
Sbjct: 385 VGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVV 444

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            +  L+N +   G +  A +LL LM   G       +  L+ GF +  +L+ A + +++M
Sbjct: 445 TYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEM 504

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
           V+ G +PN V+YT+LI G  +     IA S L  +E  G  P++  +N +I+ LSK   +
Sbjct: 505 VECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRF 564

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE---ADLVVYNAL 398
            +A  + D ++E  L+P+  T+ +L+  +C +GR     K+   +E      +L  Y++L
Sbjct: 565 SEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSL 624

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
           +   C+ G  ++A  L   M  KG  PD  +F  L+ G     +ID A
Sbjct: 625 IYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHA 672



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 120/545 (22%), Positives = 236/545 (43%), Gaps = 60/545 (11%)

Query: 56  TLLNCPSDLIALSFFIWCAKQRDYFHD---------VQSFDHMISVVTRLTGRFETVRGI 106
           +L +C + LI L+ F      R+ +           + +F+ +I+++++  G+      I
Sbjct: 162 SLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSK-KGKVREAELI 220

Query: 107 VGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK 166
           + ++ +        T+   +  + R     +    FD M + G  PN+   + +++ L  
Sbjct: 221 LSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCN 280

Query: 167 IGRVDLGIKVLKE-----------------TQL----------------------PNFLS 187
            GRVD  + +L+E                 T L                      PN  +
Sbjct: 281 EGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQT 340

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           +   +  L +L  +     +   M+++G  PN   +  L+N  C  GR + A ++   M 
Sbjct: 341 YTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWME 400

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
             G+  +   +  +I G      ++ A  L+EKM++ G  P VVTY +LI G++     +
Sbjct: 401 GHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVN 460

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A   LD+++  G  PD   +N L+   SK G  + A   +  ++E  L P+  ++ +L+
Sbjct: 461 NAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALI 520

Query: 368 STVCLSGR----FSLLPKLV---CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
                 G+     SLL ++    C   VE+    YNA+++   K    ++A K+ + M++
Sbjct: 521 DGHSKDGKVDIALSLLKRMEEMGCNPNVES----YNAVINGLSKENRFSEAEKICDKMVE 576

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
           +G  P+  ++  L+ GLC   +   A  ++  +       N + +++++  L + G+  +
Sbjct: 577 QGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADE 636

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
           A  L +    +    D V++T  I G +  GR + A++L  +M  +   PN  TY V+L 
Sbjct: 637 AEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLK 696

Query: 541 SFCKE 545
              KE
Sbjct: 697 GLQKE 701



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 90/216 (41%), Gaps = 45/216 (20%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
           F EM   G  PN  +   ++D   K G+VD+ + +LK  +     PN  S+N  +  L K
Sbjct: 501 FQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSK 560

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIA-------------------- 237
            N  S  + +   MV +G  PNV  +  L++  C+ GR                      
Sbjct: 561 ENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYT 620

Query: 238 ---------------EAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
                          EA  LL  M   G +     +T LIDGF  L R+D A  L  +MV
Sbjct: 621 YSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMV 680

Query: 283 QNGCSPNVVTYTSLIKG------FMEAKMFSIAFSF 312
             GC PN  TY+ L+KG       +E K+F +  ++
Sbjct: 681 DMGCKPNYRTYSVLLKGLQKECLLLEEKIFPLVDNY 716


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 118/492 (23%), Positives = 237/492 (48%), Gaps = 49/492 (9%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLR-IYWRGEM 134
           + D+F    +F+ +I+  ++L G       I  ++ + G    A TF   ++ +  +G +
Sbjct: 93  ESDFF----TFNILINCFSQL-GLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHI 147

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNI 190
           +   L   D++   GF  +  +   +++ L K+GR+   +++LK        PN + +N+
Sbjct: 148 H-QALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNM 206

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            + N+CK   V++  D+   MV K   P+V  +  L++ F  + ++  A  L   M    
Sbjct: 207 IIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKEN 266

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
            + +V  + +L+DGF +  +++ A  +   M+++   P+VVTY SL+ G+      + A 
Sbjct: 267 INPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAK 326

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
              D + S G   ++  +  +++   K+   D+A+++++ +   K++P+  T+ SL+  +
Sbjct: 327 DIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGL 386

Query: 371 CLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           C  GR     KLV  +       ++V Y+++L   CK    ++A+ L   + D+G  PD 
Sbjct: 387 CKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDM 446

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
           Y++  L++GLC                                   ++GR   A  +F  
Sbjct: 447 YTYTILIKGLC-----------------------------------QSGRLEDAQNVFED 471

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN 547
            +V+ Y LDV +YTV I+G  + G  ++A  L S+M+     PNA TY +++LS  ++  
Sbjct: 472 LLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDE 531

Query: 548 IKMVKRLLQDVI 559
               ++LL+++I
Sbjct: 532 NDTAEKLLREMI 543



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 116/512 (22%), Positives = 243/512 (47%), Gaps = 18/512 (3%)

Query: 124 LFLRIYWRGEMYGMVLEAFDEMG-RFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL 182
           LF +++ + +    ++ +F+ +      TP TF  N ++  L K       + + ++ +L
Sbjct: 30  LFSQLHHKQDEENNLISSFNHLLLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMEL 89

Query: 183 ----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAE 238
                +F +FNI +    +L   S    +   +++KG++P    F  L+   C  G I +
Sbjct: 90  NGIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQ 149

Query: 239 AYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIK 298
           A      ++  G  L   ++  LI+G  ++ R+  A  L +++      PN V Y  +I 
Sbjct: 150 ALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIID 209

Query: 299 GFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP 358
              +AK+ + AF     + ++   PD+  +N LI   S +   + A+D+++ + +  + P
Sbjct: 210 NMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINP 269

Query: 359 DSYTFCSLLSTVCLSGRFSLLPKLVCGL----EVEADLVVYNALLSYFCKAGFPNQAVKL 414
           + YTF  L+   C  G+ +   K+V  +    +++ D+V YN+L+  +C     N+A  +
Sbjct: 270 NVYTFNILVDGFCKEGKVND-AKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDI 328

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
           +++M   G   +   +  ++ G C  + +DEAIN+++ +       N   +++++D L +
Sbjct: 329 FDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCK 388

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
            GR   A++L         P ++V+Y+  +  L +    ++A  L + +K   + P+ YT
Sbjct: 389 LGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYT 448

Query: 535 YRVMLLSFCKERNIKMVKRLLQDVIDARIELD-YHTSIRLTKFIFK-FHSSSSAVNQLVE 592
           Y +++   C+   ++  + + +D++     LD Y  ++ +  F  K F   + A+  L +
Sbjct: 449 YTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALAL--LSK 506

Query: 593 MCNLGLIPDEMWRKLGLLS----DETMTPVSL 620
           M + G IP+    +L +LS    DE  T   L
Sbjct: 507 MEDNGCIPNAKTYELVILSLFEKDENDTAEKL 538



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/402 (22%), Positives = 179/402 (44%), Gaps = 40/402 (9%)

Query: 93  VTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTP 152
           V R+T   + ++ + G+L +   V+    + + +    + ++     + + +M      P
Sbjct: 179 VGRITAALQLLKRVDGKLVQPNAVM----YNMIIDNMCKAKLVNDAFDLYSQMVAKRICP 234

Query: 153 NTFARNIVMDVLFKIGR----VDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVI 208
           + F  N ++     + +    +DL  K+ KE   PN  +FNI +   CK   V++ K V+
Sbjct: 235 DVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVL 294

Query: 209 GMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRL 268
            +M++    P+V  +  L++ +C + ++ +A  +   M + G   +V  +T +++GF ++
Sbjct: 295 AIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKI 354

Query: 269 RRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH 328
           + +D A  L+E+M      PNVVTY+SLI G  +      A   +D +   G  P++V +
Sbjct: 355 KMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTY 414

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV 388
           + ++D L K    D A+ +   L +  + PD YT                          
Sbjct: 415 SSILDALCKNHHVDKAIALLTNLKDQGIRPDMYT-------------------------- 448

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
                 Y  L+   C++G    A  ++  +L KG+  D Y++  +++G C     D+A+ 
Sbjct: 449 ------YTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALA 502

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
           +   +  N    NA  +  ++  L E      A +L R  IV
Sbjct: 503 LLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIV 544



 Score = 47.4 bits (111), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 4/151 (2%)

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCN 194
           L+  DEM   G  PN    + ++D L K   VD  I +L   +     P+  ++ I +  
Sbjct: 396 LKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKG 455

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           LC+   + + ++V   ++ KG+  +V  + +++  FC  G   +A  LL  M   G   +
Sbjct: 456 LCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPN 515

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
              + ++I         D A  L  +M+  G
Sbjct: 516 AKTYELVILSLFEKDENDTAEKLLREMIVRG 546


>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Glycine max]
          Length = 556

 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 114/437 (26%), Positives = 209/437 (47%), Gaps = 45/437 (10%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFL 186
           RGE+    L+  D++    F  +  +   +++ L KIG     I++++  +     P+ +
Sbjct: 152 RGEV-KKALKFHDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVV 210

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
            +NI + +LCK   V    ++   M  K  YPNV  +  L+  FC MG + EA  LL  M
Sbjct: 211 MYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEM 270

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
                +  V  +++LID   +  ++  A  +   M++    P+VVTY SL+ G+      
Sbjct: 271 KLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEV 330

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
             A    + +   G  P +  + ++ID L K    D+A+ +++ +    ++P++ TF SL
Sbjct: 331 KHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSL 390

Query: 367 LSTVCLSGRFSLLPKLVCGLEVE---ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           +  +C SGR + +  LV  +      AD++ Y++L+   CK    +QA+ L+  M+ +  
Sbjct: 391 IDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEI 450

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
            PD Y++  L+ GLC                                   + GR   A +
Sbjct: 451 QPDMYTYTILIDGLC-----------------------------------KGGRLKIAQE 475

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS-F 542
           +F+  +++ Y LD+ +YTV I G  + G  +EA  L S+M+     PNA T+ +++ + F
Sbjct: 476 VFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALF 535

Query: 543 CKERNIKMVKRLLQDVI 559
            K+ N K  ++LL+++I
Sbjct: 536 EKDENDK-AEKLLREMI 551



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/470 (22%), Positives = 210/470 (44%), Gaps = 9/470 (1%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
           F+ M      P TF  N ++  L K+ R    I + K         + ++ NI +   C 
Sbjct: 57  FNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILINCFCH 116

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
           L  ++    V+  ++++G++P+V     L+   C  G + +A +    ++ L   L   +
Sbjct: 117 LGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRIS 176

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  LI+G  ++     A  L   + +    P+VV Y  +I    + K+   A +    + 
Sbjct: 177 YGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMN 236

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
           ++   P++V +  LI     MG   +A+ + + +    + PD YTF  L+  +   G+  
Sbjct: 237 AKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMK 296

Query: 378 LLPKLVCGLEVEA----DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
              K+V  + ++A    D+V YN+L+  +        A  ++N+M   G TP   S+  +
Sbjct: 297 A-AKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIM 355

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           + GLC  + +DEAI++++ +   N   N     +++D L ++GR      L  +      
Sbjct: 356 IDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQ 415

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
             DV++Y+  I  L +    ++A  L+ +M    + P+ YTY +++   CK   +K+ + 
Sbjct: 416 LADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQE 475

Query: 554 LLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           + Q ++     LD  T   +     K      A+  L +M + G IP+ +
Sbjct: 476 VFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAI 525



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/229 (20%), Positives = 89/229 (38%), Gaps = 39/229 (17%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           L    +  + +   +A+ G     Q++ + +    + +M    +  F+EM      PNT 
Sbjct: 326 LVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTI 385

Query: 156 ARNIVMDVLFKIGRV----DLGIKVLKETQL----------------------------- 182
             N ++D L K GR+    DL  K+   +QL                             
Sbjct: 386 TFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKM 445

Query: 183 ------PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
                 P+  ++ I +  LCK   +   ++V   ++ KG++ ++R + ++++ FCK G  
Sbjct: 446 ITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLF 505

Query: 237 AEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
            EA  LL  M   G   +   + ++I         D A  L  +M+  G
Sbjct: 506 DEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLREMIARG 554


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 118/492 (23%), Positives = 226/492 (45%), Gaps = 17/492 (3%)

Query: 122 FLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV----L 177
           F L +R Y +        EAF  + + GF  +  A N ++  + K+G VDL  KV    +
Sbjct: 157 FDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFV 216

Query: 178 KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIA 237
           K   + N  + NI +  LCK   + NV   +  M  KG Y ++  +  L+N +C+ G ++
Sbjct: 217 KSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVS 276

Query: 238 EAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS-L 296
           EA+ L+  M   G    +  +  LI+G  +    + A  + ++M+  G  PN  T+   L
Sbjct: 277 EAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPML 336

Query: 297 IKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
           ++   +  ++     F +ML+  G  PDL+  + ++   S+ G    AL  ++ +  + L
Sbjct: 337 VESCRKEDVWEAERVFNEMLQ-RGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGL 395

Query: 357 VPDSYTFCSLLSTVC----LSGRFSLLPKLV---CGLEVEADLVVYNALLSYFCKAGFPN 409
           VPD+  +  L++  C    +SG   +  ++V   C +    D+V YN LL+  C+    +
Sbjct: 396 VPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVM----DVVTYNTLLNGLCRGKMLD 451

Query: 410 QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
            A +L+  M+++G  PD Y+   L+ G C    + +A+++++ + + +   +   +  ++
Sbjct: 452 DADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLM 511

Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
           D   + G   KA +L+   I  +     +S+++ I G    G   EA+ L+ +MK   + 
Sbjct: 512 DGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIK 571

Query: 530 PNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQ 589
           P   T   ++  + +  N+      L  +I   +  D  T   L     K  +   A   
Sbjct: 572 PTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFL 631

Query: 590 LVEMCNLGLIPD 601
           +  M   GL+P+
Sbjct: 632 INNMEERGLLPN 643



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 128/531 (24%), Positives = 216/531 (40%), Gaps = 49/531 (9%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           +V + + M++ + +  G+ + V   + E+   G      T+   +  Y R    G+V EA
Sbjct: 223 NVYTLNIMVNALCK-DGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCR---RGLVSEA 278

Query: 142 F---DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCN 194
           F   D M   G  P  F  N +++ L K G  +   +VL E       PN  +FN  L  
Sbjct: 279 FGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVE 338

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
            C+  DV   + V   M+++G  P++  F  ++  F + G +  A      M  +G    
Sbjct: 339 SCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPD 398

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
              +T+LI+G+ R   +  A  +  +MV+ GC  +VVTY +L+ G               
Sbjct: 399 TVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGL-------------- 444

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
                              C  KM   DDA +++  ++E  + PD YT  +L+   C  G
Sbjct: 445 -------------------CRGKM--LDDADELFKEMVERGVFPDFYTLTTLIHGYCKDG 483

Query: 375 RFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
             +    L   +    ++ D+V YN L+  FCK G   +A +L+  M+ +   P   SF 
Sbjct: 484 NMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFS 543

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            L+ G C    + EA  ++  +              I+   + AG   KA       I E
Sbjct: 544 ILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISE 603

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
             P D ++Y   I   ++    + A+ L + M+   + PN  TY  +L  F +   ++  
Sbjct: 604 GVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEA 663

Query: 552 KRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
           + +L  +ID  I  D  T   L        +   A     EM   G +PD+
Sbjct: 664 EMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPDD 714



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/380 (24%), Positives = 168/380 (44%), Gaps = 37/380 (9%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
           QR    D+ SF  ++ V +R  G          ++  VG V     + + +  Y R +  
Sbjct: 357 QRGVVPDLISFSSIVGVFSR-NGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDV 415

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIA 191
              L+  +EM   G   +    N +++ L +   +D   ++ KE       P+F +    
Sbjct: 416 SGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTL 475

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           +   CK  +++    +   M  +   P+V  +  L++ FCK+G + +A +L   MI+   
Sbjct: 476 IHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREI 535

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
             S  ++++LI+GF  L  +  A  LW++M + G  P +VT  ++IKG++ A   S A  
Sbjct: 536 FPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKAND 595

Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
           FL+ + SEG  PD + +N LI+   K  ++D A  + + + E  L+P             
Sbjct: 596 FLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLP------------- 642

Query: 372 LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
                              +LV YNA+L  F + G   +A  + + M+DKG  PD  ++ 
Sbjct: 643 -------------------NLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYT 683

Query: 432 GLLRGLCGARKIDEAINVYQ 451
            L+ G      + EA  V+ 
Sbjct: 684 SLINGYVSKDNMKEAFRVHD 703



 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 37/169 (21%), Positives = 76/169 (44%), Gaps = 2/169 (1%)

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
           +VV++ L+  + +A    +  + +  +  +GF     +   LL  +     +D A  VY+
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK-YPLDVVSYTVAIRGLLEG 510
             V +   VN +    +V+ L + G+    + ++   + EK    D+V+Y   +      
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKLDN-VGVYLSEMEEKGVYADLVTYNTLVNAYCRR 272

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           G   EA+ L   M    + P  +TY  ++   CKE + +  KR+L +++
Sbjct: 273 GLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEML 321


>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
          Length = 703

 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 119/476 (25%), Positives = 217/476 (45%), Gaps = 17/476 (3%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE-----TQLPNFLSFNIAL 192
            L+  DEM R    P+    N ++   FK G  +  ++V  +        PN  ++N+ L
Sbjct: 212 ALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVML 271

Query: 193 CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
             LCK      V +V   MV     P+V  + IL++  C+ G +  A ++   +I  G  
Sbjct: 272 DGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLV 331

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
           +    +  L+ GF +  R+  A   W+     G   N+ TY  +IKG  ++ M   A   
Sbjct: 332 IDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIEL 390

Query: 313 LDMLESE-GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
            D+LE +    PD V    LI  L + G  + A  +++         D +++ S+++ +C
Sbjct: 391 WDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLC 450

Query: 372 LSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
             GR     K+   ++ +    +  +YNAL+S FC+    + AV++Y+ M D G +P   
Sbjct: 451 NVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVI 510

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
           ++  L+ GLC A K  EA +V + +V N    +   + +++  L    +   A+ ++++ 
Sbjct: 511 TYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQI 570

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIA-VPPNAYTYRVMLLSFCKERN 547
           + +   +DV+ + + I GL   G+ +EA  ++S MK     PPN  TY  ++    +   
Sbjct: 571 LYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGY 630

Query: 548 IKMVKRLLQDVIDARIELD---YHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           I     L   + +  +E D   Y+T I+      + H     +  L E+ + G+IP
Sbjct: 631 IDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIH---EGIQLLDEVLSRGIIP 683



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 100/446 (22%), Positives = 199/446 (44%), Gaps = 45/446 (10%)

Query: 149 GFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNV 204
           G  PN    N+++D L K GR     ++  +++     P+ +++ I +  LC+  DV   
Sbjct: 259 GARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGA 318

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
             V   +++ G   +  M+  L+  FC+ GR+ EA++        G   ++  + ++I G
Sbjct: 319 ARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKG 377

Query: 265 FRRLRRLDMAGYLWEKMVQN-GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP 323
                 +D A  LW+ + ++  C P+ VT+ +LI G  +    + AF+  +     G   
Sbjct: 378 LFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQL 437

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV 383
           D+  ++ +I+ L  +G   DA+ VY+ + +    P+S+ + +L+S  C   R S   ++ 
Sbjct: 438 DVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIY 497

Query: 384 CGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
             +        ++ YN L+   CKA    +A  +   M++ GFTPD  ++  L+RGL   
Sbjct: 498 SKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSD 557

Query: 441 RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK-------- 492
           +KID+A+++++ I+     V+  +H  ++  L  AG+  +A+ +F     +K        
Sbjct: 558 KKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVT 617

Query: 493 ----------------------------YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
                                          D++SY   I+GL    R  E   L  ++ 
Sbjct: 618 YNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVL 677

Query: 525 HIAVPPNAYTYRVMLLSFCKERNIKM 550
              + P   T+ +++ +  K   I++
Sbjct: 678 SRGIIPTVITWNILVRAVIKYGPIQV 703



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 105/494 (21%), Positives = 206/494 (41%), Gaps = 13/494 (2%)

Query: 123 LLFLRIYWRGEMYGMVLEAFDEMGR-FGFTPNTFARNIVMDVLFKIGR--------VDLG 173
           L+ L  + R  M    L+AF  +    G  P   + N ++D   +  R          L 
Sbjct: 87  LVVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLS 146

Query: 174 IKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKM 233
                    PN  ++NI L +LC   D+     +   + R+   P+   +  L+    K 
Sbjct: 147 HGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQ 206

Query: 234 GRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN-GCSPNVVT 292
            R+  A  LL  M        V  +  L+ G  +    +    +W+K+V++ G  PN+ T
Sbjct: 207 DRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLAT 266

Query: 293 YTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
           Y  ++ G  +   F       + + +    PD++ + +LI  L + G  D A  VY  ++
Sbjct: 267 YNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEII 326

Query: 353 ELKLVPDSYTFCSLLSTVCLSGRFSLLPKL--VCGLEVEADLVVYNALLSYFCKAGFPNQ 410
           +  LV D+  + SL+   C +GR     K     G     +L  YN ++     +G  ++
Sbjct: 327 KTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDE 386

Query: 411 AVKLYNTM-LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
           A++L++ +  D    PD  +F  L+ GLC     ++A  +++   ++   ++   +++++
Sbjct: 387 AIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMI 446

Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
           + L   GR   A++++ +   +    +   Y   I G  +  RT +A  +YS+M      
Sbjct: 447 NGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCS 506

Query: 530 PNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQ 589
           P   TY  ++   CK    +    + +++++     D  T   L + +F       A++ 
Sbjct: 507 PTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSI 566

Query: 590 LVEMCNLGLIPDEM 603
             ++   GL  D M
Sbjct: 567 WKQILYKGLKVDVM 580



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 103/442 (23%), Positives = 189/442 (42%), Gaps = 52/442 (11%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV ++  +I  + R +G  +    +  E+ + G VI A  +   ++ + +    G V EA
Sbjct: 298 DVITYGILIHGLCR-SGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQA---GRVQEA 353

Query: 142 FDEMGRFGFTP--NTFARNIVMDVLFKIGRVDLGIKVLKETQ-----LPNFLSFNIALCN 194
           +      GF    N    NI++  LF  G VD  I++    +     +P+ ++F   +  
Sbjct: 354 WKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHG 413

Query: 195 LCKLNDVSNVKDVIGMMVR-KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
           LC+ N  +N    I    R  G   +V  +  ++N  C +GR+ +A ++   M   G   
Sbjct: 414 LCQ-NGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKP 472

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
           + + +  LI GF ++ R   A  ++ KM  NGCSP V+TY +LI G  +A+ +  A S  
Sbjct: 473 NSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVA 532

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
             +   G  PD+  +  LI  L      DDAL ++  +L   L  D      L+  +C +
Sbjct: 533 REMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSA 592

Query: 374 GRFSLLPKLVCGLEVE----ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
           G+      +   ++ +     +LV YN L+    + G+ ++A  L+ ++ + G  PD  S
Sbjct: 593 GKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIIS 652

Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
           +   ++GLC   +I                                   H+ IQL    +
Sbjct: 653 YNTRIKGLCSCDRI-----------------------------------HEGIQLLDEVL 677

Query: 490 VEKYPLDVVSYTVAIRGLLEGG 511
                  V+++ + +R +++ G
Sbjct: 678 SRGIIPTVITWNILVRAVIKYG 699


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 110/460 (23%), Positives = 217/460 (47%), Gaps = 10/460 (2%)

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLND 200
           M + G  PN  + + ++D LFK G+ +  + + KET       N ++FN  +  LCK+  
Sbjct: 455 MLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGR 514

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
           ++  ++++  M      P+   +  L + +CK+G++  A  L+  M  LG + SV  +  
Sbjct: 515 MAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNS 574

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
            I G    ++      +  +M   G SPN+VTY +LI G+ +      A +    + + G
Sbjct: 575 FITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNG 634

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
             P++   + L+ C  K G  D+A  V   L+ + ++P     CS+ ST+ +     ++ 
Sbjct: 635 MNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPG----CSI-STIEIDKISHVVD 689

Query: 381 KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
            +  G    A+ V++N ++   CK+G    A  L+ ++ +K F PDN+++  L+ G   +
Sbjct: 690 TIADGNPHSAN-VMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAAS 748

Query: 441 RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSY 500
             IDEA ++   ++      N   + +++  L ++G+  +A+ LF +   +    + ++Y
Sbjct: 749 GSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITY 808

Query: 501 TVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
              I    + G+T EA+ L  +M    + P   TY +++   C +  ++   +LL  +I+
Sbjct: 809 NTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIE 868

Query: 561 ARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
             ++ +Y T   L     K  +         EM   GL+P
Sbjct: 869 NNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLP 908



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/430 (24%), Positives = 201/430 (46%), Gaps = 35/430 (8%)

Query: 119 AQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK 178
           A +F L LR +         L  FD MG+ G  P+  + N +++ L + G  D G+  + 
Sbjct: 148 AVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSG--DPGMAAM- 204

Query: 179 ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAE 238
                                       V G M   G  P+     I+   +C+ GR+A+
Sbjct: 205 ----------------------------VYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQ 236

Query: 239 AYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIK 298
           A + +  M  +G  +++ A+  ++D +  +   + A  + E + + G SPNVVTYT L+K
Sbjct: 237 AVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVK 296

Query: 299 GF-MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
           G+  + +M        +M E+     D V + ++I+   + G  DDA  V + + +  + 
Sbjct: 297 GYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIH 356

Query: 358 PDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKL 414
            + + + ++++ +C  GR   + K++  +E   +  D   YN L+  +C+ G   +A ++
Sbjct: 357 VNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEM 416

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
              M+  G      ++  LL+G C    ID+A+ ++  ++    A N    + ++D L +
Sbjct: 417 CRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFK 476

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
           AG+  +A+ L++  +      +V+++   I GL + GR  EA  L  +MK +  PP++ T
Sbjct: 477 AGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLT 536

Query: 535 YRVMLLSFCK 544
           YR +   +CK
Sbjct: 537 YRTLFDGYCK 546



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 127/572 (22%), Positives = 226/572 (39%), Gaps = 69/572 (12%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFG-FTPNTFA 156
           G  E  R I+  L R G      T+ L ++ Y +            EM   G    +  A
Sbjct: 267 GWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVA 326

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQLP----NFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
             ++++   + GR+D   +V  E +      N   +N  +  LCKL  +  V+ V+  M 
Sbjct: 327 YGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEME 386

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
             G  P+   +  L++ +C+ G + +A+++  +M+  G + +   +  L+ GF  L  +D
Sbjct: 387 DVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAID 446

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A  LW  M++ G +PN ++ ++L+ G  +A     A +      + G A +++  N +I
Sbjct: 447 DALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVI 506

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE----- 387
           + L K+G   +A ++ D + EL+  PDS T+ +L    C  G+      L+  +E     
Sbjct: 507 NGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFA 566

Query: 388 ---------------------------------VEADLVVYNALLSYFCKAGFPNQAVKL 414
                                            +  +LV Y AL++ +CK G  ++A  L
Sbjct: 567 PSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNL 626

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM------------------- 455
           Y  M++ G  P+ +    L+       K+DEA  V Q +V                    
Sbjct: 627 YFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISH 686

Query: 456 -------NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
                   NP     +   I+  L ++GR   A  LF     +++  D  +Y+  I G  
Sbjct: 687 VVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCA 746

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
             G  +EA+ L   M    + PN  TY  ++   CK   +     L   +    I  +  
Sbjct: 747 ASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGI 806

Query: 569 TSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           T   L     K   ++ A     +M   G+ P
Sbjct: 807 TYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQP 838



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 105/514 (20%), Positives = 221/514 (42%), Gaps = 18/514 (3%)

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           + G++   G +    T  +  + Y R       +E  +EM   G   N  A + VMD   
Sbjct: 205 VYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYC 264

Query: 166 KIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG-FYPNV 220
            +G  +   ++L+  Q     PN +++ + +   CK   +   + V+  M   G    + 
Sbjct: 265 GMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDE 324

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
             + +++N +C+ GR+ +A ++   M   G  +++  +  +I+G  +L R++    + ++
Sbjct: 325 VAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQE 384

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           M   G  P+  +Y +LI G+        AF    M+   G A   + +N L+     + +
Sbjct: 385 MEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHA 444

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL---LPKLVCGLEVEADLVVYNA 397
            DDAL ++  +L+  + P+  +  +LL  +  +G+      L K      +  +++ +N 
Sbjct: 445 IDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNT 504

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
           +++  CK G   +A +L + M +    PD+ ++  L  G C   ++  A ++   +    
Sbjct: 505 VINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLG 564

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAY 517
            A +  +  + +     A + HK   +           ++V+Y   I G  + G   EA 
Sbjct: 565 FAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEAC 624

Query: 518 ILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID---------ARIELDYH 568
            LY +M +  + PN +    ++  F KE  +     +LQ +++         + IE+D  
Sbjct: 625 NLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKI 684

Query: 569 TSIRLTKFIFKFHSSSSAVNQLV-EMCNLGLIPD 601
           + +  T      HS++   N ++  +C  G I D
Sbjct: 685 SHVVDTIADGNPHSANVMWNVIIFGLCKSGRIAD 718



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 134/290 (46%), Gaps = 12/290 (4%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLN--DV 201
           EM   G  PN F  + +M   +K G+VD    VL++         NI +   C ++  ++
Sbjct: 629 EMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKL-------VNIDMIPGCSISTIEI 681

Query: 202 SNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVL 261
             +  V+  +     +    M+ +++   CK GRIA+A  L   +           ++ L
Sbjct: 682 DKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSL 741

Query: 262 IDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH 321
           I G      +D A  L + M+  G +PN++TY SLI G  ++   S A +  + L+S+G 
Sbjct: 742 IHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGI 801

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPK 381
           +P+ + +N LID   K G   +A  +   ++E  + P   T+  L+  +C  G      K
Sbjct: 802 SPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIK 861

Query: 382 LVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
           L+  +    V+ + + Y  L+  + K+G   +  KLY+ M  +G  P N+
Sbjct: 862 LLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNW 911



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 72/323 (22%), Positives = 152/323 (47%), Gaps = 12/323 (3%)

Query: 289 NVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVY 348
           + V++  L++   +A   S A +  D +   G  P L   N L++ L + G    A  VY
Sbjct: 147 SAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVY 206

Query: 349 DGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV---CGLEVEADLVVYNALLSYFCKA 405
             +    ++PD +T   +    C  GR +   + V    G+ +E +LV Y+A++  +C  
Sbjct: 207 GQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGM 266

Query: 406 GFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV-MNNPAVNAHV 464
           G+   A ++  ++  KG +P+  ++  L++G C   +++EA  V + +    +  V+   
Sbjct: 267 GWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVA 326

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
           +  +++   + GR   A ++          +++  Y   I GL + GR EE   +  +M+
Sbjct: 327 YGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEME 386

Query: 525 HIAVPPNAYTYRVMLLSFCKERNIK----MVKRLLQDVIDARIELDYHTSIRLTKFIFKF 580
            + + P+ Y+Y  ++  +C+E +++    M + ++++ + A   L Y+T   L K     
Sbjct: 387 DVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGL-AATTLTYNT---LLKGFCSL 442

Query: 581 HSSSSAVNQLVEMCNLGLIPDEM 603
           H+   A+     M   G+ P+E+
Sbjct: 443 HAIDDALRLWFLMLKRGVAPNEI 465


>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
 gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
          Length = 802

 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 119/485 (24%), Positives = 218/485 (44%), Gaps = 31/485 (6%)

Query: 104 RGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVM-- 161
           + I+  + + GC      F   +  Y     Y    +    M   G  P   A NI +  
Sbjct: 162 KRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGS 221

Query: 162 ----DVLFKIGRVDLGIKVLKE-----TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
               + L     + L  KV +E       L    + N A C LC +        +I +M+
Sbjct: 222 ICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARC-LCGMGKFDMAFQIIKVMM 280

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
            KGF P+   +  ++   C+  ++ +A+ L   M ++G +  V  +T+LID F +   ++
Sbjct: 281 GKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIE 340

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A   +++M   GCS NVVTYT+L+  +++AK    A    + +   G  P+ + ++ L+
Sbjct: 341 QARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALV 400

Query: 333 DCLSKMGSYDDALDVYDGLLEL----------------KLVPDSYTFCSLLSTVCLSGRF 376
           D L K G    A +VY  L+                   + P+  T+ +L+  +C + + 
Sbjct: 401 DGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKV 460

Query: 377 SLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
               +L+  +     E + ++Y+AL+  FCK G  + A +++  M   G+ P  +++  L
Sbjct: 461 VDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSL 520

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           +  +   R++D A+ V   +V ++   N   +TA++D L   G C KA++L      +  
Sbjct: 521 IDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGC 580

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
             +VV+YT  I GL + G+ + +  L+ QM      PN  TYRV++   C    +     
Sbjct: 581 SPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHS 640

Query: 554 LLQDV 558
           LL ++
Sbjct: 641 LLSEM 645



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 116/512 (22%), Positives = 220/512 (42%), Gaps = 58/512 (11%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV ++  +I    +  G  E  R    E+  +GC     T+   L  Y + +      + 
Sbjct: 322 DVYTYTILIDSFCK-AGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDI 380

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK--------------------ETQ 181
           F+ M   G  PNT   + ++D L K G +    +V                      ++ 
Sbjct: 381 FNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSI 440

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
            PN +++   +  LCK + V + ++++  M+  G  PN  +++ L++ FCK+G+I  A +
Sbjct: 441 APNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQE 500

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           +   M   G   +V+ +T LID   + RRLD+A  +  +MV++ C+PNVVTYT++I G  
Sbjct: 501 VFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLC 560

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
                  A   L M+E +G +P++V +  LID L K G  D +L ++  +      P   
Sbjct: 561 RIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAP--- 617

Query: 362 TFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
                                        + V Y  L+++ C AG  ++A  L + M   
Sbjct: 618 -----------------------------NYVTYRVLINHCCAAGLLDEAHSLLSEMKQT 648

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
            +      +  +++G   ++K   ++ + + +  +     A V+  ++D   +AGR  +A
Sbjct: 649 YWPKYLQGYCSVVQGF--SKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEA 706

Query: 482 IQLFRRAIVEKYPLDVVS---YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
           ++L +  +     L++ S   YT  I+ L    + E+A+ LYS++    V P    +  +
Sbjct: 707 LELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCL 766

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
           +    K        +L   + D  +    + S
Sbjct: 767 IKGLIKVNKWNEALQLCYSICDEGVNWQSNNS 798



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/449 (22%), Positives = 194/449 (43%), Gaps = 33/449 (7%)

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
           +PN +++   L    K   +   K +I MM+++G  PN  +F  L++ +C       AY+
Sbjct: 139 IPNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYK 198

Query: 242 LLGLMITLGTSLSVNAWTVLID---GFRRLRRLDM---AGYLWEKMVQNGCSPNVVTYTS 295
           LL  M   G      A+ + I    G   L   D+   A  ++E+M+ + C  N V   +
Sbjct: 199 LLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTAN 258

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
             +       F +AF  + ++  +G  PD   ++ +I  L +    + A  ++  +  + 
Sbjct: 259 FARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVG 318

Query: 356 LVPDSYTFCSLLSTVCLSGR-------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFP 408
           + PD YT+  L+ + C +G        F  +  + C     A++V Y ALL  + KA   
Sbjct: 319 VNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGC----SANVVTYTALLHAYLKAKQL 374

Query: 409 NQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY----------------QG 452
            QA  ++N M+D G  P+  ++  L+ GLC A +I +A  VY                +G
Sbjct: 375 PQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEG 434

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
              ++ A N   + A++D L +A +   A +L    +      + + Y   I G  + G+
Sbjct: 435 KHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGK 494

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
            + A  ++ +M      P  +TY  ++ +  K+R + +  ++L  ++++    +  T   
Sbjct: 495 IDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTA 554

Query: 573 LTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           +   + +      A+  L  M   G  P+
Sbjct: 555 MIDGLCRIGECQKALKLLSMMEEKGCSPN 583



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 106/489 (21%), Positives = 208/489 (42%), Gaps = 38/489 (7%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFL-------SFNIALCNLC 196
           E+  FG+ P+    N ++ VL   G++D+G +V KE     F         F  ALC   
Sbjct: 30  ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEG 89

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
           + +D       + M+ R+ F  +  +   +++   +     EA   L  M       +V 
Sbjct: 90  RWSDA------LVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVV 143

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
            +  L+ GF + ++L     +   M++ GC+PN   + SL+  +  A+ +  A+  L  +
Sbjct: 144 TYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRM 203

Query: 317 ESEGHAPDLVFHNVLIDCL---SKMGSYD---DALDVYDGLLELKLVPDSYTFCSLLSTV 370
              G  P  V +N+ I  +    ++ S D    A  VY+ +L    V +     +    +
Sbjct: 204 ADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCL 263

Query: 371 CLSGRFSL---LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           C  G+F +   + K++ G     D   Y+ ++++ C+A    +A  L+  M   G  PD 
Sbjct: 264 CGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDV 323

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
           Y++  L+   C A  I++A + +  +     + N   +TA++   ++A +  +A  +F R
Sbjct: 324 YTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNR 383

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM---------------KHI-AVPPN 531
            I    P + ++Y+  + GL + G  ++A  +Y+++               KH  ++ PN
Sbjct: 384 MIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPN 443

Query: 532 AYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLV 591
             TY  ++   CK   +   + LL  ++    E ++     L     K     +A    +
Sbjct: 444 VVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFL 503

Query: 592 EMCNLGLIP 600
            M   G +P
Sbjct: 504 RMSKCGYLP 512


>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
          Length = 946

 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 123/477 (25%), Positives = 212/477 (44%), Gaps = 35/477 (7%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVL------FKI 167
           GC    + F   +  Y     +    +   +M + G  P     NI++  +         
Sbjct: 326 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNF 385

Query: 168 GRVDLGIKVLKETQLP-------NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV 220
             +DL  K   E           N  SF   LC+  K     +V   I  M+ +GF P+ 
Sbjct: 386 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSV---IREMIGQGFIPDT 442

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
             +  +LN  C   ++  A+ L   M   G    V  +T+++D F +   ++ A   + +
Sbjct: 443 STYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNE 502

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           M + GC+PNVVTYT+LI  +++AK  S A    + + SEG  P++V ++ LID   K G 
Sbjct: 503 MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 562

Query: 341 YDDALDVYDGLLELKLVPD----------------SYTFCSLLSTVCLSGRFSLLPKLVC 384
            + A  +++ +   K VPD                  T+ +LL   C S R     KL+ 
Sbjct: 563 VEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLD 622

Query: 385 GLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
            + +E    + +VY+AL+   CK G  ++A ++   M + GF    Y++  L+      +
Sbjct: 623 AMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVK 682

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYT 501
           + D A  V   ++ N+ A N  ++T ++D L + G+  +A +L +    +    +VV+YT
Sbjct: 683 RQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYT 742

Query: 502 VAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
             I G    G+ E    L  +M    V PN  TYRV++   CK   + +   LL+++
Sbjct: 743 AMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 799



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 134/649 (20%), Positives = 246/649 (37%), Gaps = 89/649 (13%)

Query: 61  PSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQ 120
           PS +I  SFF+W  +Q  Y H    ++ ++ ++ R     +     + ++      +  Q
Sbjct: 104 PSAVI--SFFVWAGRQIGYKHTAPVYNALVDLIVRDDDE-KVPEEFLQQIRDDDKEVFGQ 160

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET 180
              + +R + R   + + LE    +  F F P+    N ++    K  R+D    + +E 
Sbjct: 161 FLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREM 220

Query: 181 QLPNFLSFNIAL-CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEA 239
            L N       L C    L  V   ++ + ++  + F P+   +  L++  C+     EA
Sbjct: 221 SLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEA 280

Query: 240 YQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG 299
              L  M       +V  ++ L+ G    ++L     +   M+  GC P+   + SL+  
Sbjct: 281 MDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHA 340

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID-------------------------- 333
           +  +   S A+  L  +   GH P  V +N+LI                           
Sbjct: 341 YCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLA 400

Query: 334 ---------------CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR--- 375
                          CL   G Y+ A  V   ++    +PD+ T+  +L+ +C + +   
Sbjct: 401 AGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMEL 460

Query: 376 -FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
            F L  ++  G  V AD+  Y  ++  FCKAG   QA K +N M + G TP+  ++  L+
Sbjct: 461 AFLLFEEMKRGGLV-ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 519

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
                A+K+  A  +++ ++      N   ++A++D   +AG+  KA Q+F R    K  
Sbjct: 520 HAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDV 579

Query: 495 LD----------------VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            D                VV+Y   + G  +  R EEA  L   M      PN   Y  +
Sbjct: 580 PDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDAL 639

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGL 598
           +   CK   +   + +  ++ +       +T   L    FK      A   L +M     
Sbjct: 640 IDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSC 699

Query: 599 IP------------------DEMWRKLGLLSDETMTP-----VSLFDGF 624
            P                  DE ++ + ++ ++   P      ++ DGF
Sbjct: 700 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 748



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 118/521 (22%), Positives = 224/521 (42%), Gaps = 31/521 (5%)

Query: 108 GELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKI 167
            E+   G V+       F R       Y        EM   GF P+T   + V++ L   
Sbjct: 396 SEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNA 455

Query: 168 GRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMF 223
            +++L   + +E +    + +  ++ I + + CK   +   +     M   G  PNV  +
Sbjct: 456 SKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTY 515

Query: 224 EILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV- 282
             L++ + K  +++ A +L   M++ G   ++  ++ LIDG  +  +++ A  ++E+M  
Sbjct: 516 TALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCG 575

Query: 283 ---------------QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
                           N   PNVVTY +L+ GF ++     A   LD +  EG  P+ + 
Sbjct: 576 SKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIV 635

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL- 386
           ++ LID L K+G  D+A +V   + E       YT+ SL+       R  L  K++  + 
Sbjct: 636 YDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 695

Query: 387 --EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
                 ++V+Y  ++   CK G  ++A KL   M +KG  P+  ++  ++ G     KI+
Sbjct: 696 ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIE 755

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
             + + + +     A N   +  ++D   + G    A  L        +P    ++T   
Sbjct: 756 TCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWP----THTAGY 811

Query: 505 RGLLEGGRTE--EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
           R ++EG   E  E+  L  ++      P    YR+++ +  K + ++M  RLL++V    
Sbjct: 812 RKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFS 871

Query: 563 IEL-DYHTSIR-LTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
             L DY ++   L + +   +   +A     EM   G+IP+
Sbjct: 872 ATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPE 912



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 114/530 (21%), Positives = 225/530 (42%), Gaps = 66/530 (12%)

Query: 53  VHSTLLN--CPSDLIALSFFIWCAKQRD-YFHDVQSFDHMISVVTRLTGRFETVRGIVGE 109
            +S +LN  C +  + L+F ++   +R     DV ++  M+    +  G  E  R    E
Sbjct: 444 TYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCK-AGLIEQARKWFNE 502

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
           +  VGC     T+   +  Y + +      E F+ M   G  PN    + ++D   K G+
Sbjct: 503 MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 562

Query: 170 VDLGIKVLKE--------------------TQLPNFLSFNIALCNLCKLNDVSNVKDVIG 209
           V+   ++ +                     ++ PN +++   L   CK + V   + ++ 
Sbjct: 563 VEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLD 622

Query: 210 MMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLR 269
            M  +G  PN  +++ L++  CK+G++ EA ++   M   G   ++  ++ LID + +++
Sbjct: 623 AMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVK 682

Query: 270 RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHN 329
           R D+A  +  KM++N C+PNVV YT +I G  +      A+  + M+E +G  P++V + 
Sbjct: 683 RQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYT 742

Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE 389
            +ID    +G  +  L++ + +    + P                               
Sbjct: 743 AMIDGFGMIGKIETCLELLERMGSKGVAP------------------------------- 771

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            + V Y  L+ + CK G  + A  L   M    +      +  ++ G    ++  E++ +
Sbjct: 772 -NYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGL 828

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
              I  ++ A    V+  ++D LI+A R   A++L     V  +   +V Y+     L+E
Sbjct: 829 LDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEE--VATFSATLVDYSSTYNSLIE 886

Query: 510 ----GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
                 + E A+ L+S+M    V P   ++  ++      RN K+ + LL
Sbjct: 887 SLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLF--RNSKISEALL 934


>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
          Length = 897

 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 112/460 (24%), Positives = 207/460 (45%), Gaps = 48/460 (10%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P   +F +A   LC+L        ++  M R G  P+  +++ +++  C  G + EA  L
Sbjct: 157 PTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATL 216

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           L  M+ +G +  VN +  ++ G   L R+  A  L ++M+  GC P V+TY  L++G   
Sbjct: 217 LNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCR 276

Query: 303 AKMFSIAFSFLDMLESEGHAPDL---VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
            +    A + L      G  P+L   +F+ V+  CL++ G   +A ++Y+ +      PD
Sbjct: 277 VRQADEARAML------GRVPELNVVLFNTVIGGCLAE-GKLAEATELYETMGLKGCQPD 329

Query: 360 SYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYN 416
           ++T+  L+  +C  GR     +L+  +E +    ++V Y  +L  FCK G  +    L  
Sbjct: 330 AHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLE 389

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN--NPAV-------------- 460
            M  KG T ++  + G++  LC   ++DEA+ + Q +     NP +              
Sbjct: 390 EMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNE 449

Query: 461 -------------------NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYT 501
                              N   +  I+  L+  GR   A++L +  I+    LDVVSY 
Sbjct: 450 QMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYN 509

Query: 502 VAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
             I+ + + G  + + +L  +M    + PN  +Y +++   CKER ++    L + +++ 
Sbjct: 510 GLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQ 569

Query: 562 RIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            +  D  T   L   + K     +A+N L ++ N  + PD
Sbjct: 570 GLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPD 609



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 94/405 (23%), Positives = 180/405 (44%), Gaps = 9/405 (2%)

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA---FDEMGRFGFTPNTFARNIVMD 162
           ++ E+  +GC     TF   +R        G V EA    D M   G  P       ++ 
Sbjct: 216 LLNEMLLMGCAADVNTFDDVVRGMC---GLGRVREAARLVDRMMTKGCMPGVMTYGFLLQ 272

Query: 163 VLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
            L ++ + D    +L      N + FN  +        ++   ++   M  KG  P+   
Sbjct: 273 GLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHT 332

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           + IL++  CK+GRI  A +LL  M   G + +V  +T+++  F +    D    L E+M 
Sbjct: 333 YSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMS 392

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
             G + N   Y  +I    +      A   +  + S+G  PD+  +N +I  L      +
Sbjct: 393 AKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQME 452

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALL 399
           +A  +++ LLE  +V +  T+ +++  +   GR+    +L   + +     D+V YN L+
Sbjct: 453 EAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLI 512

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
              CK G  ++++ L   M +KG  P+N S+  L+  LC  R++ +A+ + + ++    A
Sbjct: 513 KAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLA 572

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
            +   +  +++ L + G  H A+ L  +   E    D+++Y + I
Sbjct: 573 PDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILI 617



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 104/474 (21%), Positives = 210/474 (44%), Gaps = 17/474 (3%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA---FDEMGRFGFTPNT 154
           GR +    ++  +AR GCV  A  +   +         G V EA    +EM   G   + 
Sbjct: 173 GRADEALALLRGMARHGCVPDAVLYQTVIHALCD---QGGVTEAATLLNEMLLMGCAADV 229

Query: 155 FARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGM 210
              + V+  +  +GRV    +++        +P  +++   L  LC++      + ++G 
Sbjct: 230 NTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGR 289

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           +       NV +F  ++      G++AEA +L   M   G     + +++L+ G  +L R
Sbjct: 290 VPEL----NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGR 345

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           +  A  L  +M + G +PNVVTYT ++  F +  M+    + L+ + ++G   +   +N 
Sbjct: 346 IGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNG 405

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE- 389
           +I  L K G  D+A+ +   +      PD  ++ +++  +C + +      +   L  E 
Sbjct: 406 MIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEG 465

Query: 390 --ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
             A+ + YN ++    + G    AV+L   M+  G + D  S+ GL++ +C    +D ++
Sbjct: 466 VVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSL 525

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            + + +       N   +  ++  L +  R   A++L ++ + +    D+V+Y   I GL
Sbjct: 526 VLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGL 585

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
            + G    A  L  ++ +  V P+  TY +++   CK R +     LL   + A
Sbjct: 586 CKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAA 639



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 70/306 (22%), Positives = 137/306 (44%), Gaps = 10/306 (3%)

Query: 299 GFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP 358
           G   A+ F++   +  M+  +   P      V    L ++G  D+AL +  G+     VP
Sbjct: 136 GLPRARRFAL---YRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVP 192

Query: 359 DSYTFCSLLSTVCLSGRFSLLPKLVCG---LEVEADLVVYNALLSYFCKAGFPNQAVKLY 415
           D+  + +++  +C  G  +    L+     +   AD+  ++ ++   C  G   +A +L 
Sbjct: 193 DAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLV 252

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
           + M+ KG  P   ++  LL+GLC  R+ DEA    + ++   P +N  +   ++   +  
Sbjct: 253 DRMMTKGCMPGVMTYGFLLQGLCRVRQADEA----RAMLGRVPELNVVLFNTVIGGCLAE 308

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
           G+  +A +L+    ++    D  +Y++ + GL + GR   A  L  +M+     PN  TY
Sbjct: 309 GKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTY 368

Query: 536 RVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCN 595
            ++L SFCK       + LL+++    + L+      +   + K      A+  + EM +
Sbjct: 369 TIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRS 428

Query: 596 LGLIPD 601
            G  PD
Sbjct: 429 QGCNPD 434



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/192 (23%), Positives = 81/192 (42%), Gaps = 4/192 (2%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           + E    +   L   G V    T+   +    R   +   +    EM   G + +  + N
Sbjct: 450 QMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYN 509

Query: 159 IVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
            ++  + K G VD  + +L+E       PN +S+NI +  LCK   V +  ++   M+ +
Sbjct: 510 GLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQ 569

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           G  P++  +  L+N  CKMG +  A  LL  +        +  + +LI    ++R LD A
Sbjct: 570 GLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDA 629

Query: 275 GYLWEKMVQNGC 286
             L  + +   C
Sbjct: 630 AMLLNRAMAAVC 641


>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 121/561 (21%), Positives = 253/561 (45%), Gaps = 45/561 (8%)

Query: 83  VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF 142
           ++S++ +++ +   + +++           +G     QT+ + ++I  R + +    E  
Sbjct: 89  IRSYNSLLNALIE-SNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELL 147

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKL 198
           + M   GF+P+ F+   +++ L K G +   +K+  E       P+   +NI +    K 
Sbjct: 148 NWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKK 207

Query: 199 NDVSNVKDVIGMMVR-KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            D+ N  ++   +++    YPN+  + +++N  CK G+  E++++   M        +  
Sbjct: 208 GDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYT 267

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           ++ LI G      LD A  ++++M +NG SP+VV Y +++ G++ A           ++E
Sbjct: 268 YSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVME 327

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG--- 374
            EG    +V +N+LI  L +    D+A+ +++ L E     DS T+  L+  +C +G   
Sbjct: 328 KEG-CRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLN 386

Query: 375 -RFSLLPK---------------LVCGLEVEADL-------------------VVYNALL 399
              S+L +               ++ GL  E  L                    V NA++
Sbjct: 387 KALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVI 446

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
           + F +A     A++ +  M+ KG  P   ++  L+ GL  A +  EA  + + ++     
Sbjct: 447 NGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWK 506

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            N   ++ +++ L +  +   A+ L+ +A+ + +  DV  + + I GL   G+ E+A  L
Sbjct: 507 PNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQL 566

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK 579
           YS+MK     PN  T+  ++  F K R+ +   ++   ++   ++ D  +     K +  
Sbjct: 567 YSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCS 626

Query: 580 FHSSSSAVNQLVEMCNLGLIP 600
            H  S AV  L +  + G++P
Sbjct: 627 CHRISDAVGFLNDAVDRGVLP 647



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 113/517 (21%), Positives = 210/517 (40%), Gaps = 55/517 (10%)

Query: 124 LFLRIYWRGEMYGMVLEAFDEMGR-FGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL 182
           L    Y +  M    L+ F  M   FG  P   + N +++ L +  + D         + 
Sbjct: 58  LVAHAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFET 117

Query: 183 ----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAE 238
               PN  ++NI +   C+       K+++  M  +GF P+V  +  L+N   K G +++
Sbjct: 118 MGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSD 177

Query: 239 AYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN-GCSPNVVTYTSLI 297
           A +L   M   G +  V  + +LIDGF +   +  A  +WE++++     PN+ +Y  +I
Sbjct: 178 ALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMI 237

Query: 298 KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
            G  +   F  +F     ++      DL  ++ LI  L   G+ D A  VY  + E  + 
Sbjct: 238 NGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVS 297

Query: 358 PDSYTFCSLLSTVCLSGR-----------------------------------------F 376
           PD   + ++L+    +GR                                         +
Sbjct: 298 PDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIW 357

Query: 377 SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
            LLP+  C     AD + Y  L+   CK G+ N+A+ +     +     D +++  ++ G
Sbjct: 358 ELLPEKDCC----ADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMING 413

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
           LC   ++DE   V   +  +    N +V  A+++  + A +   A++ F   + +     
Sbjct: 414 LCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPT 473

Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
           VV+Y   I GL +  R  EAY L  +M      PN  TY +++   C+ + + M   L  
Sbjct: 474 VVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWC 533

Query: 557 DVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEM 593
             ++   + D    +++   I     SS  V   +++
Sbjct: 534 QALEKGFKPD----VKMHNIIIHGLCSSGKVEDALQL 566



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 109/483 (22%), Positives = 200/483 (41%), Gaps = 79/483 (16%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQL-PNFLSFNIAL 192
            L+ FDEM   G TP+    NI++D  FK G +    ++  ++LK   + PN  S+N+ +
Sbjct: 178 ALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMI 237

Query: 193 CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
             LCK        ++   M +     ++  +  L++  C  G +  A ++   M   G S
Sbjct: 238 NGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVS 297

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
             V  +  +++G+ R  R++    LW+ M + GC   VV+Y  LI+G  E      A S 
Sbjct: 298 PDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISI 356

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
            ++L  +    D + + VL+  L K G  + AL + +     +   D++ + S+++ +C 
Sbjct: 357 WELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCR 416

Query: 373 SGRFSLLPKL--------------VCGLEVEA------------------------DLVV 394
            GR   +  +              VC   +                           +V 
Sbjct: 417 EGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVT 476

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           YN L++   KA   ++A  L   ML KG+ P+  ++  L+ GLC  +K+D A+N++   +
Sbjct: 477 YNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQAL 536

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQL----------------------------FR 486
                 +  +H  I+  L  +G+   A+QL                            F 
Sbjct: 537 EKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFE 596

Query: 487 RAI-----VEKYPL--DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
           RA      + +Y L  D++SY + ++GL    R  +A    +      V P A T+ +++
Sbjct: 597 RASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILV 656

Query: 540 LSF 542
             +
Sbjct: 657 QGY 659



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 86/399 (21%), Positives = 175/399 (43%), Gaps = 12/399 (3%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV  ++ M++   R  GR E    +   + + GC     ++ + +R  +        +  
Sbjct: 299 DVVVYNTMLNGYLR-AGRIEECLELWKVMEKEGCRT-VVSYNILIRGLFENAKVDEAISI 356

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ-----LPNFLSFNIALCNLC 196
           ++ +       ++    +++  L K G ++  + +L+E +     L  F +++  +  LC
Sbjct: 357 WELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTF-AYSSMINGLC 415

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
           +   +  V  V+  M + G  PN  +   ++N F +  ++ +A +  G M++ G   +V 
Sbjct: 416 REGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVV 475

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
            +  LI+G  +  R   A  L ++M+Q G  PN++TY+ L+ G  + K   +A +     
Sbjct: 476 TYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQA 535

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
             +G  PD+  HN++I  L   G  +DAL +Y  + +   VP+  T  +L+        F
Sbjct: 536 LEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDF 595

Query: 377 SLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
               K+   +    ++ D++ YN  L   C     + AV   N  +D+G  P   ++  L
Sbjct: 596 ERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNIL 655

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
           ++G    +   E + V    +  NP +       + D+L
Sbjct: 656 VQGYLALKGYMEPVFV-PASMKGNPGMQMRYFGFVCDKL 693



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/194 (21%), Positives = 87/194 (44%), Gaps = 5/194 (2%)

Query: 80  FHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVL 139
           F  V +++ +I+ +++   RF     +V E+ + G      T+ L +    +G+   M L
Sbjct: 471 FPTVVTYNTLINGLSK-AERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMAL 529

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNL 195
             + +    GF P+    NI++  L   G+V+  +++  E +    +PN ++ N  +   
Sbjct: 530 NLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGF 589

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
            K+ D      +   +++ G  P++  + I L   C   RI++A   L   +  G   + 
Sbjct: 590 YKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTA 649

Query: 256 NAWTVLIDGFRRLR 269
             W +L+ G+  L+
Sbjct: 650 ITWNILVQGYLALK 663


>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 997

 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 123/477 (25%), Positives = 212/477 (44%), Gaps = 35/477 (7%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVL------FKI 167
           GC    + F   +  Y     +    +   +M + G  P     NI++  +         
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNC 426

Query: 168 GRVDLGIKVLKETQLP-------NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV 220
             +DL  K   E           N  SF   LC+  K     +V   I  M+ +GF P+ 
Sbjct: 427 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSV---IREMIGQGFIPDT 483

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
             +  +LN  C   ++  A+ L   M   G    V  +T+++D F +   ++ A   + +
Sbjct: 484 STYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNE 543

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           M + GC+PNVVTYT+LI  +++AK  S A    + + SEG  P++V ++ LID   K G 
Sbjct: 544 MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 603

Query: 341 YDDALDVYDGLLELKLVPD----------------SYTFCSLLSTVCLSGRFSLLPKLVC 384
            + A  +++ +   K VPD                  T+ +LL   C S R     KL+ 
Sbjct: 604 VEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLD 663

Query: 385 GLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
            + +E    + +VY+AL+   CK G  ++A ++   M + GF    Y++  L+      +
Sbjct: 664 AMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVK 723

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYT 501
           + D A  V   ++ N+ A N  ++T ++D L + G+  +A +L +    +    +VV+YT
Sbjct: 724 RQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYT 783

Query: 502 VAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
             I G    G+ E    L  +M    V PN  TYRV++   CK   + +   LL+++
Sbjct: 784 AMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 133/649 (20%), Positives = 246/649 (37%), Gaps = 89/649 (13%)

Query: 61  PSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQ 120
           PS +I  SFF+W  +Q  Y H    ++ ++ ++ R     +     + ++      +  +
Sbjct: 145 PSAVI--SFFVWAGRQIGYKHTAPVYNALVDLIVRDDDE-KVPEEFLQQIRDDDKEVFGE 201

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET 180
              + +R + R   + + LE    +  F F P+    N ++    K  R+D    + +E 
Sbjct: 202 FLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREM 261

Query: 181 QLPNFLSFNIAL-CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEA 239
            L N       L C    L  V   ++ + ++  + F P+   +  L++  C+     EA
Sbjct: 262 SLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEA 321

Query: 240 YQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG 299
              L  M       +V  ++ L+ G    ++L     +   M+  GC P+   + SL+  
Sbjct: 322 MDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHA 381

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID-------------------------- 333
           +  +   S A+  L  +   GH P  V +N+LI                           
Sbjct: 382 YCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLA 441

Query: 334 ---------------CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR--- 375
                          CL   G Y+ A  V   ++    +PD+ T+  +L+ +C + +   
Sbjct: 442 AGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMEL 501

Query: 376 -FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
            F L  ++  G  V AD+  Y  ++  FCKAG   QA K +N M + G TP+  ++  L+
Sbjct: 502 AFLLFEEMKRGGLV-ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 560

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
                A+K+  A  +++ ++      N   ++A++D   +AG+  KA Q+F R    K  
Sbjct: 561 HAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDV 620

Query: 495 LD----------------VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            D                VV+Y   + G  +  R EEA  L   M      PN   Y  +
Sbjct: 621 PDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDAL 680

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGL 598
           +   CK   +   + +  ++ +       +T   L    FK      A   L +M     
Sbjct: 681 IDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSC 740

Query: 599 IP------------------DEMWRKLGLLSDETMTP-----VSLFDGF 624
            P                  DE ++ + ++ ++   P      ++ DGF
Sbjct: 741 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 118/521 (22%), Positives = 224/521 (42%), Gaps = 31/521 (5%)

Query: 108 GELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKI 167
            E+   G V+       F R       Y        EM   GF P+T   + V++ L   
Sbjct: 437 SEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNA 496

Query: 168 GRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMF 223
            +++L   + +E +    + +  ++ I + + CK   +   +     M   G  PNV  +
Sbjct: 497 SKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTY 556

Query: 224 EILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV- 282
             L++ + K  +++ A +L   M++ G   ++  ++ LIDG  +  +++ A  ++E+M  
Sbjct: 557 TALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCG 616

Query: 283 ---------------QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
                           N   PNVVTY +L+ GF ++     A   LD +  EG  P+ + 
Sbjct: 617 SKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIV 676

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL- 386
           ++ LID L K+G  D+A +V   + E       YT+ SL+       R  L  K++  + 
Sbjct: 677 YDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 736

Query: 387 --EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
                 ++V+Y  ++   CK G  ++A KL   M +KG  P+  ++  ++ G     KI+
Sbjct: 737 ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIE 796

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
             + + + +     A N   +  ++D   + G    A  L        +P    ++T   
Sbjct: 797 TCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWP----THTAGY 852

Query: 505 RGLLEGGRTE--EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
           R ++EG   E  E+  L  ++      P    YR+++ +  K + ++M  RLL++V    
Sbjct: 853 RKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFS 912

Query: 563 IEL-DYHTSIR-LTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
             L DY ++   L + +   +   +A     EM   G+IP+
Sbjct: 913 ATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPE 953



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 114/530 (21%), Positives = 225/530 (42%), Gaps = 66/530 (12%)

Query: 53  VHSTLLN--CPSDLIALSFFIWCAKQRD-YFHDVQSFDHMISVVTRLTGRFETVRGIVGE 109
            +S +LN  C +  + L+F ++   +R     DV ++  M+    +  G  E  R    E
Sbjct: 485 TYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCK-AGLIEQARKWFNE 543

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
           +  VGC     T+   +  Y + +      E F+ M   G  PN    + ++D   K G+
Sbjct: 544 MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 603

Query: 170 VDLGIKVLKE--------------------TQLPNFLSFNIALCNLCKLNDVSNVKDVIG 209
           V+   ++ +                     ++ PN +++   L   CK + V   + ++ 
Sbjct: 604 VEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLD 663

Query: 210 MMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLR 269
            M  +G  PN  +++ L++  CK+G++ EA ++   M   G   ++  ++ LID + +++
Sbjct: 664 AMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVK 723

Query: 270 RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHN 329
           R D+A  +  KM++N C+PNVV YT +I G  +      A+  + M+E +G  P++V + 
Sbjct: 724 RQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYT 783

Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE 389
            +ID    +G  +  L++ + +    + P                               
Sbjct: 784 AMIDGFGMIGKIETCLELLERMGSKGVAP------------------------------- 812

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            + V Y  L+ + CK G  + A  L   M    +      +  ++ G    ++  E++ +
Sbjct: 813 -NYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGL 869

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
              I  ++ A    V+  ++D LI+A R   A++L     V  +   +V Y+     L+E
Sbjct: 870 LDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEE--VATFSATLVDYSSTYNSLIE 927

Query: 510 ----GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
                 + E A+ L+S+M    V P   ++  ++      RN K+ + LL
Sbjct: 928 SLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLF--RNSKISEALL 975


>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 120/472 (25%), Positives = 220/472 (46%), Gaps = 8/472 (1%)

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK---ETQLP-NFLSFNI 190
           Y  V+  F EM   G   +    NIV +      R+D    VL    +T +P N ++FN 
Sbjct: 78  YSAVVSLFREMRILGIPISDSILNIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNT 137

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGF-YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
            L  L   N V++   +   +VR+    PN  M+  ++N   K G   +   LL +M   
Sbjct: 138 LLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQG 197

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
            T   V  ++++ID   +   LD A  L  +M Q    PN+ TY SLI G  +   +   
Sbjct: 198 NTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKV 257

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
            + L  + +    P++   ++LID L K G  +DA +V   ++E  + PD  T+ +++  
Sbjct: 258 KTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDG 317

Query: 370 VCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
            CL G+     ++   L    ++ ++  Y+ L++ +CK     +A++L+  +  KG  PD
Sbjct: 318 YCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPD 377

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
             ++  +L GL    +I +A  ++  ++   P  +  +H+ ++    + G   +A+ LF 
Sbjct: 378 TVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFS 437

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
           +    +   ++  YTV I GL +  R  EA+ ++ ++  I + P+  TY VM+  FC+E 
Sbjct: 438 KLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREG 497

Query: 547 NIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGL 598
               VK +L+ + D     +  T   + +  F+ +  S  V+ + EM   G 
Sbjct: 498 LFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGF 549



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/396 (22%), Positives = 167/396 (42%), Gaps = 20/396 (5%)

Query: 134 MYGMVLEAFDEMGRFGFT-------------PNTFARNIVMDVLFKIGRVDLGIKVLKET 180
           MYG V+    + G    T             P+    +IV+D L K   +D  I +L E 
Sbjct: 170 MYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEM 229

Query: 181 QL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
           +     PN  ++N  +  LCKL     VK ++  MV     PNV  F IL++  CK G++
Sbjct: 230 KQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKV 289

Query: 237 AEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSL 296
            +A +++  MI  G    +  ++ ++DG+    ++D A  ++  +   G  PN+ +Y+ L
Sbjct: 290 EDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSIL 349

Query: 297 IKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
           I G+ + K  + A      +  +G  PD V ++ ++  L ++G   DA  ++D +L +  
Sbjct: 350 INGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGP 409

Query: 357 VPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVK 413
            PD     +LL      G       L   LE    + ++  Y  +++  CK     +A  
Sbjct: 410 TPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHA 469

Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
           ++  +   G  PD  ++  ++ G C     DE   + + +  N    N   +  I+    
Sbjct: 470 IFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFF 529

Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
            + +  + +   +      +  D  +  V I  L E
Sbjct: 530 RSNKISEIVSFMKEMAGRGFSFDATTTGVLINVLKE 565



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 107/254 (42%), Gaps = 4/254 (1%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           L G+ +  R +   L   G      ++ + +  Y + +     ++ F E+ + G  P+T 
Sbjct: 320 LRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTV 379

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKET----QLPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
             + ++  L ++GR+    K+  E       P+    +  L    K   V     +   +
Sbjct: 380 TYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKL 439

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
            R     N+  + +++N  CK  R+ EA+ +   + ++G    V  + V+I GF R    
Sbjct: 440 ERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLF 499

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           D    +  KM  NGC  N +TY  +++GF  +   S   SF+  +   G + D     VL
Sbjct: 500 DEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVL 559

Query: 332 IDCLSKMGSYDDAL 345
           I+ L +  S  D +
Sbjct: 560 INVLKENPSIVDMI 573



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 73/335 (21%), Positives = 138/335 (41%), Gaps = 4/335 (1%)

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           LD A  L+ +MV+    P+V+ ++ L K  +  K +S   S    +   G        N+
Sbjct: 43  LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNI 102

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLVCGL 386
           + +        D A  V    L+  +  +  TF +LL  +    + +    L  KLV   
Sbjct: 103 VTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREK 162

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
             E + V+Y  +++   K G   + + L   M      PD  ++  ++  LC    +D A
Sbjct: 163 ICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAA 222

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
           IN+   +   N   N   + +++D L + G+  K   L    +      +V ++++ I G
Sbjct: 223 INLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDG 282

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           L + G+ E+A  +   M    V P+  TY  ++  +C    +   +R+   + D  I+ +
Sbjct: 283 LCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPN 342

Query: 567 YHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
             +   L     K  + + A+    E+   GL PD
Sbjct: 343 IFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPD 377


>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 499

 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 118/413 (28%), Positives = 193/413 (46%), Gaps = 12/413 (2%)

Query: 115 CVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI 174
           C + A  +   +  + +       L  +  MG+ G  P+T+  N++M+   K  RVD   
Sbjct: 85  CALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVW 144

Query: 175 KVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCF 230
           K+ +E Q     PN ++++I +  +CK   V     V   M  +G  PN+  +  +++  
Sbjct: 145 KLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGL 204

Query: 231 CKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNV 290
            K G + +A+ L   M + G   +   +  LI G  R  R D A  L+ +M+  G  P+ 
Sbjct: 205 GKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDH 264

Query: 291 VTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDG 350
           VT+TSL+ G   A   S A          G A D+  +NVLID L K    D+A +++  
Sbjct: 265 VTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGE 324

Query: 351 LLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGF 407
           L E  LVPD YTF +L+  +C SGR      L+  ++      D+ VYN L+    K+G 
Sbjct: 325 LEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGR 384

Query: 408 PNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTA 467
             +A +L   M   G+ PD  ++  L+   C   +I++A+ +++ I     A N   +  
Sbjct: 385 VEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFA-NTVTYNT 443

Query: 468 IVDRLIEAGRCHKAIQLFRRAIVEKY----PLDVVSYTVAIRGLLEGGRTEEA 516
           I++ L  AGR  +A +LF     E        D V+YT  + G  + G +E A
Sbjct: 444 ILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQAGLSELA 496



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 160/340 (47%), Gaps = 5/340 (1%)

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           +  L++ F K G   +A  +  +M   G       + VL++ F++ +R+D    L+E+M 
Sbjct: 92  YNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQ 151

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFS-FLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
              CSPNV+TY+ LI    +      A   FLDM +S G  P++  +  +ID L K G  
Sbjct: 152 NQNCSPNVITYSILIDAVCKCGGVEKALKVFLDM-KSRGCRPNIFTYTSMIDGLGKSGHV 210

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNAL 398
           D A  +++ +    LV     + SL+  +  SGR     KL   +    ++ D V + +L
Sbjct: 211 DKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSL 270

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           +     AG  ++A +++    D G   D   +  L+  LC ++++DEA  ++  +  +  
Sbjct: 271 VYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGL 330

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
             + +   A++D L ++GR H A  L           DV  Y   I GL + GR EEA  
Sbjct: 331 VPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQ 390

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           L  +M+ +   P+  TY  ++   CK   I+   RL +++
Sbjct: 391 LLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEI 430



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 88/353 (24%), Positives = 170/353 (48%), Gaps = 5/353 (1%)

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
           R+F  L   +   G + ++ + L  M     +L+ +A+  LID F +      A  ++  
Sbjct: 55  RIFIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRV 114

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           M Q+G  P+  T+  L+  F +AK     +   + ++++  +P+++ +++LID + K G 
Sbjct: 115 MGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGG 174

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYN 396
            + AL V+  +      P+ +T+ S++  +  SG     F L  ++     V A  VVYN
Sbjct: 175 VEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLV-ATRVVYN 233

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
           +L+    ++G  + A KL+  ML KG  PD+ +F  L+ GL  A +  EA  ++Q     
Sbjct: 234 SLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDV 293

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
             A++ +++  ++D L ++ R  +A ++F     +    DV ++   + GL + GR  +A
Sbjct: 294 GCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDA 353

Query: 517 YILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
           +IL   MK     P+   Y  ++    K   ++   +LL ++     E D  T
Sbjct: 354 FILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVT 406



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/351 (22%), Positives = 157/351 (44%), Gaps = 3/351 (0%)

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
           SV A T L++     RR + A  +  ++ ++        +  L +G+  A +   +   L
Sbjct: 18  SVRACTTLVEMLGIARRFNEAEEVLAEVEKSRYILQPRIFIELARGYASAGLLEKSVEAL 77

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
             +E    A     +N LID   K G    AL VY  + +  L PD+YTF  L++    +
Sbjct: 78  KRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKA 137

Query: 374 GRFSLLPKLVCGLEVE---ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
            R   + KL   ++ +    +++ Y+ L+   CK G   +A+K++  M  +G  P+ +++
Sbjct: 138 KRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTY 197

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             ++ GL  +  +D+A  +++ +          V+ +++  L  +GR   A +LFR  + 
Sbjct: 198 TSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLS 257

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
           +    D V++T  + GL   GR  EA  ++ + + +    +   Y V++ + CK + +  
Sbjct: 258 KGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDE 317

Query: 551 VKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
              +  ++ +  +  D +T   L   + K      A   L +M   G  PD
Sbjct: 318 AWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPD 368



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 9/225 (4%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           + GR    R I  E   VGC +    + + +    + +      E F E+   G  P+ +
Sbjct: 276 VAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVY 335

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
             N +MD L K GR+     +L + +     P+   +N  +  L K   V     ++  M
Sbjct: 336 TFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEM 395

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
              G+ P+V  +  L++  CK GRI +A +L   +   G + +V  +  +++G     R+
Sbjct: 396 QSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFANTVT-YNTILNGLCMAGRV 454

Query: 272 DMAGYLWEKMVQNGC----SPNVVTYTSLIKGFMEAKMFSIAFSF 312
           D A  L+  M Q        P+ VTYT+L+ G  +A +  +A S 
Sbjct: 455 DEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQAGLSELANSL 499


>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 680

 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 119/472 (25%), Positives = 216/472 (45%), Gaps = 44/472 (9%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFL 186
           + + Y  VL  F +M   G  PN    NI+++   ++G +        K+LK    P+ +
Sbjct: 82  KSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTI 141

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           + N  +   C    +    +    +V  GF+ +   +  L+N  CK+G    A +LL  +
Sbjct: 142 TLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRV 201

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
                 L V  ++ +ID   + + ++ A  L+ +MV    S N+VTY++LI GF      
Sbjct: 202 DGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKL 261

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
             A    + + SE   PD+   N+L+D   K G   +A +    +++  + PD  T+ SL
Sbjct: 262 KDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSL 321

Query: 367 LSTVCLSGRFSLLPKLV----------------------CGL----------------EV 388
           +   CL    ++   ++                      C +                ++
Sbjct: 322 MDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQI 381

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
             +++ YN+L+   CK+G  + A++L + M D+G  PD  ++  +L  LC    +D+AI 
Sbjct: 382 FPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIA 441

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           +   +       N + +T ++D L + GR   A  +F   +V+ Y L V +YTV I+G  
Sbjct: 442 LLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFC 501

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS-FCKERNIKMVKRLLQDVI 559
             G  +EA  L S+MK  +  P+A TY +++ S F K+ N K  ++LL+++I
Sbjct: 502 SHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDK-AEKLLREMI 552



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/424 (22%), Positives = 195/424 (45%), Gaps = 3/424 (0%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           PNF++FNI +   C+L  +     V+  +++ G+ P+       +  FC  G+I +A   
Sbjct: 103 PNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNF 162

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
              ++ LG  L   ++  LI+G  ++     A  L  ++       +VV Y+++I    +
Sbjct: 163 HDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCK 222

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
            K  + AF     + S   + ++V ++ LI     +G   DA+ +++ +    + PD YT
Sbjct: 223 DKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYT 282

Query: 363 FCSLLSTVCLSGRFSLLPK---LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
           F  L+   C  GR         ++    ++ D+V YN+L+  +C     N A  + NTM 
Sbjct: 283 FNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMS 342

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
            +G T    S+  ++ G C  + +D+A+ +++ +       N   + +++D L ++GR  
Sbjct: 343 HRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRIS 402

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
            A++L           D+++Y+  +  L +    ++A  L  ++K   + PN YTY +++
Sbjct: 403 YALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILI 462

Query: 540 LSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLI 599
              CK   ++  + + +D++     L  +T   + +          A++ L +M +   I
Sbjct: 463 DGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCI 522

Query: 600 PDEM 603
           PD +
Sbjct: 523 PDAI 526



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 95/426 (22%), Positives = 175/426 (41%), Gaps = 32/426 (7%)

Query: 176 VLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGR 235
           +L++   P  + F   L +L K      V  +   M  +G  PN   F IL+NCFC++G 
Sbjct: 61  LLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGL 120

Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
           I  A+ +L  ++ +G           I GF    ++  A    +K+V  G   + V+Y +
Sbjct: 121 IPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGT 180

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           LI G  +      A   L  ++ +    D+V ++ +ID + K  + +DA D+Y  ++  +
Sbjct: 181 LINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRR 240

Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLY 415
                                           + +++V Y+AL+S FC  G    A+ L+
Sbjct: 241 --------------------------------ISSNIVTYSALISGFCIVGKLKDAIGLF 268

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
           N M  +   PD Y+F  L+   C   ++ EA N    ++      +   + +++D     
Sbjct: 269 NKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLV 328

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
              + A  +            V SY + I G  +    ++A  L+ +M H  + PN  TY
Sbjct: 329 NEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITY 388

Query: 536 RVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCN 595
             ++   CK   I     L+  + D   + D  T   +   + K H    A+  L+++ +
Sbjct: 389 NSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKD 448

Query: 596 LGLIPD 601
            G+ P+
Sbjct: 449 QGIRPN 454



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 114/262 (43%), Gaps = 3/262 (1%)

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALL 399
           DA+ +++ LL     P    F  +L ++  S  +  +  L   +E   ++ + V +N L+
Sbjct: 53  DAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILI 112

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
           + FC+ G    A  +   +L  G+ PD  +    ++G C   +I +A+N +  +V     
Sbjct: 113 NCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFH 172

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
           ++   +  +++ L + G    A++L RR   +   LDVV Y+  I  + +     +A+ L
Sbjct: 173 LDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDL 232

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK 579
           YS+M    +  N  TY  ++  FC    +K    L   +    I  D +T   L     K
Sbjct: 233 YSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCK 292

Query: 580 FHSSSSAVNQLVEMCNLGLIPD 601
                 A N L  M   G+ PD
Sbjct: 293 EGRVKEAKNGLAMMMKQGIKPD 314


>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 130/563 (23%), Positives = 243/563 (43%), Gaps = 24/563 (4%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
           A+ FF +  + R ++  V   + +I V  R+  R +    +  ++      +   +F + 
Sbjct: 90  AIDFFDYMVRSRPFYTAVDC-NKVIGVFVRMN-RPDVAISLYRKMEIRRIPLNIYSFNIL 147

Query: 126 LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV---LKETQL 182
           ++ +         L  F ++ + GF P+    N ++  L    R+   + +   + ET  
Sbjct: 148 IKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGF 207

Query: 183 ----------------PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEIL 226
                           P  ++FN  +  LC    V     ++  MV KG + +V  +  +
Sbjct: 208 LEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTI 267

Query: 227 LNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGC 286
           +N  CKMG    A  LL  M        V  ++ +ID   +      A YL+ +M++ G 
Sbjct: 268 VNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI 327

Query: 287 SPNVVTYTSLIKGFMEAKMFSIAFSFL-DMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL 345
           +PNV TY  +I GF     +S A   L DM+E E + PD++  N LI    K G   +A 
Sbjct: 328 APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREIN-PDVLTFNALISASVKEGKLFEAE 386

Query: 346 DVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKA 405
            + D +L   + PD+ T+ S++   C   RF    K +  L    D+V +N ++  +C+A
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDD-AKHMFDLMASPDVVTFNTIIDVYCRA 445

Query: 406 GFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVH 465
              ++ ++L   +  +G   +  ++  L+ G C    ++ A +++Q ++ +    +    
Sbjct: 446 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITC 505

Query: 466 TAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKH 525
             ++    E  +  +A++LF    + K  LD V+Y + I G+ +G + +EA+ L+  +  
Sbjct: 506 NILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPI 565

Query: 526 IAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSS 585
             V P+  TY VM+  FC +  I     L   + D   E D  T   L +   K      
Sbjct: 566 HGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDK 625

Query: 586 AVNQLVEMCNLGLIPDEMWRKLG 608
           ++  + EM + G   D    K+ 
Sbjct: 626 SIELISEMRSNGFSGDAFTIKMA 648



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 99/440 (22%), Positives = 200/440 (45%), Gaps = 16/440 (3%)

Query: 134 MYGMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL---KETQL-PNFL 186
           + G VLEA    ++M   G   +      +++ + K+G     + +L   +ET + P+ +
Sbjct: 238 LEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVV 297

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
            ++  +  LCK    S+ + +   M+ KG  PNV  +  +++ FC  GR ++A +LL  M
Sbjct: 298 IYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDM 357

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
           I    +  V  +  LI    +  +L  A  L ++M+     P+ VTY S+I GF +   F
Sbjct: 358 IEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRF 417

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
             A    D++ S    PD+V  N +ID   +    D+ + +   +    LV ++ T+ +L
Sbjct: 418 DDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 473

Query: 367 LSTVC----LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
           +   C    L+    L  +++    V  D +  N LL  FC+     +A++L+  +    
Sbjct: 474 IHGFCEVDNLNAAQDLFQEMI-SHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 532

Query: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI 482
              D  ++  ++ G+C   K+DEA +++  + ++    +   +  ++           A 
Sbjct: 533 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN 592

Query: 483 QLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
            LF +     +  D  +Y   IRG L+ G  +++  L S+M+      +A+T ++     
Sbjct: 593 VLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEII 652

Query: 543 CKERNIKMVKRLLQDVIDAR 562
           C+  + ++++  L+  I+  
Sbjct: 653 CRVSDEEIIENYLRPKINGE 672



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 96/378 (25%), Positives = 159/378 (42%), Gaps = 30/378 (7%)

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           L  G    + LD A   ++ MV++      V    +I  F+      +A S    +E   
Sbjct: 77  LKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRR 136

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
              ++   N+LI C         +L  +  L +L   PD  TF +LL  +CL  R S   
Sbjct: 137 IPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRIS--- 193

Query: 381 KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
                   EA      AL  Y  + GF  +AV L++ M++ G TP   +F  L+ GLC  
Sbjct: 194 --------EA-----LALFGYMVETGFL-EAVALFDQMVEIGLTPVVITFNTLINGLCLE 239

Query: 441 RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSY 500
            ++ EA  +   +V     ++   +  IV+ + + G    A+ L  +        DVV Y
Sbjct: 240 GRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIY 299

Query: 501 TVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
           +  I  L + G   +A  L+S+M    + PN +TY  M+  FC        +RLL+D+I+
Sbjct: 300 SAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE 359

Query: 561 ARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTPVSL 620
             I  D          +  F++  SA  +  ++     + DEM  +   +  +T+T  S+
Sbjct: 360 REINPD----------VLTFNALISASVKEGKLFEAEKLCDEMLHR--CIFPDTVTYNSM 407

Query: 621 FDGFVPCERRAGNANHLL 638
             GF     R  +A H+ 
Sbjct: 408 IYGFCK-HNRFDDAKHMF 424



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 74/333 (22%), Positives = 143/333 (42%), Gaps = 24/333 (7%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
           +R+   DV +F+ +IS   +    FE  + +  E+          T+   +  + +   +
Sbjct: 359 EREINPDVLTFNALISASVKEGKLFEAEK-LCDEMLHRCIFPDTVTYNSMIYGFCKHNRF 417

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIA 191
                 FD M     +P+    N ++DV  +  RVD G+++L+E      + N  ++N  
Sbjct: 418 DDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 473

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           +   C++++++  +D+   M+  G  P+     ILL  FC+  ++ EA +L  ++     
Sbjct: 474 IHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKI 533

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
            L   A+ ++I G  +  ++D A  L+  +  +G  P+V TY  +I GF      S A  
Sbjct: 534 DLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANV 593

Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
               ++  GH PD   +N LI    K G  D ++++   +       D++T       +C
Sbjct: 594 LFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIIC 653

Query: 372 ---------------LSGRFSLLPKLVCGLEVE 389
                          ++G  S +P+ V  L  E
Sbjct: 654 RVSDEEIIENYLRPKINGETSSIPRYVVELAEE 686


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 115/500 (23%), Positives = 217/500 (43%), Gaps = 6/500 (1%)

Query: 83  VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF 142
           V+ ++H++  +     +F+ +  +   + + G +    T+ + L+   + +      + F
Sbjct: 144 VRIYNHLLDALLS-ENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLF 202

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVS 202
            EM   G  P+      ++  L K G++D   + L     P+   +N  +  +CK   + 
Sbjct: 203 VEMSNKGCPPDAVTYTTMVSSLCKAGKID-DARELAGRFKPSVPVYNALIDGMCKEGRIE 261

Query: 203 NVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLI 262
               ++G M+  G  PNV  +  ++N  C  G +  A+ L   M   G   +++ +T LI
Sbjct: 262 VAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLI 321

Query: 263 DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
            G     +L  A  LW+ M+Q+GC PNVV Y +LI G         A    D ++  G  
Sbjct: 322 KGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCL 381

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL 382
           P++  +++LID  +K G    A + ++ ++     P+  T+  ++  +C +  F     L
Sbjct: 382 PNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSL 441

Query: 383 VCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
           V  + +E    + + +N  +   C  G    A+KL   M   G  P+  ++  LL  L  
Sbjct: 442 VEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFR 501

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
             K +EA  ++Q I   N   N   +  ++     AG   +A+QLF +A+V     D ++
Sbjct: 502 MNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSIT 561

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAV-PPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           Y   I    + G+ + A  L  ++  +    P+  TY  ++   C   NI+     L   
Sbjct: 562 YNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKA 621

Query: 559 IDARIELDYHTSIRLTKFIF 578
           I+  I  ++ T   L +  F
Sbjct: 622 INQGICPNFATWNALVRCFF 641



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 139/615 (22%), Positives = 238/615 (38%), Gaps = 110/615 (17%)

Query: 67  LSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFL 126
           L FF   A    + H   ++  MI  + R     + V+ I+ ++   G       F+  +
Sbjct: 58  LGFFSAIANSNAFQHTASTYRVMIERLGR-ECEMDMVQYILQQMKMDGINCCEDLFICII 116

Query: 127 RIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFL 186
             Y R       L+ F  +G FG  P     N ++D L    +           Q+ N L
Sbjct: 117 NGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKF----------QMINPL 166

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
             N                     M + G  PNV  + ILL   CK  R+  A++L   M
Sbjct: 167 YTN---------------------MKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEM 205

Query: 247 ------------ITLGTSL------------------SVNAWTVLIDGFRRLRRLDMAGY 276
                        T+ +SL                  SV  +  LIDG  +  R+++A  
Sbjct: 206 SNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIK 265

Query: 277 LWEKMVQNGCSPNVVTY-----------------------------------TSLIKG-F 300
           L  +M+ NG  PNVV+Y                                   T LIKG F
Sbjct: 266 LLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCF 325

Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
           M  K++  A     ++  +G  P++V +N LI  L   GS ++AL V D +     +P+ 
Sbjct: 326 MRGKLYE-ALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNV 384

Query: 361 YTFCSLLSTVCLSGRF---SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
            T+  L+     SG     S     +       ++V Y  ++   CK    +QA  L   
Sbjct: 385 TTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEK 444

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           M  +G TP+  +F   ++GLCG  +++ A+ + + +  +    N   +  ++D L    +
Sbjct: 445 MTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNK 504

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
             +A  LF+         ++V+Y   + G    G   EA  L+ +       P++ TY  
Sbjct: 505 YEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNT 564

Query: 538 MLLSFCKERNIKMVKRLLQDVIDARIELDYHTS-IRLTKFIF---KFHSSSSAVNQLVEM 593
           M+ ++CK+  +K+  +L++ V   +   ++H   I  T  I+    + +   A+  L + 
Sbjct: 565 MIHAYCKQGKVKIAAQLVERVSSMK---EWHPDIITYTSLIWGACNWMNIEEAMAFLDKA 621

Query: 594 CNLGLIPD-EMWRKL 607
            N G+ P+   W  L
Sbjct: 622 INQGICPNFATWNAL 636



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 106/420 (25%), Positives = 175/420 (41%), Gaps = 46/420 (10%)

Query: 98  GRFETVRGIVGELARVG---------CVIKAQ--------TFLLFLRIYWRGEMYGMVLE 140
           GR E    ++GE+   G         C+I +          F LF +++ RG        
Sbjct: 258 GRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRG-------- 309

Query: 141 AFDEMGRFGFTP---NTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCK 197
              +     FTP     F R  + + L      DL   ++++   PN +++N  +  LC 
Sbjct: 310 --CDANIHTFTPLIKGCFMRGKLYEAL------DLWKLMIQDGCEPNVVAYNTLIHGLCS 361

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              +     V   M R G  PNV  + IL++ F K G +  A +    MI+ G   +V  
Sbjct: 362 NGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVT 421

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T ++D   +    D A  L EKM   GC+PN +T+ + IKG         A   L+ ++
Sbjct: 422 YTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQ 481

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G  P++  +N L+D L +M  Y++A  ++  +    L P+  T+ ++L     +G   
Sbjct: 482 GHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMG 541

Query: 378 LLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLD-KGFTPDNYSFVGL 433
              +L     V     D + YN ++  +CK G    A +L   +   K + PD  ++  L
Sbjct: 542 EALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSL 601

Query: 434 LRGLCGARKIDEAI-----NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
           + G C    I+EA+      + QGI  N    NA V     D L   G  H    + R+ 
Sbjct: 602 IWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVR-CFFDSLGHMGPIHILDDILRKG 660


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/436 (24%), Positives = 203/436 (46%), Gaps = 5/436 (1%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+  +  I + +LC LN V      +  +++ G  P+   F  L+   C  G+I EA  L
Sbjct: 78  PDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHL 137

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
              MI  G   +V  +  LI+G  + R++  A  ++ +M+  G SPN+VTY SLI G  +
Sbjct: 138 FDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCK 197

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
              +    + ++ +      PD+   N ++D L K G   +A DV D ++   + P+  T
Sbjct: 198 LCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVT 257

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
           + +L+   CL     +  K+   +   +  A+++ YN L++ +CK    ++A+ L+  M 
Sbjct: 258 YNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMS 317

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
            +  TP+  ++  L+ GLC   ++ +AI+++  +V      +   +  + D L +     
Sbjct: 318 RQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLD 377

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
           KA+ L +      +  D+  YT  + G+   G  E+A  L+S +    + PN +TY +M+
Sbjct: 378 KAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMI 437

Query: 540 LSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLI 599
              CK+  +    +L  ++       +  T   +T+   + + +   +  L EM   G  
Sbjct: 438 HGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFS 497

Query: 600 PDEMWRKL--GLLSDE 613
            D     L  G+LSD+
Sbjct: 498 VDVSTTTLLVGMLSDD 513



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 109/455 (23%), Positives = 207/455 (45%), Gaps = 13/455 (2%)

Query: 68  SFFIWCAKQRDYF---HDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLL 124
           S  +  ++Q D F    DV +   +I+ +  L  R +     + ++ ++G    A TF  
Sbjct: 62  STLLSLSRQMDSFGIPPDVYTLAIVINSLCHL-NRVDFAFSALAKILKLGHQPDATTFTT 120

Query: 125 FLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-- 182
            +R        G  L  FD+M   GF PN      +++ L K  +V     +  E     
Sbjct: 121 LIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKG 180

Query: 183 --PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAY 240
             PN +++N  +  LCKL +  +V  ++  MV     P+V     +++  CK G +AEA+
Sbjct: 181 ISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAH 240

Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
            ++ +MI  G   +V  +  L+DG      +D+A  +++ MV   C  NV++Y +LI G+
Sbjct: 241 DVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGY 300

Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
            + +    A    + +  +   P+ V +N LI  L  +G   DA+ ++  ++    +PD 
Sbjct: 301 CKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDL 360

Query: 361 YTFCSLLSTVC----LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYN 416
            T+ +L   +C    L    +LL K + G   + D+ +Y  +L   C+AG    A  L++
Sbjct: 361 VTYRTLSDYLCKNRHLDKAMALL-KAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFS 419

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
            +  KG  P+ +++  ++ GLC    + EA  ++  +  N  + N   +  I    +   
Sbjct: 420 NLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNN 479

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
              + I+L    +   + +DV + T+ +  L + G
Sbjct: 480 EALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG 514



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/378 (25%), Positives = 179/378 (47%), Gaps = 19/378 (5%)

Query: 86  FDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEM 145
           F  +++ + ++   + TV  +  ++   G      T  + +  +      G       ++
Sbjct: 584 FTKLLTSIAKMK-HYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKL 642

Query: 146 GRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNI---ALCNLCKLNDVS 202
            + GF P+      +M+ L K+  +  GI        P+  ++N    ALCNLC+   V+
Sbjct: 643 LKLGFQPDVVTYGTLMNGLCKM--ITKGIS-------PDIFTYNSLIHALCNLCEWKHVT 693

Query: 203 NVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLI 262
            +   +  MV     PNV +F  +++  CK G IA A+ ++ +MI  G    V  +T L+
Sbjct: 694 TL---LNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALM 750

Query: 263 DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
           DG      +D A  +++ MV  GC PNV +Y  LI G+ + +    A   L+ +  +G  
Sbjct: 751 DGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLI 810

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LL 379
            D V +N LI  L  +G    A+ ++  ++    +PD  T+  LL  +C +   +   +L
Sbjct: 811 ADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVL 870

Query: 380 PKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
            K + G  ++AD++VYN  +   C+AG    A  L++ +  KG  PD  ++  ++ GLC 
Sbjct: 871 LKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCK 930

Query: 440 ARKIDEAINVYQGIVMNN 457
              +DEA  +++ +  N+
Sbjct: 931 RGLLDEANKLFRKMDEND 948



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 160/357 (44%), Gaps = 16/357 (4%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+  + NI + + C L  +     V+  +++ GF P+V  +  L+N  CKM         
Sbjct: 614 PDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCKM--------- 664

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
               IT G S  +  +  LI     L        L  +MV +   PNVV +++++    +
Sbjct: 665 ----ITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCK 720

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
             M +IA   +DM+   G  PD+V +  L+D        D+A+ V+D ++    VP+  +
Sbjct: 721 EGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRS 780

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGLEVE---ADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
           +  L++  C   R      L+  + ++   AD V YN L+   C  G    A+ L++ M+
Sbjct: 781 YNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMV 840

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
             G  PD  ++  LL  LC    + EA+ + + I  +N   +  V+   +D +  AG   
Sbjct: 841 ASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELE 900

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
            A  LF     +    DV +Y + I GL + G  +EA  L+ +M    +  N+ + R
Sbjct: 901 AARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSNSTSSR 957



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 91/400 (22%), Positives = 177/400 (44%), Gaps = 16/400 (4%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+ + F   L ++ K+   S V  +   M   G  P+V    IL+N FC + R+  A+ +
Sbjct: 579 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 638

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           L  ++ LG    V  +  L++G               KM+  G SP++ TY SLI     
Sbjct: 639 LAKLLKLGFQPDVVTYGTLMNGLC-------------KMITKGISPDIFTYNSLIHALCN 685

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
              +    + L+ + +    P++V  + ++D L K G    A DV D +++  + PD  T
Sbjct: 686 LCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVT 745

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTML 419
           + +L+   CL        K+   +  +    ++  YN L++ +C+    ++A+ L   M 
Sbjct: 746 YTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMS 805

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
            +G   D  ++  L+ GLC   ++  AI ++  +V +    +   +  ++D L +     
Sbjct: 806 LQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLA 865

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
           +A+ L +         D++ Y +AI G+   G  E A  L+S +    + P+  TY +M+
Sbjct: 866 EAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMI 925

Query: 540 LSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK 579
              CK   +    +L + + +  I  +  +S      I++
Sbjct: 926 HGLCKRGLLDEANKLFRKMDENDIWSNSTSSRNQKSLIYQ 965



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/351 (23%), Positives = 156/351 (44%), Gaps = 3/351 (0%)

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M+ K   P+   F  LL    K    +    L   M + G    V    ++I+    L R
Sbjct: 36  MLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNR 95

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           +D A     K+++ G  P+  T+T+LI+G         A    D +  EG  P++V +  
Sbjct: 96  VDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGT 155

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---E 387
           LI+ L K     +A +++  ++   + P+  T+ SL+  +C    +  +  L+  +   +
Sbjct: 156 LINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSK 215

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
           +  D+   N ++   CK G   +A  + + M+ +G  P+  ++  L+ G C   ++D A+
Sbjct: 216 IMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAV 275

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            V+  +V  +   N   +  +++   +     KA+ LF     ++   + V+Y   I GL
Sbjct: 276 KVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGL 335

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
              GR ++A  L+ +M      P+  TYR +    CK R++     LL+ +
Sbjct: 336 CHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAI 386



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 101/477 (21%), Positives = 186/477 (38%), Gaps = 60/477 (12%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNL 195
           + F  +   G  PN +  NI++  L K G +    K+  E       PN  ++N+     
Sbjct: 416 DLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGF 475

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL-----------G 244
            + N+     +++  M+ +GF  +V    +L+      G      Q+L            
Sbjct: 476 LRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGT 535

Query: 245 LMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
            M +L      ++   L         LD A   + +M+     P+ V +T L+    + K
Sbjct: 536 QMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMK 595

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
            +S   S    ++S G  PD+   N+LI+    +     A  V   LL+L   PD  T+ 
Sbjct: 596 HYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYG 655

Query: 365 SLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALL------------------------- 399
           +L++ +C         K++    +  D+  YN+L+                         
Sbjct: 656 TLMNGLC---------KMITK-GISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIM 705

Query: 400 ----------SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
                        CK G    A  + + M+ +G  PD  ++  L+ G C   ++DEA+ V
Sbjct: 706 PNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKV 765

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
           +  +V      N   +  +++   +  R  KA+ L  +  ++    D V+Y   I GL  
Sbjct: 766 FDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCH 825

Query: 510 GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
            GR + A  L+ +M      P+  TYR++L   CK  ++     LL+ +  + ++ D
Sbjct: 826 VGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDAD 882



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 84/177 (47%)

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           V +N LL+   K    +  + L   M   G  PD Y+   ++  LC   ++D A +    
Sbjct: 46  VDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAK 105

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           I+      +A   T ++  L   G+  +A+ LF + I E +  +VV+Y   I GL +  +
Sbjct: 106 ILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQ 165

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
             EA+ ++S+M    + PN  TY  ++   CK    K V  L+ +++D++I  D  T
Sbjct: 166 VTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFT 222


>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g06710, mitochondrial; Flags: Precursor
 gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
          Length = 987

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 123/477 (25%), Positives = 212/477 (44%), Gaps = 35/477 (7%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVL------FKI 167
           GC    + F   +  Y     +    +   +M + G  P     NI++  +         
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNC 426

Query: 168 GRVDLGIKVLKETQLP-------NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV 220
             +DL  K   E           N  SF   LC+  K     +V   I  M+ +GF P+ 
Sbjct: 427 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSV---IREMIGQGFIPDT 483

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
             +  +LN  C   ++  A+ L   M   G    V  +T+++D F +   ++ A   + +
Sbjct: 484 STYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNE 543

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           M + GC+PNVVTYT+LI  +++AK  S A    + + SEG  P++V ++ LID   K G 
Sbjct: 544 MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 603

Query: 341 YDDALDVYDGLLELKLVPD----------------SYTFCSLLSTVCLSGRFSLLPKLVC 384
            + A  +++ +   K VPD                  T+ +LL   C S R     KL+ 
Sbjct: 604 VEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLD 663

Query: 385 GLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
            + +E    + +VY+AL+   CK G  ++A ++   M + GF    Y++  L+      +
Sbjct: 664 AMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVK 723

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYT 501
           + D A  V   ++ N+ A N  ++T ++D L + G+  +A +L +    +    +VV+YT
Sbjct: 724 RQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYT 783

Query: 502 VAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
             I G    G+ E    L  +M    V PN  TYRV++   CK   + +   LL+++
Sbjct: 784 AMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 133/649 (20%), Positives = 246/649 (37%), Gaps = 89/649 (13%)

Query: 61  PSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQ 120
           PS +I  SFF+W  +Q  Y H    ++ ++ ++ R     +     + ++      +  +
Sbjct: 145 PSAVI--SFFVWAGRQIGYKHTAPVYNALVDLIVRDDDE-KVPEEFLQQIRDDDKEVFGE 201

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET 180
              + +R + R   + + LE    +  F F P+    N ++    K  R+D    + +E 
Sbjct: 202 FLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREM 261

Query: 181 QLPNFLSFNIAL-CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEA 239
            L N       L C    L  V   ++ + ++  + F P+   +  L++  C+     EA
Sbjct: 262 SLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEA 321

Query: 240 YQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG 299
              L  M       +V  ++ L+ G    ++L     +   M+  GC P+   + SL+  
Sbjct: 322 MDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHA 381

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID-------------------------- 333
           +  +   S A+  L  +   GH P  V +N+LI                           
Sbjct: 382 YCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLA 441

Query: 334 ---------------CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR--- 375
                          CL   G Y+ A  V   ++    +PD+ T+  +L+ +C + +   
Sbjct: 442 AGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMEL 501

Query: 376 -FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
            F L  ++  G  V AD+  Y  ++  FCKAG   QA K +N M + G TP+  ++  L+
Sbjct: 502 AFLLFEEMKRGGLV-ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 560

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
                A+K+  A  +++ ++      N   ++A++D   +AG+  KA Q+F R    K  
Sbjct: 561 HAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDV 620

Query: 495 LD----------------VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            D                VV+Y   + G  +  R EEA  L   M      PN   Y  +
Sbjct: 621 PDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDAL 680

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGL 598
           +   CK   +   + +  ++ +       +T   L    FK      A   L +M     
Sbjct: 681 IDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSC 740

Query: 599 IP------------------DEMWRKLGLLSDETMTP-----VSLFDGF 624
            P                  DE ++ + ++ ++   P      ++ DGF
Sbjct: 741 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 118/521 (22%), Positives = 224/521 (42%), Gaps = 31/521 (5%)

Query: 108 GELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKI 167
            E+   G V+       F R       Y        EM   GF P+T   + V++ L   
Sbjct: 437 SEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNA 496

Query: 168 GRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMF 223
            +++L   + +E +    + +  ++ I + + CK   +   +     M   G  PNV  +
Sbjct: 497 SKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTY 556

Query: 224 EILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV- 282
             L++ + K  +++ A +L   M++ G   ++  ++ LIDG  +  +++ A  ++E+M  
Sbjct: 557 TALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCG 616

Query: 283 ---------------QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
                           N   PNVVTY +L+ GF ++     A   LD +  EG  P+ + 
Sbjct: 617 SKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIV 676

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL- 386
           ++ LID L K+G  D+A +V   + E       YT+ SL+       R  L  K++  + 
Sbjct: 677 YDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 736

Query: 387 --EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
                 ++V+Y  ++   CK G  ++A KL   M +KG  P+  ++  ++ G     KI+
Sbjct: 737 ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIE 796

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
             + + + +     A N   +  ++D   + G    A  L        +P    ++T   
Sbjct: 797 TCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWP----THTAGY 852

Query: 505 RGLLEGGRTE--EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
           R ++EG   E  E+  L  ++      P    YR+++ +  K + ++M  RLL++V    
Sbjct: 853 RKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFS 912

Query: 563 IEL-DYHTSIR-LTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
             L DY ++   L + +   +   +A     EM   G+IP+
Sbjct: 913 ATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPE 953



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 117/535 (21%), Positives = 225/535 (42%), Gaps = 76/535 (14%)

Query: 53  VHSTLLN--CPSDLIALSFFIWCAKQRD-YFHDVQSFDHMISVVTRLTGRFETVRGIVGE 109
            +S +LN  C +  + L+F ++   +R     DV ++  M+    +  G  E  R    E
Sbjct: 485 TYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCK-AGLIEQARKWFNE 543

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
           +  VGC     T+   +  Y + +      E F+ M   G  PN    + ++D   K G+
Sbjct: 544 MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 603

Query: 170 VDLGIKVLKE--------------------TQLPNFLSFNIALCNLCKLNDVSNVKDVIG 209
           V+   ++ +                     ++ PN +++   L   CK + V   + ++ 
Sbjct: 604 VEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLD 663

Query: 210 MMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLR 269
            M  +G  PN  +++ L++  CK+G++ EA ++   M   G   ++  ++ LID + +++
Sbjct: 664 AMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVK 723

Query: 270 RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHN 329
           R D+A  +  KM++N C+PNVV YT +I G  +      A+  + M+E +G  P++V + 
Sbjct: 724 RQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYT 783

Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE 389
            +ID    +G  +  L++ + +    + P                               
Sbjct: 784 AMIDGFGMIGKIETCLELLERMGSKGVAP------------------------------- 812

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            + V Y  L+ + CK G  + A  L   M    +      +  ++ G    ++  E++ +
Sbjct: 813 -NYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGL 869

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
              I  ++ A    V+  ++D LI+A R   A++L     V  +   +V Y+     L+E
Sbjct: 870 LDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEE--VATFSATLVDYSSTYNSLIE 927

Query: 510 ----GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE-----RNIKMVKRLL 555
                 + E A+ L+S+M    V P        + SFC       RN K+ + LL
Sbjct: 928 SLCLANKVETAFQLFSEMTKKGVIPE-------MQSFCSLIKGLFRNSKISEALL 975


>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 145/586 (24%), Positives = 240/586 (40%), Gaps = 83/586 (14%)

Query: 66  ALSFFIWCAKQRDYFHDVQSF-------------DHMISVVTRLTGRFETVRGIVGELA- 111
           AL FF W        H VQSF             D    V  R+ G+F  +  ++GE   
Sbjct: 72  ALRFFEWAENFLGLCHPVQSFCGIAHVLLRHRMFDPATRVFDRMVGQFGNLE-VLGEFHG 130

Query: 112 --RVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
             R      +  +   L  Y R  M    ++ F  M + G + + +A + ++D+L    R
Sbjct: 131 SFRNYGSNPSTVYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDR 190

Query: 170 VD------------LGI------KVLKETQLPNFLSFNIAL-----------CN-----L 195
           +D            LG+        LK  ++   L+F+ AL           CN     L
Sbjct: 191 IDVILENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGL 250

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
           C  N +    D   MMVR G  PN+  F  L+N +CK  R+ EA+ L  LMI  G    +
Sbjct: 251 CMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDL 310

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
             +++LI+G  R  +L+    L+   +  G   +VV ++S++  ++       A      
Sbjct: 311 VIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTR 370

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
           +  EG +P++V +++LI+ L + G   +A  V+  +L+  L P   T             
Sbjct: 371 MLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLT------------- 417

Query: 376 FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
                              Y++L+  FCK+        LY  ML KG  PD      L+ 
Sbjct: 418 -------------------YSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLIN 458

Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
           GL     +DEA+  +   V     +N ++  A++D      R    ++++    + K   
Sbjct: 459 GLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIP 518

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
           DVV+YTV ++GL E GR +EA  L+ Q+      P+   Y  ++  FCK+R+     ++ 
Sbjct: 519 DVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIF 578

Query: 556 QDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           + +    I  D      L    F+     + +  L E+   GL PD
Sbjct: 579 KLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPD 624



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 108/454 (23%), Positives = 209/454 (46%), Gaps = 7/454 (1%)

Query: 160 VMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG 215
           +MD   ++G +   I+V    LKE   PN ++++I +  LC+   V     V G ++++G
Sbjct: 351 IMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQG 410

Query: 216 FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAG 275
             P+V  +  L++ FCK   + + + L G+M+  G    V   ++LI+G  R   +D A 
Sbjct: 411 LEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEAL 470

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
             + + V+ G + N   + +LI G    K          ++      PD+V + VL+  L
Sbjct: 471 RFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGL 530

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL---LPKLVCGLEVEADL 392
           ++ G  D+AL ++  LL+    PD   +C+L+   C     +    + KL+    +  D+
Sbjct: 531 AEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDI 590

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
            +YN L++ F + G     ++L   ++  G  PD  ++  ++ G C  +   +AI +++ 
Sbjct: 591 CIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEV 650

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           +       NA   T ++D   + GR   A+ +F   +      ++++Y+  I G  +   
Sbjct: 651 LKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTEN 710

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
           TE A+ LY +M    V PN  +Y +++   CK+  ++      Q  I   +  D      
Sbjct: 711 TESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGI 770

Query: 573 LTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRK 606
           L +   K    + A+     M   G++PD++ +K
Sbjct: 771 LIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQK 804



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/360 (24%), Positives = 169/360 (46%), Gaps = 9/360 (2%)

Query: 105 GIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVL 164
           G+ G + R G V       + +    R  M    L  F +  + G T N +  N ++D  
Sbjct: 436 GLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGC 495

Query: 165 FKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV 220
           F++ R   G+K+         +P+ +++ + +  L +   +     +   +++KGF P+ 
Sbjct: 496 FRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDH 555

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
            ++  L++ FCK    A   Q+  LM + G    +  + VLI+ F R   ++    L  +
Sbjct: 556 IIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLRE 615

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           +++ G  P++VTY ++I G+   K+FS A    ++L+     P+ +   +LID   K G 
Sbjct: 616 IIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGR 675

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLS----TVCLSGRFSLLPKLVCGLEVEADLVVYN 396
            DDA+ ++  +LE    P+  T+  L+     T      F L  K++ G  V  ++V Y+
Sbjct: 676 MDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKML-GDRVSPNIVSYS 734

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            L+   CK G   +A   +   + +   PD  ++  L+RG C   ++ EA+ +Y  +++N
Sbjct: 735 ILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVN 794



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 52/234 (22%), Positives = 100/234 (42%), Gaps = 39/234 (16%)

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET----QLPNFLSFNIALCN 194
           L+ F  M   G  P+    N+++++ F+ G V+  +++L+E       P+ +++N  +C 
Sbjct: 575 LQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICG 634

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
            C L   S    +  ++      PN   F IL++ +CK GR+ +A  +   M+  G   +
Sbjct: 635 YCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPN 694

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS------------------- 295
           +  ++ LIDG+ +    + A  L+EKM+ +  SPN+V+Y+                    
Sbjct: 695 ILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQ 754

Query: 296 ----------------LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
                           LI+G+ +    + A    D +   G  PD +    L +
Sbjct: 755 CAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKALAE 808



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 62/264 (23%), Positives = 123/264 (46%), Gaps = 13/264 (4%)

Query: 51  HIVHSTLLN--CPSDLIALSFFIWCAKQRD-YFHDVQSFDHMISVVTRLTGRFETVRGIV 107
           HI++ TL++  C     A    I+   Q +  F D+  ++ +I++  R  G  E V  ++
Sbjct: 555 HIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFR-EGCVENVLELL 613

Query: 108 GELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKI 167
            E+ + G      T+   +  Y   +++   ++ F+ +      PN     I++D   K 
Sbjct: 614 REIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKD 673

Query: 168 GRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMF 223
           GR+D  +     +L+    PN L+++  +    K  +  +  ++   M+     PN+  +
Sbjct: 674 GRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSY 733

Query: 224 EILLNCFCKMGRIAEAYQLLGLMITLGTSL--SVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            IL++  CK G + EA   L     +G  L   V A+ +LI G+ ++ RL  A  L++ M
Sbjct: 734 SILIDGLCKKGLMEEAS--LAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHM 791

Query: 282 VQNGCSPNVVTYTSLIK-GFMEAK 304
           + NG  P+ +   +L + GF +++
Sbjct: 792 LVNGIMPDDLLQKALAEYGFQDSQ 815


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 108/461 (23%), Positives = 202/461 (43%), Gaps = 37/461 (8%)

Query: 83  VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF 142
           V +F  +I ++   +G FE    +  +L + GC +    + + +R + R       +E F
Sbjct: 65  VHAFTKLIDILVN-SGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMF 123

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIK----VLKETQLPNFLSFNIALCNLCKL 198
            EM   G  P+ +    +++ L K GRV         +L+    PN  ++N+ +    K+
Sbjct: 124 REMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKV 183

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
             +     +   M R+GF P+V  + ILL+  C  GR+  A +L   M   G S     +
Sbjct: 184 GQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTY 243

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
           + L++G  +  R++ A  ++ +MV  G + ++V Y SL+    +A      +  +  +  
Sbjct: 244 STLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSR 303

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL 378
           +G  PD    N ++D L K    D A +V+  ++E    PD                   
Sbjct: 304 KGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPD------------------- 344

Query: 379 LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
                        L+ YN L+  + + G   QA ++   M++ GF P+  ++  L+  L 
Sbjct: 345 -------------LISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLA 391

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
              ++DEA  V + +       +   +  ++D L + G   +A +LF++   +    D +
Sbjct: 392 TDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTL 451

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
           SY V I GL    R +EA +L+  MK +  P +   YR+++
Sbjct: 452 SYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILI 492



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 106/472 (22%), Positives = 198/472 (41%), Gaps = 34/472 (7%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G  + +  ++ E+   G  ++  T +  +  Y RG   G   + F++   F  +P   A 
Sbjct: 9   GILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAF 68

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFY 217
             ++D+L   G  +    V K+                               +V+KG  
Sbjct: 69  TKLIDILVNSGEFERAELVYKK-------------------------------LVQKGCQ 97

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
            +   + +L+  F + G++  A ++   M   G+      +  L++   +  R+  A   
Sbjct: 98  LDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSF 157

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
           ++ M++ G +PN+ TY  L+  F +     +A      ++  G  P +V +N+L+D L  
Sbjct: 158 FDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCS 217

Query: 338 MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVV 394
            G    A  ++  +      PDSYT+ +L++ +  SGR     K+   +    V  DLV 
Sbjct: 218 AGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVN 277

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           YN+LL+   KAG  ++  KL   M  KGF PD +SF  ++  L  A K D A  V+  +V
Sbjct: 278 YNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMV 337

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
            +    +   +  ++D     G   +A Q+    +   +  +  +Y   I  L   G+ +
Sbjct: 338 ESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVD 397

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           EA+ +  +M+     P+  TY  ++    K    +   RL Q + D  +E D
Sbjct: 398 EAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPD 449



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/389 (24%), Positives = 163/389 (41%), Gaps = 3/389 (0%)

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
           P V  F  L++     G    A  +   ++  G  L   A+ VLI  F R  +LD A  +
Sbjct: 63  PTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEM 122

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
           + +M   G  P+  TY  L+    +A     A SF D +   G  P++  +N+L+D   K
Sbjct: 123 FREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRK 182

Query: 338 MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVV 394
           +G  D AL ++  +      P   T+  LL  +C +GR     KL   + G     D   
Sbjct: 183 VGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYT 242

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           Y+ L++   K+G   +A K++  M+D+G   D  ++  LL  L  A  +D    + + + 
Sbjct: 243 YSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMS 302

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
                 +A     I+D L +A +   A ++F R +      D++SY + I      G   
Sbjct: 303 RKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAA 362

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLT 574
           +A  +  +M      P   TY  ++     +  +     +L+++  A    D  T  RL 
Sbjct: 363 QARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLM 422

Query: 575 KFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
             + K   +  A     +M + G+ PD +
Sbjct: 423 DMLGKRGENQRAARLFQQMKDKGVEPDTL 451



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/376 (21%), Positives = 162/376 (43%), Gaps = 32/376 (8%)

Query: 226 LLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
           L+  + +  +  +A+ L     +   S +V+A+T LID        + A  +++K+VQ G
Sbjct: 36  LITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKG 95

Query: 286 CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL 345
           C  +   Y  LI+ F  +     A      ++ +G  PD   +  L++ L K G   +A 
Sbjct: 96  CQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEAR 155

Query: 346 DVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKA 405
             +D +LE  L P+                                +  YN L+  F K 
Sbjct: 156 SFFDAMLERGLTPN--------------------------------IPTYNLLMDAFRKV 183

Query: 406 GFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVH 465
           G  + A+ L+  M  +GF P   ++  LL  LC A ++  A  ++  +  +  + +++ +
Sbjct: 184 GQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTY 243

Query: 466 TAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKH 525
           + +V+ L ++GR  +A ++FR  +     +D+V+Y   +  L + G  +  + L  +M  
Sbjct: 244 STLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSR 303

Query: 526 IAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSS 585
               P+A+++  ++ +  K       + +   ++++  + D  +   L     +F  ++ 
Sbjct: 304 KGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQ 363

Query: 586 AVNQLVEMCNLGLIPD 601
           A   L EM   G IP+
Sbjct: 364 ARQMLEEMVEAGFIPE 379



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 143/319 (44%), Gaps = 7/319 (2%)

Query: 95  RLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNT 154
           R  G+ +   G+  E+ R G      T+ + L         G   + F +M   G +P++
Sbjct: 181 RKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDS 240

Query: 155 FARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGM 210
           +  + +++ L K GRV+   KV +E        + +++N  L  L K  ++  V  ++  
Sbjct: 241 YTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKE 300

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M RKGF+P+   F  +++   K  +   A ++   M+  G    + ++ +LID + R   
Sbjct: 301 MSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGD 360

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
              A  + E+MV+ G  P   TY SLI           AF+ L+ +E+ G  PD+V +N 
Sbjct: 361 AAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNR 420

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLE 387
           L+D L K G    A  ++  + +  + PD+ ++   +  +    R     +L K +  + 
Sbjct: 421 LMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVG 480

Query: 388 VEADLVVYNALLSYFCKAG 406
              D  +Y  L+    +AG
Sbjct: 481 CPVDKAMYRILIRAAHRAG 499


>gi|357142290|ref|XP_003572522.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 669

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/441 (25%), Positives = 204/441 (46%), Gaps = 11/441 (2%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           ++E    ++ E+ R  C     TF   +R + +  +    ++  + M R+G TP+    +
Sbjct: 225 QWEKAEELMEEMIRNNCHPNEVTFATQIRSFCQNGLLDHAVQLLERMPRYGCTPDVVIYS 284

Query: 159 IVMDVLFKIGRVDLGIKVLKETQL--PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
            +++   + GRVD  + VL  T L  PN + +N AL  LC      +V ++I  MVRK  
Sbjct: 285 TLVNGFSEQGRVDDAL-VLLNTMLCKPNTVCYNAALKGLCMAERWKDVGELIAEMVRKDC 343

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
            PN   F +L +C C+ G +  A +++  M   G    V  +  LI+ F    R+D A  
Sbjct: 344 PPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLINYFSEQGRVDDALM 403

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEA-KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
           L + M+   C+P+ +++ + +K      + + +      ML  +    ++ F N+LID L
Sbjct: 404 LLDSML---CNPDTISFNAALKALCRTERWYDVEELIAQMLREDCPLIEMTF-NILIDSL 459

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVY 395
            + G  + A++V++ + + +  PD  T+ SL++     G      +L   +  + D+  Y
Sbjct: 460 CQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQGLVESAIELFQSMPCKPDIFSY 519

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
           NA+L   C+A     A +L   M  K   P+  +F  L+  LC     D AI V++ +  
Sbjct: 520 NAVLKGLCRAARWEDAGELIANMARKDCPPNEITFNILINSLCQKGFADRAIEVFKQMPE 579

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
                +   + A+++   E GR   A+ L      +    D +SY   ++GL    R +E
Sbjct: 580 YGSTPDIFTYNALINGFSEQGRLDDALNLLSTMSCKP---DAISYNSTLKGLCRAERWKE 636

Query: 516 AYILYSQMKHIAVPPNAYTYR 536
           A  + ++M     PPN  T++
Sbjct: 637 AEEIVAEMLRKKCPPNEVTFK 657



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 113/486 (23%), Positives = 212/486 (43%), Gaps = 60/486 (12%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D  S + +++   R  GR      ++ E A+V       T+   +  Y R    G + +A
Sbjct: 143 DAVSHNTLVAGYCR-DGRLADAERVL-EAAKVSGAANVVTYTALINGYCRS---GRLADA 197

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE----TQLPNFLSFNIALCNLCK 197
            + +      P+T+  N V+  L    + +   ++++E       PN ++F   + + C+
Sbjct: 198 LNLIASMPVAPDTYTYNTVLKGLCGAKQWEKAEELMEEMIRNNCHPNEVTFATQIRSFCQ 257

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              + +   ++  M R G  P+V ++  L+N F + GR+ +A  LL  M+    ++  NA
Sbjct: 258 NGLLDHAVQLLERMPRYGCTPDVVIYSTLVNGFSEQGRVDDALVLLNTMLCKPNTVCYNA 317

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
               + G     R    G L  +MV+  C PN  T++ L     +  +   A   ++ ++
Sbjct: 318 ---ALKGLCMAERWKDVGELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQ 374

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G  PD+V +N LI+  S+ G  DDAL + D +L     PD+ +F + L  +C + R+ 
Sbjct: 375 KYGCRPDVVIYNTLINYFSEQGRVDDALMLLDSML---CNPDTISFNAALKALCRTERWY 431

Query: 378 LLPKLVCG-LEVEADLV--VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
            + +L+   L  +  L+   +N L+   C+ G  N A++++  M     TPD  ++  L+
Sbjct: 432 DVEELIAQMLREDCPLIEMTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLI 491

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            G              QG+V                          AI+LF+    +   
Sbjct: 492 NGF-----------SEQGLV------------------------ESAIELFQSMPCKP-- 514

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK----ERNIKM 550
            D+ SY   ++GL    R E+A  L + M     PPN  T+ +++ S C+    +R I++
Sbjct: 515 -DIFSYNAVLKGLCRAARWEDAGELIANMARKDCPPNEITFNILINSLCQKGFADRAIEV 573

Query: 551 VKRLLQ 556
            K++ +
Sbjct: 574 FKQMPE 579



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 115/248 (46%), Gaps = 6/248 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D  SF+  +  + R T R+  V  ++ ++ R  C +   TF + +    +  +    +E 
Sbjct: 413 DTISFNAALKALCR-TERWYDVEELIAQMLREDCPLIEMTFNILIDSLCQHGLVNHAIEV 471

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-PNFLSFNIALCNLCKLND 200
           F++M ++  TP+    + +++   + G V+  I++ +     P+  S+N  L  LC+   
Sbjct: 472 FEQMPKYRCTPDIVTYSSLINGFSEQGLVESAIELFQSMPCKPDIFSYNAVLKGLCRAAR 531

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
             +  ++I  M RK   PN   F IL+N  C+ G    A ++   M   G++  +  +  
Sbjct: 532 WEDAGELIANMARKDCPPNEITFNILINSLCQKGFADRAIEVFKQMPEYGSTPDIFTYNA 591

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL-DMLESE 319
           LI+GF    RLD A  L   M    C P+ ++Y S +KG   A+ +  A   + +ML  +
Sbjct: 592 LINGFSEQGRLDDALNLLSTM---SCKPDAISYNSTLKGLCRAERWKEAEEIVAEMLRKK 648

Query: 320 GHAPDLVF 327
               ++ F
Sbjct: 649 CPPNEVTF 656



 Score = 43.9 bits (102), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 37/165 (22%), Positives = 71/165 (43%), Gaps = 5/165 (3%)

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
           ++  N L+   C       A ++ + + + G + D  S   L+ G C   ++ +A  V +
Sbjct: 110 VIACNILIKKLCAHRRLADAERVLDALKESG-SADAVSHNTLVAGYCRDGRLADAERVLE 168

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
              ++  A N   +TA+++    +GR   A+ L     V     D  +Y   ++GL    
Sbjct: 169 AAKVSG-AANVVTYTALINGYCRSGRLADALNLIASMPVAP---DTYTYNTVLKGLCGAK 224

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
           + E+A  L  +M      PN  T+   + SFC+   +    +LL+
Sbjct: 225 QWEKAEELMEEMIRNNCHPNEVTFATQIRSFCQNGLLDHAVQLLE 269


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/438 (24%), Positives = 204/438 (46%), Gaps = 20/438 (4%)

Query: 130 WRGEMYGMVLEAFDEMGRF-------------GFTPNTFARNIVMDVLFKIGRVDLG--- 173
           W    Y +V+    ++GR              G+TP+  + + V++   + G +D     
Sbjct: 244 WNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKL 303

Query: 174 IKVLKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCK 232
           I+V+K   L PN   +   +  LC++  ++  ++    M+R+G  P+  ++  L++ FCK
Sbjct: 304 IEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 363

Query: 233 MGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVT 292
            G I  A +    M +   +  V  +T +I GF ++  +  AG L+ +M   G  P+ VT
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 423

Query: 293 YTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
           +T LI G+ +A     AF   + +   G +P++V +  LID L K G  D A ++   + 
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483

Query: 353 ELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPN 409
           ++ L P+ +T+ S+++ +C SG      KLV   E   + AD V Y  L+  +CK+G  +
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 543

Query: 410 QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
           +A ++   ML KG  P   +F  L+ G C    +++   +   ++    A NA    ++V
Sbjct: 544 KAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603

Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
            +         A  +++         D  +Y   ++G  +    +EA+ L+ +MK     
Sbjct: 604 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFS 663

Query: 530 PNAYTYRVMLLSFCKERN 547
            +  TY V++  F K + 
Sbjct: 664 VSVSTYSVLIKGFLKRKK 681



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 110/504 (21%), Positives = 212/504 (42%), Gaps = 38/504 (7%)

Query: 77  RDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFL-RIYWRGEMY 135
           +D+  D + FD    V+    G     R +  ++   G V+   +  ++L R+       
Sbjct: 169 KDWGSDPRVFDVFFQVLVDF-GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKT 227

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIA 191
              +  F E    G   N  + NIV+  + ++GR+     +L   +L    P+ +S++  
Sbjct: 228 ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV 287

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           +   C+  ++  V  +I +M RKG  PN  ++  ++   C++ ++AEA +    MI  G 
Sbjct: 288 VNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 347

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
                 +T LIDGF +   +  A   + +M     +P+V+TYT++I GF +      A  
Sbjct: 348 LPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK 407

Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
               +  +G  PD V    LI+   K G   DA  V++ +++    P+            
Sbjct: 408 LFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN------------ 455

Query: 372 LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
                               +V Y  L+   CK G  + A +L + M   G  P+ +++ 
Sbjct: 456 --------------------VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYN 495

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            ++ GLC +  I+EA+ +           +   +T ++D   ++G   KA ++ +  + +
Sbjct: 496 SIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK 555

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
                +V++ V + G    G  E+   L + M    + PNA T+  ++  +C   N+K  
Sbjct: 556 GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAA 615

Query: 552 KRLLQDVIDARIELDYHTSIRLTK 575
             + +D+    +  D  T   L K
Sbjct: 616 TAIYKDMCSRGVGPDGKTYENLVK 639



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/391 (22%), Positives = 168/391 (42%), Gaps = 4/391 (1%)

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR-LRRLD 272
           K +  + R+F++        G + EA ++   M+  G  LSV++  V +    +   +  
Sbjct: 169 KDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTA 228

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A  ++ +  + G   NV +Y  +I    +      A   L ++E +G+ PD++ ++ ++
Sbjct: 229 TAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVV 288

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA-- 390
           +   + G  D    + + +    L P+SY + S++  +C   + +   +    +  +   
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348

Query: 391 -DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            D VVY  L+  FCK G    A K +  M  +  TPD  ++  ++ G C    + EA  +
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
           +  +       ++   T +++   +AG    A ++    I      +VV+YT  I GL +
Sbjct: 409 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468

Query: 510 GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
            G  + A  L  +M  I + PN +TY  ++   CK  NI+   +L+ +   A +  D  T
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528

Query: 570 SIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
              L     K      A   L EM   GL P
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQP 559



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/228 (23%), Positives = 106/228 (46%), Gaps = 4/228 (1%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNL---- 195
           E   EM + G  PN F  N +++ L K G ++  +K++ E +     +  +    L    
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
           CK  ++   ++++  M+ KG  P +  F +L+N FC  G + +  +LL  M+  G + + 
Sbjct: 537 CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 596

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
             +  L+  +     L  A  +++ M   G  P+  TY +L+KG  +A+    A+     
Sbjct: 597 TTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQE 656

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
           ++ +G +  +  ++VLI    K   + +A +V+D +    L  D   F
Sbjct: 657 MKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 7/232 (3%)

Query: 136 GMVLEAFDEMGRF---GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSF 188
           G + EA   +G F   G   +T     +MD   K G +D   ++LKE       P  ++F
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           N+ +   C    + + + ++  M+ KG  PN   F  L+  +C    +  A  +   M +
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
            G       +  L+ G  + R +  A +L+++M   G S +V TY+ LIKGF++ K F  
Sbjct: 625 RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 684

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
           A    D +  EG A D    +   D   K    D  +D  D ++E  LV + 
Sbjct: 685 AREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLVDEQ 736



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 107/235 (45%), Gaps = 3/235 (1%)

Query: 370 VCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
           VC  GR      L+  +E++    D++ Y+ +++ +C+ G  ++  KL   M  KG  P+
Sbjct: 256 VCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPN 315

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
           +Y +  ++  LC   K+ EA   +  ++      +  V+T ++D   + G    A + F 
Sbjct: 316 SYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFY 375

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
                    DV++YT  I G  + G   EA  L+ +M    + P++ T+  ++  +CK  
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAG 435

Query: 547 NIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           ++K   R+   +I A    +  T   L   + K     SA   L EM  +GL P+
Sbjct: 436 HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490


>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
 gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 465

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/383 (26%), Positives = 190/383 (49%), Gaps = 5/383 (1%)

Query: 176 VLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGR 235
           +L++   P  + FN  L +L K      V  +   M  +G  PN+    IL+NCFC++G 
Sbjct: 78  LLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGL 137

Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
           I  A+ +   ++ +G + +   +T LI G     ++  A    +K+V  G   N ++Y +
Sbjct: 138 IPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGT 197

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           LI G  +      A   L  ++ +   P++V ++ +ID + K    +DA D+Y  ++   
Sbjct: 198 LIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKG 257

Query: 356 LVPDSYTFCSLLSTVCLSGRF----SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQA 411
           + P+  T+ +L+S     G+      L  K++    ++ D+  +N L+  FCK+G  + A
Sbjct: 258 ISPNVVTYSALISGFFTVGKLKDAVDLFNKMISE-NIKPDVYTFNILVDVFCKSGKISYA 316

Query: 412 VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
           +KL + M D+G  P+  ++  +L  LC   ++D+A+ +   +       N H +T ++D 
Sbjct: 317 LKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDG 376

Query: 472 LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
           L  +G+   A  +F   +V+ Y + VV+Y V   G  + G  +EA  L S+M+     P+
Sbjct: 377 LCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPD 436

Query: 532 AYTYRVMLLSFCKERNIKMVKRL 554
           A TY ++ LS  K+    M ++L
Sbjct: 437 AKTYELIKLSLFKKGENDMAEKL 459



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/339 (24%), Positives = 160/339 (47%), Gaps = 3/339 (0%)

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
           YL +KM   G  PN+V    LI  F +  +   AFS    +   G+ P+ +    LI  L
Sbjct: 108 YLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGL 167

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG--RFSL-LPKLVCGLEVEADL 392
              G    AL+ +D L+ L    +  ++ +L+  +C  G  R +L L + V G  V+ ++
Sbjct: 168 CLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNV 227

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           V+Y+ ++   CK    N A  LY+ M+ KG +P+  ++  L+ G     K+ +A++++  
Sbjct: 228 VMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNK 287

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           ++  N   + +    +VD   ++G+   A++L         P ++V+Y+  +  L +  R
Sbjct: 288 MISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHR 347

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
            ++A  L +++K   + PN +TY +++   C    ++  + + +D++    ++   T I 
Sbjct: 348 VDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIV 407

Query: 573 LTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLS 611
           +     K      A   L +M   G IPD    +L  LS
Sbjct: 408 MFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELIKLS 446



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/331 (22%), Positives = 148/331 (44%), Gaps = 38/331 (11%)

Query: 105 GIVGELARVGCVIKAQTFLLFLR-IYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDV 163
            +  ++ ++G      TF   ++ +  +G+++   L   D++   GF  N  +   ++D 
Sbjct: 143 SVFAKILKMGYNPNTITFTTLIKGLCLKGQIH-QALNFHDKLVALGFQFNQISYGTLIDG 201

Query: 164 LFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN 219
           L K+G     + +L+        PN + ++  +  +CK   V++  D+   MV KG  PN
Sbjct: 202 LCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPN 261

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
           V  +  L++ F  +G++ +A  L   MI+      V  + +L+D F +  ++  A  L +
Sbjct: 262 VVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVD 321

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
           +M   G  PN+VTY+S++    +      A + L  L+ +G  P++  + +LID L   G
Sbjct: 322 EMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSG 381

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALL 399
             +DA ++++ L                              LV G ++   +V Y  + 
Sbjct: 382 KLEDARNIFEDL------------------------------LVKGYDIT--VVTYIVMF 409

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
             FCK G  ++A  L + M + G  PD  ++
Sbjct: 410 YGFCKKGLFDEASALLSKMEENGCIPDAKTY 440



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 122/263 (46%), Gaps = 3/263 (1%)

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNAL 398
           DDA+ +++ LL     P +  F  +L ++  S  +  +  L   +E   ++ +LV  N L
Sbjct: 69  DDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNIL 128

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           ++ FC+ G    A  ++  +L  G+ P+  +F  L++GLC   +I +A+N +  +V    
Sbjct: 129 INCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGF 188

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
             N   +  ++D L + G    A+ L RR   +    +VV Y+  I G+ +     +A+ 
Sbjct: 189 QFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFD 248

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
           LYS+M    + PN  TY  ++  F     +K    L   +I   I+ D +T   L     
Sbjct: 249 LYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFC 308

Query: 579 KFHSSSSAVNQLVEMCNLGLIPD 601
           K    S A+  + EM + G  P+
Sbjct: 309 KSGKISYALKLVDEMHDRGQPPN 331



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 85/164 (51%), Gaps = 5/164 (3%)

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET----QLPNFLSFNIALCN 194
           ++ F++M      P+ +  NI++DV  K G++   +K++ E     Q PN ++++  L  
Sbjct: 282 VDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDA 341

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           LCK + V     ++  +  +G  PN+  + IL++  C  G++ +A  +   ++  G  ++
Sbjct: 342 LCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDIT 401

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIK 298
           V  + V+  GF +    D A  L  KM +NGC P+  TY  LIK
Sbjct: 402 VVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTY-ELIK 444



 Score = 45.8 bits (107), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 50/246 (20%), Positives = 91/246 (36%), Gaps = 35/246 (14%)

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL---------------- 434
           +L+ Y++  + F      + AV L+N +L +  TP    F  +L                
Sbjct: 51  NLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLS 110

Query: 435 -----RGL--------------CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
                RG+              C    I  A +V+  I+      N    T ++  L   
Sbjct: 111 KKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLK 170

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
           G+ H+A+    + +   +  + +SY   I GL + G T  A  L  ++    V PN   Y
Sbjct: 171 GQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMY 230

Query: 536 RVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCN 595
             ++   CK++++     L  +++   I  +  T   L    F       AV+   +M +
Sbjct: 231 STIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMIS 290

Query: 596 LGLIPD 601
             + PD
Sbjct: 291 ENIKPD 296


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/474 (23%), Positives = 209/474 (44%), Gaps = 76/474 (16%)

Query: 175 KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
           ++++   LP+ + F+     + +    + V D    +   G   N+    I++NCFC+  
Sbjct: 78  EMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCC 137

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
           +   AY +LG ++ LG       +  LI G     ++  A  L ++MV+NGC P+VVTY 
Sbjct: 138 KTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYN 197

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
           S++ G   +   S+A   L  +E      D+  ++ +ID L + G  D A+ ++  +   
Sbjct: 198 SIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK 257

Query: 355 KLVPDSYTFCSLLSTVCLSGRF---SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQA 411
            +     T+ SL+  +C +G++   +LL K +   E+  +++ +N LL  F K G   +A
Sbjct: 258 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317

Query: 412 VKLYNTMLDKGFTP---------DNY--------------------------SFVGLLRG 436
            +LY  M+ +G +P         D Y                          +F  L++G
Sbjct: 318 NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 377

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV--------------------------- 469
            C  +++D+ + V++ I       NA  ++ +V                           
Sbjct: 378 YCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPD 437

Query: 470 --------DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYS 521
                   D L + G+  KA+++F      K  L +V YT  I G+ +GG+ E+A+ L+ 
Sbjct: 438 VMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFC 497

Query: 522 QMKHIAVPPNAYTYRVMLLSFCKERNI---KMVKRLLQDVIDARIELDYHTSIR 572
            +    V PN  TY VM+   CK+ ++    ++ R +++  +A  +  Y+T IR
Sbjct: 498 SLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 551



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 125/556 (22%), Positives = 246/556 (44%), Gaps = 26/556 (4%)

Query: 15  RTQILKTIISF-----KSIHQISSPKVCATTHQDFPIILAPHIVHSTLLNCPSDLIALSF 69
           RT +L TI SF     +    IS+  VC               + S +++   D  A++ 
Sbjct: 28  RTDLLCTISSFFSSCERDFSSISNGNVCFRER-----------LRSGIVDIKKD-DAIAL 75

Query: 70  FIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIY 129
           F    + R     +  F    S + R T +F  V     +L   G      T  + +  +
Sbjct: 76  FQEMIRSRP-LPSLVDFSRFFSAIAR-TKQFNLVLDFCKQLELNGIAHNIYTLNIMINCF 133

Query: 130 WRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNF 185
            R            ++ + G+ P+T   N ++  LF  G+V   +    ++++    P+ 
Sbjct: 134 CRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDV 193

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGL 245
           +++N  +  +C+  D S   D++  M  +    +V  +  +++  C+ G I  A  L   
Sbjct: 194 VTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKE 253

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           M T G   SV  +  L+ G  +  + +    L + MV     PNV+T+  L+  F++   
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 313

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
              A      + + G +P+++ +N L+D         +A ++ D ++  K  PD  TF S
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 373

Query: 366 LLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
           L+   C+  R     K+   +    + A+ V Y+ L+  FC++G    A +L+  M+  G
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433

Query: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI 482
             PD  ++  LL GLC   K+++A+ +++ +  +   +   ++T I++ + + G+   A 
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 493

Query: 483 QLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
            LF     +    +V++YTV I GL + G   EA IL  +M+     PN  TY  ++ + 
Sbjct: 494 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH 553

Query: 543 CKERNIKMVKRLLQDV 558
            ++ ++    +L++++
Sbjct: 554 LRDGDLTASAKLIEEM 569



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 103/439 (23%), Positives = 198/439 (45%), Gaps = 8/439 (1%)

Query: 79  YFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMV 138
           Y  D  +F+ +I  +  L G+      +V  +   GC     T+   +    R     + 
Sbjct: 154 YEPDTTTFNTLIKGLF-LEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 212

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCN 194
           L+   +M       + F  + ++D L + G +D  I + KE +      + +++N  +  
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           LCK    ++   ++  MV +   PNV  F +LL+ F K G++ EA +L   MIT G S +
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           +  +  L+DG+    RL  A  + + MV+N CSP++VT+TSLIKG+   K          
Sbjct: 333 IITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFR 392

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            +   G   + V +++L+    + G    A +++  ++   ++PD  T+  LL  +C +G
Sbjct: 393 NISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNG 452

Query: 375 RFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
           +     ++   L+   ++  +V+Y  ++   CK G    A  L+ ++  KG  P+  ++ 
Sbjct: 453 KLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYT 512

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            ++ GLC    + EA  + + +  +  A N   +  ++   +  G    + +L       
Sbjct: 513 VMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSC 572

Query: 492 KYPLDVVSYTVAIRGLLEG 510
            +  D  S  + I  LL G
Sbjct: 573 GFSADASSIKMVIDMLLSG 591



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 68/310 (21%), Positives = 150/310 (48%), Gaps = 5/310 (1%)

Query: 270 RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHN 329
           + D A  L+++M+++   P++V ++         K F++   F   LE  G A ++   N
Sbjct: 68  KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127

Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLVCG 385
           ++I+C  +      A  V   +++L   PD+ TF +L+  + L G+ S    L+ ++V  
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187

Query: 386 LEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
              + D+V YN++++  C++G  + A+ L   M ++    D +++  ++  LC    ID 
Sbjct: 188 -GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 246

Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
           AI++++ +       +   + ++V  L +AG+ +    L +  +  +   +V+++ V + 
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
             ++ G+ +EA  LY +M    + PN  TY  ++  +C +  +     +L  ++  +   
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366

Query: 566 DYHTSIRLTK 575
           D  T   L K
Sbjct: 367 DIVTFTSLIK 376



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/242 (22%), Positives = 107/242 (44%), Gaps = 14/242 (5%)

Query: 82  DVQSFDHMIS---VVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMV 138
           D+ +F  +I    +V R+    +  R I    ++ G V  A T+ + ++ + +     + 
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNI----SKRGLVANAVTYSILVQGFCQSGKIKLA 422

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF----LSFNIALCN 194
            E F EM   G  P+     I++D L   G+++  +++ ++ Q        + +   +  
Sbjct: 423 EELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEG 482

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           +CK   V +  ++   +  KG  PNV  + ++++  CK G ++EA  LL  M   G + +
Sbjct: 483 MCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPN 542

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
              +  LI    R   L  +  L E+M   G S +  +   +I   +  ++     SFLD
Sbjct: 543 DCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGELDK---SFLD 599

Query: 315 ML 316
           ML
Sbjct: 600 ML 601



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/263 (20%), Positives = 108/263 (41%), Gaps = 38/263 (14%)

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNAL 398
           DDA+ ++  ++  + +P    F    S +  + +F+L+      LE+     ++   N +
Sbjct: 70  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           ++ FC+      A  +   ++  G+ PD  +F  L++GL    K+ EA+           
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAV----------- 178

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
                    +VDR++E G C                 DVV+Y   + G+   G T  A  
Sbjct: 179 --------VLVDRMVENG-CQP---------------DVVTYNSIVNGICRSGDTSLALD 214

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
           L  +M+   V  + +TY  ++ S C++  I     L +++    I+    T   L + + 
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274

Query: 579 KFHSSSSAVNQLVEMCNLGLIPD 601
           K    +     L +M +  ++P+
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPN 297


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/415 (24%), Positives = 205/415 (49%), Gaps = 15/415 (3%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
           F EM +    P+    N ++  + K+ + D+ I + K+ ++     +  +FNI +   C 
Sbjct: 73  FREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCC 132

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              VS    V+G M++ G+ P+      L+N FC+  R+++A  L+  M+ +G    + A
Sbjct: 133 CFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVA 192

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  +ID   + RR++ A   ++++ + G  PNVVTYT+L+ G   +  ++ A   L  + 
Sbjct: 193 YNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMI 252

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-- 375
                P+++ ++ L+D   K G   +A ++++ ++ + + PD  T+ SL++ +CL  R  
Sbjct: 253 KRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRID 312

Query: 376 -----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
                F L+    C      D+V YN L++ FCKA      +KL+  M  +G   +  ++
Sbjct: 313 EANQMFDLMVSKGC----FPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTY 368

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             L++G      +D+A   +  +     + +   +  ++  L + G   KA+ +F     
Sbjct: 369 NTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQK 428

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
            +  LD+V+YT  I+G+ + G+ E+A+ L+  +    + P+  TY  M+   C +
Sbjct: 429 SEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTK 483



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 100/394 (25%), Positives = 190/394 (48%), Gaps = 3/394 (0%)

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           MV+   +P++  F  LL+   KM +      L   M  LG    +  + ++I+ F    +
Sbjct: 76  MVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQ 135

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           + +A  +  KM++ G  P+ VT  SL+ GF      S A S +D +   G+ PD+V +N 
Sbjct: 136 VSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNA 195

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---E 387
           +ID L K    +DALD +  +    + P+  T+ +L++ +C SGR++   +L+  +   +
Sbjct: 196 IIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRK 255

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
           +  +++ Y+ALL  F K G   +A +++  M+     PD  ++  L+ GLC   +IDEA 
Sbjct: 256 ITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEAN 315

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            ++  +V      +   +  +++   +A R    ++LFR+        + V+Y   I+G 
Sbjct: 316 QMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGF 375

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
            + G  ++A   +SQM    V P+ +TY ++L   C    ++    + +D+  + ++LD 
Sbjct: 376 FQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDI 435

Query: 568 HTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            T   + + + K      A      +   GL PD
Sbjct: 436 VTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPD 469



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 146/296 (49%), Gaps = 7/296 (2%)

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCN 194
           L+ F E+GR G  PN      +++ L   GR +   ++L    K    PN ++++  L  
Sbjct: 210 LDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDA 269

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
             K   V   K++   MVR    P++  +  L+N  C   RI EA Q+  LM++ G    
Sbjct: 270 FVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPD 329

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           V ++  LI+GF + +R++    L+ KM Q G   N VTY +LI+GF +      A  F  
Sbjct: 330 VVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFS 389

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            ++S G +PD+  +N+L+  L   G  + AL +++ + + ++  D  T+ +++  +C +G
Sbjct: 390 QMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTG 449

Query: 375 RFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           +      L C L ++    D+V Y  ++S  C  G  ++   LY  M  +G   ++
Sbjct: 450 KVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKND 505



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 84/344 (24%), Positives = 160/344 (46%), Gaps = 8/344 (2%)

Query: 267 RLR--RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
           RLR  +L  A  L+ +MV+    P++V +  L+   ++ K + +  S    +E  G   D
Sbjct: 60  RLRDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRND 119

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLP 380
           L   N++I+C         AL V   +L+L   PD  T  SL++  C   R S    L+ 
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179

Query: 381 KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
           K+V  +    D+V YNA++   CK    N A+  +  +  KG  P+  ++  L+ GLC +
Sbjct: 180 KMV-EIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNS 238

Query: 441 RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSY 500
            + ++A  + + ++      N   ++A++D  ++ G+  +A ++F   +      D+V+Y
Sbjct: 239 GRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTY 298

Query: 501 TVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
           +  I GL    R +EA  ++  M      P+  +Y  ++  FCK + ++   +L + +  
Sbjct: 299 SSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQ 358

Query: 561 ARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMW 604
             +  +  T   L +  F+      A     +M + G+ PD +W
Sbjct: 359 RGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPD-IW 401



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/325 (19%), Positives = 126/325 (38%), Gaps = 40/325 (12%)

Query: 79  YFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMV 138
           Y  D+ +++ +I  + + T R         E+ R G      T+   +        +   
Sbjct: 186 YRPDIVAYNAIIDSLCK-TRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDA 244

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE----TQLPNFLSFNIALCN 194
                +M +   TPN    + ++D   K G+V    ++ +E    +  P+ ++++  +  
Sbjct: 245 ARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLING 304

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           LC  + +     +  +MV KG +P+V  +  L+N FCK  R+ +  +L   M   G   +
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNN 364

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNV------------------------ 290
              +  LI GF ++  +D A   + +M   G SP++                        
Sbjct: 365 TVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFE 424

Query: 291 -----------VTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
                      VTYT++I+G  +      A+     L  +G  PD+V +  ++  L   G
Sbjct: 425 DMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484

Query: 340 SYDDALDVYDGLLELKLVPDSYTFC 364
              +   +Y  + +  L+ +    C
Sbjct: 485 LQHEVEALYTKMKQEGLMKNDSMLC 509



 Score = 42.0 bits (97), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 41/216 (18%), Positives = 96/216 (44%), Gaps = 11/216 (5%)

Query: 80  FHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVL 139
           F DV S++ +I+   +   R E    +  ++++ G V    T+   ++ +++        
Sbjct: 327 FPDVVSYNTLINGFCK-AKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQ 385

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP----NFLSFNIALCNL 195
           E F +M  FG +P+ +  NI++  L   G ++  + + ++ Q      + +++   +  +
Sbjct: 386 EFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGM 445

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
           CK   V +   +   +  KG  P++  +  +++  C  G   E   L   M   G  +  
Sbjct: 446 CKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGL-MKN 504

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVV 291
           ++   L DG      + ++  L +KM+  G +P+++
Sbjct: 505 DSMLCLGDG-----DITISAELIKKMLSCGYAPSLL 535


>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
 gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 666

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 130/562 (23%), Positives = 243/562 (43%), Gaps = 24/562 (4%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
           A+ FF +  + R ++  V   + +I V  R+  R +    +  ++      +   +F + 
Sbjct: 90  AIDFFDYMVRSRPFYTAVDC-NKVIGVFVRMN-RPDVAISLYRKMEIRRIPLNIYSFNIL 147

Query: 126 LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV---LKETQL 182
           ++ +         L  F ++ + GF P+    N ++  L    R+   + +   + ET  
Sbjct: 148 IKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGF 207

Query: 183 ----------------PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEIL 226
                           P  ++FN  +  LC    V     ++  MV KG + +V  +  +
Sbjct: 208 LEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTI 267

Query: 227 LNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGC 286
           +N  CKMG    A  LL  M        V  ++ +ID   +      A YL+ +M++ G 
Sbjct: 268 VNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI 327

Query: 287 SPNVVTYTSLIKGFMEAKMFSIAFSFL-DMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL 345
           +PNV TY  +I GF     +S A   L DM+E E + PD++  N LI    K G   +A 
Sbjct: 328 APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREIN-PDVLTFNALISASVKEGKLFEAE 386

Query: 346 DVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKA 405
            + D +L   + PD+ T+ S++   C   RF    K +  L    D+V +N ++  +C+A
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDD-AKHMFDLMASPDVVTFNTIIDVYCRA 445

Query: 406 GFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVH 465
              ++ ++L   +  +G   +  ++  L+ G C    ++ A +++Q ++ +    +    
Sbjct: 446 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITC 505

Query: 466 TAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKH 525
             ++    E  +  +A++LF    + K  LD V+Y + I G+ +G + +EA+ L+  +  
Sbjct: 506 NILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPI 565

Query: 526 IAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSS 585
             V P+  TY VM+  FC +  I     L   + D   E D  T   L +   K      
Sbjct: 566 HGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDK 625

Query: 586 AVNQLVEMCNLGLIPDEMWRKL 607
           ++  + EM + G   D    K+
Sbjct: 626 SIELISEMRSNGFSGDAFTIKM 647



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 90/347 (25%), Positives = 159/347 (45%), Gaps = 12/347 (3%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK---ETQL-PNFLSFNIALCNLCK 197
           F EM   G  PN F  N ++D     GR     ++L+   E ++ P+ L+FN  +    K
Sbjct: 319 FSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVK 378

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              +   + +   M+ +  +P+   +  ++  FCK  R  +A  +  LM     S  V  
Sbjct: 379 EGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVT 434

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  +ID + R +R+D    L  ++ + G   N  TY +LI GF E    + A      + 
Sbjct: 435 FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 494

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
           S G  PD +  N+L+    +    ++AL++++ +   K+  D+  +  ++  +C   +  
Sbjct: 495 SHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVD 554

Query: 378 LLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
               L C L    VE D+  YN ++S FC     + A  L++ M D G  PDN ++  L+
Sbjct: 555 EAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 614

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
           RG   A +ID++I +   +  N  + +A     + D LI  GR  K+
Sbjct: 615 RGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD-LITDGRLDKS 660



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 102/435 (23%), Positives = 194/435 (44%), Gaps = 29/435 (6%)

Query: 134 MYGMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL---KETQL-PNFL 186
           + G VLEA    ++M   G   +      +++ + K+G     + +L   +ET + P+ +
Sbjct: 238 LEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVV 297

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
            ++  +  LCK    S+ + +   M+ KG  PNV  +  +++ FC  GR ++A +LL  M
Sbjct: 298 IYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDM 357

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
           I    +  V  +  LI    +  +L  A  L ++M+     P+ VTY S+I GF +   F
Sbjct: 358 IEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRF 417

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
             A    D++ S    PD+V  N +ID   +    D+ + +   +    LV ++ T+ +L
Sbjct: 418 DDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 473

Query: 367 LSTVC----LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
           +   C    L+    L  +++    V  D +  N LL  FC+     +A++L+  +    
Sbjct: 474 IHGFCEVDNLNAAQDLFQEMI-SHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 532

Query: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI 482
              D  ++  ++ G+C   K+DEA +++  + ++    +   +  ++           A 
Sbjct: 533 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN 592

Query: 483 QLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
            LF +     +  D  +Y   IRG L+ G  +++  L S+M+      +A+T        
Sbjct: 593 VLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT-------- 644

Query: 543 CKERNIKMVKRLLQD 557
                IKMV  L+ D
Sbjct: 645 -----IKMVADLITD 654



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 96/378 (25%), Positives = 159/378 (42%), Gaps = 30/378 (7%)

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           L  G    + LD A   ++ MV++      V    +I  F+      +A S    +E   
Sbjct: 77  LKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRR 136

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
              ++   N+LI C         +L  +  L +L   PD  TF +LL  +CL  R S   
Sbjct: 137 IPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRIS--- 193

Query: 381 KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
                   EA      AL  Y  + GF  +AV L++ M++ G TP   +F  L+ GLC  
Sbjct: 194 --------EA-----LALFGYMVETGFL-EAVALFDQMVEIGLTPVVITFNTLINGLCLE 239

Query: 441 RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSY 500
            ++ EA  +   +V     ++   +  IV+ + + G    A+ L  +        DVV Y
Sbjct: 240 GRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIY 299

Query: 501 TVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
           +  I  L + G   +A  L+S+M    + PN +TY  M+  FC        +RLL+D+I+
Sbjct: 300 SAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE 359

Query: 561 ARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTPVSL 620
             I  D          +  F++  SA  +  ++     + DEM  +   +  +T+T  S+
Sbjct: 360 REINPD----------VLTFNALISASVKEGKLFEAEKLCDEMLHR--CIFPDTVTYNSM 407

Query: 621 FDGFVPCERRAGNANHLL 638
             GF     R  +A H+ 
Sbjct: 408 IYGFCK-HNRFDDAKHMF 424


>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 133/598 (22%), Positives = 240/598 (40%), Gaps = 60/598 (10%)

Query: 45  PIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVV--TRLTGRFET 102
           P  L+P  V   L +  +   ALS F    +   Y H    F H++  +   +L      
Sbjct: 5   PKSLSPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAH--- 61

Query: 103 VRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGR-FGFTPNTFARNIVM 161
           V  IV  +    C       L  ++ Y +  M    L+ F  M   FG  P   + N ++
Sbjct: 62  VSRIVELIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLL 121

Query: 162 DVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFY 217
           + L +  + D         +     PN  ++NI +   C+       K+++  M  +GF 
Sbjct: 122 NALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFS 181

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
           P+V  +  L+N   K G +++A +L   M   G +  V  + +LIDGF +   +  A  +
Sbjct: 182 PDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEI 241

Query: 278 WEKMVQN-GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           WE++++     PN+ +Y  +I G  +   F  +F     ++      DL  ++ LI  L 
Sbjct: 242 WERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLC 301

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR--------------------- 375
             G+ D A  VY  + E  + PD   + ++L+    +GR                     
Sbjct: 302 GSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVS 361

Query: 376 --------------------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLY 415
                               + LLP+  C     AD + Y  L+   CK G+ N+A+ + 
Sbjct: 362 YNILIRGLFENAKVDEAISIWELLPEKDCC----ADSMTYGVLVHGLCKNGYLNKALSIL 417

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
               +     D +++  ++ GLC   ++DE   V   +  +    N HV  A+++  + A
Sbjct: 418 EEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRA 477

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
            +   A++ F   + +     VV+Y   I GL +  R  EAY L  +M H    PN  TY
Sbjct: 478 SKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITY 537

Query: 536 RVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEM 593
            +++   C+ + + M   L    ++   + D    +++   I     SS  V   +++
Sbjct: 538 SLLMNGLCQGKKLDMALNLWCQALEKGFKPD----VKMHNIIIHGLCSSGKVEDALQL 591



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/523 (21%), Positives = 236/523 (45%), Gaps = 47/523 (8%)

Query: 83  VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF 142
           ++S++ +++ +   + +++           +G     QT+ + ++I  R + +    E  
Sbjct: 114 IRSYNSLLNALIE-SNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELL 172

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKL 198
           + M   GF+P+ F+   +++ L K G +   +K+  E       P+   +NI +    K 
Sbjct: 173 NWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKK 232

Query: 199 NDVSNVKDVIGMMVR-KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            D+ N  ++   +++    YPN+  + +++N  CK G+  E++++   M        +  
Sbjct: 233 GDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYT 292

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           ++ LI G      LD A  ++++M +NG SP+VV Y +++ G++ A           ++E
Sbjct: 293 YSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVME 352

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG--- 374
            EG    +V +N+LI  L +    D+A+ +++ L E     DS T+  L+  +C +G   
Sbjct: 353 KEG-CRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLN 411

Query: 375 -RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGF-----------------PN------- 409
              S+L +   G   + D   Y+++++  C+ G                  PN       
Sbjct: 412 KALSILEEAENG-RGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAV 470

Query: 410 -----------QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
                       A++ +  M+ KG  P   ++  L+ GL  A +  EA  + + ++    
Sbjct: 471 INGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGW 530

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
             N   ++ +++ L +  +   A+ L+ +A+ + +  DV  + + I GL   G+ E+A  
Sbjct: 531 KPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQ 590

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
           LYS+MK     PN  T+  ++  F K R+ +   ++   ++ +
Sbjct: 591 LYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQS 633



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 105/495 (21%), Positives = 209/495 (42%), Gaps = 45/495 (9%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           ++Q+++ +I +  R   +F+  + ++  +   G      ++   +    +       L+ 
Sbjct: 148 NLQTYNILIKISCR-KKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKL 206

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQL-PNFLSFNIALCNLC 196
           FDEM   G TP+    NI++D  FK G +    ++  ++LK   + PN  S+N+ +  LC
Sbjct: 207 FDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLC 266

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
           K        ++   M +     ++  +  L++  C  G +  A ++   M   G S  V 
Sbjct: 267 KCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVV 326

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
            +  +++G+ R  R++    LW+ M + GC   VV+Y  LI+G  E      A S  ++L
Sbjct: 327 VYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELL 385

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
             +    D + + VL+  L K G  + AL + +     +   D++ + S+++ +C  GR 
Sbjct: 386 PEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRL 445

Query: 377 SLLPKL--------------VCGLEVEA------------------------DLVVYNAL 398
             +  +              VC   +                           +V YN L
Sbjct: 446 DEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTL 505

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           ++   KA   ++A  L   ML KG+ P+  ++  L+ GLC  +K+D A+N++   +    
Sbjct: 506 INGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGF 565

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
             +  +H  I+  L  +G+   A+QL+      K   ++V++   + G  +    E A  
Sbjct: 566 KPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASK 625

Query: 519 LYSQMKHIAVPPNAY 533
           ++  +       N Y
Sbjct: 626 IWDHILQSWSSSNCY 640



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/393 (22%), Positives = 176/393 (44%), Gaps = 12/393 (3%)

Query: 44  FPIILAPHIVHSTLLNCPSDLIALSFFIWC-AKQRDYFHDVQSFDHMISVVTRLTGRFET 102
           +P I + +++ + L  C       SF IW   K+ +   D+ ++  +I  +   +G  + 
Sbjct: 252 YPNIPSYNVMINGLCKCGK--FDESFEIWHRMKKNERGQDLYTYSTLIHGLCG-SGNLDG 308

Query: 103 VRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMD 162
              +  E+A  G       +   L  Y R       LE +  M + G      + NI++ 
Sbjct: 309 ATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG-CRTVVSYNILIR 367

Query: 163 VLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYP 218
            LF+  +VD  I + +    +    + +++ + +  LCK   ++    ++          
Sbjct: 368 GLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDL 427

Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
           +   +  ++N  C+ GR+ E   +L  M   G   + +    +I+GF R  +L+ A   +
Sbjct: 428 DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFF 487

Query: 279 EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
             MV  GC P VVTY +LI G  +A+ FS A++ +  +  +G  P+++ +++L++ L + 
Sbjct: 488 GNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQG 547

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE---ADLVVY 395
              D AL+++   LE    PD      ++  +C SG+     +L   ++      +LV +
Sbjct: 548 KKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTH 607

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
           N L+  F K     +A K+++ +L    + + Y
Sbjct: 608 NTLMEGFYKVRDFERASKIWDHILQSWSSSNCY 640



 Score = 41.6 bits (96), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 38/197 (19%), Positives = 81/197 (41%), Gaps = 4/197 (2%)

Query: 408 PNQAVKLYNTMLD-KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
           P+ A+ +++++    G++   Y F  +L+ L   + +     + + I          V  
Sbjct: 23  PHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQKCKCPEDVAL 82

Query: 467 AIVDRLIEAGRCHKAIQLFRR--AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
            ++    +     +A+ +F+R   I    P  + SY   +  L+E  + +EA   +   +
Sbjct: 83  TVIKAYAKNSMPDQALDIFQRMHEIFGCQP-GIRSYNSLLNALIESNKWDEAESFFLYFE 141

Query: 525 HIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSS 584
            + + PN  TY +++   C+++     K LL  + +     D  +   L   + K    S
Sbjct: 142 TMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMS 201

Query: 585 SAVNQLVEMCNLGLIPD 601
            A+    EM   G+ PD
Sbjct: 202 DALKLFDEMPERGVTPD 218


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/474 (23%), Positives = 209/474 (44%), Gaps = 76/474 (16%)

Query: 175 KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
           ++++   LP+ + F+     + +    + V D    +   G   N+    I++NCFC+  
Sbjct: 78  EMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCC 137

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
           +   AY +LG ++ LG       +  LI G     ++  A  L ++MV+NGC P+VVTY 
Sbjct: 138 KTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYN 197

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
           S++ G   +   S+A   L  +E      D+  ++ +ID L + G  D A+ ++  +   
Sbjct: 198 SIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK 257

Query: 355 KLVPDSYTFCSLLSTVCLSGRF---SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQA 411
            +     T+ SL+  +C +G++   +LL K +   E+  +++ +N LL  F K G   +A
Sbjct: 258 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317

Query: 412 VKLYNTMLDKGFTP---------DNY--------------------------SFVGLLRG 436
            +LY  M+ +G +P         D Y                          +F  L++G
Sbjct: 318 NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 377

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV--------------------------- 469
            C  +++D+ + V++ I       NA  ++ +V                           
Sbjct: 378 YCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPD 437

Query: 470 --------DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYS 521
                   D L + G+  KA+++F      K  L +V YT  I G+ +GG+ E+A+ L+ 
Sbjct: 438 VMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFC 497

Query: 522 QMKHIAVPPNAYTYRVMLLSFCKERNI---KMVKRLLQDVIDARIELDYHTSIR 572
            +    V PN  TY VM+   CK+ ++    ++ R +++  +A  +  Y+T IR
Sbjct: 498 SLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 551



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 125/556 (22%), Positives = 245/556 (44%), Gaps = 26/556 (4%)

Query: 15  RTQILKTIISF-----KSIHQISSPKVCATTHQDFPIILAPHIVHSTLLNCPSDLIALSF 69
           RT +L TI SF     +    IS+  VC               + S +++   D  A++ 
Sbjct: 28  RTDLLCTISSFFSSCERDFSSISNGNVCFRER-----------LRSGIVDIKKD-DAIAL 75

Query: 70  FIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIY 129
           F    + R     +  F    S + R T +F  V     +L   G      T  + +  +
Sbjct: 76  FQEMIRSRP-LPSLVDFSRFFSAIAR-TKQFNLVLDFCKQLELNGIAHNIYTLNIMINCF 133

Query: 130 WRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNF 185
            R            ++ + G+ P+T   N ++  LF  G+V   +    ++++    P+ 
Sbjct: 134 CRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDV 193

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGL 245
           +++N  +  +C+  D S   D++  M  +    +V  +  +++  C+ G I  A  L   
Sbjct: 194 VTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKE 253

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           M T G   SV  +  L+ G  +  + +    L + MV     PNV+T+  L+  F++   
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 313

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
              A      + + G +P+++ +N L+D         +A ++ D ++  K  PD  TF S
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 373

Query: 366 LLSTVCLSGRFSLLPKLVCGLEVE---ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
           L+   C+  R     K+   +      A+ V Y+ L+  FC++G    A +L+  M+  G
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433

Query: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI 482
             PD  ++  LL GLC   K+++A+ +++ +  +   +   ++T I++ + + G+   A 
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 493

Query: 483 QLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
            LF     +    +V++YTV I GL + G   EA IL  +M+     PN  TY  ++ + 
Sbjct: 494 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH 553

Query: 543 CKERNIKMVKRLLQDV 558
            ++ ++    +L++++
Sbjct: 554 LRDGDLTASAKLIEEM 569



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 120/514 (23%), Positives = 218/514 (42%), Gaps = 54/514 (10%)

Query: 79  YFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMV 138
           Y  D  +F+ +I  +  L G+      +V  +   GC     T+   +    R     + 
Sbjct: 154 YEPDTTTFNTLIKGLF-LEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 212

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCN 194
           L+   +M       + F  + ++D L + G +D  I + KE +      + +++N  +  
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           LCK    ++   ++  MV +   PNV  F +LL+ F K G++ EA +L   MIT G S +
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           +  +  L+DG+    RL  A  + + MV+N CSP++VT+TSLIKG+              
Sbjct: 333 IITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGY-------------- 378

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
                              C+ K    DD + V+  + +  LV ++ T+  L+   C SG
Sbjct: 379 -------------------CMVK--RVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSG 417

Query: 375 RFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
           +  L  +L   +    V  D++ Y  LL   C  G   +A++++  +           + 
Sbjct: 418 KIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYT 477

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            ++ G+C   K+++A N++  +       N   +T ++  L + G   +A  L R+   +
Sbjct: 478 TIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEED 537

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV---MLLSFCKERNI 548
               +  +Y   IR  L  G    +  L  +MK      +A + ++   MLLS  K   +
Sbjct: 538 GNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTL 597

Query: 549 KMV----KRLLQDVIDARIELDYHTSIRLTKFIF 578
           +       +  QD+    +EL     IRL+   F
Sbjct: 598 RYCLSKGSKSRQDL----LELSGSEKIRLSSLTF 627



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 68/308 (22%), Positives = 149/308 (48%), Gaps = 5/308 (1%)

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           D A  L+++M+++   P++V ++         K F++   F   LE  G A ++   N++
Sbjct: 70  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLVCGLE 387
           I+C  +      A  V   +++L   PD+ TF +L+  + L G+ S    L+ ++V    
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN-G 188

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
            + D+V YN++++  C++G  + A+ L   M ++    D +++  ++  LC    ID AI
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
           ++++ +       +   + ++V  L +AG+ +    L +  +  +   +V+++ V +   
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
           ++ G+ +EA  LY +M    + PN  TY  ++  +C +  +     +L  ++  +   D 
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 368

Query: 568 HTSIRLTK 575
            T   L K
Sbjct: 369 VTFTSLIK 376



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/263 (20%), Positives = 108/263 (41%), Gaps = 38/263 (14%)

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNAL 398
           DDA+ ++  ++  + +P    F    S +  + +F+L+      LE+     ++   N +
Sbjct: 70  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           ++ FC+      A  +   ++  G+ PD  +F  L++GL    K+ EA+           
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAV----------- 178

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
                    +VDR++E G C                 DVV+Y   + G+   G T  A  
Sbjct: 179 --------VLVDRMVENG-CQP---------------DVVTYNSIVNGICRSGDTSLALD 214

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
           L  +M+   V  + +TY  ++ S C++  I     L +++    I+    T   L + + 
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274

Query: 579 KFHSSSSAVNQLVEMCNLGLIPD 601
           K    +     L +M +  ++P+
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPN 297


>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 121/561 (21%), Positives = 252/561 (44%), Gaps = 45/561 (8%)

Query: 83  VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF 142
           ++S++ +++ +   + +++           +G     QT+ + ++I  R + +    E  
Sbjct: 114 IRSYNSLLNALIE-SNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELL 172

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKL 198
           + M   GF+P+ F+   +++ L K G +   +K+  E       P+   +NI +    K 
Sbjct: 173 NWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKK 232

Query: 199 NDVSNVKDVIGMMVR-KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            D+ N  ++   +++    YPN+  + +++N  CK G+  E++++   M        +  
Sbjct: 233 GDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYT 292

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           ++ LI G      LD A  ++++M +NG SP+VV Y +++ G++ A           ++E
Sbjct: 293 YSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVME 352

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG--- 374
            EG    +V +N+LI  L +    D+A+ +++ L E     DS T+  L+  +C +G   
Sbjct: 353 KEG-CRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLN 411

Query: 375 -RFSLLPK---------------LVCGLEVEADLV-------------------VYNALL 399
              S+L +               ++ GL  E  L                    V NA++
Sbjct: 412 KALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVI 471

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
           + F +A     A++ +  M+ KG  P   ++  L+ GL  A +  EA  + + ++     
Sbjct: 472 NGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWK 531

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            N   ++ +++ L +  +   A+ L+ +A+ + +  DV  + + I GL   G+ E+A  L
Sbjct: 532 PNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQL 591

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK 579
           YS+MK     PN  T+  ++  F K R+ +   ++   ++    + D  +     K +  
Sbjct: 592 YSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCS 651

Query: 580 FHSSSSAVNQLVEMCNLGLIP 600
            H  S AV  L +  + G++P
Sbjct: 652 CHRISDAVGFLNDAVDRGVLP 672



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 133/598 (22%), Positives = 240/598 (40%), Gaps = 60/598 (10%)

Query: 45  PIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVV--TRLTGRFET 102
           P  L+P  V   L +  +   ALS F    +   Y H    F H++  +   +L      
Sbjct: 5   PKSLSPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAH--- 61

Query: 103 VRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGR-FGFTPNTFARNIVM 161
           V  IV  +    C       L  ++ Y +  M    L+ F  M   FG  P   + N ++
Sbjct: 62  VSRIVELIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLL 121

Query: 162 DVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFY 217
           + L +  + D         +     PN  ++NI +   C+       K+++  M  +GF 
Sbjct: 122 NALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFS 181

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
           P+V  +  L+N   K G +++A +L   M   G +  V  + +LIDGF +   +  A  +
Sbjct: 182 PDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEI 241

Query: 278 WEKMVQN-GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           WE++++     PN+ +Y  +I G  +   F  +F     ++      DL  ++ LI  L 
Sbjct: 242 WERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLC 301

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR--------------------- 375
             G+ D A  VY  + E  + PD   + ++L+    +GR                     
Sbjct: 302 GSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVS 361

Query: 376 --------------------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLY 415
                               + LLP+  C     AD + Y  L+   CK G+ N+A+ + 
Sbjct: 362 YNILIRGLFENAKVDEAISIWELLPEKDCC----ADSMTYGVLVHGLCKNGYLNKALSIL 417

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
               +     D +++  ++ GLC   ++DE   V   +  +    N HV  A+++  + A
Sbjct: 418 EEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRA 477

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
            +   A++ F   + +     VV+Y   I GL +  R  EAY L  +M H    PN  TY
Sbjct: 478 SKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITY 537

Query: 536 RVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEM 593
            +++   C+ + + M   L    ++   + D    +++   I     SS  V   +++
Sbjct: 538 SLLMNGLCQGKKLDMALNLWCQALEKGFKPD----VKMHNIIIHGLCSSGKVEDALQL 591



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 114/536 (21%), Positives = 221/536 (41%), Gaps = 80/536 (14%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           ++Q+++ +I +  R   +F+  + ++  +   G      ++   +    +       L+ 
Sbjct: 148 NLQTYNILIKISCR-KKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKL 206

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQL-PNFLSFNIALCNLC 196
           FDEM   G TP+    NI++D  FK G +    ++  ++LK   + PN  S+N+ +  LC
Sbjct: 207 FDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLC 266

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
           K        ++   M +     ++  +  L++  C  G +  A ++   M   G S  V 
Sbjct: 267 KCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVV 326

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
            +  +++G+ R  R++    LW+ M + GC   VV+Y  LI+G  E      A S  ++L
Sbjct: 327 VYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELL 385

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
             +    D + + VL+  L K G  + AL + +     +   D++ + S+++ +C  GR 
Sbjct: 386 PEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRL 445

Query: 377 SLLPKL--------------VCGLEVEA------------------------DLVVYNAL 398
             +  +              VC   +                           +V YN L
Sbjct: 446 DEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTL 505

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           ++   KA   ++A  L   ML KG+ P+  ++  L+ GLC  +K+D A+N++   +    
Sbjct: 506 INGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGF 565

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQL----------------------------FRRA-- 488
             +  +H  I+  L  +G+   A+QL                            F RA  
Sbjct: 566 KPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASK 625

Query: 489 ----IVEKYPL-DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
               I++  P  D++SY + ++GL    R  +A    +      V P A T+ +++
Sbjct: 626 IWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILV 681



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 92/388 (23%), Positives = 178/388 (45%), Gaps = 10/388 (2%)

Query: 68  SFFIWC-AKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFL 126
           SF IW   K+ +   D+ ++  +I  +   +G  +    +  E+A  G       +   L
Sbjct: 274 SFEIWHRMKKNERGQDLYTYSTLIHGLCG-SGNLDGATRVYKEMAENGVSPDVVVYNTML 332

Query: 127 RIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQL 182
             Y R       LE +  M + G      + NI++  LF+  +VD  I + +    +   
Sbjct: 333 NGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCC 391

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
            + +++ + +  LCK   ++    ++          +   +  ++N  C+ GR+ E   +
Sbjct: 392 ADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGV 451

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           L  M   G   + +    +I+GF R  +L+ A   +  MV  GC P VVTY +LI G  +
Sbjct: 452 LDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSK 511

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
           A+ FS A++ +  +  +G  P+++ +++L++ L +    D AL+++   LE    PD   
Sbjct: 512 AERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKM 571

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGLEVE---ADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
              ++  +C SG+     +L   ++      +LV +N L+  F K     +A K+++ +L
Sbjct: 572 HNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHIL 631

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAI 447
             G  PD  S+   L+GLC   +I +A+
Sbjct: 632 QYGPQPDIISYNITLKGLCSCHRISDAV 659



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/263 (22%), Positives = 118/263 (44%), Gaps = 5/263 (1%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D  ++  MI+ + R  GR + V G++ ++ + GC          +  + R       L  
Sbjct: 428 DTFAYSSMINGLCR-EGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRF 486

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET----QLPNFLSFNIALCNLCK 197
           F  M   G  P     N +++ L K  R      ++KE       PN +++++ +  LC+
Sbjct: 487 FGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQ 546

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              +    ++    + KGF P+V+M  I+++  C  G++ +A QL   M       ++  
Sbjct: 547 GKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVT 606

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
              L++GF ++R  + A  +W+ ++Q G  P++++Y   +KG       S A  FL+   
Sbjct: 607 HNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAV 666

Query: 318 SEGHAPDLVFHNVLIDCLSKMGS 340
             G  P  +  N+L+  +   G+
Sbjct: 667 DRGVLPTAITWNILVRAVLDNGA 689



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 54/244 (22%), Positives = 114/244 (46%), Gaps = 4/244 (1%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIK----VLKETQLPNFLSFNIALC 193
           V    D+M + G  PN    N V++   +  +++  ++    ++ +   P  +++N  + 
Sbjct: 448 VAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLIN 507

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
            L K    S    ++  M+ KG+ PN+  + +L+N  C+  ++  A  L    +  G   
Sbjct: 508 GLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKP 567

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
            V    ++I G     +++ A  L+ +M Q  C PN+VT+ +L++GF + + F  A    
Sbjct: 568 DVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIW 627

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           D +   G  PD++ +N+ +  L       DA+   +  ++  ++P + T+  L+  V  +
Sbjct: 628 DHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDN 687

Query: 374 GRFS 377
           G  +
Sbjct: 688 GALT 691



 Score = 41.2 bits (95), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 38/197 (19%), Positives = 81/197 (41%), Gaps = 4/197 (2%)

Query: 408 PNQAVKLYNTMLD-KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
           P+ A+ +++++    G++   Y F  +L+ L   + +     + + I          V  
Sbjct: 23  PHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQKCKCPEDVAL 82

Query: 467 AIVDRLIEAGRCHKAIQLFRR--AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
            ++    +     +A+ +F+R   I    P  + SY   +  L+E  + +EA   +   +
Sbjct: 83  TVIKAYAKNSMPDQALDIFQRMHEIFGCQP-GIRSYNSLLNALIESNKWDEAESFFLYFE 141

Query: 525 HIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSS 584
            + + PN  TY +++   C+++     K LL  + +     D  +   L   + K    S
Sbjct: 142 TMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMS 201

Query: 585 SAVNQLVEMCNLGLIPD 601
            A+    EM   G+ PD
Sbjct: 202 DALKLFDEMPERGVTPD 218


>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
 gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 203/444 (45%), Gaps = 7/444 (1%)

Query: 122 FLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVL 177
           F   +  + +G      ++ F +M   G  PN    N V+D L   GR D       K++
Sbjct: 263 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV 322

Query: 178 KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIA 237
           +    P  ++++I +  L +   + +   V+  M +KGF PNV ++  L++ F + G + 
Sbjct: 323 ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLN 382

Query: 238 EAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLI 297
           +A ++  LM++ G SL+ + +  LI G+ +  + D A  L ++M+  G + N  ++TS+I
Sbjct: 383 KAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 442

Query: 298 KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
                  MF  A  F+  +     +P       LI  L K G +  AL+++   L    V
Sbjct: 443 CLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFV 502

Query: 358 PDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKL 414
            D+ T  +LL  +C +G+      + K + G     D V YN L+S  C     ++A   
Sbjct: 503 VDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMF 562

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
            + M+ +G  PDNY++  L+ GL    K++EAI  +     N    + + ++ ++D   +
Sbjct: 563 LDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCK 622

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
           A R  +  + F   + +    + V Y   IR     GR   A  L   MKH  + PN+ T
Sbjct: 623 AERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSAT 682

Query: 535 YRVMLLSFCKERNIKMVKRLLQDV 558
           Y  ++        ++  K L +++
Sbjct: 683 YTSLIKGMSIISRVEEAKLLFEEM 706



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 106/421 (25%), Positives = 189/421 (44%), Gaps = 39/421 (9%)

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
            P+  + NI L +L + N+     +   + V KG  P+V +F   +N FCK G++ EA +
Sbjct: 223 FPSKTTCNILLTSLVRANEFQKCCEAFDV-VCKGVSPDVYLFTTAINAFCKGGKVEEAVK 281

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           L   M   G + +V  +  +IDG     R D A    EKMV+ G  P ++TY+ L+KG  
Sbjct: 282 LFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLT 341

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
            AK    A+  L  +  +G  P+++ +N LID   + GS + A+++ D ++   L   S 
Sbjct: 342 RAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSS 401

Query: 362 TFCSLLSTVCLSGR----------------------FSLLPKLVC-------GLEVEADL 392
           T+ +L+   C +G+                      F+ +  L+C        L    ++
Sbjct: 402 TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEM 461

Query: 393 VVYN---------ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
           ++ N          L+S  CK G  ++A++L+   L+KGF  D  +   LL GLC A K+
Sbjct: 462 LLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKL 521

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           DEA  + + I+     ++   +  ++       +  +A       +      D  +Y++ 
Sbjct: 522 DEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSIL 581

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           I GL    + EEA   +   K   + P+ YTY VM+   CK    +  +    +++   +
Sbjct: 582 ICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNV 641

Query: 564 E 564
           +
Sbjct: 642 Q 642



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 101/418 (24%), Positives = 193/418 (46%), Gaps = 7/418 (1%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFL----SFNIALC 193
            +E  D M   G +  +   N ++    K G+ D   ++LKE     F     SF   +C
Sbjct: 384 AIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVIC 443

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
            LC      +    +G M+ +   P   +   L++  CK G+ ++A +L    +  G  +
Sbjct: 444 LLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVV 503

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
                  L+ G     +LD A  + ++++  GC  + V+Y +LI G    K    AF FL
Sbjct: 504 DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 563

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           D +   G  PD   +++LI  L  M   ++A+  +D      ++PD YT+  ++   C +
Sbjct: 564 DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA 623

Query: 374 GRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
            R     +    +    V+ + VVYN L+  +C++G  + A++L   M  KG +P++ ++
Sbjct: 624 ERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATY 683

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             L++G+    +++EA  +++ + M     N   +TA++D   + G+  K   L R    
Sbjct: 684 TSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHS 743

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
           +    + ++YTV I G    G   EA  L ++M+   + P++ TY+  +  + K+  +
Sbjct: 744 KNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGV 801


>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Brachypodium distachyon]
          Length = 628

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 126/504 (25%), Positives = 227/504 (45%), Gaps = 40/504 (7%)

Query: 65  IALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVG-CVIKAQTFL 123
           + + FF W AK+R+Y HD  ++  +I  +  +  ++  +  ++ E+ R   CV+      
Sbjct: 101 VKMQFFRWAAKKRNYEHDTSTYMALIRCL-EVVEQYGEMWKMIQEMVRNPVCVVTPMELS 159

Query: 124 LFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP 183
             +R+    +M    +  F ++      P   A N ++ +L   G+ +      K  +L 
Sbjct: 160 DIIRMLGNAKMISKAVAIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYE------KVHELY 213

Query: 184 NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
           N +S N   C                       +P+   +  L++ FCK+GR   A +LL
Sbjct: 214 NEMS-NEGHC-----------------------FPDTVTYSALISAFCKLGRQDSAIRLL 249

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
             M   G   +   +T+LI  F +L  +  A  L+E+M    C P+V TYT LI+G  +A
Sbjct: 250 NEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKA 309

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
             F  A++F   +  EG  PD V  N +I+ L K G  DDA+ +++ +  L+ +P   T+
Sbjct: 310 GRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDAVKLFEEMGTLQCIPSVVTY 369

Query: 364 CSLLSTVCLS-GRFSLLP---KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
            +++  +  S  R S +    + + G  +      Y+ L+  FCK     +A+ L   M 
Sbjct: 370 NTIIKALFESKSRISEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMD 429

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
           +KGF P   ++  L+  L  A++ D A  ++Q +  N  + +A V+  ++  L +AGR  
Sbjct: 430 EKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSSARVYAVMIKHLGKAGRLD 489

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
            A+ LF          +V +Y   + GL   G  +EA     +M+     P+  +Y ++L
Sbjct: 490 DAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIIL 549

Query: 540 LSFCK----ERNIKMVKRLLQDVI 559
               K     R ++M+  + Q  I
Sbjct: 550 NGLAKTGGPHRAMEMLSNMKQSAI 573



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 81/333 (24%), Positives = 159/333 (47%), Gaps = 13/333 (3%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGM--VL 139
           DV ++  +I  + +  GRF+       E+ R GC  +  T ++   I + G+   +   +
Sbjct: 295 DVFTYTELIRGLGK-AGRFDEAYNFFHEMRREGC--RPDTVVINNMINFLGKAGRLDDAV 351

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLF----KIGRVDLGIKVLKETQL-PNFLSFNIALCN 194
           + F+EMG     P+    N ++  LF    +I  +    + +K + + P+  +++I +  
Sbjct: 352 KLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPFTYSILIDG 411

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
            CK N       ++  M  KGF P    +  L++   K  R   A++L   +     S S
Sbjct: 412 FCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSS 471

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
              + V+I    +  RLD A  L+++M + GC+PNV  Y +L+ G   A M   A + + 
Sbjct: 472 ARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMR 531

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            ++  G  PD+  +N++++ L+K G    A+++   + +  + PD+ ++ ++L  +  +G
Sbjct: 532 RMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHAG 591

Query: 375 RFSLLPKLVCGLEV---EADLVVYNALLSYFCK 404
            F    KL+  + V   E DL+ Y+++L    K
Sbjct: 592 LFEEAAKLMKEMNVLGFEYDLITYSSILEAIGK 624



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/212 (21%), Positives = 95/212 (44%), Gaps = 7/212 (3%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFL 186
           R E   M+LE  DE G   F P   A   ++D L K  R D+  ++ +E +      +  
Sbjct: 417 RTEKAMMLLEEMDEKG---FPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSSAR 473

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
            + + + +L K   + +  ++   M + G  PNV  +  L++   + G + EA   +  M
Sbjct: 474 VYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRM 533

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
              G    +N++ ++++G  +      A  +   M Q+   P+ V+Y +++     A +F
Sbjct: 534 QEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHAGLF 593

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
             A   +  +   G   DL+ ++ +++ + K+
Sbjct: 594 EEAAKLMKEMNVLGFEYDLITYSSILEAIGKV 625



 Score = 47.8 bits (112), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 1/170 (0%)

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           ++R L  A+ I +A+ ++  I +      A  + +++  L+  G+  K  +L+     E 
Sbjct: 161 IIRMLGNAKMISKAVAIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEG 220

Query: 493 YPL-DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
           +   D V+Y+  I    + GR + A  L ++MK   + P A  Y +++  F K  N+   
Sbjct: 221 HCFPDTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGA 280

Query: 552 KRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
             L +++       D  T   L + + K      A N   EM   G  PD
Sbjct: 281 LGLFEEMRHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPD 330


>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 582

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 126/501 (25%), Positives = 242/501 (48%), Gaps = 46/501 (9%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLR-IYWRGEMYGMVLE 140
           D  +F+ +I+  ++L G       + G++ + G    A TF   ++ +  +G ++   L 
Sbjct: 104 DFFTFNILINCFSQL-GLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIH-QALN 161

Query: 141 AFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLC 196
             D++   GF  +  +   +++ L K+GR+   +++LK        PN + +N+ + N+C
Sbjct: 162 FHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMC 221

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
           K   V++  D+   MV K   P+      L+  FC MG++ EA  LL  MI    +  + 
Sbjct: 222 KAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMY 281

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
            +++L+D F +  ++  A  +    ++     +VVTY SL+ G+   K  + A    D +
Sbjct: 282 TFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSM 341

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
            S G   ++  +  +I+ L K+   D+A+++++ +   K++P+  T+ SL+  +   G+ 
Sbjct: 342 ASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKI 401

Query: 377 SLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
           S + KLV  +       +++ YN++L   CK    ++A+ L   + D+G  PD Y++  L
Sbjct: 402 SCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVL 461

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           ++GLC                                   ++G+   A ++F   +V+ Y
Sbjct: 462 IKGLC-----------------------------------QSGKLEDAQKVFEDLLVKGY 486

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
            LDV +YTV I+G    G  + A  L S+M+     PNA TY +++LS  ++    M ++
Sbjct: 487 NLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEK 546

Query: 554 LLQDVIDARIELDYHTSIRLT 574
           LL+++I AR  LD  + I L 
Sbjct: 547 LLREMI-ARGLLDEKSYIYLA 566



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 103/468 (22%), Positives = 214/468 (45%), Gaps = 40/468 (8%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P  + FN  L +L K    S    +   M   G   +   F IL+NCF ++G  + ++ +
Sbjct: 68  PPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSV 127

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
            G ++  G   +   +  LI G      +  A    +K+V  G   + V+Y +LI G  +
Sbjct: 128 FGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCK 187

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
               + A   L  ++ +   P+ V +N++ID + K    +DA D+Y  ++  ++ PD +T
Sbjct: 188 VGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFT 247

Query: 363 FCSLLSTVCLSGR----------------------FSLL------------PKLVCGLEV 388
             SL+   C+ G+                      FS+L             K++ G+ +
Sbjct: 248 CNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTM 307

Query: 389 EADL----VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
           + D+    V YN+L+  +C     N+A  ++++M  +G   +  S+  ++ GLC  + +D
Sbjct: 308 KKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVD 367

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
           EA+N+++ +       N   + +++D L + G+    ++L         P ++++Y   +
Sbjct: 368 EAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSIL 427

Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
             L +    ++A  L + +K   + P+ YTY V++   C+   ++  +++ +D++     
Sbjct: 428 DALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYN 487

Query: 565 LDYHT-SIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLS 611
           LD +T ++ +  F  K     +A+  L +M + G IP+    ++ +LS
Sbjct: 488 LDVYTYTVMIQGFCVK-GLFDAALALLSKMEDNGCIPNAKTYEIVILS 534



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 73/303 (24%), Positives = 130/303 (42%), Gaps = 41/303 (13%)

Query: 287 SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALD 346
           +P ++ +  ++   ++AK  S A S    +E  G   D    N+LI+C S++G    +  
Sbjct: 67  TPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFS 126

Query: 347 VYDGLLELKLVPDSYTFCSLLSTVCLSGR---------------FSL------------- 378
           V+  +L+    P++ TF +L+  +CL G                F L             
Sbjct: 127 VFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLC 186

Query: 379 ----------LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
                     L K V G  V+ + V+YN ++   CKA   N A  LY+ M+ K  +PD++
Sbjct: 187 KVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDF 246

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
           +   L+ G C   ++ EA+ +   +++ N     +  + +VD   + G+  +A  +    
Sbjct: 247 TCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVT 306

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
           + +   LDVV+Y   + G        +A  ++  M    V  N  +Y  M+   CK   I
Sbjct: 307 MKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCK---I 363

Query: 549 KMV 551
           KMV
Sbjct: 364 KMV 366


>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
 gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
          Length = 814

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 203/444 (45%), Gaps = 7/444 (1%)

Query: 122 FLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVL 177
           F   +  + +G      ++ F +M   G  PN    N V+D L   GR D       K++
Sbjct: 252 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV 311

Query: 178 KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIA 237
           +    P  ++++I +  L +   + +   V+  M +KGF PNV ++  L++ F + G + 
Sbjct: 312 ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLN 371

Query: 238 EAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLI 297
           +A ++  LM++ G SL+ + +  LI G+ +  + D A  L ++M+  G + N  ++TS+I
Sbjct: 372 KAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 431

Query: 298 KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
                  MF  A  F+  +     +P       LI  L K G +  AL+++   L    V
Sbjct: 432 CLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFV 491

Query: 358 PDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKL 414
            D+ T  +LL  +C +G+      + K + G     D V YN L+S  C     ++A   
Sbjct: 492 VDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMF 551

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
            + M+ +G  PDNY++  L+ GL    K++EAI  +     N    + + ++ ++D   +
Sbjct: 552 LDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCK 611

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
           A R  +  + F   + +    + V Y   IR     GR   A  L   MKH  + PN+ T
Sbjct: 612 AERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSAT 671

Query: 535 YRVMLLSFCKERNIKMVKRLLQDV 558
           Y  ++        ++  K L +++
Sbjct: 672 YTSLIKGMSIISRVEEAKLLFEEM 695



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 106/421 (25%), Positives = 189/421 (44%), Gaps = 39/421 (9%)

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
            P+  + NI L +L + N+     +   + V KG  P+V +F   +N FCK G++ EA +
Sbjct: 212 FPSKTTCNILLTSLVRANEFQKCCEAFDV-VCKGVSPDVYLFTTAINAFCKGGKVEEAVK 270

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           L   M   G + +V  +  +IDG     R D A    EKMV+ G  P ++TY+ L+KG  
Sbjct: 271 LFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLT 330

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
            AK    A+  L  +  +G  P+++ +N LID   + GS + A+++ D ++   L   S 
Sbjct: 331 RAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSS 390

Query: 362 TFCSLLSTVCLSGR----------------------FSLLPKLVC-------GLEVEADL 392
           T+ +L+   C +G+                      F+ +  L+C        L    ++
Sbjct: 391 TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEM 450

Query: 393 VVYN---------ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
           ++ N          L+S  CK G  ++A++L+   L+KGF  D  +   LL GLC A K+
Sbjct: 451 LLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKL 510

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           DEA  + + I+     ++   +  ++       +  +A       +      D  +Y++ 
Sbjct: 511 DEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSIL 570

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           I GL    + EEA   +   K   + P+ YTY VM+   CK    +  +    +++   +
Sbjct: 571 ICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNV 630

Query: 564 E 564
           +
Sbjct: 631 Q 631



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 101/418 (24%), Positives = 193/418 (46%), Gaps = 7/418 (1%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFL----SFNIALC 193
            +E  D M   G +  +   N ++    K G+ D   ++LKE     F     SF   +C
Sbjct: 373 AIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVIC 432

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
            LC      +    +G M+ +   P   +   L++  CK G+ ++A +L    +  G  +
Sbjct: 433 LLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVV 492

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
                  L+ G     +LD A  + ++++  GC  + V+Y +LI G    K    AF FL
Sbjct: 493 DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 552

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           D +   G  PD   +++LI  L  M   ++A+  +D      ++PD YT+  ++   C +
Sbjct: 553 DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA 612

Query: 374 GRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
            R     +    +    V+ + VVYN L+  +C++G  + A++L   M  KG +P++ ++
Sbjct: 613 ERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATY 672

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             L++G+    +++EA  +++ + M     N   +TA++D   + G+  K   L R    
Sbjct: 673 TSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHS 732

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
           +    + ++YTV I G    G   EA  L ++M+   + P++ TY+  +  + K+  +
Sbjct: 733 KNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGV 790


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 114/455 (25%), Positives = 205/455 (45%), Gaps = 36/455 (7%)

Query: 136 GMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIAL 192
           G V+EA    D M   G  PN      ++D + K+G     + +L++ +  + +  N+ +
Sbjct: 193 GRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVI 252

Query: 193 CNL----------CKLNDVSNVKDVIG-MMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
             L          C     S  + ++  M+ RK   P+V  +  L+N F K G+  EA +
Sbjct: 253 WPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEE 312

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           L   M+  G   S   ++ +IDGF +  RLD A +++  M   GCSP+++T+ +LI G+ 
Sbjct: 313 LYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYC 372

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
            AK        L  +   G   + + +  LI    ++G  + A D+   ++   + P+  
Sbjct: 373 RAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVV 432

Query: 362 TFCSLLSTVCLSGR-------FSLLPKLVCGLE-------VEADLVVYNALLSYFCKAGF 407
           T  +LL  +C +G+       F  + K    ++       VE D+  YN L+S     G 
Sbjct: 433 TCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGK 492

Query: 408 PNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTA 467
             +A +LY  M  +G  PD  ++  ++ GLC   ++DEA  ++  +   + + N    T 
Sbjct: 493 FLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTT 552

Query: 468 IVDRLIEAGRCHKAIQLF----RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM 523
           +++   +AGR    ++LF    RR IV     + ++Y   I G  + G    A  ++ +M
Sbjct: 553 LINGYCKAGRVDDGLELFCEMGRRGIVA----NAITYITLIHGFRKVGNINGALDIFQEM 608

Query: 524 KHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
               V P+  T R ML     +  +K    +L+D+
Sbjct: 609 MASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDL 643



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 128/542 (23%), Positives = 231/542 (42%), Gaps = 26/542 (4%)

Query: 83  VQSFDHMISVVTRLTGRFETVRGI--VGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLE 140
           V  F  ++ VV R+ GR + V  +    E+ RV C   A +F + ++ +         L 
Sbjct: 78  VIDFCKLMGVVVRM-GRLDVVISLHRKMEMRRVPC--NAYSFTILMKCFCSCSKLPFALS 134

Query: 141 AFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLND 200
            F ++ + GF P     + ++  L    R+   + +  +   PN ++F   +  LC+   
Sbjct: 135 TFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMCKPNVVTFTTLMNGLCREGR 194

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG-TSLSVNAW- 258
           V     ++  M+  G  PN   +  +++  CKMG    A  LL  M  +     +V  W 
Sbjct: 195 VVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWP 254

Query: 259 ----TVLIDGFRRLRRLDMAGYLWEKMVQ-NGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
               T +I+GF    R   A  L ++M++    SP+VVTY +LI  F++   F  A    
Sbjct: 255 LERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELY 314

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           D +   G  P  + ++ +ID   K    D A  ++  +      PD  TF +L++  C +
Sbjct: 315 DEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRA 374

Query: 374 GRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
            R     KL+  +    + A+ + Y  L+  FC+ G  N A  L   M+  G  P+  + 
Sbjct: 375 KRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTC 434

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNA-----------HVHTAIVDRLIEAGRCH 479
             LL GLC   K+ +A+ +++ +  +   ++A             +  ++  LI  G+  
Sbjct: 435 NTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFL 494

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
           +A +L+          D ++Y   I GL +  R +EA  ++  M   +  PN  T+  ++
Sbjct: 495 EAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 554

Query: 540 LSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLI 599
             +CK   +     L  ++    I  +  T I L     K  + + A++   EM   G+ 
Sbjct: 555 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVY 614

Query: 600 PD 601
           PD
Sbjct: 615 PD 616



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/407 (23%), Positives = 180/407 (44%), Gaps = 14/407 (3%)

Query: 170 VDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
           +DL   +++   LP+ + F   +  + ++  +  V  +   M  +    N   F IL+ C
Sbjct: 63  IDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTILMKC 122

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
           FC   ++  A    G +  LG   +V  ++ L+ G     R+  A  L+ +M    C PN
Sbjct: 123 FCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM----CKPN 178

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
           VVT+T+L+ G         A + LD +  +G  P+ + +  ++D + KMG    AL++  
Sbjct: 179 VVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLR 238

Query: 350 GLLELKLVPDSYTFCSLLSTVCL------SGRFS----LLPKLVCGLEVEADLVVYNALL 399
            + E+  +  +     L    C+      SGR+S    LL +++   ++  D+V YNAL+
Sbjct: 239 KMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALI 298

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
           + F K G   +A +LY+ ML +G  P   ++  ++ G C   ++D A +++  +     +
Sbjct: 299 NAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS 358

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            +      ++     A R    I+L           + ++YT  I G  + G    A  L
Sbjct: 359 PDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDL 418

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
             +M    V PN  T   +L   C    +K    + + +  +++++D
Sbjct: 419 LQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDID 465



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 150/335 (44%), Gaps = 18/335 (5%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV--LKETQ--LPNFLSFNIALCNL 195
           E +DEM   G  P+T   + ++D   K  R+D    +  L  T+   P+ ++FN  +   
Sbjct: 312 ELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGY 371

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
           C+   V +   ++  M   G   N   +  L++ FC++G +  A  LL  M++ G   +V
Sbjct: 372 CRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNV 431

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQ-----------NGCSPNVVTYTSLIKGFMEAK 304
                L+DG     +L  A  +++ M +           NG  P+V TY  LI G +   
Sbjct: 432 VTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEG 491

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
            F  A    + +   G  PD + +N +I  L K    D+A  ++D +      P+  TF 
Sbjct: 492 KFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFT 551

Query: 365 SLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
           +L++  C +GR     +L C +    + A+ + Y  L+  F K G  N A+ ++  M+  
Sbjct: 552 TLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMAS 611

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
           G  PD  +   +L GL    ++  A+ + + + M+
Sbjct: 612 GVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQMS 646



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 160/391 (40%), Gaps = 30/391 (7%)

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           L  GF  ++ L+ A  L+  MV++   P+V+ +  L+   +      +  S    +E   
Sbjct: 49  LRSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRR 108

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
              +     +L+ C         AL  +  + +L   P   TF +LL  +C+  R S   
Sbjct: 109 VPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEAL 168

Query: 381 KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
            L   +  + ++V +  L++  C+ G   +AV L + ML+ G  P+  ++  ++ G+C  
Sbjct: 169 DLFHQM-CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKM 227

Query: 441 ----------RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
                     RK++E  ++   +V+          T +++    +GR  +A QL +  + 
Sbjct: 228 GDTVSALNLLRKMEEVSHIKPNVVI----WPLERRTCMINGFCSSGRWSEAQQLLQEMLE 283

Query: 491 -EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
            +K   DVV+Y   I   ++ G+  EA  LY +M    + P+  TY  M+  FCK+  + 
Sbjct: 284 RKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLD 343

Query: 550 MVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGL 609
             + +   +       D  T   L     +       +  L EM   GL+ +        
Sbjct: 344 AAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVAN-------- 395

Query: 610 LSDETMTPVSLFDGFVPCERRAGNANHLLLN 640
               T+T  +L  GF  C+    NA   LL 
Sbjct: 396 ----TITYTTLIHGF--CQVGDLNAAQDLLQ 420


>gi|356547408|ref|XP_003542104.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Glycine max]
          Length = 631

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 123/532 (23%), Positives = 235/532 (44%), Gaps = 45/532 (8%)

Query: 65  IALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLL 124
           + + FF W  K+R++ HD  ++  +I  +      F  V   + ++ +  C +       
Sbjct: 100 VKIQFFKWAGKRRNFEHDSTTYMALIRCLDEHR-MFGEVWKTIQDMVKGSCAMAPAELSE 158

Query: 125 FLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ--- 181
            +RI  + +M    L  F ++      P     N ++ +L + G  +   ++  E     
Sbjct: 159 IVRILGKAKMVNRALSVFYQVKGRKCRPTASTYNSIILMLMQEGHHEKVHELYNEMCSEV 218

Query: 182 --LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEA 239
              P+ ++++  +    KLN   +   +   M   G  P  +++  L+  + K+G++ EA
Sbjct: 219 HCFPDTVTYSALISAFAKLNRDDSAIRLFDEMKENGLQPTAKIYTTLMGIYFKVGKVEEA 278

Query: 240 YQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGC------------- 286
             L+  M      L+V  +T LI G  +  R++ A   ++ M+++GC             
Sbjct: 279 LGLVKEMRARRCLLTVFTYTELIRGLGKSGRVEDAYMTYKNMLKDGCKPDVVLMNNLINI 338

Query: 287 ----------------------SPNVVTYTSLIKGFMEAKM-FSIAFSFLDMLESEGHAP 323
                                 +PNVVTY ++IK   EAK   S A S+ + ++ +G  P
Sbjct: 339 LGRSNHLRDAIKLFDEMKLLNCAPNVVTYNTIIKSLFEAKAPLSEASSWFERMKKDGIVP 398

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV 383
               +++LID   K    + AL + + + E    P    +CSL++T+ ++ R+ +  +L 
Sbjct: 399 SSFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINTLGVAKRYDVANELF 458

Query: 384 CGLEVE---ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
             L+     +   VY  ++ +F K G  N+A+ L+N M   G TPD Y++  L+ G+  A
Sbjct: 459 QELKENCGCSSARVYAVMIKHFGKCGRLNEAINLFNEMKKLGCTPDVYAYNALMTGMVRA 518

Query: 441 RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSY 500
            ++DEA ++++ +  N    + + H  I++ L   G    A+++F +        DVVS+
Sbjct: 519 ERMDEAFSLFRTMEENGCTPDINSHNIILNGLARTGGPKGALEMFTKMKNSTIKPDVVSF 578

Query: 501 TVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVK 552
              +  L   G  EEA  L  +M       +  TY  +L +  K  + KMV+
Sbjct: 579 NTILGCLSRAGLFEEAAKLMQEMSSKGFQYDLITYSSILEAVGKVDDCKMVE 630



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/294 (20%), Positives = 136/294 (46%), Gaps = 8/294 (2%)

Query: 273 MAGYLW---EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHN 329
           M G +W   + MV+  C+      + +++   +AKM + A S    ++     P    +N
Sbjct: 133 MFGEVWKTIQDMVKGSCAMAPAELSEIVRILGKAKMVNRALSVFYQVKGRKCRPTASTYN 192

Query: 330 VLIDCLSKMGSYDDALDVYDGLL-ELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE- 387
            +I  L + G ++   ++Y+ +  E+   PD+ T+ +L+S      R     +L   ++ 
Sbjct: 193 SIILMLMQEGHHEKVHELYNEMCSEVHCFPDTVTYSALISAFAKLNRDDSAIRLFDEMKE 252

Query: 388 --VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
             ++    +Y  L+  + K G   +A+ L   M  +      +++  L+RGL  + ++++
Sbjct: 253 NGLQPTAKIYTTLMGIYFKVGKVEEALGLVKEMRARRCLLTVFTYTELIRGLGKSGRVED 312

Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
           A   Y+ ++ +    +  +   +++ L  +     AI+LF    +     +VV+Y   I+
Sbjct: 313 AYMTYKNMLKDGCKPDVVLMNNLINILGRSNHLRDAIKLFDEMKLLNCAPNVVTYNTIIK 372

Query: 506 GLLEG-GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
            L E      EA   + +MK   + P+++TY +++  +CK   ++    LL+++
Sbjct: 373 SLFEAKAPLSEASSWFERMKKDGIVPSSFTYSILIDGYCKTNRVEKALLLLEEM 426



 Score = 39.7 bits (91), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 36/170 (21%), Positives = 71/170 (41%), Gaps = 1/170 (0%)

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           ++R L  A+ ++ A++V+  +        A  + +I+  L++ G   K  +L+     E 
Sbjct: 159 IVRILGKAKMVNRALSVFYQVKGRKCRPTASTYNSIILMLMQEGHHEKVHELYNEMCSEV 218

Query: 493 YPL-DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
           +   D V+Y+  I    +  R + A  L+ +MK   + P A  Y  ++  + K   ++  
Sbjct: 219 HCFPDTVTYSALISAFAKLNRDDSAIRLFDEMKENGLQPTAKIYTTLMGIYFKVGKVEEA 278

Query: 552 KRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
             L++++   R  L   T   L + + K      A      M   G  PD
Sbjct: 279 LGLVKEMRARRCLLTVFTYTELIRGLGKSGRVEDAYMTYKNMLKDGCKPD 328


>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19440, chloroplastic; Flags: Precursor
          Length = 838

 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 203/444 (45%), Gaps = 7/444 (1%)

Query: 122 FLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVL 177
           F   +  + +G      ++ F +M   G  PN    N V+D L   GR D       K++
Sbjct: 276 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV 335

Query: 178 KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIA 237
           +    P  ++++I +  L +   + +   V+  M +KGF PNV ++  L++ F + G + 
Sbjct: 336 ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLN 395

Query: 238 EAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLI 297
           +A ++  LM++ G SL+ + +  LI G+ +  + D A  L ++M+  G + N  ++TS+I
Sbjct: 396 KAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 455

Query: 298 KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
                  MF  A  F+  +     +P       LI  L K G +  AL+++   L    V
Sbjct: 456 CLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFV 515

Query: 358 PDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKL 414
            D+ T  +LL  +C +G+      + K + G     D V YN L+S  C     ++A   
Sbjct: 516 VDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMF 575

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
            + M+ +G  PDNY++  L+ GL    K++EAI  +     N    + + ++ ++D   +
Sbjct: 576 LDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCK 635

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
           A R  +  + F   + +    + V Y   IR     GR   A  L   MKH  + PN+ T
Sbjct: 636 AERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSAT 695

Query: 535 YRVMLLSFCKERNIKMVKRLLQDV 558
           Y  ++        ++  K L +++
Sbjct: 696 YTSLIKGMSIISRVEEAKLLFEEM 719



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 106/421 (25%), Positives = 189/421 (44%), Gaps = 39/421 (9%)

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
            P+  + NI L +L + N+     +   + V KG  P+V +F   +N FCK G++ EA +
Sbjct: 236 FPSKTTCNILLTSLVRANEFQKCCEAFDV-VCKGVSPDVYLFTTAINAFCKGGKVEEAVK 294

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           L   M   G + +V  +  +IDG     R D A    EKMV+ G  P ++TY+ L+KG  
Sbjct: 295 LFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLT 354

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
            AK    A+  L  +  +G  P+++ +N LID   + GS + A+++ D ++   L   S 
Sbjct: 355 RAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSS 414

Query: 362 TFCSLLSTVCLSGR----------------------FSLLPKLVC-------GLEVEADL 392
           T+ +L+   C +G+                      F+ +  L+C        L    ++
Sbjct: 415 TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEM 474

Query: 393 VVYN---------ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
           ++ N          L+S  CK G  ++A++L+   L+KGF  D  +   LL GLC A K+
Sbjct: 475 LLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKL 534

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           DEA  + + I+     ++   +  ++       +  +A       +      D  +Y++ 
Sbjct: 535 DEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSIL 594

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           I GL    + EEA   +   K   + P+ YTY VM+   CK    +  +    +++   +
Sbjct: 595 ICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNV 654

Query: 564 E 564
           +
Sbjct: 655 Q 655



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 101/418 (24%), Positives = 193/418 (46%), Gaps = 7/418 (1%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFL----SFNIALC 193
            +E  D M   G +  +   N ++    K G+ D   ++LKE     F     SF   +C
Sbjct: 397 AIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVIC 456

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
            LC      +    +G M+ +   P   +   L++  CK G+ ++A +L    +  G  +
Sbjct: 457 LLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVV 516

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
                  L+ G     +LD A  + ++++  GC  + V+Y +LI G    K    AF FL
Sbjct: 517 DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 576

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           D +   G  PD   +++LI  L  M   ++A+  +D      ++PD YT+  ++   C +
Sbjct: 577 DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA 636

Query: 374 GRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
            R     +    +    V+ + VVYN L+  +C++G  + A++L   M  KG +P++ ++
Sbjct: 637 ERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATY 696

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             L++G+    +++EA  +++ + M     N   +TA++D   + G+  K   L R    
Sbjct: 697 TSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHS 756

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
           +    + ++YTV I G    G   EA  L ++M+   + P++ TY+  +  + K+  +
Sbjct: 757 KNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGV 814


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/474 (23%), Positives = 207/474 (43%), Gaps = 76/474 (16%)

Query: 175 KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
           ++++   LP+ + F+     + +    + V D    +   G   N+    I++NCFC+  
Sbjct: 68  EMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCC 127

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
           +   AY +LG ++ LG       +  LI G     ++  A  L ++MV+NGC P+VVTY 
Sbjct: 128 KTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYN 187

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
           S++ G   +   S+A   L  +E      D+  ++ +ID L + G  D A+ ++  +   
Sbjct: 188 SIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK 247

Query: 355 KLVPDSYTFCSLLSTVCLSGRF---SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQA 411
            +     T+ SL+  +C +G++   +LL K +   E+  +++ +N LL  F K G   +A
Sbjct: 248 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 307

Query: 412 VKLYNTMLDKGFTP---------DNY--------------------------SFVGLLRG 436
            +LY  M+ +G +P         D Y                          +F  L++G
Sbjct: 308 NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 367

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV--------------------------- 469
            C  +++D+ + V++ I       NA  ++ +V                           
Sbjct: 368 YCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPD 427

Query: 470 --------DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYS 521
                   D L + G+  KA+++F      K  L +V YT  I G+ +GG+ E+A+ L+ 
Sbjct: 428 VMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFC 487

Query: 522 QMKHIAVPPNAYTYRVMLLSFCKERNIKMVK---RLLQDVIDARIELDYHTSIR 572
            +    V PN  TY VM+   CK+ ++       R +++  +A  +  Y+T IR
Sbjct: 488 SLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 541



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/419 (23%), Positives = 200/419 (47%), Gaps = 7/419 (1%)

Query: 147 RFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVS 202
           + G+ P+T   N ++  LF  G+V   +    ++++    P+ +++N  +  +C+  D S
Sbjct: 141 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 200

Query: 203 NVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLI 262
              D++  M  +    +V  +  +++  C+ G I  A  L   M T G   SV  +  L+
Sbjct: 201 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 260

Query: 263 DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
            G  +  + +    L + MV     PNV+T+  L+  F++      A      + + G +
Sbjct: 261 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 320

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL 382
           P+++ +N L+D         +A ++ D ++  K  PD  TF SL+   C+  R     K+
Sbjct: 321 PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKV 380

Query: 383 VCGLEVE---ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
              +      A+ V Y+ L+  FC++G    A +L+  M+  G  PD  ++  LL GLC 
Sbjct: 381 FRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCD 440

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
             K+++A+ +++ +  +   +   ++T I++ + + G+   A  LF     +    +V++
Sbjct: 441 NGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMT 500

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           YTV I GL + G   EA IL  +M+     PN  TY  ++ +  ++ ++    +L++++
Sbjct: 501 YTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 559



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 120/514 (23%), Positives = 218/514 (42%), Gaps = 54/514 (10%)

Query: 79  YFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMV 138
           Y  D  +F+ +I  +  L G+      +V  +   GC     T+   +    R     + 
Sbjct: 144 YEPDTTTFNTLIKGLF-LEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 202

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCN 194
           L+   +M       + F  + ++D L + G +D  I + KE +      + +++N  +  
Sbjct: 203 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 262

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           LCK    ++   ++  MV +   PNV  F +LL+ F K G++ EA +L   MIT G S +
Sbjct: 263 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 322

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           +  +  L+DG+    RL  A  + + MV+N CSP++VT+TSLIKG+              
Sbjct: 323 IITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGY-------------- 368

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
                              C+ K    DD + V+  + +  LV ++ T+  L+   C SG
Sbjct: 369 -------------------CMVK--RVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSG 407

Query: 375 RFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
           +  L  +L   +    V  D++ Y  LL   C  G   +A++++  +           + 
Sbjct: 408 KIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYT 467

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            ++ G+C   K+++A N++  +       N   +T ++  L + G   +A  L R+   +
Sbjct: 468 TIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEED 527

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV---MLLSFCKERNI 548
               +  +Y   IR  L  G    +  L  +MK      +A + ++   MLLS  K   +
Sbjct: 528 GNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTL 587

Query: 549 KMV----KRLLQDVIDARIELDYHTSIRLTKFIF 578
           +       +  QD+    +EL     IRL+   F
Sbjct: 588 RYCLSKGSKSRQDL----LELSGSEKIRLSSLTF 617



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/310 (21%), Positives = 150/310 (48%), Gaps = 5/310 (1%)

Query: 270 RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHN 329
           + D A  L+++M+++   P++V ++         K F++   F   LE  G A ++   N
Sbjct: 58  KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 117

Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLVCG 385
           ++I+C  +      A  V   +++L   PD+ TF +L+  + L G+ S    L+ ++V  
Sbjct: 118 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 177

Query: 386 LEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
              + D+V YN++++  C++G  + A+ L   M ++    D +++  ++  LC    ID 
Sbjct: 178 -GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 236

Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
           AI++++ +       +   + ++V  L +AG+ +    L +  +  +   +V+++ V + 
Sbjct: 237 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 296

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
             ++ G+ +EA  LY +M    + PN  TY  ++  +C +  +     +L  ++  +   
Sbjct: 297 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 356

Query: 566 DYHTSIRLTK 575
           D  T   L K
Sbjct: 357 DIVTFTSLIK 366



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/263 (20%), Positives = 108/263 (41%), Gaps = 38/263 (14%)

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNAL 398
           DDA+ ++  ++  + +P    F    S +  + +F+L+      LE+     ++   N +
Sbjct: 60  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 119

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           ++ FC+      A  +   ++  G+ PD  +F  L++GL    K+ EA+           
Sbjct: 120 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAV----------- 168

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
                    +VDR++E G C                 DVV+Y   + G+   G T  A  
Sbjct: 169 --------VLVDRMVENG-CQP---------------DVVTYNSIVNGICRSGDTSLALD 204

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
           L  +M+   V  + +TY  ++ S C++  I     L +++    I+    T   L + + 
Sbjct: 205 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 264

Query: 579 KFHSSSSAVNQLVEMCNLGLIPD 601
           K    +     L +M +  ++P+
Sbjct: 265 KAGKWNDGALLLKDMVSREIVPN 287



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 5/78 (6%)

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M+++G  PN   +  L++ FCK  R+ EA Q+L LM+T G S        L+ G  R +R
Sbjct: 725 MIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKGDS----DIRYLLAGLMRKKR 780

Query: 271 LDMAGYLWEKMVQN-GCS 287
                  WE +  +  CS
Sbjct: 781 KGSETEGWENLPDDLSCS 798



 Score = 41.6 bits (96), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 30/49 (61%)

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
           A  L ++M+Q G +PN +TY+SLI GF +      A   LD++ ++G +
Sbjct: 718 AEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKGDS 766


>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
          Length = 457

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 177/356 (49%), Gaps = 7/356 (1%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR      ++ E+ R  CV    T+ + L    +   Y   ++  DEM   G TP+    
Sbjct: 46  GRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTY 105

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N+V++ + + GRVD  I+ LK        PN +S+NI L  LC      + ++++G M +
Sbjct: 106 NVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQ 165

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           KG  PNV  F +L++  C+ G +  A ++L  +   G + +  ++  L+  F + +++D 
Sbjct: 166 KGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDK 225

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A    + MV  GC P++V+Y +L+     +    +A   L  L+ +G AP L+ +N +ID
Sbjct: 226 AMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVID 285

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEA 390
            L+K G   +AL++ + ++   L PD  T+ ++ + +C   R     +    V  + +  
Sbjct: 286 GLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRP 345

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
           + V+YNA++   CK    + A+ L+  M+  G  P+  ++  L+ GL     I EA
Sbjct: 346 NTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEA 401



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 110/477 (23%), Positives = 207/477 (43%), Gaps = 63/477 (13%)

Query: 168 GRVDLGIKVLKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEIL 226
           G++D   +++ E  + P+  ++N  +  LC     +N   V+  M+R+   P+V  + IL
Sbjct: 14  GQLDAARRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTIL 73

Query: 227 LNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGC 286
           L   CK     +A +LL  M   G +  +  + V+++G  +  R+D A    + +   GC
Sbjct: 74  LEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGC 133

Query: 287 SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALD 346
            PN V+Y  ++KG   A+ +  A   +  +  +G  P++V  N+LI  L + G  + AL+
Sbjct: 134 EPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALE 193

Query: 347 VYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAG 406
           V + + +    P+S +                                YN LL  FCK  
Sbjct: 194 VLEQIPKYGCTPNSLS--------------------------------YNPLLHAFCKQK 221

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
             ++A+   + M+ +G  PD  S+  LL  LC + ++D A+ +   +     A     + 
Sbjct: 222 KMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYN 281

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
            ++D L +AG+  +A++L    + +    D+++Y+    GL    R E+A   + +++ +
Sbjct: 282 TVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDM 341

Query: 527 AVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF--KFHSSS 584
            + PN   Y  ++L  CK R                   + H++I L  ++       + 
Sbjct: 342 GIRPNTVLYNAIILGLCKRR-------------------ETHSAIDLFAYMIGNGCMPNE 382

Query: 585 SAVNQLVE-MCNLGLIP------DEMWRKLG--LLSDETMTPVSLFDGFVPCERRAG 632
           S    L+E +   GLI       DE+  + G  +L D  +  V+    F+PC    G
Sbjct: 383 STYTILIEGLAYEGLIKEARDLLDELCSRAGEEILLDVHLIDVAFLTTFLPCSNANG 439



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/401 (22%), Positives = 177/401 (44%), Gaps = 49/401 (12%)

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWT--VLIDGFRRLRRLDMAGYLWEKMVQNGCS 287
           +C  G++  A +L+  M      +  +A+T   LI G     R   A  + ++M++  C 
Sbjct: 10  YCGAGQLDAARRLVAEM-----PVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCV 64

Query: 288 PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
           P+VVTYT L++   +   +  A   LD +  +G  PD+V +NV+++ + + G  DDA++ 
Sbjct: 65  PDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEF 124

Query: 348 YDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCK 404
              L      P++ ++  +L  +C + R+    +L+  +  +    ++V +N L+S+ C+
Sbjct: 125 LKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCR 184

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV 464
            G    A+++   +   G TP++ S+  LL   C  +K+D+A+                 
Sbjct: 185 KGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAM----------------- 227

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
             A +D ++  G C              YP D+VSY   +  L   G  + A  L  Q+K
Sbjct: 228 --AFLDLMVSRG-C--------------YP-DIVSYNTLLTALCRSGEVDVAVELLHQLK 269

Query: 525 HIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSS 584
                P   +Y  ++    K    K    LL +++   ++ D  T   +   + +     
Sbjct: 270 DKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIE 329

Query: 585 SAVNQLVEMCNLGLIPDEMWRK---LGLLS-DETMTPVSLF 621
            A+    ++ ++G+ P+ +      LGL    ET + + LF
Sbjct: 330 DAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLF 370



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/197 (21%), Positives = 87/197 (44%)

Query: 362 TFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
            + ++++  C +G+     +LV  + VE D   YN L+   C  G    A+ + + ML +
Sbjct: 2   AYNAMVAGYCGAGQLDAARRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRR 61

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
              PD  ++  LL   C      +A+ +   +       +   +  +V+ + + GR   A
Sbjct: 62  RCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDA 121

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
           I+  +         + VSY + ++GL    R E+A  L  +M     PPN  T+ +++  
Sbjct: 122 IEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISF 181

Query: 542 FCKERNIKMVKRLLQDV 558
            C++  ++    +L+ +
Sbjct: 182 LCRKGLVEPALEVLEQI 198



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/211 (20%), Positives = 92/211 (43%), Gaps = 3/211 (1%)

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           + YNA+++ +C AG  + A +L   M      PD Y++  L+RGLCG  +   A+ V   
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           ++      +   +T +++   +     +A++L      +    D+V+Y V + G+ + GR
Sbjct: 58  MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
            ++A      +      PN  +Y ++L   C     +  + L+ ++       +  T   
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177

Query: 573 LTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           L  F+ +      A+  L ++   G  P+ +
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSL 208


>gi|296081012|emb|CBI18516.3| unnamed protein product [Vitis vinifera]
          Length = 967

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 123/535 (22%), Positives = 228/535 (42%), Gaps = 52/535 (9%)

Query: 65  IALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGR---FETVRGIVGELARVG------- 114
           +AL F  W  KQ     +++   HM  +   +  +   +++ + I+  L ++G       
Sbjct: 92  LALKFLKWVIKQPGL--ELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMGIGSKSIF 149

Query: 115 ---------CVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
                    C      F L +R+Y +  M    +E F+ +G  GF P+ +  N+++  + 
Sbjct: 150 GALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMV 209

Query: 166 KIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
           K  R +L   + +E       PN  +FNI +  LC   ++    +++  M   GF P + 
Sbjct: 210 KDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIV 269

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            +  LLN +CK GR   A +L+  MI  G    V  + V ID      R   A  L +KM
Sbjct: 270 TYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKM 329

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
            +   SPN VTY +LI GF++     +A    + +     +P+ V +N LI     +G +
Sbjct: 330 RKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDF 389

Query: 342 DDALDVYDGLLELKLV-----------------------PDSYTFCSLLSTVCLSGRFSL 378
           ++AL + D +    L                         D +T   L+S++C  G+   
Sbjct: 390 EEALRLLDHMEAAGLRLNEHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGE 449

Query: 379 LPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
             K +C +    +  + + Y+ +++ +   G P  A   ++ M+  G  P  +++  LL+
Sbjct: 450 AEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLK 509

Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
           GLC    + EA      +     AV++ ++  ++    ++G  H+A+ LF + +      
Sbjct: 510 GLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLP 569

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILY-SQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
           D  +Y+  + GL   G+   A  L+ + M    + PN   Y  ++    K  + K
Sbjct: 570 DSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPK 624



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 118/486 (24%), Positives = 206/486 (42%), Gaps = 30/486 (6%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF---DEMGRFGFTPNT 154
           G+       +  ++R+G V  + T+   +  Y      G  L AF   D+M + G  P+ 
Sbjct: 445 GKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGS---IGDPLNAFSFFDDMIKCGQHPSF 501

Query: 155 FARNIVMDVLFKIGRVDLGIKVLKETQ-LPNFLS---FNIALCNLCKLNDVSNVKDVIGM 210
           F    ++  L K G +    K L     +P  +    +N  L   CK  ++     +   
Sbjct: 502 FTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDK 561

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA-WTVLIDGFRRLR 269
           MV+    P+   +  LL   C+ G+   A  L G  +  GT    +  +T L+DG  +  
Sbjct: 562 MVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAG 621

Query: 270 RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHN 329
               A Y +E+M++ G  P+ V + ++I           A  F   +   G  P+L  +N
Sbjct: 622 HPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYN 681

Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE 389
           +L+   SK  +    L +Y  ++   + PD  TF SL+  +  SG   L  KL+  + +E
Sbjct: 682 ILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIME 741

Query: 390 ADLVV---------------YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
              VV               Y  L++  C+ G    A KL + M   GF     +   ++
Sbjct: 742 ESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMV 801

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE--K 492
           RGL    K ++A+ V   ++           T ++ R     +  +A++L  + ++E   
Sbjct: 802 RGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKL--KGVMELCG 859

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVK 552
             LDVV+Y V I G+   G +  A+ LY +M+H  + PN  TY V++ +     N+   +
Sbjct: 860 LKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGE 919

Query: 553 RLLQDV 558
           +LL D+
Sbjct: 920 KLLTDL 925



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/431 (22%), Positives = 175/431 (40%), Gaps = 53/431 (12%)

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNL 195
           G+  + F+EM +F  +PN    N ++     +G  +  +++L   +              
Sbjct: 355 GVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGL---------- 404

Query: 196 CKLNDVSNVKD---VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
            +LN+  NV +   V  +M   G   +     +L++  C+ G++ EA + L  M  +G  
Sbjct: 405 -RLNEHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLV 463

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
            +   +  +I+G+  +     A   ++ M++ G  P+  TY SL+KG  +      A  F
Sbjct: 464 PNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKF 523

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
           L+ L     A D V +N L+    K G+  +A+ ++D +++  ++PDSYT+ SLL+ +C 
Sbjct: 524 LNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCR 583

Query: 373 SGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
            G+      L    +    +  + V+Y  L+    KAG P  A   +  M+ KG  PD  
Sbjct: 584 KGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTV 643

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
           +F                                    AI+D     G+  KA   F   
Sbjct: 644 AF-----------------------------------NAIIDSCSRRGQMMKANDFFSTM 668

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
                  ++ +Y + + G  +         LYS M    + P+  T+  ++L   K    
Sbjct: 669 RWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIP 728

Query: 549 KMVKRLLQDVI 559
            +  +LL  +I
Sbjct: 729 DLGVKLLGKMI 739



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 58/289 (20%), Positives = 118/289 (40%), Gaps = 38/289 (13%)

Query: 286 CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL 345
           C+     +  LI+ +++  M   A    +++   G  P +   N+++  + K    +   
Sbjct: 159 CNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVW 218

Query: 346 DVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYF 402
            ++  + +  + P+  TF  L++ +C+ G       L+  +E       +V YN LL+++
Sbjct: 219 SLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWY 278

Query: 403 CKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNA 462
           CK G    A++L + M+ KG   D  ++                 NV+            
Sbjct: 279 CKKGRYKAAIELIDYMICKGIEADVCTY-----------------NVF------------ 309

Query: 463 HVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQ 522
                 +D L    R  KA  L ++   E    + V+Y   I G ++ G+   A  ++++
Sbjct: 310 ------IDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNE 363

Query: 523 MKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSI 571
           M    + PN  TY  ++   C   + +   RLL  +  A + L+ H ++
Sbjct: 364 MSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEHGNV 412



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/301 (22%), Positives = 123/301 (40%), Gaps = 39/301 (12%)

Query: 105 GIVGELARVGCVIKAQTFLLFLRIYWRG-----EMYGMVLEAFDE-------------MG 146
            I+   +R G ++KA  F   +R  W G       Y ++L  F +             M 
Sbjct: 647 AIIDSCSRRGQMMKANDFFSTMR--WWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMM 704

Query: 147 RFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKD 206
           R G  P+    + ++  L K G  DLG+K+L +  +                 + S V  
Sbjct: 705 REGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIM-----------------EESTV-- 745

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
           V+  M+  G  P    +  L+N  C++G I  A++L   M  LG      A + ++ G  
Sbjct: 746 VLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLL 805

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
              + + A  + + M++    P + T+T+L+  F      + A     ++E  G   D+V
Sbjct: 806 HCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVV 865

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL 386
            +NVLI  +   G    A ++Y+ +    L P+  T+  L+  +  +       KL+  L
Sbjct: 866 AYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDL 925

Query: 387 E 387
           +
Sbjct: 926 Q 926



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 76/181 (41%), Gaps = 4/181 (2%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCK-LNDVS 202
           EM   G  P       +++ + ++G +    K+  E +   F S  +A   + + L    
Sbjct: 749 EMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCG 808

Query: 203 NVKD---VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
             +D   V+  M+R    P +  F  L++ FC+  +IAEA +L G+M   G  L V A+ 
Sbjct: 809 KTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYN 868

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
           VLI G         A  L+E+M      PN+ TY  L+     A         L  L+  
Sbjct: 869 VLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQER 928

Query: 320 G 320
           G
Sbjct: 929 G 929


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 125/535 (23%), Positives = 227/535 (42%), Gaps = 65/535 (12%)

Query: 99  RFETVRGIVGELARVGCVIKAQ------TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTP 152
            F T+ G +    R+   ++ Q       F   L    + + +  +L    +M  FG  P
Sbjct: 38  HFNTIDGAISSFNRM---LRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPP 94

Query: 153 NTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVI 208
           N +  +I+++    + RV        K+LK    P+  +F   +  +C    +     + 
Sbjct: 95  NIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLF 154

Query: 209 GMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRL 268
             M+ +GF P+V  +  L+N  CK+G  + A +LLG M+      +V A+  +ID   + 
Sbjct: 155 DKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKD 214

Query: 269 RRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH 328
           R++  A  L+ +MV  G SP++ TY SLI        +    + L+ +      PD+V  
Sbjct: 215 RQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSF 274

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV 388
           N ++D L K G   +A DV D +++  + P                              
Sbjct: 275 NTVVDALCKEGKVTEAHDVVDKMIQRGVEP------------------------------ 304

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI----- 443
             ++V Y AL+   C     ++AVK+++TM+ KG  P+  S+  L+ G C  ++I     
Sbjct: 305 --NVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIH 362

Query: 444 --------------DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
                         DEA+ V+  +V      N   +  +++   +  R  KA+ LF    
Sbjct: 363 YTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMC 422

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
            ++   D V+Y+  I GL    R ++A  L+ +M   +  PN  TYR++L   CK R + 
Sbjct: 423 RQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLA 482

Query: 550 MVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMW 604
               LL+ +  + ++ D   +      + +     +A +    + + GL PD +W
Sbjct: 483 EAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPD-VW 536



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 116/515 (22%), Positives = 228/515 (44%), Gaps = 19/515 (3%)

Query: 105 GIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVL 164
            ++ ++ ++G      TF   +R        G  L  FD+M   GF P+      +++ L
Sbjct: 117 SVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGL 176

Query: 165 FKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV 220
            K+G     I++L    ++   PN  ++N  + +LCK   V+   ++   MV KG  P++
Sbjct: 177 CKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDI 236

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
             +  L++  C +        LL  M+       V ++  ++D   +  ++  A  + +K
Sbjct: 237 FTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDK 296

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           M+Q G  PNVVTYT+L+ G         A    D +  +G  P+++ +N LI+   K+  
Sbjct: 297 MIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQR 356

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLS 400
            D A+  Y  L++          C  L+   +     +   +VC      +++ YN L++
Sbjct: 357 IDKAIH-YTXLMD--------XXCCYLN---MDEAVKVFDTMVCK-GCMPNVISYNTLIN 403

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
            +CK    ++A+ L+  M  +   PD  ++  L+ GLC   ++ +AI ++  +V  +   
Sbjct: 404 GYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIP 463

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
           N   +  ++D L +     +A+ L +         D+    +AI G+   G  E A  L+
Sbjct: 464 NLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLF 523

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKF 580
           S +    + P+ +TY +M+   C+   +    +L +++ +    L+      +T+   + 
Sbjct: 524 SNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRN 583

Query: 581 HSSSSAVNQLVEMCNLGLIPDEMWRKL--GLLSDE 613
           + +S A+  L EM   G   D     L   +LSD+
Sbjct: 584 NETSRAIQLLQEMVARGFSADASTMTLFVKMLSDD 618



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/457 (22%), Positives = 208/457 (45%), Gaps = 29/457 (6%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV ++  +I+ + ++      +R ++G + +  C      +   +    +          
Sbjct: 165 DVVTYGTLINGLCKVGNTSAAIR-LLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNL 223

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           F EM   G +P+ F  N ++  L  +        +L E      +P+ +SFN  +  LCK
Sbjct: 224 FSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCK 283

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              V+   DV+  M+++G  PNV  +  L++  C +  + EA ++   M+  G   +V +
Sbjct: 284 EGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVIS 343

Query: 258 WTVLIDGFRRLRRLDMAGY-------------------LWEKMVQNGCSPNVVTYTSLIK 298
           +  LI+G+ +++R+D A +                   +++ MV  GC PNV++Y +LI 
Sbjct: 344 YNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLIN 403

Query: 299 GFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP 358
           G+ + +    A      +  +   PD V ++ LI  L  +    DA+ ++  ++    +P
Sbjct: 404 GYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIP 463

Query: 359 DSYTFCSLLSTVC----LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKL 414
           +  T+  LL  +C    L+   +LL K + G  ++ D+ V N  +   C+AG    A  L
Sbjct: 464 NLVTYRILLDYLCKNRYLAEAMALL-KAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDL 522

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
           ++ +  KG  PD +++  ++ GLC    +DEA  +++ +  N   +N  ++  I    + 
Sbjct: 523 FSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLR 582

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
                +AIQL +  +   +  D  + T+ ++ L + G
Sbjct: 583 NNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG 619



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 115/465 (24%), Positives = 203/465 (43%), Gaps = 49/465 (10%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNI---ALCNLCKLNDVSNV 204
           PN FA N ++D L K  +V     +  E       P+  ++N    ALCNLC+   V+ +
Sbjct: 199 PNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATL 258

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
              +  MV     P+V  F  +++  CK G++ EA+ ++  MI  G   +V  +T L+DG
Sbjct: 259 ---LNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDG 315

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF------------ 312
              L  +D A  +++ MV  GC PNV++Y +LI G+ + +    A  +            
Sbjct: 316 HCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLN 375

Query: 313 -------LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
                   D +  +G  P+++ +N LI+   K+   D A+ ++  +   +L+PD+ T+ +
Sbjct: 376 MDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYST 435

Query: 366 LLSTVC----LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
           L+  +C    L    +L  ++V   ++  +LV Y  LL Y CK  +  +A+ L   +   
Sbjct: 436 LIHGLCHVERLQDAIALFHEMVACSQI-PNLVTYRILLDYLCKNRYLAEAMALLKAIEGS 494

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
              PD       + G+C A +++ A +++  +       +   ++ +++ L   G   +A
Sbjct: 495 NLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEA 554

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
            +LFR        L+   Y    RG L    T  A  L  +M       +A T  +    
Sbjct: 555 SKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTL---- 610

Query: 542 FCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSA 586
                    VK L  D +D  ++          K+I  F SSSS 
Sbjct: 611 --------FVKMLSDDGLDQSLKQILRNG---CKWISTFDSSSST 644



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/373 (24%), Positives = 165/373 (44%), Gaps = 26/373 (6%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCK 197
            +EM      P+  + N V+D L K G+V    D+  K+++    PN +++   +   C 
Sbjct: 259 LNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCL 318

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIA-------------------E 238
           L+++     V   MV KG  PNV  +  L+N +CK+ RI                    E
Sbjct: 319 LSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDE 378

Query: 239 AYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIK 298
           A ++   M+  G   +V ++  LI+G+ +++R+D A YL+ +M +    P+ VTY++LI 
Sbjct: 379 AVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIH 438

Query: 299 GFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP 358
           G    +    A +    + +    P+LV + +L+D L K     +A+ +   +    L P
Sbjct: 439 GLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDP 498

Query: 359 DSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLY 415
           D       +  +C +G       L   L    ++ D+  Y+ +++  C+ G  ++A KL+
Sbjct: 499 DIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLF 558

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
             M + G T +   +  + RG     +   AI + Q +V    + +A   T  V  L + 
Sbjct: 559 REMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDD 618

Query: 476 GRCHKAIQLFRRA 488
           G      Q+ R  
Sbjct: 619 GLDQSLKQILRNG 631



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 99/445 (22%), Positives = 179/445 (40%), Gaps = 26/445 (5%)

Query: 182 LPNFLSF--NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEA 239
           LP+FLS   N         N +         M+R    P+   F  LL    KM   +  
Sbjct: 21  LPHFLSLSHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTL 80

Query: 240 YQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG 299
             L   M + G   ++    +LI+ F  L R+  A  +  K+++ G  P+  T+T+LI+G
Sbjct: 81  LSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRG 140

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
                    A    D +  EG  PD+V +  LI+ L K+G+   A+ +   +++    P+
Sbjct: 141 ICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPN 200

Query: 360 SYTFCSLLSTVC----LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLY 415
            + + +++ ++C    ++  F+L  ++V    +  D+  YN+L+   C          L 
Sbjct: 201 VFAYNTIIDSLCKDRQVTEAFNLFSEMVTK-GISPDIFTYNSLIHALCNLCEWKHVATLL 259

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
           N M+D    PD  SF  ++  LC   K+ EA +V   ++      N   +TA++D     
Sbjct: 260 NEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLL 319

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT-------------------EEA 516
               +A+++F   + +    +V+SY   I G  +  R                    +EA
Sbjct: 320 SEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEA 379

Query: 517 YILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKF 576
             ++  M      PN  +Y  ++  +CK + I     L  ++    +  D  T   L   
Sbjct: 380 VKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHG 439

Query: 577 IFKFHSSSSAVNQLVEMCNLGLIPD 601
           +        A+    EM     IP+
Sbjct: 440 LCHVERLQDAIALFHEMVACSQIPN 464



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/267 (22%), Positives = 122/267 (45%), Gaps = 14/267 (5%)

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
            +M S+   FL +  +  H+  L F+ +           D A+  ++ +L ++  P +  
Sbjct: 15  TQMLSLLPHFLSLSHNRFHSKSLHFNTI-----------DGAISSFNRMLRMQPPPSTVD 63

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
           F  LL+++      S L  L   ++   +  ++   + L++ FC       A  +   +L
Sbjct: 64  FNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKIL 123

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
             G  PD  +F  L+RG+C   KI EA++++  ++      +   +  +++ L + G   
Sbjct: 124 KLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTS 183

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
            AI+L    + +    +V +Y   I  L +  +  EA+ L+S+M    + P+ +TY  ++
Sbjct: 184 AAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLI 243

Query: 540 LSFCKERNIKMVKRLLQDVIDARIELD 566
            + C     K V  LL +++D++I  D
Sbjct: 244 HALCNLCEWKHVATLLNEMVDSKIMPD 270



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 107/237 (45%), Gaps = 9/237 (3%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG 173
           GC+    ++   +  Y + +     +  F EM R    P+T   + ++  L  + R+   
Sbjct: 390 GCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDA 449

Query: 174 IKVLKE----TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
           I +  E    +Q+PN +++ I L  LCK   ++    ++  +      P++++  I ++ 
Sbjct: 450 IALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDG 509

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
            C+ G +  A  L   + + G    V  ++++I+G  R   LD A  L+ +M +NGC+ N
Sbjct: 510 MCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLN 569

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALD 346
              Y ++ +GF+     S A   L  + + G + D     + +  LS     DD LD
Sbjct: 570 GCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLS-----DDGLD 621


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 177/356 (49%), Gaps = 7/356 (1%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR      ++ E+ R  CV    T+ + L    +   Y   ++  DEM   G TP+    
Sbjct: 172 GRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTY 231

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N+V++ + + GRVD  I+ LK        PN +S+NI L  LC      + ++++G M +
Sbjct: 232 NVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQ 291

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           KG  PNV  F +L++  C+ G +  A ++L  +   G + +  ++  L+  F + +++D 
Sbjct: 292 KGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDK 351

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A    + MV  GC P++V+Y +L+     +    +A   L  L+ +G AP L+ +N +ID
Sbjct: 352 AMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVID 411

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEA 390
            L+K G   +AL++ + ++   L PD  T+ ++ + +C   R     +    V  + +  
Sbjct: 412 GLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRP 471

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
           + V+YNA++   CK    + A+ L+  M+  G  P+  ++  L+ GL     I EA
Sbjct: 472 NTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEA 527



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/397 (23%), Positives = 180/397 (45%), Gaps = 33/397 (8%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGM 210
           P+  A N ++      G++D   +++ E  + P+  ++N  +  LC     +N   V+  
Sbjct: 124 PDVMAYNAMVAGYCGAGQLDAARRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDE 183

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M+R+   P+V  + ILL   CK     +A +LL  M   G +  +  + V+++G  +  R
Sbjct: 184 MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 243

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           +D A    + +   GC PN V+Y  ++KG   A+ +  A   +  +  +G  P++V  N+
Sbjct: 244 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 303

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA 390
           LI  L + G  + AL+V + + +    P+S +                            
Sbjct: 304 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLS---------------------------- 335

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
               YN LL  FCK    ++A+   + M+ +G  PD  S+  LL  LC + ++D A+ + 
Sbjct: 336 ----YNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELL 391

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
             +     A     +  ++D L +AG+  +A++L    + +    D+++Y+    GL   
Sbjct: 392 HQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCRE 451

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN 547
            R E+A   + +++ + + PN   Y  ++L  CK R 
Sbjct: 452 DRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRE 488



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 92/390 (23%), Positives = 184/390 (47%), Gaps = 10/390 (2%)

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT--VLIDGFRRLRRLDMAG 275
           P+V  +  ++  +C  G++  A +L+  M      +  +A+T   LI G     R   A 
Sbjct: 124 PDVMAYNAMVAGYCGAGQLDAARRLVAEM-----PVEPDAYTYNTLIRGLCGRGRTANAL 178

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
            + ++M++  C P+VVTYT L++   +   +  A   LD +  +G  PD+V +NV+++ +
Sbjct: 179 AVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGI 238

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DL 392
            + G  DDA++    L      P++ ++  +L  +C + R+    +L+  +  +    ++
Sbjct: 239 CQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNV 298

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           V +N L+S+ C+ G    A+++   +   G TP++ S+  LL   C  +K+D+A+     
Sbjct: 299 VTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDL 358

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           +V      +   +  ++  L  +G    A++L  +   +     ++SY   I GL + G+
Sbjct: 359 MVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGK 418

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
           T+EA  L ++M    + P+  TY  +    C+E  I+   R    V D  I  +      
Sbjct: 419 TKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNA 478

Query: 573 LTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
           +   + K   + SA++    M   G +P+E
Sbjct: 479 IILGLCKRRETHSAIDLFAYMIGNGCMPNE 508



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 62/266 (23%), Positives = 121/266 (45%), Gaps = 4/266 (1%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           R+E    ++GE+ + GC     TF + +    R  +    LE  +++ ++G TPN+ + N
Sbjct: 278 RWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYN 337

Query: 159 IVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
            ++    K  ++D  +  L         P+ +S+N  L  LC+  +V    +++  +  K
Sbjct: 338 PLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDK 397

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           G  P +  +  +++   K G+  EA +LL  M++ G    +  ++ +  G  R  R++ A
Sbjct: 398 GCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDA 457

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
              + K+   G  PN V Y ++I G  + +    A      +   G  P+   + +LI+ 
Sbjct: 458 IRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEG 517

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDS 360
           L+  G   +A D+ D L    +V  S
Sbjct: 518 LAYEGLIKEARDLLDELCSRGVVRKS 543



 Score = 46.6 bits (109), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 57/138 (41%), Gaps = 12/138 (8%)

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           PD  +   L++ L  + +  EA  V      +  A NA V          AG C      
Sbjct: 94  PDAGTCAALIKKLSASGRTAEARRVLAACGPDVMAYNAMV----------AGYCGAGQLD 143

Query: 485 FRRAIVEKYPL--DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
             R +V + P+  D  +Y   IRGL   GRT  A  +  +M      P+  TY ++L + 
Sbjct: 144 AARRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEAT 203

Query: 543 CKERNIKMVKRLLQDVID 560
           CK    K   +LL ++ D
Sbjct: 204 CKRSGYKQAMKLLDEMRD 221


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/500 (23%), Positives = 217/500 (43%), Gaps = 6/500 (1%)

Query: 83  VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF 142
           V+ ++H++  +     +F+ +  +   + + G +    T+ + L+   + +      + F
Sbjct: 144 VRIYNHLLDALLS-ENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLF 202

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVS 202
            EM   G  P+      ++  L K G++D   + L     P+   +N  +  +CK   + 
Sbjct: 203 VEMSNKGCPPDAVTYTTMVSSLCKAGKID-DARELAGRFKPSVPVYNALIDGMCKEGRIE 261

Query: 203 NVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLI 262
               ++G M+  G  PNV  +  ++N  C  G +  A+ L   M   G   +++ +T LI
Sbjct: 262 VAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLI 321

Query: 263 DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
            G     +L  A  LW+ M+Q+GC PNVV Y +LI G         A    D ++  G  
Sbjct: 322 KGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCL 381

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL 382
           P++  +++LID  +K G    A + ++ ++     P+  T+  ++  +C +  F     L
Sbjct: 382 PNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSL 441

Query: 383 VCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
           V  + +E    + + +N  +   C  G    A+KL   M   G  P+  ++  LL  L  
Sbjct: 442 VEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFR 501

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
             K +EA  ++Q I   N   N   +  ++     AG   +A+QLF +A+V     D ++
Sbjct: 502 MNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSIT 561

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAV-PPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           Y   I    + G+ + A  L  ++  +    P+  TY  ++   C   NI+     L   
Sbjct: 562 YNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKA 621

Query: 559 IDARIELDYHTSIRLTKFIF 578
           I+  I  ++ T   L +  F
Sbjct: 622 INQGICPNFATWNALVRCFF 641



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 139/615 (22%), Positives = 238/615 (38%), Gaps = 110/615 (17%)

Query: 67  LSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFL 126
           L FF   A    + H   ++  MI  + R     + V+ I+ ++   G       F+  +
Sbjct: 58  LGFFSAIANSNAFQHTASTYRVMIERLGR-ECEMDMVQYILQQMKMDGINCCEDLFICII 116

Query: 127 RIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFL 186
             Y R       L+ F  +G FG  P     N ++D L    +           Q+ N L
Sbjct: 117 NGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKF----------QMINPL 166

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
             N                     M + G  PNV  + ILL   CK  R+  A++L   M
Sbjct: 167 YTN---------------------MKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEM 205

Query: 247 ------------ITLGTSL------------------SVNAWTVLIDGFRRLRRLDMAGY 276
                        T+ +SL                  SV  +  LIDG  +  R+++A  
Sbjct: 206 SNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIK 265

Query: 277 LWEKMVQNGCSPNVVTY-----------------------------------TSLIKG-F 300
           L  +M+ NG  PNVV+Y                                   T LIKG F
Sbjct: 266 LLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCF 325

Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
           M  K++  A     ++  +G  P++V +N LI  L   GS ++AL V D +     +P+ 
Sbjct: 326 MRGKLYE-ALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNV 384

Query: 361 YTFCSLLSTVCLSGRF---SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
            T+  L+     SG     S     +       ++V Y  ++   CK    +QA  L   
Sbjct: 385 TTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEK 444

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           M  +G TP+  +F   ++GLCG  +++ A+ + + +  +    N   +  ++D L    +
Sbjct: 445 MTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNK 504

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
             +A  LF+         ++V+Y   + G    G   EA  L+ +       P++ TY  
Sbjct: 505 YEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNT 564

Query: 538 MLLSFCKERNIKMVKRLLQDVIDARIELDYHTS-IRLTKFIF---KFHSSSSAVNQLVEM 593
           M+ ++CK+  +K+  +L++ V   +   ++H   I  T  I+    + +   A+  L + 
Sbjct: 565 MIHAYCKQGKVKIAAQLVERVSSMK---EWHPDIITYTSLIWGACNWMNIEEAMAFLDKA 621

Query: 594 CNLGLIPD-EMWRKL 607
            N G+ P+   W  L
Sbjct: 622 INQGICPNFATWNAL 636



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 106/420 (25%), Positives = 175/420 (41%), Gaps = 46/420 (10%)

Query: 98  GRFETVRGIVGELARVG---------CVIKAQ--------TFLLFLRIYWRGEMYGMVLE 140
           GR E    ++GE+   G         C+I +          F LF +++ RG        
Sbjct: 258 GRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRG-------- 309

Query: 141 AFDEMGRFGFTP---NTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCK 197
              +     FTP     F R  + + L      DL   ++++   PN +++N  +  LC 
Sbjct: 310 --CDANIHTFTPLIKGCFMRGKLYEAL------DLWKLMIQDGCEPNVVAYNTLIHGLCS 361

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              +     V   M R G  PNV  + IL++ F K G +  A +    MI+ G   +V  
Sbjct: 362 NGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVT 421

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T ++D   +    D A  L EKM   GC+PN +T+ + IKG         A   L+ ++
Sbjct: 422 YTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQ 481

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G  P++  +N L+D L +M  Y++A  ++  +    L P+  T+ ++L     +G   
Sbjct: 482 GHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMG 541

Query: 378 LLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLD-KGFTPDNYSFVGL 433
              +L     V     D + YN ++  +CK G    A +L   +   K + PD  ++  L
Sbjct: 542 EALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSL 601

Query: 434 LRGLCGARKIDEAI-----NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
           + G C    I+EA+      + QGI  N    NA V     D L   G  H    + R+ 
Sbjct: 602 IWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVR-CFFDSLGHMGPIHILDDILRKG 660


>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g07290, mitochondrial; Flags: Precursor
 gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
 gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 880

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/404 (26%), Positives = 198/404 (49%), Gaps = 13/404 (3%)

Query: 180 TQLPNFLSFNI---ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
           T  PN +S++I    LC + +L +   +KD +G    KG  P+ R + +L+   C  G I
Sbjct: 261 TCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMG---EKGCQPSTRTYTVLIKALCDRGLI 317

Query: 237 AEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSL 296
            +A+ L   MI  G   +V+ +TVLIDG  R  +++ A  +  KMV++   P+V+TY +L
Sbjct: 318 DKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNAL 377

Query: 297 IKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
           I G+ +      AF  L ++E     P++   N L++ L ++G    A+ +   +L+  L
Sbjct: 378 INGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGL 437

Query: 357 VPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVK 413
            PD  ++  L+  +C  G  +   KL+  +   ++E D + + A+++ FCK G  + A  
Sbjct: 438 SPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASA 497

Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
               ML KG + D  +   L+ G+C   K  +A+ + + +V        H    I+D L 
Sbjct: 498 FLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLS 557

Query: 474 EAGRCHKAIQLFRRAIVEKYPL--DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
           +  +  + + +  +  + K  L   VV+YT  + GL+  G    ++ +   MK     PN
Sbjct: 558 KGCKVKEELAMLGK--INKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPN 615

Query: 532 AYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTK 575
            Y Y +++   C+   ++  ++LL  + D+ +  ++ T   + K
Sbjct: 616 VYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVK 659



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 98/419 (23%), Positives = 201/419 (47%), Gaps = 9/419 (2%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR E   G+  ++   GC    +T+ + ++      +       FDEM   G  PN    
Sbjct: 280 GRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTY 339

Query: 158 NIVMDVLFKIGRVDL--GI--KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
            +++D L + G+++   G+  K++K+   P+ +++N  +   CK   V    +++ +M +
Sbjct: 340 TVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEK 399

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +   PNVR F  L+   C++G+  +A  LL  M+  G S  + ++ VLIDG  R   ++ 
Sbjct: 400 RACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNT 459

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L   M      P+ +T+T++I  F +     +A +FL ++  +G + D V    LID
Sbjct: 460 AYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLID 519

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTF---CSLLSTVC-LSGRFSLLPKLVCGLEVE 389
            + K+G   DAL + + L++++++   ++      +LS  C +    ++L K +  L + 
Sbjct: 520 GVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGK-INKLGLV 578

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
             +V Y  L+    ++G    + ++   M   G  P+ Y +  ++ GLC   +++EA  +
Sbjct: 579 PSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKL 638

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
              +  +  + N   +T +V   +  G+  +A++  R  +   Y L+   Y+  ++G +
Sbjct: 639 LSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFV 697



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 122/529 (23%), Positives = 207/529 (39%), Gaps = 88/529 (16%)

Query: 65  IALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLL 124
           I + FF+W  K   Y  D    + ++ ++   +G +     ++  L +     + +   L
Sbjct: 85  ICVRFFMWVCKHSSYCFDPTQKNQLLKLIVS-SGLYRVAHAVIVALIKECSRCEKEMLKL 143

Query: 125 FLRIYWRGEMYGMVLEAFDEMGR-FGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP 183
                    MY      FDE+   FGF  N    +    +L  + ++DLG          
Sbjct: 144 ---------MY-----CFDELREVFGFRLNYPCYS---SLLMSLAKLDLG---------- 176

Query: 184 NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
            FL++            V+  +     M   GF   +  +  ++N  CK G    A   +
Sbjct: 177 -FLAY------------VTYRR-----MEADGFVVGMIDYRTIVNALCKNGYTEAAEMFM 218

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN-GCSPNVVTYTSLIKGFME 302
             ++ +G  L  +  T L+ GF R   L  A  +++ M +   C+PN V+Y+ LI G  E
Sbjct: 219 SKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCE 278

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
                 AF   D +  +G  P    + VLI  L   G  D A +++D ++     P+ +T
Sbjct: 279 VGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHT 338

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGLEVE----ADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           +  L+  +C  G+       VC   V+      ++ YNAL++ +CK G    A +L   M
Sbjct: 339 YTVLIDGLCRDGKIEE-ANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVM 397

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
             +   P+  +F  L+ GLC                                     G+ 
Sbjct: 398 EKRACKPNVRTFNELMEGLC-----------------------------------RVGKP 422

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
           +KA+ L +R +      D+VSY V I GL   G    AY L S M    + P+  T+  +
Sbjct: 423 YKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAI 482

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAV 587
           + +FCK+    +    L  ++   I LD  T   L   + K   +  A+
Sbjct: 483 INAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDAL 531



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 92/374 (24%), Positives = 156/374 (41%), Gaps = 51/374 (13%)

Query: 289 NVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVY 348
           N   Y+SL+    +  +  +A+     +E++G    ++ +  +++ L K G  + A    
Sbjct: 159 NYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFM 218

Query: 349 DGLLELKLVPDSYTFCSLLSTVC--LSGRFSLLPKLVCGLEVEA--DLVVYNALLSYFCK 404
             +L++  V DS+   SLL   C  L+ R +L    V   EV    + V Y+ L+   C+
Sbjct: 219 SKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCE 278

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV 464
            G   +A  L + M +KG  P   ++  L++ LC    ID+A N++  ++      N H 
Sbjct: 279 VGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHT 338

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
           +T ++D L   G+  +A  + R+ + ++    V++Y   I G  + GR   A+ L + M+
Sbjct: 339 YTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVME 398

Query: 525 HIAVPPNAYT-----------------------------------YRVMLLSFCKERNIK 549
             A  PN  T                                   Y V++   C+E ++ 
Sbjct: 399 KRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMN 458

Query: 550 MVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGL 609
              +LL  +    IE D  T    T  I  F     A    V    LGL    M RK G+
Sbjct: 459 TAYKLLSSMNCFDIEPDCLT---FTAIINAFCKQGKAD---VASAFLGL----MLRK-GI 507

Query: 610 LSDETMTPVSLFDG 623
             DE +T  +L DG
Sbjct: 508 SLDE-VTGTTLIDG 520



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 93/443 (20%), Positives = 161/443 (36%), Gaps = 97/443 (21%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNV 204
           G +P+  + N+++D L + G ++   K+L         P+ L+F   +   CK       
Sbjct: 436 GLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVA 495

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGR----------------------------- 235
              +G+M+RKG   +      L++  CK+G+                             
Sbjct: 496 SAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDM 555

Query: 236 ------IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
                 + E   +LG +  LG   SV  +T L+DG  R   +  +  + E M  +GC PN
Sbjct: 556 LSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPN 615

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
           V  YT +I G  +      A   L  ++  G +P+ V + V++      G  D AL+   
Sbjct: 616 VYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVR 675

Query: 350 GLLELKLVPDSYTFCSLL---------------STV------------------------ 370
            ++E     +   + SLL               STV                        
Sbjct: 676 AMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLG 735

Query: 371 -CLSGRFSLLPKLVC--GLEVEADLVVYNAL-------------LSYFCKAGFPNQAVKL 414
            C+SG    L   +C  G   E++ +V N L             +  +C      + ++L
Sbjct: 736 GCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKAMDIIMESYCSKKKHTKCMEL 795

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
              +L  GF P   SF  +++GL      + A  +   ++ +N  V        V+ L+E
Sbjct: 796 ITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSGVLTYVECLME 855

Query: 475 A---GRCHKAIQLFRRAIVEKYP 494
               G C + I L  +    + P
Sbjct: 856 GDETGDCSEVIDLVDQLHCRERP 878


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 136/529 (25%), Positives = 221/529 (41%), Gaps = 69/529 (13%)

Query: 11  YTAQRTQILKTIISFKSIHQISSPKVCATTHQDFPIILAPHIVHSTLLNCPSDLIALSFF 70
           YT   +    T    + I +    K+     +  P  L  H+ +S       DLI L +F
Sbjct: 39  YTTPNSHTFDTPTISQLIAKQHWSKLKTIVKETNPSSLLQHLFNS---EAQPDLI-LCYF 94

Query: 71  IWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARV----------------- 113
            W  K+    H+V+ F  ++ ++      +  +R ++   A+                  
Sbjct: 95  KWTQKEFGAIHNVEQFCRLLHLLAN-AKNYNKIRALLDSFAKNAHYSNSTIFHSLSVLGS 153

Query: 114 -GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDL 172
            GC       +L       GEM  + LE FD  G +GF  +  + N ++  L K GR+ +
Sbjct: 154 WGCANSIIVDMLVWAYVKNGEM-DLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGV 212

Query: 173 GIKVLKETQLP----NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLN 228
              V KE        N ++F++ +  LCK+       DV+  M   GF P+V  +  +++
Sbjct: 213 VESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIID 272

Query: 229 CFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLR------------------- 269
            +CK G++ +A  LL  M+      +   + +LIDGF R                     
Sbjct: 273 GYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQP 332

Query: 270 ----------------RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
                           +LD A  L +KM   G  PNVVTY +LI GF + KM   A   L
Sbjct: 333 NVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREML 392

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           D +   G AP+++  N LID   K G  DDA  +   +L+  + P+  T+  L+   C  
Sbjct: 393 DDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCRE 452

Query: 374 GRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTML---DKGFTPDN 427
           G      KL   +E   ++ADLV YN L+   CK G   +AV+L + M     KG   + 
Sbjct: 453 GNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANI 512

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
            ++  L++G C   K++EA  +   ++      N   +  + D ++E G
Sbjct: 513 VTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKG 561



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/330 (23%), Positives = 153/330 (46%), Gaps = 12/330 (3%)

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
           L   D AG    ++    C+P +V   SL+K   E ++  +   + +M+       ++V 
Sbjct: 179 LEGFDRAGDYGFRLSALSCNPMLV---SLVK---EGRIGVVESVYKEMIRRR-IGVNVVT 231

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF----SLLPKLV 383
            +V+I+ L K+G +  A DV + +      P   T+ +++   C +G+     +LL ++V
Sbjct: 232 FDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMV 291

Query: 384 CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
               +  + + +N L+  FC+      A K++  M  +G  P+  ++  L+ GLC   K+
Sbjct: 292 AK-RIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKL 350

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           DEA+ +   +       N   + A+++   +     +A ++           +V+++   
Sbjct: 351 DEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTL 410

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           I    + GR ++A++L S M    V PN  TY  +++ FC+E N+K  ++L +++    +
Sbjct: 411 IDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGL 470

Query: 564 ELDYHTSIRLTKFIFKFHSSSSAVNQLVEM 593
           + D  T   L   + K   +  AV  L EM
Sbjct: 471 KADLVTYNILVDALCKKGETRKAVRLLDEM 500



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 70/319 (21%), Positives = 128/319 (40%), Gaps = 50/319 (15%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLT--------GRFETVRGIVGELARVGCVIKAQTFLLFL 126
           K  D   D++++    SV+T  T        G+      ++ E+          TF + +
Sbjct: 247 KAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILI 306

Query: 127 RIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----L 182
             + R E      + F+EM R G  PN    N +++ L   G++D  + +  +       
Sbjct: 307 DGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLK 366

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           PN +++N  +   CK   +   ++++  + ++G  PNV  F  L++ + K GR+ +A+ L
Sbjct: 367 PNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLL 426

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSP-------------- 288
             +M+  G   +V+ +  LI GF R   +  A  L ++M  NG                 
Sbjct: 427 RSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCK 486

Query: 289 ------------------------NVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
                                   N+VTY  LIKGF        A   L+ +  +G  P+
Sbjct: 487 KGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPN 546

Query: 325 LVFHNVLIDCLSKMGSYDD 343
              +++L D + + G   D
Sbjct: 547 RTTYDILRDEMMEKGFIPD 565



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/294 (21%), Positives = 125/294 (42%), Gaps = 20/294 (6%)

Query: 285 GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH-APDLVFHN------------VL 331
           G   NV  +  L+     AK ++   + LD      H +   +FH+            ++
Sbjct: 102 GAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSLSVLGSWGCANSII 161

Query: 332 IDCLS----KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP---KLVC 384
           +D L     K G  D AL+ +D   +      + +   +L ++   GR  ++    K + 
Sbjct: 162 VDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMI 221

Query: 385 GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
              +  ++V ++ +++  CK G   +A  +   M   GF+P   ++  ++ G C A K+ 
Sbjct: 222 RRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMF 281

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
           +A  + + +V      N      ++D          A ++F     +    +VV+Y   I
Sbjct: 282 KADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLI 341

Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
            GL   G+ +EA  L  +M  + + PN  TY  ++  FCK++ +K  + +L D+
Sbjct: 342 NGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDI 395


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 116/495 (23%), Positives = 217/495 (43%), Gaps = 7/495 (1%)

Query: 117 IKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV 176
           +   T  + +  Y +   +G V     EM +    P+    N+++D  F+ G V+  + +
Sbjct: 157 VNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMAL 216

Query: 177 L----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCK 232
           +     +   P  +++N  L  L +       ++V   M   G  P+VR F +L+  FC+
Sbjct: 217 IDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCR 276

Query: 233 MGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVT 292
            G + EA +    M     +  V +++ LI  F R   +D A     +M + G  P+ V 
Sbjct: 277 AGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVI 336

Query: 293 YTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
           YT +I GF  A +   A    D + + G  PD+V +N L++ L K     DA ++ + + 
Sbjct: 337 YTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMK 396

Query: 353 ELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPN 409
           E  + PD  TF +L+   C  G      +    +    +  D+V YN L+   C+ G   
Sbjct: 397 ERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLG 456

Query: 410 QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
           +A +L++ M  +   P++ ++  L+   C   ++D A      +V      N   + +I+
Sbjct: 457 KANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSII 516

Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
                +G   K  Q   +   +K   D+++Y   I G ++ G+  EA+ L   M++  V 
Sbjct: 517 KGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQ 576

Query: 530 PNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQ 589
           P+A TY +++  F    N++    + + +    IE D +T + +        +S  +   
Sbjct: 577 PDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQL 636

Query: 590 LVEMCNLGLIPDEMW 604
             EM   GL PD+ +
Sbjct: 637 HDEMLQKGLAPDDKF 651



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/372 (26%), Positives = 169/372 (45%), Gaps = 28/372 (7%)

Query: 82  DVQSFDHMISVVTRLTGRFETV---------RGIVGELARVGCVIKAQTFLLFLRIYWRG 132
           DV+SF+ +I    R  G  E           R +  ++    C+I      LF R   RG
Sbjct: 263 DVRSFNMLIGGFCR-AGELEEALRFYKEMRGRRVTPDVVSFSCLIG-----LFTR---RG 313

Query: 133 EMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSF 188
           EM     E   EM  FG  P+     +V+    + G +   ++V  E      LP+ +++
Sbjct: 314 EM-DHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTY 372

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           N  L  LCK   +S+ ++++  M  +G  P++  F  L++ +C+ G I +A Q    +  
Sbjct: 373 NTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISD 432

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
                 +  +  LIDG  R   L  A  LW+ M      PN VTY+ LI    E      
Sbjct: 433 QRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDN 492

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           AF+FLD + ++G  P+++ +N +I    + G+          +   K++PD  T+ +L+ 
Sbjct: 493 AFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIH 552

Query: 369 TVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
                G+    F+LL K++    V+ D V YN ++S F   G   +A  +Y  M  +G  
Sbjct: 553 GYVKEGKMHEAFNLL-KIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIE 611

Query: 425 PDNYSFVGLLRG 436
           PD Y+++ ++ G
Sbjct: 612 PDRYTYMSMING 623



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/396 (23%), Positives = 178/396 (44%), Gaps = 9/396 (2%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
            GR++  R +   +   G     ++F + +  + R       L  + EM     TP+  +
Sbjct: 242 NGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVS 301

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            + ++ +  + G +D   + L+E +    +P+ + + + +   C+   +     V   MV
Sbjct: 302 FSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMV 361

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
             G  P+V  +  LLN  CK  R+++A +LL  M   G    +  +T LI G+ R   ++
Sbjct: 362 AFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIE 421

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A   ++ +      P++VTY +LI G         A    D + S    P+ V +++LI
Sbjct: 422 KALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILI 481

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLVCGLEV 388
           D   + G  D+A    D ++   +VP+  T+ S++   C SG  S     LPK+    +V
Sbjct: 482 DSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHD-KV 540

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
             DL+ YN L+  + K G  ++A  L   M ++   PD  ++  ++ G      + EA  
Sbjct: 541 MPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADW 600

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           VY+ +       + + + ++++  + AG   K+ QL
Sbjct: 601 VYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQL 636



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 76/366 (20%), Positives = 163/366 (44%), Gaps = 7/366 (1%)

Query: 206 DVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF 265
           D++  ++     P  ++F++L+  + +  +  EA++   L++     +   A   L+   
Sbjct: 75  DIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAAL 134

Query: 266 RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL 325
            R     +    +  ++ +    N  T   ++  + +   F    + +  +E     PD+
Sbjct: 135 SRAGWPHLTADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDV 194

Query: 326 VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL--- 382
           V HNV++D   + G  + A+ + D ++   + P   T+ S+L  +  +GR+    ++   
Sbjct: 195 VTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRA 254

Query: 383 --VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
              CG  V  D+  +N L+  FC+AG   +A++ Y  M  +  TPD  SF  L+      
Sbjct: 255 MDACG--VAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRR 312

Query: 441 RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSY 500
            ++D A    + +       +  ++T ++     AG   +A+++    +      DVV+Y
Sbjct: 313 GEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTY 372

Query: 501 TVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
              + GL +  R  +A  L ++MK   VPP+  T+  ++  +C++ NI+   +    + D
Sbjct: 373 NTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISD 432

Query: 561 ARIELD 566
            R+  D
Sbjct: 433 QRLRPD 438


>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Cucumis sativus]
          Length = 822

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/435 (25%), Positives = 202/435 (46%), Gaps = 7/435 (1%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFL 186
           +G      +E F +M + G +PN    N +++ L + GR+D   ++ ++  +    PN  
Sbjct: 255 KGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLK 314

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           ++   +  L KLN    V  V+  M+  GF PNV +F  L++ +CKMG I  A ++  +M
Sbjct: 315 TYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVM 374

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
           I+   + +      L+ GF +  +++ A    E+++ +G S +     S++    +   +
Sbjct: 375 ISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRY 434

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
             AF F  M+ S    P  +   +L+  L K G + +A +++  LLE        T  +L
Sbjct: 435 HSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNAL 494

Query: 367 LSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           +  +C +G+     ++V  +    +  D + YNAL+  FC  G      +L   M  +G 
Sbjct: 495 IHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGI 554

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
            PD Y++  LLRGLC   K+D+AI ++     +    N H +  +++   +A R      
Sbjct: 555 QPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVEN 614

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           LF   + +K  L+ + Y + I+   + G    A  L   MK   + PN  TY  ++   C
Sbjct: 615 LFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVC 674

Query: 544 KERNIKMVKRLLQDV 558
               ++  K L+ ++
Sbjct: 675 NIGLVEDAKHLIDEM 689



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 124/474 (26%), Positives = 214/474 (45%), Gaps = 47/474 (9%)

Query: 170 VDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
           VD+   + ++   P+  + N  L +L K N+     +V  +M  +G  P+V  F  ++N 
Sbjct: 194 VDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVM-SEGACPDVFSFTNVINA 252

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
            CK G++  A +L   M  LG S +V  +  +I+G  +  RLD A  L EKM   G  PN
Sbjct: 253 LCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPN 312

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
           + TY +LI G ++   F      LD +   G  P++V  N LID   KMG+ + AL + D
Sbjct: 313 LKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKD 372

Query: 350 GLLELKLVPDSYTFCSLLSTVCLSGRF-----SLLPKLVCGLEVEADL------------ 392
            ++   + P S T  SL+   C S +      +L   L  GL +  D             
Sbjct: 373 VMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKF 432

Query: 393 ---------------------VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
                                ++   L+   CK G   +A +L+  +L+KG      +  
Sbjct: 433 RYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSN 492

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            L+ GLCGA K+ EA  + + ++     ++   + A++      G+     +L       
Sbjct: 493 ALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKR 552

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
               D+ +Y   +RGL   G+ ++A  L+ + K   +  N +TY +M+  +CK   I+ V
Sbjct: 553 GIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDV 612

Query: 552 KRLLQDVIDARIELDYHTSIRLTKFIFKFHSSS---SAVNQLVE-MCNLGLIPD 601
           + L  +++  ++EL+   SI +   I K H  +   +A  QL+E M + G++P+
Sbjct: 613 ENLFNELLSKKMELN---SI-VYNIIIKAHCQNGNVAAALQLLENMKSKGILPN 662



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 111/527 (21%), Positives = 202/527 (38%), Gaps = 91/527 (17%)

Query: 95  RLTGRFE-----TVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFG 149
           RL   FE     TV+G+   L   G +I     L F         +  V    DEM   G
Sbjct: 293 RLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNF---------FDKVNHVLDEMIGSG 343

Query: 150 FTPNTFARNIVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCKLNDVSNVK 205
           F PN    N ++D   K+G ++  +K+    + +   P  ++    +   CK + + + +
Sbjct: 344 FNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAE 403

Query: 206 DVI-----------------------------------GMMVRKGFYPNVRMFEILLNCF 230
           + +                                    MM+ + F P+  +  +L+   
Sbjct: 404 NALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGL 463

Query: 231 CKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNV 290
           CK G+  EA +L   ++  G+  S      LI G     +L  A  + ++M++ G   + 
Sbjct: 464 CKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDR 523

Query: 291 VTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDG 350
           +TY +LI GF         F   + +   G  PD+  +N L+  L  +G  DDA+ ++D 
Sbjct: 524 ITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDE 583

Query: 351 LLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAG- 406
                L+ + +T+  ++   C + R   +  L   L   ++E + +VYN ++   C+ G 
Sbjct: 584 FKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGN 643

Query: 407 ----------------FPN------------------QAVKLYNTMLDKGFTPDNYSFVG 432
                            PN                   A  L + M  +GF P+   +  
Sbjct: 644 VAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTA 703

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           L+ G C   ++D A + +  ++  N   N   +T ++D   + G   KA  L  +     
Sbjct: 704 LIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESG 763

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
              DVV+Y V   G  +    + A+ +  QM    +P +  TY  ++
Sbjct: 764 IVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLV 810



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/348 (23%), Positives = 145/348 (41%), Gaps = 44/348 (12%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTF-LLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
            G+      IV E+   G  +   T+  L L     G++ G      +EM + G  P+ +
Sbjct: 501 AGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEG-CFRLREEMTKRGIQPDIY 559

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
             N ++  L  +G++D  IK+  E +    + N  ++ I +   CK N + +V+++   +
Sbjct: 560 TYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNEL 619

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
           + K    N  ++ I++   C+ G +A A QLL                            
Sbjct: 620 LSKKMELNSIVYNIIIKAHCQNGNVAAALQLL---------------------------- 651

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
                  E M   G  PN  TY+SLI G     +   A   +D +  EG  P++V +  L
Sbjct: 652 -------ENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTAL 704

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---V 388
           I    K+G  D A   +  ++   + P+ +T+  ++   C  G       L+  ++   +
Sbjct: 705 IGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGI 764

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
             D+V YN L + FCKA   + A K+ + M  +G   D  ++  L+ G
Sbjct: 765 VPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHG 812



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/206 (22%), Positives = 93/206 (45%), Gaps = 4/206 (1%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           R E V  +  EL      + +  + + ++ + +       L+  + M   G  PN    +
Sbjct: 608 RIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYS 667

Query: 159 IVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
            ++  +  IG V+    L  ++ KE  +PN + +   +   CKL  +   +     M+  
Sbjct: 668 SLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISF 727

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
             +PN   + ++++ +CK+G + +A  LL  M   G    V  + VL +GF +   +D A
Sbjct: 728 NIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNA 787

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGF 300
             + ++M   G   + +TYT+L+ G+
Sbjct: 788 FKVCDQMATEGLPVDEITYTTLVHGW 813


>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1245

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 138/598 (23%), Positives = 244/598 (40%), Gaps = 63/598 (10%)

Query: 65  IALSFFIWCAKQR--DYFHDVQSF----------------DHMISVVTRLTGRFETVRGI 106
           +AL F  W  KQ   D  H VQ F                 H++  ++ ++G+   V G 
Sbjct: 52  LALKFLKWVVKQPGLDTDHIVQLFCITTHILVRARMYDPARHILKELSLMSGKSSFVFGA 111

Query: 107 VGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK 166
           +    R+ C      F + +R+Y R  M    LE F  MG +GF P+ +  N ++  + K
Sbjct: 112 LMATYRL-CNSNPSVFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVK 170

Query: 167 IGRVDLGI-----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
               D+ +     ++LK    P+  +FNI +  LC          ++  M + G+ P + 
Sbjct: 171 SCE-DVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIV 229

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            +  +L+ +CK GR   A +LL  M   G +  V  + +LI    R  R      L   M
Sbjct: 230 TYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDM 289

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
            +    PN VTY +L+ GF       IA   L+ + + G +P+ V  N LID     G++
Sbjct: 290 RKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNF 349

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNAL 398
            +AL ++  +    L+    ++  LL  +C +  F L       ++   V    + Y  +
Sbjct: 350 KEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 409

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC------GARKI--------- 443
           +   CK GF ++AV + N M   G  PD  ++  L+ G C       A++I         
Sbjct: 410 IDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGL 469

Query: 444 --------------------DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
                                E I +Y+ +++     +      +V  L +AG+  +A +
Sbjct: 470 SPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEE 529

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
             R    +    + VS+   I G    G   +A+ ++ +M  +   P  +TY  +L   C
Sbjct: 530 FMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLC 589

Query: 544 KERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           K  ++   ++ L+ + +    +D      L   + K  +   AV+   EM    ++PD
Sbjct: 590 KGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPD 647



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 101/485 (20%), Positives = 209/485 (43%), Gaps = 51/485 (10%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF--------DEMGRF 148
              F+  RG    + R G  +         RI + G + G+    F        +EM + 
Sbjct: 381 NAEFDLARGFYMRMKRNGVCVG--------RITYTGMIDGLCKNGFLDEAVVMLNEMSKD 432

Query: 149 GFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNV 204
           G  P+    + +++   ++GR+    ++  ++ +    PN + ++  + N C++  +   
Sbjct: 433 GIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKET 492

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
             +   M+ +G  P+   F +L+   CK G++AEA + +  M + G   +  ++  LI+G
Sbjct: 493 IRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLING 552

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
           +        A  ++++M + G  P   TY SL+KG  +      A  FL  L++   A D
Sbjct: 553 YGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVD 612

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVC 384
            V  N LI  + K G+ D A+ ++  +++  ++PDS+T+ SL+S +C  G+  +      
Sbjct: 613 TVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAK 672

Query: 385 GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
             E   +LV              PN+   +Y   +D  F    +       G    +++D
Sbjct: 673 EAEARGNLV--------------PNKV--MYTCFVDGMFKAGQWK-----AGFYFRQQMD 711

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
           + + + + +V  N         A++D     G+  K   L      +    ++ +Y + +
Sbjct: 712 K-LGLTRDVVTTN---------AMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILL 761

Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
            G  +      +++LY  M    + P+  T   ++L  C+   +++  ++L+  I   +E
Sbjct: 762 HGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVE 821

Query: 565 LDYHT 569
           +D HT
Sbjct: 822 VDRHT 826



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 100/463 (21%), Positives = 186/463 (40%), Gaps = 49/463 (10%)

Query: 142  FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ-LPNFLSFNIALCN-----L 195
            FDEM + G  P  F    ++  L K G +    K LK  Q +P   + +  +CN     +
Sbjct: 566  FDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVP--AAVDTVMCNTLITAM 623

Query: 196  CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
            CK  ++     + G MV++   P+   +  L++  C+ G+   A          G  +  
Sbjct: 624  CKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPN 683

Query: 256  NA-WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
               +T  +DG  +  +     Y  ++M + G + +VVT  ++I G+            L 
Sbjct: 684  KVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLF 743

Query: 315  MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
             + ++   P+L  +N+L+   SK      +  +Y  ++   ++PD  T  S++  +C S 
Sbjct: 744  EMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESN 803

Query: 375  RFSL----LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM------LDK--- 421
               +    L   +C   VE D   +N L+S  C  G  N A  + N M      LDK   
Sbjct: 804  MLEIGLKILKAFIC-RGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTC 862

Query: 422  --------------------------GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
                                      G +P++  ++GLL GLC    I  A  V + ++ 
Sbjct: 863  DAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIA 922

Query: 456  NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
            +         +A+V  L + G+  +A  L R  +  K    + S+T  +    + G   E
Sbjct: 923  HKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTE 982

Query: 516  AYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
            A  L   M +  +  +  +Y V++   C + ++ +   L +++
Sbjct: 983  ALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEM 1025



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 78/338 (23%), Positives = 139/338 (41%), Gaps = 46/338 (13%)

Query: 144  EMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLN 199
            +M + G T +    N ++D   ++G++    DL  ++  + Q PN  ++NI L    K  
Sbjct: 709  QMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRK 768

Query: 200  DVSNVKDVIGMMVRKGFYPNV-----------------------------------RMFE 224
             VS    +   M+  G  P+                                      F 
Sbjct: 769  HVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFN 828

Query: 225  ILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN 284
            +L++  C  G I  A+ ++ +M +LG SL  N    ++    R  R   +  +  +M + 
Sbjct: 829  MLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQ 888

Query: 285  GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
            G SP    Y  L+ G         AF   + + +    P  V  + ++  L+K G  D+A
Sbjct: 889  GISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEA 948

Query: 345  LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV-----CGLEVEADLVVYNALL 399
              +   +L++KLVP   +F +L+   C +G  +   +L      CGL++  DLV YN L+
Sbjct: 949  SLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKL--DLVSYNVLI 1006

Query: 400  SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
            +  C  G    A +L+  M   GF  +  ++  L+ G+
Sbjct: 1007 TGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALVGGI 1044



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 109/254 (42%), Gaps = 39/254 (15%)

Query: 82   DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
            D  + D ++SV+ R   RF+  R ++ E+++ G   +++ ++  L    R    G +  A
Sbjct: 858  DKNTCDAIVSVLNR-NHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCR---VGDIKTA 913

Query: 142  F---DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKL 198
            F   +EM      P   A + ++  L K G+ D    +L+                    
Sbjct: 914  FVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRS------------------- 954

Query: 199  NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
                        M++    P +  F  L++ FCK G + EA +L  +M   G  L + ++
Sbjct: 955  ------------MLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSY 1002

Query: 259  TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM-EAKMFSIAFSFLDMLE 317
             VLI G      + +A  L+E+M ++G   NV TY +L+ G + +   FS     L  L 
Sbjct: 1003 NVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALVGGILSQGTEFSGTDIILKDLL 1062

Query: 318  SEGHAPDLVFHNVL 331
            + G    + F++++
Sbjct: 1063 ARGFITAMSFNHMI 1076


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/454 (24%), Positives = 212/454 (46%), Gaps = 7/454 (1%)

Query: 155 FARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGM 210
           F  N ++  L K+      I   K+ +L    P+  +FNI +   C L  ++    V+  
Sbjct: 65  FEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAK 124

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           + + GF+P+      L+   C  G++ EA      +I  G  L   ++  LI+G  +   
Sbjct: 125 IFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGE 184

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
              A  +  K+      PNVV Y ++I    + K+   A      +  +   PD+V +  
Sbjct: 185 TRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTT 244

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---E 387
           LI     +G   +A+ +++ +L   + PD YTF  L+  +C  G       ++  +    
Sbjct: 245 LIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQG 304

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
           V++++V YN+L+  +      N+A  ++NTM  +G TPD  S+  ++ GLC  + +DEA+
Sbjct: 305 VDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAV 364

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
           N+++ +   + A N   + +++D L++ GR   A  L         P DV++Y+  +  L
Sbjct: 365 NLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDAL 424

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
            +  + ++A  L +++K   + PN YTY +++   CK   +K  + + QD++     LD 
Sbjct: 425 CKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDV 484

Query: 568 HTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
                +   + K      A++ + +M + G IPD
Sbjct: 485 KMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPD 518



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 108/434 (24%), Positives = 197/434 (45%), Gaps = 40/434 (9%)

Query: 136 GMVLEAF---DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSF 188
           G V EA    D++   GF  +  +   +++ L K G     ++VL++       PN + +
Sbjct: 148 GKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMY 207

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           N  + +LCK   V +  D+   M+ K  +P+V  +  L+     +GR+ EA  L   M+ 
Sbjct: 208 NTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLL 267

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
                 V  + +L+DG  +   +  A  +   M++ G   N+VTY SL+ G+   K  + 
Sbjct: 268 KNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENK 327

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A    + +   G  PD+  ++++I+ L K    D+A++++  +    + P++        
Sbjct: 328 ATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNT-------- 379

Query: 369 TVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
                                   V YN+L+    K G  + A  L N M ++G   D  
Sbjct: 380 ------------------------VTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVI 415

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
           ++  LL  LC   ++D+AI +   I       N + +T +VD L + GR   A  +++  
Sbjct: 416 TYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDL 475

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS-FCKERN 547
           +++ Y LDV  Y V + GL + G  +EA  L S+M+     P+A TY  ++ + F  ++N
Sbjct: 476 LIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKN 535

Query: 548 IKMVKRLLQDVIDA 561
            K VK L + ++  
Sbjct: 536 DKAVKLLREMIVQG 549



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/307 (23%), Positives = 161/307 (52%), Gaps = 7/307 (2%)

Query: 167 IGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
           +GR+   + +  +  L    P+  +FNI +  LCK  ++   ++V+ +M+++G   N+  
Sbjct: 252 VGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVT 311

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           +  L++ +  + +  +A  +   M   G +  V +++++I+G  + + +D A  L+++M 
Sbjct: 312 YNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMH 371

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
               +PN VTY SLI G ++    S A+  ++ + + G   D++ ++ L+D L K    D
Sbjct: 372 SKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVD 431

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALL 399
            A+ +   + +  + P+ YT+  L+  +C +GR      +   L ++    D+ +YN ++
Sbjct: 432 KAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMV 491

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
           +  CK G  ++A+ L + M D G  PD  ++  L+R L    K D+A+ + + +++   A
Sbjct: 492 NGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQGSA 551

Query: 460 VNAHVHT 466
           V +++ +
Sbjct: 552 VGSNISS 558



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 79/322 (24%), Positives = 139/322 (43%), Gaps = 37/322 (11%)

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
           ++N   P +  +  ++   ++   F  A SF   +E +   PDL   N+LI+C   +G  
Sbjct: 57  MRNPVQP-IFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHL 115

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSY 401
           + A  V   + +L   PD+ T  +L+  +CL+G+                          
Sbjct: 116 NFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKV------------------------- 150

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI--VMNNPA 459
                   +A+  ++ ++ KGF  D  S+  L+ GLC   +   A+ V + I  ++  P 
Sbjct: 151 -------REALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQP- 202

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            N  ++  I+D L +      A  L    IV++   DVV+YT  I G L  GR +EA  L
Sbjct: 203 -NVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGL 261

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK 579
           ++QM    + P+ YT+ +++   CKE  +K  + +L  +I   ++ +  T   L    F 
Sbjct: 262 FNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFL 321

Query: 580 FHSSSSAVNQLVEMCNLGLIPD 601
               + A      M   G+ PD
Sbjct: 322 VKQENKATFVFNTMARRGVTPD 343



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 4/221 (1%)

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           +   +AR G     Q++ + +    + +M    +  F EM      PNT   N ++D L 
Sbjct: 331 VFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLL 390

Query: 166 KIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
           K GR+    DL  ++    Q  + ++++  L  LCK + V     +I  +  +G  PN+ 
Sbjct: 391 KYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIY 450

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            + IL++  CK GR+ +A  +   ++  G  L V  + V+++G  +    D A  L  KM
Sbjct: 451 TYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKM 510

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
             NGC P+ VTY +L++   E      A   L  +  +G A
Sbjct: 511 EDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQGSA 551


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
            thaliana]
          Length = 1184

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/438 (24%), Positives = 204/438 (46%), Gaps = 20/438 (4%)

Query: 130  WRGEMYGMVLEAFDEMGRF-------------GFTPNTFARNIVMDVLFKIGRVDLG--- 173
            W    Y +V+    ++GR              G+TP+  + + V++   + G +D     
Sbjct: 687  WNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKL 746

Query: 174  IKVLKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCK 232
            I+V+K   L PN   +   +  LC++  ++  ++    M+R+G  P+  ++  L++ FCK
Sbjct: 747  IEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 806

Query: 233  MGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVT 292
             G I  A +    M +   +  V  +T +I GF ++  +  AG L+ +M   G  P+ VT
Sbjct: 807  RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 866

Query: 293  YTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
            +T LI G+ +A     AF   + +   G +P++V +  LID L K G  D A ++   + 
Sbjct: 867  FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 926

Query: 353  ELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPN 409
            ++ L P+ +T+ S+++ +C SG      KLV   E   + AD V Y  L+  +CK+G  +
Sbjct: 927  KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 986

Query: 410  QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
            +A ++   ML KG  P   +F  L+ G C    +++   +   ++    A NA    ++V
Sbjct: 987  KAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 1046

Query: 470  DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
             +         A  +++         D  +Y   ++G  +    +EA+ L+ +MK     
Sbjct: 1047 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFS 1106

Query: 530  PNAYTYRVMLLSFCKERN 547
             +  TY V++  F K + 
Sbjct: 1107 VSVSTYSVLIKGFLKRKK 1124



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 106/450 (23%), Positives = 208/450 (46%), Gaps = 8/450 (1%)

Query: 82   DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
            +V S++ +I  V +L GR +    ++  +   G      ++   +  Y R      V + 
Sbjct: 688  NVASYNIVIHFVCQL-GRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKL 746

Query: 142  FDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCK 197
             + M R G  PN++    ++ +L +I ++    +   +++++  LP+ + +   +   CK
Sbjct: 747  IEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 806

Query: 198  LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              D+         M  +   P+V  +  +++ FC++G + EA +L   M   G       
Sbjct: 807  RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 866

Query: 258  WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
            +T LI+G+ +   +  A  +   M+Q GCSPNVVTYT+LI G  +      A   L  + 
Sbjct: 867  FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 926

Query: 318  SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG--- 374
              G  P++  +N +++ L K G+ ++A+ +        L  D+ T+ +L+   C SG   
Sbjct: 927  KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 986

Query: 375  RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
            +   + K + G  ++  +V +N L++ FC  G      KL N ML KG  P+  +F  L+
Sbjct: 987  KAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 1046

Query: 435  RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            +  C    +  A  +Y+ +       +   +  +V    +A    +A  LF+    + + 
Sbjct: 1047 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFS 1106

Query: 495  LDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
            + V +Y+V I+G L+  +  EA  ++ QM+
Sbjct: 1107 VSVSTYSVLIKGFLKRKKFLEAREVFDQMR 1136



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 110/504 (21%), Positives = 212/504 (42%), Gaps = 38/504 (7%)

Query: 77   RDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFL-RIYWRGEMY 135
            +D+  D + FD    V+    G     R +  ++   G V+   +  ++L R+       
Sbjct: 612  KDWGSDPRVFDVFFQVLVDF-GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKT 670

Query: 136  GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIA 191
               +  F E    G   N  + NIV+  + ++GR+     +L   +L    P+ +S++  
Sbjct: 671  ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV 730

Query: 192  LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
            +   C+  ++  V  +I +M RKG  PN  ++  ++   C++ ++AEA +    MI  G 
Sbjct: 731  VNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 790

Query: 252  SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
                  +T LIDGF +   +  A   + +M     +P+V+TYT++I GF +      A  
Sbjct: 791  LPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK 850

Query: 312  FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
                +  +G  PD V    LI+   K G   DA  V++ +++    P+            
Sbjct: 851  LFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN------------ 898

Query: 372  LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
                                +V Y  L+   CK G  + A +L + M   G  P+ +++ 
Sbjct: 899  --------------------VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYN 938

Query: 432  GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
             ++ GLC +  I+EA+ +           +   +T ++D   ++G   KA ++ +  + +
Sbjct: 939  SIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK 998

Query: 492  KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
                 +V++ V + G    G  E+   L + M    + PNA T+  ++  +C   N+K  
Sbjct: 999  GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAA 1058

Query: 552  KRLLQDVIDARIELDYHTSIRLTK 575
              + +D+    +  D  T   L K
Sbjct: 1059 TAIYKDMCSRGVGPDGKTYENLVK 1082



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 89/391 (22%), Positives = 168/391 (42%), Gaps = 4/391 (1%)

Query: 214  KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR-LRRLD 272
            K +  + R+F++        G + EA ++   M+  G  LSV++  V +    +   +  
Sbjct: 612  KDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTA 671

Query: 273  MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
             A  ++ +  + G   NV +Y  +I    +      A   L ++E +G+ PD++ ++ ++
Sbjct: 672  TAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVV 731

Query: 333  DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVE 389
            +   + G  D    + + +    L P+SY + S++  +C   + +   +    +    + 
Sbjct: 732  NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 791

Query: 390  ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
             D VVY  L+  FCK G    A K +  M  +  TPD  ++  ++ G C    + EA  +
Sbjct: 792  PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 851

Query: 450  YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
            +  +       ++   T +++   +AG    A ++    I      +VV+YT  I GL +
Sbjct: 852  FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 911

Query: 510  GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
             G  + A  L  +M  I + PN +TY  ++   CK  NI+   +L+ +   A +  D  T
Sbjct: 912  EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 971

Query: 570  SIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
               L     K      A   L EM   GL P
Sbjct: 972  YTTLMDAYCKSGEMDKAQEILKEMLGKGLQP 1002



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/228 (23%), Positives = 106/228 (46%), Gaps = 4/228 (1%)

Query: 140  EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNL---- 195
            E   EM + G  PN F  N +++ L K G ++  +K++ E +     +  +    L    
Sbjct: 920  ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 979

Query: 196  CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
            CK  ++   ++++  M+ KG  P +  F +L+N FC  G + +  +LL  M+  G + + 
Sbjct: 980  CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 1039

Query: 256  NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
              +  L+  +     L  A  +++ M   G  P+  TY +L+KG  +A+    A+     
Sbjct: 1040 TTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQE 1099

Query: 316  LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
            ++ +G +  +  ++VLI    K   + +A +V+D +    L  D   F
Sbjct: 1100 MKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 1147



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 7/232 (3%)

Query: 136  GMVLEAFDEMGRF---GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSF 188
            G + EA   +G F   G   +T     +MD   K G +D   ++LKE       P  ++F
Sbjct: 948  GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 1007

Query: 189  NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
            N+ +   C    + + + ++  M+ KG  PN   F  L+  +C    +  A  +   M +
Sbjct: 1008 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 1067

Query: 249  LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
             G       +  L+ G  + R +  A +L+++M   G S +V TY+ LIKGF++ K F  
Sbjct: 1068 RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 1127

Query: 309  AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
            A    D +  EG A D    +   D   K    D  +D  D ++E  LV + 
Sbjct: 1128 AREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLVDEQ 1179



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 107/235 (45%), Gaps = 3/235 (1%)

Query: 370 VCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
           VC  GR      L+  +E++    D++ Y+ +++ +C+ G  ++  KL   M  KG  P+
Sbjct: 699 VCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPN 758

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
           +Y +  ++  LC   K+ EA   +  ++      +  V+T ++D   + G    A + F 
Sbjct: 759 SYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFY 818

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
                    DV++YT  I G  + G   EA  L+ +M    + P++ T+  ++  +CK  
Sbjct: 819 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAG 878

Query: 547 NIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           ++K   R+   +I A    +  T   L   + K     SA   L EM  +GL P+
Sbjct: 879 HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 933


>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
 gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
          Length = 465

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/466 (24%), Positives = 210/466 (45%), Gaps = 23/466 (4%)

Query: 112 RVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD 171
           R GC   + TF   +  + +    G      + M      PN  + N +++ L K+ R  
Sbjct: 3   RTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWH 62

Query: 172 LGIKVLKE------TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEI 225
              +++++         P+ ++++  L   CK   V   ++++  ++ +G  P+  M+  
Sbjct: 63  EAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTK 122

Query: 226 LLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
           ++   CK  R+ EA +LL  MI  G   ++  +  LI G  R + L+MA  L +KM  +G
Sbjct: 123 VVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASG 182

Query: 286 CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL 345
              +VVTY +L+ G  +A     A   L+ +++ G APD+V ++  +  L K G   DA 
Sbjct: 183 VKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAH 242

Query: 346 DVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV--------CGLEVEADLVVYNA 397
            V + + +    P+  T+ ++L  +C SG+     +++        CGL V    V Y+ 
Sbjct: 243 QVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNV----VGYST 298

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
           ++   CK G   +A  +   M   G  PD  ++  L+ GLC A KI+EA+   + + M  
Sbjct: 299 VVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEG 358

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLFRR-----AIVEKYPLDVVSYTVAIRGLLEGGR 512
              NA  + ++V  L   GR  +A ++              P  V +Y   I GL + GR
Sbjct: 359 CKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGR 418

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
            ++A   + +M+     P+  +Y  ++    +       + +L +V
Sbjct: 419 IDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEV 464



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 166/346 (47%), Gaps = 8/346 (2%)

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M R G  PN   F  L+N F K GR  +  +LL  M       +V ++  L++G  +L R
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 271 LDMAGYLWEKMVQNG--CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH 328
              A  L   M+  G   +P++VTY++L+ G+ +A     +   L  + S G  PD + +
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF----SLLPKLVC 384
             ++  L K     +AL++ + ++     P   TF +L+S  C         SLL K+  
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMA- 179

Query: 385 GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
              V+AD+V YN L+   CKAG   +A +L   M   G  PD  ++   + GLC + K+ 
Sbjct: 180 ASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVL 239

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR-AIVEKYPLDVVSYTVA 503
           +A  V + +  ++   N   +  I+D L ++G+   A+++  + A  +   L+VV Y+  
Sbjct: 240 DAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTV 299

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
           + GL + GRT+EA  +   M      P+  TY  ++   CK   I+
Sbjct: 300 VDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIE 345



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 62/281 (22%), Positives = 118/281 (41%), Gaps = 30/281 (10%)

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           M + GC PN VT+ +L+ GF +          L+ + +    P++V +N L++ L K+  
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLS 400
           + +A +         LV D          +   GR +             D+V Y+ LLS
Sbjct: 61  WHEAEE---------LVRD---------MISRGGRST------------PDMVTYSTLLS 90

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
            +CKAG   ++ +L   ++ +G  PD   +  ++  LC + ++ EA+ + + ++      
Sbjct: 91  GYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCP 150

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
                  ++           A  L ++        DVV+Y   + GL + GR +EA  L 
Sbjct: 151 TLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLL 210

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
            +MK     P+   Y   +   CK   +    ++L+ + D+
Sbjct: 211 ERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDS 251



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 92/211 (43%), Gaps = 2/211 (0%)

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           V +NAL++ F K G P    +L  TM  +   P+  S+ GLL GLC   +  EA  + + 
Sbjct: 11  VTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEELVRD 70

Query: 453 IVMNNPAVNAHV--HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
           ++         +  ++ ++    +AG+  ++ +L +  I      D + YT  +  L + 
Sbjct: 71  MISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKS 130

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
            R  EA  L  +M      P   T+  ++   C+E+N++M   LLQ +  + ++ D  T 
Sbjct: 131 ARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTY 190

Query: 571 IRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
             L   + K      A   L  M   G  PD
Sbjct: 191 NTLMDGLCKAGRLQEAEQLLERMKASGCAPD 221


>gi|293333312|ref|NP_001168014.1| uncharacterized protein LOC100381738 [Zea mays]
 gi|223945505|gb|ACN26836.1| unknown [Zea mays]
          Length = 462

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 114/441 (25%), Positives = 208/441 (47%), Gaps = 11/441 (2%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           ++E    ++ E+ R  C     TF   +R + +  +    +E  ++M ++G TP+    +
Sbjct: 22  QWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYS 81

Query: 159 IVMDVLFKIGRVDLGIKVLKETQL--PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
            +++   + GRVD  +K+L  T L  PN + +N AL  LC       V ++I  MVRK  
Sbjct: 82  TLVNGFSEHGRVDEALKLLN-TMLCRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDC 140

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
            PN   F  L+N  C+   +  A ++L  M   G    V ++  +I  F    R D A  
Sbjct: 141 PPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALK 200

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL-DMLESEGHAPDLVFHNVLIDCL 335
           L + M+   C P+ +++ +++K   +AK +  A   +  ML+ +    ++ F N+LID L
Sbjct: 201 LLKSML---CKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTF-NILIDSL 256

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVY 395
            + G   DA++V++ + + + +PD  T+ SL++     G   +   L   +   AD+  Y
Sbjct: 257 CQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMPCRADIFSY 316

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
           NA L   C A   + A +L   M+ +   P+  +F  L+  LC    ++ AI+VY+ +  
Sbjct: 317 NATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPK 376

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
                +   + A+++   E GR   A++       E    D +SY   ++GL    R ++
Sbjct: 377 YGITPDIFTYNALINGYSEQGRLDDALKFLSTMPCEP---DTISYNSILKGLCRAERWKD 433

Query: 516 AYILYSQMKHIAVPPNAYTYR 536
           A  L ++M      PN  T++
Sbjct: 434 AEKLVTEMLRKNCTPNEVTFK 454



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/336 (25%), Positives = 160/336 (47%), Gaps = 4/336 (1%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           + GR+E V  ++ E+ R  C     TF   +    +  +    +E  ++M ++G+ P+  
Sbjct: 121 IAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVV 180

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
           + N ++       R D  +K+LK     P+ +SFN  L  LCK     +  +++  M++K
Sbjct: 181 SYNTIISCFSDQARADDALKLLKSMLCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKK 240

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
               N   F IL++  C+ G++ +A ++  LM        +  ++ LI+GF      +MA
Sbjct: 241 DCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMA 300

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             L+  M    C  ++ +Y + +KG   A  +  A   +  + +E   P+ V  N+LI  
Sbjct: 301 FDLFRSM---PCRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISS 357

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVV 394
           L + G  + A+DVY+ + +  + PD +T+ +L++     GR     K +  +  E D + 
Sbjct: 358 LCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTMPCEPDTIS 417

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           YN++L   C+A     A KL   ML K  TP+  +F
Sbjct: 418 YNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 453



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 101/451 (22%), Positives = 183/451 (40%), Gaps = 87/451 (19%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+  ++N  L  LC        ++++  M+R   +PN   F   +  FC+ G +  A +L
Sbjct: 5   PDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVEL 64

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA---------------------------- 274
           L  M   G +  V  ++ L++GF    R+D A                            
Sbjct: 65  LEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCRPNTVCYNAALKGLCIAGR 124

Query: 275 ----GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
               G L  +MV+  C PN  T+++LI    + ++   A   L+ ++  G+ PD+V +N 
Sbjct: 125 WEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNT 184

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR--------------- 375
           +I C S     DDAL +   +L     PD+ +F ++L  +C + R               
Sbjct: 185 IISCFSDQARADDALKLLKSML---CKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKD 241

Query: 376 ---------------------------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFP 408
                                      F L+PK  C      D+V Y++L++ F + G  
Sbjct: 242 CRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCM----PDIVTYSSLINGFSEQGLD 297

Query: 409 NQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAI 468
             A  L+ +M  +    D +S+   L+GLC A + D+A  +   +V  +   N      +
Sbjct: 298 EMAFDLFRSMPCRA---DIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNIL 354

Query: 469 VDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAV 528
           +  L + G  ++AI ++ +        D+ +Y   I G  E GR ++A    S M     
Sbjct: 355 ISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTM---PC 411

Query: 529 PPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
            P+  +Y  +L   C+    K  ++L+ +++
Sbjct: 412 EPDTISYNSILKGLCRAERWKDAEKLVTEML 442



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 44/205 (21%), Positives = 82/205 (40%), Gaps = 35/205 (17%)

Query: 354 LKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVK 413
           + + PD+YT                                YN +L   C A    QA +
Sbjct: 1   MPVAPDTYT--------------------------------YNTVLKGLCCAKQWEQAEE 28

Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
           L   M+     P+  +F   +R  C    +D A+ + + +       +  +++ +V+   
Sbjct: 29  LMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFS 88

Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
           E GR  +A++L    +      + V Y  A++GL   GR EE   L ++M     PPN  
Sbjct: 89  EHGRVDEALKLLNTMLCRP---NTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDA 145

Query: 534 TYRVMLLSFCKERNIKMVKRLLQDV 558
           T+  ++ S C+ R ++    +L+ +
Sbjct: 146 TFSTLINSLCQNRLVEYAVEVLEQM 170


>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
 gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
          Length = 638

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 132/547 (24%), Positives = 236/547 (43%), Gaps = 46/547 (8%)

Query: 65  IALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVG-CVIKAQTFL 123
           + + FF W AK+R+Y HD  ++  +I  +  +  ++  +  ++ E+ R   CV+      
Sbjct: 105 VKMQFFRWAAKRRNYEHDTSTYMALIRCL-EVVEQYGEMWKMIQEMVRNPICVVTPTELS 163

Query: 124 LFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP 183
             +R+    +M    +  F ++      P   A N ++ +L   G+              
Sbjct: 164 EVVRMLGNAKMVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQY------------- 210

Query: 184 NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF-YPNVRMFEILLNCFCKMGRIAEAYQL 242
                               V ++   M  +G  +P+   +  L++ FCK+GR   A QL
Sbjct: 211 ------------------GKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSATQL 252

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           L  M   G   +   +T+LI  F +L  +  A  L+E+M    C P+V TYT LI+G  +
Sbjct: 253 LNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGK 312

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
           A     A+ F   ++ EG  PD V  N +I+ L K G  DDA+ ++  +  L+ +P   T
Sbjct: 313 AGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVT 372

Query: 363 FCSLLSTVCLS-GRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           + +++  +  S  R S +P     ++   +      Y+ L+  FCK     +A+ L   M
Sbjct: 373 YNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEM 432

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
            +KGF P   ++  L+  L  A++ D A  ++Q +  N  + +A V+  ++  L +AGR 
Sbjct: 433 DEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRL 492

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
             AI +F          DV +Y   + GL   G  +EA     +M+     P+  +Y ++
Sbjct: 493 DDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNII 552

Query: 539 LLSFCK----ERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMC 594
           L    K     R ++M+  + Q  +   + + Y+T +        F     A   + EM 
Sbjct: 553 LNGLAKTGGPHRAMEMLSNMKQSTVRPDV-VSYNTVLGALSHAGMFE---EAAKLMEEMN 608

Query: 595 NLGLIPD 601
            LG   D
Sbjct: 609 TLGFEYD 615



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/296 (20%), Positives = 133/296 (44%), Gaps = 10/296 (3%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D    ++MI+ + +  GR +    +  E+  + C+    T+   ++  +  +     + +
Sbjct: 334 DTVVMNNMINFLGK-AGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPS 392

Query: 142 -FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLND 200
            F+ M   G +P++F  +I++D   K  R++  + +L+E     F     A C+L  ++ 
Sbjct: 393 WFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSL--IDA 450

Query: 201 VSNVK------DVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           +   K      ++   +       + R++ +++    K GR+ +A  +   M  LG +  
Sbjct: 451 LGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPD 510

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           V A+  L+ G  R   LD A     +M ++GC P++ +Y  ++ G  +      A   L 
Sbjct: 511 VYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLS 570

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
            ++     PD+V +N ++  LS  G +++A  + + +  L    D  T+ S+L  +
Sbjct: 571 NMKQSTVRPDVVSYNTVLGALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSILEAI 626



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/212 (22%), Positives = 98/212 (46%), Gaps = 7/212 (3%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFL 186
           R E   M+LE  DE G   F P   A   ++D L K  R DL  ++ +E +      +  
Sbjct: 421 RMEKAMMLLEEMDEKG---FPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSAR 477

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
            + + + +L K   + +  ++   M + G  P+V  +  L++   + G + EA   +  M
Sbjct: 478 VYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRM 537

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
              G    +N++ ++++G  +      A  +   M Q+   P+VV+Y +++     A MF
Sbjct: 538 QEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMF 597

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
             A   ++ + + G   DL+ ++ +++ + K+
Sbjct: 598 EEAAKLMEEMNTLGFEYDLITYSSILEAIGKV 629


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 121/493 (24%), Positives = 206/493 (41%), Gaps = 50/493 (10%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFL 186
           R + Y  VL  + +M  FG   NT+  NI+++    + R+     VL    K    P+  
Sbjct: 66  RMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTA 125

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           +F   +  LC    +     +   M  +GF P+V  +  L+N  CK+G  + A + L  M
Sbjct: 126 TFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSM 185

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
                  +V  ++ +ID   + R+L  A  L+  M+  G SPN  TY+SLI G      +
Sbjct: 186 EQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHW 245

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
             A      +      PD +  N L+D L K G    A  V D +++  L PD  T+ SL
Sbjct: 246 KEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSL 305

Query: 367 LSTVCLSGR-------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
           +   CL          F  + +  C   V    + Y  L++ +CK    ++A+ L+  M 
Sbjct: 306 MDGHCLRSEMGKTVNVFDTMVRKGCVPSV----ISYTTLINGYCKIQIMDKAMGLFEEMS 361

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM------------------------ 455
            +G  PD  ++  L+ GLC   ++ +AI ++  +V+                        
Sbjct: 362 QQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLA 421

Query: 456 -----------NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
                       N   + H+++ ++D +  AG    A  LF +   +    DV +YT+ I
Sbjct: 422 EAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMI 481

Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
            GL + G   EA  L+ +M      PNA TY ++   F +        +L Q+++     
Sbjct: 482 NGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFS 541

Query: 565 LDYHTSIRLTKFI 577
           +D  T+  L + +
Sbjct: 542 IDVSTTTLLVEML 554



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/430 (24%), Positives = 198/430 (46%), Gaps = 3/430 (0%)

Query: 175 KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
           ++L+    P+ + F+  L ++ ++   S V  +   M   G   N     IL+N FC + 
Sbjct: 44  RMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLN 103

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
           R+  A+ +LG ++ LG   S   +T LI G     ++  A  L++KM   G  P+V+TY 
Sbjct: 104 RLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYG 163

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
           +LI G  +    S A  FL  +E     P +V ++ +ID L K     +AL ++  +L  
Sbjct: 164 TLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAK 223

Query: 355 KLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQA 411
            + P+++T+ SL+  +C+ G +    +L   +   ++  D + +N L+   CK G   +A
Sbjct: 224 GISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKA 283

Query: 412 VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
             + + M+     PD  ++  L+ G C   ++ + +NV+  +V      +   +T +++ 
Sbjct: 284 HYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLING 343

Query: 472 LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
             +     KA+ LF     +    D V+Y   I GL   GR  +A  L+ +M      P+
Sbjct: 344 YCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPD 403

Query: 532 AYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLV 591
             TYR++    CK   +     LL+ +    ++ D H    +   + +     +A +   
Sbjct: 404 LVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFS 463

Query: 592 EMCNLGLIPD 601
           ++ + GL PD
Sbjct: 464 KLSSKGLHPD 473



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 117/508 (23%), Positives = 225/508 (44%), Gaps = 47/508 (9%)

Query: 50  PHIVH-STLLNCPSDLIALSFFIWCAKQRDYF---HDVQSFDHMISVVTRLTGRFETVRG 105
           P IV  S LL   + +   S  +   KQ D F   H+  + + +I+    L  R      
Sbjct: 52  PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLN-RLGFAFS 110

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           ++G++ ++G      TF   +R        G  L+ FD+M   GF P+      +++ L 
Sbjct: 111 VLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLC 170

Query: 166 KIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN-- 219
           K+G     I+ L+  +     P  + ++  + +LCK   ++    +   M+ KG  PN  
Sbjct: 171 KVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNF 230

Query: 220 ------------------VRMF---------------EILLNCFCKMGRIAEAYQLLGLM 246
                             +R+F                 L++  CK G + +A+ ++ +M
Sbjct: 231 TYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVM 290

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
           I       V  +  L+DG      +     +++ MV+ GC P+V++YT+LI G+ + ++ 
Sbjct: 291 IQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIM 350

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
             A    + +  +G  PD V +N LI  L  +G   DA+ ++  ++    +PD  T+  L
Sbjct: 351 DKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRIL 410

Query: 367 LSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
              +C + R +   +L K++ G  ++ D+ +Y+ ++   C+AG    A  L++ +  KG 
Sbjct: 411 FDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGL 470

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
            PD  ++  ++ GLC    + EA  ++  +  N  + NA  +  I    +      +AIQ
Sbjct: 471 HPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQ 530

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
           LF+  +   + +DV + T+ +  L + G
Sbjct: 531 LFQEMLSRGFSIDVSTTTLLVEMLSDDG 558



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 129/275 (46%), Gaps = 10/275 (3%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
           Q D   DV +++ ++      +   +TV  +   + R GCV    ++   +  Y + ++ 
Sbjct: 292 QSDLKPDVVTYNSLMDGHCLRSEMGKTVN-VFDTMVRKGCVPSVISYTTLINGYCKIQIM 350

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET----QLPNFLSFNIA 191
              +  F+EM + G  P+T   N ++  L  +GR+   I +  E     Q+P+ +++ I 
Sbjct: 351 DKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRIL 410

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
              LCK + ++    ++ ++      P++ ++ I+++  C+ G +  A  L   + + G 
Sbjct: 411 FDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGL 470

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
              V  +T++I+G  +   L  A  L+ +M +NGCSPN  TY  + +GF+       A  
Sbjct: 471 HPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQ 530

Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALD 346
               + S G + D+    +L++ LS     DD LD
Sbjct: 531 LFQEMLSRGFSIDVSTTTLLVEMLS-----DDGLD 560


>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
 gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
          Length = 653

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 120/515 (23%), Positives = 230/515 (44%), Gaps = 43/515 (8%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWR---GEMYGMVLEAFDEMGRFGFTPNT 154
           GR      ++ E+ R GC      + + L        G  +   +    ++   G   + 
Sbjct: 129 GRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDV 188

Query: 155 FARNIVMD-VLFKIGRVDLGIKVLKETQL-----PNFLSFNIALCNLCKLNDVSNVKDVI 208
              N+V++ V  + G VD  +++L++        P+ +S+N  L  LC       V+D++
Sbjct: 189 GNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLM 248

Query: 209 GMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRL 268
             MVR G  PNV  F  L+   C+ G     +Q+L  M+  G +  +  +  ++DG  + 
Sbjct: 249 EEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKE 308

Query: 269 RRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL-DMLESEGHAPDLVF 327
             L++A  + ++M   G  PNVV Y +++KG   A+ +  A   L +M +++    D+ F
Sbjct: 309 GHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTF 368

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE 387
            N+L+D   + G     +++ + +LE   VPD                            
Sbjct: 369 -NILVDFFCQNGLVYRVIELLEQMLEHGCVPD---------------------------- 399

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
               ++ Y  +++ FCK G  ++AV L  +M   G  P+  S+  +L+GLC A +  +A 
Sbjct: 400 ----VITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAE 455

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
           ++   ++    + N      +++ L + G   +AI+L ++ ++     D++SY+  I GL
Sbjct: 456 DLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGL 515

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
            + G+T+EA  L + M +  + PN   Y  +  +  KE  I  V ++  ++ D  I  D 
Sbjct: 516 GKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDA 575

Query: 568 HTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
                +   + K   +  A+  L  M + G +P+E
Sbjct: 576 VLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNE 610



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 98/372 (26%), Positives = 182/372 (48%), Gaps = 8/372 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           +V +F+ +I  + R  G FE V  ++ ++   GC    + +   L    +     +  E 
Sbjct: 259 NVVTFNTLIGYLCR-NGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEI 317

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE---TQLP-NFLSFNIALCNLCK 197
            D M  +G  PN    N V+  L    R +   ++L E      P + ++FNI +   C+
Sbjct: 318 LDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQ 377

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              V  V +++  M+  G  P+V  +  ++N FCK G I EA  LL  M   G   +  +
Sbjct: 378 NGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTIS 437

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T+++ G     R   A  L  +M++ GCSPN VT+ ++I    +  +   A   L  + 
Sbjct: 438 YTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQML 497

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G +PDL+ ++ +ID L K G  D+AL++ + ++   + P++  + S+ S +   GR +
Sbjct: 498 LNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRIN 557

Query: 378 LLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
            + ++   +  + + +D V+YNA++S  CK G  ++A++    M+  G  P+  ++  L+
Sbjct: 558 RVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILI 617

Query: 435 RGLCGARKIDEA 446
           RGL     + EA
Sbjct: 618 RGLASEGFVKEA 629



 Score = 46.2 bits (108), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 50/247 (20%), Positives = 94/247 (38%), Gaps = 43/247 (17%)

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           YNA++S +C+AG    A +L  ++      P+ Y++  ++R LC   +I +A++V   + 
Sbjct: 86  YNAMVSGYCRAGQLASARRLAASV---PVPPNAYTYFPVVRALCARGRIADALSVLDEMR 142

Query: 455 MNNPAVNAHVHTAIVDR-------------------------LIEAGRCH---------- 479
               A    ++  I++                           ++ G C+          
Sbjct: 143 RRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQG 202

Query: 480 ----KAIQLFRRAIVE-KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
               +A++L R          DVVSY   ++GL    R      L  +M  +  PPN  T
Sbjct: 203 GSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVT 262

Query: 535 YRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMC 594
           +  ++   C+    + V ++L  ++D     D      +   + K      A   L  M 
Sbjct: 263 FNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMP 322

Query: 595 NLGLIPD 601
           + GL P+
Sbjct: 323 SYGLKPN 329


>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 147/634 (23%), Positives = 257/634 (40%), Gaps = 93/634 (14%)

Query: 3   WRC-KRSLFYTAQRTQILKTIISFKSIHQISSPKVCATTHQDFPIILAPHIVHSTLLNCP 61
           +RC   +LF TAQ   I   +++   + +  +P   A   +     L+  IV+  +    
Sbjct: 21  FRCLHANLFTTAQGAAISNEVLT---VMETVNPMEDAL--EKLAPFLSSEIVNDVMREQR 75

Query: 62  SDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQT 121
              +   FFIW  ++R  F    + + +I ++ +  G F+T   I+ EL      I   T
Sbjct: 76  RPELGFRFFIWTTRRRS-FRSWVTHNLVIDMLAKDDG-FDTYWKILEELKNSNIQIPPPT 133

Query: 122 FLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN----------------------- 158
           F + +  Y +  M    +E+F +M  FG  P+ F  N                       
Sbjct: 134 FSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQML 193

Query: 159 ------------IVMDVLFKIGRVDLGIKVLKE-TQL---PNFLSFNIALCNLCKLNDVS 202
                       I+++ L K G+ D  +K+  E TQ    PN + + I L  LC+     
Sbjct: 194 KLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTD 253

Query: 203 NVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLI 262
           +V  ++  M   G  P+      LL+ FCK+G+I EA+ LL L    G  L +  ++ LI
Sbjct: 254 DVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLI 313

Query: 263 DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
           DG  R +R D       KM + G  P+VV YT LI+GF E  M   A + L+ +   G +
Sbjct: 314 DGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLS 373

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL 382
           PD   +N LI     +G  D A  +   + +    P S T+  L+  +C +G      ++
Sbjct: 374 PDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQI 433

Query: 383 VCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLY------------------------ 415
              +E       ++ +NAL+   CKAG   +A  L+                        
Sbjct: 434 FNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMD 493

Query: 416 ------------------NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
                             + M+  G TP +  +  L+   C   K+  A +++   + + 
Sbjct: 494 TANGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSL 553

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAY 517
           P+        + +   E G   KA++       +    ++  YT+ + GL +  R+EEA 
Sbjct: 554 PSQEDET-LKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEAL 612

Query: 518 ILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
            ++  +K   +  N  +  +++   CK+ N++M 
Sbjct: 613 KIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMA 646



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 119/289 (41%), Gaps = 23/289 (7%)

Query: 326 VFHNVLIDCLSKMGSYDDALDVYDGLLE------LKLVPDSYTFCSLLSTVCLSG----- 374
           V HN++ID L+K    DD  D Y  +LE      +++ P   TF  L++    SG     
Sbjct: 97  VTHNLVIDMLAK----DDGFDTYWKILEELKNSNIQIPPP--TFSVLIAAYAKSGMAEKA 150

Query: 375 --RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
              F  +    C    + D+  YN++L    +      A+ +YN ML   + P+  +FV 
Sbjct: 151 VESFGKMKDFGC----KPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVI 206

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           LL GLC   K D+A+ ++  +       N  ++T I+  L +A R     +L     V  
Sbjct: 207 LLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSG 266

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVK 552
              D ++    + G  + G+ +EA+ L    +          Y  ++    + +    V+
Sbjct: 267 CCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQ 326

Query: 553 RLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
              + +  A IE D      L +   +      A+N L +M   GL PD
Sbjct: 327 EWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPD 375


>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
          Length = 800

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 119/465 (25%), Positives = 213/465 (45%), Gaps = 8/465 (1%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLN 199
           EM   G   + +  ++VM   FK G  D  +++  E       P+    ++A+ +LCKL 
Sbjct: 167 EMRGKGHPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
           D +    V+  M   GF P    F  +++   K GR+ EA  +   ++  G  +SV   T
Sbjct: 227 DANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLAT 286

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
            L+ G+   R +  A  ++E+ +++G  P  VTYT LI+G  E  M   A+     +   
Sbjct: 287 TLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDH 346

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
           G  P     N++I  L     + DA+ ++  + +   +PD++T+  L+  +C   +    
Sbjct: 347 GLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMAD-SGIPDAFTYNILIHWLCQRRKIREA 405

Query: 380 PKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
             L   +    V+  +V Y++LL  +C  G  ++AVKLY  M  KGFTP+  ++  L++G
Sbjct: 406 LNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKG 465

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
                  D+A  +   +  N  + N + +  +++ L   GR  +  ++ +R   E +   
Sbjct: 466 HINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPT 525

Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
            ++Y   I G ++ G    A+ +Y QM    +PPN  TY   +  +CK     +  ++L 
Sbjct: 526 AMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLN 585

Query: 557 DVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           DV    +  D      L     +  + S A+  LV M   GL+P+
Sbjct: 586 DVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPN 630



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 109/470 (23%), Positives = 203/470 (43%), Gaps = 6/470 (1%)

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           I  E  R G V    T+ + +R      M     E   +M   G  P+T   N+V+  L 
Sbjct: 304 IFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLL 363

Query: 166 KIGRVDLGIKVLKE---TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
                   + + KE   + +P+  ++NI +  LC+   +    ++   M   G  P +  
Sbjct: 364 NDKLWKDAVSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVT 423

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           +  LL C+C  G + EA +L   M   G + +V  +T L+ G       D A  L  +M 
Sbjct: 424 YHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMK 483

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
           QNG S N  TY +LI G             L   E+EG  P  + +N +I+   K G   
Sbjct: 484 QNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMG 543

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALL 399
            A  VY  +    + P+  T+ S +   C +    L  K++  +  +    D+  YN+L+
Sbjct: 544 SAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLI 603

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
             FC+ G  + A+++   ML  G  P+   +   + G    + ++EA+  Y+ ++     
Sbjct: 604 YGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGID 663

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
           ++   +T ++D   + G    A++L+   + +    D +++T    GL   G  ++A  L
Sbjct: 664 LDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKL 723

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
             +M  + + PN   Y +++  + +   ++   RL  ++++ +I  D  T
Sbjct: 724 LDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTT 773



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 106/500 (21%), Positives = 199/500 (39%), Gaps = 43/500 (8%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNL-----CKL 198
           +M   GF P  F  N V+DVL K GR++  + + K+  L      ++ L        C  
Sbjct: 237 KMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHI-KDELLATGKKMSVVLATTLMHGYCLQ 295

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
            +V    D+    +R G  P    + +L+    + G   +AY+L   M   G   S N +
Sbjct: 296 REVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEF 355

Query: 259 TVLIDG-------------FRRL---------------------RRLDMAGYLWEKMVQN 284
            ++I G             F+ +                     R++  A  LWEKM + 
Sbjct: 356 NMVIKGLLNDKLWKDAVSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNET 415

Query: 285 GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
           G  P +VTY SL+  +        A      +  +G  P++V +  L+       ++D A
Sbjct: 416 GVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKA 475

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSY 401
             +   + +  +  + YT+ +L++ +C+ GR   + +++   E E      + YN++++ 
Sbjct: 476 YALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIING 535

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVN 461
           F KAG    A  +Y  M  KG  P+  ++   + G C     D A+ +   +       +
Sbjct: 536 FIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPD 595

Query: 462 AHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYS 521
              + +++    + G    A+Q+    + +    ++  Y   I G       EEA   Y 
Sbjct: 596 IAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYE 655

Query: 522 QMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFH 581
           +M    +  +  TY  ++  F K+ N+    +L  +++      D+ T   LT  + +  
Sbjct: 656 KMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNG 715

Query: 582 SSSSAVNQLVEMCNLGLIPD 601
               A   L EM  L + P+
Sbjct: 716 DIDDARKLLDEMNRLDIRPN 735



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 92/410 (22%), Positives = 169/410 (41%), Gaps = 44/410 (10%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALC 193
            L  +++M   G  P     + ++      G +D  +K+  E       PN +++   + 
Sbjct: 405 ALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMK 464

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
                        ++  M + G   N   +  L+N  C +GR+ E  ++L    T G   
Sbjct: 465 GHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVP 524

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
           +   +  +I+GF +   +  A  ++++M   G  PN+VTYTS I G+ +     +A   L
Sbjct: 525 TAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKML 584

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV--- 370
           + +  +G  PD+  +N LI    + G+   AL V   +L+  L+P+   + S ++     
Sbjct: 585 NDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNL 644

Query: 371 -CLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
             +        K++    ++ D   Y  L+  F K G    A+KLY+ M+ KG  PD+ +
Sbjct: 645 KMMEEALRFYEKMI-KEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHIT 703

Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
           F  L  GLC    ID+A                                 K +    R  
Sbjct: 704 FTALTHGLCRNGDIDDA--------------------------------RKLLDEMNRLD 731

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
           +     +V+ Y + I G L  G+ +EA+ L+ +M    + P+  TY +++
Sbjct: 732 IRP---NVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 124/272 (45%), Gaps = 4/272 (1%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           + GR   V  ++      G V  A T+   +  + +  M G     + +M   G  PN  
Sbjct: 503 VVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIV 562

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
                +D   K    DL +K+L + +     P+  ++N  +   C+  ++S+   V+ +M
Sbjct: 563 TYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLM 622

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
           ++ G  PN+ ++   +  +  +  + EA +    MI  G  L    +T LIDGF +   +
Sbjct: 623 LKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNV 682

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
             A  L+ +MV  G  P+ +T+T+L  G         A   LD +      P+++ +N+L
Sbjct: 683 TFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNML 742

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
           I+   + G   +A  ++D +LE K++PD  T+
Sbjct: 743 INGYLRNGKLQEAFRLHDEMLERKIMPDDTTY 774



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/320 (21%), Positives = 135/320 (42%), Gaps = 33/320 (10%)

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           M   G +P+  + T L+     +   + A + L  +  +GH  D    +V++    K G 
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEGM 192

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLS 400
           YDDA+ ++D +      P S                          E+E D  V +  ++
Sbjct: 193 YDDAVRLFDEM------PAS--------------------------EIEPDQRVCSVAIA 220

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
             CK    N+A+ +   M D GF P +++F  ++  L    +++EA+++   ++     +
Sbjct: 221 SLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKM 280

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
           +  + T ++          KA+ +F   + +      V+YTV IRG  E G  E+AY L 
Sbjct: 281 SVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELC 340

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKF 580
            QM+   + P+   + +++     ++  K    L +++ D+ I  D  T   L  ++ + 
Sbjct: 341 RQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGIP-DAFTYNILIHWLCQR 399

Query: 581 HSSSSAVNQLVEMCNLGLIP 600
                A+N   +M   G+ P
Sbjct: 400 RKIREALNLWEKMNETGVKP 419


>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g31840-like [Vitis vinifera]
          Length = 1131

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 145/586 (24%), Positives = 240/586 (40%), Gaps = 83/586 (14%)

Query: 66  ALSFFIWCAKQRDYFHDVQSF-------------DHMISVVTRLTGRFETVRGIVGELA- 111
           AL FF W        H VQSF             D    V  R+ G+F  +  ++GE   
Sbjct: 72  ALRFFEWAENFLGLCHPVQSFCGIAHVLLRHRMFDPATRVFDRMVGQFGNLE-VLGEFHG 130

Query: 112 --RVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
             R      +  +   L  Y R  M    ++ F  M + G + + +A + ++D+L    R
Sbjct: 131 SFRNYGSNPSTVYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDR 190

Query: 170 VD------------LGI------KVLKETQLPNFLSFNIAL-----------CN-----L 195
           +D            LG+        LK  ++   L+F+ AL           CN     L
Sbjct: 191 IDVILENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGL 250

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
           C  N +    D   MMVR G  PN+  F  L+N +CK  R+ EA+ L  LMI  G    +
Sbjct: 251 CMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDL 310

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
             +++LI+G  R  +L+    L+   +  G   +VV ++S++  ++       A      
Sbjct: 311 VIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTR 370

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
           +  EG +P++V +++LI+ L + G   +A  V+  +L+  L P   T             
Sbjct: 371 MLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLT------------- 417

Query: 376 FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
                              Y++L+  FCK+        LY  ML KG  PD      L+ 
Sbjct: 418 -------------------YSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLIN 458

Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
           GL     +DEA+  +   V     +N ++  A++D      R    ++++    + K   
Sbjct: 459 GLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIP 518

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
           DVV+YTV ++GL E GR +EA  L+ Q+      P+   Y  ++  FCK+R+     ++ 
Sbjct: 519 DVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIF 578

Query: 556 QDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           + +    I  D      L    F+     + +  L E+   GL PD
Sbjct: 579 KLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPD 624



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 108/454 (23%), Positives = 209/454 (46%), Gaps = 7/454 (1%)

Query: 160 VMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG 215
           +MD   ++G +   I+V    LKE   PN ++++I +  LC+   V     V G ++++G
Sbjct: 351 IMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQG 410

Query: 216 FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAG 275
             P+V  +  L++ FCK   + + + L G+M+  G    V   ++LI+G  R   +D A 
Sbjct: 411 LEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEAL 470

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
             + + V+ G + N   + +LI G    K          ++      PD+V + VL+  L
Sbjct: 471 RFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGL 530

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL---LPKLVCGLEVEADL 392
           ++ G  D+AL ++  LL+    PD   +C+L+   C     +    + KL+    +  D+
Sbjct: 531 AEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDI 590

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
            +YN L++ F + G     ++L   ++  G  PD  ++  ++ G C  +   +AI +++ 
Sbjct: 591 CIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEV 650

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           +       NA   T ++D   + GR   A+ +F   +      ++++Y+  I G  +   
Sbjct: 651 LKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTEN 710

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
           TE A+ LY +M    V PN  +Y +++   CK+  ++      Q  I   +  D      
Sbjct: 711 TESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGI 770

Query: 573 LTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRK 606
           L +   K    + A+     M   G++PD++ +K
Sbjct: 771 LIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQK 804



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 88/360 (24%), Positives = 169/360 (46%), Gaps = 9/360 (2%)

Query: 105 GIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVL 164
           G+ G + R G V       + +    R  M    L  F +  + G T N +  N ++D  
Sbjct: 436 GLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGC 495

Query: 165 FKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV 220
           F++ R   G+K+         +P+ +++ + +  L +   +     +   +++KGF P+ 
Sbjct: 496 FRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDH 555

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
            ++  L++ FCK    A   Q+  LM + G    +  + VLI+ F R   ++    L  +
Sbjct: 556 IIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLRE 615

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           +++ G  P++VTY ++I G+   K+FS A    ++L+     P+ +   +LID   K G 
Sbjct: 616 IIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGR 675

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLS----TVCLSGRFSLLPKLVCGLEVEADLVVYN 396
            DDA+ ++  +LE    P+  T+  L+     T      F L  K++ G  V  ++V Y+
Sbjct: 676 MDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKML-GDRVSPNIVSYS 734

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            L+   CK G   +A   +   + +   PD  ++  L+RG C   ++ EA+ +Y  +++N
Sbjct: 735 ILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVN 794



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 69/294 (23%), Positives = 138/294 (46%), Gaps = 36/294 (12%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALC 193
            L  F ++ + GF+P+      ++D   K      G+++ K  Q     P+   +N+ + 
Sbjct: 539 ALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLIN 598

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
              +   V NV +++  +++ G  P++  +  ++  +C +   ++A +L  ++    T  
Sbjct: 599 MFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQP 658

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
           +   +T+LID + +  R+D A  ++  M++ G  PN++TY+ LI G+ + +    AF   
Sbjct: 659 NAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELY 718

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           + +  +  +P++V +++LID L K G  ++A                      L+  C  
Sbjct: 719 EKMLGDRVSPNIVSYSILIDGLCKKGLMEEA---------------------SLAFQCAI 757

Query: 374 GRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           GR  LLP          D++ Y  L+  +CK G   +A+ LY+ ML  G  PD+
Sbjct: 758 GR-HLLP----------DVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDD 800



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 72/307 (23%), Positives = 139/307 (45%), Gaps = 28/307 (9%)

Query: 51  HIVHSTLLN--CPSDLIALSFFIWCAKQRD-YFHDVQSFDHMISVVTRLTGRFETVRGIV 107
           HI++ TL++  C     A    I+   Q +  F D+  ++ +I++  R  G  E V  ++
Sbjct: 555 HIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFR-EGCVENVLELL 613

Query: 108 GELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKI 167
            E+ + G      T+   +  Y   +++   ++ F+ +      PN     I++D   K 
Sbjct: 614 REIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKD 673

Query: 168 GRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMF 223
           GR+D  +     +L+    PN L+++  +    K  +  +  ++   M+     PN+  +
Sbjct: 674 GRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSY 733

Query: 224 EILLNCFCKMGRIAEAYQLLGLMITLGTSL--SVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            IL++  CK G + EA   L     +G  L   V A+ +LI G+ ++ RL  A  L++ M
Sbjct: 734 SILIDGLCKKGLMEEAS--LAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHM 791

Query: 282 VQNGCSPNVVTYTSLIK-GFM--EAKMFSIAF-------------SFLDMLESEGHAPDL 325
           + NG  P+ +   +L + GF   +A ++S  F             S  D+L+++    DL
Sbjct: 792 LVNGIMPDDLLQKALAEYGFQDSQASIYSTVFPESPLNLLVCPVSSMGDILQNKRSNDDL 851

Query: 326 VFHNVLI 332
              N+L+
Sbjct: 852 FPPNILV 858


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/437 (24%), Positives = 203/437 (46%), Gaps = 3/437 (0%)

Query: 170 VDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
           V L  +++    LP+ + FN+ L ++ K+        +   M  +G  P++    IL+NC
Sbjct: 63  VALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINC 122

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
           +C +G +  A+ +LG+++  G  L+    T ++ G      +  A    + +V  G   +
Sbjct: 123 YCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLD 182

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
            VTY +LI G  +  +   AF  L  +E +   P++V +N+++D L K G   +A D+Y 
Sbjct: 183 EVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYS 242

Query: 350 GLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAG 406
            ++   + PD +T+  L+   C  G++  + +L+C +    V  ++  YN L+   CK G
Sbjct: 243 DVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKG 302

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
              +A  + N M+++G  PD  +F  L+ G C    + EA  ++          +   + 
Sbjct: 303 MLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYN 362

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
            ++    +  R  +A+ LF +   +K   ++V+Y+  I GL + GR   A+ L+S +   
Sbjct: 363 ILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDG 422

Query: 527 AVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSA 586
              PN  TY +ML + CK + +     L   + +  +  +  +   L     K      A
Sbjct: 423 GPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEA 482

Query: 587 VNQLVEMCNLGLIPDEM 603
           +N   EM    L+PD +
Sbjct: 483 MNLFEEMHRRNLVPDSV 499



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 116/442 (26%), Positives = 197/442 (44%), Gaps = 13/442 (2%)

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNI 190
           Y   +    +MG  G TP+    +I+++    +G +     VL    K     N ++   
Sbjct: 94  YPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTT 153

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +  LC   +V    +    +V +GF  +   +  L+N  CK+G   EA++LL  M    
Sbjct: 154 IMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQV 213

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
              +V  + +++DG  +   +  A  L+  +V  G  P+V TYT LI GF     +    
Sbjct: 214 VRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVT 273

Query: 311 SFL-DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
             L DM++   +  ++  +N+LID L K G    A D+ + ++E    PD  TF +L+S 
Sbjct: 274 RLLCDMVDRNVNL-NVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSG 332

Query: 370 VCLSGRFSLLPKLV-----CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
            CL        KL      CG  +  D+  YN L+  +CK    ++A+ L+N M  K   
Sbjct: 333 YCLYNDVVEARKLFDTFAECG--ITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLA 390

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           P+  ++  L+ GLC + +I  A  ++  I    P+ N   +  ++D L +     KAI+L
Sbjct: 391 PNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIEL 450

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
           F          +V SY + I G  +  R +EA  L+ +M    + P++ TY  ++   CK
Sbjct: 451 FNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCK 510

Query: 545 ERNIKMVKRLLQDVIDARIELD 566
              I     L   + D    +D
Sbjct: 511 SGRISHAWELFNVMHDGGPPVD 532



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/414 (23%), Positives = 187/414 (45%), Gaps = 36/414 (8%)

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCN 194
           LE  D +   GF  +      +++ L KIG      ++L + +     PN + +N+ +  
Sbjct: 168 LEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDG 227

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           LCK   V+  +D+   +V +G  P+V  +  L++ FC +G+  E  +LL  M+    +L+
Sbjct: 228 LCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLN 287

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           V  + +LID   +   L  A  +   M++ G  P++VT+ +L+ G+        A    D
Sbjct: 288 VYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFD 347

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
                G  PD+  +N+LI    K    D+AL +++ +   KL P+               
Sbjct: 348 TFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPN--------------- 392

Query: 375 RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
                            +V Y++L+   CK+G  + A +L++ + D G +P+  ++  +L
Sbjct: 393 -----------------IVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIML 435

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
             LC  + +D+AI ++  +       N   +  +++   ++ R  +A+ LF         
Sbjct: 436 DALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLV 495

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
            D V+Y   I GL + GR   A+ L++ M     P +  TY ++  +F K +++
Sbjct: 496 PDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAFSKIQHV 549



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/317 (23%), Positives = 147/317 (46%), Gaps = 5/317 (1%)

Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
           I +A  L   +IT+    SV  + +++    +++    A  L ++M   G +P++VT + 
Sbjct: 59  IDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSI 118

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           LI  +        AFS L M+   G+  + +    ++  L   G    AL+ +D ++   
Sbjct: 119 LINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQG 178

Query: 356 LVPDSYTFCSLLSTVCLSG----RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQA 411
            + D  T+ +L++ +C  G     F LL K+  G  V  ++V+YN ++   CK G   +A
Sbjct: 179 FLLDEVTYGTLINGLCKIGLTREAFELLHKME-GQVVRPNVVIYNMIVDGLCKDGLVTEA 237

Query: 412 VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
             LY+ ++ +G  PD +++  L+ G CG  +  E   +   +V  N  +N + +  ++D 
Sbjct: 238 RDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDA 297

Query: 472 LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
           L + G   KA  +    I      D+V++   + G        EA  L+       + P+
Sbjct: 298 LCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPD 357

Query: 532 AYTYRVMLLSFCKERNI 548
            ++Y ++++ +CK   I
Sbjct: 358 VWSYNILIIGYCKNNRI 374



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 112/212 (52%), Gaps = 7/212 (3%)

Query: 134 MYGMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFL 186
           +Y  V+EA   FD     G TP+ ++ NI++    K  R+D  + +  +       PN +
Sbjct: 335 LYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIV 394

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           +++  +  LCK   +S   ++   +   G  PNV  + I+L+  CK+  + +A +L  LM
Sbjct: 395 TYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLM 454

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
              G + +V+++ +LI+G+ + +R+D A  L+E+M +    P+ VTY  LI G  ++   
Sbjct: 455 FERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRI 514

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
           S A+   +++   G   D++ +N+L D  SK+
Sbjct: 515 SHAWELFNVMHDGGPPVDVITYNILFDAFSKI 546


>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
          Length = 812

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/460 (24%), Positives = 208/460 (45%), Gaps = 30/460 (6%)

Query: 137 MVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIAL 192
           + L  ++ M   G  PN    N++MD L K G     +K+  E      +PN   + + L
Sbjct: 190 LALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLL 249

Query: 193 CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
            +LC    +     ++G M  KG  P+   +   L+  CK+GR+ EA+Q L ++   G +
Sbjct: 250 SSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFA 309

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
           L +  ++ LIDG  + RR D     ++ M++   SP+VV YT +I+G  EA     A SF
Sbjct: 310 LGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSF 369

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
           LD+++ +G  PD   +N ++  L   G  + A  +   +L+  LV DS T   ++  +C 
Sbjct: 370 LDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCK 429

Query: 373 SGR-------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
            G        F  + +  C    +  ++ YNAL+  F + G   +A  L++ M + G  P
Sbjct: 430 RGLVDEAMQIFDEMGEHGC----DPTVMTYNALIDGFYREGRLEEARMLFHKM-EMGNNP 484

Query: 426 --------------DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
                         D+ S   L+  +C + ++ +A  + + I+ +    +   +  +++ 
Sbjct: 485 SLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLING 544

Query: 472 LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
           L +A     A++LF+   ++    D ++Y   I GLL   R  +A +L+  +      P+
Sbjct: 545 LCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPS 604

Query: 532 AYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSI 571
              Y  M+ S C+ + +     L  D +  +      + +
Sbjct: 605 LSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEV 644



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 113/518 (21%), Positives = 206/518 (39%), Gaps = 50/518 (9%)

Query: 88  HMISVVTRLTGRF-ETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMG 146
           H +S++ RL+    E +   + +    G    +  F   +  +         ++AF  M 
Sbjct: 105 HAVSLLLRLSSHADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRNADAVQAFSRMD 164

Query: 147 RFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVS 202
            F   P  F  N ++  L   G + L +    +++     PN  ++N+ +  LCK     
Sbjct: 165 EFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAG 224

Query: 203 NVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLI 262
           +   +   M+ +G  PNV+++ +LL+  C  G+I EA QLLG M   G       +   +
Sbjct: 225 DALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFL 284

Query: 263 DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
            G  ++ R++ A      +   G +  +  Y+ LI G  +A+ F   F +   +     +
Sbjct: 285 SGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNIS 344

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL 382
           PD+V + ++I   ++ G  +DAL   D + +   VPD  TFC                  
Sbjct: 345 PDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPD--TFC------------------ 384

Query: 383 VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
                       YN +L   C  G   +A  L + ML      D+ +   ++ GLC    
Sbjct: 385 ------------YNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGL 432

Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP-------- 494
           +DEA+ ++  +  +        + A++D     GR  +A  LF +  +   P        
Sbjct: 433 VDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTL 492

Query: 495 -----LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
                 D  S    +  + + G+  +AY L   +    V P+  TY  ++   CK RN+ 
Sbjct: 493 GANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLD 552

Query: 550 MVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAV 587
              RL +++    I  D  T   L   + + H  + A+
Sbjct: 553 GAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAM 590



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/403 (23%), Positives = 168/403 (41%), Gaps = 18/403 (4%)

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
           P   ++  +L      G I  A  L   M+  G + +   + VL+DG  +      A  +
Sbjct: 170 PTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKM 229

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
           +++M+  G  PNV  YT L+     A     A   L  ++ +G  PD V +N  +  L K
Sbjct: 230 FDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCK 289

Query: 338 MGSYDDALD----VYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLV 393
           +G  ++A      + DG   L L   S     L         F    K +    +  D+V
Sbjct: 290 VGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYY-KTMLERNISPDVV 348

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
           +Y  ++    +AG    A+   + M  KGF PD + +  +L+ LC    ++ A  +   +
Sbjct: 349 LYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEM 408

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
           + NN  +++   T ++  L + G   +A+Q+F           V++Y   I G    GR 
Sbjct: 409 LQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRL 468

Query: 514 EEAYILYSQMKHIAVPP-------------NAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
           EEA +L+ +M+    P              ++ + R ++   C+   +    +LL+ +ID
Sbjct: 469 EEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIID 528

Query: 561 ARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           + +  D  T   L   + K  +   AV    E+   G+ PDE+
Sbjct: 529 SGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEI 571


>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
 gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
          Length = 794

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/460 (24%), Positives = 208/460 (45%), Gaps = 30/460 (6%)

Query: 137 MVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIAL 192
           + L  ++ M   G  PN    N++MD L K G     +K+  E      +PN   + + L
Sbjct: 190 LALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLL 249

Query: 193 CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
            +LC    +     ++G M  KG  P+   +   L+  CK+GR+ EA+Q L ++   G +
Sbjct: 250 SSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFA 309

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
           L +  ++ LIDG  + RR D     ++ M++   SP+VV YT +I+G  EA     A SF
Sbjct: 310 LGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSF 369

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
           LD+++ +G  PD   +N ++  L   G  + A  +   +L+  LV DS T   ++  +C 
Sbjct: 370 LDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCK 429

Query: 373 SGR-------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
            G        F  + +  C    +  ++ YNAL+  F + G   +A  L++ M + G  P
Sbjct: 430 RGLVDEAMQIFDEMGEHGC----DPTVMTYNALIDGFYREGRLEEARMLFHKM-EMGNNP 484

Query: 426 --------------DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
                         D+ S   L+  +C + ++ +A  + + I+ +    +   +  +++ 
Sbjct: 485 SLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLING 544

Query: 472 LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
           L +A     A++LF+   ++    D ++Y   I GLL   R  +A +L+  +      P+
Sbjct: 545 LCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPS 604

Query: 532 AYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSI 571
              Y  M+ S C+ + +     L  D +  +      + +
Sbjct: 605 LSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEV 644



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 113/518 (21%), Positives = 207/518 (39%), Gaps = 50/518 (9%)

Query: 88  HMISVVTRLTGRF-ETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMG 146
           H +S++ RL+    E +   + +    G    +  F   +  +     +   ++AF  M 
Sbjct: 105 HAVSLLLRLSSHADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMD 164

Query: 147 RFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVS 202
            F   P  F  N ++  L   G + L +    +++     PN  ++N+ +  LCK     
Sbjct: 165 EFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAG 224

Query: 203 NVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLI 262
           +   +   M+ +G  PNV+++ +LL+  C  G+I EA QLLG M   G       +   +
Sbjct: 225 DALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFL 284

Query: 263 DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
            G  ++ R++ A      +   G +  +  Y+ LI G  +A+ F   F +   +     +
Sbjct: 285 SGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNIS 344

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL 382
           PD+V + ++I   ++ G  +DAL   D + +   VPD  TFC                  
Sbjct: 345 PDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPD--TFC------------------ 384

Query: 383 VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
                       YN +L   C  G   +A  L + ML      D+ +   ++ GLC    
Sbjct: 385 ------------YNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGL 432

Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP-------- 494
           +DEA+ ++  +  +        + A++D     GR  +A  LF +  +   P        
Sbjct: 433 VDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTL 492

Query: 495 -----LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
                 D  S    +  + + G+  +AY L   +    V P+  TY  ++   CK RN+ 
Sbjct: 493 GANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLD 552

Query: 550 MVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAV 587
              RL +++    I  D  T   L   + + H  + A+
Sbjct: 553 GAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAM 590



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/403 (23%), Positives = 168/403 (41%), Gaps = 18/403 (4%)

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
           P   ++  +L      G I  A  L   M+  G + +   + VL+DG  +      A  +
Sbjct: 170 PTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKM 229

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
           +++M+  G  PNV  YT L+     A     A   L  ++ +G  PD V +N  +  L K
Sbjct: 230 FDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCK 289

Query: 338 MGSYDDALD----VYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLV 393
           +G  ++A      + DG   L L   S     L         F    K +    +  D+V
Sbjct: 290 VGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYY-KTMLERNISPDVV 348

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
           +Y  ++    +AG    A+   + M  KGF PD + +  +L+ LC    ++ A  +   +
Sbjct: 349 LYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEM 408

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
           + NN  +++   T ++  L + G   +A+Q+F           V++Y   I G    GR 
Sbjct: 409 LQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRL 468

Query: 514 EEAYILYSQMKHIAVPP-------------NAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
           EEA +L+ +M+    P              ++ + R ++   C+   +    +LL+ +ID
Sbjct: 469 EEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIID 528

Query: 561 ARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           + +  D  T   L   + K  +   AV    E+   G+ PDE+
Sbjct: 529 SGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEI 571


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 117/451 (25%), Positives = 209/451 (46%), Gaps = 45/451 (9%)

Query: 149 GFTPNTFARNIVM----DVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNV 204
           G+ P+  A N V+    D      R  L   +L++   PN  ++NI +  LC        
Sbjct: 115 GYAPSLLAYNAVLLALSDASLPSARRLLA-SMLRDGVAPNVYTYNILVRALCARGQREEA 173

Query: 205 KDVIGMMVR-KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLID 263
             V+G  +R  G  PNV  +  L+  FC+ G +  A +L+G+M   G   S+  +  +++
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233

Query: 264 GFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP 323
           G  +  R++ A  ++++M + G +P+ V+Y +L+ G+ +A     A +    +  +G  P
Sbjct: 234 GLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVP 293

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG--------- 374
           D+V    LI  + + G+ + A+ +   + E  L  + +TF +L+   C +G         
Sbjct: 294 DVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAM 353

Query: 375 ----RFSLLPKLVC------GL--------------EVEA-----DLVVYNALLSYFCKA 405
                  + P +VC      G               E+EA     D+V Y+ +LS +CK 
Sbjct: 354 KEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKI 413

Query: 406 GFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVH 465
           G  + A +L   ML KG  PD  ++  L+RGLC  R++ +A  +++ ++      +   +
Sbjct: 414 GDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTY 473

Query: 466 TAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKH 525
           T ++D   + G   KA+ L    I +    DVV+Y+V I GL +  RT+EA  L  ++ +
Sbjct: 474 TTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYY 533

Query: 526 IAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
               P+   Y   L+  C+    K V  LL+
Sbjct: 534 EDPVPDNIKYEA-LMHCCRTAEFKSVVALLK 563



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 125/500 (25%), Positives = 222/500 (44%), Gaps = 25/500 (5%)

Query: 98  GRFETVRGIVGELAR-VGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           G+ E   G+VG+  R  GC     T+   +  + R             M   G  P+   
Sbjct: 168 GQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVT 227

Query: 157 RNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N V++ L K GR++   K+     +E   P+ +S+N  +   CK   +     V   M 
Sbjct: 228 FNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMA 287

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
           +KG  P+V  F  L++  C+ G +  A  L+G M   G  ++   +T LIDGF R   LD
Sbjct: 288 QKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLD 347

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A    ++M +    P+VV Y  LI G+ +      A   +  +E++G  PD+V ++ ++
Sbjct: 348 DALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTIL 407

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF----SLLPKLVCGLEV 388
               K+G  D A ++   +L+  +VPD+ T+ SL+  +C   R      L  K++  L +
Sbjct: 408 SGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKML-QLGL 466

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
           + D   Y  L+   CK G   +A+ L++ M+ KG  PD  ++  L+ GL  + +  EA  
Sbjct: 467 QPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQR 526

Query: 449 V-----YQGIVMNNPAVNAHVH----------TAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           +     Y+  V +N    A +H           A++      G  ++A ++++  +   +
Sbjct: 527 LLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHW 586

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
            LD   Y+V I G   GG   +A   + Q+      PN+ +   ++    +E        
Sbjct: 587 KLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADN 646

Query: 554 LLQDVIDARIELDYHTSIRL 573
           ++Q++++     D  TS  L
Sbjct: 647 VIQELLNCCSLADAETSKAL 666



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 107/425 (25%), Positives = 193/425 (45%), Gaps = 5/425 (1%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+ L++N  L  L   + + + + ++  M+R G  PNV  + IL+   C  G+  EA  +
Sbjct: 118 PSLLAYNAVLLALSDAS-LPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGV 176

Query: 243 LGL-MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           +G  M   G + +V  +  L+  F R   +D A  L   M + G  P++VT+ +++ G  
Sbjct: 177 VGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLC 236

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           +A     A    D +  EG  PD V +N L+    K G   +AL V+  + +  +VPD  
Sbjct: 237 KAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVV 296

Query: 362 TFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           TF SL+  +C +G       LV  +    +  +   + AL+  FC+ GF + A+     M
Sbjct: 297 TFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEM 356

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
            +    P    +  L+ G C   ++DEA  +   +       +   ++ I+    + G  
Sbjct: 357 RECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDT 416

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
             A +L R+ + +    D ++Y+  IRGL E  R  +A  L+ +M  + + P+ +TY  +
Sbjct: 417 DSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTL 476

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGL 598
           +   CKE N++    L  ++I   +  D  T   L   + K   +  A   L ++     
Sbjct: 477 IDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDP 536

Query: 599 IPDEM 603
           +PD +
Sbjct: 537 VPDNI 541



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 188/412 (45%), Gaps = 25/412 (6%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D  S++ ++S   +  G       +  E+A+ G V    TF   +    R       +  
Sbjct: 259 DGVSYNTLVSGYCK-AGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVAL 317

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVD---LGIKVLKETQL-PNFLSFNIALCNLCK 197
             +M   G   N F    ++D   + G +D   L +K ++E ++ P+ + +N+ +   CK
Sbjct: 318 VGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCK 377

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
           L  +   +++I  M  KG  P+V  +  +L+ +CK+G    A++L   M+  G       
Sbjct: 378 LGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAIT 437

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           ++ LI G    RRL  A  L+EKM+Q G  P+  TYT+LI G  +      A S  D + 
Sbjct: 438 YSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMI 497

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
            +G  PD+V ++VLID LSK     +A  +   L     VPD+  + +L+   C +  F 
Sbjct: 498 KKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMH-CCRTAEFK 556

Query: 378 LLPKLVCGLEV-----EADLV--------------VYNALLSYFCKAGFPNQAVKLYNTM 418
            +  L+ G  +     +AD V              VY+ L+   C+ G   +A+  +  +
Sbjct: 557 SVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQL 616

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
           L  GF+P++ S + L+RGL       EA NV Q ++      +A    A++D
Sbjct: 617 LRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELLNCCSLADAETSKALID 668



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/357 (23%), Positives = 160/357 (44%), Gaps = 18/357 (5%)

Query: 285 GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
           G +P+++ Y +++    +A + S       ML  +G AP++  +N+L+  L   G  ++A
Sbjct: 115 GYAPSLLAYNAVLLALSDASLPSARRLLASMLR-DGVAPNVYTYNILVRALCARGQREEA 173

Query: 345 LDVY-DGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLS 400
           L V  D +      P+  T+ +L++  C +G      +LV  +    V   LV +N +++
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
             CKAG    A K+++ M  +G TPD  S+  L+ G C A  + EA+ V+  +       
Sbjct: 234 GLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVP 293

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
           +    T+++  +  AG   +A+ L  +       ++  ++T  I G    G  ++A +  
Sbjct: 294 DVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAM 353

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKF 580
            +M+   + P+   Y V++  +CK   +   + L+ ++    ++ D  T   +     K 
Sbjct: 354 KEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKI 413

Query: 581 HSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTPVSLFDGFVPCERRAGNANHL 637
             + SA     +M   G++PD             +T  SL  G    ERR G+A  L
Sbjct: 414 GDTDSAFELNRKMLKKGVVPD------------AITYSSLIRGLCE-ERRLGDACEL 457



 Score = 52.0 bits (123), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 60/292 (20%), Positives = 121/292 (41%), Gaps = 27/292 (9%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLT--------GRFETVRGIVGELARVGCVIKAQTFLLFL 126
           + R+  H++++      VVT  T        G  ++   +  ++ + G V  A T+   +
Sbjct: 383 EARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLI 442

Query: 127 RIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQL 182
           R        G   E F++M + G  P+ F    ++D   K G V   +    +++K+  L
Sbjct: 443 RGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVL 502

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC------------- 229
           P+ +++++ +  L K       + ++  +  +   P+   +E L++C             
Sbjct: 503 PDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALL 562

Query: 230 --FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCS 287
             F   G + +A ++   M+     L  + ++VLI G  R   +  A    +++++ G S
Sbjct: 563 KGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFS 622

Query: 288 PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
           PN  +  SL++G  E  M   A + +  L +     D      LID   K G
Sbjct: 623 PNSTSTISLVRGLFEEGMTVEADNVIQELLNCCSLADAETSKALIDLNRKEG 674


>gi|357121428|ref|XP_003562422.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Brachypodium distachyon]
          Length = 663

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 134/568 (23%), Positives = 237/568 (41%), Gaps = 53/568 (9%)

Query: 48  LAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIV 107
           L P +V+  +        A+ F+ W   +  + H   +  +++S++  + G F  +   +
Sbjct: 88  LDPIVVNLVVRGLSDSETAVRFYWWAESRPGFDHSQFAIAYLVSLLF-MDGNFALLSEFL 146

Query: 108 GELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEM-----GRFGFTPNTFARNIVMD 162
           G +   G  +    + + L  Y R   +  V+E FDEM       FG   N +   +V +
Sbjct: 147 GRVKSQGVALHRSLYRILLSGYVRAGKFDSVIETFDEMVMSGCREFGVDYNRYIGVLVKN 206

Query: 163 VLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
             F +      + + K   L  F +++  +  LC+ N +  V++++  M + G  P++  
Sbjct: 207 CCFDLVEKYYDMALAKGFCLTPF-TYSRWISALCQSNRIELVQELLVDMDKLGCSPDIWA 265

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
             I +   CK  R+ +A Q++                                   EKM 
Sbjct: 266 CNIYIYYLCKQNRLPDALQMV-----------------------------------EKMR 290

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
             G SP+VVTY +++ G  + K F+ A    + +      PD+     LI  L K    D
Sbjct: 291 TKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFGLCKNNKVD 350

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV---EADLVVYNALL 399
           +A ++   +L L +      + +L+S    +G      K++  +     E D+V YN LL
Sbjct: 351 EAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNILL 410

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
           +++C  G   +A KL   M   G  PD YS+  LL+GLC   ++D+A       V ++  
Sbjct: 411 NHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAF----AFVSDHME 466

Query: 460 VNAHVHTAIVDRLIEA----GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
           V     T   + LI+A     +   A++LF+    +    D V+Y   I GL   G    
Sbjct: 467 VGGFCDTVSCNILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLINGLFSVGYYNL 526

Query: 516 AYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTK 575
           A  L+ QM +  + PN   Y +ML   CK  + K  + +   +I   +  D  T   L  
Sbjct: 527 AEELFEQMLNAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIY 586

Query: 576 FIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           ++ K   +  A+N   +M   G+ PD +
Sbjct: 587 WLGKRSRAIEALNLFKDMRTRGVEPDTL 614



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/396 (23%), Positives = 180/396 (45%), Gaps = 50/396 (12%)

Query: 137 MVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIAL 192
           +V E   +M + G +P+ +A NI +  L K  R+   ++++++ +     P+ +++   +
Sbjct: 246 LVQELLVDMDKLGCSPDIWACNIYIYYLCKQNRLPDALQMVEKMRTKGTSPDVVTYQTVV 305

Query: 193 CNLCKLNDVSNVKDVIGM---MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
             LC   D     + IG+   MV++   P+V     L+   CK  ++ EA++L   M+TL
Sbjct: 306 SGLC---DNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFGLCKNNKVDEAFELASRMLTL 362

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT--------------- 294
              LSV  +  LI GF R   +D A  +   M  NGC P++VTY                
Sbjct: 363 DIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKA 422

Query: 295 --------------------SLIKGFMEAKMFSIAFSFL-DMLESEGHAPDLVFHNVLID 333
                                L+KG  +      AF+F+ D +E  G   D V  N+LID
Sbjct: 423 EKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFC-DTVSCNILID 481

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEA 390
              K      AL+++  +    +  D+ T+ +L++ +   G ++L  +L   +   +++ 
Sbjct: 482 AFCKTKKVKSALELFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQIDP 541

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           ++ +YN +L + CK G   +A  +++ M+ K  +PD  +F  L+  L    +  EA+N++
Sbjct: 542 NVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEALNLF 601

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
           + +       +      ++  L++ G+   A +++ 
Sbjct: 602 KDMRTRGVEPDTLTFKYLISGLLDEGKSTLAYEVWE 637



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/197 (22%), Positives = 83/197 (42%), Gaps = 5/197 (2%)

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET----QLPNFLSFNIALCNLCKL 198
           D M   GF  +T + NI++D   K  +V   +++ KE        + +++   +  L  +
Sbjct: 463 DHMEVGGFC-DTVSCNILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLINGLFSV 521

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
              +  +++   M+     PNV ++ I+L+  CK+G    A  +   MI    S     +
Sbjct: 522 GYYNLAEELFEQMLNAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTF 581

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
             LI    +  R   A  L++ M   G  P+ +T+  LI G ++    ++A+   + +  
Sbjct: 582 NTLIYWLGKRSRAIEALNLFKDMRTRGVEPDTLTFKYLISGLLDEGKSTLAYEVWEYMME 641

Query: 319 EGHAPDLVFHNVLIDCL 335
            G   D      LI  L
Sbjct: 642 NGIILDREVSERLISVL 658


>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Glycine max]
          Length = 642

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 110/464 (23%), Positives = 217/464 (46%), Gaps = 41/464 (8%)

Query: 115 CVIKAQTFLLFLRIYWRGEMYGMVLEAFDEM---GRFGFTPNTFARNIVMDVLFKIGRVD 171
           C    ++F   L +  +  ++   LE ++ +         PN    N+V+  + ++G VD
Sbjct: 128 CKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVD 187

Query: 172 LGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILL 227
             I+V +E  L    P+  +++  +  LCK   +     ++  M  +G +PN+  F +L+
Sbjct: 188 KAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLI 247

Query: 228 NCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCS 287
           +  CK G +  A +L+  M   G   +   +  L+ G     +L+ A  L  +MV N C 
Sbjct: 248 SALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCV 307

Query: 288 PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
           PN VT+ +LI GF+     S     L  LE+ GH  +   ++ LI  L K G ++ A+++
Sbjct: 308 PNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMEL 367

Query: 348 YDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGF 407
           +  ++     P++                                +VY+AL+   C+ G 
Sbjct: 368 WKEMVGKGCGPNT--------------------------------IVYSALIDGLCREGK 395

Query: 408 PNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTA 467
            ++A    + M +KG+ P+++++  L+RG   A    +AI V++ +  NN   N   ++ 
Sbjct: 396 LDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSI 455

Query: 468 IVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM--KH 525
           +++ L + G+  +A+ ++++ +     LDVV+Y+  I G       E+   L++QM  + 
Sbjct: 456 LINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQG 515

Query: 526 IAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
             V P+  TY ++L +FC +++I     +L  ++D   + D+ T
Sbjct: 516 PVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFIT 559



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 122/534 (22%), Positives = 230/534 (43%), Gaps = 36/534 (6%)

Query: 29  HQISSPKVCATTHQDFPIILAPHIVHSTLLNCPSDLIALSFF--IWCAKQRDYFHDVQSF 86
           H++     C  T + F  +L   IV   L N      AL F+  +  +K  +   +  +F
Sbjct: 120 HRMWGEFQCKQTVKSFNSVLNV-IVQEGLFN-----RALEFYNHVVASKSLNIHPNALTF 173

Query: 87  DHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMG 146
           + +I  + RL G  +    +  E+    C     T+   +    + E     +   DEM 
Sbjct: 174 NLVIKAMCRL-GLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQ 232

Query: 147 RFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVS 202
             G  PN  A N+++  L K G +    K++    L    PN +++N  +  LC    + 
Sbjct: 233 VEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLE 292

Query: 203 NVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLI 262
               ++  MV     PN   F  L+N F   GR ++  ++L  +   G   +   ++ LI
Sbjct: 293 KAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLI 352

Query: 263 DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
            G  +  + + A  LW++MV  GC PN + Y++LI G         A  FL  ++++G+ 
Sbjct: 353 SGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYL 412

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LL 379
           P+   ++ L+    + G    A+ V+  +     + +   +  L++ +C  G+F    ++
Sbjct: 413 PNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMV 472

Query: 380 PKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG--FTPDNYSFVGLLRGL 437
            K +    ++ D+V Y++++  FC A    Q +KL+N ML +G    PD  ++  LL   
Sbjct: 473 WKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAF 532

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
           C  + I  AI++    +M +   +    T           C   ++  R  +    P D 
Sbjct: 533 CIQKSIFRAIDILN--IMLDQGCDPDFIT-----------CDIFLKTLRENM--NPPQDG 577

Query: 498 VSY--TVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
             +   + +R L++  RT  A  +   M H  + P A T+ +++   CK +N++
Sbjct: 578 REFLDELVVR-LVKRQRTIGASKIIEVMMHKFLLPKASTWAMVVQQVCKPKNVR 630


>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 892

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 123/473 (26%), Positives = 215/473 (45%), Gaps = 28/473 (5%)

Query: 113 VGCVIKAQTFLLFL-RIYWRGEM-----YGMVLEAFDEMGRFGFT------------P-N 153
           VGC +  +     L +IY  GE      YG  ++   ++G FG              P N
Sbjct: 220 VGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLN 279

Query: 154 TFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIG 209
               N V+  L + G +D   +V KE +    LP+  S++I +   C+   V    +V  
Sbjct: 280 NHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFK 339

Query: 210 MMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLR 269
            M   G  PN+  + IL++ FCK GR+ +A ++   M   G    V ++++LIDGF R  
Sbjct: 340 EMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKG 399

Query: 270 RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHN 329
            +D A   WE+M  N  SP+   Y SLIKG+ ++K F+ A     +++  G  PD +  N
Sbjct: 400 DMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACN 459

Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG----RFSLLPKLVCG 385
            ++    +   ++ AL + +   E  +  + Y++   +  +C          LLP ++  
Sbjct: 460 HILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVML-K 518

Query: 386 LEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
             V  D+V Y+ L+S F K     +AV L+  M   G T +  ++  L+       K+D 
Sbjct: 519 RNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDV 578

Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
           A  +++G+  +    +   +T++V      G   +A  LF     E    +VV+YT  I 
Sbjct: 579 AYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFIN 638

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
             L+  +  +A+ LY +MK   V P+   Y +++ +FC    +   + L  ++
Sbjct: 639 EYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEM 691



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 103/473 (21%), Positives = 198/473 (41%), Gaps = 50/473 (10%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI--------KVLKETQLPNFLSFNIALC 193
           F+ + +FG  PN     I+M+   +     + I        K+    + PN +++   + 
Sbjct: 194 FEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIK 253

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
            LCK+        +I  + RK    N   F  ++   C+ G + EA ++   M   G   
Sbjct: 254 GLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILP 313

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
            V ++++LIDGF R  R+D A  ++++M  +G  PN+ +Y+ LI GF +      A    
Sbjct: 314 DVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVF 373

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           + +++ G  PD+  +++LID   + G  D A+  ++ +      P ++ +CSL+      
Sbjct: 374 EEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIK----- 428

Query: 374 GRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
                                      Y+    F N A+K +  M   G  PD  +   +
Sbjct: 429 --------------------------GYYKSKQFAN-ALKEFRIMQKLGMWPDTIACNHI 461

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           L   C     ++A+ + +    N    N + +   + R+       KA+QL    +    
Sbjct: 462 LSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNV 521

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
             DVV+Y+  I    +   +E+A +L+ +M  + +  N  TY +++  F  +  + +  R
Sbjct: 522 LPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYR 581

Query: 554 LLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRK 606
           L + + ++R+   Y   I  T  +  F ++        EM     + DEM R+
Sbjct: 582 LFKGMKESRV---YPDQIAYTSLVAGFCNTG-------EMTRARALFDEMSRE 624



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 79/351 (22%), Positives = 164/351 (46%), Gaps = 9/351 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV S+  +I    R  G  ++      E+        A  +   ++ Y++ + +   L+ 
Sbjct: 384 DVYSYSILIDGFCR-KGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKE 442

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP----NFLSFNIALCNLCK 197
           F  M + G  P+T A N ++ +  +    +  + + ++ Q      N  S+N  +  +C+
Sbjct: 443 FRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICR 502

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            +       ++ +M+++   P+V  +  L++CF K     +A  L   M  +G + +V  
Sbjct: 503 GSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKT 562

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T+LI+ F    ++D+A  L++ M ++   P+ + YTSL+ GF      + A +  D + 
Sbjct: 563 YTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMS 622

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
            EG +P++V +   I+   K+   + A  +Y+ + E  + PD   +  L++  C +G  +
Sbjct: 623 REGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMN 682

Query: 378 LLPKLVCGLEVEA----DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
               L   ++ E     ++V+Y  L++ + K    +QA KLY  M  KG +
Sbjct: 683 RAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGLS 733



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/435 (20%), Positives = 188/435 (43%), Gaps = 8/435 (1%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G  +    +  E+   G +    ++ + +  + R        E F EM   G  PN ++ 
Sbjct: 294 GILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSY 353

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           +I++D   K GRVD  ++V +E +    LP+  S++I +   C+  D+ +       M  
Sbjct: 354 SILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTS 413

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
             F P+   +  L+  + K  + A A +   +M  LG      A   ++  + R    + 
Sbjct: 414 NNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNK 473

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L EK  +NG   N  +Y   I       +   A   L ++      PD+V ++ LI 
Sbjct: 474 ALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLIS 533

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEA 390
           C +K  + + A+ ++  + ++ +  +  T+  L++      +  +  +L  G++   V  
Sbjct: 534 CFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYP 593

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           D + Y +L++ FC  G   +A  L++ M  +G +P+  ++   +       K ++A  +Y
Sbjct: 594 DQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLY 653

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE-KYPLDVVSYTVAIRGLLE 509
           + +       +  ++T ++      G  ++A  LF     E +   +VV YT  I   ++
Sbjct: 654 EKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIK 713

Query: 510 GGRTEEAYILYSQMK 524
             + ++A  LY +M+
Sbjct: 714 LNKRDQAEKLYEEMR 728



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/319 (20%), Positives = 142/319 (44%), Gaps = 9/319 (2%)

Query: 291 VTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDG 350
           V +  LIK F    M   A       + +G   +++  N L+ CL +    D    +++ 
Sbjct: 137 VVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEV 196

Query: 351 LLELKLVPDSYTFCSLLSTVC--------LSGRFSLLPKLVCGLEVEADLVVYNALLSYF 402
           L++    P+ +T+  +++  C        +     +L K+    E   ++V Y   +   
Sbjct: 197 LIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGET-PNVVTYGTYIKGL 255

Query: 403 CKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNA 462
           CK G    A +L   +  K    +N+ F  ++ GLC    +DEA  V++ +  +    + 
Sbjct: 256 CKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDV 315

Query: 463 HVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQ 522
           + ++ ++D     GR  +A ++F+         ++ SY++ I G  + GR ++A  ++ +
Sbjct: 316 YSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEE 375

Query: 523 MKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHS 582
           MK+  + P+ Y+Y +++  FC++ ++    +  +++              L K  +K   
Sbjct: 376 MKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQ 435

Query: 583 SSSAVNQLVEMCNLGLIPD 601
            ++A+ +   M  LG+ PD
Sbjct: 436 FANALKEFRIMQKLGMWPD 454



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 71/355 (20%), Positives = 155/355 (43%), Gaps = 23/355 (6%)

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA----------------W 258
           GF  ++  F I+++ +   G   E + L+  ++T     + +A                +
Sbjct: 80  GFENSINSFSIIIHTYALAGMSWEVFILIRDIVTFYKEENRDAGELVSLLLDVEKSNVVF 139

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
            +LI  F     L+ A Y++ +   +G   N+++   L+K  +E           ++L  
Sbjct: 140 DMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEVLIK 199

Query: 319 EGHAPDLVFHNVLID--CLSKMGSYD--DALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            G  P++  + ++++  C     S D   A ++   +      P+  T+ + +  +C  G
Sbjct: 200 FGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLCKVG 259

Query: 375 RFSLLPKLV---CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
            F +  +L+   C      +   +NA++   C+ G  ++A +++  M + G  PD YS+ 
Sbjct: 260 LFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYS 319

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            L+ G C   ++D+A  V++ +  +    N + ++ ++D   + GR  KA+++F      
Sbjct: 320 ILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNS 379

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
               DV SY++ I G    G  + A   + +M      P+A+ Y  ++  + K +
Sbjct: 380 GILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSK 434



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/255 (19%), Positives = 100/255 (39%), Gaps = 39/255 (15%)

Query: 386 LEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
           L+VE   VV++ L+  F        A  ++    D G   +  S   LL+ L    ++D 
Sbjct: 130 LDVEKSNVVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDG 189

Query: 446 AINVYQGIVMNNPAVNAHVHTAI------------------------------------- 468
              +++ ++   P  N H +T +                                     
Sbjct: 190 VRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYG 249

Query: 469 --VDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
             +  L + G    A +L +    +  PL+   +   I GL +GG  +EA  ++ +MK+ 
Sbjct: 250 TYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNS 309

Query: 527 AVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSA 586
            + P+ Y+Y +++  FC++  +     + +++ ++ I  + ++   L     K      A
Sbjct: 310 GILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKA 369

Query: 587 VNQLVEMCNLGLIPD 601
           +    EM N G++PD
Sbjct: 370 LEVFEEMKNSGILPD 384


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 110/468 (23%), Positives = 205/468 (43%), Gaps = 46/468 (9%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLR-IYWRGEMYG---MVLEAFDEMGRFGFT 151
           + GR       + ++ +    +   T+ L L+ + W  +        +E F EM   G  
Sbjct: 114 MAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVE 173

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKE-TQLPNFLSFNIALCNLCKLNDVSNVKDVIGM 210
           P+  + +I++  L   GR+     +    T  P+ +++N+ +   CK+      + ++  
Sbjct: 174 PDLESYHILLSALSDSGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKE 233

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           +++ G+ PNV  + I++NC+CK+ ++ EA                  W V +        
Sbjct: 234 ILKAGYEPNVFTYSIIINCYCKLDKVEEA------------------WEVFM-------- 267

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
                    KM+++ C PN VT+ +LI GF +A M   A      +E  G    +V +N 
Sbjct: 268 ---------KMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNT 318

Query: 331 LIDCL-SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE-- 387
           LID L  K G    A+D+++ L    L P   T+ SL+   C + R S   +    +E  
Sbjct: 319 LIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK 378

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
              +++ Y+ L+   CK     +A K    M   G+TP   ++ GL+ G C   ++  A+
Sbjct: 379 CAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSAL 438

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
             ++ + +   A N  +   ++D L +A R +  ++L      E    DV++Y   I GL
Sbjct: 439 LFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGL 498

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
               R E+A  L+  M   A  PN  T+  ++   C ++ ++  + +L
Sbjct: 499 CSANRVEDAQRLFDGM---ACAPNVTTFNFLIRGLCAQKKVEEARNIL 543



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 90/373 (24%), Positives = 161/373 (43%), Gaps = 42/373 (11%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D+ +++ ++    ++   +E  + ++ E+ + G      T+ + +  Y + +      E 
Sbjct: 207 DIMTYNVLMDGYCKIGQTYE-AQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEV 265

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLC- 196
           F +M      PN    N ++    K G ++  IK+  E +        +++N  + +LC 
Sbjct: 266 FMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCK 325

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
           K   V    D+   +   G  P +  +  L+  FC   R++EA Q    M     + +V 
Sbjct: 326 KRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM-EGKCAPNVI 384

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
            +++LIDG  ++RR+  A    E M  +G +P VVTY  LI GF +      A  F + +
Sbjct: 385 TYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKM 444

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
           +  G AP+ V  N LID L K    +D L +                C + +  C     
Sbjct: 445 KLAGCAPNTVIFNTLIDGLCKAERANDGLRL---------------LCHMHAEGC----- 484

Query: 377 SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
                       + D++ YN L+S  C A     A +L++ M      P+  +F  L+RG
Sbjct: 485 ------------KPDVITYNCLISGLCSANRVEDAQRLFDGM---ACAPNVTTFNFLIRG 529

Query: 437 LCGARKIDEAINV 449
           LC  +K++EA N+
Sbjct: 530 LCAQKKVEEARNI 542



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 96/416 (23%), Positives = 179/416 (43%), Gaps = 22/416 (5%)

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N ++  L    + D  +++ KE       PN  ++N+ +   CK   +     V   M  
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT---LGTSLSVNAWTVLIDGFRRLRR 270
            G  PN      LL   C++G+++ A +L   M     L TS S N   +L+ GF    R
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHN---ILLRGFFMAGR 117

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGF----MEAKMFSIAFSFLDMLESEGHAPDLV 326
           +  A    + M ++  S    TY  ++KG       A     A  F   +++ G  PDL 
Sbjct: 118 VRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLE 177

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR---FSLLPKLV 383
            +++L+  LS  G   +A  ++  +      PD  T+  L+   C  G+      L K +
Sbjct: 178 SYHILLSALSDSGRMAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEI 234

Query: 384 CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
                E ++  Y+ +++ +CK     +A +++  M++    P+  +F  L+ G C A  +
Sbjct: 235 LKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGML 294

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA-GRCHKAIQLFRRAIVEKYPLDVVSYTV 502
           ++AI ++  +           +  ++D L +  G  + A+ LF +         +V+Y  
Sbjct: 295 EDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNS 354

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
            I+G  +  R  EA   + +M+     PN  TY +++   CK R +K   + L+D+
Sbjct: 355 LIQGFCDARRLSEAMQYFDEMEG-KCAPNVITYSILIDGLCKVRRMKEAAKTLEDM 409



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/299 (22%), Positives = 126/299 (42%), Gaps = 18/299 (6%)

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV 388
           N L+  L     +D AL ++  +L     P+++T+  L+   C  G+      +   ++ 
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 389 EA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
                +    N LL   C+ G  + A+KL+  M    F P + S   LLRG   A ++ +
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120

Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLI----EAGRCHKAIQLFRRAIVEKYPLDVVSYT 501
           A+   Q +  ++ +V    +  ++  L      A R  +A++ F+         D+ SY 
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180

Query: 502 VAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
           + +  L + GR  EA+ L+S M      P+  TY V++  +CK       + L+++++ A
Sbjct: 181 ILLSALSDSGRMAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKA 237

Query: 562 RIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM--------WRKLGLLSD 612
             E +  T   +     K      A    ++M     +P+ +        + K G+L D
Sbjct: 238 GYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLED 296



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 61/275 (22%), Positives = 122/275 (44%), Gaps = 10/275 (3%)

Query: 294 TSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE 353
            +L+ G + A+    A      + +   AP+   +NVLI    K G    A+ V+  +  
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 354 LKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADL---VVYNALLSYFCKAGFPNQ 410
             L+P++ T  +LL  +C  G+ S   KL   ++    L     +N LL  F  AG    
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120

Query: 411 AVKLYNTMLDKGFTPDNYSFVGLLRGLC----GARKIDEAINVYQGIVMNNPAVNAHVHT 466
           A+     M     +    ++  +L+GLC     A ++++A+  ++ +  +    +   + 
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
            ++  L ++GR  +A  LF          D+++Y V + G  + G+T EA  L  ++   
Sbjct: 181 ILLSALSDSGRMAEAHALFSAMTCSP---DIMTYNVLMDGYCKIGQTYEAQSLMKEILKA 237

Query: 527 AVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
              PN +TY +++  +CK   ++    +   +I++
Sbjct: 238 GYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIES 272



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 99/236 (41%), Gaps = 8/236 (3%)

Query: 83  VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF 142
           + +++ +I  + +  G   T   +  +L   G      T+   ++ +         ++ F
Sbjct: 313 IVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYF 372

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKL 198
           DEM      PN    +I++D L K+ R+    K L++ +     P  +++   +   CK 
Sbjct: 373 DEM-EGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKC 431

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
            ++ +       M   G  PN  +F  L++  CK  R  +  +LL  M   G    V  +
Sbjct: 432 GELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITY 491

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
             LI G     R++ A  L++ M    C+PNV T+  LI+G    K    A + LD
Sbjct: 492 NCLISGLCSANRVEDAQRLFDGMA---CAPNVTTFNFLIRGLCAQKKVEEARNILD 544


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 142/610 (23%), Positives = 258/610 (42%), Gaps = 45/610 (7%)

Query: 45  PIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSF----------------DH 88
           P + A H+     ++  ++ + + FF W +K+  Y H++  F                DH
Sbjct: 113 PQLKAHHVAEIVAVHKDTESV-IQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADH 171

Query: 89  MISVVTRLTGRFETVRGI---VGELARVG---CVIKAQTFLLFLRIYWRGEMYGMVLEAF 142
           +  ++ +     E +R +   + E++ +G    +    T L+ L  +   EM       +
Sbjct: 172 IRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKF---EMVEGARNLY 228

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE----TQLPNFLSFNIALCNLCKL 198
            +M   G  P+    N ++++L K G+V     +L +       P+  ++   +   C+ 
Sbjct: 229 KQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRN 288

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
            ++     V   MV++G  PN   +  L+N  C  GR+ EA  +L  MI  G   +V  +
Sbjct: 289 RNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTY 348

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
           T+ I     +   + A  L  +M + GC PNV TYT+LI G        +A      +  
Sbjct: 349 TLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLK 408

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS- 377
           EG  P+ V +N LI+ L   G +  AL ++  +     + ++ T+  ++  +CL G    
Sbjct: 409 EGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEK 468

Query: 378 --LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
             +L + +  +     +V YN L++ +   G  N A +L + M + G  PD +++  L+ 
Sbjct: 469 AMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVS 528

Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
           G     K++ A   +Q +V      N   +T ++D   + G+   A+ L  R        
Sbjct: 529 GFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNP 588

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
           +V SY   I GL +  R  EA  +  +M    + PN  TY  ++   C+    +   ++ 
Sbjct: 589 NVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIF 648

Query: 556 QDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETM 615
            D+   +   + +T   L   + +   +  A   L EM   GL PDE            +
Sbjct: 649 HDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDE------------V 696

Query: 616 TPVSLFDGFV 625
           T  SL DGFV
Sbjct: 697 TFTSLIDGFV 706



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 116/484 (23%), Positives = 210/484 (43%), Gaps = 31/484 (6%)

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           +V  + + GC    QT+   +    R     + +  + +M + G  PNT   N +++ L 
Sbjct: 367 LVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELC 426

Query: 166 KIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
             GR    +K+         L N  ++N  +  LC   D+     +   M++ G  P V 
Sbjct: 427 VGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVV 486

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            +  L+N +   G +  A +LL LM   G       +  L+ GF +  +L+ A + +++M
Sbjct: 487 TYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEM 546

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
           V+ G +PN V+YT+LI G  +     IA S L+ +E  G  P++  +N +I+ LSK   +
Sbjct: 547 VECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRF 606

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE---ADLVVYNAL 398
            +A  + D + E  L+P+  T+ +L+  +C +GR     K+   +E      +L  Y++L
Sbjct: 607 SEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSL 666

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           +   C+ G  ++A  L   M  KG  PD  +F  L+ G     +ID A  + + +V    
Sbjct: 667 IYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGC 726

Query: 459 AVNAHVHTAIVDRL-IEAGRCHKAIQLFRRAIVEKYP------LDVVS------------ 499
             N   ++ ++  L  E     + + +   A+    P       ++VS            
Sbjct: 727 KPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCE 786

Query: 500 -----YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
                Y+  + GL   GR  EA  L   MK     P+   Y  +L++ CK   +    ++
Sbjct: 787 PTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKI 846

Query: 555 LQDV 558
              +
Sbjct: 847 FHSI 850



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 107/404 (26%), Positives = 187/404 (46%), Gaps = 18/404 (4%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
           F EM   G  PN  +   ++D   K G+VD+ + +L+  +     PN  S+N  +  L K
Sbjct: 543 FQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSK 602

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            N  S  + +   M  +G  PNV  +  L++  C+ GR   A+++   M       ++  
Sbjct: 603 ENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYT 662

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           ++ LI G  +  + D A  L ++M + G +P+ VT+TSLI GF+       AF  L  + 
Sbjct: 663 YSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMV 722

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS---YTFCSLLSTVCLSG 374
             G  P+   ++VL+  L K     + L     LLE K+       Y+F      V    
Sbjct: 723 DVGCKPNYRTYSVLLKGLQK-----ECL-----LLEEKVAVQHEAVYSFSPHEKDVNFEI 772

Query: 375 RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
             +LL ++   +  E  L  Y+ L+S  C+ G   +A +L   M ++GF PD   +  LL
Sbjct: 773 VSNLLARM-SEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLL 831

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
              C   ++D A+ ++  I      ++  ++ A++  L +AG+  +A  LF   + +++ 
Sbjct: 832 IAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWN 891

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            D + +TV + GLL+ G  +    L   M+     PN  TY ++
Sbjct: 892 ADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVIL 935



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/265 (18%), Positives = 117/265 (44%), Gaps = 14/265 (5%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR +    ++  +  VGC    +T+ + L+   +  +      A      + F+P+    
Sbjct: 709 GRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDV 768

Query: 158 N--IVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG 215
           N  IV ++L ++  +            P   +++  +  LC+       + ++  M  +G
Sbjct: 769 NFEIVSNLLARMSEIGCE---------PTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERG 819

Query: 216 FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAG 275
           F P+  ++  LL   CK   +  A ++   +   G  L ++ +  LI    +  +++ A 
Sbjct: 820 FCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQ 879

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
            L++ M++   + + + +T L+ G ++     +    L ++ES+   P++  + +L   L
Sbjct: 880 ALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGREL 939

Query: 336 SKMGSYDDALDVYDGLLELKLVPDS 360
           S++G   ++  + D   +LK++ DS
Sbjct: 940 SRIGKSIESEPLAD---KLKVLKDS 961


>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
          Length = 794

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 112/460 (24%), Positives = 208/460 (45%), Gaps = 30/460 (6%)

Query: 137 MVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIAL 192
           + L  ++ M   G  PN    N++MD L K G     +K+  E      +PN   + + L
Sbjct: 190 LALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLL 249

Query: 193 CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
            +LC    +     ++G M  KG  P+   +   L+  CK+GR+ EA+Q L ++   G +
Sbjct: 250 SSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFA 309

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
           L +  ++ LIDG  + RR D     ++ M++   SP+VV YT +I+G  EA     A SF
Sbjct: 310 LGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSF 369

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
           LD+++ +G  PD   +N ++  L   G  + A  +   +L+  LV DS T   ++  +C 
Sbjct: 370 LDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCK 429

Query: 373 SGR-------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
            G        F  + +  C    +  ++ YNAL+  F + G   +A  L++ M + G  P
Sbjct: 430 RGLVDEAMQIFDEMGEHGC----DPTVMTYNALIDGFYREGRLEEARMLFHKM-EMGNNP 484

Query: 426 --------------DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
                         D+ S   L+  +C + ++ +A  + + I+ +    +   +  +++ 
Sbjct: 485 SLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLING 544

Query: 472 LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
           L +A     A++LF+   ++    D ++Y   I GLL   R  +A +L+  +      P+
Sbjct: 545 LCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPS 604

Query: 532 AYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSI 571
              Y  M+ S C+ + +     L  D +  +      + +
Sbjct: 605 LSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEV 644



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 113/518 (21%), Positives = 207/518 (39%), Gaps = 50/518 (9%)

Query: 88  HMISVVTRLTGRF-ETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMG 146
           H +S++ RL+    E +   + +    G    +  F   +  +     +   ++AF  M 
Sbjct: 105 HAVSLLLRLSSHADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMD 164

Query: 147 RFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVS 202
            F   P  F  N ++  L   G + L +    +++     PN  ++N+ +  LCK     
Sbjct: 165 EFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAG 224

Query: 203 NVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLI 262
           +   +   M+ +G  PNV+++ +LL+  C  G+I EA QLLG M   G       +   +
Sbjct: 225 DALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFL 284

Query: 263 DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
            G  ++ R++ A      +   G +  +  Y+ LI G  +A+ F   F +   +     +
Sbjct: 285 SGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNIS 344

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL 382
           PD+V + ++I   ++ G  +DAL   D + +   VPD  TFC                  
Sbjct: 345 PDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPD--TFC------------------ 384

Query: 383 VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
                       YN +L   C  G   +A  L + ML      D+ +   ++ GLC    
Sbjct: 385 ------------YNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGL 432

Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP-------- 494
           +DEA+ ++  +  +        + A++D     GR  +A  LF +  +   P        
Sbjct: 433 VDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTL 492

Query: 495 -----LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
                 D  S    +  + + G+  +AY L   +    V P+  TY  ++   CK RN+ 
Sbjct: 493 GANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLD 552

Query: 550 MVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAV 587
              RL +++    I  D  T   L   + + H  + A+
Sbjct: 553 GAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAM 590



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 109/514 (21%), Positives = 210/514 (40%), Gaps = 45/514 (8%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRF---GFTPN 153
            G+ +    ++G +   GC+    T+  FL    +    G V EAF  +      GF   
Sbjct: 255 AGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCK---VGRVNEAFQRLVMLQDGGFALG 311

Query: 154 TFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIG 209
               + ++D LF+  R D G      +L+    P+ + + I +    +   + +    + 
Sbjct: 312 LKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLD 371

Query: 210 MMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLR 269
           +M +KGF P+   +  +L   C  G +  A+ L   M+     L     T++I G  +  
Sbjct: 372 VMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRG 431

Query: 270 RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH- 328
            +D A  ++++M ++GC P V+TY +LI GF        A      +E  G+ P L    
Sbjct: 432 LVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEM-GNNPSLFLRL 490

Query: 329 -------------NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC---- 371
                          L+  + + G    A  +   +++  +VPD  T+ +L++ +C    
Sbjct: 491 TLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARN 550

Query: 372 LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
           L G   L  +L     +  D + Y  L+    +A   N A+ L+  +L  G +P    + 
Sbjct: 551 LDGAVRLFKELQLK-GISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYN 609

Query: 432 GLLRGLCGARKIDEAINV--------YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
            ++R LC  +K+ +AIN+        Y   V +    NAH       + IE G     ++
Sbjct: 610 SMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAH-------KEIEDGSLDDGVR 662

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
              +   E   +    YT+ + GL +  RT++A  ++  ++   +        +++   C
Sbjct: 663 ELIKIDQEYGSISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLC 722

Query: 544 KERNIKMVKRLLQDVIDARIELDYHTSIRLTKFI 577
            +RN+     ++   +   I L      RL +++
Sbjct: 723 WDRNLNAAVDIMLYALSKSIILSQPVGNRLLRWL 756



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 94/403 (23%), Positives = 168/403 (41%), Gaps = 18/403 (4%)

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
           P   ++  +L      G I  A  L   M+  G + +   + VL+DG  +      A  +
Sbjct: 170 PTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKM 229

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
           +++M+  G  PNV  YT L+     A     A   L  ++ +G  PD V +N  +  L K
Sbjct: 230 FDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCK 289

Query: 338 MGSYDDALD----VYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLV 393
           +G  ++A      + DG   L L   S     L         F    K +    +  D+V
Sbjct: 290 VGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYY-KTMLERNISPDVV 348

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
           +Y  ++    +AG    A+   + M  KGF PD + +  +L+ LC    ++ A  +   +
Sbjct: 349 LYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEM 408

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
           + NN  +++   T ++  L + G   +A+Q+F           V++Y   I G    GR 
Sbjct: 409 LQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRL 468

Query: 514 EEAYILYSQMKHIAVPP-------------NAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
           EEA +L+ +M+    P              ++ + R ++   C+   +    +LL+ +ID
Sbjct: 469 EEARMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIID 528

Query: 561 ARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           + +  D  T   L   + K  +   AV    E+   G+ PDE+
Sbjct: 529 SGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEI 571


>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 136/600 (22%), Positives = 244/600 (40%), Gaps = 63/600 (10%)

Query: 64  LIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGR---FETVRGIVGELARVG------ 114
           ++AL F  W  KQ     +     H++ + T +  +   +   + I+  LA+        
Sbjct: 33  VLALKFLKWVIKQPGL--EPNHLTHILGITTHVLVKARLYGYAKSILKHLAQKNSGSNFL 90

Query: 115 ----------CVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVL 164
                     C      F L +R+Y R  M G  +  F  M   GF P+ +  N++M  +
Sbjct: 91  FGVLMDTYPLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASM 150

Query: 165 FKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV 220
            K  R  L     K+       PN  SFNI +  LC    +    +++ MM R G+ P +
Sbjct: 151 VKNCRAHLVWSFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTI 210

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
             +  LL+  CK GR   A  L+  M   G    V  + + ID   R  R      + +K
Sbjct: 211 VSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKK 270

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           M     +PN V+Y +LI GF++     +A    + +     +P+L+ +N+LI+     G+
Sbjct: 271 MRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGN 330

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV----------------- 383
           +++AL V D +    + P+  T  +LL+ +  S +F +   ++                 
Sbjct: 331 FEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTV 390

Query: 384 ---------------------CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
                                C   V  D++ ++ L++ FCK G  N+A ++ + +  +G
Sbjct: 391 MIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREG 450

Query: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI 482
           F P+N  F  L+   C    + EA+  Y  + +N    +     ++V  L E G+  +A 
Sbjct: 451 FVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAE 510

Query: 483 QLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
           +            + V++   I G    G    A+ ++ +M      P+ +TY  +L   
Sbjct: 511 EFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVL 570

Query: 543 CKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
           CK +N    ++LL+ +    + +D  +   L   I K  +   AV    EM    ++PD 
Sbjct: 571 CKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDS 630



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 125/556 (22%), Positives = 233/556 (41%), Gaps = 87/556 (15%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           ++  Y   + S++ ++S   +  GRF+    ++  +   G      T+ +F+    R   
Sbjct: 202 ERNGYVPTIVSYNTLLSWCCK-KGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSR 260

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE----TQLPNFLSFNI 190
                    +M     TPN  + N +++   K G++ +  +V  E       PN +++NI
Sbjct: 261 SAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNI 320

Query: 191 ALCNLC---------------KLNDVSNVKDVIGMMVRKGFYPNVRMFEIL--------- 226
            +   C               + NDV   +  IG ++  G Y + + F++          
Sbjct: 321 LINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLL-NGLYKSAK-FDVARNILERYCI 378

Query: 227 ----LNC---------FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
               LNC          C+ G + EA+QLL  M   G    +  ++VLI+GF ++  ++ 
Sbjct: 379 NRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINK 438

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLI------KGFMEAKMFSIAFS---------------- 311
           A  +  K+ + G  PN V +++LI          EA  F  A +                
Sbjct: 439 AKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVA 498

Query: 312 -------------FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP 358
                        FL  +   G  P+ V  + +I+  + +G    A  V+D ++     P
Sbjct: 499 SLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHP 558

Query: 359 DSYTFCSLLSTVCLSGRF----SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKL 414
             +T+ SLL  +C    F     LL KL C + +  D + YN L+    K+G   +AV+L
Sbjct: 559 SPFTYGSLLKVLCKGQNFWEARKLLKKLHC-IPLAVDTISYNTLIVEISKSGNLLEAVRL 617

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP--AVNAHVHTAIVDRL 472
           +  M+     PD+Y++  +L GL    ++  A  ++ G +M      +N+ V+T  +D L
Sbjct: 618 FEEMIQNNILPDSYTYTCILSGLIREGRLVCAF-IFLGRLMQKEILTLNSIVYTCFIDGL 676

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
            +AG+   A+ LF+    +   LD+++      G    G+   A  L S+ ++  V PN 
Sbjct: 677 FKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNL 736

Query: 533 YTYRVMLLSFCKERNI 548
            T+ ++L  + + ++I
Sbjct: 737 TTFNILLHGYSRGQDI 752



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 101/452 (22%), Positives = 184/452 (40%), Gaps = 82/452 (18%)

Query: 153 NTFARNIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVI 208
           N  +  +++D L + G +D    L I++ K+   P+ ++F++ +   CK+ +++  K+V+
Sbjct: 384 NCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVM 443

Query: 209 GMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRL 268
             + R+GF PN  +F  L+   CK+G + EA +    M   G +        L+      
Sbjct: 444 SKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCEN 503

Query: 269 RRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP----- 323
            +L  A      + + G  PN VT+  +I G+      S AFS  D + S GH P     
Sbjct: 504 GKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTY 563

Query: 324 ------------------------------DLVFHNVLIDCLSKMGSYDDALDVYDGLLE 353
                                         D + +N LI  +SK G+  +A+ +++ +++
Sbjct: 564 GSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQ 623

Query: 354 LKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPN 409
             ++PDSYT+  +LS +   GR    F  L +L+    +  + +VY   +    KAG   
Sbjct: 624 NNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSK 683

Query: 410 QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
            A+ L+  M +KG + D                          I +N          +I 
Sbjct: 684 AALYLFKEMEEKGLSLD-------------------------LIALN----------SIT 708

Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
           D     G+   A  L  +   +    ++ ++ + + G   G      + LY+ M+     
Sbjct: 709 DGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFF 768

Query: 530 PNAYTYRVMLLSFCK----ERNIKMVKRLLQD 557
           PN  TY  ++L  C     E  IKM+K  + +
Sbjct: 769 PNRLTYHSLILGLCNHGMLELGIKMLKMFIAE 800



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 122/599 (20%), Positives = 225/599 (37%), Gaps = 88/599 (14%)

Query: 52  IVHSTLLN--CPSDLIALSFFIWCAKQRDYFH-DVQSFDHMISVVTRLTGRFETVRGIVG 108
           I H+ +++  C + L+  +F +     +D  H D+ +F  +I+   ++ G     + ++ 
Sbjct: 386 ISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKV-GNINKAKEVMS 444

Query: 109 ELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA---FDEMGRFGFTPNTFARNIVMDVLF 165
           ++ R G V      ++F  + +     G V EA   +  M   G   + F  N ++  L 
Sbjct: 445 KIYREGFV---PNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLC 501

Query: 166 KIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
           + G++    + L        +PN ++F+  +     + D S    V   M+  G +P+  
Sbjct: 502 ENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPF 561

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            +  LL   CK     EA +LL  +  +  ++   ++  LI    +   L  A  L+E+M
Sbjct: 562 TYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEM 621

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD-MLESEGHAPDLVFHNVLIDCLSKMGS 340
           +QN   P+  TYT ++ G +       AF FL  +++ E    + + +   ID L K G 
Sbjct: 622 IQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQ 681

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNA 397
              AL ++  + E  L  D     S+       G+      L+       V  +L  +N 
Sbjct: 682 SKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNI 741

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTP-------------------------------- 425
           LL  + +        KLYN M   GF P                                
Sbjct: 742 LLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAES 801

Query: 426 ---DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD------------ 470
              D+ +F  L+R  C    +D+ I++   + +   +++     A+ D            
Sbjct: 802 STIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYF 861

Query: 471 -----------------------RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
                                  R+   G    A +L  + +     LD  +    +RGL
Sbjct: 862 VFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGL 921

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
              G+ EEA  +  +M  +   P   T+  ++  FCK+ N K    L   +   R++LD
Sbjct: 922 ALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLD 980



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 110/544 (20%), Positives = 215/544 (39%), Gaps = 82/544 (15%)

Query: 97   TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWR-GEMYGMVLEAFDEMGRFGFTPNTF 155
             G+       +  ++R+G V  + TF   +  Y   G+  G     FD M   G  P+ F
Sbjct: 503  NGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSG-AFSVFDRMISCGHHPSPF 561

Query: 156  ARNIVMDVLFKIGRVDLGIKVLKETQ-LP---NFLSFNIALCNLCKLNDVSNVKDVIGMM 211
                ++ VL K        K+LK+   +P   + +S+N  +  + K  ++     +   M
Sbjct: 562  TYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEM 621

Query: 212  VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLG-LMITLGTSLSVNAWTVLIDGFRRLRR 270
            ++    P+   +  +L+   + GR+  A+  LG LM     +L+   +T  IDG  +  +
Sbjct: 622  IQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQ 681

Query: 271  LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME-AKMFSIAFSFLDMLESEGHAPDLVFHN 329
               A YL+++M + G S +++   S+  G+    K+FS A S +    ++   P+L   N
Sbjct: 682  SKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFS-ASSLISKTRNKNVIPNLTTFN 740

Query: 330  VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE 389
            +L+   S+         +Y+ +      P+  T+ SL+  +C  G   L  K++     E
Sbjct: 741  ILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAE 800

Query: 390  A---DLVVYNALLSYFCKAGFPNQAVKLYNTM---------------------------- 418
            +   D + +N L+   C+    ++ + L + M                            
Sbjct: 801  SSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNY 860

Query: 419  -------LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
                   L KGF P +  +  +++ +C    I  A  +   +V    +++     A+V  
Sbjct: 861  FVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRG 920

Query: 472  LIEAGRCHKAIQLFRRAI-VEKYP----------------------------------LD 496
            L   G+  +A+ + +R + ++K P                                  LD
Sbjct: 921  LALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLD 980

Query: 497  VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
            +V+Y V I      G    A   Y ++K   + PN  TYRV++ +   +  +   + +L+
Sbjct: 981  IVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLK 1040

Query: 557  DVID 560
            D+ D
Sbjct: 1041 DLND 1044


>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
 gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
          Length = 457

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 110/447 (24%), Positives = 205/447 (45%), Gaps = 23/447 (5%)

Query: 112 RVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD 171
           R GC   + TF   +  + +    G      + M   G  PN  + N +++ L K+ R  
Sbjct: 3   RTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWH 62

Query: 172 LGIKVLKE------TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEI 225
              +++++         P+ ++++  L   CK   V   ++++  ++ +G  P+  M+  
Sbjct: 63  EAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTK 122

Query: 226 LLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
           ++   CK  R+ EA +LL  MI  G   ++  +  LI G  R + L+MA  L + M  +G
Sbjct: 123 VMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASG 182

Query: 286 CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL 345
              +VVTY +L+ G  +A     A   L+ +++ G APD+V ++  +  L K G   +A 
Sbjct: 183 VKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAH 242

Query: 346 DVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV--------CGLEVEADLVVYNA 397
            V + + +    P+  T+ ++L  +C SG+     +++        CGL V    V Y+ 
Sbjct: 243 QVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNV----VGYST 298

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
           ++   CK G   +A  +   M   G  PD  ++  L+ GLC A KI+EA+   + + M  
Sbjct: 299 VVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEG 358

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLFRR-----AIVEKYPLDVVSYTVAIRGLLEGGR 512
              NA  + ++V  L   GR  +A ++           +  P  V +Y   I GL + GR
Sbjct: 359 CKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGR 418

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVML 539
            ++A   + +M+     P+  +Y  ++
Sbjct: 419 IDDALKFFQRMRSQGCDPDGVSYSTIV 445



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 110/430 (25%), Positives = 200/430 (46%), Gaps = 21/430 (4%)

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLND 200
           M R G  PN+   N +++   K GR     ++L+        PN +S+N  L  LCKL  
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 201 VSNVKDVIGMMVRKG--FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
               ++++  M+ +G    P++  +  LL+ +CK G++ E+ +LL  +I+ G       +
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
           T ++    +  RL  A  L E+M++ GC P ++T+ +LI G    K   +A S L  + +
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF-- 376
            G   D+V +N L+D L K G   +A  + + +      PD   + S +  +C SG+   
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 377 --SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK---GFTPDNYSFV 431
              +L ++    + + ++V YN +L   CK+G  + A+++   M      G     YS V
Sbjct: 241 AHQVLEQMR-DSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTV 299

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
             + GLC   +  EA +V + +       +   ++++V+ L +AG+  +A++  R   +E
Sbjct: 300 --VDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAME 357

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIA-----VPPNAYTYRVMLLSFCKER 546
               + V+Y   + GL   GR  EA  +  +M          PP+  TY  ++   CK  
Sbjct: 358 GCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAG 417

Query: 547 NIKMVKRLLQ 556
            I    +  Q
Sbjct: 418 RIDDALKFFQ 427



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 128/263 (48%), Gaps = 9/263 (3%)

Query: 184 NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
           + +++N  +  LCK   +   + ++  M   G  P+V  +   +   CK G++  A+Q+L
Sbjct: 186 DVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVL 245

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQ-NGCSPNVVTYTSLIKGFME 302
             M       +V  +  ++DG  +  ++D A  + E+M   +GC  NVV Y++++ G  +
Sbjct: 246 EQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCK 305

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
                 A S ++ +   G  PD+V ++ L++ L K G  ++A++    +      P++ T
Sbjct: 306 LGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVT 365

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGL--------EVEADLVVYNALLSYFCKAGFPNQAVKL 414
           +CSL+  +C  GR +   ++V  +             +  YNAL+   CKAG  + A+K 
Sbjct: 366 YCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKF 425

Query: 415 YNTMLDKGFTPDNYSFVGLLRGL 437
           +  M  +G  PD  S+  ++ GL
Sbjct: 426 FQRMRSQGCDPDGVSYSTIVEGL 448



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/286 (25%), Positives = 137/286 (47%), Gaps = 5/286 (1%)

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           M + GC PN VT+ +L+ GF +          L+ + + G  P++V +N L++ L K+  
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 341 YDDALDVYDGLLEL--KLVPDSYTFCSLLSTVCLSGRFSL---LPKLVCGLEVEADLVVY 395
           + +A ++   ++    +  PD  T+ +LLS  C +G+      L K V    +  D ++Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
             +++  CK+    +A++L   M+  G  P   +F  L+ G C  + ++ A ++ Q +  
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
           +    +   +  ++D L +AGR  +A QL  R        DVV+Y+  + GL + G+   
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 516 AYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
           A+ +  QM+     PN  TY  +L   CK   I     +++ +  +
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASS 286



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 122/271 (45%), Gaps = 17/271 (6%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV +++ ++  + +  GR +    ++  +   GC      +  F+    +    G VL A
Sbjct: 186 DVVTYNTLMDGLCK-AGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKS---GKVLNA 241

Query: 142 ---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP-----NFLSFNIALC 193
               ++M      PN    N ++D L K G++D  ++++++         N + ++  + 
Sbjct: 242 HQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVD 301

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
            LCKL      + V+  M R G  P+V  +  L+N  CK G+I EA + +  M   G   
Sbjct: 302 GLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKP 361

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQ-----NGCSPNVVTYTSLIKGFMEAKMFSI 308
           +   +  L+ G     RL  A  + E+M       + C P+V TY +LI G  +A     
Sbjct: 362 NAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDD 421

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
           A  F   + S+G  PD V ++ +++ L++ G
Sbjct: 422 ALKFFQRMRSQGCDPDGVSYSTIVEGLARSG 452



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 2/211 (0%)

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           V +NAL++ F K G P    +L  TM  +G  P+  S+ GLL GLC   +  EA  + + 
Sbjct: 11  VTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRD 70

Query: 453 IVMNNPAVNAHV--HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
           ++         +  ++ ++    +AG+  ++ +L +  I      D + YT  +  L + 
Sbjct: 71  MISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKS 130

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
            R  EA  L  +M      P   T+  ++   C+E+N++M   LLQ +  + ++ D  T 
Sbjct: 131 ARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTY 190

Query: 571 IRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
             L   + K      A   L  M   G  PD
Sbjct: 191 NTLMDGLCKAGRLQEAEQLLERMKASGCAPD 221


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 110/410 (26%), Positives = 195/410 (47%), Gaps = 10/410 (2%)

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFK---IGRVDLGIKVLKETQL-PNFLSFNIALCN 194
           LEAF   G + +  +  + N ++  L K    G V+   K +   ++ PN ++FN  +  
Sbjct: 180 LEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVING 239

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ---LLGLMITLGT 251
           LCK+  ++   DV+  M   GF+PNV  +  L++ +CKMGR+ + Y+   +L  M+    
Sbjct: 240 LCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKV 299

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
           S +   + VLIDGF +   L  A  ++E+M   G  P VVTY SL+ G       + A  
Sbjct: 300 SPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKV 359

Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
            LD + S    P+++ +N LI+   K    ++A +++D + +  L P+  TF +LL   C
Sbjct: 360 LLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYC 419

Query: 372 LSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
             G+     LL K++       +   YN L+  FC+ G   +   L N M  +G   D  
Sbjct: 420 KFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTV 479

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
           ++  L+   C  ++  +A  +   ++      +   +  +++     G    A+ L ++ 
Sbjct: 480 TYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQM 539

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
             E    +VV+Y V I+G    G+ E+A  L ++M    + PN  TY ++
Sbjct: 540 EKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEII 589



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 97/381 (25%), Positives = 181/381 (47%), Gaps = 6/381 (1%)

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGL 245
           LS N  L  L K N+   V+ V   M+R+   PN+  F  ++N  CK+G++ +A  ++  
Sbjct: 196 LSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDD 255

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLD---MAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           M   G   +V  +  LIDG+ ++ R+     A  + ++MV+N  SPN VT+  LI GF +
Sbjct: 256 MKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCK 315

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
            +  S A    + ++S+G  P +V +N L++ L   G  ++A  + D +L   L P+  T
Sbjct: 316 DENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVIT 375

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTML 419
           + +L++  C         +L   +  +    +++ +N LL  +CK G   +A  L   ML
Sbjct: 376 YNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVML 435

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
           +KGF P+  ++  L+ G C   K++E  N+   +       +   +  ++    E     
Sbjct: 436 EKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPK 495

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
           KA +L    + +      ++Y + + G    G    A  L  QM+      N  TY V++
Sbjct: 496 KAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLI 555

Query: 540 LSFCKERNIKMVKRLLQDVID 560
             +C++  ++    LL ++++
Sbjct: 556 QGYCRKGKLEDANGLLNEMLE 576



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 75/324 (23%), Positives = 155/324 (47%), Gaps = 8/324 (2%)

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
           LSV +   L+    +        +++++M++   SPN++T+ ++I G  +    + A   
Sbjct: 193 LSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDV 252

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDD---ALDVYDGLLELKLVPDSYTFCSLLST 369
           +D ++  G  P++V +N LID   KMG       A  +   ++E K+ P+S TF  L+  
Sbjct: 253 VDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDG 312

Query: 370 VCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
            C     S   K+   ++ +     +V YN+L++  C  G  N+A  L + ML     P+
Sbjct: 313 FCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPN 372

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
             ++  L+ G C  + ++EA  ++  I       N      ++    + G+  +A  L +
Sbjct: 373 VITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAF-LLQ 431

Query: 487 RAIVEK-YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
           + ++EK +  +  +Y   I G    G+ EE   L ++M+   V  +  TY +++ ++C++
Sbjct: 432 KVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEK 491

Query: 546 RNIKMVKRLLQDVIDARIELDYHT 569
           +  K   RL+ +++D  ++  + T
Sbjct: 492 KEPKKAARLIDEMLDKGLKPSHLT 515



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 166/355 (46%), Gaps = 20/355 (5%)

Query: 256 NAWTVL-IDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           N+ TVL ++ F+R      AG    K+    C+P     ++L+K   E +   + F + +
Sbjct: 173 NSKTVLGLEAFKR------AGDYRYKLSVLSCNP---LLSALVK---ENEFGGVEFVYKE 220

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
           M+  +  +P+L+  N +I+ L K+G  + A DV D +      P+  T+ +L+   C  G
Sbjct: 221 MIRRK-ISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMG 279

Query: 375 RFSLLPKLVCGLE------VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
           R   + K    L+      V  + V +N L+  FCK    + A+K++  M  +G  P   
Sbjct: 280 RVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVV 339

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
           ++  L+ GLC   K++EA  +   ++ +N   N   + A+++   +     +A +LF   
Sbjct: 340 TYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNI 399

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
             +    +V+++   + G  + G+ EEA++L   M      PNA TY  +++ FC+E  +
Sbjct: 400 GKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKM 459

Query: 549 KMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           + VK LL ++    ++ D  T   L     +      A   + EM + GL P  +
Sbjct: 460 EEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHL 514



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/276 (22%), Positives = 124/276 (44%), Gaps = 12/276 (4%)

Query: 80  FHDVQSFDHMISVVTRLT--------GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWR 131
           F ++QS     +VVT  +        G+    + ++ E+          T+   +  Y +
Sbjct: 326 FEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCK 385

Query: 132 GEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD----LGIKVLKETQLPNFLS 187
            ++     E FD +G+ G TPN    N ++    K G+++    L   +L++  LPN  +
Sbjct: 386 KKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNAST 445

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           +N  +   C+   +  VK+++  M  +G   +   + IL++ +C+     +A +L+  M+
Sbjct: 446 YNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEML 505

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
             G   S   + +L++G+     L  A  L ++M + G   NVVTY  LI+G+       
Sbjct: 506 DKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLE 565

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
            A   L+ +  +G  P+   + ++ + + + G   D
Sbjct: 566 DANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLPD 601


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 124/519 (23%), Positives = 230/519 (44%), Gaps = 67/519 (12%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET 180
           T+ + +  + +       L  F++M  F   PN    N+V++ L K        +VLKE 
Sbjct: 9   TWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAYEVLKEM 67

Query: 181 Q-----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMV-RKGFYPNVRMFEILLNCFCKMG 234
           +      P+ ++++  +   CK  ++    +++  MV R G  P+V  +  +++  C+ G
Sbjct: 68  RDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDG 127

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGC-SPNVVTY 293
           ++  A +++  M   G       ++ LI G+   R++D A  L+++++ +    P+VVTY
Sbjct: 128 KMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTY 187

Query: 294 TSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE 353
           T+LI GF ++     A   L ++E     P++V ++ L+  L K G  D ALD++  +  
Sbjct: 188 TALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTS 247

Query: 354 LKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQ 410
              VP+  T+ +L+  +C + +     LL   +       D V YNALL  +C+ G   +
Sbjct: 248 KGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEE 307

Query: 411 AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
           A +L+  M  K   PD  ++  L+RG C A +++EA       ++ N    A +      
Sbjct: 308 AKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEA-----RFLLENMKTAAGIDP---- 358

Query: 471 RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
                                    DVV+Y++ + G     R  EA     +M    V P
Sbjct: 359 -------------------------DVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAP 393

Query: 531 NAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQL 590
           NA TY  ++   CK   +     +L+++++ R+E    T          F+S   A+ +L
Sbjct: 394 NAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGT----------FNSVIGALCRL 443

Query: 591 VEMCNLGLIPDEMWRKLGLLSDETMTP-----VSLFDGF 624
            +M       DE W+ L  ++   + P      +L +GF
Sbjct: 444 GDM-------DEAWKLLVAMAAHGLEPGMVTYTTLLEGF 475



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 171/351 (48%), Gaps = 9/351 (2%)

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
           P V  + I+++ FCK  ++ +A      M     + +   + V+++G  + R L    Y 
Sbjct: 5   PTVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKAR-LTSKAYE 62

Query: 278 WEKMVQNGCS--PNVVTYTSLIKGFMEAKMFSIAFSFL-DMLESEGHAPDLVFHNVLIDC 334
             K +++G S  P++VTY+++I GF +      A   L +M+  +G APD+V +  ++D 
Sbjct: 63  VLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDG 122

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEA 390
           L + G  D A ++   +    + PD +TF +L++  C + +      L  +++     + 
Sbjct: 123 LCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKP 182

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           D+V Y AL+  FCK+G   +A+K+   M  +   P+  ++  LL GLC A  +D+A++++
Sbjct: 183 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLF 242

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
           + +       N   +T ++  L  A +   A  L         P D VSY   + G    
Sbjct: 243 RRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRL 302

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
           GR EEA  L+ +M   +  P+  TY  ++  FC    ++  + LL+++  A
Sbjct: 303 GRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTA 353



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 111/456 (24%), Positives = 193/456 (42%), Gaps = 54/456 (11%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV ++  ++  + R  G+ +    +V E+   G      TF   +  +         L+ 
Sbjct: 112 DVVTYTSVVDGLCR-DGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKL 170

Query: 142 FDE-MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLC 196
           + E +    + P+      ++D   K G ++  +K+L   +    +PN ++++  L  LC
Sbjct: 171 YKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLC 230

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
           K  D+    D+   M  KG  PNV  +  L++  C   ++  A  L+  M          
Sbjct: 231 KAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTV 290

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM--------------- 301
           ++  L+DG+ RL R++ A  L+++M    C P+ +TYT L++GF                
Sbjct: 291 SYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENM 350

Query: 302 ---------------------EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
                                 AK F  A  F+  + +   AP+ V ++ LID L K G 
Sbjct: 351 KTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGR 410

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNA 397
            D A++V   ++  ++ P   TF S++  +C  G      KL+  +    +E  +V Y  
Sbjct: 411 VDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTT 470

Query: 398 LLSYFCKAGFPNQAVKLYNTM--------LDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
           LL  F + G    A +L+  M              P+  +F  L+RGLC AR+ID+A+ V
Sbjct: 471 LLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQ-AFSALIRGLCKAREIDKAMAV 529

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
            + +             AIVD L+ AGR  +A +L 
Sbjct: 530 VEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLI 565



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 142/282 (50%), Gaps = 8/282 (2%)

Query: 286 CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL 345
           C P VVT+T +I GF +A     A +  + +  E  AP+   +NV+++ L K      A 
Sbjct: 3   CQPTVVTWTIIIDGFCKANQLKQALACFEKMR-EFVAPNERTYNVVVNGLCKARLTSKAY 61

Query: 346 DVYDGLLELKLV-PDSYTFCSLLSTVCLSGRF----SLLPKLVCGLEVEADLVVYNALLS 400
           +V   + + K V PD  T+ ++++  C  G       +L ++V    +  D+V Y +++ 
Sbjct: 62  EVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVD 121

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP-A 459
             C+ G  ++A ++   M  KG  PD ++F  L+ G C ARK+DEA+ +Y+ I+ ++   
Sbjct: 122 GLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWK 181

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            +   +TA++D   ++G   KA+++       K   +VV+Y+  + GL + G  ++A  L
Sbjct: 182 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 241

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
           + +M      PN  TY  ++   C    +    RLL D + A
Sbjct: 242 FRRMTSKGCVPNVVTYTTLIHGLCAAHKVD-AARLLMDEMTA 282


>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g19440, chloroplastic-like [Cucumis sativus]
          Length = 799

 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 108/435 (24%), Positives = 202/435 (46%), Gaps = 7/435 (1%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFL 186
           +G      +E F +M + G +PN    N +++ L + GR+D   ++ ++  +    PN  
Sbjct: 232 KGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLK 291

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           ++   +  L KLN    V  ++  M+  GF PNV +F  L++ +CKMG I  A ++  +M
Sbjct: 292 TYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVM 351

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
           I+   + +      L+ GF +  +++ A    E+++ +G S +     S++    +   +
Sbjct: 352 ISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRY 411

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
             AF F  M+ S    P  +   +L+  L K G + +A +++  LLE        T  +L
Sbjct: 412 HSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNAL 471

Query: 367 LSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           +  +C +G+     ++V  +    +  D + YNAL+  FC  G      +L   M  +G 
Sbjct: 472 IHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGI 531

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
            PD Y++  LLRGLC   K+D+AI ++     +    N H +  +++   +A R      
Sbjct: 532 QPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVEN 591

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           LF   + +K  L+ + Y + I+   + G    A  L   MK   + PN  TY  ++   C
Sbjct: 592 LFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVC 651

Query: 544 KERNIKMVKRLLQDV 558
               ++  K L+ ++
Sbjct: 652 NIGLVEDAKHLIDEM 666



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 118/470 (25%), Positives = 210/470 (44%), Gaps = 39/470 (8%)

Query: 170 VDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
           VD+   + ++   P+  + N  L +L K N+     +V  +M  +G  P+V  F  ++N 
Sbjct: 171 VDVFYLLARKGTFPSLKTCNFXLSSLVKANEFEKCCEVFRVM-SEGACPDVFSFTNVINA 229

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
            CK G++  A +L   M  LG S +V  +  +I+G  +  RLD A  L EKM   G  PN
Sbjct: 230 LCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPN 289

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
           + TY +LI G ++   F      LD +   G  P++V  N LID   KMG+ + AL + D
Sbjct: 290 LKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKD 349

Query: 350 GLLELKLVPDSYTFCSLLSTVCLSGRF-----SLLPKLVCGLEVEADL------------ 392
            ++   + P S T  SL+   C S +      +L   L  GL +  D             
Sbjct: 350 VMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKF 409

Query: 393 ---------------------VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
                                ++   L+   CK G   +A +L+  +L+KG      +  
Sbjct: 410 RYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSN 469

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            L+ GLCGA K+ EA  + + ++     ++   + A++      G+     +L       
Sbjct: 470 ALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKR 529

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
               D+ +Y   +RGL   G+ ++A  L+ + K   +  N +TY +M+  +CK   I+ V
Sbjct: 530 GIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDV 589

Query: 552 KRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           + L  +++  ++EL+      + K   +  + ++A+  L  M + G++P+
Sbjct: 590 ENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPN 639



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 111/527 (21%), Positives = 202/527 (38%), Gaps = 91/527 (17%)

Query: 95  RLTGRFE-----TVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFG 149
           RL   FE     TV+G+   L   G +I     L F         +  V    DEM   G
Sbjct: 270 RLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNF---------FDKVNHILDEMIGAG 320

Query: 150 FTPNTFARNIVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCKLNDVSNVK 205
           F PN    N ++D   K+G ++  +K+    + +   P  ++    +   CK + + + +
Sbjct: 321 FNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAE 380

Query: 206 DVI-----------------------------------GMMVRKGFYPNVRMFEILLNCF 230
           + +                                    MM+ + F P+  +  +L+   
Sbjct: 381 NALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGL 440

Query: 231 CKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNV 290
           CK G+  EA +L   ++  G+  S      LI G     +L  A  + ++M++ G   + 
Sbjct: 441 CKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDR 500

Query: 291 VTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDG 350
           +TY +LI GF         F   + +   G  PD+  +N L+  L  +G  DDA+ ++D 
Sbjct: 501 ITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDE 560

Query: 351 LLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAG- 406
                L+ + +T+  ++   C + R   +  L   L   ++E + +VYN ++   C+ G 
Sbjct: 561 FKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGN 620

Query: 407 ----------------FPN------------------QAVKLYNTMLDKGFTPDNYSFVG 432
                            PN                   A  L + M  +GF P+   +  
Sbjct: 621 VAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTA 680

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           L+ G C   ++D A + +  ++  N   N   +T ++D   + G   KA  L  +     
Sbjct: 681 LIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESG 740

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
              DVV+Y V   G  +    + A+ +  QM    +P +  TY  ++
Sbjct: 741 IVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLV 787



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/348 (23%), Positives = 145/348 (41%), Gaps = 44/348 (12%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTF-LLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
            G+      IV E+   G  +   T+  L L     G++ G      +EM + G  P+ +
Sbjct: 478 AGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEG-CFRLREEMTKRGIQPDIY 536

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
             N ++  L  +G++D  IK+  E +    + N  ++ I +   CK N + +V+++   +
Sbjct: 537 TYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNEL 596

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
           + K    N  ++ I++   C+ G +A A QLL                            
Sbjct: 597 LSKKMELNSIVYNIIIKAHCQNGNVAAALQLL---------------------------- 628

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
                  E M   G  PN  TY+SLI G     +   A   +D +  EG  P++V +  L
Sbjct: 629 -------ENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTAL 681

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---V 388
           I    K+G  D A   +  ++   + P+ +T+  ++   C  G       L+  ++   +
Sbjct: 682 IGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGI 741

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
             D+V YN L + FCKA   + A K+ + M  +G   D  ++  L+ G
Sbjct: 742 VPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHG 789


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 112/478 (23%), Positives = 211/478 (44%), Gaps = 8/478 (1%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFL 186
           + + Y  V    ++M  FG  P+ +  NI+++    + R+        K+LK    P+  
Sbjct: 81  KTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTA 140

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           +F   +  LC    + +   +   M+ +GF PNV  +  L+N  CK+G    A +LL  M
Sbjct: 141 TFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSM 200

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
                   V  +T +ID   + R++  A  L+ KMV  G SP++ TYTSLI        +
Sbjct: 201 EQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEW 260

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
               + L+ + +    PD+V  + ++D L K G   +A DV D ++   + P+  T+ +L
Sbjct: 261 KHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNAL 320

Query: 367 LSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           +   CL        K+   +       +++ YN L++ +CK    ++A  L+  M  K  
Sbjct: 321 MDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKEL 380

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
            P+  ++  L+   C   ++ +AI ++  +V +    +   +  ++D L +     +A+ 
Sbjct: 381 IPNTVTYNTLMH-XCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMA 439

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           L +         D+  YT+ I G+   G  E A  ++S +    + PN  TY +M+   C
Sbjct: 440 LLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLC 499

Query: 544 KERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           +   +    +L  ++       D  T   +T+ + +   +  A+  L EM   G   D
Sbjct: 500 RRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSAD 557



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 98/387 (25%), Positives = 188/387 (48%), Gaps = 4/387 (1%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+ + FN  L ++ K      V  +   M   G  P+V    IL+N FC + R+  A+ +
Sbjct: 67  PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSV 126

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           L  ++ LG       +T LI G     ++  A +L++KM+  G  PNVVTY +LI G  +
Sbjct: 127 LAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCK 186

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
               + A   L  +E     PD+V +  +ID L K     +A +++  ++   + PD +T
Sbjct: 187 VGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFT 246

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
           + SL+ ++C    +  +  L+  +   ++  D+V+++ ++   CK G   +A  + + M+
Sbjct: 247 YTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMI 306

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
            +G  P+  ++  L+ G C   ++DEA+ V+  +V N  A N   +  +++   +  R  
Sbjct: 307 IRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMD 366

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
           KA  LF     ++   + V+Y   +      GR ++A  L+ +M      P+  TYR++L
Sbjct: 367 KATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQDAIALFHEMVAHGQIPDLATYRILL 425

Query: 540 LSFCKERNIKMVKRLLQDVIDARIELD 566
              CK+ ++     LL+ +  + ++ D
Sbjct: 426 DYLCKKSHLDEAMALLKTIEGSNMDPD 452



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 107/482 (22%), Positives = 212/482 (43%), Gaps = 49/482 (10%)

Query: 74  AKQRDYF---HDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYW 130
           + Q D F    DV + + +I+    L  R      ++ ++ ++G      TF   +R   
Sbjct: 92  SNQMDSFGIPPDVYTLNILINSFCHL-NRLGFAFSVLAKILKLGHQPDTATFTTLIRGLC 150

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-------- 182
                G  L  FD+M   GF PN      +++ L K+G  +  I++L+  +         
Sbjct: 151 VEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVV 210

Query: 183 -------------------------------PNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
                                          P+  ++   + +LC L +  +V  ++  M
Sbjct: 211 VYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQM 270

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
           +     P+V +F  +++  CK G+I EA+ ++ +MI  G   +V  +  L+DG      +
Sbjct: 271 INSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEM 330

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFME-AKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           D A  +++ MV NG +PNV++Y +LI G+ +  +M    + F +M + E   P+ V +N 
Sbjct: 331 DEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKE-LIPNTVTYNT 389

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLE 387
           L+     +G   DA+ ++  ++    +PD  T+  LL  +C          L K + G  
Sbjct: 390 LMH-XCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSN 448

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
           ++ D+ +Y  ++   C+AG    A  +++ +  KG  P+  ++  ++ GLC    +DEA 
Sbjct: 449 MDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEAN 508

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            ++  +  N  + +   +  I   L++     +AIQL +  +   +  DV + T+ +  L
Sbjct: 509 KLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEML 568

Query: 508 LE 509
            +
Sbjct: 569 CD 570



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/335 (23%), Positives = 144/335 (42%), Gaps = 5/335 (1%)

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           LD A   + +M+     P+ V +  L+    + K +   FS  + ++S G  PD+   N+
Sbjct: 50  LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 109

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLVCGL 386
           LI+    +     A  V   +L+L   PD+ TF +L+  +C+ G+      L  K++ G 
Sbjct: 110 LINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMI-GE 168

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
             + ++V Y  L++  CK G  N A++L  +M      PD   +  ++  LC  R++ EA
Sbjct: 169 GFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEA 228

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
            N++  +V    + +   +T+++  L           L  + I  K   DVV ++  +  
Sbjct: 229 FNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDA 288

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           L + G+  EA+ +   M    V PN  TY  ++   C +  +    ++   ++      +
Sbjct: 289 LCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPN 348

Query: 567 YHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
             +   L     K      A     EMC   LIP+
Sbjct: 349 VISYNTLINGYCKIQRMDKATYLFEEMCQKELIPN 383



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 111/231 (48%), Gaps = 3/231 (1%)

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVY 395
            + DDAL  ++ +L +   P +  F  LL+++  + ++  +  L   ++   +  D+   
Sbjct: 48  NTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTL 107

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
           N L++ FC       A  +   +L  G  PD  +F  L+RGLC   KI +A++++  ++ 
Sbjct: 108 NILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIG 167

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
                N   +  +++ L + G  + AI+L R         DVV YT  I  L +  +  E
Sbjct: 168 EGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTE 227

Query: 516 AYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           A+ L+S+M    + P+ +TY  ++ S C     K V  LL  +I+++I  D
Sbjct: 228 AFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPD 278



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 102/209 (48%), Gaps = 10/209 (4%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET----QLPNFLSFNIALCNLCK 197
           F+EM +    PNT   N +M     +GR+   I +  E     Q+P+  ++ I L  LCK
Sbjct: 372 FEEMCQKELIPNTVTYNTLMHXC-HVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCK 430

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            + +     ++  +      P+++++ I+++  C+ G +  A  +   + + G   +V  
Sbjct: 431 KSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRT 490

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T++I+G  R   LD A  L+ +M  NGCSP+  TY ++ +G ++ K    A   L  + 
Sbjct: 491 YTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEML 550

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALD 346
           + G + D+    +L++ L      DD LD
Sbjct: 551 ARGFSADVSTTTLLVEMLC-----DDKLD 574


>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
 gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
          Length = 375

 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 167/342 (48%), Gaps = 7/342 (2%)

Query: 115 CVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI 174
           C     T+ + +         G  ++  DEMG  G  P+    N++++ + K GR+D  I
Sbjct: 12  CYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAI 71

Query: 175 KVLKET----QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCF 230
           K L         PN ++ NI L ++C      + + ++  MVRKG  P+V  F IL+N  
Sbjct: 72  KFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFL 131

Query: 231 CKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNV 290
           C+ G +  A  +L  M T G + +  ++  L+ GF + +++D A    E MV  GC P++
Sbjct: 132 CRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDI 191

Query: 291 VTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDG 350
           VTY +++    +      A   L+ L S+G +P L+ +N +ID LSK+G  D A+++   
Sbjct: 192 VTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHE 251

Query: 351 LLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGF 407
           +    L PD  T+ SL++ +   G+     K    V G  V+ +   YN+++   CKA  
Sbjct: 252 MRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQ 311

Query: 408 PNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            ++A+     M+ KG  P   S+  L+ G+       EA+ +
Sbjct: 312 TDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALEL 353



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/350 (26%), Positives = 165/350 (47%), Gaps = 3/350 (0%)

Query: 177 LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
           L++   P+ +++ I +   C  + V     ++  M  +G  P+V  + +L+N  CK GR+
Sbjct: 8   LEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRL 67

Query: 237 AEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSL 296
            EA + L  M + G+  +V    +++       R   A  L  +MV+ GCSP+VVT+  L
Sbjct: 68  DEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNIL 127

Query: 297 IKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
           I       +   A   L+ + + G  P+ + +N L+    K    D A+   + ++    
Sbjct: 128 INFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGC 187

Query: 357 VPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVK 413
            PD  T+ ++L+ +C  G+     +L+  L  +     L+ YN ++    K G  +QAV+
Sbjct: 188 YPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVE 247

Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
           L + M  KG  PD  ++  L+ GL    K++EAI  +  +       NA  + +I+  L 
Sbjct: 248 LLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLC 307

Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM 523
           +A +  +AI      I +      VSYT+ I G+   G  +EA  L +++
Sbjct: 308 KAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNEL 357



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 87/351 (24%), Positives = 160/351 (45%), Gaps = 9/351 (2%)

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           V  +T+LI+       +  A  L ++M   GC P+VVTY  L+ G  +      A  FL+
Sbjct: 16  VITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFLN 75

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            + S G  P+++ HN+++  +   G + DA  +   ++     P   TF  L++ +C  G
Sbjct: 76  SMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKG 135

Query: 375 RFSLLPKLVCGLE------VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
              LL + +  LE         + + YN LL  FCK    ++A++    M+ +G  PD  
Sbjct: 136 ---LLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIV 192

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
           ++  +L  LC   K+D A+ +   +     +     +  ++D L + G+  +A++L    
Sbjct: 193 TYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEM 252

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
             +    DV++Y+  I GL   G+ EEA   +  ++   V PNA+TY  ++   CK +  
Sbjct: 253 RGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQT 312

Query: 549 KMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLI 599
                 L  +I    +    +   L + I     +  A+  L E+C+ G++
Sbjct: 313 DRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVV 363



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 74/320 (23%), Positives = 144/320 (45%), Gaps = 19/320 (5%)

Query: 60  CPSDLIALSFFI--WCAKQR-----DYFHDVQSFDHMISVVTR--------LTGRFETVR 104
           C  D++  +  +   C + R      + + + S+    +V+T          TGR+    
Sbjct: 47  CKPDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAE 106

Query: 105 GIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVL 164
            ++ E+ R GC     TF + +    R  + G  ++  ++M   G TPN+ + N ++   
Sbjct: 107 KLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGF 166

Query: 165 FKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV 220
            K  ++D  I+ L+        P+ +++N  L  LCK   V    +++  +  KG  P +
Sbjct: 167 CKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVL 226

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
             +  +++   K+G+  +A +LL  M   G    V  ++ LI G  R  +++ A   +  
Sbjct: 227 ITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHD 286

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           +   G  PN  TY S++ G  +A+    A  FL  + S+G  P  V + +LI+ ++  G 
Sbjct: 287 VEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGL 346

Query: 341 YDDALDVYDGLLELKLVPDS 360
             +AL++ + L    +V  S
Sbjct: 347 AKEALELLNELCSRGVVKKS 366



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 89/214 (41%)

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
           E   D++ Y  L+   C      QA+KL + M  +G  PD  ++  L+ G+C   ++DEA
Sbjct: 11  ECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEA 70

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
           I     +       N   H  I+  +   GR   A +L    + +     VV++ + I  
Sbjct: 71  IKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINF 130

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           L   G    A  +  +M      PN+ +Y  +L  FCKE+ +    + L+ ++      D
Sbjct: 131 LCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPD 190

Query: 567 YHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
             T   +   + K     +AV  L ++ + G  P
Sbjct: 191 IVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSP 224



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 39/191 (20%), Positives = 80/191 (41%), Gaps = 5/191 (2%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
            R  + D+ +++ M++ + +  G+ +    ++ +L+  GC     T+   +    +    
Sbjct: 184 SRGCYPDIVTYNTMLTALCK-DGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKT 242

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIA 191
              +E   EM   G  P+    + ++  L + G+V+  IK   + +     PN  ++N  
Sbjct: 243 DQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSI 302

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           +  LCK        D +  M+ KG  P    + IL+      G   EA +LL  + + G 
Sbjct: 303 MFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGV 362

Query: 252 SLSVNAWTVLI 262
               +A  V++
Sbjct: 363 VKKSSAEQVVV 373


>gi|302780731|ref|XP_002972140.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
 gi|300160439|gb|EFJ27057.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
          Length = 482

 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 113/420 (26%), Positives = 199/420 (47%), Gaps = 8/420 (1%)

Query: 158 NIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           ++++  L K GR +  +KV+K      QL      NI + +LCK + +   +     +  
Sbjct: 35  DLLVRELSKAGRAEECLKVVKLMLDRQQLRERHLVNITIDSLCKSDMIDKAESWFQELKD 94

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
                N   + IL+N FCK  RI EA QL G M   G + S + +  LI G  R+ RL  
Sbjct: 95  FRGLVNTVSYNILINAFCKTKRIDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGE 154

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A   +E+++ +G   + +TY  L+ GF +A     A   L+ L + G       +N +ID
Sbjct: 155 AQQFYERLLSSGAGASFITYNILVDGFCKADRVPEAVELLNELVARGGVVTSAPYNCIID 214

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCG-LEV--EA 390
            L K G   +A   ++ + +  + P   TF  L+  +C + R +   ++    LE     
Sbjct: 215 TLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSP 274

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
            +V+ + L+  FCK G  ++A +++  M ++G TP++ S   L+ GLC A+++ +A  V+
Sbjct: 275 SVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVF 334

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
           + +V      +   ++  +D L  A R  +A Q+    + +    DVV YT  I GL   
Sbjct: 335 EEVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSL 394

Query: 511 GRTEEAYILYS-QMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
           GR +EA  ++   M+     PN +T  V++  F     +   + L Q  ++  ++ D  T
Sbjct: 395 GRLDEARKVFEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERGVQPDCRT 454



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 99/407 (24%), Positives = 175/407 (42%), Gaps = 39/407 (9%)

Query: 51  HIVHSTLLN-CPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTR--------LTGRFE 101
           H+V+ T+ + C SD+I         K   +F +++ F  +++ V+          T R +
Sbjct: 67  HLVNITIDSLCKSDMID--------KAESWFQELKDFRGLVNTVSYNILINAFCKTKRID 118

Query: 102 TVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVM 161
               + GE+   GC     T+   +    R E  G   + ++ +   G   +    NI++
Sbjct: 119 EAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILV 178

Query: 162 DVLFKIGRVDLGIKVLKE--------TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           D   K  RV   +++L E        T  P    +N  +  L K   +   +     M +
Sbjct: 179 DGFCKADRVPEAVELLNELVARGGVVTSAP----YNCIIDTLFKKGKIHEAELFFNRMEK 234

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G  P    F +L++  CK  R+A A ++    +  G S SV   + L+DGF +   +D 
Sbjct: 235 DGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDE 294

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  ++E M   GC+PN V+   LI G  +AK  S A    + +      PD+V ++  +D
Sbjct: 295 AWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMD 354

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE---- 389
            L +    D A  V   L++    PD   + +L+S +C  GR     K+    EV+    
Sbjct: 355 GLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARKV---FEVDMRAA 411

Query: 390 ---ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
               +    N L++ F  AG  ++A +L+   +++G  PD  +F  +
Sbjct: 412 GCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERGVQPDCRTFSAM 458



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 81/384 (21%), Positives = 158/384 (41%), Gaps = 22/384 (5%)

Query: 229 CFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE--KMV---- 282
           C C +G++ EA +L   +++ G  L  +           +R L  AG   E  K+V    
Sbjct: 8   CLCHVGKLDEALELFHSLVSDGCGLPADLL---------VRELSKAGRAEECLKVVKLML 58

Query: 283 --QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
             Q     ++V  T  I    ++ M   A S+   L+      + V +N+LI+   K   
Sbjct: 59  DRQQLRERHLVNIT--IDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKR 116

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNA 397
            D+A+ ++  +      P + T+ +L+  +C   R     +    L      A  + YN 
Sbjct: 117 IDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNI 176

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
           L+  FCKA    +AV+L N ++ +G    +  +  ++  L    KI EA   +  +  + 
Sbjct: 177 LVDGFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDG 236

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAY 517
                   T ++D L +A R  +A ++F   +       VV  +  + G  + G  +EA+
Sbjct: 237 VRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAW 296

Query: 518 ILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFI 577
            ++  M +    PN  +  +++   CK + +   + + ++V+  + + D  T       +
Sbjct: 297 RIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGL 356

Query: 578 FKFHSSSSAVNQLVEMCNLGLIPD 601
            + H    A   L  + + G  PD
Sbjct: 357 CRAHRVDQARQVLCMLVDKGGTPD 380



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 91/199 (45%), Gaps = 5/199 (2%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCKLNDVSNV 204
           G +P+    + +MD   K G VD   ++ +        PN +S NI +  LCK   +S  
Sbjct: 271 GGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQA 330

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
           ++V   +V++   P+V  +   ++  C+  R+ +A Q+L +++  G +  V  +T LI G
Sbjct: 331 REVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISG 390

Query: 265 FRRLRRLDMAGYLWE-KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP 323
              L RLD A  ++E  M   GC+PN  T   L+ GF  A     A          G  P
Sbjct: 391 LCSLGRLDEARKVFEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERGVQP 450

Query: 324 DLVFHNVLIDCLSKMGSYD 342
           D    + + +  +K   +D
Sbjct: 451 DCRTFSAMANNTAKTEGWD 469



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 65/320 (20%), Positives = 125/320 (39%), Gaps = 54/320 (16%)

Query: 334 CLSKMGSYDDALDVYDGLLE--------------------------LKLVPD-------- 359
           CL  +G  D+AL+++  L+                           +KL+ D        
Sbjct: 8   CLCHVGKLDEALELFHSLVSDGCGLPADLLVRELSKAGRAEECLKVVKLMLDRQQLRERH 67

Query: 360 --SYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
             + T  SL  +  +    S   +L        + V YN L++ FCK    ++A++L+  
Sbjct: 68  LVNITIDSLCKSDMIDKAESWFQELK-DFRGLVNTVSYNILINAFCKTKRIDEAIQLFGE 126

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           M   G  P   ++  L+ GLC   ++ EA   Y+ ++ +    +   +  +VD   +A R
Sbjct: 127 MKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKADR 186

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
             +A++L    +     +    Y   I  L + G+  EA + +++M+   V P   T+ V
Sbjct: 187 VPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTV 246

Query: 538 MLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLG 597
           ++   CK   +   K    ++  + +E     S+ +   +                C  G
Sbjct: 247 LIDGLCKANRVARAK----EIFFSYLESGGSPSVVICSCLMD------------GFCKYG 290

Query: 598 LIPDEMWRKLGLLSDETMTP 617
            + DE WR   L+++   TP
Sbjct: 291 GV-DEAWRIFELMTNRGCTP 309



 Score = 45.8 bits (107), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 41/191 (21%), Positives = 76/191 (39%), Gaps = 45/191 (23%)

Query: 135 YGMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET----QLPNFLS 187
           YG V EA   F+ M   G TPN  + NI+++ L K  R+    +V +E       P+ ++
Sbjct: 289 YGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVT 348

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAE--------- 238
           ++  +  LC+ + V   + V+ M+V KG  P+V M+  L++  C +GR+ E         
Sbjct: 349 YSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARKVFEVDM 408

Query: 239 ---------------------------AYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
                                      A +L    +  G       ++ + +   +    
Sbjct: 409 RAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERGVQPDCRTFSAMANNTAKTEGW 468

Query: 272 DMAGYLWEKMV 282
           D+  Y W + +
Sbjct: 469 DI--YSWNEWI 477


>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
          Length = 716

 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 131/614 (21%), Positives = 262/614 (42%), Gaps = 54/614 (8%)

Query: 38  ATTHQDFPIILAPHI-VHSTLLNCPSDL----IALSFFIWCAKQRDYFHDVQSFDHMISV 92
           A +    P +L+P    ++ L++C +      +AL+FF    +      D+   +H++  
Sbjct: 101 AASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRT-GLRVDIIIANHLLKG 159

Query: 93  VTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGF-- 150
                   E +  ++     +GCV    ++ + L+        G   +    M   G   
Sbjct: 160 FCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVC 219

Query: 151 TPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKD 206
           +P+  A   V+D  FK G V+    + KE       P+ ++++  +  LCK   +   + 
Sbjct: 220 SPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEA 279

Query: 207 VIGMMVRKGFYPN--------------------VRMFE---------------ILLNCFC 231
            +  MV KG  P+                    VR+F+               +L+   C
Sbjct: 280 FLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLC 339

Query: 232 KMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVV 291
           K G+I EA  +   M   G +  V ++ ++++G+     L     L++ M+ +G +P++ 
Sbjct: 340 KYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIY 399

Query: 292 TYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGL 351
           T++ LIK +    M   A    + +   G  PD+V +  +I  L ++G  DDA++ ++ +
Sbjct: 400 TFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQM 459

Query: 352 LELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV-----EADLVVYNALLSYFCKAG 406
           ++  + PD Y +  L+   C  G      +L+  LE+       D+V ++++++  CK G
Sbjct: 460 IDQGVAPDKYAYHCLIQGFCTHGSLLKAKELI--LEIMNNGMRLDIVFFSSIINNLCKLG 517

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
               A  +++  ++ G  PD   +  L+ G C   K+++A+ V+  +V      N  V+ 
Sbjct: 518 RIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYG 577

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
            +V+   + GR  + + LFR  + +      + Y + I GL   GRT  A + + +M   
Sbjct: 578 TLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTES 637

Query: 527 AVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSA 586
            +  N  TY ++L  F K R       L +++    +++D  T   +   +F+      A
Sbjct: 638 GIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEA 697

Query: 587 VNQLVEMCNLGLIP 600
            +    +   GL+P
Sbjct: 698 KDLFASISRSGLVP 711



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 93/426 (21%), Positives = 168/426 (39%), Gaps = 76/426 (17%)

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA-- 309
           S + + + +L+D   R  R ++A   + ++++ G   +++    L+KGF EAK    A  
Sbjct: 112 SPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALD 171

Query: 310 ---------------FSFLDMLES------------------EGHA---PDLVFHNVLID 333
                          FS+  +L+S                  EG A   PD+V +  +ID
Sbjct: 172 ILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVID 231

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS---GRFSLLPKLVCGLEVEA 390
           C  K G  + A D++  +++  + PD  T+ S++  +C +   G+     + +    V  
Sbjct: 232 CFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLP 291

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           D   YN L+  +   G   +AV+++  M      PD  +   L+  LC   KI EA +V+
Sbjct: 292 DNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVF 351

Query: 451 QGIVM--NNP---------------------------------AVNAHVHTAIVDRLIEA 475
             + M   NP                                 A + +  + ++      
Sbjct: 352 DTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANC 411

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
           G   KA+ +F          DVV+YT  I  L   G+ ++A   ++QM    V P+ Y Y
Sbjct: 412 GMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAY 471

Query: 536 RVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCN 595
             ++  FC   ++   K L+ ++++  + LD      +   + K      A N      N
Sbjct: 472 HCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVN 531

Query: 596 LGLIPD 601
           +G  PD
Sbjct: 532 VGQHPD 537



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 125/290 (43%), Gaps = 23/290 (7%)

Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPK-----LVCGLEVEADLVVYNALLSYFCKAGFPNQ 410
           L P S+T+  L+     + R  L        L  GL V  D+++ N LL  FC+A   ++
Sbjct: 111 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRV--DIIIANHLLKGFCEAKRTDE 168

Query: 411 AVK-LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY----QGIVMNNPAVNAHVH 465
           A+  L +   + G  PD +S+  LL+ LC   K  +A ++     +G  + +P V A+  
Sbjct: 169 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAY-- 226

Query: 466 TAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKH 525
           T ++D   + G  +KA  LF+  +    P D+V+Y+  +  L +     +A     QM +
Sbjct: 227 TTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVN 286

Query: 526 IAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSS 585
             V P+ +TY  ++  +      K   R+ +++    I  D  T   L   + K+     
Sbjct: 287 KGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKE 346

Query: 586 AVNQLVEMCNLGLIPDEMWRKL--------GLLSDET-MTPVSLFDGFVP 626
           A +    M   G  PD    K+        G L D T +  + L DG  P
Sbjct: 347 ARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAP 396


>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
          Length = 1627

 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 134/542 (24%), Positives = 238/542 (43%), Gaps = 44/542 (8%)

Query: 65   IALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVG-CVIKAQTFL 123
            + + FF W AK+R+Y HD  ++  +I  +  +  ++  +  ++ E+ R   CV+      
Sbjct: 1095 VKMQFFRWAAKRRNYEHDTSTYMALIHCL-EVVEQYGEMWKMIQEMVRNPICVVTPTELS 1153

Query: 124  LFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP 183
              +R+    +M    +  F ++      P   A N ++ +L   G+ +      K  QL 
Sbjct: 1154 DVVRMLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYE------KVHQLY 1207

Query: 184  NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
            N +S     C                       +P+   +  L++ FCK+GR   A QLL
Sbjct: 1208 NEMSTE-GHC-----------------------FPDTVTYSALISAFCKLGRRDSAIQLL 1243

Query: 244  GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
              M  +G   +   +T+LI  F +      A  L+E+M    C P+V TYT LI+G  +A
Sbjct: 1244 NEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKA 1303

Query: 304  KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
                 A+ F   ++ EG  PD VF N +I+ L K G  DDA+ ++  +  L+ +P   T+
Sbjct: 1304 GRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTY 1363

Query: 364  CSLLSTVCLS-GRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
             +++  +  S  R S +P     ++   +      Y+ L+  FCK     +A+ L   M 
Sbjct: 1364 NTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMD 1423

Query: 420  DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
            +KGF P   ++  L+  L  A++ D A  ++Q +  N  + +A V+  ++  L +AGR  
Sbjct: 1424 EKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLD 1483

Query: 480  KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
             AI +F          DV +Y   + GL   G  +EA     +M+     P+  +Y ++L
Sbjct: 1484 DAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIIL 1543

Query: 540  LSFCK----ERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCN 595
                K     R ++M+  + Q  +   + + Y+T +        F  +S  +    EM  
Sbjct: 1544 NGLAKTGGPHRAMEMLSNMKQSTVRPDV-VSYNTVLGALSHAGMFEEASKLMK---EMNT 1599

Query: 596  LG 597
            LG
Sbjct: 1600 LG 1601



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 92/380 (24%), Positives = 165/380 (43%), Gaps = 48/380 (12%)

Query: 268  LRRLDMAGYLW---EKMVQNGCSPNVVTYTSL---IKGFMEAKMFSIAFSFLDMLESEGH 321
            L  ++  G +W   ++MV+N     VVT T L   ++    AKM   A +    +++   
Sbjct: 1123 LEVVEQYGEMWKMIQEMVRNPIC--VVTPTELSDVVRMLGNAKMVRQAITIFYQIKTRKC 1180

Query: 322  APDLVFHNVLIDCLSKMGSYDDALDVYDGL-LELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
             P    +N +I  L   G Y+    +Y+ +  E    PD+ T+ +L+S  C  GR     
Sbjct: 1181 QPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAI 1240

Query: 381  KLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
            +L+  ++   ++    +Y  L++ F K    + A+ L+  M  +   PD +++  L+RGL
Sbjct: 1241 QLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGL 1300

Query: 438  CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
              A +IDEA + +  +       +      +++ L +AGR   A++LF+     +    V
Sbjct: 1301 GKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSV 1360

Query: 498  VSYTVAIRGLLEG-GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
            V+Y   I+ L E   R  E    + +MK   + P+++TY +++  FCK   ++    LL+
Sbjct: 1361 VTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLE 1420

Query: 557  DV---------------IDA-----RIELDYH-----------TSIR----LTKFIFKFH 581
            ++               IDA     R +L              +S R    + K + K  
Sbjct: 1421 EMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAG 1480

Query: 582  SSSSAVNQLVEMCNLGLIPD 601
                A+N   EM  LG  PD
Sbjct: 1481 RLDDAINMFDEMNKLGCAPD 1500



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/314 (20%), Positives = 140/314 (44%), Gaps = 11/314 (3%)

Query: 65   IALSFFIWCAKQRDYFH-DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFL 123
            I  ++  +C  QR+    D    ++MI+ + +  GR +    +  E+  + C+    T+ 
Sbjct: 1306 IDEAYHFFCEMQREGCRPDTVFMNNMINFLGK-AGRLDDAMKLFQEMETLRCIPSVVTYN 1364

Query: 124  LFLRIYWRGEMYGMVLEA-FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL 182
              ++  +  +     + + F+ M   G +P++F  +I++D   K  R++  + +L+E   
Sbjct: 1365 TIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDE 1424

Query: 183  PNFLSFNIALCNLCKLNDVSNVK------DVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
              F     A C+L  ++ +   K      ++   +       + R++ +++    K GR+
Sbjct: 1425 KGFPPCPAAYCSL--IDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRL 1482

Query: 237  AEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSL 296
             +A  +   M  LG +  V A+  L+ G  R   LD A     +M ++GC P++ +Y  +
Sbjct: 1483 DDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNII 1542

Query: 297  IKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
            + G  +      A   L  ++     PD+V +N ++  LS  G +++A  +   +  L  
Sbjct: 1543 LNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGF 1602

Query: 357  VPDSYTFCSLLSTV 370
              D  T+ S+L  +
Sbjct: 1603 EYDLITYSSILEAI 1616


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 115/465 (24%), Positives = 207/465 (44%), Gaps = 24/465 (5%)

Query: 151 TPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPN----------FLSFNIALCNLCKLND 200
            P+  +   V+D L K GRV+  +++  + +LP+             +NI +  LC+ + 
Sbjct: 244 APDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDR 303

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
           +     +   M  +   P+   + IL++   K G++ +A  L   ++  G + S  A+T 
Sbjct: 304 IDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTS 363

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           LI G       D A  L+  M + GC P+ VTY  +I    +  M   A   +  +  +G
Sbjct: 364 LIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDG 423

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC--------- 371
           H PD+V +N ++D L K    ++AL +++ +  L   P+  +  +++  +C         
Sbjct: 424 HVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQAC 483

Query: 372 ----LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
               L   F LL ++     V  D+V Y+ L+S  C     + A  L   M+ +   P  
Sbjct: 484 QRGKLDEAFRLLKRMTDDGHV-PDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTV 542

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
            +   L+ GLC A +I EA  V   +V +  + +   +  +V     AG+  +A +L   
Sbjct: 543 VTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSD 602

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN 547
            +      +VV+YT  + GL +  R  EA  +++QMK     PN +TY  ++L FC    
Sbjct: 603 MVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQ 662

Query: 548 IKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVE 592
           +    +L  +++ A I  D+     L   + K   S+ A+  L E
Sbjct: 663 VDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILRE 707



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/435 (24%), Positives = 191/435 (43%), Gaps = 54/435 (12%)

Query: 164 LFKIGRVDLGIKVLKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
           L   GR+D  ++V +E +  P  ++ N+ L   C    V   ++++  M  +   P+   
Sbjct: 190 LMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVS 249

Query: 223 FEILLNCFCKMGRIAEAYQLLGL--------------------MITLG------------ 250
           +  +L+  CK GR+ EA +L G                     ++ LG            
Sbjct: 250 YCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQ 309

Query: 251 -------TSLSVNAWT--VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
                   ++S ++W+  +LIDG  +  +L+ A  L++K++ +G +P+ V YTSLI G  
Sbjct: 310 MFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLC 369

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
            A  F  A      +   G  P  V +NV+ID   K G  ++A D+   ++E   VPD  
Sbjct: 370 MANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVV 429

Query: 362 TFCSLLSTVCLSGR-------FSLLPKLVCGLEVEADLVVYNAL-----LSYFCKAGFPN 409
           T+ +++  +C S R       F+ + +L C     +   +   L     +   C+ G  +
Sbjct: 430 TYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLD 489

Query: 410 QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
           +A +L   M D G  PD  ++  L+ GLC   ++D+A ++ + +V             ++
Sbjct: 490 EAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLI 549

Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
             L +AGR  +A ++    +      DVV+Y   + G    G+TE A  L S M    + 
Sbjct: 550 HGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLA 609

Query: 530 PNAYTYRVMLLSFCK 544
           PN  TY  ++   CK
Sbjct: 610 PNVVTYTALVSGLCK 624



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 117/449 (26%), Positives = 199/449 (44%), Gaps = 51/449 (11%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFD---EMGRFGFTP 152
           +   F+  R +  ++ R GC     T+ + +    +    GM+ EA D   +M   G  P
Sbjct: 370 MANSFDDARELFADMNRRGCPPSPVTYNVMIDASCK---RGMLEEACDLIKKMIEDGHVP 426

Query: 153 NTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVI 208
           +    N VMD L K  RV+  + +  E +     PN  S N  +  LC+ + +       
Sbjct: 427 DVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQA---- 482

Query: 209 GMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRL 268
                                 C+ G++ EA++LL  M   G    V  ++ LI G   +
Sbjct: 483 ----------------------CQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSI 520

Query: 269 RRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH 328
            R+D A +L E MV+  C P VVT  +LI G  +A     A   LD + S G +PD+V +
Sbjct: 521 ARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTY 580

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV 388
           N L+    + G  + A ++   ++   L P+  T+ +L+S +C + R   LP+  CG+  
Sbjct: 581 NTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANR---LPE-ACGVFA 636

Query: 389 E-------ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
           +        +L  Y AL+  FC AG  +  +KL+  M+  G +PD+  +  L   LC + 
Sbjct: 637 QMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSG 696

Query: 442 KIDEAINVYQG--IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
           +   A+ + +     + + A    V+   VD L+EAG+   A+  F R +V    L    
Sbjct: 697 RSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALG-FVRDMVRGGQLPAPE 755

Query: 500 YTVA-IRGLLEGGRTEEAYILYSQMKHIA 527
              + + GL + G+  EA  +  ++  +A
Sbjct: 756 RCASLVAGLCKSGQGGEARAVLEEIMDLA 784



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 124/566 (21%), Positives = 226/566 (39%), Gaps = 60/566 (10%)

Query: 92  VVTRLTGRFET--VRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFG 149
           ++  L+ R ET  V+ +V  +   GC   + TF   L    +           DEM R  
Sbjct: 50  LIDSLSKRQETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEM-RSR 108

Query: 150 FTPNTFA-RNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVI 208
             P  FA  + +   L   G ++   ++L+   + N  ++NI +  LCK   V +  ++ 
Sbjct: 109 MIPPYFATSSFLAHELCLRGSMERAFQLLEIMPVANSSAYNIVVVALCKAARVDDALELA 168

Query: 209 GMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRL 268
             M  K         + +L      GRI EA Q+          +++N   VL++GF   
Sbjct: 169 RTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLN---VLLEGFCSR 225

Query: 269 RRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA------------------------- 303
            ++D A  L   M    C+P+ V+Y +++ G  +A                         
Sbjct: 226 GQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSP 285

Query: 304 ---KMFSI-------------AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
              + ++I             A    + +     +PD   + +LID L+K G  +DA ++
Sbjct: 286 PSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNL 345

Query: 348 YDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCK 404
           +  LL   + P +  + SL+  +C++  F    +L   +         V YN ++   CK
Sbjct: 346 FQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCK 405

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV 464
            G   +A  L   M++ G  PD  ++  ++ GLC + +++EA+ ++  +       N   
Sbjct: 406 RGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRS 465

Query: 465 HTAI---------VDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
           H  I         +D+  + G+  +A +L +R   + +  DVV+Y+  I GL    R ++
Sbjct: 466 HNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDD 525

Query: 516 AYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTK 575
           A  L   M      P   T   ++   CK   IK  + +L  ++ +    D  T   L  
Sbjct: 526 ARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVH 585

Query: 576 FIFKFHSSSSAVNQLVEMCNLGLIPD 601
              +   +  A   L +M   GL P+
Sbjct: 586 GHCRAGQTERARELLSDMVARGLAPN 611



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 98/446 (21%), Positives = 191/446 (42%), Gaps = 55/446 (12%)

Query: 151 TPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCKLNDVSNVKD 206
           +P     N+++D L K    +   K+++        P+  +F   LC LCK   +   + 
Sbjct: 41  SPYPDVYNVLIDSLSKRQETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAEL 100

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
           V+  M  +   P       L +  C  G +  A+QLL +M    +S    A+ +++    
Sbjct: 101 VMDEMRSRMIPPYFATSSFLAHELCLRGSMERAFQLLEIMPVANSS----AYNIVVVALC 156

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
           +  R+D A  L   M +        +  S++ G M++     A   L +       P LV
Sbjct: 157 KAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEA---LQVYRENRREPCLV 213

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL 386
             NVL++     G  D A ++   + + +  PD  ++C++L  +C +GR     +L    
Sbjct: 214 TLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDR 273

Query: 387 EV---------EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
           E+            L  YN ++   C+    ++AV+++  M ++  +PD++S+  L+ GL
Sbjct: 274 ELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGL 333

Query: 438 CGARKIDEAINVYQ-------------------GIVMNNPAVNAH--------------- 463
             A K+++A N++Q                   G+ M N   +A                
Sbjct: 334 AKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSP 393

Query: 464 -VHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQ 522
             +  ++D   + G   +A  L ++ I + +  DVV+Y   + GL +  R EEA +L+++
Sbjct: 394 VTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNE 453

Query: 523 MKHIAVPPNAYTYRVMLLSFCKERNI 548
           M+ +   PN  ++  ++L  C++  I
Sbjct: 454 MERLGCTPNRRSHNTIILGLCQQSKI 479



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/423 (22%), Positives = 174/423 (41%), Gaps = 77/423 (18%)

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M ++G +P   +F  ++  +C +GR  EA ++  LM    +    + + VLID   + + 
Sbjct: 1   MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYP-DVYNVLIDSLSKRQE 59

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP------- 323
            +    + + MV  GC P+  T+T+++ G  +A     A   +D + S    P       
Sbjct: 60  TEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSF 119

Query: 324 ------------------------DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
                                   +   +N+++  L K    DDAL++   + E ++   
Sbjct: 120 LAHELCLRGSMERAFQLLEIMPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLA 179

Query: 360 SYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
           + +  S+L  +  SGR     ++      E  LV  N LL  FC  G  ++A +L   M 
Sbjct: 180 AGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMP 239

Query: 420 DKGFTPDNYSFVGLLRGLCGA--------------------------------------- 440
           D+   PD  S+  +L GLC A                                       
Sbjct: 240 DEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLC 299

Query: 441 --RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
              +IDEA+ +++ +   N + ++  +  ++D L +AG+ + A  LF++ +        V
Sbjct: 300 QNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTV 359

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK----ERNIKMVKRL 554
           +YT  I GL      ++A  L++ M     PP+  TY VM+ + CK    E    ++K++
Sbjct: 360 AYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKM 419

Query: 555 LQD 557
           ++D
Sbjct: 420 IED 422


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 127/510 (24%), Positives = 232/510 (45%), Gaps = 48/510 (9%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTF-LLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           G  E    I  E+   G  +   T+  +   I   GEM    +  F+EM   G  P+T+ 
Sbjct: 360 GNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEM-AKAMSLFNEMLMAGIEPDTWT 418

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N+++D   K   +    ++L E +     P+  ++++ +  LC  +D+    +V+  M+
Sbjct: 419 YNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMI 478

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
           R G  PNV M+  L+  + +  R   A +LL +MI  G    +  +  LI G  R ++++
Sbjct: 479 RNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVE 538

Query: 273 MAGYL-----------------------------------WEKMVQNGCSPNVVTYTSLI 297
            A  L                                   ++ M+ +G  PN V YT LI
Sbjct: 539 EAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILI 598

Query: 298 KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
           KG  +      A S    +  +G  PD+  ++ +I  LSK G   +A+ V+   L+  +V
Sbjct: 599 KGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVV 658

Query: 358 PDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSY--FCKAGFPNQAV 412
           PD + + SL+S  C  G      +L   +    +  ++VVYN L++   +CK+G   +A 
Sbjct: 659 PDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAF 718

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
           KL++ M+ KG +PD Y +  L+ G      +++A++++          +     +++D  
Sbjct: 719 KLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHE-AQQKSVGSLSAFNSLIDSF 777

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
            + G+  +A +LF   + +K   ++V+YT+ I    +    EEA  L+  M+   + PN 
Sbjct: 778 CKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNT 837

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
            TY  +LLS+ +  N   +  L +D ++AR
Sbjct: 838 LTYTSLLLSYNQIGNRFKMISLFKD-MEAR 866



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 126/526 (23%), Positives = 232/526 (44%), Gaps = 55/526 (10%)

Query: 125 FLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-- 182
            +R   +  M G+  + +  M      P+ +    V+    K+G V  G  VL E +   
Sbjct: 213 LMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKEC 272

Query: 183 -PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
            PN  ++N  +  LC+   V    +V  +M+ KG  P+   + +L++ FCK  R  EA  
Sbjct: 273 KPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKL 332

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           +   M + G + +   +T LIDGF +   ++ A  + ++M+  G   NVVTY ++I G  
Sbjct: 333 IFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIA 392

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           +A   + A S  + +   G  PD   +N+LID   K      A ++   +   KL P  +
Sbjct: 393 KAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPF 452

Query: 362 TFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           T+  L+S +C S       +++  +    V+ ++ +Y  L+  + +      A++L   M
Sbjct: 453 TYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIM 512

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEA----------------------INVY------ 450
           +  G  PD + +  L+ GLC A+K++EA                      IN+Y      
Sbjct: 513 IANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEI 572

Query: 451 ------------QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
                        GIV NN      ++T ++    + G   +A+  F+  + +    D+ 
Sbjct: 573 QVAERYFKDMLSSGIVPNNV-----IYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIR 627

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           +Y+  I  L + G+T+EA  ++ +     V P+ + Y  ++  FCKE +I+   +L  ++
Sbjct: 628 AYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEM 687

Query: 559 IDARIELD---YHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           +   I  +   Y+T I    +  K  + + A     EM + G+ PD
Sbjct: 688 LHNGINPNIVVYNTLINDYGYC-KSGNLTEAFKLFDEMISKGISPD 732



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 111/457 (24%), Positives = 201/457 (43%), Gaps = 37/457 (8%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCKLNDVSNV 204
           GF P     N +M  L K   + L  KV    ++   +P+  ++   +   CK+ DV   
Sbjct: 202 GFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKG 261

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
           K V+  M  K   PN+  +   +   C+ G + EA ++  LM+  G     + +T+L+DG
Sbjct: 262 KMVLSEM-EKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDG 320

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
           F + +R   A  ++E M  +G +PN  TYT+LI GF++      A    D + + G   +
Sbjct: 321 FCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLN 380

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVC 384
           +V +N +I  ++K G    A+ +++ +L   + PD++T                      
Sbjct: 381 VVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWT---------------------- 418

Query: 385 GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
                     YN L+  + K+    +A +L   M  +  TP  +++  L+ GLC +  + 
Sbjct: 419 ----------YNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQ 468

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
           +A  V   ++ N    N  ++  ++   ++  R   AI+L +  I      D+  Y   I
Sbjct: 469 KANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLI 528

Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
            GL    + EEA +L   M    + PNA+TY   +  + K   I++ +R  +D++ + I 
Sbjct: 529 IGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIV 588

Query: 565 LDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            +      L K      ++  A++    M   GLIPD
Sbjct: 589 PNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPD 625



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 114/507 (22%), Positives = 204/507 (40%), Gaps = 43/507 (8%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNL 195
           E  D+M R G  PN F    ++    +  R ++ I++LK       LP+   +N  +  L
Sbjct: 472 EVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGL 531

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVR---------------------------------- 221
           C+   V   K ++  M  KG  PN                                    
Sbjct: 532 CRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNN 591

Query: 222 -MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
            ++ IL+   C +G   EA      M+  G    + A++ +I    +  +   A  ++ K
Sbjct: 592 VIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLK 651

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS--KM 338
            ++ G  P+V  Y SLI GF +      A    D +   G  P++V +N LI+     K 
Sbjct: 652 FLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKS 711

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA--DLVVYN 396
           G+  +A  ++D ++   + PD Y +C L+      G       L    + ++   L  +N
Sbjct: 712 GNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFN 771

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
           +L+  FCK G   +A +L++ M+DK  TP+  ++  L+     A  ++EA  ++  +   
Sbjct: 772 SLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETR 831

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
           N   N   +T+++    + G   K I LF+         D ++Y V      + G++ EA
Sbjct: 832 NIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEA 891

Query: 517 YILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKF 576
             L ++     +      +  ++   CKE+ I  V  LL ++    + L   T   L   
Sbjct: 892 LKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLG 951

Query: 577 IFKFHSSSSAVNQLVEMCNLGLIPDEM 603
            +K  +   A   L  M  LG +P  +
Sbjct: 952 FYKSGNEDEASKVLGVMQRLGWVPTSL 978



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/371 (21%), Positives = 168/371 (45%), Gaps = 58/371 (15%)

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
           I LCN   ++   N+ + + +  RK   P + + + L+ C+ + G               
Sbjct: 128 IRLCNSGLIHQADNMLEKL-LQTRK---PPLEILDSLVRCYREFG--------------- 168

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           G++L+V  + + ID FR L  L+ A  ++   +  G  P ++   +L++  ++A M  + 
Sbjct: 169 GSNLTV--FDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLF 226

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
           +                                    VY  ++E K+VPD YT+ +++  
Sbjct: 227 WK-----------------------------------VYGSMVEAKIVPDVYTYTNVIKA 251

Query: 370 VCLSGRFSLLPKLVCGLEVE--ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
            C  G       ++  +E E   +L  YNA +   C+ G  ++A+++   M++KG  PD 
Sbjct: 252 HCKVGDVIKGKMVLSEMEKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDG 311

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
           +++  L+ G C  ++  EA  +++ +  +    N   +TA++D  I+ G   +A+++   
Sbjct: 312 HTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDE 371

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN 547
            I     L+VV+Y   I G+ + G   +A  L+++M    + P+ +TY +++  + K  +
Sbjct: 372 MITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHD 431

Query: 548 IKMVKRLLQDV 558
           +     LL ++
Sbjct: 432 MAKACELLAEM 442



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 81/375 (21%), Positives = 160/375 (42%), Gaps = 12/375 (3%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
           ALS F  C  ++    D++++  +I  +++  G+ +   G+  +  + G V     +   
Sbjct: 610 ALSTF-KCMLEKGLIPDIRAYSAIIHSLSK-NGKTKEAMGVFLKFLKTGVVPDVFLYNSL 667

Query: 126 LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVL--FKIGRVDLGIKVLKETQLP 183
           +  + +        + +DEM   G  PN    N +++     K G +    K+  E    
Sbjct: 668 ISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISK 727

Query: 184 NFLSFNIALCNLCK-LNDVSNVKDVIGMM--VRKGFYPNVRMFEILLNCFCKMGRIAEAY 240
                    C L        N++  + +    ++    ++  F  L++ FCK G++ EA 
Sbjct: 728 GISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEAR 787

Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
           +L   M+    + ++  +T+LID + +   ++ A  L+  M      PN +TYTSL+  +
Sbjct: 788 ELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSY 847

Query: 301 ME-AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
            +    F +   F DM E+ G A D + + V+     K G   +AL + +  L   +  +
Sbjct: 848 NQIGNRFKMISLFKDM-EARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLE 906

Query: 360 SYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYN 416
              F +L+  +C   + S + +L+  +   E+       N LL  F K+G  ++A K+  
Sbjct: 907 DDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLG 966

Query: 417 TMLDKGFTPDNYSFV 431
            M   G+ P + S  
Sbjct: 967 VMQRLGWVPTSLSLT 981



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/247 (19%), Positives = 102/247 (41%), Gaps = 36/247 (14%)

Query: 390 ADLVVYNALLSYFCKAGFPNQAV-----------------------------------KL 414
           ++L V++  +  F   GF N+A                                    K+
Sbjct: 170 SNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKV 229

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
           Y +M++    PD Y++  +++  C    + +   V   +       N   + A +  L +
Sbjct: 230 YGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQ 288

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
            G   +A+++ +  + +    D  +YT+ + G  +  R++EA +++  M    + PN +T
Sbjct: 289 TGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFT 348

Query: 535 YRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMC 594
           Y  ++  F KE NI+   R+  ++I   ++L+  T   +   I K    + A++   EM 
Sbjct: 349 YTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEML 408

Query: 595 NLGLIPD 601
             G+ PD
Sbjct: 409 MAGIEPD 415


>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 110/435 (25%), Positives = 203/435 (46%), Gaps = 13/435 (2%)

Query: 136 GMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIK-----VLKETQLPNFLS 187
           GM+ EA   F +M RF   P T + N ++    K+G+ D G+K     ++     P   +
Sbjct: 77  GMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTD-GVKRFFKDMIGAGSKPTVFT 135

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           +NI +  + K  D+   + +   M  +G  P+   +  +++ + K+GR+ +       M 
Sbjct: 136 YNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMK 195

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
           ++     V  +  LI+ F +  +L      + +M Q+G  PNVV+Y++L+  F +  M  
Sbjct: 196 SMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQ 255

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A  F   +   GH P+   +  L+D   K+G+  DA  + + +LE+ +  +  T+ +L+
Sbjct: 256 QAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALI 315

Query: 368 STVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
             +C + R     KL   +    V  +L  YNAL+  F KA   ++A++L N +  +G  
Sbjct: 316 DGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQ 375

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           PD   +   + GLCG  KI+ A  V   +  N    N  ++T ++D   ++G   + + L
Sbjct: 376 PDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHL 435

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKH-IAVPPNAYTYRVMLLSFC 543
                   + + VV++ V I GL +     +A   + +M +   + PNA  Y  M+   C
Sbjct: 436 LEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLC 495

Query: 544 KERNIKMVKRLLQDV 558
           KE  +K    L + +
Sbjct: 496 KENQVKAATTLFEQM 510



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 115/472 (24%), Positives = 209/472 (44%), Gaps = 39/472 (8%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G  E  RG+  E+   G +    T+   +  Y +       +  F+EM      P+    
Sbjct: 147 GDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITY 206

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N +++   K G++  G++  +E +     PN +S++  +   CK + +         M R
Sbjct: 207 NSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRR 266

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G  PN   +  L++  CK+G +++A++L   M+ +G   +V  +T LIDG     R+  
Sbjct: 267 VGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKE 326

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L+ KMV  G  PN+ +Y +LI GF++AK    A   L+ L+  G  PDL+ +   I 
Sbjct: 327 AEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIW 386

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLV 393
            L  +   + A  V + + E                   +G             ++A+ +
Sbjct: 387 GLCGLEKIEAAKVVMNEMQE-------------------NG-------------IKANTL 414

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
           +Y  L+  + K+G P + + L   M +        +F  L+ GLC  + + +AI+ Y G 
Sbjct: 415 IYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAID-YFGR 473

Query: 454 VMNNPAV--NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
           + N+  +  NA V+TA++D L +  +   A  LF +   E    D  +YT  + G L+ G
Sbjct: 474 MSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQG 533

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
              EA  L  +M  I +  +   Y  ++  F +   ++  +  L+++I   I
Sbjct: 534 NMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEI 585



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/424 (23%), Positives = 181/424 (42%), Gaps = 4/424 (0%)

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
           +P F  F+     L  L  +         M R   +P  R    LL+ F K+G+     +
Sbjct: 60  VPGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKR 119

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
               MI  G+  +V  + ++ID   +   ++ A  L+E+M   G  P+ VTY S+I G+ 
Sbjct: 120 FFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYG 179

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           +         F + ++S    PD++ +N LI+C  K G     L+ Y  + +  L P+  
Sbjct: 180 KVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVV 239

Query: 362 TFCSLLSTVCLSGRFSLLPKLVCGLEVEADL---VVYNALLSYFCKAGFPNQAVKLYNTM 418
           ++ +L+   C         K    +     +     Y +L+   CK G  + A +L N M
Sbjct: 240 SYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEM 299

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
           L+ G   +  ++  L+ GLC A ++ EA  ++  +V      N   + A++   ++A   
Sbjct: 300 LEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNM 359

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            +A++L           D++ Y   I GL    + E A ++ ++M+   +  N   Y  +
Sbjct: 360 DRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTL 419

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCN-LG 597
           + ++ K  N      LL+++ +   E+   T   L   + K    S A++    M N  G
Sbjct: 420 MDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFG 479

Query: 598 LIPD 601
           L P+
Sbjct: 480 LQPN 483



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 95/396 (23%), Positives = 168/396 (42%), Gaps = 20/396 (5%)

Query: 48  LAPHIV-HSTLLN--CPSDLI--ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLT-GRFE 101
           L P++V +STL++  C  D++  A+ F++     R   H    F +   V      G   
Sbjct: 234 LKPNVVSYSTLVDAFCKEDMMQQAIKFYV---DMRRVGHVPNEFTYTSLVDANCKIGNLS 290

Query: 102 TVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVM 161
               +  E+  VG      T+   +      E      + F +M   G  PN  + N ++
Sbjct: 291 DAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALI 350

Query: 162 DVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFY 217
               K   +D  +++L E +     P+ L +   +  LC L  +   K V+  M   G  
Sbjct: 351 HGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIK 410

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
            N  ++  L++ + K G   E   LL  M  L   ++V  + VLIDG  + + +  A   
Sbjct: 411 ANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDY 470

Query: 278 WEKMVQN-GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           + +M  + G  PN   YT++I G  +      A +  + +  EG  PD   +  L+D   
Sbjct: 471 FGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNL 530

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLS--TVC--LSGRFSLLPKLVCGLEVEADL 392
           K G+  +AL + D + E+ +  D   + SL+   + C  L    S L +++ G E+  D 
Sbjct: 531 KQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMI-GEEILPDE 589

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKG-FTPDN 427
           V+   +L    + G  ++AV L + ++     T DN
Sbjct: 590 VLCIGVLKKHYELGCIDEAVGLQSYLMKHQLLTSDN 625


>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
 gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
          Length = 768

 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 111/461 (24%), Positives = 211/461 (45%), Gaps = 7/461 (1%)

Query: 101 ETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIV 160
           +  +G+   +   G      T+   +  Y     +  V++   EM   G  P+     ++
Sbjct: 219 DRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVL 278

Query: 161 MDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
           +D L K GR     ++   ++++   P+   + I L        +S +   + +MVR G 
Sbjct: 279 LDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGV 338

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
            P+  +F I+ N + K   I EA  +   M     S  V  +  LID   +L R+D A  
Sbjct: 339 SPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVL 398

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
            + +M+  G +P++  ++SL+ G      +  A      +  +G   +  F N+L+  L 
Sbjct: 399 KFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLC 458

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV---CGLEVEADLV 393
           + G   +A  + D +L + + PD  ++ +L+   CL+GR     KL+     + ++ D  
Sbjct: 459 REGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEF 518

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            YN LL  +CKA   + A  L+  ML KG TP   ++  +L GL    +  EA  +Y  +
Sbjct: 519 TYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNM 578

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
           + N    + + +T I++ L       +A ++F+    +   LD+ +  + I  LL+GGR 
Sbjct: 579 INNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRK 638

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
           E+A  L++ +    + P+  TYR++  +  KE +++ +  L
Sbjct: 639 EDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDEL 679



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 122/507 (24%), Positives = 213/507 (42%), Gaps = 46/507 (9%)

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL-------KETQLPNFLSFNIALCNLCK 197
           M  FG T N  + NI++  L    R +  ++++         +  PN +++   +  LCK
Sbjct: 155 MPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDGLCK 214

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              V   K V   M+ KG  PN   +  L++ +   G+  E  Q+L  M T G       
Sbjct: 215 AQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVI 274

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           + VL+D   +  R   A  +++ +++ G  P+V  Y  L+ G+      S   SFLD++ 
Sbjct: 275 YAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMV 334

Query: 318 SEGHAPD-----------------------------------LVFHNVLIDCLSKMGSYD 342
             G +PD                                   +V +  LID L K+G  D
Sbjct: 335 RNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVD 394

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALL 399
           DA+  ++ ++   + PD + F SL+  +C   ++    KL   V    +  +   +N L+
Sbjct: 395 DAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILM 454

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
              C+ G   +A +L + ML     PD  S+  L+ G C   +IDEA  +   +V     
Sbjct: 455 CNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLK 514

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            +   +  ++    +A R   A  LFR  +++     VV+Y   + GL + GR  EA  L
Sbjct: 515 PDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKEL 574

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK 579
           Y  M +     + YTY ++L   C+   +    ++ Q +    ++LD  T   +   + K
Sbjct: 575 YLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLK 634

Query: 580 FHSSSSAVNQLVEMCNLGLIPD-EMWR 605
                 A++    +   GL+PD E +R
Sbjct: 635 GGRKEDAMDLFATISAYGLVPDVETYR 661



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 87/357 (24%), Positives = 175/357 (49%), Gaps = 8/357 (2%)

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA-WTVLIDGFRRLRRLDMA-G 275
           P+   + IL+ CFC+MGR+   +   GL++  G SL+    +  L+ G    +R+D A  
Sbjct: 90  PSSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEATD 149

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG---HAPDLVFHNVLI 332
            L  +M + GC+ NV++Y  L+KG    K    A   + M+  +G   H P++V +  +I
Sbjct: 150 ILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVI 209

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VE 389
           D L K    D A  V+  +++  + P+++T+  L+     +G++  + +++  +    ++
Sbjct: 210 DGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQ 269

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            D V+Y  LL Y CK G   +A  ++++++ KG  P    +  LL G      + E  + 
Sbjct: 270 PDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSF 329

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
              +V N  + + H+   + +   +     +A+ +F +   +     VV+Y   I  L +
Sbjct: 330 LDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCK 389

Query: 510 GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
            GR ++A + ++QM +  V P+ + +  ++   C     +  ++L  +V+D  I L+
Sbjct: 390 LGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLN 446



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/392 (22%), Positives = 178/392 (45%), Gaps = 9/392 (2%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G    +   +  + R G       F +    Y +  M    +  FD+M +   +P     
Sbjct: 321 GALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNY 380

Query: 158 NIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
             ++D L K+GRVD  +    +++ E   P+   F+  +  LC ++     + +   ++ 
Sbjct: 381 GALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLD 440

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +G   N   F IL+   C+ GR+ EA +L+ LM+ +     V ++  L+DG     R+D 
Sbjct: 441 QGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDE 500

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L + MV  G  P+  TY +L+ G+ +A+    A+S    +  +G  P +V +N ++ 
Sbjct: 501 AAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILH 560

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC----LSGRFSLLPKLVCGLEVE 389
            L ++G + +A ++Y  ++  +   D YT+  +L+ +C    +   F +   L C  +++
Sbjct: 561 GLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSL-CSKDLQ 619

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            D+   N ++    K G    A+ L+ T+   G  PD  ++  +   L     ++E   +
Sbjct: 620 LDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDEL 679

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
           +  +  N  A N+ +  A+V  L+  G   +A
Sbjct: 680 FSAMEENGTAPNSRMLNALVRWLLHRGDIGRA 711



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/262 (20%), Positives = 101/262 (38%), Gaps = 51/262 (19%)

Query: 354 LKLVPDSYTFCSLLSTVCLSGR-------FSL---------------------------- 378
           +K+ P S T+  L+   C  GR       F L                            
Sbjct: 86  VKVAPSSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVD 145

Query: 379 ---------LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG---FTPD 426
                    +P+  C L V    + YN LL   C      +A++L + M D G    TP+
Sbjct: 146 EATDILLRRMPEFGCTLNV----ISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPN 201

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
             ++  ++ GLC A+ +D A  V+Q ++      N H +T ++   +  G+  + +Q+ +
Sbjct: 202 VVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQ 261

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
                    D V Y V +  L + GR  EA  ++  +    + P+   Y ++L  +  E 
Sbjct: 262 EMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEG 321

Query: 547 NIKMVKRLLQDVIDARIELDYH 568
            +  +   L  ++   +  D+H
Sbjct: 322 ALSEMHSFLDLMVRNGVSPDHH 343



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 50/246 (20%), Positives = 98/246 (39%), Gaps = 4/246 (1%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           LTGR +    ++  +  +G      T+   L  Y +          F EM   G TP   
Sbjct: 494 LTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVV 553

Query: 156 ARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
             N ++  LF+IGR     +L + ++   +  +  ++ I L  LC+ N V     +   +
Sbjct: 554 TYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSL 613

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
             K    ++    I++    K GR  +A  L   +   G    V  + ++ +   +   L
Sbjct: 614 CSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSL 673

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           +    L+  M +NG +PN     +L++  +       A  +L  L+ +  + +    ++L
Sbjct: 674 EELDELFSAMEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTTSML 733

Query: 332 IDCLSK 337
           I   S+
Sbjct: 734 ISIYSR 739


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 142/597 (23%), Positives = 255/597 (42%), Gaps = 49/597 (8%)

Query: 48  LAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFET--VRG 105
           L P +V   ++N     +A  FF W  +Q  Y H V ++  MI    RL G  ET  V  
Sbjct: 147 LNPGLVCDVVVNQKDLHLAKCFFTWAGQQDGYSHTVGTYTLMIK---RLAGAQETDAVVQ 203

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           I+  + + G  I        LR +         LE F++M  FG  P+T   N V+++L 
Sbjct: 204 ILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLV 263

Query: 166 KIGRVDLGIKVL-KETQL---PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
           K G     + V  K  Q    P+  +F I + +  +   +    + I  M++ G  P V 
Sbjct: 264 KGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVH 323

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            F +L++   K G I EA +    M  L  S +V  +T L++G  +  RL+ A  ++ +M
Sbjct: 324 TFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEM 383

Query: 282 VQNGCSPNVVTYTSLIKG-------------FMEAK-------------MFSI------- 308
            +N CSP+ + Y +LI G             F E K             M S+       
Sbjct: 384 KENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQ 443

Query: 309 --AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL--KLVPDSYTFC 364
             A+     L+ +G  PD+  +N LID L K G  D  L +   ++E   + +    +  
Sbjct: 444 PEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNA 503

Query: 365 SLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
               T+  + R    P L  G +   + + YN L+S F   G  ++AVKL   M      
Sbjct: 504 GHEGTIEGADRTVEYPSL--GFKSLGE-ITYNTLMSAFIHNGHVDEAVKLLEVMKKHECI 560

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           P   ++  L+ GL  A ++DEA+++ + +       +   +++++    +  +  +++ L
Sbjct: 561 PTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSL 620

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
           F   + +    DV +Y++ I  L +    ++A  ++ +MK   + P    Y+ +L S  K
Sbjct: 621 FDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVK 680

Query: 545 ERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           +  I    ++  ++ ++ +  D      +   + K +    A   +  M N  ++PD
Sbjct: 681 DEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPD 737



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 192/437 (43%), Gaps = 42/437 (9%)

Query: 109  ELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIG 168
            E+ R GCV    T+ L +    + +     L+ F  M   G  P       ++  L K  
Sbjct: 623  EMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDE 682

Query: 169  RVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFE 224
            ++D  +++  E Q    +P+   +NI +  L K N V     ++  M  +   P++  + 
Sbjct: 683  KIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYT 742

Query: 225  ILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN 284
             LL+   K GR+ EA+ +   M   G    V A+T L+D   +  +L  A  ++  M + 
Sbjct: 743  SLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKK 802

Query: 285  GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
             C P+VVTY+SLI    +      A+ F +   S+G  P++  ++ LID   K G  D A
Sbjct: 803  RCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRA 862

Query: 345  LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSY 401
            L++++ +   +  P+  T+ +LLS +  +GR ++  KL+  +E      DLV YN L+  
Sbjct: 863  LELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDG 922

Query: 402  FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVN 461
              K G  ++A   +  M +KG  PD  +F  L+  L                        
Sbjct: 923  VGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESL------------------------ 958

Query: 462  AHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYS 521
                   VD+L+E      A +LF     E Y   VV+Y V I  L   G+  EA +++ 
Sbjct: 959  -----GKVDKLLE------ACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFH 1007

Query: 522  QMKHIAVPPNAYTYRVM 538
            +MK     P+  T  +M
Sbjct: 1008 EMKVKGCMPDGITIGIM 1024



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 116/536 (21%), Positives = 235/536 (43%), Gaps = 33/536 (6%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVG--CVIKAQTFLLFLRIYWRG 132
           K++    DV +++ +I V+ +  G+ + V  I+ E+   G  C+I   +           
Sbjct: 454 KEQGAVPDVFTYNTLIDVLGK-GGQMDKVLAIIKEMVEKGGECIISRDS----------N 502

Query: 133 EMYGMVLEAFD---EMGRFGFTP-NTFARNIVMDVLFKIGRVDLGIKVL----KETQLPN 184
             +   +E  D   E    GF        N +M      G VD  +K+L    K   +P 
Sbjct: 503 AGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPT 562

Query: 185 FLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLG 244
            +++   +  L K   +     ++  M ++G  P+V  +  L+  F K  +  E+  L  
Sbjct: 563 VVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFD 622

Query: 245 LMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
            M+  G    V+ ++++I+   +   +D A  ++ +M + G  P +  Y +L+   ++ +
Sbjct: 623 EMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDE 682

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
               A    + L+     PD   +N++++ L K    D+A  + D +    ++PD +T+ 
Sbjct: 683 KIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYT 742

Query: 365 SLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
           SLL  +  SGR    F++  K+      E D+V Y +L+    K G  + A+ ++  M  
Sbjct: 743 SLLDGLGKSGRLEEAFNMFTKMTEEGH-EPDVVAYTSLMDVLGKGGKLSHALIIFRAMAK 801

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
           K   PD  ++  L+  L    +++EA   ++  +      N  V+++++D   + G   +
Sbjct: 802 KRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDR 861

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
           A++LF      + P ++V+Y   + GL + GR   A  L  +M+ +   P+  TY +++ 
Sbjct: 862 ALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILID 921

Query: 541 SFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNL 596
              K   +   +   + + +  I  D  T   L + + K       V++L+E C L
Sbjct: 922 GVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGK-------VDKLLEACEL 970



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 89/307 (28%), Positives = 156/307 (50%), Gaps = 8/307 (2%)

Query: 143  DEMGRFGFTPNTFARNIVMDVLFKIGRVDLG----IKVLKETQLPNFLSFNIALCNLCKL 198
            D M      P+ F    ++D L K GR++       K+ +E   P+ +++   +  L K 
Sbjct: 727  DSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKG 786

Query: 199  NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
              +S+   +   M +K   P+V  +  L++   K GR+ EAY      I+ G + +V  +
Sbjct: 787  GKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVY 846

Query: 259  TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
            + LID F +   +D A  L+E+M +  C PN+VTY +L+ G  +A   ++A   L+ +E 
Sbjct: 847  SSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEK 906

Query: 319  EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL 378
             G  PDLV +N+LID + KMG  D+A   +  + E  +VPD  TF SL+ ++    +   
Sbjct: 907  VGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLE 966

Query: 379  LPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
              +L   +E E     +V YN L+    +AG  ++A  +++ M  KG  PD  + +G+++
Sbjct: 967  ACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGIT-IGIMK 1025

Query: 436  GLCGARK 442
             +   R+
Sbjct: 1026 RILSVRE 1032



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 97/463 (20%), Positives = 207/463 (44%), Gaps = 19/463 (4%)

Query: 152  PNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDV 207
            P       ++D L K GR+D  + +L+E +     P+ ++++  + +  K +       +
Sbjct: 561  PTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSL 620

Query: 208  IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
               MVRKG   +V  + +++NC CK   + +A  + G M   G    +  +  L+    +
Sbjct: 621  FDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVK 680

Query: 268  LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
              ++D A  ++ ++ ++   P+   Y  ++ G +++     A   +D ++++   PDL  
Sbjct: 681  DEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFT 740

Query: 328  HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVC 384
            +  L+D L K G  ++A +++  + E    PD   + SL+  +   G+ S   ++ + + 
Sbjct: 741  YTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMA 800

Query: 385  GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
                  D+V Y++L+    K G   +A   +   + KG TP+   +  L+        +D
Sbjct: 801  KKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVD 860

Query: 445  EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
             A+ +++ +       N   +  ++  L +AGR + A +L           D+V+Y + I
Sbjct: 861  RALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILI 920

Query: 505  RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ--DVIDAR 562
             G+ + G  +EA   + +MK   + P+  T+  ++ S  K      V +LL+  ++ D+ 
Sbjct: 921  DGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGK------VDKLLEACELFDSM 974

Query: 563  IELDYHTSIRLTKFIFKFHSSSSAVNQLV----EMCNLGLIPD 601
             E  Y+ S+     +      +  V++      EM   G +PD
Sbjct: 975  EEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPD 1017


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 129/612 (21%), Positives = 261/612 (42%), Gaps = 50/612 (8%)

Query: 38  ATTHQDFPIILAPHI-VHSTLLNCPSDL----IALSFFIWCAKQRDYFHDVQSFDHMISV 92
           A +    P +L+P    ++ L++C +      +AL+FF    +      D+   +H++  
Sbjct: 97  AASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRT-GLRVDIIIANHLLKG 155

Query: 93  VTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGF-- 150
                   E +  ++     +GCV    ++ + L+        G   +    M   G   
Sbjct: 156 FCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVC 215

Query: 151 TPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKD 206
           +P+  A N V+D  FK G V+    + KE       P+F++++  +  LCK   +   + 
Sbjct: 216 SPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEA 275

Query: 207 VIGMMVRKGFYPN--------------------VRMFE---------------ILLNCFC 231
            +  MV KG  PN                    VR+F+               +L+   C
Sbjct: 276 FLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLC 335

Query: 232 KMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVV 291
           K G+I EA  +   M   G +  V ++ ++++G+     L     L++ M+ +G +P + 
Sbjct: 336 KYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVIC 395

Query: 292 TYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGL 351
           T+  LIK +    M   A    + +   G  P+++ +  +I  L ++G  DDA++ ++ +
Sbjct: 396 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQM 455

Query: 352 LELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFP 408
           ++  + PD Y +  L+   C  G      +L+  +    +  D+V+++++++  CK G  
Sbjct: 456 IDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRV 515

Query: 409 NQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAI 468
             A  +++  ++ G  P    +  L+ G C   K+++A+ V+  +V      N  V+  +
Sbjct: 516 MDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTL 575

Query: 469 VDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAV 528
           V+   + GR  + + LFR  + +      + Y + I GL E GRT  A + + +M    +
Sbjct: 576 VNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGI 635

Query: 529 PPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVN 588
             N  TY ++L    K R       L +++    +++D  T   +   +F+      A +
Sbjct: 636 AMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKD 695

Query: 589 QLVEMCNLGLIP 600
               +   GL+P
Sbjct: 696 LFASISRSGLVP 707



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 116/471 (24%), Positives = 216/471 (45%), Gaps = 10/471 (2%)

Query: 140 EAF-DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCN 194
           EAF  +M   G  PN +  N ++      G+    ++V KE +    LP+ ++FN+ + +
Sbjct: 274 EAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGS 333

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           LCK   +   +DV   M  KG  P+V  + I+LN +   G + +   L  LM+  G +  
Sbjct: 334 LCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPV 393

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           +  + VLI  +     LD A  ++ +M  +G  PNV+TYT++I           A    +
Sbjct: 394 ICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFN 453

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            +  +G APD   ++ LI      GS   A ++   ++   +  D   F S+++ +C  G
Sbjct: 454 QMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLG 513

Query: 375 RF---SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
           R      +  L   + +    VVY+ L+  +C  G   +A+++++ M+  G  P++  + 
Sbjct: 514 RVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYG 573

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            L+ G C   +IDE +++++ ++      +  ++  I+D L EAGR   A   F      
Sbjct: 574 TLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTES 633

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
              ++  +Y++ +RGL +    +EA  L+ +++ + V  +  T   M+    + R ++  
Sbjct: 634 GIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEA 693

Query: 552 KRLLQDVIDARIELDYHT-SIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           K L   +  + +     T SI +T  I K      A +    M N G  PD
Sbjct: 694 KDLFASISRSGLVPCVVTYSIMITNLI-KEGLVEEAEDMFSSMQNAGCEPD 743



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/388 (19%), Positives = 159/388 (40%), Gaps = 35/388 (9%)

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA-GY 276
           P    + IL++C  +  R   A    G ++  G  + +     L+ GF   +R D A   
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDI 168

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH--APDLVFHNVLIDC 334
           L  +  + GC P+V +Y+ L+K   +      A   L M+   G   +PD+V +N +ID 
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDG 228

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVV 394
             K G  + A D++  +++  + PD                                 V 
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPD--------------------------------FVT 256

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           Y++++   CKA   ++A      M++KG  P+N+++  L+ G     +  EA+ V++ + 
Sbjct: 257 YSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMR 316

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
             +   +      ++  L + G+  +A  +F    ++    DV SY + + G    G   
Sbjct: 317 RQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLV 376

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLT 574
           +   L+  M    + P   T+ V++ ++     +     +  ++ D  ++ +  T   + 
Sbjct: 377 DMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVI 436

Query: 575 KFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
             + +      A+ +  +M + G+ PD+
Sbjct: 437 AALCRIGKMDDAMEKFNQMIDQGVAPDK 464



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/279 (20%), Positives = 113/279 (40%), Gaps = 32/279 (11%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D+  F  +I+ + +L GR    + I      VG    A  + + +  Y         L  
Sbjct: 498 DIVLFSSIINNLCKL-GRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRV 556

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDV 201
           FD M   G  PN      +++   KIGR+D G+ + +E                      
Sbjct: 557 FDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFRE---------------------- 594

Query: 202 SNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVL 261
                    M++KG  P+  ++ I+++   + GR   A      M   G +++   ++++
Sbjct: 595 ---------MLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIV 645

Query: 262 IDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH 321
           + G  + R  D A +L++++       +++T  ++I G  + +    A      +   G 
Sbjct: 646 LRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGL 705

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
            P +V ++++I  L K G  ++A D++  +      PDS
Sbjct: 706 VPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDS 744


>gi|242061252|ref|XP_002451915.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
 gi|241931746|gb|EES04891.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
          Length = 571

 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 117/490 (23%), Positives = 218/490 (44%), Gaps = 38/490 (7%)

Query: 65  IALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVG-CVIKAQTFL 123
           + + FF W AK+R+Y HD  ++  +I  +  +  ++  +  ++ E+ R   CV+      
Sbjct: 105 VKMQFFRWAAKRRNYEHDTSTYMALIHCL-EVVEQYGEMWKMIQEMVRNPICVVTPTELS 163

Query: 124 LFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP 183
             +R+    +M    +  F ++      P   A N ++ +L   G+ +            
Sbjct: 164 EVVRMLGNAKMVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYE------------ 211

Query: 184 NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF-YPNVRMFEILLNCFCKMGRIAEAYQL 242
                               V ++   M  +G  +P+   +  L++ FCK+GR   A QL
Sbjct: 212 -------------------KVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSAIQL 252

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           L  M   G   +   +T+L+  F +L  +  A  L+E+M    C P+V TYT LI+G  +
Sbjct: 253 LNEMKDNGMQPTTKIYTMLVALFFKLNDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGK 312

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
           A     A+ F   ++ EG  PD +  N +I+ L K G  DDA+ ++  +  L+ +P   T
Sbjct: 313 AGRIDEAYHFFYEMQREGCRPDTIVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVT 372

Query: 363 FCSLLSTVCLS-GRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           + +++  +  S  R S +P     ++   +      Y+ L+  FCK     +A+ L   M
Sbjct: 373 YNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEM 432

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
            +KGF P   ++  L+  L  A++ D A  ++Q +  N  + ++ V+  ++  L +AGR 
Sbjct: 433 DEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSSRVYAVMIKHLGKAGRL 492

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
             AI +F          DV +Y   + GL   G  +EA     +M+     P+  +Y ++
Sbjct: 493 DDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNII 552

Query: 539 LLSFCKERNI 548
           L    K+ ++
Sbjct: 553 LNGLQKQEDL 562



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 73/300 (24%), Positives = 144/300 (48%), Gaps = 9/300 (3%)

Query: 268 LRRLDMAGYLW---EKMVQNG-CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP 323
           L  ++  G +W   ++MV+N  C       + +++    AKM S A +    +++    P
Sbjct: 133 LEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVVRMLGNAKMVSKAIAIFYQIKTRKCQP 192

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGL-LELKLVPDSYTFCSLLSTVCLSGRFSLLPKL 382
               +N +I  L   G Y+   ++Y+ +  E    PD+ T+ +L+S  C  GR     +L
Sbjct: 193 TAQAYNSMIIMLMHEGQYEKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSAIQL 252

Query: 383 VCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
           +  ++   ++    +Y  L++ F K    + A+ L+  M  +   PD +++  L+RGL  
Sbjct: 253 LNEMKDNGMQPTTKIYTMLVALFFKLNDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGK 312

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
           A +IDEA + +  +       +  V   +++ L +AGR   A++LF+     +    VV+
Sbjct: 313 AGRIDEAYHFFYEMQREGCRPDTIVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVT 372

Query: 500 YTVAIRGLLEG-GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           Y   I+ L E   R  E    + +MK   + P+++TY +++  FCK   ++    LL+++
Sbjct: 373 YNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEM 432



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 120/258 (46%), Gaps = 21/258 (8%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           F EM R G  P+T   N +++ L K GR+D  +K+ +E      +P+ +++N  +  L +
Sbjct: 323 FYEMQREGCRPDTIVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFE 382

Query: 198 LND-VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
                S V      M   G  P+   + IL++ FCK  R+ +A  LL  M   G      
Sbjct: 383 SKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPA 442

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
           A+  LID   + +R D+A  L++++ +N  S +   Y  +IK   +A     A +  D +
Sbjct: 443 AYCSLIDALGKAKRYDLACELFQELKENCGSSSSRVYAVMIKHLGKAGRLDDAINMFDEM 502

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
              G APD+  +N L+  L++ G  D+AL     + E   +PD  ++  +L+        
Sbjct: 503 NKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILN-------- 554

Query: 377 SLLPKLVCGLEVEADLVV 394
                   GL+ + DL+V
Sbjct: 555 --------GLQKQEDLIV 564



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 83/400 (20%), Positives = 162/400 (40%), Gaps = 16/400 (4%)

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
           R+ +  +   +  L++C   + +  E ++++  M+     + V   T L +  R L    
Sbjct: 116 RRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVR--NPICVVTPTELSEVVRMLGNAK 173

Query: 273 M---AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA-PDLVFH 328
           M   A  ++ ++    C P    Y S+I   M    +       + + +EGH  PD + +
Sbjct: 174 MVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSTEGHCFPDTMTY 233

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC----LSGRFSLLPKLVC 384
           + LI    K+G  D A+ + + + +  + P +  +  L++       + G  SL  ++  
Sbjct: 234 SALISAFCKLGRRDSAIQLLNEMKDNGMQPTTKIYTMLVALFFKLNDVHGALSLFEEMRH 293

Query: 385 GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
                 D+  Y  L+    KAG  ++A   +  M  +G  PD      ++  L  A ++D
Sbjct: 294 QY-CRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMNNMINFLGKAGRLD 352

Query: 445 EAINVYQ--GIVMNNPAVNAHVHTAIVDRLIEA-GRCHKAIQLFRRAIVEKYPLDVVSYT 501
           +A+ ++Q  G +   P+V    +  I+  L E+  R  +    F R           +Y+
Sbjct: 353 DAMKLFQEMGTLRCIPSVV--TYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYS 410

Query: 502 VAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
           + I G  +  R E+A +L  +M     PP    Y  ++ +  K +   +   L Q++ + 
Sbjct: 411 ILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKEN 470

Query: 562 RIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
                      + K + K      A+N   EM  LG  PD
Sbjct: 471 CGSSSSRVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPD 510



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/238 (24%), Positives = 94/238 (39%), Gaps = 14/238 (5%)

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFT-PDNYSFVGLLRGLCGARKIDEAINVYQG 452
            YN+++      G   +  +LYN M  +G   PD  ++  L+   C   + D AI +   
Sbjct: 196 AYNSMIIMLMHEGQYEKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSAIQLLNE 255

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           +  N       ++T +V    +    H A+ LF     +    DV +YT  IRGL + GR
Sbjct: 256 MKDNGMQPTTKIYTMLVALFFKLNDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGR 315

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
            +EAY  + +M+     P+      M+    K   +    +L Q++   R      T   
Sbjct: 316 IDEAYHFFYEMQREGCRPDTIVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNT 375

Query: 573 LTKFIFKFHSSSSAVNQLVE-MCNLGLIPDEMWRKLGLLSDETMTPVSLFDGFVPCER 629
           + K +F+  S +S V    E M   G+ P             + T   L DGF    R
Sbjct: 376 IIKALFESKSRASEVPSWFERMKESGISPS------------SFTYSILIDGFCKTNR 421


>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 105/447 (23%), Positives = 209/447 (46%), Gaps = 8/447 (1%)

Query: 175 KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKM- 233
           ++L+    P+ + FN  L ++ K+   S +  +   M   G  PN+    IL+N FC + 
Sbjct: 51  RMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLN 110

Query: 234 -GRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVT 292
            G+I EA  L   MI  G    V  +  LI+G  ++     A  L   MVQ  C PNV  
Sbjct: 111 RGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFA 170

Query: 293 YTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
           Y ++I    + +  + AF+    + ++G +PD+  +N LI  L  +  +     + + ++
Sbjct: 171 YNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMV 230

Query: 353 ELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLVCGLEVEADLVVYNALLSYFCKAGFP 408
           + K++PD  +F +++  +C  G+ +    ++ K++       +++ YN L++ +CK    
Sbjct: 231 DSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRI 290

Query: 409 NQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAI 468
           ++A+ L+  M  +   PD  ++  L+ GLC   ++ +AI ++  +V  +   N   +  +
Sbjct: 291 DKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRIL 350

Query: 469 VDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAV 528
           +D L +     +A+ L +         D+    +AI G+   G  E A  L+S +    +
Sbjct: 351 LDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGL 410

Query: 529 PPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVN 588
            P+ +TY +M+   C+   +    +L +++ +    L+      +T+   + + +S A+ 
Sbjct: 411 QPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQ 470

Query: 589 QLVEMCNLGLIPDEMWRKL--GLLSDE 613
            L EM   G   D     L   +LSD+
Sbjct: 471 LLQEMVARGFSADASTMTLFVKMLSDD 497



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 93/422 (22%), Positives = 187/422 (44%), Gaps = 45/422 (10%)

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG------IKVLKETQLPNFLSF 188
           +  +L    +M  FG  PN +  +I+++    + R  +G       K++ E   P+ +++
Sbjct: 77  HSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTY 136

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
              +  LCK+ + S    ++G MV+K   PNV  +  +++  CK  ++ EA+ L   M+T
Sbjct: 137 GTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVT 196

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
            G S  +  +  LI     L        L  +MV +   P+VV++ +++    +    + 
Sbjct: 197 KGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTE 256

Query: 309 AFSFLD-MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
           A   +D M++  G  P+++ +N LI+   K+   D A+ ++  +   +L+PD+ T+ +L+
Sbjct: 257 AHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLI 316

Query: 368 STVCLSGRF-------------SLLPKLVC-------------------------GLEVE 389
             +C   R              S +P LV                          G  ++
Sbjct: 317 HGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLD 376

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            D+ V N  +   C+AG    A  L++ +  KG  PD +++  ++ GLC    +DEA  +
Sbjct: 377 PDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKL 436

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
           ++ +  N   +N  ++  I    +      +AIQL +  +   +  D  + T+ ++ L +
Sbjct: 437 FREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSD 496

Query: 510 GG 511
            G
Sbjct: 497 DG 498



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 62/270 (22%), Positives = 123/270 (45%), Gaps = 11/270 (4%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGEL-ARVGCVIKAQTFLLFLRIYWRGEMYGMVLE 140
           DV SF+ ++  + +  G+      +V ++  R GC+    ++   +  Y + +     + 
Sbjct: 237 DVVSFNTVVDALCK-EGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMY 295

Query: 141 AFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE----TQLPNFLSFNIALCNLC 196
            F EM R    P+T   + ++  L  + R+   I +  E    +Q+PN +++ I L  LC
Sbjct: 296 LFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLC 355

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
           K   ++    ++  +      P++++  I ++  C+ G +  A  L   + + G    V 
Sbjct: 356 KNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVW 415

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
            ++++I+G  R   LD A  L+ +M +NGC+ N   Y ++ +GF+     S A   L  +
Sbjct: 416 TYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEM 475

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALD 346
            + G + D     + +  LS     DD LD
Sbjct: 476 VARGFSADASTMTLFVKMLS-----DDGLD 500


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 118/519 (22%), Positives = 230/519 (44%), Gaps = 50/519 (9%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D  ++  +I V+    GR      ++ ++ R GC     T+ + L    R   +   +  
Sbjct: 142 DAYTYTPLIRVLCD-RGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAV 200

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
            DEM   G TPN    N++++ + + GRVD   ++L         P+ +S+   L  LC 
Sbjct: 201 LDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCA 260

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
                +V+++   M+ K   PN   F++L+  FC+ G +  A Q+L  M   G + +   
Sbjct: 261 SKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTL 320

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
             ++I+   +  R+D A  L   M   GC+P+ ++YT+++KG   A+ +  A   L+ + 
Sbjct: 321 CNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMV 380

Query: 318 SEGHAPD-----------------------------------LVFHNVLIDCLSKMGSYD 342
                P+                                   +V +N L++     G  D
Sbjct: 381 RNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHID 440

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALL 399
            AL+++     +   P++ T+ +LL+ +C + R     +LV  +   +   ++V +N L+
Sbjct: 441 SALELFRS---MPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLV 497

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
           S+FC+ GF  +A++L   M++ G TP+  ++  LL G+      ++A+ +  G+V    +
Sbjct: 498 SFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVS 557

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL--DVVSYTVAIRGLLEGGRTEEAY 517
            +    ++I+  L +  R  +A+QLF   +V+   +    V Y   + GL +    + A 
Sbjct: 558 PDVITFSSIIGILSKEDRIEEAVQLFH--VVQDIGMRPKAVVYNKILLGLCKRCEIDNAI 615

Query: 518 ILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
             ++ M      PN  TY +++     E  +K  + LL 
Sbjct: 616 DFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLS 654



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 115/485 (23%), Positives = 201/485 (41%), Gaps = 19/485 (3%)

Query: 127 RIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP--- 183
           R+  R ++ G V          G  P+ +    ++  L + GR     +VL+  +     
Sbjct: 49  RLIAREDLAGAVRLVERSGSCDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSP 108

Query: 184 -NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
            +  ++N  +   C+   +   + +IG M      P+   +  L+   C  GR+A+A  L
Sbjct: 109 VDVFAYNTLVAGYCRYGHLDAARRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADALSL 165

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           L  M+  G   +V  +TVL++   R    + A  + ++M   GC+PN+VTY  +I G   
Sbjct: 166 LDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCR 225

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
                 A   L+ L S G  PD V +  L+  L     +DD  +++  ++E   +P+  T
Sbjct: 226 EGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVT 285

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGLE------VEADLVVYNALLSYFCKAGFPNQAVKLYN 416
           F  L+   C  G   ++ + +  LE         +  + N +++  CK G  + A KL N
Sbjct: 286 FDMLIRFFCRGG---MVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLN 342

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
            M   G  PD  S+  +L+GLC A + D+A  +   +V NN   N       +  L + G
Sbjct: 343 DMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKG 402

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
              +AI L  +       + VV+Y   + G    G  + A  L+  M      PN  TY 
Sbjct: 403 LIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMP---CKPNTITYT 459

Query: 537 VMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNL 596
            +L   C    +     L+ +++      +  T   L  F  +      A+  + +M   
Sbjct: 460 TLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEH 519

Query: 597 GLIPD 601
           G  P+
Sbjct: 520 GCTPN 524



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 113/510 (22%), Positives = 221/510 (43%), Gaps = 45/510 (8%)

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNI 190
           YG +  A   +G     P+ +    ++ VL   GRV   + +L    +    PN +++ +
Sbjct: 124 YGHLDAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTV 183

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            L  +C+ +       V+  M  KG  PN+  + +++N  C+ GR+ +A +LL  + + G
Sbjct: 184 LLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYG 243

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
                 ++T L+ G    +R D    L+ +M++  C PN VT+  LI+ F    M   A 
Sbjct: 244 FQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAI 303

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
             L+ +   G A +    N++I+ + K G  DDA  + + +      PD+ ++ ++L  +
Sbjct: 304 QVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGL 363

Query: 371 CLSGRFSLLPKL-------------------VC-----GLEVEA--------------DL 392
           C + R+    +L                   +C     GL  +A               +
Sbjct: 364 CRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGV 423

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           V YNAL++ FC  G  + A++L+ +M  K   P+  ++  LL GLC A ++D A  +   
Sbjct: 424 VTYNALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAERLDGAAELVAE 480

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           ++  +   N      +V    + G   +AI+L  + +      ++++Y   + G+ +   
Sbjct: 481 MLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCS 540

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
           +E+A  L   +    V P+  T+  ++    KE  I+   +L   V D  +        +
Sbjct: 541 SEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNK 600

Query: 573 LTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
           +   + K     +A++    M + G +P+E
Sbjct: 601 ILLGLCKRCEIDNAIDFFAYMVSNGCMPNE 630



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 75/327 (22%), Positives = 141/327 (43%), Gaps = 22/327 (6%)

Query: 90  ISVVTRLTG-----RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDE 144
           IS  T L G     R++  + ++ E+ R  C     TF  F+ I  +  +    +   ++
Sbjct: 354 ISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQ 413

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-PNFLSFNIALCNLCKLNDVSN 203
           M   G T      N +++     G +D  +++ +     PN +++   L  LC    +  
Sbjct: 414 MSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTITYTTLLTGLCNAERLDG 473

Query: 204 VKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLID 263
             +++  M+R    PNV  F +L++ FC+ G + EA +L+  M+  G + ++  +  L+D
Sbjct: 474 AAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLD 533

Query: 264 GFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP 323
           G  +    + A  L   +V  G SP+V+T++S+I    +      A     +++  G  P
Sbjct: 534 GITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRP 593

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV 383
             V +N ++  L K    D+A+D +  ++    +P+  T+  L+                
Sbjct: 594 KAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIE--------------- 638

Query: 384 CGLEVEADLVVYNALLSYFCKAGFPNQ 410
            GL  E  L     LLS  C  G  N+
Sbjct: 639 -GLAHEGLLKEAQDLLSVLCSRGVLNK 664


>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
 gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
          Length = 641

 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 122/489 (24%), Positives = 227/489 (46%), Gaps = 17/489 (3%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMG-RFGFTPNTFA 156
           G F+++  ++  +     V+  + F++  + Y +  +    +  FD M   F       +
Sbjct: 74  GDFKSLEKVLDRMRCEKRVVVEKCFVVIFKAYGKAHLPEKAVGLFDRMAYEFECKRTVKS 133

Query: 157 RNIVMDVLFKIG---------RVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDV 207
            N V++V+ + G            +G K +  +  PN L+FN+ +  +CK+  V +   +
Sbjct: 134 FNSVLNVIIQEGLFYRALEFYNHVIGAKGVNIS--PNVLTFNLVIKTMCKVGLVDDAVQM 191

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
              M      P+V  +  L++  CK  RI EA  LL  M   G   S   + VLI+G  +
Sbjct: 192 FRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCK 251

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
              L     L + M   GC+PN VTY +LI G         A S LD + S    P++V 
Sbjct: 252 KGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVT 311

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL- 386
           +  +I+ L K G   D   V   + E     + Y + +L+S +   G+     +L   + 
Sbjct: 312 YGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMT 371

Query: 387 --EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
             E E + +VY+A++   C+ G P++A+++ + M +    P+ Y++  L++G   A    
Sbjct: 372 VKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGH 431

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
           +AI +++ +  +N   N   ++ ++  L + G+  +A+ ++ + + +    DVV+Y   I
Sbjct: 432 KAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMI 491

Query: 505 RGLLEGGRTEEAYILYSQM--KHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
            GL   G  E+A  LY++M  +     P+  TY ++L + CK+ +I     LL  ++D  
Sbjct: 492 NGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRG 551

Query: 563 IELDYHTSI 571
            + D  T I
Sbjct: 552 CDPDLVTCI 560



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 158/348 (45%), Gaps = 9/348 (2%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           R +    ++ E+   GC     TF + +    +      V +  D M   G  PN    N
Sbjct: 219 RIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYN 278

Query: 159 IVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
            ++  L   G+++  I +L        +PN +++   +  L K     +   V+ +M  +
Sbjct: 279 TLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEER 338

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           G++ N  ++  L++   K G+  EA QL   M      L+   ++ +IDG  R  + D A
Sbjct: 339 GYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEA 398

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             +  +M  N C PN  TY+SL+KGF EA     A      +       + V ++VLI  
Sbjct: 399 LEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHG 458

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG----RFSLLPKLVCG-LEVE 389
           L K G   +A+ V+  +L     PD   + S+++ +  +G       L  +++C   + +
Sbjct: 459 LCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQ 518

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
            D+V YN LL+  CK    ++A+ L N+MLD+G  PD  + +  LR L
Sbjct: 519 PDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTL 566



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/367 (23%), Positives = 173/367 (47%), Gaps = 42/367 (11%)

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           F  L++ +  +G      ++L  M      +    + V+   + +    + A  L+++M 
Sbjct: 63  FYSLIDNYANLGDFKSLEKVLDRMRCEKRVVVEKCFVVIFKAYGKAHLPEKAVGLFDRMA 122

Query: 283 -QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD-MLESEGH--APDLVFHNVLIDCLSKM 338
            +  C   V ++ S++   ++  +F  A  F + ++ ++G   +P+++  N++I  + K+
Sbjct: 123 YEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFNLVIKTMCKV 182

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVY 395
           G  DDA+ ++  +   K  PD YT+C+L+  +C + R      L+  ++++      V +
Sbjct: 183 GLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTF 242

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN------- 448
           N L++  CK G   +  KL + M  KG  P+  ++  L+ GLC   K+++AI+       
Sbjct: 243 NVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVS 302

Query: 449 ------------VYQGIVMNNPA----------------VNAHVHTAIVDRLIEAGRCHK 480
                       +  G+V    A                VN +V++A++  L + G+  +
Sbjct: 303 SKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQE 362

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
           A+QLF+   V++  L+ + Y+  I GL   G+ +EA  + S+M +    PNAYTY  ++ 
Sbjct: 363 AMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMK 422

Query: 541 SFCKERN 547
            F +  N
Sbjct: 423 GFFEAGN 429


>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 113/456 (24%), Positives = 197/456 (43%), Gaps = 28/456 (6%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV--- 170
           GC      F   +  Y + + +    +   +M +    P     NI++  +   G +   
Sbjct: 373 GCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGP 432

Query: 171 ---DLGIKVLKE-----TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
              +L  K   E     T L      + A C LC          VI  M+  GF P+   
Sbjct: 433 VTFELAEKAYNEMLSAGTVLNKVNVVSFARC-LCGFGKFEKAYKVIHEMMGNGFVPDTST 491

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           +  ++   C   R+  A+ L   M   G    V  +T+LID F +   +  A    ++MV
Sbjct: 492 YSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMV 551

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
           ++GC P VVTYT+LI  +++AK  S+A    +++ ++G  P+++ +  LID   K G+ +
Sbjct: 552 RDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIE 611

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYF 402
            A  +Y  +     +PD   +  + + V                  + ++V Y AL+   
Sbjct: 612 KACQIYARMRGDADIPDVDMYFKIKNNVA----------------EKPNVVTYGALVDGL 655

Query: 403 CKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNA 462
           CKA     A  L  TM   G  P+   +  L+ G C A K+DEA  V+  +V +    N 
Sbjct: 656 CKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNV 715

Query: 463 HVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQ 522
           + +++++DRL +  R    +++  + +      ++V YT  I GL +  +T+EAY L   
Sbjct: 716 YTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLM 775

Query: 523 MKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           M+     PN  TY  M+  F K   +     L +++
Sbjct: 776 MEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREM 811



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 119/546 (21%), Positives = 224/546 (41%), Gaps = 49/546 (8%)

Query: 48  LAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETV---- 103
           L P +V   L    S  + + FF+W  +Q  Y H    +  ++ V  R  G ++ V    
Sbjct: 136 LNPDLVVEILSFLKSPELCVKFFLWAGRQIGYDHTPAVYIALLDVFER--GSYDRVPEEF 193

Query: 104 -RGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMD 162
            R I G+   V      +   + +R   R  ++ + LE    +  FG+ P     N ++ 
Sbjct: 194 LREIRGDDKEV----LGKLLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQ 249

Query: 163 VLFKIGRVDLGIKVLKETQ-----LPNFL--SFNIALCNLCKLNDVSNVKDVIGMMVRKG 215
           V  +  ++D    V +E       +  F    F  ALC + K       ++ + ++ ++ 
Sbjct: 250 VFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKW------REALSLIEKED 303

Query: 216 FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAG 275
           F PN  ++  +++  C+     EA   L  M +     +V  + +L+ G    ++L    
Sbjct: 304 FVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCK 363

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
            +   M+  GC P+   + SL+  + ++  FS A+  L  +E     P  V +N+LI  +
Sbjct: 364 RILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSI 423

Query: 336 SKMG------SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV---CGL 386
              G      +++ A   Y+ +L    V +     S    +C  G+F    K++    G 
Sbjct: 424 CSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGN 483

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
               D   Y+ ++ + C A     A  L+  M   G  PD Y++  L+     A  I +A
Sbjct: 484 GFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQA 543

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
            N    +V +        +T ++   ++A +   A +LF   I +    +V++YT  I G
Sbjct: 544 HNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDG 603

Query: 507 LLEGGRTEEAYILYSQMK----------------HIAVPPNAYTYRVMLLSFCKERNIKM 550
             + G  E+A  +Y++M+                ++A  PN  TY  ++   CK   +K 
Sbjct: 604 YCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKD 663

Query: 551 VKRLLQ 556
            + LL+
Sbjct: 664 ARDLLE 669



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 103/485 (21%), Positives = 216/485 (44%), Gaps = 33/485 (6%)

Query: 60  CPSDLIALSFFIWCA-KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIK 118
           C +  +  +FF++   K      DV ++  +I   ++  G  +     + E+ R GC   
Sbjct: 500 CNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSK-AGIIKQAHNWLDEMVRDGCEPT 558

Query: 119 AQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK 178
             T+   +  Y + +   +  E F+ M   G  PN      ++D   K G ++   ++  
Sbjct: 559 VVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYA 618

Query: 179 E--------------------TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYP 218
                                 + PN +++   +  LCK + V + +D++  M   G  P
Sbjct: 619 RMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEP 678

Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
           N  +++ L++ FCK  ++ EA ++   M+  G + +V  ++ LID   + +RLD+   + 
Sbjct: 679 NTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVL 738

Query: 279 EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
            KM++N C+PN+V YT +I G  +      A+  + M+E +G  P++V +  +ID   K 
Sbjct: 739 SKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKA 798

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNAL 398
           G  D  L+++  +      P+  T+  L++  C +G       L+     E     +   
Sbjct: 799 GKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALL----EEMKQTYWPKH 854

Query: 399 LSYFCKA--GFPNQ---AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
           +S +CK   G+  +   ++ L   +   G  P    +  L+     A +++ A+ +++ +
Sbjct: 855 VSSYCKVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEV 914

Query: 454 VMNNPAVNA--HVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
           +  + ++ A  +++T+++     A +   A +LF   I +    D+ ++   + GL+   
Sbjct: 915 ISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVR 974

Query: 512 RTEEA 516
           R EEA
Sbjct: 975 RWEEA 979



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 125/515 (24%), Positives = 195/515 (37%), Gaps = 93/515 (18%)

Query: 134 MYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALC 193
           +Y  +L+ F E G +   P  F R I  D    +G++   + VL      N L +N+AL 
Sbjct: 173 VYIALLDVF-ERGSYDRVPEEFLREIRGDDKEVLGKL---LNVLIRKCCRNGL-WNVALE 227

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
            L +L D              G+ P    +  L+  F +  ++  A  +   M  LG S+
Sbjct: 228 ELGRLKDF-------------GYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSM 274

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
                        ++ +   A  L EK       PN + Y  +I G  EA  F  A  FL
Sbjct: 275 DEFTLGFFAQALCKVGKWREALSLIEK---EDFVPNTILYNKMISGLCEASFFEEAMDFL 331

Query: 314 DMLESEGHAPDLVFHNVLI-DCLSK--MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
           + + S    P++  + +L+  CL+K  +G     L +   ++     P    F SL+   
Sbjct: 332 NRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSM---MIAEGCYPSYTIFNSLVHAY 388

Query: 371 CLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAG-FPNQ-----AVKLYNTMLDK 421
           C S  FS   KL+  +E    +   VVYN L+   C  G  P       A K YN ML  
Sbjct: 389 CKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSA 448

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
           G   +  + V   R LCG  K ++A  V   ++ N                         
Sbjct: 449 GTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNG------------------------ 484

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
                      +  D  +Y+  I  L    R E A+ L+ +MK   V P+ YTY +++  
Sbjct: 485 -----------FVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDC 533

Query: 542 FCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSS--SAVNQLVE-MCNLGL 598
           F K   IK     L +++    E    T +  T  I  +  +   S  N+L E M   G 
Sbjct: 534 FSKAGIIKQAHNWLDEMVRDGCE---PTVVTYTTLIHAYLKAKKVSVANELFELMIAKGC 590

Query: 599 IPDEMWRKLGLLSDETMTPVSLFDGFVPCERRAGN 633
            P+             +T  +L DG+     ++GN
Sbjct: 591 FPN------------VITYTALIDGYC----KSGN 609



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/294 (23%), Positives = 115/294 (39%), Gaps = 80/294 (27%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE-------------TQL---- 182
           E F +M   G+ PN +  + ++D LFK  R+DL +KVL +             T++    
Sbjct: 701 EVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGL 760

Query: 183 ----------------------PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV 220
                                 PN +++   +    K   V    ++   M  KG  PN 
Sbjct: 761 SKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNF 820

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
             + +L+N  C  G + EAY LL  M        V+++  +I+G++R   L +   L E+
Sbjct: 821 VTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLG--LLEE 878

Query: 281 MVQNGCSPNVVTY-------------------------------------TSLIKGFMEA 303
           + +NG +P ++ Y                                     TSLI  F  A
Sbjct: 879 VEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSLIYSFSYA 938

Query: 304 KMFSIAFS-FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
                AF  F DM+  +G  PDL     L+  L ++  +++AL + D L ++ +
Sbjct: 939 SKIGHAFELFYDMIR-DGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSLCQMDI 991


>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g74580
 gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
 gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 128/534 (23%), Positives = 236/534 (44%), Gaps = 9/534 (1%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           + R    DV SF   +    + T R      ++  ++  GC +    +   +  ++    
Sbjct: 138 RDRGITPDVYSFTIRMKSFCK-TSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENF 196

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNI 190
                E F +M   G +      N ++ VL K G V     L  KV+K   LPN  ++N+
Sbjct: 197 KAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNL 256

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +  LC+  ++     ++G ++ +G  P+V  +  L+   CK  +  EA   LG M+  G
Sbjct: 257 FIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEG 316

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
                  +  LI G+ +   + +A  +    V NG  P+  TY SLI G       + A 
Sbjct: 317 LEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRAL 376

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
           +  +    +G  P+++ +N LI  LS  G   +A  + + + E  L+P+  TF  L++ +
Sbjct: 377 ALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGL 436

Query: 371 CLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           C  G  S    L K++       D+  +N L+  +        A+++ + MLD G  PD 
Sbjct: 437 CKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDV 496

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
           Y++  LL GLC   K ++ +  Y+ +V    A N      +++ L    +  +A+ L   
Sbjct: 497 YTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEE 556

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI-AVPPNAYTYRVMLLSFCKER 546
              +    D V++   I G  + G  + AY L+ +M+    V  +  TY +++ +F ++ 
Sbjct: 557 MKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKL 616

Query: 547 NIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           N+ M ++L Q+++D  +  D +T   +     K  + +     L+EM   G IP
Sbjct: 617 NVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIP 670



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 137/569 (24%), Positives = 245/569 (43%), Gaps = 18/569 (3%)

Query: 45  PIILAPHIVHSTLLNCPSD-LIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLT--GRFE 101
           P +L  H+  + ++ C  D + AL  F    K+  + H + ++    SV+ +L   G+FE
Sbjct: 3   PPLLPKHV--TAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYR---SVIEKLGYYGKFE 57

Query: 102 TVRGIVGEL-ARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIV 160
            +  ++ ++   VG  +    ++  ++ Y R       +  F+ M  +   P  F+ N +
Sbjct: 58  AMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAI 117

Query: 161 MDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
           M VL   G  D   KV    +     P+  SF I + + CK +       ++  M  +G 
Sbjct: 118 MSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGC 177

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
             NV  +  ++  F +    AE Y+L G M+  G SL ++ +  L+    +   +     
Sbjct: 178 EMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEK 237

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           L +K+++ G  PN+ TY   I+G  +      A   +  L  +G  PD++ +N LI  L 
Sbjct: 238 LLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLC 297

Query: 337 KMGSYDDALDVYDG-LLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DL 392
           K   + +A +VY G ++   L PDSYT+ +L++  C  G   L  ++V          D 
Sbjct: 298 KNSKFQEA-EVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQ 356

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
             Y +L+   C  G  N+A+ L+N  L KG  P+   +  L++GL     I EA  +   
Sbjct: 357 FTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANE 416

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           +              +V+ L + G    A  L +  I + Y  D+ ++ + I G     +
Sbjct: 417 MSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLK 476

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
            E A  +   M    V P+ YTY  +L   CK    + V    + +++     +  T   
Sbjct: 477 MENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNI 536

Query: 573 LTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           L + + ++     A+  L EM N  + PD
Sbjct: 537 LLESLCRYRKLDEALGLLEEMKNKSVNPD 565



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/382 (23%), Positives = 175/382 (45%), Gaps = 9/382 (2%)

Query: 71  IWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYW 130
           + C  ++    DV +++++I  + +   +F+     +G++   G    + T+   +  Y 
Sbjct: 274 VGCLIEQGPKPDVITYNNLIYGLCK-NSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYC 332

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFL 186
           +G M  +      +    GF P+ F    ++D L   G  +  + +  E       PN +
Sbjct: 333 KGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVI 392

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
            +N  +  L     +     +   M  KG  P V+ F IL+N  CKMG +++A  L+ +M
Sbjct: 393 LYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVM 452

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
           I+ G    +  + +LI G+    +++ A  + + M+ NG  P+V TY SL+ G  +   F
Sbjct: 453 ISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKF 512

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
                    +  +G AP+L   N+L++ L +    D+AL + + +    + PD+ TF +L
Sbjct: 513 EDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTL 572

Query: 367 LSTVC----LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
           +   C    L G ++L  K+    +V +    YN ++  F +      A KL+  M+D+ 
Sbjct: 573 IDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRC 632

Query: 423 FTPDNYSFVGLLRGLCGARKID 444
             PD Y++  ++ G C    ++
Sbjct: 633 LGPDGYTYRLMVDGFCKTGNVN 654



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/314 (23%), Positives = 137/314 (43%), Gaps = 13/314 (4%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
           ++    +VQ+F+ +++ + ++ G      G+V  +   G      TF + +  Y      
Sbjct: 419 EKGLIPEVQTFNILVNGLCKM-GCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKM 477

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIA 191
              LE  D M   G  P+ +  N +++ L K  + +  ++  K    +   PN  +FNI 
Sbjct: 478 ENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNIL 537

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI-TLG 250
           L +LC+   +     ++  M  K   P+   F  L++ FCK G +  AY L   M     
Sbjct: 538 LESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYK 597

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
            S S   + ++I  F     + MA  L+++MV     P+  TY  ++ GF +    ++ +
Sbjct: 598 VSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGY 657

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
            FL  +   G  P L     +I+CL       +A  +   +++  LVP++      ++T+
Sbjct: 658 KFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA------VNTI 711

Query: 371 C-LSGRFSLLPKLV 383
           C +  +    PKLV
Sbjct: 712 CDVDKKEVAAPKLV 725



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 109/249 (43%), Gaps = 9/249 (3%)

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
           + E  +  YNA++S    +G+ +QA K+Y  M D+G TPD YSF   ++  C   +   A
Sbjct: 106 DCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAA 165

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
           + +   +      +N   +  +V    E     +  +LF + +     L + ++   +R 
Sbjct: 166 LRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRV 225

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           L + G  +E   L  ++    V PN +TY + +   C+   +    R++  +I+   + D
Sbjct: 226 LCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPD 285

Query: 567 YHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM--------WRKLGLLS-DETMTP 617
             T   L   + K      A   L +M N GL PD          + K G++   E +  
Sbjct: 286 VITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVG 345

Query: 618 VSLFDGFVP 626
            ++F+GFVP
Sbjct: 346 DAVFNGFVP 354


>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 707

 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 96/377 (25%), Positives = 184/377 (48%), Gaps = 5/377 (1%)

Query: 184 NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
           N  ++NI L  LC+  +      ++  M +    P+V  +  ++  FC+   + +A QL 
Sbjct: 141 NVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLA 200

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
             M   G S S+  W +LID F +  ++D A  L ++M   G   +++ YTSLI+GF + 
Sbjct: 201 NEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDC 260

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
                  +  D +   G +P  + +N LI    K+G   +A ++++ ++E  + P+ YT+
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTY 320

Query: 364 CSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
             L+  +C  G+      L  L+   + E ++V YN +++  CK      A+++   M  
Sbjct: 321 TGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKK 380

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV--HTAIVDRLIEAGRC 478
           +   PDN ++  LL GLC    +DEA  +   ++ ++   +  V    A++  L +  R 
Sbjct: 381 RRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRL 440

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
           H+A+ ++   + +    D+V+  + +   L+ G   +A  L+ Q+ +  + PN+ TY  M
Sbjct: 441 HQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTM 500

Query: 539 LLSFCKERNIKMVKRLL 555
           +  FCK   + + K LL
Sbjct: 501 IDGFCKTGMLNVAKGLL 517



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 133/513 (25%), Positives = 234/513 (45%), Gaps = 44/513 (8%)

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLND 200
           M + GF  N +  NI++  L +       + +L+E +    +P+ +S+N  +   C+  +
Sbjct: 133 MLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKE 192

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
           +     +   M   G   ++  + IL++ FCK G++ EA  LL  M   G    +  +T 
Sbjct: 193 LEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTS 252

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           LI GF     LD    L++++++ G SP  +TY +LI+GF +      A    + +   G
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERG 312

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC---LSGRFS 377
             P++  +  LID L  +G   +AL + + +L+    P+  T+  +++ +C   L     
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADAL 372

Query: 378 LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTML-DKGFT-PDNYSFVGLLR 435
            + +L+       D + YN+LL   C  G  ++A KL   ML D  +T PD  SF  L+ 
Sbjct: 373 EIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIH 432

Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
           GLC   ++ +A+++Y  +V    A +      +++  +++G  +KA++L+++    K   
Sbjct: 433 GLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVP 492

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
           +  +YT  I G  + G    A  L  +M+   +PP+ + Y  +L S CK+  +    RL 
Sbjct: 493 NSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLF 552

Query: 556 Q---------DVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD----- 601
           +         DVI   I +D            K     SA + LV M + GL PD     
Sbjct: 553 EEMQRDDSFPDVISFNIMIDGS---------LKAGDIKSAESLLVGMSHAGLSPDLFTYS 603

Query: 602 ---EMWRKLGLLSDETMTPVSLFD-----GFVP 626
                + KLG L +     +S FD     GF P
Sbjct: 604 KLINRFLKLGYLDE----AISFFDKMIDSGFEP 632



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 127/590 (21%), Positives = 248/590 (42%), Gaps = 54/590 (9%)

Query: 49  APHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMIS--VVTRLTGRFETVRGI 106
           A + + +TL+   +  +A SF+     + D F +  S   ++   V  R TG      G+
Sbjct: 74  AGNNLMATLVRSRNHEVAFSFYRKML-ETDTFINFVSLSGLLECFVQMRKTG---FAHGV 129

Query: 107 VGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK 166
           +  + + G       + + L+   R   +G  +    EM +    P+  + N V+    +
Sbjct: 130 LALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCE 189

Query: 167 IGRVDLGIKVLKETQLP----NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
              ++  +++  E Q      + +++ I +   CK   +     ++  M  KG   ++ +
Sbjct: 190 GKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIV 249

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           +  L+  FC  G +     L   ++  G S     +  LI GF +L RL  A  ++E M+
Sbjct: 250 YTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMM 309

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
           + G  PNV TYT LI G         A   L+++  +   P++V +N++I+ L K     
Sbjct: 310 ERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVA 369

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL-----EVEADLVVYNA 397
           DAL++ + + + +  PD+ T+ SLL  +C  G      KL+  +       + D++ +NA
Sbjct: 370 DALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNA 429

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
           L+   CK    +QA+ +Y+ +++K    D  +   LL     +  +++A+ +++ I  + 
Sbjct: 430 LIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSK 489

Query: 458 PAVNAHVHTAIVD-----------------------------------RLIEAGRCHKAI 482
              N+  +T ++D                                    L + G   +A 
Sbjct: 490 IVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAW 549

Query: 483 QLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
           +LF     +    DV+S+ + I G L+ G  + A  L   M H  + P+ +TY  ++  F
Sbjct: 550 RLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRF 609

Query: 543 CKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVE 592
            K   +         +ID+  E D H    +   + K+  S    ++L E
Sbjct: 610 LKLGYLDEAISFFDKMIDSGFEPDAH----ICDSVLKYCISQGETDKLTE 655



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 112/482 (23%), Positives = 215/482 (44%), Gaps = 15/482 (3%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWR-GEM-YGMVLEAFDEMGRFGFTPNT 154
            G+ +   G++ E+   G       +   +R +   GE+  G  L  FDE+   G +P  
Sbjct: 225 AGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKAL--FDEVLERGDSPCA 282

Query: 155 FARNIVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGM 210
              N ++    K+GR+    ++    ++    PN  ++   +  LC +        ++ +
Sbjct: 283 ITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNL 342

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M++K   PNV  + I++N  CK   +A+A +++ LM    T      +  L+ G      
Sbjct: 343 MLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGD 402

Query: 271 LDMAGYLWEKMVQNGC--SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH 328
           LD A  L   M+++     P+V+++ +LI G  +      A    D+L  +  A D+V  
Sbjct: 403 LDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTT 462

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL-- 386
           N+L++   K G  + A++++  +   K+VP+S T+ +++   C +G  ++   L+C +  
Sbjct: 463 NILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRL 522

Query: 387 -EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
            E+   +  YN LLS  CK G  +QA +L+  M      PD  SF  ++ G   A  I  
Sbjct: 523 SELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKS 582

Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
           A ++  G+     + +   ++ +++R ++ G   +AI  F + I   +  D       ++
Sbjct: 583 AESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLK 642

Query: 506 GLLEGGRTEEAYILYSQM-KHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
             +  G T++      ++     V     T  VM        N+ + KRLL+ V D + E
Sbjct: 643 YCISQGETDKLTEFVKKLVDKDVVLDKELTCTVMDYMCSSSGNMDIAKRLLR-VADDKEE 701

Query: 565 LD 566
            D
Sbjct: 702 GD 703


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 129/460 (28%), Positives = 210/460 (45%), Gaps = 46/460 (10%)

Query: 151 TPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKD 206
            PN F  NI++D L K G +     +L   +     P+ +++N  +    K  ++  V+ 
Sbjct: 191 APNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEK 250

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
           ++G M   G  P+V  +  L+NCFCK GR+  AY     M   G   +V  ++  +D F 
Sbjct: 251 LVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFC 310

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
           +   +  A  L+ +M   G  PN VTYT L+ G  +A     A    + +  +G   ++V
Sbjct: 311 KNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVV 370

Query: 327 FHNVLIDCLSKMGSYDDALDVY----------DGLLELKLVPDSYTF------CSLLST- 369
            + VL+D L K G   +A DV+          + LL   L+   + +       SLLS  
Sbjct: 371 TYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEM 430

Query: 370 --------VCLSGRF--------------SLLPKL-VCGLEVEADLVVYNALLSYFCKAG 406
                   V L G                SLL K+  CGL+   + V+Y  ++    KA 
Sbjct: 431 KDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLK--PNNVIYTNIMDACFKAR 488

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
             ++A+ L   M+D GF P+  ++  L+ GLC A  IDEAI+ +  +V      N   +T
Sbjct: 489 KESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYT 548

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
           A+VD L + GR  KA+ L    I +   LD V  T  + G L+ G  ++A+ L ++M + 
Sbjct: 549 ALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINS 608

Query: 527 AVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
            +  + Y Y   +  FC    I+  + +L ++I+  I  D
Sbjct: 609 GLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPD 648



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/453 (24%), Positives = 210/453 (46%), Gaps = 3/453 (0%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
           PNT   N ++  L +    +L  ++ ++   PN  +FNI +  LCK  D++  + ++  M
Sbjct: 161 PNTRTCNHILLCLARERSSELAWRLFEQLPAPNVFTFNIMIDFLCKEGDLAEARALLARM 220

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
              G  P+V  +  L++ + K G + E  +L+G M   G    V  +  L++ F +  R+
Sbjct: 221 KAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRM 280

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           + A   + +M + G   NVVT+++ +  F +  M   A      +  +G  P+ V +  L
Sbjct: 281 ERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCL 340

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---V 388
           +D   K G  DDAL + + +++  +  +  T+  L+  +C  G+ +    +   +E   +
Sbjct: 341 VDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGI 400

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
            A+ ++Y  L+          +A+ L + M DKG   D   +  L+ GLC  +K+DEA +
Sbjct: 401 RANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKS 460

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           +   +       N  ++T I+D   +A +  +AI L ++ +   +  ++V+Y   + GL 
Sbjct: 461 LLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLC 520

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
           + G  +EA   +++M  + + PN   Y  ++   CK   +     LL ++ID  + LD  
Sbjct: 521 KAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNV 580

Query: 569 TSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
               L     K  +   A     +M N GL  D
Sbjct: 581 VCTSLMDGHLKQGNLQDAFALKAKMINSGLQLD 613



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 113/467 (24%), Positives = 214/467 (45%), Gaps = 12/467 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           +V +F+ MI  + +  G     R ++  +  +GC     T+   +  Y +      V + 
Sbjct: 193 NVFTFNIMIDFLCK-EGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKL 251

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG----IKVLKETQLPNFLSFNIALCNLCK 197
             EM   G  P+    N +++   K GR++       ++ +E  + N ++F+  +   CK
Sbjct: 252 VGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCK 311

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              V     +   M  KG  PN   +  L++  CK GR+ +A  L   M+  G  L+V  
Sbjct: 312 NGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVT 371

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +TVL+DG  +  ++  A  ++  M + G   N + YT+LI G    K    A S L  ++
Sbjct: 372 YTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMK 431

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-- 375
            +G   D+  +  LI  L  +   D+A  + + + E  L P++  + +++   C   R  
Sbjct: 432 DKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDA-CFKARKE 490

Query: 376 ---FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
               +LL K++       ++V Y AL+   CKAG  ++A+  +N M+D G  P+  ++  
Sbjct: 491 SEAIALLQKMM-DSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTA 549

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           L+ GLC   ++D+A+ +   ++    +++  V T+++D  ++ G    A  L  + I   
Sbjct: 550 LVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSG 609

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
             LD+  YT  + G       +EA  + S+M    + P+A  Y  ++
Sbjct: 610 LQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLI 656



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 111/429 (25%), Positives = 194/429 (45%), Gaps = 14/429 (3%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV +++ +++   +  GR E       E+ R G +    TF  F+  + +  M    ++ 
Sbjct: 263 DVVTYNALVNCFCKF-GRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKL 321

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE---TQLP-NFLSFNIALCNLCK 197
           F +M   G  PN      ++D   K GR+D  + +  E     +P N +++ + +  LCK
Sbjct: 322 FAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCK 381

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              V+  +DV  +M R G   N  ++  L++          A  LL  M   G  L V+ 
Sbjct: 382 EGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSL 441

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  LI G   L++LD A  L  KM + G  PN V YT+++    +A+  S A + L  + 
Sbjct: 442 YGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMM 501

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G  P++V +  L+D L K GS D+A+  ++ +++L L P+   + +L+  +C +GR  
Sbjct: 502 DSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLD 561

Query: 378 ---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
              LL   +    +  D VV  +L+    K G    A  L   M++ G   D Y +   +
Sbjct: 562 KAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFV 621

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            G C    I EA  V   ++ N    +A V+  +++      +C K   +   AI++   
Sbjct: 622 WGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLIN------KCQKLGNMEEAAILQNEM 675

Query: 495 LDVVSYTVA 503
             ++S T A
Sbjct: 676 ESLLSCTNA 684



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 81/359 (22%), Positives = 147/359 (40%), Gaps = 63/359 (17%)

Query: 303 AKMFSIAFSFLDMLESEGHAPDL------VFH-----------------NVLIDCLSKMG 339
           A++F  + S L  L + GH P L      + H                 + L+  L+  G
Sbjct: 83  ARLFPHSRSLLSRLLAPGHHPHLAASLVDLLHRAALALGPRRSALPSVVDTLLSLLADRG 142

Query: 340 SYDDALDVYDGLLELKLVPDS-------------------------------YTFCSLLS 368
             DDA+     + EL++ P++                               +TF  ++ 
Sbjct: 143 LLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQLPAPNVFTFNIMID 202

Query: 369 TVCLSGRFSLLPKLVCGLEV---EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
            +C  G  +    L+  ++      D+V YN+L+  + K G   +  KL   M   G  P
Sbjct: 203 FLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRP 262

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           D  ++  L+   C   +++ A + +  +       N    +  VD   + G   +A++LF
Sbjct: 263 DVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLF 322

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
            +  ++    + V+YT  + G  + GR ++A +L ++M    VP N  TY V++   CKE
Sbjct: 323 AQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKE 382

Query: 546 RNIKMVK---RLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
             +   +   RL++       EL Y T I    F++K  +S  A++ L EM + G+  D
Sbjct: 383 GKVAEAEDVFRLMERAGIRANELLYTTLIH-GHFVYK--NSERALSLLSEMKDKGMELD 438



 Score = 39.3 bits (90), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 72/170 (42%), Gaps = 26/170 (15%)

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAY 517
           P  + H+  ++VD L  A     A+ L  R       +D +   +A RGLL+     +A 
Sbjct: 99  PGHHPHLAASLVDLLHRA-----ALALGPRRSALPSVVDTLLSLLADRGLLD-----DAV 148

Query: 518 ILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFI 577
           +  ++++ + VPPN  T   +LL   +ER+ ++  RL + +    +     T   +  F+
Sbjct: 149 LALARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQLPAPNV----FTFNIMIDFL 204

Query: 578 FKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTPVSLFDGFVPC 627
            K    + A   L  M  +G  PD             +T  SL DG+  C
Sbjct: 205 CKEGDLAEARALLARMKAIGCSPD------------VVTYNSLIDGYGKC 242


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 125/509 (24%), Positives = 227/509 (44%), Gaps = 46/509 (9%)

Query: 80  FHDVQSFDH----------MISVVTRLTG-----RFETVRGIVGELARVGCVIKAQTFLL 124
           F++  SF H          +++  T L+G     +F   + I+  +   GC      F  
Sbjct: 287 FNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNS 346

Query: 125 FLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVM------DVLFKIGRVDLGIKVLK 178
            +  Y     Y    + F+ M   G  P   A NI +      + L     +DL  KV +
Sbjct: 347 LVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYE 406

Query: 179 E-----TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKM 233
           E       L    + N + C LC +        ++  M+RKGF P+   +  ++   C+ 
Sbjct: 407 EMLAASCVLNKVNTANFSRC-LCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQA 465

Query: 234 GRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTY 293
            ++ +++ L   M   G +  V  +T+LID F +   ++ A   +++M   GCSPNVVTY
Sbjct: 466 KKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTY 525

Query: 294 TSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL- 352
           T+L+  ++++K    A      +      P+ V ++ LID L K G    A +VY+ L+ 
Sbjct: 526 TALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIG 585

Query: 353 ---------------ELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVV 394
                             + P+  T+ +L+  +C + + S   +L+  +     E + +V
Sbjct: 586 TSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIV 645

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           Y+AL+  FCK G  + A +++  M   G+ P  +++  L+  +    ++D A+ V   ++
Sbjct: 646 YDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEML 705

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
            ++   N   +TA++D L + G   KA+ L      +    +VV+YT  I GL + G+ +
Sbjct: 706 NDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKAD 765

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
            +  L+ QM      PN  TYRV++   C
Sbjct: 766 ASLKLFKQMNSKGCAPNYVTYRVLINHCC 794



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 114/496 (22%), Positives = 214/496 (43%), Gaps = 59/496 (11%)

Query: 60  CPSDLIALSFFIWCAKQRDYFH-DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIK 118
           C +  +  SF ++   +R   + DV ++  +I    +  G  E  R    E+  VGC   
Sbjct: 463 CQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCK-AGLIEQARSWFDEMRSVGCSPN 521

Query: 119 AQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK 178
             T+   L  Y + +      + F  M      PN    + ++D L K G +    +V +
Sbjct: 522 VVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYE 581

Query: 179 E--------------------TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYP 218
           +                    T  PN +++   +  LCK   VS+  +++  M+  G  P
Sbjct: 582 KLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEP 641

Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
           N  +++ L++ FCK+G+I  A ++   M   G   SV+ +T LID   +  RLD+A  + 
Sbjct: 642 NQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVL 701

Query: 279 EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
            +M+ + C+PNVVTYT++I G  +      A + L ++E +G +P++V +  LID L K 
Sbjct: 702 SEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKT 761

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNAL 398
           G  D +L ++  +      P                                + V Y  L
Sbjct: 762 GKADASLKLFKQMNSKGCAP--------------------------------NYVTYRVL 789

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           +++ C AG  ++A  L + M    +      +   ++G   ++K   ++ + + +  +  
Sbjct: 790 INHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGF--SKKFIASLGLLEEMESHET 847

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS---YTVAIRGLLEGGRTEE 515
              A V+  ++D   +AGR   A++L +  +     L++ S   Y   I+ L    + EE
Sbjct: 848 VPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEE 907

Query: 516 AYILYSQMKHIAVPPN 531
           A+ LY++M    + P+
Sbjct: 908 AFTLYTEMTRKGIVPD 923



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 132/610 (21%), Positives = 242/610 (39%), Gaps = 80/610 (13%)

Query: 62  SDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQT 121
           S  + + FF+W  +Q  Y H    +D +  ++    G  +  R     L  +G   +   
Sbjct: 113 SPELCVRFFLWAERQVGYSHTGACYDALAEIL----GFEDPARTAERLLREIGEDDREVL 168

Query: 122 FLLFLRIYWRGEMYGMVLEAFDEMGR---FGFTPNTFARNIVMDVLFKIGRVDLGIKVLK 178
             L   +  R   +G+  EA +E+GR   FG+ P+    N ++ VL   G+V++G +V K
Sbjct: 169 RRLLNVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQK 228

Query: 179 ETQLPNFL-------SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFC 231
           E     F         F  ALC       V    D + M+ ++ F  +  +   +++   
Sbjct: 229 EMSASGFCMDRSTIGYFAQALCK------VGRWADALNMLEKEDFNLDTVLCTQMISGLM 282

Query: 232 KMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVV 291
           +     EA   L  M       +V  +  L+ GF + ++      +   M+  GC+PN  
Sbjct: 283 EASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPS 342

Query: 292 TYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID------------------ 333
            + SL+ G+  A  ++ A+   + + + G  P  V +N+ I                   
Sbjct: 343 LFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVE 402

Query: 334 -----------------------CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
                                  CL  +G ++ A  +   ++    VPD+ T+  +++ +
Sbjct: 403 KVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFL 462

Query: 371 CLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           C + +     LL + +    V  D+  Y  L+  FCKAG   QA   ++ M   G +P+ 
Sbjct: 463 CQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNV 522

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
            ++  LL     ++++ +A +++  +V      NA  ++A++D L +AG   KA +++ +
Sbjct: 523 VTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEK 582

Query: 488 AI-----VEK-----------YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
            I     VE               +VV+Y   I GL +  +  +A+ L   M      PN
Sbjct: 583 LIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPN 642

Query: 532 AYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLV 591
              Y  ++  FCK   I   + +   +         HT   L   +FK      A+  L 
Sbjct: 643 QIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLS 702

Query: 592 EMCNLGLIPD 601
           EM N    P+
Sbjct: 703 EMLNDSCNPN 712



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 107/498 (21%), Positives = 212/498 (42%), Gaps = 28/498 (5%)

Query: 115 CVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI 174
           C+    T+   L  + + + +G      + M   G  PN    N ++      G      
Sbjct: 302 CIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAY 361

Query: 175 KVLKETQL----PNFLSFNIALCNLCKLNDVSN------VKDVIGMMVRKGFYPNVRMFE 224
           K+          P ++++NI + ++C   ++ N      V+ V   M+      N     
Sbjct: 362 KLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTA 421

Query: 225 ILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN 284
               C C +G+  +A+Q+L  M+  G     + +T +I    + ++++ +  L+++M + 
Sbjct: 422 NFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRA 481

Query: 285 GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
           G +P+V TYT LI  F +A +   A S+ D + S G +P++V +  L+    K      A
Sbjct: 482 GVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQA 541

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCK 404
            D++  +++    P++ T+ +L+  +C +G            E++    VY  L+     
Sbjct: 542 HDIFHRMVDAACYPNAVTYSALIDGLCKAG------------EIQKACEVYEKLIG---T 586

Query: 405 AGFPNQAVKLYNTMLDK-GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAH 463
           +G  N     Y    D     P+  ++  L+ GLC A+K+ +A  +   ++      N  
Sbjct: 587 SG--NVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQI 644

Query: 464 VHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM 523
           V+ A++D   + G+   A ++F R     Y   V +YT  I  + + GR + A  + S+M
Sbjct: 645 VYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEM 704

Query: 524 KHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSS 583
            + +  PN  TY  M+    K   I+    LL  + +     +  T   L   + K   +
Sbjct: 705 LNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKA 764

Query: 584 SSAVNQLVEMCNLGLIPD 601
            +++    +M + G  P+
Sbjct: 765 DASLKLFKQMNSKGCAPN 782


>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
 gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
 gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 800

 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 121/468 (25%), Positives = 214/468 (45%), Gaps = 14/468 (2%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLN 199
           EM   G   + +  ++VM   FK G  D  +++  E       P+    ++A+ +LCKL 
Sbjct: 167 EMRGKGRPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
           D +    V+  M   GF P    F  +++   K GR+ EA  +   ++  G  +SV   T
Sbjct: 227 DANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLAT 286

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
            L+ G+   R +  A  ++E+ +++G  P  VTYT LI+G  E  M   A+     +   
Sbjct: 287 TLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDH 346

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
           G  P     N++I  L     + DA+ ++  + +   +PD++T+  L+  +C   +    
Sbjct: 347 GLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMAD-SGIPDAFTYNILIHWLCQRRKIREA 405

Query: 380 PKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
             L   +    V+  +V Y++LL  +C  G  ++AVKLY  M  KGFTP+  ++  L++G
Sbjct: 406 LNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKG 465

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
                  D+A  +   +  N  + N + +  +++ L   GR  +  ++ +R   E +   
Sbjct: 466 HINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPT 525

Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
            ++Y   I G ++ G    A+ +Y QM    +PPN  TY   +  +CK     +  ++L 
Sbjct: 526 AMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLN 585

Query: 557 DVIDARIELDYHTSIRLTKFIFKF---HSSSSAVNQLVEMCNLGLIPD 601
           DV    +  D          IF F    + S A+  LV M   GL+P+
Sbjct: 586 DVRCKGLRPDIAA---YNSLIFGFCQEGNMSHALQVLVLMLKDGLLPN 630



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 109/470 (23%), Positives = 204/470 (43%), Gaps = 6/470 (1%)

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           I  E  R G V    T+ + +R      M     E   +M   G  P+T   N+V+  L 
Sbjct: 304 IFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLL 363

Query: 166 KIGRVDLGIKVLKE---TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
                   + + KE   + +P+  ++NI +  LC+   +    ++   M   G  P +  
Sbjct: 364 NDKLWKDAVSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVT 423

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           +  LL C+C  G + EA +L   M   G + +V  +T L+ G       D A  L  +M 
Sbjct: 424 YHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMK 483

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
           QNG S N  TY +LI G             L   E+EG  P  + +N +I+   K G   
Sbjct: 484 QNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMG 543

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALL 399
            A  VY  +    + P+  T+ S +   C +    L  K++  +  +    D+  YN+L+
Sbjct: 544 SAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLI 603

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
             FC+ G  + A+++   ML  G  P+   +   + G    + ++EA+ +Y+ ++     
Sbjct: 604 FGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGID 663

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
           ++   +T ++D   + G    A++L+   + +    D +++T    GL   G  ++A  L
Sbjct: 664 LDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKL 723

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
             +M  + + PN   Y +++  + +   ++   RL  ++++ +I  D  T
Sbjct: 724 LDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTT 773



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 107/500 (21%), Positives = 200/500 (40%), Gaps = 43/500 (8%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNL-----CKL 198
           +M   GF P  F  N V+DVL K GR++  + + K+  L      ++ L        C  
Sbjct: 237 KMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHI-KDELLATGKKMSVVLATTLMHGYCLQ 295

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
            +V    D+    +R G  P    + +L+    + G   +AY+L   M   G   S N +
Sbjct: 296 REVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEF 355

Query: 259 TVLIDG-------------FRRL---------------------RRLDMAGYLWEKMVQN 284
            ++I G             F+ +                     R++  A  LWEKM + 
Sbjct: 356 NMVIKGLLNDKLWKDAVSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNET 415

Query: 285 GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
           G  P +VTY SL+  +        A      +  +G  P++V +  L+       ++D A
Sbjct: 416 GVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKA 475

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSY 401
             +   + +  +  + YT+ +L++ +C+ GR   + +++   E E      + YN++++ 
Sbjct: 476 YALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIING 535

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVN 461
           F KAG    A  +Y  M  KG  P+  ++   + G C     D A+ +   +       +
Sbjct: 536 FIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPD 595

Query: 462 AHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYS 521
              + +++    + G    A+Q+    + +    ++  Y   I G       EEA  LY 
Sbjct: 596 IAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYE 655

Query: 522 QMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFH 581
           +M    +  +  TY  ++  F K+ N+    +L  +++      D+ T   LT  + +  
Sbjct: 656 KMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNG 715

Query: 582 SSSSAVNQLVEMCNLGLIPD 601
               A   L EM  L + P+
Sbjct: 716 DIDDARKLLDEMNRLDIRPN 735



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 125/272 (45%), Gaps = 4/272 (1%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           + GR   V  ++      G V  A T+   +  + +  M G     + +M   G  PN  
Sbjct: 503 VVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIV 562

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
                +D   K    DL +K+L + +     P+  ++N  +   C+  ++S+   V+ +M
Sbjct: 563 TYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLM 622

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
           ++ G  PN+ ++   +  +  +  + EA +L   MI  G  L    +T LIDGF +   +
Sbjct: 623 LKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNV 682

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
             A  L+ +MV  G  P+ +T+T+L  G         A   LD +      P+++ +N+L
Sbjct: 683 TFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNML 742

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
           I+   + G   +A  ++D +LE K++PD  T+
Sbjct: 743 INGYLRNGKLQEAFRLHDEMLERKIMPDDTTY 774



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 76/294 (25%), Positives = 142/294 (48%), Gaps = 7/294 (2%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK--ETQ--LPNFLSFNIALCNLCKLN 199
           EM + G + N +  N +++ L  +GRV    ++LK  ET+  +P  +++N  +    K  
Sbjct: 481 EMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAG 540

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
            + +   V   M  KG  PN+  +   ++ +CK      A ++L  +   G    + A+ 
Sbjct: 541 MMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYN 600

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
            LI GF +   +  A  +   M+++G  PN+  Y S I G+   KM   A    + +  E
Sbjct: 601 SLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKE 660

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
           G   D   +  LID  SK G+   AL +Y  ++    +PD  TF +L   +C +G     
Sbjct: 661 GIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDA 720

Query: 380 PKLV---CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
            KL+     L++  ++++YN L++ + + G   +A +L++ ML++   PD+ ++
Sbjct: 721 RKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTY 774



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/320 (21%), Positives = 134/320 (41%), Gaps = 33/320 (10%)

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           M   G +P+  + T L+     +   + A + L  +  +G   D    +V++    K G 
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEGM 192

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLS 400
           YDDA+ ++D +      P S                          E+E D  V +  ++
Sbjct: 193 YDDAVRLFDEM------PAS--------------------------EIEPDQRVCSVAIA 220

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
             CK    N+A+ +   M D GF P +++F  ++  L    +++EA+++   ++     +
Sbjct: 221 SLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKM 280

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
           +  + T ++          KA+ +F   + +      V+YTV IRG  E G  E+AY L 
Sbjct: 281 SVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELC 340

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKF 580
            QM+   + P+   + +++     ++  K    L +++ D+ I  D  T   L  ++ + 
Sbjct: 341 RQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGIP-DAFTYNILIHWLCQR 399

Query: 581 HSSSSAVNQLVEMCNLGLIP 600
                A+N   +M   G+ P
Sbjct: 400 RKIREALNLWEKMNETGVKP 419


>gi|413936859|gb|AFW71410.1| hypothetical protein ZEAMMB73_528560 [Zea mays]
          Length = 671

 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 114/441 (25%), Positives = 208/441 (47%), Gaps = 11/441 (2%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           ++E    ++ E+ R  C     TF   +R + +  +    +E  ++M ++G TP+    +
Sbjct: 231 QWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYS 290

Query: 159 IVMDVLFKIGRVDLGIKVLKETQL--PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
            +++   + GRVD  +K+L  T L  PN + +N AL  LC       V ++I  MVRK  
Sbjct: 291 TLVNGFSEHGRVDEALKLLN-TMLCRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDC 349

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
            PN   F  L+N  C+   +  A ++L  M   G    V ++  +I  F    R D A  
Sbjct: 350 PPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALK 409

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL-DMLESEGHAPDLVFHNVLIDCL 335
           L + M+   C P+ +++ +++K   +AK +  A   +  ML+ +    ++ F N+LID L
Sbjct: 410 LLKSML---CKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTF-NILIDSL 465

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVY 395
            + G   DA++V++ + + + +PD  T+ SL++     G   +   L   +   AD+  Y
Sbjct: 466 CQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMPCRADIFSY 525

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
           NA L   C A   + A +L   M+ +   P+  +F  L+  LC    ++ AI+VY+ +  
Sbjct: 526 NATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPK 585

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
                +   + A+++   E GR   A++       E    D +SY   ++GL    R ++
Sbjct: 586 YGITPDIFTYNALINGYSEQGRLDDALKFLSTMPCEP---DTISYNSILKGLCRAERWKD 642

Query: 516 AYILYSQMKHIAVPPNAYTYR 536
           A  L ++M      PN  T++
Sbjct: 643 AEKLVTEMLRKNCTPNEVTFK 663



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/336 (25%), Positives = 160/336 (47%), Gaps = 4/336 (1%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           + GR+E V  ++ E+ R  C     TF   +    +  +    +E  ++M ++G+ P+  
Sbjct: 330 IAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVV 389

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
           + N ++       R D  +K+LK     P+ +SFN  L  LCK     +  +++  M++K
Sbjct: 390 SYNTIISCFSDQARADDALKLLKSMLCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKK 449

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
               N   F IL++  C+ G++ +A ++  LM        +  ++ LI+GF      +MA
Sbjct: 450 DCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMA 509

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             L+  M    C  ++ +Y + +KG   A  +  A   +  + +E   P+ V  N+LI  
Sbjct: 510 FDLFRSM---PCRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISS 566

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVV 394
           L + G  + A+DVY+ + +  + PD +T+ +L++     GR     K +  +  E D + 
Sbjct: 567 LCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTMPCEPDTIS 626

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           YN++L   C+A     A KL   ML K  TP+  +F
Sbjct: 627 YNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 662



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 109/505 (21%), Positives = 222/505 (43%), Gaps = 24/505 (4%)

Query: 107 VGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK 166
           V E AR        T+   +  Y R    G + +A   +      P+T+  N V+  L  
Sbjct: 172 VVEAARASGTANVVTYTALIDGYCRS---GRLADALRLIASMPVAPDTYTYNTVLKGLCC 228

Query: 167 IGRVDLGIKVLKE----TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
             + +   ++++E    +  PN ++F   +   C+   +    +++  M + G  P+V +
Sbjct: 229 AKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVII 288

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           +  L+N F + GR+ EA +LL  M+    ++  NA    + G     R +  G L  +MV
Sbjct: 289 YSTLVNGFSEHGRVDEALKLLNTMLCRPNTVCYNA---ALKGLCIAGRWEEVGELIAEMV 345

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
           +  C PN  T+++LI    + ++   A   L+ ++  G+ PD+V +N +I C S     D
Sbjct: 346 RKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARAD 405

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALL 399
           DAL +   +L     PD+ +F ++L  +C + R+    +LV  +   +   + + +N L+
Sbjct: 406 DALKLLKSML---CKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILI 462

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE-AINVYQGIVMNNP 458
              C+ G    A++++  M      PD  ++  L+ G    + +DE A ++++ +     
Sbjct: 463 DSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGF-SEQGLDEMAFDLFRSMPCR-- 519

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
             +   + A +  L  A R   A +L    + E    + V++ + I  L + G    A  
Sbjct: 520 -ADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAID 578

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
           +Y QM    + P+ +TY  ++  + ++  +    + L  +      + Y++   + K + 
Sbjct: 579 VYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTMPCEPDTISYNS---ILKGLC 635

Query: 579 KFHSSSSAVNQLVEMCNLGLIPDEM 603
           +      A   + EM      P+E+
Sbjct: 636 RAERWKDAEKLVTEMLRKNCTPNEV 660



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 79/376 (21%), Positives = 162/376 (43%), Gaps = 42/376 (11%)

Query: 174 IKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKM 233
           ++ LK +   + +S N  +   C+   + + + V+    R     NV  +  L++ +C+ 
Sbjct: 139 LEALKASGAADAVSHNTLVAGYCRDGSLGDAERVV-EAARASGTANVVTYTALIDGYCRS 197

Query: 234 GRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTY 293
           GR+A+A +L+  M     + + N    ++ G    ++ + A  L  +M++N C PN VT+
Sbjct: 198 GRLADALRLIASMPVAPDTYTYN---TVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTF 254

Query: 294 TSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE 353
            + I+ F +  +   A   L+ +   G  PD++ ++ L++  S+ G  D+AL + + +L 
Sbjct: 255 ATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTML- 313

Query: 354 LKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVK 413
                                     P  VC          YNA L   C AG   +  +
Sbjct: 314 ------------------------CRPNTVC----------YNAALKGLCIAGRWEEVGE 339

Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
           L   M+ K   P++ +F  L+  LC  R ++ A+ V + +       +   +  I+    
Sbjct: 340 LIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFS 399

Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
           +  R   A++L +  + +    D +S+   ++ L +  R  +A  L ++M       N  
Sbjct: 400 DQARADDALKLLKSMLCKP---DTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEM 456

Query: 534 TYRVMLLSFCKERNIK 549
           T+ +++ S C+   +K
Sbjct: 457 TFNILIDSLCQNGQVK 472



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 122/271 (45%), Gaps = 5/271 (1%)

Query: 288 PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
           P V++   LIK     +  + A   L+ L++ G A D V HN L+    + GS  DA  V
Sbjct: 114 PAVISCNILIKKLCARRRLADAERVLEALKASGAA-DAVSHNTLVAGYCRDGSLGDAERV 172

Query: 348 YDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGF 407
            +         +  T+ +L+   C SGR +   +L+  + V  D   YN +L   C A  
Sbjct: 173 VEAA-RASGTANVVTYTALIDGYCRSGRLADALRLIASMPVAPDTYTYNTVLKGLCCAKQ 231

Query: 408 PNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTA 467
             QA +L   M+     P+  +F   +R  C    +D A+ + + +       +  +++ 
Sbjct: 232 WEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYST 291

Query: 468 IVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIA 527
           +V+   E GR  +A++L    +      + V Y  A++GL   GR EE   L ++M    
Sbjct: 292 LVNGFSEHGRVDEALKLLNTMLCRP---NTVCYNAALKGLCIAGRWEEVGELIAEMVRKD 348

Query: 528 VPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
            PPN  T+  ++ S C+ R ++    +L+ +
Sbjct: 349 CPPNDATFSTLINSLCQNRLVEYAVEVLEQM 379


>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like, partial [Brachypodium distachyon]
          Length = 907

 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 128/513 (24%), Positives = 229/513 (44%), Gaps = 57/513 (11%)

Query: 119 AQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK 178
           A +F L LR +         L  FDEMG+ G      + N +++ L + G +   + V +
Sbjct: 94  AASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQ 153

Query: 179 ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAE 238
           +                               M   G  P+     I+   +C+ GR+A 
Sbjct: 154 Q-------------------------------MRCAGTLPDDFTVAIMAKAYCRDGRVAH 182

Query: 239 AYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIK 298
           A   L  M  +G  +++ A+  ++DG+ R+ + ++A  L   +   G SPNVVTYT L+K
Sbjct: 183 AADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVK 242

Query: 299 GF-MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
           G+  E +M        ++ E+E    D V +  LI+   + G  +DA  V D +++  + 
Sbjct: 243 GYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQ 302

Query: 358 PDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKL 414
            + + + ++++  C  GR   + KL+   E   V  D   YN L+  +C+ GF  +A + 
Sbjct: 303 VNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFET 362

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
            + M+  GFT    ++  LL G C    ID+A+ ++  ++      N    + ++D   +
Sbjct: 363 CDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFK 422

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
           AG+  +A+ L++  +      +VV+    I GL +  R  EA  L+ +MK  + P ++ T
Sbjct: 423 AGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLT 482

Query: 535 YRVMLLSFCKERNIKMVKRLLQDVIDARIELD---YHTSIRL-TKFIFKF--HSSSSAVN 588
           YR ++  +CK  ++    ++       RIE++   +  S+ +   FI        S  VN
Sbjct: 483 YRTLIDGYCKLGDLGRATQI-------RIEMENLGFVPSVEMFNSFITGLFIAKQSGKVN 535

Query: 589 QL-VEMCNLGLIPDEM--------WRKLGLLSD 612
            + VEM   GL P+ +        W K G L D
Sbjct: 536 DIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHD 568



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 107/461 (23%), Positives = 212/461 (45%), Gaps = 12/461 (2%)

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP----NFLSFNIALCNLCKLND 200
           M + G  PN  + + ++D  FK G+ +  + + KET       N ++ N  +  LCK   
Sbjct: 401 MLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRR 460

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
           ++  +++   M       +   +  L++ +CK+G +  A Q+   M  LG   SV  +  
Sbjct: 461 MTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNS 520

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF-MEAKMFSIAFSFLDMLESE 319
            I G    ++      +  +M   G SPN VTY +LI G+  E  +      + +M+E +
Sbjct: 521 FITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVE-K 579

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
           G  P+L   +VL+ C  + G  D+A  V   L +  ++ D    CS  ST+ + G+ + +
Sbjct: 580 GLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQD----CSA-STLNI-GKVAHI 633

Query: 380 PKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
            + + G   ++  +++N ++   CK G    A  L+  +  KGF PDN+++  L+ G   
Sbjct: 634 IESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSA 693

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
           +  ID A  +   ++      N   + +++  L ++    +A+ LF +   +    + ++
Sbjct: 694 SGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAIT 753

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           Y   I G  + G T EA+ L  +M    + P  +TY +++   C +  ++   +LL  +I
Sbjct: 754 YNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMI 813

Query: 560 DARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           +  ++ ++ T   L +   +  +  +      EM   GL+P
Sbjct: 814 ENNVDPNFITYWTLIQGYARCGNMKAITKLYNEMHICGLLP 854



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 124/520 (23%), Positives = 224/520 (43%), Gaps = 29/520 (5%)

Query: 98  GRFETVRGIVGELAR-VGCVIKAQTFLLFLRIY-WRGEMYGMVLEAFDEMGRFGFTPNTF 155
           GR E    +V E+      VI    +   +  Y  RG M        DEM   G   N F
Sbjct: 248 GRMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMED-ANRVRDEMIDAGVQVNMF 306

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKETQLPNF----LSFNIALCNLCKLNDVSNVKDVIGMM 211
             N +++   K+GR+    K+L+  +         S+N  +   C+   ++   +   MM
Sbjct: 307 VYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMM 366

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
           VR GF      +  LLN FC  G I +A +L  LM+  G   +  + + L+DGF +  + 
Sbjct: 367 VRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKT 426

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           + A  LW++ +  G + NVVT  ++I G  + +  + A      ++      D + +  L
Sbjct: 427 EQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTL 486

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL---SGRFSLLPKLVCGLEV 388
           ID   K+G    A  +   +  L  VP    F S ++ + +   SG+ + +   +    +
Sbjct: 487 IDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGL 546

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
             + V Y AL++ +CK G  + A  LY  M++KG  P+ +    L+       K+DEA  
Sbjct: 547 SPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANL 606

Query: 449 VYQGIV---MNNPAVNAHVHTAIVDRLIE--AGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           V Q +    M      + ++   V  +IE  AG  H++ ++               + + 
Sbjct: 607 VLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIM--------------WNIV 652

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           I GL + GR  +A  L+  +K     P+ +TY  ++       +I +   L  +++ AR+
Sbjct: 653 ILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARL 712

Query: 564 ELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
             +  T   L   + K  + S AV+   ++ + G+ P+ +
Sbjct: 713 TPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAI 752



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 100/481 (20%), Positives = 202/481 (41%), Gaps = 11/481 (2%)

Query: 77  RDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYG 136
           +D+     SFD ++       G+ +    +  E+ + G     ++    L    +    G
Sbjct: 88  KDFSFSAASFDLLLRAHAD-AGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIG 146

Query: 137 MVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIAL 192
             +  F +M   G  P+ F   I+     + GRV      LKE +      N ++++  +
Sbjct: 147 TAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVM 206

Query: 193 CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
              C++      + ++  +  KG  PNV  + +L+  +CK GR+ EA +++   I     
Sbjct: 207 DGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVK-EIKENEK 265

Query: 253 LSVN--AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
           + ++  A+  LI+G+ +  R++ A  + ++M+  G   N+  Y ++I G+ +        
Sbjct: 266 IVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVE 325

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
             L   E  G   D   +N L+D   + G    A +  D ++       + T+ +LL+  
Sbjct: 326 KLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGF 385

Query: 371 CLSGRFSLLPK---LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           C  G      K   L+    V  + +  + LL  F KAG   QA+ L+   L +G   + 
Sbjct: 386 CSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNV 445

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
            +   ++ GLC  R++ EA  ++  +   +   ++  +  ++D   + G   +A Q+   
Sbjct: 446 VTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIE 505

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN 547
                +   V  +   I GL    ++ +   +  +M    + PN  TY  ++  +CKE N
Sbjct: 506 MENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGN 565

Query: 548 I 548
           +
Sbjct: 566 L 566



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 98/431 (22%), Positives = 178/431 (41%), Gaps = 61/431 (14%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNL 195
           E F  M  +    ++     ++D   K+G +    ++  E +    +P+   FN  +  L
Sbjct: 466 ELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGL 525

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
                   V D+   M  KG  PN   +  L+  +CK G + +A  L   M+  G   ++
Sbjct: 526 FIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNL 585

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEK-----MVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
              +VL+  F R  ++D A  + +K     M+Q+ CS + +    +              
Sbjct: 586 FICSVLVSCFYREGKVDEANLVLQKLADTDMIQD-CSASTLNIGKVAH------------ 632

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
             ++ L    H    +  N++I  L K+G   DA ++++ L     +PD++T+ SL+   
Sbjct: 633 -IIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGC 691

Query: 371 CLSGRFSL---LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
             SG   L   L   +    +  ++V YN+L+   CK+   ++AV L+N +  KG +P+ 
Sbjct: 692 SASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNA 751

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
            ++  L+ G C                                   + G   +A +L ++
Sbjct: 752 ITYNTLIDGHC-----------------------------------KDGNTTEAFKLKQK 776

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN 547
            I E     V +YT+ I GL   G  EEA  L  QM    V PN  TY  ++  + +  N
Sbjct: 777 MIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGN 836

Query: 548 IKMVKRLLQDV 558
           +K + +L  ++
Sbjct: 837 MKAITKLYNEM 847



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 96/471 (20%), Positives = 196/471 (41%), Gaps = 53/471 (11%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ-----LPNFLSFNIALCNLCKLNDVSN 203
           G +PN     +++    K GR++   KV+KE +     + + +++   +   C+   + +
Sbjct: 229 GLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMED 288

Query: 204 VKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLID 263
              V   M+  G   N+ ++  ++N +CK+GR+ E  +LL      G +L   ++  L+D
Sbjct: 289 ANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVD 348

Query: 264 GFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP 323
           G+ R   +  A    + MV+NG +   +TY +L+ GF        A     ++   G  P
Sbjct: 349 GYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVP 408

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV 383
           + +  + L+D   K G  + AL+++   L   L  +  T  ++++ +C + R +   +L 
Sbjct: 409 NEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELF 468

Query: 384 CGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
             ++      D + Y  L+  +CK G   +A ++   M + GF P    F   + GL  A
Sbjct: 469 HRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIA 528

Query: 441 RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSY 500
           ++  +  ++                                +++  + +      + V+Y
Sbjct: 529 KQSGKVNDI-------------------------------RVEMSAKGLSP----NTVTY 553

Query: 501 TVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
              I G  + G   +A ILY +M    + PN +   V++  F +E  +     +LQ + D
Sbjct: 554 GALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLAD 613

Query: 561 ARIELDYHTS-IRLTKFIFKFHSSSSAVNQ---------LVEMCNLGLIPD 601
             +  D   S + + K      S +   +Q         ++ +C LG + D
Sbjct: 614 TDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVAD 664


>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Vitis vinifera]
          Length = 835

 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 137/602 (22%), Positives = 268/602 (44%), Gaps = 54/602 (8%)

Query: 48  LAPHIV-HSTLLN--CPSDLIALSFFIWCAKQ-RDYFHDVQSFDHMISVVTRLTGRFETV 103
           L P+++ ++TL++  C S  +  + +++     +    DV ++  +++ + + +G+ E  
Sbjct: 83  LEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCK-SGKVEEA 141

Query: 104 RGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRF---GFTPNTFARNIV 160
           + +  E+  VG V    ++   +   ++    G V EAF   GR    G   +      +
Sbjct: 142 KSVFREMEEVGVVPNRFSYATLIDSLFK---EGNVAEAFVLQGRMVVRGIGFDVVVYTAL 198

Query: 161 MDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
           MD LFK G      D+   +L+E+ +PN ++++  +   CKL DV+  + ++  M  K  
Sbjct: 199 MDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHI 258

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF----------- 265
           +PNV ++  +++ + K G + EA  ++  M+      +V  +  LIDG+           
Sbjct: 259 FPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALD 318

Query: 266 ------------------------RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
                                   +R  R++ A  L++ M+  G  P+ V YTS++ GF 
Sbjct: 319 LFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFF 378

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           +A   S AF+    +  +    D+V +NVLI+ L K+G Y+     + G+ +L L PDS 
Sbjct: 379 KAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESE-SFHTGMRQLGLAPDSA 437

Query: 362 TFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           TF ++++  C  G      KL+  ++   ++ + +  N L+   C AG   + + L N M
Sbjct: 438 TFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDM 497

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
           L  GF P   +   +L     +R+ D  ++++  +V     ++   +  ++      G  
Sbjct: 498 LVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMI 557

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            +A  +F+  + +    D+++Y   I G       ++A+ ++SQM    V PN  TY ++
Sbjct: 558 RRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNIL 617

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGL 598
           L      R IK    L+  + +  +  +  T   L     K  +    V    EM   G 
Sbjct: 618 LGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGF 677

Query: 599 IP 600
           +P
Sbjct: 678 VP 679



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/443 (21%), Positives = 209/443 (47%), Gaps = 43/443 (9%)

Query: 158 NIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N+++D   + G +   +++L+    E   P+ +++N  +   CK+ D+   K ++G +  
Sbjct: 21  NVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISL 80

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
               PNV  +  L++ +CK   + +A  +   M        V  +T +++G  +  +++ 
Sbjct: 81  VNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEE 140

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  ++ +M + G  PN  +Y +LI    +    + AF     +   G   D+V +  L+D
Sbjct: 141 AKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMD 200

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE---A 390
            L K G  ++A D++  LLE  LVP+  T+ +L+   C  G  +    L+  +E +    
Sbjct: 201 GLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFP 260

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           +++VY++++  + K G  N+A+ +   M+ +   P+ + +  L+ G   A +   A++++
Sbjct: 261 NVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLF 320

Query: 451 Q-----GIVMNNPAVNAHV------------------------------HTAIVDRLIEA 475
           +     G+  NN  +++ V                              +T+++D   +A
Sbjct: 321 KEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKA 380

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
           G+   A  + +    +    DVV+Y V I GL + G+  E+   ++ M+ + + P++ T+
Sbjct: 381 GKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATF 439

Query: 536 RVMLLSFCKERNIKMVKRLLQDV 558
             M+ ++CKE N+    +LL ++
Sbjct: 440 NTMINAYCKEGNLGNALKLLNEM 462



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 95/433 (21%), Positives = 192/433 (44%), Gaps = 11/433 (2%)

Query: 136 GMVLEAFDEMGRF---GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIAL 192
           G++ EA D M +       PN F    ++D  FK  +  + + + KE +       N  +
Sbjct: 276 GLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVI 335

Query: 193 ----CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
                NL +   +    ++   M+ +G  P+   +  +++ F K G+ ++A+ +   M  
Sbjct: 336 DSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTE 395

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
             +   V A+ VLI+G  +L + +   +    M Q G +P+  T+ ++I  + +      
Sbjct: 396 KSSGFDVVAYNVLINGLFKLGKYESESF-HTGMRQLGLAPDSATFNTMINAYCKEGNLGN 454

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A   L+ ++S G  P+ +  N+L+  L   G  +  +D+ + +L +   P   T  ++L 
Sbjct: 455 ALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLD 514

Query: 369 TVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
               S R  ++  +   + G+ V+ DL  YN L+S FC+ G   +A  ++  M+ KG   
Sbjct: 515 ASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILA 574

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           D  ++  L+ G C +  + +A  V+  ++    + N   +  ++  L  A    +A  L 
Sbjct: 575 DIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLV 634

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
            +        +  +Y + + G  + G  +E   LY +M      P   TY V++  F K 
Sbjct: 635 NQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKG 694

Query: 546 RNIKMVKRLLQDV 558
           + +   K L+Q++
Sbjct: 695 KKMSQAKELMQEM 707



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/423 (23%), Positives = 193/423 (45%), Gaps = 8/423 (1%)

Query: 129 YWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPN 184
           Y++ +  G+ L+ F EM   G   N F  +  ++ L + GR++   ++ K+      LP+
Sbjct: 307 YFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPD 366

Query: 185 FLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLG 244
            +++   +    K    S+  ++   M  K    +V  + +L+N   K+G+  E+     
Sbjct: 367 RVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHT 425

Query: 245 LMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
            M  LG +     +  +I+ + +   L  A  L  +M   G  PN +T   L++    A 
Sbjct: 426 GMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAG 485

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
                   L+ +   G  P    H  ++D  SK    D  L ++D L+ + +  D  T+ 
Sbjct: 486 EIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYN 545

Query: 365 SLLSTVCLSG---RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
           +L+ST C  G   R +L+ K + G  + AD++ YNAL+  +C +    +A  +++ ML +
Sbjct: 546 TLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTE 605

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
           G +P+  ++  LL GL  AR I EA  +   +       NA  +  +V    + G   + 
Sbjct: 606 GVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKEC 665

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
           ++L+   I + +     +Y V I    +G +  +A  L  +M+   +PPN+ TY +++  
Sbjct: 666 VKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICG 725

Query: 542 FCK 544
           + K
Sbjct: 726 WYK 728



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/379 (23%), Positives = 179/379 (47%), Gaps = 5/379 (1%)

Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
           +V  F +L++ +C+ G I+ A +LL  M T G +  +  +  L++GF ++  L  A  L 
Sbjct: 16  SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLM 75

Query: 279 EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
            ++      PNV+TYT+LI  + +++    A    D +  +   PD+V +  +++ L K 
Sbjct: 76  GEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKS 135

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVV 394
           G  ++A  V+  + E+ +VP+ +++ +L+ ++   G     F L  ++V    +  D+VV
Sbjct: 136 GKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVV-RGIGFDVVV 194

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           Y AL+    KAG  N A  ++  +L++   P+  ++  L+ G C    +++   + Q + 
Sbjct: 195 YTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEME 254

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
             +   N  V+++IVD   + G  ++A+ + R+ +      +V  Y   I G  +  +  
Sbjct: 255 EKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRG 314

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLT 574
            A  L+ +MK   +  N +     + +  +   ++    L +D++   +  D      + 
Sbjct: 315 IALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMM 374

Query: 575 KFIFKFHSSSSAVNQLVEM 593
              FK    S A N   EM
Sbjct: 375 DGFFKAGKESDAFNIAQEM 393



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/308 (24%), Positives = 145/308 (47%), Gaps = 10/308 (3%)

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLND 200
           M + G  P++   N +++   K G +   +K+L E +     PN ++ NI +  LC   +
Sbjct: 427 MRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGE 486

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
           +    D++  M+  GF+P     + +L+   K  R      +   ++ +G  L ++ +  
Sbjct: 487 IEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNT 546

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           LI  F RL  +  A  +++ M+  G   +++TY +LI G+  +     AF+    + +EG
Sbjct: 547 LISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEG 606

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
            +P++  +N+L+  LS      +A  + + + E  LVP++ T+  L+S     G      
Sbjct: 607 VSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECV 666

Query: 381 KLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
           KL C +  +        YN L+S F K    +QA +L   M  +G  P++ ++  L   +
Sbjct: 667 KLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDIL---I 723

Query: 438 CGARKIDE 445
           CG  K+ +
Sbjct: 724 CGWYKLSK 731



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 101/215 (46%)

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
           E+   +  +N L+  +C+ G  ++AV+L   M  +G  PD  ++  L+ G C    +  A
Sbjct: 12  EIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTA 71

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
             +   I + N   N   +T ++D   ++     A+ ++    V+    DVV+YT  + G
Sbjct: 72  KKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNG 131

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           L + G+ EEA  ++ +M+ + V PN ++Y  ++ S  KE N+     L   ++   I  D
Sbjct: 132 LCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFD 191

Query: 567 YHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
                 L   +FK   +++A +    +    L+P+
Sbjct: 192 VVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPN 226


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 120/439 (27%), Positives = 190/439 (43%), Gaps = 36/439 (8%)

Query: 147 RFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVS 202
           R     ++F  N ++  L   G V    DL +++  E  +P  +++N  +  L +   V 
Sbjct: 301 RLSKKASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVE 360

Query: 203 NVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLI 262
             +     M   G  P+V  +  LLN +CK G + EA  L G +   G + +V  + +LI
Sbjct: 361 AAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILI 420

Query: 263 DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
           DG+ RL  L+ A  L E+MV+ GC P+V TYT L+KG   A   ++A  F D + S+G  
Sbjct: 421 DGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQ 480

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL 382
           PD   +N  I     +G+   A                     L   + L G        
Sbjct: 481 PDCFAYNTRIRAELTLGAIAKAF-------------------RLREVMMLEG-------- 513

Query: 383 VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
                + +D V YN L+   CK G  N A  L   M+  G  PD  ++  L+   C    
Sbjct: 514 -----ISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGL 568

Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTV 502
           + EA   ++ ++ +  A +A  +T  +      G  + A   FR+ + E    + ++Y V
Sbjct: 569 LREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNV 628

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
            I  L   GRT+ AY  + +M    + PN YTY +++   CKE N +   R   ++    
Sbjct: 629 LIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNG 688

Query: 563 IELDYHTSIRLTKFIFKFH 581
           I  DY T   L K   + H
Sbjct: 689 IHPDYLTHKALFKGFDEGH 707



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 124/545 (22%), Positives = 231/545 (42%), Gaps = 39/545 (7%)

Query: 109 ELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIG 168
           E+A  G     +     LR+      +  +     EM + G  P+    N ++D   K G
Sbjct: 192 EMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEG 251

Query: 169 RVDLGIKVLKETQ------LPNFLSFNIALCNLCKLNDVSNVKDVI-GMMVRKGFYPNVR 221
           R D    +LKE +      LPN ++ N+ +  L +  D+    +++ GM + K    +  
Sbjct: 252 RNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKK--ASSF 309

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            +  L+      G + +A  L   M   G   +V  +  +I G  +  +++ A   + +M
Sbjct: 310 TYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEM 369

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
              G  P+V+TY SL+ G+ +A     A      L   G AP ++ +N+LID   ++G  
Sbjct: 370 RAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDL 429

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLS------TVCLSGRF--SLLPKLVCGLEVEADLV 393
           ++A  + + ++E   +PD  T+  L+       ++ ++  F   +L K   GL+   D  
Sbjct: 430 EEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSK---GLQ--PDCF 484

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            YN  +      G   +A +L   M+ +G + D  ++  L+ GLC    +++A ++   +
Sbjct: 485 AYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKM 544

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
           V N    +   +T ++    E G   +A + F+  I +      V+YTV I      G  
Sbjct: 545 VHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNL 604

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
             AY  + +M    V PN  TY V++ + C+    ++  R   ++++  +  + +T   L
Sbjct: 605 YSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLL 664

Query: 574 TKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTPVSLFDGFVPCERRAGN 633
                K  +   A+    EM   G+ PD +  K            +LF GF       G+
Sbjct: 665 IDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHK------------ALFKGF-----DEGH 707

Query: 634 ANHLL 638
            NH +
Sbjct: 708 MNHAI 712



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/303 (22%), Positives = 139/303 (45%), Gaps = 12/303 (3%)

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
           ++  S    + S G APD+   N ++  LS    +DD   V+  +L+L + P   T+ +L
Sbjct: 184 TLCLSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTL 243

Query: 367 LSTVCLSGRFSLLPKLVCGLEVEA-----DLVVYNALLSYFCKAGFPNQAVKLYNTM-LD 420
           L +    GR   +  L+  +E        + V +N +++   + G   +A ++   M L 
Sbjct: 244 LDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLS 303

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV--HTAIVDRLIEAGRC 478
           K  +  ++++  L+ GL     + +A ++   + M N  +   V  + A++  L+++G+ 
Sbjct: 304 KKAS--SFTYNPLITGLLAKGFVKKADDLQ--LEMENEGIMPTVVTYNAMIHGLLQSGQV 359

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
             A   F          DV++Y   + G  + G  +EA +L+  ++H  + P   TY ++
Sbjct: 360 EAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNIL 419

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGL 598
           +  +C+  +++  +RL +++++     D  T   L K      S + A     EM + GL
Sbjct: 420 IDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGL 479

Query: 599 IPD 601
            PD
Sbjct: 480 QPD 482


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 114/527 (21%), Positives = 223/527 (42%), Gaps = 43/527 (8%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRG--------- 132
           DV ++  +I    ++    E+ + +V E+   GC +   T+   +    R          
Sbjct: 242 DVYTYSTLIEAYCKVR-DLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGY 300

Query: 133 ----EMYGMVLEAF----------------------DEMGRFGFTPNTFARNIVMDVLFK 166
               E YG+V + F                      DEM   G  PN    + ++D   +
Sbjct: 301 KKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMR 360

Query: 167 IGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
            G  D   K++KE       PN ++++  +  LCKL  +     ++  M + G+  +   
Sbjct: 361 QGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMT 420

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           + +++    +     EA+ LL  M   G S +V  ++++I+G  ++   + A  L E+M+
Sbjct: 421 YNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMI 480

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
            +G  PN   Y  LI G+     FS+A   L  +  E   PDL  +N LI  LS +G  D
Sbjct: 481 ADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMD 540

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALL 399
           +A++ YD +LE    P+ +T+  L+    ++G      +L+  +    +  +  +Y  +L
Sbjct: 541 EAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQIL 600

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
             + K+    +      +ML+KG  PDN  +  ++  L  +  +  A++V   I  N   
Sbjct: 601 EGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLV 660

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            ++ ++ +++    +A    KA+ L      +     +  Y   I G  +      A  +
Sbjct: 661 PDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNI 720

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           ++ +    +PPN  TY  ++  +CK  +I+    L  +++   +  D
Sbjct: 721 FNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPD 767



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/475 (21%), Positives = 203/475 (42%), Gaps = 12/475 (2%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G  +    IV E++  G      T+   +R   +    G       +M + G+  +T   
Sbjct: 362 GNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTY 421

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N+V++   +    +    +L E +     PN  +++I +  LC++ +      ++  M+ 
Sbjct: 422 NLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIA 481

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G  PN  ++  L++ +C+ G  + A + L  M     +  +  +  LI G   + ++D 
Sbjct: 482 DGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDE 541

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A   +++M++ G  PN  TY  LI G+  A     A   L  + + G  P+   +  +++
Sbjct: 542 AIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILE 601

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA--- 390
              K  + +        +LE  L+PD+  +  ++  +  SG       ++  +E      
Sbjct: 602 GYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVP 661

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           D ++Y +L+S FCKA    +AV L + M  KG  P    +  L+ G C +  I  A N++
Sbjct: 662 DSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIF 721

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
             I+      N   +T ++D   +AG    AI L+   + E    D   Y+V   G    
Sbjct: 722 NSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNS 781

Query: 511 GRTEEAYILYSQM--KHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           G  ++A  +  +M  +  A+     ++  ++  FCK   ++   + L  ++D  I
Sbjct: 782 GDLQQALFITEEMIARGYAI---ISSFNTLVHGFCKRGKLQETVKFLHVMMDKDI 833



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 102/453 (22%), Positives = 207/453 (45%), Gaps = 10/453 (2%)

Query: 85  SFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDE 144
           ++D++I  + +L GR      I+ ++ ++G +    T+ L +  + R           +E
Sbjct: 385 TYDNLIRGLCKL-GRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNE 443

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLND 200
           M + G +PN +  +I+++ L +IG  +    +L++       PN   +   +   C+   
Sbjct: 444 MRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGS 503

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
            S   + +  M R+   P++  +  L+     +G++ EA +    M+  G   +   +  
Sbjct: 504 FSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGG 563

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           LI G+     L+ A  L  +M+ +G +PN   Y  +++G+ ++       S L  +  +G
Sbjct: 564 LIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKG 623

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
             PD   + ++I  LS  G    A+ V   + +  LVPDS  + SL+S  C +       
Sbjct: 624 LMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAV 683

Query: 381 KLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
            L+  +    +E  +  YNAL+  FCK+   + A  ++N+++ KG  P+  ++  L+ G 
Sbjct: 684 GLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGY 743

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
           C A  I +AI++Y  ++    A +A V++ +      +G   +A+ +    I   Y + +
Sbjct: 744 CKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAI-I 802

Query: 498 VSYTVAIRGLLEGGRTEEAY-ILYSQMKHIAVP 529
            S+   + G  + G+ +E    L+  M    VP
Sbjct: 803 SSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVP 835



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 136/577 (23%), Positives = 246/577 (42%), Gaps = 39/577 (6%)

Query: 42  QDFPIILAPHIVHSTLLNCPSD-----LIALSFFIWC-AKQRDYFHDVQSFDHMISVVTR 95
            D P  L+P  + S L  C S       + L FF W   +         +F H+ +V   
Sbjct: 73  SDIPSRLSPAALSSLLRRCNSSPRLHPKLLLDFFYWSRTRLAPSAPAPDAFAHL-AVSLC 131

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
             G +    G++ ++ R        T  L L    R       L   D+ GR        
Sbjct: 132 AAGLYPQANGLLDQMIRA-----YPTPPLVLSSVHR------ALSGSDQ-GR-------- 171

Query: 156 ARNIVMDVLF----KIGRVDLGIKV---LKETQL-PNFLSFNIALCNLCKLNDVSNVKDV 207
            R +V+DVL     K GRV  G +V   +K+  L P+    N  L +L + + +  +  V
Sbjct: 172 -RPVVLDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKV 230

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
            G M   G  P+V  +  L+  +CK+  +  A +++  M   G SL+V  +  LI G  R
Sbjct: 231 RGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCR 290

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
              ++ A    ++M   G  P+  TY ++I G  +      A   LD +   G  P++V 
Sbjct: 291 AGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVV 350

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF---SLLPKLVC 384
           ++ LID   + G+ D+A  +   +    + P+  T+ +L+  +C  GR    S + K + 
Sbjct: 351 YSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMT 410

Query: 385 GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
            +   AD + YN ++    +     +A  L N M   G +P+ Y++  ++ GLC   + +
Sbjct: 411 KIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESE 470

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
            A  + + ++ +    NA V+  ++      G    A +  ++   E    D+  Y   I
Sbjct: 471 RASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLI 530

Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
            GL   G+ +EA   Y +M      PN +TY  ++  +    N++  ++LL  ++++ + 
Sbjct: 531 IGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLN 590

Query: 565 LDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            +     ++ +  FK  +     + L  M   GL+PD
Sbjct: 591 PNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPD 627



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/385 (22%), Positives = 178/385 (46%), Gaps = 5/385 (1%)

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
           + ++L++ + K GR+ +  +++ LM  LG + S+     L+    R   LD+   +   M
Sbjct: 175 VLDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFM 234

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
              G SP+V TY++LI+ + + +    A   ++ +   G + ++V +N LI  L + G+ 
Sbjct: 235 EGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAI 294

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLVCGLEVEADLVVYNA 397
           ++A      + +  LVPD +T+ ++++ +C  GR      LL ++ C   +  ++VVY+ 
Sbjct: 295 EEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCA-GLMPNVVVYST 353

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
           L+  F + G  ++A K+   M   G  P+  ++  L+RGLC   ++  A  + + +    
Sbjct: 354 LIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIG 413

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAY 517
              +   +  +++  +      +A  L           +V +Y++ I GL + G +E A 
Sbjct: 414 YMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERAS 473

Query: 518 ILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFI 577
            L  QM    + PNA+ Y  ++  +C+E +  +    L+ +    +  D +    L   +
Sbjct: 474 GLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGL 533

Query: 578 FKFHSSSSAVNQLVEMCNLGLIPDE 602
                   A+    EM   G  P++
Sbjct: 534 SNVGKMDEAIEYYDEMLEKGFQPND 558



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 152/328 (46%), Gaps = 10/328 (3%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE---TQL-PNFLSFNIALC 193
            +E +DEM   GF PN F    ++      G ++   ++L +   + L PN   +   L 
Sbjct: 542 AIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILE 601

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
              K +++  V   +  M+ KG  P+ R++ I+++     G +  A  +L ++   G   
Sbjct: 602 GYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVP 661

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
               +  LI GF +   ++ A  L ++M + G  P +  Y +LI GF ++   S A +  
Sbjct: 662 DSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIF 721

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           + +  +G  P+ V +  LID   K G   DA+D+Y+ +L   + PD++ + S+L+  C S
Sbjct: 722 NSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVY-SVLAAGC-S 779

Query: 374 GRFSLLPKLVCGLEVEAD----LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
               L   L    E+ A     +  +N L+  FCK G   + VK  + M+DK   P   +
Sbjct: 780 NSGDLQQALFITEEMIARGYAIISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLT 839

Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNN 457
              ++ GL  A K+ EA  ++  +   N
Sbjct: 840 VENIVIGLGEAGKLSEAHTIFVELQQKN 867


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 118/521 (22%), Positives = 227/521 (43%), Gaps = 35/521 (6%)

Query: 80  FHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVL 139
             DV+S +H+  +V   TG  E     +  +   G V         +R + R        
Sbjct: 100 LEDVESNNHLRQLVR--TGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAA 157

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-PNFLSFNIALCNLCKL 198
           +  + +   G  P+    N+++    K G ++  + VL    + P+ +++N  L +LC  
Sbjct: 158 KILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDS 217

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
             +    +V+  M+++  YP+V  + IL+   C+   + +A +LL  M   G +  V  +
Sbjct: 218 GKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTY 277

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
            VL++G  +  RLD A      M  +GC PNV+T+  +++       +  A   L  +  
Sbjct: 278 NVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLR 337

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL 378
           +G +P +V  N+LI+ L + G    A+D+ +                             
Sbjct: 338 KGFSPSVVTFNILINFLCRKGLLGRAIDILEK---------------------------- 369

Query: 379 LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
           +PK  C    + + + YN LL  FCK    ++A++    M+ +G  PD  ++  +L  LC
Sbjct: 370 MPKHGC----QPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALC 425

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
              K+++A+ +   +     +     +  ++D L +AG+  KAI+L      +    D +
Sbjct: 426 KDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTI 485

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           +Y+  + GL   G+ +EA   + + + + V PNA T+  ++L  CK R        L  +
Sbjct: 486 TYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYM 545

Query: 559 IDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLI 599
           I+   +    +   L + +     +  A+  L E+CN GL+
Sbjct: 546 INRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 164/358 (45%), Gaps = 14/358 (3%)

Query: 254 SVNAWTVL--IDGFRRLRRLDMAGYL------WEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           S N+  VL  ++    LR+L   G L       E MV +G  P+++  T+LI+GF     
Sbjct: 93  SANSSFVLEDVESNNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGK 152

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
              A   L++LE  G  PD++ +NV+I    K G  ++AL V D    + + PD  T+ +
Sbjct: 153 TRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLD---RMSVSPDVVTYNT 209

Query: 366 LLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
           +L ++C SG+     +++  +   +   D++ Y  L+   C+     QA+KL + M D+G
Sbjct: 210 ILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRG 269

Query: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI 482
            TPD  ++  L+ G+C   ++DEAI     +  +    N   H  I+  +   GR   A 
Sbjct: 270 CTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAE 329

Query: 483 QLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
           +L    + + +   VV++ + I  L   G    A  +  +M      PN+ +Y  +L  F
Sbjct: 330 KLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGF 389

Query: 543 CKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           CKE+ +      L+ ++      D  T   +   + K      AV  L ++ + G  P
Sbjct: 390 CKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSP 447



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 60/268 (22%), Positives = 122/268 (45%), Gaps = 4/268 (1%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           TGR+     ++ ++ R G      TF + +    R  + G  ++  ++M + G  PN+ +
Sbjct: 322 TGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLS 381

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N ++    K  ++D  I+ L+        P+ +++N  L  LCK   V +  +++  + 
Sbjct: 382 YNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLS 441

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
            KG  P +  +  +++   K G+  +A +LL  M           ++ L+ G  R  ++D
Sbjct: 442 SKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVD 501

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A   + +  + G  PN VT+ S++ G  + +    A  FL  + + G  P    + +LI
Sbjct: 502 EAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILI 561

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDS 360
           + L+  G   +AL++ + L    L+  S
Sbjct: 562 EGLAYEGMAKEALELLNELCNKGLMKRS 589



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/209 (22%), Positives = 86/209 (41%), Gaps = 3/209 (1%)

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           V  N  L    + G   +  K    M+  G  PD      L+RG C   K  +A  + + 
Sbjct: 103 VESNNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEV 162

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           +  +    +   +  ++    +AG  + A+ +  R  V     DVV+Y   +R L + G+
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSP---DVVTYNTILRSLCDSGK 219

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
            ++A  +  +M      P+  TY +++ + C++  +    +LL ++ D     D  T   
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNV 279

Query: 573 LTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           L   I K      A+  L +M + G  P+
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPN 308


>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
          Length = 825

 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 124/543 (22%), Positives = 232/543 (42%), Gaps = 16/543 (2%)

Query: 75  KQRDYFHDVQSFDHMISVVTR--------LTGRFETVRGIVGELARVGCVIKAQTFLLFL 126
           K  D F+ ++    M +VVT          T   +    ++ ++   G      T+   +
Sbjct: 242 KAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLI 301

Query: 127 RIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL---- 182
             Y    M+   +  F EM      P+    N  M  L K GR+     +     L    
Sbjct: 302 HGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPK 361

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+ +S+   L        ++ + ++  +MV +G  P+  +F  L+N + ++G + ++  +
Sbjct: 362 PDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLM 421

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
              M   G +  +  ++ +I  F RL RLD A   +  M+  G  P+   Y+ LI+G   
Sbjct: 422 FEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCN 481

Query: 303 AKMFSIAFSFLDMLESEGHAPDLV-FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
            +    A   +  + S+G  P  + F   +I+ L K G   +  DV D ++     P+  
Sbjct: 482 RRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLI 541

Query: 362 TFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           TF SL+   CL G       L+  +E   VE D+  YN L+  +CK G  + A+ L+  M
Sbjct: 542 TFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDM 601

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
           L K  T  + S+  +L GL  AR+   A  ++  ++ +  AV+ H +  ++  L      
Sbjct: 602 LHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCT 661

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            +A  L  +        D++++ + IR + + GR +EA  L++ +    + P   TYRVM
Sbjct: 662 DEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVM 721

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGL 598
           + +  KE + +    L   +  +    D      + + +      + A N L ++   G+
Sbjct: 722 ITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGI 781

Query: 599 IPD 601
           +P+
Sbjct: 782 LPE 784



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 114/549 (20%), Positives = 217/549 (39%), Gaps = 81/549 (14%)

Query: 133 EMYGMVLEAFDEMGRFG---FTPNTFARNIVMDVLFKIGRVDLGIKV----LKETQLPNF 185
           ++  + +E F  M R       P  +  NI+++   +  R DLG+ V    L+    P+ 
Sbjct: 165 DVPALAVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDV 224

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGL 245
            S+N  +    K  +V    D+   M  +G  PNV  +  L+N  CK   + +A ++L  
Sbjct: 225 FSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQ 284

Query: 246 MITLGTSLSVNAWTVLIDGFR-----------------------------------RLRR 270
           M+  G   +   +  LI G+                                    +  R
Sbjct: 285 MVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGR 344

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           +  A  +++ MV  G  P+V++Y +L+ G+  A   +   +  +++  EG  PD    N 
Sbjct: 345 IKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNT 404

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF-------------- 376
           LI+  +++G  D +L +++ + +  + PD  TF +++S  C  GR               
Sbjct: 405 LINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTG 464

Query: 377 -----SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK---------- 421
                ++   L+ G     DLV    L+S     G P   +K + ++++           
Sbjct: 465 VPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEG 524

Query: 422 ----------GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
                     G  P+  +F  L+ G C    + EA+ +   +       + + +  +VD 
Sbjct: 525 KDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDG 584

Query: 472 LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
             + GR   A+ LFR  + ++  L  VSY + + GL +  RT  A  ++ +M    +  +
Sbjct: 585 YCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVS 644

Query: 532 AYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLV 591
            +TY  +L   C+         LL+ +    ++ D  T   + + +FK      A     
Sbjct: 645 IHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFA 704

Query: 592 EMCNLGLIP 600
            +   GL+P
Sbjct: 705 AISTYGLVP 713



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 50/248 (20%), Positives = 103/248 (41%), Gaps = 8/248 (3%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF----LSFNIALCNLCK 197
            D M   G  P+ +  N ++D   K GR+D  + + ++          +S+NI L  L +
Sbjct: 563 LDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQ 622

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
                  K++   M+  G   ++  +  +L   C+     EA  LL  + ++     +  
Sbjct: 623 ARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILT 682

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           + ++I    ++ R   A  L+  +   G  P ++TY  +I   ++ + F  A +    +E
Sbjct: 683 FNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSME 742

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF- 376
                PD    N +I  L   G    A +    + +  ++P++ T   L+    ++G++ 
Sbjct: 743 KSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYR 802

Query: 377 ---SLLPK 381
               LLP+
Sbjct: 803 EYIKLLPE 810


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 121/530 (22%), Positives = 234/530 (44%), Gaps = 43/530 (8%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           +V + + M++ + +  G+F+ V+  + E+   G      T+   +  Y R    G++ EA
Sbjct: 117 NVYTLNIMVNALCK-DGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCR---EGLLEEA 172

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDV 201
           F+ M       N+ A              D G+K       P+  ++N  +  LCK    
Sbjct: 173 FEIM-------NSMA--------------DKGLK-------PSLFTYNAIINGLCKKGRY 204

Query: 202 SNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVL 261
           +  K ++  M+  G  P+   +  LL   C+    +EA ++ G M+  G    + +++ L
Sbjct: 205 ARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSL 264

Query: 262 IDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH 321
           I  F R R LD A   +  M + G  P+ V YT L+ G+        A    D +  +G 
Sbjct: 265 IAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGC 324

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPK 381
             D++ +N +++ L K     DA  ++D ++E   +PD YTF +L+   C  G  +    
Sbjct: 325 VLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALS 384

Query: 382 LVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
           L   +    ++ D+V YN L+  FCK G   +A +L++ M+ +   P++ ++  L+   C
Sbjct: 385 LFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYC 444

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
               + EA  ++  ++             ++     +G   KA +   R I +    D +
Sbjct: 445 SVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHI 504

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           SY   I G +     ++A++  ++M+   + P+  TY V++  FC++  ++  + +L+ +
Sbjct: 505 SYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKM 564

Query: 559 IDARIELDYHTSIRLTKFIFKFHSSSSAVNQLV----EMCNLGLIPDEMW 604
           I+  I  D  T   L       H +   +N+      EM   G  PD+++
Sbjct: 565 IEKGINPDRSTYTAL----INGHVTQDNLNEAFRFHDEMLQRGFAPDDVF 610



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 121/510 (23%), Positives = 219/510 (42%), Gaps = 8/510 (1%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           R E V  +V  +    C      F L +R Y +        EAF  +   G+  +  A N
Sbjct: 29  RVEVVEALVSSMCG-NCGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACN 87

Query: 159 IVMDVLFKIGRVDLGIKVLKETQLP----NFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
            ++  L KI  V+L  +V +E        N  + NI +  LCK     +VK  +  M   
Sbjct: 88  SLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGN 147

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           G Y ++  +  L+  +C+ G + EA++++  M   G   S+  +  +I+G  +  R   A
Sbjct: 148 GIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARA 207

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             +  +M+  G SP+  TY +L+        FS A      +  +G  PDLV  + LI  
Sbjct: 208 KGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAV 267

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---D 391
            S+    D AL  +  + +  LVPD+  +  L+   C +G      K+   +  +    D
Sbjct: 268 FSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLD 327

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
           ++ YN +L+  CK      A KL++ M+++G  PD Y+F  L+ G C    + +A++++ 
Sbjct: 328 VIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFG 387

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
            +   N   +   +  ++D   + G   KA +L+   I  K   + ++Y + I      G
Sbjct: 388 TMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVG 447

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSI 571
              EA+ L+  M    + P   T   ++  +C+  +       L  +I   +  D+ +  
Sbjct: 448 HVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYN 507

Query: 572 RLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            L     +  +   A   + +M   GL+PD
Sbjct: 508 TLINGFVREDNMDKAFLWINKMEKEGLLPD 537



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 80/362 (22%), Positives = 162/362 (44%), Gaps = 46/362 (12%)

Query: 79  YFHDVQSF----DHMISVV-----TRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIY 129
           YF D++ F    D++I  V      R     E ++ I  E+   GCV+    +   L   
Sbjct: 280 YFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALK-IRDEMLEQGCVLDVIAYNTILNGL 338

Query: 130 WRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNF 185
            + +M     + FDEM   G  P+ +    ++    + G +   + +     +    P+ 
Sbjct: 339 CKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDI 398

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGL 245
           +++N  +   CK+ ++    ++   M+ +  +PN   + IL+N +C +G ++EA++L  +
Sbjct: 399 VAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDV 458

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           MI  G   ++     +I G+ R      A     +M+  G +P+ ++Y +LI GF+    
Sbjct: 459 MIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDN 518

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
              AF +++ +E EG  PD++ +NV+++   + G   +A  V   ++E  + PD  T+ +
Sbjct: 519 MDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTA 578

Query: 366 LLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
           L++                G   + +L                N+A + ++ ML +GF P
Sbjct: 579 LIN----------------GHVTQDNL----------------NEAFRFHDEMLQRGFAP 606

Query: 426 DN 427
           D+
Sbjct: 607 DD 608


>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 517

 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 102/397 (25%), Positives = 194/397 (48%), Gaps = 46/397 (11%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLN--CF--------CK 232
           PN ++ NI + + C+L  + +   V+  +++ G+ PN      L+   C         C 
Sbjct: 95  PNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCI 154

Query: 233 MGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVT 292
           +G++ +A  L   MI    +  V  +T+L+DGF +  R+  A  +   M+  G  P VVT
Sbjct: 155 VGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVT 214

Query: 293 YTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
           Y SL+ G+   K  + A S  + +   G +PD+  +++LI+   K+   D+A+++   + 
Sbjct: 215 YNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMH 274

Query: 353 ELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAV 412
             +++P+                                +V Y++L+   CK+G  + A+
Sbjct: 275 HKQIIPN--------------------------------VVTYSSLIDGLCKSGKISYAL 302

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
           KL + M D+G  P+  ++  +L  LC   ++D AI +   +       N + +T ++  L
Sbjct: 303 KLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGL 362

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
            ++G+   A ++F   +V+ + L+V +YTV I+G  + G  +EA  L S+M+     PNA
Sbjct: 363 CQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNA 422

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVI----DARIEL 565
            TY +++LS  K+   +M ++LL ++I    D R+ L
Sbjct: 423 KTYEIIILSLFKKDENEMAEKLLCEMIETNFDGRVAL 459



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 96/391 (24%), Positives = 184/391 (47%), Gaps = 42/391 (10%)

Query: 80  FHDVQSFDHMISVVTRLTGRFETVRGIVGELARV-GCVIKAQTFLLFLRIYWRGEMYGM- 137
           FH+    D  +S+  RL  +  T   I  E  ++ G ++K++ +   L +  + E  G+ 
Sbjct: 37  FHNNNDVDDAVSLFNRLLQQNPTPPNI--EFNKILGSLVKSKHYHTVLYLSQKMEFRGIK 94

Query: 138 --------VLEAFDEMG-------------RFGFTPNTFARNIVMDVLFKIGR------- 169
                   ++ +F ++G             + G+ PNT   N ++  L   G+       
Sbjct: 95  PNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCI 154

Query: 170 -------VDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
                  VDL  K++ E   P+  +F I +   CK   V   K+V+ MM+ +G  P V  
Sbjct: 155 VGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVT 214

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           +  L++ +  + ++ +A  +   M  LG S  + ++++LI+GF +++ +D A  L ++M 
Sbjct: 215 YNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMH 274

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
                PNVVTY+SLI G  ++   S A   +D +   G  P++V ++ ++D L K    D
Sbjct: 275 HKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVD 334

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALL 399
           +A+ +   +    + P+ YT+  L+  +C SG+     K+   L V+    ++  Y  ++
Sbjct: 335 NAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMI 394

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
             FC  G  ++A+ L + M D G  P+  ++
Sbjct: 395 QGFCDKGLFDEALTLLSKMEDNGCIPNAKTY 425



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/431 (22%), Positives = 193/431 (44%), Gaps = 29/431 (6%)

Query: 210 MMVRKGFYP---NVRMFEILLNC-------------FCKMGRIAEAYQLLGLMITLGTSL 253
           M++R GF P       F+ L+N              F     + +A  L   ++    + 
Sbjct: 1   MLLRYGFVPVSKKFHSFQFLINTHFNFIPYFSTSTTFHNNNDVDDAVSLFNRLLQQNPTP 60

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
               +  ++    + +      YL +KM   G  PN+V    LI  F +      AFS L
Sbjct: 61  PNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVL 120

Query: 314 DMLESEGHAPDLVFHNVLID--CLSK--------MGSYDDALDVYDGLLELKLVPDSYTF 363
             +   G+ P+ +  N LI   CL+         +G   DA+D+++ ++   + PD YTF
Sbjct: 121 TKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTF 180

Query: 364 CSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
             L+   C  GR      ++  + ++     +V YN+L+  +      N+A  ++NTM  
Sbjct: 181 TILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQ 240

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
            G +PD  S+  L+ G C  + +DEA+ + + +       N   +++++D L ++G+   
Sbjct: 241 LGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISY 300

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
           A++L         P ++V+Y+  +  L +  + + A  L +QMK+  + PN YTY +++ 
Sbjct: 301 ALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIK 360

Query: 541 SFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
             C+   ++  +++ +D++     L+ +T   + +          A+  L +M + G IP
Sbjct: 361 GLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIP 420

Query: 601 DEMWRKLGLLS 611
           +    ++ +LS
Sbjct: 421 NAKTYEIIILS 431



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 48/220 (21%), Positives = 92/220 (41%), Gaps = 5/220 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D+QS+  +I+   ++    E +  ++ E+     +    T+   +    +       L+ 
Sbjct: 246 DIQSYSILINGFCKIKMMDEAME-LLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKL 304

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
            DEM   G  PN    + ++D L K  +VD  I +L + +     PN  ++ I +  LC+
Sbjct: 305 VDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQ 364

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              + + + V   ++ KG   NV  + +++  FC  G   EA  LL  M   G   +   
Sbjct: 365 SGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKT 424

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLI 297
           + ++I    +    +MA  L  +M++      V     LI
Sbjct: 425 YEIIILSLFKKDENEMAEKLLCEMIETNFDGRVALTNDLI 464


>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
 gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
          Length = 532

 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 100/389 (25%), Positives = 183/389 (47%), Gaps = 19/389 (4%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG--FYPNVRMFEILLNCFCKMGRIAEAY 240
           P+  S++  L  LC         ++I MM   G    P+V  +  +++ F K G + +AY
Sbjct: 82  PDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGDVGKAY 141

Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
            L   M+  G   +V     +IDG  +++ +D A  + ++M+     PN  TY SLI G+
Sbjct: 142 TLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGY 201

Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
           + +  ++ A   L  +  +G  P++V +N+LIDCL K G + +A ++++ +++    PD+
Sbjct: 202 LSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDA 261

Query: 361 YTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLS----------YFCKAGFPNQ 410
            T+ SLL      G    +  +        DL+V N + S           +CK G  ++
Sbjct: 262 TTYGSLLHGYATEGNLVEMNNV-------KDLMVQNGMRSNHHTFSIEIYAYCKCGRLDE 314

Query: 411 AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
           A   +  M   GF PD  ++  ++ GLC   ++D+A++ +  ++ +  + N    T ++ 
Sbjct: 315 ASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIH 374

Query: 471 RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
                G+  KA +LF   +    P DV  +T  I  L + G+  EA  L+  M      P
Sbjct: 375 GFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKP 434

Query: 531 NAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           N  +Y  M+  +     +  V +LL D++
Sbjct: 435 NVVSYNTMIHGYFIAGEVGEVMKLLDDML 463



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 103/425 (24%), Positives = 195/425 (45%), Gaps = 6/425 (1%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+  +F I +   C    ++     +G +++ G   +   F  LL   C   R ++A  +
Sbjct: 11  PDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAMNI 70

Query: 243 -LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG--CSPNVVTYTSLIKG 299
            L  M  LG +  V +++ L+ G    ++ + A  L   M ++G  C P+VV+Y+++I G
Sbjct: 71  VLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHG 130

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
           F +      A++    +   G  P++V  N +ID L K+ + D A  V   +++  ++P+
Sbjct: 131 FFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPN 190

Query: 360 SYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYN 416
             T+ SL+     SG+++   +++  +  +    ++V YN L+   CK+GF  +A +++N
Sbjct: 191 CTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFN 250

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
           +M+  G  PD  ++  LL G      + E  NV   +V N    N H  +  +    + G
Sbjct: 251 SMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCG 310

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
           R  +A   F +     +  D+V+YT  I GL + GR ++A   + QM    + PN  T+ 
Sbjct: 311 RLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFT 370

Query: 537 VMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNL 596
            ++  F      +  + L  +++D  I  D      +   +FK    + A      M   
Sbjct: 371 TLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRA 430

Query: 597 GLIPD 601
           G  P+
Sbjct: 431 GAKPN 435



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 96/412 (23%), Positives = 176/412 (42%), Gaps = 25/412 (6%)

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIA 191
           G     F +M   G  PN    N V+D L K+  +D    VL+    E  +PN  ++N  
Sbjct: 138 GKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSL 197

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           +         +    ++  M R G  PNV  + +L++C CK G  AEA ++   MI  G 
Sbjct: 198 IHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGP 257

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME-AKMFSIAF 310
                 +  L+ G+     L     + + MVQNG   N  T++  I  + +  ++   + 
Sbjct: 258 KPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASL 317

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
           +F+ M +  G  PD+V +  +ID L K+G  DDA+  +  +++  L P+  TF +L+   
Sbjct: 318 TFIKM-QQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGF 376

Query: 371 CLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
            + G++    +L   +    +  D+ ++ A++    K G   +A KL++ M   G  P+ 
Sbjct: 377 SMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNV 436

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
            S+  ++ G   A ++ E + +   +++      A     ++D ++  G           
Sbjct: 437 VSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMG----------- 485

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
                   DV +    I    E GR E+   L+ +M   A   +  T  + L
Sbjct: 486 -----LKPDVDTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITENIKL 532



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/322 (21%), Positives = 132/322 (40%), Gaps = 43/322 (13%)

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---- 377
           APD+    +LI C    G  +        +++  L  D+  F  LL T+C   R S    
Sbjct: 10  APDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAMN 69

Query: 378 ----LLPKLVC---------------------------------GLEVEADLVVYNALLS 400
                +P+L C                                 G     D+V Y+ ++ 
Sbjct: 70  IVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIH 129

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
            F K G   +A  L+  MLD G  P+  +   ++ GLC  + +D+A  V Q ++  +   
Sbjct: 130 GFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMP 189

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
           N   + +++   + +G+  +A+++ +    +    +VV+Y + I  L + G   EA  ++
Sbjct: 190 NCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIF 249

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT-SIRLTKFIFK 579
           + M      P+A TY  +L  +  E N+  +  +   ++   +  ++HT SI +  +  K
Sbjct: 250 NSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYC-K 308

Query: 580 FHSSSSAVNQLVEMCNLGLIPD 601
                 A    ++M  LG +PD
Sbjct: 309 CGRLDEASLTFIKMQQLGFMPD 330



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 96/221 (43%), Gaps = 9/221 (4%)

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
           +V  D+  +  L+S  C AG  N        ++  G   D  +F  LLR LC  ++  +A
Sbjct: 8   KVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDA 67

Query: 447 INVYQGIVMNNPAV----NAHVHTAIVDRLIEAGRCHKAIQLFRRAIV--EKYPLDVVSY 500
           +N+   ++   P +    +   ++ ++  L    +C +A +L        +  P DVVSY
Sbjct: 68  MNI---VLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSY 124

Query: 501 TVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
           +  I G  + G   +AY L+ +M    +PPN  T   ++   CK + +   + +LQ +ID
Sbjct: 125 STVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMID 184

Query: 561 ARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
             I  +  T   L          + AV  L EM   G  P+
Sbjct: 185 EHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPN 225


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 134/583 (22%), Positives = 242/583 (41%), Gaps = 63/583 (10%)

Query: 51  HIVHSTLLNCPSDLIALSFFIWCAKQR---DYFH-------DVQSFDHMISVVTRLTG-- 98
           H +     N    LI+   +  C+K +   D+ H       D +S+   + ++ RL    
Sbjct: 84  HFIEQVSPNLTPALISNVLYNLCSKPQLVSDFIHHLHPHCLDTKSYCLAVVLLARLPSPK 143

Query: 99  ------------RFETVRGIVGEL--ARVGCVIKAQ-TFLLFLRIYWRGEMYGMVLEAFD 143
                       R  T R +  EL  +R    +K+   F L +R+           + F 
Sbjct: 144 LALQLLKQVMGTRIATNRELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFY 203

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLG----IKVLKETQLPNFLSFNIALCNLCKLN 199
            M   G  P     N ++ +  K+ R+++      ++ +        +FNI +  LCK  
Sbjct: 204 MMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEG 263

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
            +   ++ IG M   GF PNV  +  +++ +   G I  A ++L  M   G       + 
Sbjct: 264 KLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYG 323

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
            LI G  +  RL+ A  L++KMV+ G  PN VTY +LI G+        AFS+ D +  +
Sbjct: 324 SLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKK 383

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
           G  P +  +N+L+  L   G   +A D+   + +  ++PD+ T                 
Sbjct: 384 GIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAIT----------------- 426

Query: 380 PKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
                          YN L++ + + G   +A  L+N ML KG  P + ++  L+  L  
Sbjct: 427 ---------------YNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSR 471

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
             ++ EA ++++ I+    + +  +  A+VD     G   +A  L +    +  P D V+
Sbjct: 472 RNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVT 531

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           +   ++G    G+ EEA +L  +MK   + P+  +Y  ++  + +  +IK   R+  +++
Sbjct: 532 FNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEML 591

Query: 560 DARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
                    T   L K + K      A   L EM N G+ PD+
Sbjct: 592 SIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDD 634



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/304 (24%), Positives = 145/304 (47%), Gaps = 9/304 (2%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCK 197
           FD+M   G  PN    N ++D     G ++       +++K+  +P+  ++N+ +  L  
Sbjct: 342 FDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFM 401

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              +    D+I  M +KG  P+   + IL+N + + G   +A+ L   M++ G   +   
Sbjct: 402 EGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVT 461

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T LI    R  R+  A  L+EK++  G SP+V+ + +++ G         AF  L  ++
Sbjct: 462 YTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMD 521

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-- 375
            +   PD V  N L+    + G  ++A  + D +    + PD  ++ +L+S     G   
Sbjct: 522 RKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIK 581

Query: 376 --FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
             F +  +++  +     L+ YNAL+   CK    + A +L   M++KG +PD+ +++ L
Sbjct: 582 DAFRVRDEML-SIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSL 640

Query: 434 LRGL 437
           + G+
Sbjct: 641 IEGM 644



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 74/325 (22%), Positives = 135/325 (41%), Gaps = 40/325 (12%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D  ++  +IS + +  GR E   G+  ++  +G V  A T+   +  Y            
Sbjct: 318 DSYTYGSLISGMCK-EGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSY 376

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIAL----- 192
            DEM + G  P+    N+++  LF  GR+     ++KE +    +P+ +++NI +     
Sbjct: 377 RDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSR 436

Query: 193 CN------------------------------LCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
           C                               L + N +    D+   ++ +G  P+V M
Sbjct: 437 CGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIM 496

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           F  +++  C  G +  A+ LL  M           +  L+ G  R  +++ A  L ++M 
Sbjct: 497 FNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMK 556

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
           + G  P+ ++Y +LI G+        AF   D + S G  P L+ +N LI CL K    D
Sbjct: 557 RRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGD 616

Query: 343 DALDVYDGLLELKLVPDSYTFCSLL 367
            A ++   ++   + PD  T+ SL+
Sbjct: 617 LAEELLKEMVNKGISPDDSTYLSLI 641


>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
 gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
 gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
 gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 137/548 (25%), Positives = 245/548 (44%), Gaps = 50/548 (9%)

Query: 116 VIKAQTFLLF------LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
           +++  TF+ F      L  Y +    G        M + GF  N +  NI++  L +   
Sbjct: 98  MLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLE 157

Query: 170 VDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEI 225
               + +L+E +    +P+  S+N  +   C+  ++    ++   M   G   ++  + I
Sbjct: 158 CGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGI 217

Query: 226 LLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
           L++ FCK G++ EA   L  M  +G    +  +T LI GF     LD    L++++++ G
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277

Query: 286 CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL 345
            SP  +TY +LI+GF +      A    + +   G  P++  +  LID L  +G   +AL
Sbjct: 278 DSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEAL 337

Query: 346 DVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYF 402
            + + ++E    P++ T+  +++ +C  G  +    + +L+       D + YN LL   
Sbjct: 338 QLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGL 397

Query: 403 CKAGFPNQAVKLYNTML-DKGFT-PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
           C  G  ++A KL   ML D  +T PD  S+  L+ GLC   ++ +A+++Y  +V    A 
Sbjct: 398 CAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAG 457

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
           +      +++  ++AG  +KA++L+++    K   +  +YT  I G  + G    A  L 
Sbjct: 458 DRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLL 517

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ---------DVIDARIELDYHTSI 571
            +M+   + P+ + Y  +L S CKE ++    RL +         DV+   I +D     
Sbjct: 518 CKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGS--- 574

Query: 572 RLTKFIFKFHSSSSAVNQLVEMCNLGLIPD--------EMWRKLGLLSDETMTPVSLFD- 622
                  K     SA + LV M   GL PD          + KLG L +     +S FD 
Sbjct: 575 ------LKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDE----AISFFDK 624

Query: 623 ----GFVP 626
               GF P
Sbjct: 625 MVDSGFEP 632



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 113/506 (22%), Positives = 223/506 (44%), Gaps = 9/506 (1%)

Query: 105 GIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVL 164
           G++  + + G         + L+   R    G  +    EM R    P+ F+ N V+   
Sbjct: 128 GVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGF 187

Query: 165 FKIGRVDLGIKVLKETQLP----NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV 220
            +   ++  +++  E +      + +++ I +   CK   +      +  M   G   ++
Sbjct: 188 CEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADL 247

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
            ++  L+  FC  G +     L   ++  G S     +  LI GF +L +L  A  ++E 
Sbjct: 248 VVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEF 307

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           M++ G  PNV TYT LI G         A   L+++  +   P+ V +N++I+ L K G 
Sbjct: 308 MIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGL 367

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL-----EVEADLVVY 395
             DA+++ + + + +  PD+ T+  LL  +C  G      KL+  +       + D++ Y
Sbjct: 368 VADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISY 427

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
           NAL+   CK    +QA+ +Y+ +++K    D  +   LL     A  +++A+ +++ I  
Sbjct: 428 NALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISD 487

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
           +    N+  +TA++D   + G  + A  L  +  V +    V  Y   +  L + G  ++
Sbjct: 488 SKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQ 547

Query: 516 AYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTK 575
           A+ L+ +M+     P+  ++ +M+    K  +IK  + LL  +  A +  D  T  +L  
Sbjct: 548 AWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLIN 607

Query: 576 FIFKFHSSSSAVNQLVEMCNLGLIPD 601
              K      A++   +M + G  PD
Sbjct: 608 RFLKLGYLDEAISFFDKMVDSGFEPD 633



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 113/483 (23%), Positives = 218/483 (45%), Gaps = 17/483 (3%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWR-GEM-YGMVLEAFDEMGRFGFTPNT 154
            G+ +   G + E+  +G       +   +R +   GE+  G  L  FDE+   G +P  
Sbjct: 225 AGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKAL--FDEVLERGDSPCA 282

Query: 155 FARNIVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGM 210
              N ++    K+G++    ++    ++    PN  ++   +  LC +        ++ +
Sbjct: 283 ITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNL 342

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M+ K   PN   + I++N  CK G +A+A +++ LM    T      + +L+ G      
Sbjct: 343 MIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGD 402

Query: 271 LDMAGYLWEKMVQNGC--SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH 328
           LD A  L   M+++     P+V++Y +LI G  +      A    D+L  +  A D V  
Sbjct: 403 LDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTT 462

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL-- 386
           N+L++   K G  + A++++  + + K+V +S T+ +++   C +G  ++   L+C +  
Sbjct: 463 NILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRV 522

Query: 387 -EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
            E++  +  YN LLS  CK G  +QA +L+  M      PD  SF  ++ G   A  I  
Sbjct: 523 SELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKS 582

Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
           A ++  G+     + +   ++ +++R ++ G   +AI  F + +   +  D       ++
Sbjct: 583 AESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLK 642

Query: 506 GLLEGGRTEEAYILYSQM--KHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
             +  G T++   L  ++  K I V     T  VM        N+ + KRLL+ V D + 
Sbjct: 643 YCISQGETDKLTELVKKLVDKDI-VLDKELTCTVMDYMCNSSANMDLAKRLLR-VTDDKE 700

Query: 564 ELD 566
           E D
Sbjct: 701 ERD 703



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 85/395 (21%), Positives = 172/395 (43%), Gaps = 53/395 (13%)

Query: 211 MVRKGFYPNVRMFEILLNCFCKMG------------RIAEAYQLLGLMITLGTSLSVNAW 258
           +VRK   P  R++  L+N F +              ++  A  +    +  G+SL+  A 
Sbjct: 19  VVRKLLNP--RVYSKLVNAFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSGSSLAF-AG 75

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
             L+    R R  ++A   + KM++     N V+ + L++ +++ +    AF  L ++  
Sbjct: 76  NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF--------------- 363
            G A ++  HN+L+  L +      A+ +   +    L+PD +++               
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195

Query: 364 ------------CS--------LLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLS 400
                       CS        L+   C +G+       +  ++   +EADLVVY +L+ 
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
            FC  G  ++   L++ +L++G +P   ++  L+RG C   ++ EA  +++ ++      
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP 315

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
           N + +T ++D L   G+  +A+QL    I +    + V+Y + I  L + G   +A  + 
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIV 375

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
             MK     P+  TY ++L   C + ++    +LL
Sbjct: 376 ELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLL 410


>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 101/375 (26%), Positives = 172/375 (45%), Gaps = 19/375 (5%)

Query: 184 NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
           N +SF   LC   K      V   I  M+  GF P+   +  ++   C   R+  A+ L 
Sbjct: 456 NVVSFARCLCGFGKFEKAYKV---IHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLF 512

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
             M   G    V  +T+LID F +   +  A    ++MV++GC P VVTYT+LI  +++A
Sbjct: 513 KEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKA 572

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
           K  S+A    +++ ++G  P+++ +  LID   K G+ + A  +Y  +     +PD   +
Sbjct: 573 KKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMY 632

Query: 364 CSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
             + + V                  + ++V Y AL+   CKA     A  L  TM   G 
Sbjct: 633 FKIKNNVA----------------EKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGC 676

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
            P+   +  L+ G C A K+DEA  V+  +V      N + +++++DRL +  R    ++
Sbjct: 677 EPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLK 736

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           +  + +      ++V YT  I GL +  +T+EAY L   M+     PN  TY  M+  F 
Sbjct: 737 VLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFG 796

Query: 544 KERNIKMVKRLLQDV 558
           K   +     L +++
Sbjct: 797 KAGKVDKCLELFREM 811



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/485 (21%), Positives = 216/485 (44%), Gaps = 33/485 (6%)

Query: 60  CPSDLIALSFFIWCA-KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIK 118
           C +  +  +FF++   K      DV ++  +I   ++  G  +     + E+ R GC   
Sbjct: 500 CNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSK-AGIIKQAHNWLDEMVRDGCEPT 558

Query: 119 AQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK 178
             T+   +  Y + +   +  E F+ M   G  PN      ++D   K G ++   ++  
Sbjct: 559 VVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYA 618

Query: 179 E--------------------TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYP 218
                                 + PN +++   +  LCK + V + +D++  M   G  P
Sbjct: 619 RMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEP 678

Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
           N  +++ L++ FCK  ++ EA ++   M+  G + +V  ++ LID   + +RLD+   + 
Sbjct: 679 NTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVL 738

Query: 279 EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
            KM++N C+PN+V YT +I G  +      A+  + M+E +G  P++V +  +ID   K 
Sbjct: 739 SKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKA 798

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNAL 398
           G  D  L+++  +      P+  T+  L++  C +G       L+     E     +   
Sbjct: 799 GKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALL----EEMKQTYWPKH 854

Query: 399 LSYFCKA--GFPNQ---AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
           +S +CK   G+  +   ++ L   +   G  P    +  L+     A +++ A+ +++ +
Sbjct: 855 VSSYCKVIEGYKREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEV 914

Query: 454 VMNNPAVNA--HVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
           +  + ++ A  +++T+++     A +   A +LF   I +    D+ ++   + GL+   
Sbjct: 915 ISASMSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVR 974

Query: 512 RTEEA 516
           R EEA
Sbjct: 975 RWEEA 979



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 119/546 (21%), Positives = 224/546 (41%), Gaps = 49/546 (8%)

Query: 48  LAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETV---- 103
           L P +V   L    S  + + FF+W  +Q  Y H    +  ++ V  R  G ++ V    
Sbjct: 136 LNPDLVVEILSFLKSPELCVKFFLWAGRQIGYDHTPAVYIALLDVFER--GSYDRVPEEF 193

Query: 104 -RGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMD 162
            R I G+   V      +   + +R   R  ++ + LE    +  FG+ P     N ++ 
Sbjct: 194 LREIRGDDKEV----LGKLLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQ 249

Query: 163 VLFKIGRVDLGIKVLKETQ-----LPNFL--SFNIALCNLCKLNDVSNVKDVIGMMVRKG 215
           V  +  ++D    V +E       +  F    F  ALC + K       ++ + ++ ++ 
Sbjct: 250 VFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKW------REALSLIEKED 303

Query: 216 FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAG 275
           F PN  ++  +++  C+     EA   L  M +     +V  + +L+ G    ++L    
Sbjct: 304 FVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCK 363

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
            +   M+  GC P+   + SL+  + ++  FS A+  L  +E     P  V +N+LI  +
Sbjct: 364 RILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSI 423

Query: 336 SKMG------SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV---CGL 386
              G      +++ A   Y+ +L    V +     S    +C  G+F    K++    G 
Sbjct: 424 CSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGN 483

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
               D   Y+ ++ + C A     A  L+  M   G  PD Y++  L+     A  I +A
Sbjct: 484 GFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQA 543

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
            N    +V +        +T ++   ++A +   A +LF   I +    +V++YT  I G
Sbjct: 544 HNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDG 603

Query: 507 LLEGGRTEEAYILYSQMK----------------HIAVPPNAYTYRVMLLSFCKERNIKM 550
             + G  E+A  +Y++M+                ++A  PN  TY  ++   CK   +K 
Sbjct: 604 YCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKD 663

Query: 551 VKRLLQ 556
            + LL+
Sbjct: 664 ARDLLE 669



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 125/515 (24%), Positives = 195/515 (37%), Gaps = 93/515 (18%)

Query: 134 MYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALC 193
           +Y  +L+ F E G +   P  F R I  D    +G++   + VL      N L +N+AL 
Sbjct: 173 VYIALLDVF-ERGSYDRVPEEFLREIRGDDKEVLGKL---LNVLIRKCCRNGL-WNVALE 227

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
            L +L D              G+ P    +  L+  F +  ++  A  +   M  LG S+
Sbjct: 228 ELGRLKDF-------------GYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSM 274

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
                        ++ +   A  L EK       PN + Y  +I G  EA  F  A  FL
Sbjct: 275 DEFTLGFFAQALCKVGKWREALSLIEK---EDFVPNTILYNKMISGLCEASFFEEAMDFL 331

Query: 314 DMLESEGHAPDLVFHNVLI-DCLSK--MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
           + + S    P++  + +L+  CL+K  +G     L +   ++     P    F SL+   
Sbjct: 332 NRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSM---MIAEGCYPSYTIFNSLVHAY 388

Query: 371 CLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAG-FPNQ-----AVKLYNTMLDK 421
           C S  FS   KL+  +E    +   VVYN L+   C  G  P       A K YN ML  
Sbjct: 389 CKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSA 448

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
           G   +  + V   R LCG  K ++A  V   ++ N                         
Sbjct: 449 GTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNG------------------------ 484

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
                      +  D  +Y+  I  L    R E A+ L+ +MK   V P+ YTY +++  
Sbjct: 485 -----------FVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDC 533

Query: 542 FCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSS--SAVNQLVE-MCNLGL 598
           F K   IK     L +++    E    T +  T  I  +  +   S  N+L E M   G 
Sbjct: 534 FSKAGIIKQAHNWLDEMVRDGCE---PTVVTYTTLIHAYLKAKKVSVANELFELMIAKGC 590

Query: 599 IPDEMWRKLGLLSDETMTPVSLFDGFVPCERRAGN 633
            P+             +T  +L DG+     ++GN
Sbjct: 591 FPN------------VITYTALIDGYC----KSGN 609



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/294 (23%), Positives = 115/294 (39%), Gaps = 80/294 (27%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE-------------TQL---- 182
           E F +M   G+ PN +  + ++D LFK  R+DL +KVL +             T++    
Sbjct: 701 EVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGL 760

Query: 183 ----------------------PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV 220
                                 PN +++   +    K   V    ++   M  KG  PN 
Sbjct: 761 SKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNF 820

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
             + +L+N  C  G + EAY LL  M        V+++  +I+G++R   L +   L E+
Sbjct: 821 VTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLG--LLEE 878

Query: 281 MVQNGCSPNVVTY-------------------------------------TSLIKGFMEA 303
           + +NG +P ++ Y                                     TSLI  F  A
Sbjct: 879 VEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMSMTAKKNLYTSLIYSFSYA 938

Query: 304 KMFSIAFS-FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
                AF  F DM+  +G  PDL     L+  L ++  +++AL + D L ++ +
Sbjct: 939 SKIDHAFELFYDMIR-DGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSLCQMDI 991


>gi|224138176|ref|XP_002326537.1| predicted protein [Populus trichocarpa]
 gi|222833859|gb|EEE72336.1| predicted protein [Populus trichocarpa]
          Length = 826

 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 107/413 (25%), Positives = 194/413 (46%), Gaps = 8/413 (1%)

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFL----SFNIALCNLCKL 198
           D  G+ G  PN    N ++D  +K G V+    + KE ++  FL    ++ I +  LCK 
Sbjct: 230 DRWGK-GCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKK 288

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
            +   V  ++  M  +G   NV+++  +++   K G   E  + L  +   G    +  +
Sbjct: 289 CNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTY 348

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
             LI G  R  ++  A  L E  ++ G SPN ++YT LI  + +      AF     +  
Sbjct: 349 NTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTE 408

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL 378
           +GH  DLV +  L+  L   G  D AL V D ++E  ++PD+  +  L++ +C  GR S 
Sbjct: 409 KGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSA 468

Query: 379 LPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
              L+  +    +  D  V   L+  F + G  ++A KL+   + KG  P    +  +++
Sbjct: 469 AKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIK 528

Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
           G C    +++A+   Q +   + + +   ++ I+D  ++    H A++LF + + +K   
Sbjct: 529 GYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKP 588

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
           +VV+YT  I G    G +  A   + +M+   + PN  TY +++  FCKE  I
Sbjct: 589 NVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKI 641



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 121/551 (21%), Positives = 228/551 (41%), Gaps = 19/551 (3%)

Query: 65  IALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQT--- 121
           + L  F W +K+ D+   +  F    S + +L  R      +   L  + C   A T   
Sbjct: 79  LGLKLFEWASKRSDFNDLLDGFS--CSSLLKLLARCRVFVEVENLLETMKCKDLAPTREA 136

Query: 122 FLLFLRIYWRGEMYGMVLE----AFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL 177
               +  Y    +    LE    A+D      + P+  A N +++ L +  +V++  KV 
Sbjct: 137 LSFVVGAYVDSGLVNRALELYHIAYD---IHNYLPDVIACNALLNALIQQKKVEIARKVY 193

Query: 178 KETQLPNFLSFNIALC----NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKM 233
           +E    +    N ++C     LCK   V   + +I     KG  PN+  +  L++ + K 
Sbjct: 194 EEMVKRDGCWDNYSVCIMVRGLCKERKVEEGRKLINDRWGKGCIPNIVFYNTLVDGYWKR 253

Query: 234 GRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTY 293
           G +  A  L   +   G   +   + ++I+G  +         L  +M + G   NV  Y
Sbjct: 254 GDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVY 313

Query: 294 TSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE 353
            S++   ++          L  +   G  PD+  +N LI    + G   +A ++ +  ++
Sbjct: 314 NSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEELLEHAIK 373

Query: 354 LKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQ 410
             L P+  ++  L+   C  G+      L  G+  +    DLV Y AL+     AG  + 
Sbjct: 374 RGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDV 433

Query: 411 AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
           A+ + + M+++G  PD   +  L+ GLC   ++  A  +   ++  N +++A V   +VD
Sbjct: 434 ALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVD 493

Query: 471 RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
             I  G+  +A +LF   I +     VV Y   I+G  + G   +A     +MK     P
Sbjct: 494 GFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSP 553

Query: 531 NAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQL 590
           + +TY  ++  + K+ ++    +L   ++  + + +  T   L     +   SS A    
Sbjct: 554 DEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTF 613

Query: 591 VEMCNLGLIPD 601
            EM + GL P+
Sbjct: 614 EEMRSSGLKPN 624



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 116/522 (22%), Positives = 223/522 (42%), Gaps = 34/522 (6%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           K+R    +VQ ++ ++    +   + E V   +  +   GC     T+   +    R   
Sbjct: 302 KERGVDVNVQVYNSIVDAQIKHGCKIE-VGKTLRWITENGCEPDITTYNTLISGSCRDGK 360

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNI 190
                E  +   + G +PN  +   ++ V  K G+     DL I + ++    + +++  
Sbjct: 361 VHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGA 420

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +  L    +V     V   MV +G  P+  ++ +L+N  CK GR++ A  LL  M+   
Sbjct: 421 LVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQN 480

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
            SL       L+DGF R  +LD A  L+E  +  G  P VV Y ++IKG+ +  M + A 
Sbjct: 481 LSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDAL 540

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
           + +  ++   H+PD   ++ +ID   K     +AL ++  +++ K  P+  T+ SL++  
Sbjct: 541 TCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGF 600

Query: 371 CLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           C +G  S   K    +    ++ ++V Y  L+  FCK G  ++A   +  ML     P++
Sbjct: 601 CRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFELMLLNRCIPND 660

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL--F 485
            +F  L+ GL                  NN A      TA+ ++  E+     ++ +  F
Sbjct: 661 VTFNYLINGL-----------------TNNLA------TAVSNKANESLEIKASLMMDFF 697

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
           R  I + +   V +Y   +  L        A  L  +M    + P+  ++  ++   C E
Sbjct: 698 RTMISDGWEQRVAAYNSVLICLCHHKMVNAALQLRDKMTGKGIFPDPVSFAALVYGLCLE 757

Query: 546 RNIKMVKRLLQ-DVIDARIELDYHTSIRLTKFIFKFHSSSSA 586
              K  K  +   + +  +++    S +L  F+ K  +S ++
Sbjct: 758 GRSKEWKNTISCKLNEWELQIAVKYSQKLNPFLPKGLTSEAS 799


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 113/458 (24%), Positives = 209/458 (45%), Gaps = 9/458 (1%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDV 207
           PN +  N ++      G+    ++V KE +    LP+ ++ ++ + +LCK   +   +DV
Sbjct: 290 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 349

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
              M  KG  P+V  + I+LN +   G + +   L  LM+  G +     + VLI  +  
Sbjct: 350 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYAN 409

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
              LD A  ++ +M  +G  P+VVTY ++I           A    + +  +G APD   
Sbjct: 410 CGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 469

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF---SLLPKLVC 384
           +N LI      GS   A ++   ++   +  D   F S+++ +C  GR      +  L  
Sbjct: 470 YNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTV 529

Query: 385 GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
            + +  D VVYN L+  +C  G   +A+++++ M+  G  P+   +  L+ G C   +ID
Sbjct: 530 NVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRID 589

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
           E +++++ ++      +  +++ I+D L EAGR   A   F         +D+ +Y + +
Sbjct: 590 EGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVL 649

Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
           RGL +    +EA  L+ +++ + V  N  T   M+    + R ++  K L   +  +R+ 
Sbjct: 650 RGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLV 709

Query: 565 LDYHT-SIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
               T SI +T  I K      A +    M N G  P+
Sbjct: 710 PSVVTYSIMITNLI-KEGLVEEAEDMFSSMQNAGCEPN 746



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 112/495 (22%), Positives = 210/495 (42%), Gaps = 45/495 (9%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALC 193
            +  F EM R    P+    +++M  L K G++     V      + Q P+  S+NI L 
Sbjct: 311 AVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLN 370

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
                  + ++ D+  +M+  G  P+   F +L+  +   G + +A  +   M   G   
Sbjct: 371 GYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP 430

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
            V  +  +I    R+ ++D A   + +M+  G +P+   Y  LI+GF        A   +
Sbjct: 431 DVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELI 490

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
             + + G   D+VF + +I+ L K+G   DA +++D  + + L PD+  +  L+   CL 
Sbjct: 491 SEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLV 550

Query: 374 GRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN--Y 428
           G+     ++   +    +E ++V Y  L++ +CK G  ++ + L+  ML +G  P    Y
Sbjct: 551 GKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILY 610

Query: 429 SFV--GL-------------------------------LRGLCGARKIDEAINVYQGIVM 455
           S +  GL                               LRGL   R  DEAI +++ +  
Sbjct: 611 SIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRA 670

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
            N  +N      ++D + +  R  +A  LF      +    VV+Y++ I  L++ G  EE
Sbjct: 671 MNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEE 730

Query: 516 AYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTK 575
           A  ++S M++    PN+     ++    K+  I      L  + +    L++ T++ L  
Sbjct: 731 AEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVD 790

Query: 576 FIFKFHSSSSAVNQL 590
               F S  +   Q+
Sbjct: 791 L---FSSKGTCREQI 802



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/478 (21%), Positives = 199/478 (41%), Gaps = 44/478 (9%)

Query: 113 VGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGF--TPNTFARNIVMDVLFKIGRV 170
           +GCV    ++ + L+        G   +    M   G   +PN  A N V+D  FK G V
Sbjct: 179 LGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDV 238

Query: 171 DLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEIL 226
           +    + KE       P+ +++N  +  LCK   +   +  +  MV K   PN   +  L
Sbjct: 239 NKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNL 298

Query: 227 LNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGC 286
           +  +   G+  EA ++   M        V   ++L+    +  ++  A  +++ M   G 
Sbjct: 299 IYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQ 358

Query: 287 SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI----DC-------- 334
           +P+V +Y  ++ G+             D++  +G APD    NVLI    +C        
Sbjct: 359 NPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMI 418

Query: 335 -----------------------LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
                                  L ++G  DDA++ ++ +++  + PD Y +  L+   C
Sbjct: 419 IFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFC 478

Query: 372 LSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
             G      +L+  +    +  D+V ++++++  CK G    A  +++  ++ G  PD  
Sbjct: 479 THGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAV 538

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
            +  L+ G C   K+++A+ V+  +V      N   +  +V+   + GR  + + LFR  
Sbjct: 539 VYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREM 598

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
           +        + Y++ I GL E GRT  A + + +M    +  +  TY ++L    K R
Sbjct: 599 LQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNR 656



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/425 (21%), Positives = 175/425 (41%), Gaps = 41/425 (9%)

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD----- 272
           P    + IL++C  +  R   A    G ++  G  +++     L++GF   +R D     
Sbjct: 112 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 171

Query: 273 -------------------------------MAGYLWEKMVQNG--CSPNVVTYTSLIKG 299
                                           A  L   M + G  CSPNVV Y ++I G
Sbjct: 172 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDG 231

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
           F +    + A      +   G  PDLV +N ++  L K  + D A      ++  +++P+
Sbjct: 232 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 291

Query: 360 SYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYN 416
           ++T+ +L+     +G++    ++   +   +   D+V  + L+   CK G   +A  +++
Sbjct: 292 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 351

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
           TM  KG  PD +S+  +L G      + +  +++  ++ +  A + +    ++      G
Sbjct: 352 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCG 411

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
              KA+ +F          DVV+Y   I  L   G+ ++A   ++QM    V P+ Y Y 
Sbjct: 412 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYN 471

Query: 537 VMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNL 596
            ++  FC   ++   K L+ ++++  + LD      +   + K      A N      N+
Sbjct: 472 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNV 531

Query: 597 GLIPD 601
           GL PD
Sbjct: 532 GLHPD 536



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/321 (23%), Positives = 142/321 (44%), Gaps = 6/321 (1%)

Query: 287 SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALD 346
           SP   TY  L+     A    +A +F   L   G   +++  N L++   +    D+ALD
Sbjct: 111 SPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALD 170

Query: 347 V-YDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV-----CGLEVEADLVVYNALLS 400
           +      EL  VPD +++  LL ++C  G+      L+      G     ++V YN ++ 
Sbjct: 171 ILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVID 230

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
            F K G  N+A  L+  M+ +G  PD  ++  ++  LC AR +D+A    + +V      
Sbjct: 231 GFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLP 290

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
           N   +  ++      G+  +A+++F+         DVV+ ++ +  L + G+ +EA  ++
Sbjct: 291 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVF 350

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKF 580
             M      P+ ++Y +ML  +  +  +  +  L   ++   I  D++T   L K     
Sbjct: 351 DTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANC 410

Query: 581 HSSSSAVNQLVEMCNLGLIPD 601
                A+    EM + G+ PD
Sbjct: 411 GMLDKAMIIFNEMRDHGVKPD 431



 Score = 41.2 bits (95), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 58/321 (18%), Positives = 114/321 (35%), Gaps = 49/321 (15%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D+  F  +I+ + +L GR    + I      VG    A  + + +  Y         L  
Sbjct: 501 DIVFFSSIINNLCKL-GRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRV 559

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
           FD M   G  PN      +++   KIGR+D G+ + +E       P+ + ++I +  L +
Sbjct: 560 FDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFE 619

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
                  K     M   G   ++  + I+L    K     EA  L   +  +   +++  
Sbjct: 620 AGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIIT 679

Query: 258 WTVLIDGFRRLRRLDMAGYLW-----------------------------------EKMV 282
              +IDG  + RR++ A  L+                                     M 
Sbjct: 680 LNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQ 739

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
             GC PN      +++  ++      A ++L  ++    + + +   +L+D  S  G+  
Sbjct: 740 NAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCR 799

Query: 343 DALDVYDGLLELKLVPDSYTF 363
           +         +++ +P  Y F
Sbjct: 800 E---------QIRFLPAKYHF 811


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 112/432 (25%), Positives = 200/432 (46%), Gaps = 7/432 (1%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
           F  M   G  P+    N ++D   K G +D   ++++E +      + +++N  +   CK
Sbjct: 211 FSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCK 270

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              +         M R+G   NV  F   ++ FCK G + EA +L   M   G +L+   
Sbjct: 271 FGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFT 330

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T LIDG  +  RLD A  L ++MV+ G   NVVTYT L+ G  + +  + A   L M+E
Sbjct: 331 YTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMME 390

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G   + + +  LI       + + AL +   +    L  D   + +L+  +C   +  
Sbjct: 391 KAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLD 450

Query: 378 LLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
               L+  ++   +E + ++Y  ++    K+G   +A+ +   +LD GF P+  ++  L+
Sbjct: 451 EAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALI 510

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            GLC A  IDEAI+ +  +       N   +TA+VD L + G  ++A+QLF   + +   
Sbjct: 511 DGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMS 570

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
           LD V YT  + G L+ G   +A+ L ++M    +  + + Y   +  FC    +   + +
Sbjct: 571 LDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREV 630

Query: 555 LQDVIDARIELD 566
             ++I   I  D
Sbjct: 631 FSEMIGHGIAPD 642



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 112/462 (24%), Positives = 210/462 (45%), Gaps = 13/462 (2%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G     R +   +  +GC+    TF   +  Y +      V +  +EM R G   +    
Sbjct: 202 GELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTY 261

Query: 158 NIVMDVLFKIGRVDLG----IKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N +++   K GR++        + +E  + N ++F+  +   CK   V     +   M  
Sbjct: 262 NALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRV 321

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +G   N   +  L++  CK GR+ +A  LL  M+  G  L+V  +TVL+DG  + R++  
Sbjct: 322 RGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAE 381

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  +   M + G   N + YT+LI G    K    A   L  ++++G   D+  +  LI 
Sbjct: 382 AEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQ 441

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE------ 387
            L  +   D+A  +   + E  L P+   + +++     SG+   +P+ +  L+      
Sbjct: 442 GLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGK---VPEAIAMLQKILDSG 498

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
            + +++ Y AL+   CKAG  ++A+  +N M D G  P+  ++  L+ GLC    ++EA+
Sbjct: 499 FQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAV 558

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            ++  +V    +++  V+TA++D  ++ G  H A  L  + I     LD+  YT  I G 
Sbjct: 559 QLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGF 618

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
                  EA  ++S+M    + P+   Y  ++  + K  N++
Sbjct: 619 CNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLE 660



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/410 (25%), Positives = 192/410 (46%), Gaps = 8/410 (1%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV +++ +I+   +  GR ET  G    + R G +    TF  F+  + +  +    ++ 
Sbjct: 257 DVVTYNALINCFCKF-GRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKL 315

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE---TQLP-NFLSFNIALCNLCK 197
           F +M   G   N F    ++D   K GR+D  I +L E     +P N +++ + +  LCK
Sbjct: 316 FAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCK 375

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              V+  +DV+ MM + G   N  ++  L++         +A  LL  M   G  L ++ 
Sbjct: 376 ERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISL 435

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  LI G   + +LD A  L  KM ++G  PN + YT+++    ++     A + L  + 
Sbjct: 436 YGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKIL 495

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G  P+++ +  LID L K GS D+A+  ++ + +L L P+   + +L+  +C +G  +
Sbjct: 496 DSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLN 555

Query: 378 LLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
              +L   +    +  D VVY ALL  + K G  + A  L   M+D G   D + +   +
Sbjct: 556 EAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFI 615

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
            G C    + EA  V+  ++ +  A +  V+  ++ +  + G   +AI L
Sbjct: 616 SGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISL 665



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 99/406 (24%), Positives = 184/406 (45%), Gaps = 44/406 (10%)

Query: 204 VKDVIGMMVRKGF----YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
            +D  G +VR+ F     PNV  F I+++  CK G +AEA  L   M  +G    V  + 
Sbjct: 168 ARDRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFN 227

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
            LIDG+ +   LD    L E+M ++GC  +VVTY +LI  F +      A+ +   ++ E
Sbjct: 228 SLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKRE 287

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS-- 377
           G   ++V  +  +D   K G   +A+ ++  +    +  + +T+  L+   C +GR    
Sbjct: 288 GVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDA 347

Query: 378 --LLPKLVCGLEVEADLVVYNALLSYFC----------------KAGF------------ 407
             LL ++V    V  ++V Y  L+   C                KAG             
Sbjct: 348 IVLLDEMV-RQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIH 406

Query: 408 -------PNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
                    +A+ L + M +KG   D   +  L++GLC   K+DEA ++   +  +    
Sbjct: 407 GHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEP 466

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
           N  ++T ++D   ++G+  +AI + ++ +   +  +V++Y   I GL + G  +EA   +
Sbjct: 467 NYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHF 526

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           ++M+ + + PN   Y  ++   CK   +    +L  +++   + LD
Sbjct: 527 NKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLD 572



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 132/283 (46%), Gaps = 3/283 (1%)

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPK 381
           AP++   N++ID L K G   +A  ++  + E+  +PD  TF SL+      G    + +
Sbjct: 185 APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQ 244

Query: 382 LVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
           LV  +     +AD+V YNAL++ FCK G    A   +  M  +G   +  +F   +   C
Sbjct: 245 LVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFC 304

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
               + EA+ ++  + +   A+N   +T ++D   +AGR   AI L    + +  PL+VV
Sbjct: 305 KEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVV 364

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           +YTV + GL +  +  EA  +   M+   V  N   Y  ++      +N +    LL ++
Sbjct: 365 TYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEM 424

Query: 559 IDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            +  +ELD      L + +   H    A + L +M   GL P+
Sbjct: 425 KNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPN 467



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 94/210 (44%), Gaps = 4/210 (1%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLN 199
           +M   G  PN      +MD  FK G+V   I    K+L     PN +++   +  LCK  
Sbjct: 458 KMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAG 517

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
            +         M   G  PNV+ +  L++  CK G + EA QL   M+  G SL    +T
Sbjct: 518 SIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYT 577

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
            L+DG+ +   L  A  L  KM+ +G   ++  YT  I GF    M   A      +   
Sbjct: 578 ALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGH 637

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
           G APD   +N LI    K+G+ ++A+ + D
Sbjct: 638 GIAPDRAVYNCLISKYQKLGNLEEAISLQD 667



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 75/308 (24%), Positives = 129/308 (41%), Gaps = 36/308 (11%)

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV 388
           + L+  L+  G  DDA+     + EL++ P++ T   +L  +       L+ +L   L  
Sbjct: 126 DTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA 185

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA-- 446
             ++  +N ++ + CK G   +A  L++ M + G  PD  +F  L+ G     ++DE   
Sbjct: 186 -PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQ 244

Query: 447 -------------INVYQGIV------------------MNNPAVNAHVHT--AIVDRLI 473
                        +  Y  ++                  M    V A+V T    VD   
Sbjct: 245 LVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFC 304

Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
           + G   +A++LF +  V    L+  +YT  I G  + GR ++A +L  +M    VP N  
Sbjct: 305 KEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVV 364

Query: 534 TYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEM 593
           TY V++   CKER +   + +L+ +  A +  +      L    F   +S  A+  L EM
Sbjct: 365 TYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEM 424

Query: 594 CNLGLIPD 601
            N GL  D
Sbjct: 425 KNKGLELD 432



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 4/173 (2%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNV 204
           GF PN      ++D L K G +D  I    + +     PN  ++   +  LCK   ++  
Sbjct: 498 GFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEA 557

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
             +   MV KG   +  ++  LL+ + K G + +A+ L   MI  G  L +  +T  I G
Sbjct: 558 VQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISG 617

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           F  L  +  A  ++ +M+ +G +P+   Y  LI  + +      A S  D +E
Sbjct: 618 FCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEME 670


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 112/432 (25%), Positives = 200/432 (46%), Gaps = 7/432 (1%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
           F  M   G  P+    N ++D   K G +D   ++++E +      + +++N  +   CK
Sbjct: 211 FSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCK 270

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              +         M R+G   NV  F   ++ FCK G + EA +L   M   G +L+   
Sbjct: 271 FGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFT 330

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T LIDG  +  RLD A  L ++MV+ G   NVVTYT L+ G  + +  + A   L M+E
Sbjct: 331 YTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMME 390

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G   + + +  LI       + + AL +   +    L  D   + +L+  +C   +  
Sbjct: 391 KAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLD 450

Query: 378 LLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
               L+  ++   +E + ++Y  ++    K+G   +A+ +   +LD GF P+  ++  L+
Sbjct: 451 EAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALI 510

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            GLC A  IDEAI+ +  +       N   +TA+VD L + G  ++A+QLF   + +   
Sbjct: 511 DGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMS 570

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
           LD V YT  + G L+ G   +A+ L ++M    +  + + Y   +  FC    +   + +
Sbjct: 571 LDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREV 630

Query: 555 LQDVIDARIELD 566
             ++I   I  D
Sbjct: 631 FSEMIGHGIAPD 642



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 117/489 (23%), Positives = 219/489 (44%), Gaps = 20/489 (4%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G     R +   +  +GC+    TF   +  Y +      V +  +EM R G   +    
Sbjct: 202 GELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTY 261

Query: 158 NIVMDVLFKIGRVDLG----IKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N +++   K GR++        + +E  + N ++F+  +   CK   V     +   M  
Sbjct: 262 NALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRV 321

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +G   N   +  L++  CK GR+ +A  LL  M+  G  L+V  +TVL+DG  + R++  
Sbjct: 322 RGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAE 381

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  +   M + G   N + YT+LI G    K    A   L  ++++G   D+  +  LI 
Sbjct: 382 AEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQ 441

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE------ 387
            L  +   D+A  +   + E  L P+   + +++     SG+   +P+ +  L+      
Sbjct: 442 GLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGK---VPEAIAMLQKILDSG 498

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
            + +++ Y AL+   CKAG  ++A+  +N M D G  P+  ++  L+ GLC    ++EA+
Sbjct: 499 FQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAV 558

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            ++  +V    +++  V+TA++D  ++ G  H A  L  + I     LD+  YT  I G 
Sbjct: 559 QLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGF 618

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK-------MVKRLLQDVID 560
                  EA  ++S+M    + P+   Y  ++  + K  N++        ++R+L    D
Sbjct: 619 CNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEMERVLPSCTD 678

Query: 561 ARIELDYHT 569
           +    D  T
Sbjct: 679 SDTATDGKT 687



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/410 (25%), Positives = 192/410 (46%), Gaps = 8/410 (1%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV +++ +I+   +  GR ET  G    + R G +    TF  F+  + +  +    ++ 
Sbjct: 257 DVVTYNALINCFCKF-GRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKL 315

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE---TQLP-NFLSFNIALCNLCK 197
           F +M   G   N F    ++D   K GR+D  I +L E     +P N +++ + +  LCK
Sbjct: 316 FAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCK 375

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              V+  +DV+ MM + G   N  ++  L++         +A  LL  M   G  L ++ 
Sbjct: 376 ERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISL 435

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  LI G   + +LD A  L  KM ++G  PN + YT+++    ++     A + L  + 
Sbjct: 436 YGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKIL 495

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G  P+++ +  LID L K GS D+A+  ++ + +L L P+   + +L+  +C +G  +
Sbjct: 496 DSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLN 555

Query: 378 LLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
              +L   +    +  D VVY ALL  + K G  + A  L   M+D G   D + +   +
Sbjct: 556 EAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFI 615

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
            G C    + EA  V+  ++ +  A +  V+  ++ +  + G   +AI L
Sbjct: 616 SGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISL 665



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 113/471 (23%), Positives = 208/471 (44%), Gaps = 62/471 (13%)

Query: 148 FGFTPNTFARNIVMDVLFKI----GRVDLGIKVL---KETQLPNFLSFNIALCN--LCKL 198
               P   A   V+D L  +    G +D  ++ +   +E ++P     N   CN  L +L
Sbjct: 112 LALGPRRSALASVVDTLLSVLADRGLLDDAVRAVARVRELRVPP----NTRTCNHILLRL 167

Query: 199 NDVSNVKDVIGMMVRKGF----YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
                 +D  G +VR+ F     PNV  F I+++  CK G +AEA  L   M  +G    
Sbjct: 168 -----ARDRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPD 222

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           V  +  LIDG+ +   LD    L E+M ++GC  +VVTY +LI  F +      A+ +  
Sbjct: 223 VVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFA 282

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            ++ EG   ++V  +  +D   K G   +A+ ++  +    +  + +T+  L+   C +G
Sbjct: 283 AMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAG 342

Query: 375 RFS----LLPKLVCGLEVEADLVVYNALLSYFC----------------KAGF------- 407
           R      LL ++V    V  ++V Y  L+   C                KAG        
Sbjct: 343 RLDDAIVLLDEMV-RQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLY 401

Query: 408 ------------PNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
                         +A+ L + M +KG   D   +  L++GLC   K+DEA ++   +  
Sbjct: 402 TTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDE 461

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
           +    N  ++T ++D   ++G+  +AI + ++ +   +  +V++Y   I GL + G  +E
Sbjct: 462 SGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDE 521

Query: 516 AYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           A   +++M+ + + PN   Y  ++   CK   +    +L  +++   + LD
Sbjct: 522 AISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLD 572



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 132/283 (46%), Gaps = 3/283 (1%)

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPK 381
           AP++   N++ID L K G   +A  ++  + E+  +PD  TF SL+      G    + +
Sbjct: 185 APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQ 244

Query: 382 LVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
           LV  +     +AD+V YNAL++ FCK G    A   +  M  +G   +  +F   +   C
Sbjct: 245 LVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFC 304

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
               + EA+ ++  + +   A+N   +T ++D   +AGR   AI L    + +  PL+VV
Sbjct: 305 KEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVV 364

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           +YTV + GL +  +  EA  +   M+   V  N   Y  ++      +N +    LL ++
Sbjct: 365 TYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEM 424

Query: 559 IDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            +  +ELD      L + +   H    A + L +M   GL P+
Sbjct: 425 KNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPN 467



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/308 (24%), Positives = 129/308 (41%), Gaps = 36/308 (11%)

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV 388
           + L+  L+  G  DDA+     + EL++ P++ T   +L  +       L+ +L   L  
Sbjct: 126 DTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA 185

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA-- 446
             ++  +N ++ + CK G   +A  L++ M + G  PD  +F  L+ G     ++DE   
Sbjct: 186 -PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQ 244

Query: 447 -------------INVYQGIV------------------MNNPAVNAHVHT--AIVDRLI 473
                        +  Y  ++                  M    V A+V T    VD   
Sbjct: 245 LVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFC 304

Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
           + G   +A++LF +  V    L+  +YT  I G  + GR ++A +L  +M    VP N  
Sbjct: 305 KEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVV 364

Query: 534 TYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEM 593
           TY V++   CKER +   + +L+ +  A +  +      L    F   +S  A+  L EM
Sbjct: 365 TYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEM 424

Query: 594 CNLGLIPD 601
            N GL  D
Sbjct: 425 KNKGLELD 432


>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
 gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
          Length = 1039

 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 125/492 (25%), Positives = 217/492 (44%), Gaps = 49/492 (9%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCKLNDVSNV 204
           GF+P       +++   K  ++D  ++V    +      +  ++ + +  L K + +   
Sbjct: 387 GFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEA 446

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV--LI 262
           KD +  +   G  PNV ++  +++ +CK+G++  A ++  L  T       NAWT   LI
Sbjct: 447 KDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKL--TEHEGCRPNAWTYSSLI 504

Query: 263 DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
            G  + ++L  A  L  KM ++G +P V+TYT+LI+G  +   F  AF   +M+E  G  
Sbjct: 505 YGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLT 564

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL 382
           PD   +NVL D L K G  ++A                Y+F        L  +  +L K 
Sbjct: 565 PDEQAYNVLTDALCKSGRAEEA----------------YSF--------LVKKGVVLTK- 599

Query: 383 VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
                     V Y +L+  F KAG    A  L   M+++G   D++++  LL+ LC  +K
Sbjct: 600 ----------VTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKK 649

Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTV 502
           ++EA+++   + +     N   +T I+  +I+ G+   A  +F   I   +    ++YTV
Sbjct: 650 LNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTV 709

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
            I    + GR EEA  L  +M+   V P+  TY V +        +      L+ +IDA 
Sbjct: 710 FISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDAS 769

Query: 563 IELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTPV---- 618
            E +Y T   L K   K   +++       M N  +  D +W+ L  +    + P     
Sbjct: 770 CEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNW-IKLDTVWQLLERMVKHGLNPTAVTY 828

Query: 619 -SLFDGFVPCER 629
            S+  GF    R
Sbjct: 829 SSIIAGFCKATR 840



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 112/455 (24%), Positives = 210/455 (46%), Gaps = 17/455 (3%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRV 170
           GC     T+ L +R   +    G + +A    DEM R G  P+ +  N ++D   K GR+
Sbjct: 283 GCSPNLHTYTLLIRGLCK---EGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRL 339

Query: 171 D--LGIKVLKETQ--LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEIL 226
              LGIK L E     P+  ++N  +  LC        ++++   + +GF P V  F  +
Sbjct: 340 KDALGIKTLMEGNGCNPDDWTYNSLIHGLCG-GKPDEAEELLNGAIARGFSPTVITFTNI 398

Query: 227 LNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGC 286
           +N +CK  +I +A ++  +MI+    L + A+ VLI    +  RL  A     ++  NG 
Sbjct: 399 INGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGL 458

Query: 287 SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALD 346
           SPNVV YTS+I  + +      A     + E EG  P+   ++ LI  L +      A+ 
Sbjct: 459 SPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMA 518

Query: 347 VYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFC 403
           +   + E  + P   T+ +L+   C    F    +L   +E   +  D   YN L    C
Sbjct: 519 LITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALC 578

Query: 404 KAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAH 463
           K+G   +A   Y+ ++ KG      ++  L+ G   A   + A  + + +V      ++H
Sbjct: 579 KSGRAEEA---YSFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSH 635

Query: 464 VHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM 523
            ++ ++  L +  + ++A+ +  +  +     ++V+YT+ I  +++ G+ + A  ++++M
Sbjct: 636 TYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEM 695

Query: 524 KHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
                 P+A TY V + S+CK   I+    L+ ++
Sbjct: 696 ISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEM 730



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 105/418 (25%), Positives = 189/418 (45%), Gaps = 4/418 (0%)

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           +N+AL +L + +   ++  +   +V++G  P+   +  ++  +CK G +A A++   L+ 
Sbjct: 151 YNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLR 210

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
             G  +       L+ G+ R   L  A +L   M   GC  N  +YT LI+G  E +   
Sbjct: 211 ESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVR 270

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A   L M+  +G +P+L  + +LI  L K G   DA  + D +    +VP  +T+ +++
Sbjct: 271 EALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMI 330

Query: 368 STVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
              C SGR      +  L+ G     D   YN+L+   C  G P++A +L N  + +GF+
Sbjct: 331 DGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLC-GGKPDEAEELLNGAIARGFS 389

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           P   +F  ++ G C A KID+A+ V   ++ +   ++   +  ++  LI+  R  +A   
Sbjct: 390 PTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDT 449

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
                      +VV YT  I    + G+   A  ++   +H    PNA+TY  ++    +
Sbjct: 450 LNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQ 509

Query: 545 ERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
           ++ +     L+  + +  I     T   L +   K H   +A      M   GL PDE
Sbjct: 510 DQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDE 567



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 113/556 (20%), Positives = 223/556 (40%), Gaps = 62/556 (11%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D+Q++  +ISV+ +   R +  +  + E+   G       +   +  Y +    G  LE 
Sbjct: 426 DLQAYGVLISVLIK-KHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEV 484

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           F      G  PN +  + ++  L +  ++   + ++ + Q     P  +++   +   CK
Sbjct: 485 FKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCK 544

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            ++  N   +  MM + G  P+ + + +L +  CK GR  EAY  L   +  G  L+   
Sbjct: 545 KHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---VKKGVVLTKVT 601

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T L+DGF +    + A  L EKMV  GC  +  TY+ L++   + K  + A S LD + 
Sbjct: 602 YTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMT 661

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G   ++V + ++I  + K G +D A  +++ ++     P + T+   +S+ C  GR  
Sbjct: 662 LRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIE 721

Query: 378 LLPKLVCGLE---VEADLVVYNA-----------------------------------LL 399
               L+  +E   V  D+V YN                                    LL
Sbjct: 722 EAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLL 781

Query: 400 SYFCKAGFPNQAV----------------KLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
            +F K    N                   +L   M+  G  P   ++  ++ G C A ++
Sbjct: 782 KHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRL 841

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           +EA  +   ++  + + N  ++T ++    +     KA       I   +   + SY   
Sbjct: 842 EEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYL 901

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           I GL + G  ++A  L+  +  +    N   ++++     K  ++ +  +LL  + +   
Sbjct: 902 ITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHVDICSQLLSAMENRHC 961

Query: 564 ELDYHTSIRLTKFIFK 579
            +D  T   +T  I +
Sbjct: 962 RIDSETYSMVTNNIHE 977



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 130/614 (21%), Positives = 258/614 (42%), Gaps = 68/614 (11%)

Query: 45  PIILAPHIVHSTLLNCP----SDLIALSFFIWCAKQRDYFHDVQS--------------- 85
           P + A H+  + L   P        AL+FF W A++  + H   S               
Sbjct: 50  PFVTAAHV--ADLFRAPVAPLDPATALAFFEWVARRPGFRHTAASHAALLQLLARRRAPA 107

Query: 86  -FDHMISVVTRLTGRFETVRGIVGELA---RVG---CVIKAQTFLLFLRIYWRGEMYGMV 138
            +D ++  +   +G  E +R  V  +    R G     +  + + L LR   R +M   +
Sbjct: 108 NYDKLVVSMISCSGTAEDMREAVDAIQAIRRAGGKRLALSPKCYNLALRSLLRFDMTEHM 167

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG---IKVLKETQLP-NFLSFNIALCN 194
            + + ++ + G  P+T   N ++    K G + +     ++L+E+ +  +  + N  L  
Sbjct: 168 GKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLG 227

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
            C+  D+     ++ MM   G   N   + IL+   C+   + EA  LL +M+  G S +
Sbjct: 228 YCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPN 287

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           ++ +T+LI G  +  R+  A  L ++M + G  P+V TY ++I G+ ++     A     
Sbjct: 288 LHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKT 347

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
           ++E  G  PD   +N LI  L   G  D+A ++ +G +     P   TF ++++  C + 
Sbjct: 348 LMEGNGCNPDDWTYNSLIHGLCG-GKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAE 406

Query: 375 RFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
           +      +  ++   + + DL  Y  L+S   K     +A    N +   G +P+   + 
Sbjct: 407 KIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYT 466

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            ++   C   K+  A+ V++         NA  +++++  LI+  + HKA+ L  +   +
Sbjct: 467 SIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQED 526

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN-------------------A 532
                V++YT  I+G  +    + A+ L+  M+   + P+                   A
Sbjct: 527 GITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEA 586

Query: 533 Y-------------TYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK 579
           Y             TY  ++  F K  N +    L++ +++   + D HT   L + + K
Sbjct: 587 YSFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCK 646

Query: 580 FHSSSSAVNQLVEM 593
               + A++ L +M
Sbjct: 647 QKKLNEALSILDQM 660



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 87/451 (19%), Positives = 184/451 (40%), Gaps = 30/451 (6%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           +Q     D Q+++ +   + + +GR E        L + G V+   T+   +  + +   
Sbjct: 559 EQNGLTPDEQAYNVLTDALCK-SGRAEEAYSF---LVKKGVVLTKVTYTSLVDGFSKAGN 614

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNI 190
                   ++M   G   ++   ++++  L K  +++  + +L +  L     N +++ I
Sbjct: 615 TEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTI 674

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +  + K     + K +   M+  G  P+   + + ++ +CK+GRI EA  L+G M   G
Sbjct: 675 IISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNG 734

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
            +  V  + V I+G   +  +D A    ++M+   C PN  TY  L+K F++  + +   
Sbjct: 735 VAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANA-- 792

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
                            H V    +      D    + + +++  L P + T+ S+++  
Sbjct: 793 -----------------HYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGF 835

Query: 371 CLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           C + R     +L   + G ++  +  +Y  L+   C      +A      M++ GF P  
Sbjct: 836 CKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHL 895

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
            S+  L+ GLC     D+A  ++  ++  +   N      + D L++AG      QL   
Sbjct: 896 ESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHVDICSQLLSA 955

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
                  +D  +Y++    + E     E+Y+
Sbjct: 956 MENRHCRIDSETYSMVTNNIHEASGMYESYM 986


>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 450

 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 110/426 (25%), Positives = 195/426 (45%), Gaps = 3/426 (0%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P  ++FN  +  LC    V     ++  MV KG + +V  +  ++N  CKMG    A  L
Sbjct: 8   PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 67

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           L  M        V  ++ +ID   +      A YL+ +M++ G +PNV TY  +I GF  
Sbjct: 68  LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 127

Query: 303 AKMFSIAFSFL-DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
              +S A   L DM+E E + PD++  N LI    K G   +A  + D +L   + PD+ 
Sbjct: 128 FGRWSDAQRLLRDMIEREIN-PDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTV 186

Query: 362 TFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
           T+ S++   C   RF    K +  L    D+V +N ++  +C+A   ++ ++L   +  +
Sbjct: 187 TYNSMIYGFCKHNRFDD-AKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR 245

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
           G   +  ++  L+ G C    ++ A +++Q ++ +    +      ++    E  +  +A
Sbjct: 246 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 305

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
           ++LF    + K  LD V+Y + I G+ +G + +EA+ L+  +    V P+  TY VM+  
Sbjct: 306 LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISG 365

Query: 542 FCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           FC +  I     L   + D   E D  T   L +   K      ++  + EM + G   D
Sbjct: 366 FCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGD 425

Query: 602 EMWRKL 607
               K+
Sbjct: 426 AFTIKM 431



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 90/347 (25%), Positives = 159/347 (45%), Gaps = 12/347 (3%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK---ETQL-PNFLSFNIALCNLCK 197
           F EM   G  PN F  N ++D     GR     ++L+   E ++ P+ L+FN  +    K
Sbjct: 103 FSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVK 162

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              +   + +   M+ +  +P+   +  ++  FCK  R  +A  +  LM     S  V  
Sbjct: 163 EGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVT 218

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  +ID + R +R+D    L  ++ + G   N  TY +LI GF E    + A      + 
Sbjct: 219 FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 278

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
           S G  PD +  N+L+    +    ++AL++++ +   K+  D+  +  ++  +C   +  
Sbjct: 279 SHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVD 338

Query: 378 LLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
               L C L    VE D+  YN ++S FC     + A  L++ M D G  PDN ++  L+
Sbjct: 339 EAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 398

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
           RG   A +ID++I +   +  N  + +A     + D LI  GR  K+
Sbjct: 399 RGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD-LITDGRLDKS 444



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 102/435 (23%), Positives = 194/435 (44%), Gaps = 29/435 (6%)

Query: 134 MYGMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL---KETQL-PNFL 186
           + G VLEA    ++M   G   +      +++ + K+G     + +L   +ET + P+ +
Sbjct: 22  LEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVV 81

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
            ++  +  LCK    S+ + +   M+ KG  PNV  +  +++ FC  GR ++A +LL  M
Sbjct: 82  IYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDM 141

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
           I    +  V  +  LI    +  +L  A  L ++M+     P+ VTY S+I GF +   F
Sbjct: 142 IEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRF 201

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
             A    D++ S    PD+V  N +ID   +    D+ + +   +    LV ++ T+ +L
Sbjct: 202 DDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 257

Query: 367 LSTVC----LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
           +   C    L+    L  +++    V  D +  N LL  FC+     +A++L+  +    
Sbjct: 258 IHGFCEVDNLNAAQDLFQEMI-SHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 316

Query: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI 482
              D  ++  ++ G+C   K+DEA +++  + ++    +   +  ++           A 
Sbjct: 317 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN 376

Query: 483 QLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
            LF +     +  D  +Y   IRG L+ G  +++  L S+M+      +A+T        
Sbjct: 377 VLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT-------- 428

Query: 543 CKERNIKMVKRLLQD 557
                IKMV  L+ D
Sbjct: 429 -----IKMVADLITD 438



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/288 (20%), Positives = 119/288 (41%), Gaps = 44/288 (15%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
           +R+   DV +F+ +IS   +    FE  + +  E+          T+   +  + +   +
Sbjct: 143 EREINPDVLTFNALISASVKEGKLFEAEK-LCDEMLHRCIFPDTVTYNSMIYGFCKHNRF 201

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIA 191
                 FD M     +P+    N ++DV  +  RVD G+++L+E      + N  ++N  
Sbjct: 202 DDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 257

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPN--------------------VRMFE------- 224
           +   C++++++  +D+   M+  G  P+                    + +FE       
Sbjct: 258 IHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKI 317

Query: 225 --------ILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
                   I+++  CK  ++ EA+ L   +   G    V  + V+I GF     +  A  
Sbjct: 318 DLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANV 377

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
           L+ KM  NG  P+  TY +LI+G ++A     +   +  + S G + D
Sbjct: 378 LFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGD 425


>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 137/602 (22%), Positives = 268/602 (44%), Gaps = 54/602 (8%)

Query: 48  LAPHIV-HSTLLN--CPSDLIALSFFIWCAKQ-RDYFHDVQSFDHMISVVTRLTGRFETV 103
           L P+++ ++TL++  C S  +  + +++     +    DV ++  +++ + + +G+ E  
Sbjct: 83  LEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCK-SGKVEEA 141

Query: 104 RGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRF---GFTPNTFARNIV 160
           + +  E+  VG V    ++   +   ++    G V EAF   GR    G   +      +
Sbjct: 142 KSVFREMEEVGVVPNRFSYATLIDSLFK---EGNVAEAFVLQGRMVVRGIGFDVVVYTAL 198

Query: 161 MDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
           MD LFK G      D+   +L+E+ +PN ++++  +   CKL DV+  + ++  M  K  
Sbjct: 199 MDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHI 258

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF----------- 265
           +PNV ++  +++ + K G + EA  ++  M+      +V  +  LIDG+           
Sbjct: 259 FPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALD 318

Query: 266 ------------------------RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
                                   +R  R++ A  L++ M+  G  P+ V YTS++ GF 
Sbjct: 319 LFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFF 378

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           +A   S AF+    +  +    D+V +NVLI+ L K+G Y+     + G+ +L L PDS 
Sbjct: 379 KAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESE-SFHTGMRQLGLAPDSA 437

Query: 362 TFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           TF ++++  C  G      KL+  ++   ++ + +  N L+   C AG   + + L N M
Sbjct: 438 TFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDM 497

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
           L  GF P   +   +L     +R+ D  ++++  +V     ++   +  ++      G  
Sbjct: 498 LVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMI 557

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            +A  +F+  + +    D+++Y   I G       ++A+ ++SQM    V PN  TY ++
Sbjct: 558 RRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNIL 617

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGL 598
           L      R IK    L+  + +  +  +  T   L     K  +    V    EM   G 
Sbjct: 618 LGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGF 677

Query: 599 IP 600
           +P
Sbjct: 678 VP 679



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/443 (21%), Positives = 209/443 (47%), Gaps = 43/443 (9%)

Query: 158 NIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N+++D   + G +   +++L+    E   P+ +++N  +   CK+ D+   K ++G +  
Sbjct: 21  NVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISL 80

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
               PNV  +  L++ +CK   + +A  +   M        V  +T +++G  +  +++ 
Sbjct: 81  VNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEE 140

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  ++ +M + G  PN  +Y +LI    +    + AF     +   G   D+V +  L+D
Sbjct: 141 AKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMD 200

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE---A 390
            L K G  ++A D++  LLE  LVP+  T+ +L+   C  G  +    L+  +E +    
Sbjct: 201 GLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFP 260

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           +++VY++++  + K G  N+A+ +   M+ +   P+ + +  L+ G   A +   A++++
Sbjct: 261 NVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLF 320

Query: 451 Q-----GIVMNNPAVNAHV------------------------------HTAIVDRLIEA 475
           +     G+  NN  +++ V                              +T+++D   +A
Sbjct: 321 KEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKA 380

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
           G+   A  + +    +    DVV+Y V I GL + G+  E+   ++ M+ + + P++ T+
Sbjct: 381 GKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATF 439

Query: 536 RVMLLSFCKERNIKMVKRLLQDV 558
             M+ ++CKE N+    +LL ++
Sbjct: 440 NTMINAYCKEGNLGNALKLLNEM 462



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 95/433 (21%), Positives = 192/433 (44%), Gaps = 11/433 (2%)

Query: 136 GMVLEAFDEMGRF---GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIAL 192
           G++ EA D M +       PN F    ++D  FK  +  + + + KE +       N  +
Sbjct: 276 GLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVI 335

Query: 193 ----CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
                NL +   +    ++   M+ +G  P+   +  +++ F K G+ ++A+ +   M  
Sbjct: 336 DSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTE 395

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
             +   V A+ VLI+G  +L + +   +    M Q G +P+  T+ ++I  + +      
Sbjct: 396 KSSGFDVVAYNVLINGLFKLGKYESESF-HTGMRQLGLAPDSATFNTMINAYCKEGNLGN 454

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A   L+ ++S G  P+ +  N+L+  L   G  +  +D+ + +L +   P   T  ++L 
Sbjct: 455 ALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLD 514

Query: 369 TVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
               S R  ++  +   + G+ V+ DL  YN L+S FC+ G   +A  ++  M+ KG   
Sbjct: 515 ASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILA 574

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           D  ++  L+ G C +  + +A  V+  ++    + N   +  ++  L  A    +A  L 
Sbjct: 575 DIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLV 634

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
            +        +  +Y + + G  + G  +E   LY +M      P   TY V++  F K 
Sbjct: 635 NQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKG 694

Query: 546 RNIKMVKRLLQDV 558
           + +   K L+Q++
Sbjct: 695 KKMSQAKELMQEM 707



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 101/423 (23%), Positives = 193/423 (45%), Gaps = 8/423 (1%)

Query: 129 YWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPN 184
           Y++ +  G+ L+ F EM   G   N F  +  ++ L + GR++   ++ K+      LP+
Sbjct: 307 YFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPD 366

Query: 185 FLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLG 244
            +++   +    K    S+  ++   M  K    +V  + +L+N   K+G+  E+     
Sbjct: 367 RVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHT 425

Query: 245 LMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
            M  LG +     +  +I+ + +   L  A  L  +M   G  PN +T   L++    A 
Sbjct: 426 GMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAG 485

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
                   L+ +   G  P    H  ++D  SK    D  L ++D L+ + +  D  T+ 
Sbjct: 486 EIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYN 545

Query: 365 SLLSTVCLSG---RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
           +L+ST C  G   R +L+ K + G  + AD++ YNAL+  +C +    +A  +++ ML +
Sbjct: 546 TLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTE 605

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
           G +P+  ++  LL GL  AR I EA  +   +       NA  +  +V    + G   + 
Sbjct: 606 GVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKEC 665

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
           ++L+   I + +     +Y V I    +G +  +A  L  +M+   +PPN+ TY +++  
Sbjct: 666 VKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICG 725

Query: 542 FCK 544
           + K
Sbjct: 726 WYK 728



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/379 (23%), Positives = 179/379 (47%), Gaps = 5/379 (1%)

Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
           +V  F +L++ +C+ G I+ A +LL  M T G +  +  +  L++GF ++  L  A  L 
Sbjct: 16  SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLM 75

Query: 279 EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
            ++      PNV+TYT+LI  + +++    A    D +  +   PD+V +  +++ L K 
Sbjct: 76  GEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKS 135

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVV 394
           G  ++A  V+  + E+ +VP+ +++ +L+ ++   G     F L  ++V    +  D+VV
Sbjct: 136 GKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVV-RGIGFDVVV 194

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           Y AL+    KAG  N A  ++  +L++   P+  ++  L+ G C    +++   + Q + 
Sbjct: 195 YTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEME 254

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
             +   N  V+++IVD   + G  ++A+ + R+ +      +V  Y   I G  +  +  
Sbjct: 255 EKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRG 314

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLT 574
            A  L+ +MK   +  N +     + +  +   ++    L +D++   +  D      + 
Sbjct: 315 IALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMM 374

Query: 575 KFIFKFHSSSSAVNQLVEM 593
              FK    S A N   EM
Sbjct: 375 DGFFKAGKESDAFNIAQEM 393



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/308 (24%), Positives = 145/308 (47%), Gaps = 10/308 (3%)

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLND 200
           M + G  P++   N +++   K G +   +K+L E +     PN ++ NI +  LC   +
Sbjct: 427 MRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGE 486

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
           +    D++  M+  GF+P     + +L+   K  R      +   ++ +G  L ++ +  
Sbjct: 487 IEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNT 546

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           LI  F RL  +  A  +++ M+  G   +++TY +LI G+  +     AF+    + +EG
Sbjct: 547 LISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEG 606

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
            +P++  +N+L+  LS      +A  + + + E  LVP++ T+  L+S     G      
Sbjct: 607 VSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECV 666

Query: 381 KLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
           KL C +  +        YN L+S F K    +QA +L   M  +G  P++ ++  L   +
Sbjct: 667 KLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDIL---I 723

Query: 438 CGARKIDE 445
           CG  K+ +
Sbjct: 724 CGWYKLSK 731



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 101/215 (46%)

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
           E+   +  +N L+  +C+ G  ++AV+L   M  +G  PD  ++  L+ G C    +  A
Sbjct: 12  EIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTA 71

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
             +   I + N   N   +T ++D   ++     A+ ++    V+    DVV+YT  + G
Sbjct: 72  KKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNG 131

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           L + G+ EEA  ++ +M+ + V PN ++Y  ++ S  KE N+     L   ++   I  D
Sbjct: 132 LCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFD 191

Query: 567 YHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
                 L   +FK   +++A +    +    L+P+
Sbjct: 192 VVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPN 226


>gi|255578371|ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223530468|gb|EEF32352.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 554

 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 121/511 (23%), Positives = 220/511 (43%), Gaps = 49/511 (9%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           RF+       ++   G  + + T+  F+    + + +  + E   +M      P+ +A N
Sbjct: 59  RFDLANHYYSQMGTRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFN 118

Query: 159 IVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
           I + +LF  GR+DL +    K++K  + P+ +++ I +  +CK+            M+ K
Sbjct: 119 IYLHLLFVEGRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHK 178

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLL-GLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           GF P+ +    ++   C   ++  AY+L+  +M +    LS   +  LI GF R  R+D 
Sbjct: 179 GFSPDNKACGAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDK 238

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  +   M +NGC P++VTY   +  F +  M   A   L ++E  G  PD+  +N L+ 
Sbjct: 239 AQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLK 298

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLV 393
            + K    D A                     LL T        + PK +C      D+V
Sbjct: 299 GICKGNCPDKAY--------------------LLMTN------KMWPKGLC------DVV 326

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            YN ++  FCK G    A KL+  M  KG  PD  +F   ++   G    + A  +   +
Sbjct: 327 SYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQM 386

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
                + +   +T I+D L ++G+   A  +F   + +    DV+S+   I G  +  R 
Sbjct: 387 TEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRV 446

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
            EA  LY +M++    P+  TY++++    +E+ I +   +   ++D    LD   +  L
Sbjct: 447 SEAMHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIACMVWGQMMDKGFTLDRAIAQTL 506

Query: 574 TK------------FIFKFHSSSSAVNQLVE 592
            +              FKFH + S   ++++
Sbjct: 507 IRGNSIENASTSRCLDFKFHQNYSPSFRIIK 537



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 120/465 (25%), Positives = 201/465 (43%), Gaps = 17/465 (3%)

Query: 166 KIGRVDLGIKVLKETQLPNFLSFNI-------ALCNLCKLNDVSNVKDVIGMMVRKGFYP 218
           K G +D  ++V  E    N   F+I        L N  +  D++N       M  +GF  
Sbjct: 21  KAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRF-DLAN--HYYSQMGTRGFSL 77

Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
           +   +   +   CK+       +LL  M TL     + A+ + +       R+D+A  ++
Sbjct: 78  SSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRIDLALEVF 137

Query: 279 EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
           EK+V+NG  P+VVTYT +I G  + K F  A  F   +  +G +PD      ++  L   
Sbjct: 138 EKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVGLCDG 197

Query: 339 GSYDDALD-VYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVV 394
              D A + + D +   ++   +  + +L+S  C +GR      +   +     E DLV 
Sbjct: 198 RKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDLVT 257

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           YN  L+YFC     + A KL   M   G  PD YS+  LL+G+C     D+A  +    +
Sbjct: 258 YNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPDKAYLLMTNKM 317

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
                 +   +  I+    + G    A +LF     +  P DVV++T+ I+  L  G   
Sbjct: 318 WPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFN 377

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLT 574
            A  L  QM  + + P+   Y  ++   CK   ++M   +  D+++  I  D  +   L 
Sbjct: 378 IAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALI 437

Query: 575 KFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKL---GLLSDETMT 616
               K    S A++   EM N G  PDE+  KL   GL+ ++ ++
Sbjct: 438 NGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKIS 482



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 116/251 (46%), Gaps = 5/251 (1%)

Query: 86  FDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEM 145
           ++ +IS   R  GR +  + I   + R GC     T+ +FL  +    M     +    M
Sbjct: 223 YNALISGFCR-AGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLM 281

Query: 146 GRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP----NFLSFNIALCNLCKLNDV 201
            R G  P+ ++ N ++  + K    D    ++     P    + +S+N  +   CK+ D 
Sbjct: 282 ERSGIEPDVYSYNQLLKGICKGNCPDKAYLLMTNKMWPKGLCDVVSYNTIIKAFCKIGDT 341

Query: 202 SNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVL 261
           ++   +   M +KG  P+V  F I +  F   G    A +LL  M  +G S     +T +
Sbjct: 342 TSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTI 401

Query: 262 IDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH 321
           ID   +  +++MA  ++  MV+ G SP+V+++ +LI GF +    S A    + +++ G 
Sbjct: 402 IDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQNRGS 461

Query: 322 APDLVFHNVLI 332
            PD V + ++I
Sbjct: 462 YPDEVTYKLII 472



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 82/353 (23%), Positives = 153/353 (43%), Gaps = 22/353 (6%)

Query: 262 IDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH 321
           I G+ +   +D A  ++++M Q+ C    + Y   I   +    F +A  +   + + G 
Sbjct: 16  IAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQMGTRGF 75

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPK 381
           +     ++  I  L K+ ++    ++   +  L  +PD + F   L  + + GR  L   
Sbjct: 76  SLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRIDL--- 132

Query: 382 LVCGLEV---------EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
               LEV         + D+V Y  ++   CK    + A++ +  M+ KGF+PDN +   
Sbjct: 133 ---ALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGA 189

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPA-VNAHVHTAIVDRLIEAGRCHK--AIQLF-RRA 488
           ++ GLC  RK+D A  +   ++ +    ++  V+ A++     AGR  K  AI+ F RR 
Sbjct: 190 IVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRN 249

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
             E    D+V+Y V +    +    ++A  L   M+   + P+ Y+Y  +L   CK    
Sbjct: 250 GCEP---DLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCP 306

Query: 549 KMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
                L+ + +  +   D  +   + K   K   ++SA     EM   G+ PD
Sbjct: 307 DKAYLLMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPD 359


>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
          Length = 882

 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 137/602 (22%), Positives = 267/602 (44%), Gaps = 54/602 (8%)

Query: 48  LAPHIV-HSTLLN--CPSDLIALSFFIWCAKQ-RDYFHDVQSFDHMISVVTRLTGRFETV 103
           L P+++ ++TL++  C S  +  + +++     +    DV ++  +++ + + +G+ E  
Sbjct: 83  LEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCK-SGKVEEA 141

Query: 104 RGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRF---GFTPNTFARNIV 160
           + +  E+  VG V    ++   +   ++    G V EAF   GR    G   +      +
Sbjct: 142 KSVFREMEEVGVVPNRFSYATLIDSLFK---EGNVAEAFVLQGRMVVRGIGFDVVVYTAL 198

Query: 161 MDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
           MD LFK G      D+   +L+E+ +PN ++++  +   CKL DV+  + ++  M  K  
Sbjct: 199 MDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHI 258

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF----------- 265
           +PNV ++  +++ + K G + EA  ++  M+      +V  +  LIDG+           
Sbjct: 259 FPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALD 318

Query: 266 ------------------------RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
                                   +R  R++ A  L++ M+  G  P+ V YTS++ GF 
Sbjct: 319 LFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFF 378

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           +A   S AF+    +  +    D+V +NVLI+ L K+G Y+     + G+ +L L PDS 
Sbjct: 379 KAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESE-SFHTGMRQLGLAPDSA 437

Query: 362 TFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           TF ++++  C  G      KL+  ++   ++ + +  N L+   C AG   + + L N M
Sbjct: 438 TFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDM 497

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
           L  GF P   +   +L     +R+ D  ++ +  +V     ++   +  ++      G  
Sbjct: 498 LVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMI 557

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            +A  +F+  + +    D+++Y   I G       ++A+ ++SQM    V PN  TY ++
Sbjct: 558 RRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNIL 617

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGL 598
           L      R IK    L+  + +  +  +  T   L     K  +    V    EM   G 
Sbjct: 618 LGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGF 677

Query: 599 IP 600
           +P
Sbjct: 678 VP 679



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/443 (21%), Positives = 209/443 (47%), Gaps = 43/443 (9%)

Query: 158 NIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N+++D   + G +   +++L+    E   P+ +++N  +   CK+ D+   K ++G +  
Sbjct: 21  NVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISL 80

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
               PNV  +  L++ +CK   + +A  +   M        V  +T +++G  +  +++ 
Sbjct: 81  VNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEE 140

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  ++ +M + G  PN  +Y +LI    +    + AF     +   G   D+V +  L+D
Sbjct: 141 AKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMD 200

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE---A 390
            L K G  ++A D++  LLE  LVP+  T+ +L+   C  G  +    L+  +E +    
Sbjct: 201 GLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFP 260

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           +++VY++++  + K G  N+A+ +   M+ +   P+ + +  L+ G   A +   A++++
Sbjct: 261 NVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLF 320

Query: 451 Q-----GIVMNNPAVNAHV------------------------------HTAIVDRLIEA 475
           +     G+  NN  +++ V                              +T+++D   +A
Sbjct: 321 KEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKA 380

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
           G+   A  + +    +    DVV+Y V I GL + G+  E+   ++ M+ + + P++ T+
Sbjct: 381 GKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATF 439

Query: 536 RVMLLSFCKERNIKMVKRLLQDV 558
             M+ ++CKE N+    +LL ++
Sbjct: 440 NTMINAYCKEGNLGNALKLLNEM 462



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/433 (21%), Positives = 191/433 (44%), Gaps = 11/433 (2%)

Query: 136 GMVLEAFDEMGRF---GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIAL 192
           G++ EA D M +       PN F    ++D  FK  +  + + + KE +       N  +
Sbjct: 276 GLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVI 335

Query: 193 ----CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
                NL +   +    ++   M+ +G  P+   +  +++ F K G+ ++A+ +   M  
Sbjct: 336 DSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTE 395

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
             +   V A+ VLI+G  +L + +   +    M Q G +P+  T+ ++I  + +      
Sbjct: 396 KSSGFDVVAYNVLINGLFKLGKYESESF-HTGMRQLGLAPDSATFNTMINAYCKEGNLGN 454

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A   L+ ++S G  P+ +  N+L+  L   G  +  +D+ + +L +   P   T  ++L 
Sbjct: 455 ALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLD 514

Query: 369 TVCLSGRFSLL---PKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
               S R  ++      + G+ V+ DL  YN L+S FC+ G   +A  ++  M+ KG   
Sbjct: 515 ASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILA 574

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           D  ++  L+ G C +  + +A  V+  ++    + N   +  ++  L  A    +A  L 
Sbjct: 575 DIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLV 634

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
            +        +  +Y + + G  + G  +E   LY +M      P   TY V++  F K 
Sbjct: 635 NQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKG 694

Query: 546 RNIKMVKRLLQDV 558
           + +   K L+Q++
Sbjct: 695 KKMSQAKELMQEM 707



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 101/423 (23%), Positives = 192/423 (45%), Gaps = 8/423 (1%)

Query: 129 YWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPN 184
           Y++ +  G+ L+ F EM   G   N F  +  ++ L + GR++   ++ K+      LP+
Sbjct: 307 YFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPD 366

Query: 185 FLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLG 244
            +++   +    K    S+  ++   M  K    +V  + +L+N   K+G+  E+     
Sbjct: 367 RVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHT 425

Query: 245 LMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
            M  LG +     +  +I+ + +   L  A  L  +M   G  PN +T   L++    A 
Sbjct: 426 GMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAG 485

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
                   L+ +   G  P    H  ++D  SK    D  L  +D L+ + +  D  T+ 
Sbjct: 486 EIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYN 545

Query: 365 SLLSTVCLSG---RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
           +L+ST C  G   R +L+ K + G  + AD++ YNAL+  +C +    +A  +++ ML +
Sbjct: 546 TLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTE 605

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
           G +P+  ++  LL GL  AR I EA  +   +       NA  +  +V    + G   + 
Sbjct: 606 GVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKEC 665

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
           ++L+   I + +     +Y V I    +G +  +A  L  +M+   +PPN+ TY +++  
Sbjct: 666 VKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICG 725

Query: 542 FCK 544
           + K
Sbjct: 726 WYK 728



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/379 (23%), Positives = 179/379 (47%), Gaps = 5/379 (1%)

Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
           +V  F +L++ +C+ G I+ A +LL  M T G +  +  +  L++GF ++  L  A  L 
Sbjct: 16  SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLM 75

Query: 279 EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
            ++      PNV+TYT+LI  + +++    A    D +  +   PD+V +  +++ L K 
Sbjct: 76  GEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKS 135

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVV 394
           G  ++A  V+  + E+ +VP+ +++ +L+ ++   G     F L  ++V    +  D+VV
Sbjct: 136 GKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVV-RGIGFDVVV 194

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           Y AL+    KAG  N A  ++  +L++   P+  ++  L+ G C    +++   + Q + 
Sbjct: 195 YTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEME 254

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
             +   N  V+++IVD   + G  ++A+ + R+ +      +V  Y   I G  +  +  
Sbjct: 255 EKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRG 314

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLT 574
            A  L+ +MK   +  N +     + +  +   ++    L +D++   +  D      + 
Sbjct: 315 IALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMM 374

Query: 575 KFIFKFHSSSSAVNQLVEM 593
              FK    S A N   EM
Sbjct: 375 DGFFKAGKESDAFNIAQEM 393



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 75/308 (24%), Positives = 144/308 (46%), Gaps = 10/308 (3%)

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLND 200
           M + G  P++   N +++   K G +   +K+L E +     PN ++ NI +  LC   +
Sbjct: 427 MRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGE 486

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
           +    D++  M+  GF+P     + +L+   K  R          ++ +G  L ++ +  
Sbjct: 487 IEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNT 546

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           LI  F RL  +  A  +++ M+  G   +++TY +LI G+  +     AF+    + +EG
Sbjct: 547 LISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEG 606

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
            +P++  +N+L+  LS      +A  + + + E  LVP++ T+  L+S     G      
Sbjct: 607 VSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECV 666

Query: 381 KLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
           KL C +  +        YN L+S F K    +QA +L   M  +G  P++ ++  L   +
Sbjct: 667 KLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDIL---I 723

Query: 438 CGARKIDE 445
           CG  K+ +
Sbjct: 724 CGWYKLSK 731



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 101/215 (46%)

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
           E+   +  +N L+  +C+ G  ++AV+L   M  +G  PD  ++  L+ G C    +  A
Sbjct: 12  EIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTA 71

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
             +   I + N   N   +T ++D   ++     A+ ++    V+    DVV+YT  + G
Sbjct: 72  KKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNG 131

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           L + G+ EEA  ++ +M+ + V PN ++Y  ++ S  KE N+     L   ++   I  D
Sbjct: 132 LCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFD 191

Query: 567 YHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
                 L   +FK   +++A +    +    L+P+
Sbjct: 192 VVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPN 226


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 107/430 (24%), Positives = 196/430 (45%), Gaps = 7/430 (1%)

Query: 147 RFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVS 202
           + G  P+T     ++  L   G++   +    K++ E   PN +++   +  LCK+ +  
Sbjct: 137 KLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSR 196

Query: 203 NVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLI 262
               ++  MV+K   PNV  +  +++C  K  ++ EA  +   MI  G S +V+ +  +I
Sbjct: 197 AAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSII 256

Query: 263 DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
            G  +         L  +MV +   PNVV +T+L+    +  M +IA   +D++   G  
Sbjct: 257 HGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVE 316

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LL 379
           PD+V +  L+D        D+A  V+D ++     P+  ++ +L++  C   R      L
Sbjct: 317 PDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYL 376

Query: 380 PKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
            + +C  E+  ++V YN L+   C  G    A+ L++ M+  G  PD  ++  LL  LC 
Sbjct: 377 FEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCK 436

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
            R +D+A+ + + I  +N A +   +  ++D +   G    A  LF     +    DV +
Sbjct: 437 TRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWT 496

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           YT+ I GL   G   EA  L+ +M      P+  TY ++   F +        +LLQ+++
Sbjct: 497 YTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEML 556

Query: 560 DARIELDYHT 569
                 D  T
Sbjct: 557 GRGFSADAST 566



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 101/425 (23%), Positives = 198/425 (46%), Gaps = 4/425 (0%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+ + F   L ++  +   S V  +   M   G   +V    I++N FC + R+   + +
Sbjct: 72  PSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSV 131

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           L  +  LG       +T LI G     ++  A +L++KMV  G  PN VTY +LI G  +
Sbjct: 132 LAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCK 191

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
                 A   L  +  +   P+++ +N +IDCL K    ++AL+++  ++   + P+  T
Sbjct: 192 VGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVST 251

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
           + S++  +C    +  +  L+  +   ++  ++V++  L+   CK G    A  + + M+
Sbjct: 252 YNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMI 311

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
            +G  PD  ++  L+ G C   ++DEA  V+  +V    A N   ++ +++   +  R  
Sbjct: 312 QRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRID 371

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
           KA+ LF      +   ++V+Y   I GL   GR  +A  L+ +M      P+  TYR++L
Sbjct: 372 KAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILL 431

Query: 540 LSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLI 599
              CK R++     +L+ +  + +  D  +   +   + +     +A +    + + GL 
Sbjct: 432 DYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLH 491

Query: 600 PDEMW 604
           PD +W
Sbjct: 492 PD-VW 495



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 108/462 (23%), Positives = 211/462 (45%), Gaps = 9/462 (1%)

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           ++ ++ ++G      TF   +R        G  L  FD+M   GF PN      ++  L 
Sbjct: 131 VLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLC 190

Query: 166 KIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
           K+G     I++L+    +   PN +++N  +  L K   V+   ++   M+ KG  PNV 
Sbjct: 191 KVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVS 250

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            +  +++  CK         L+  M+      +V  +T L+D   +   + +A  + + M
Sbjct: 251 TYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVM 310

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
           +Q G  P+VVTYT+L+ G         A    D +  +G AP+++ ++ LI+   K+   
Sbjct: 311 IQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRI 370

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF----SLLPKLVCGLEVEADLVVYNA 397
           D A+ +++ + + +LVP+  T+ +L+  +C  GR     +L  ++V   ++  DLV Y  
Sbjct: 371 DKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQI-PDLVTYRI 429

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
           LL Y CK    +QA+ +   +      PD  S+  ++ G+C   +++ A +++  +    
Sbjct: 430 LLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKG 489

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAY 517
              +   +T +++ L   G   +A +LFR    +    D  +Y +  RG L    T  A 
Sbjct: 490 LHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAI 549

Query: 518 ILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
            L  +M       +A T  +++     +   + VK++L + +
Sbjct: 550 QLLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQILHEFV 591



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/369 (21%), Positives = 147/369 (39%), Gaps = 3/369 (0%)

Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
           I EA      M+ +    SV  +  ++     ++       L ++M   G   +V T   
Sbjct: 55  IDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAI 114

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           +I  F         FS L  +   GH PD      LI  L   G   +AL ++D ++   
Sbjct: 115 VINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEG 174

Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAV 412
             P+  T+ +L+  +C  G      +L+  +     E +++ YN ++    K    N+A+
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEAL 234

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
            +++ M+ KG +P+  ++  ++ GLC   +      +   +V +    N  + T +VD L
Sbjct: 235 NIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDAL 294

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
            + G    A  +    I      DVV+YT  + G       +EA  ++  M      PN 
Sbjct: 295 CKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNV 354

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVE 592
            +Y  ++  +CK + I     L +++    +  +  T   L   +        A+    E
Sbjct: 355 ISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHE 414

Query: 593 MCNLGLIPD 601
           M   G IPD
Sbjct: 415 MVASGQIPD 423


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 89/380 (23%), Positives = 190/380 (50%), Gaps = 3/380 (0%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+F++ N+ +    +L  +     V   +++KG++P+   F IL+   C  G + +A   
Sbjct: 91  PDFITCNLLMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYF 150

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
              ++  G  L   ++  LI+G  R+     A  L  ++      PNVV Y+++I    +
Sbjct: 151 HDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCK 210

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
            K+ + AF     + S+  +PD+V ++ LI     +G    A+D+++ ++   + P+ YT
Sbjct: 211 DKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYT 270

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
           F  L+   C  G+      ++  +    V+ D+V YN+L+  +C     N+A  L+N M 
Sbjct: 271 FSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMA 330

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
            +G TPD +S+  ++ G C  + +DEA+ +++ +       N   + ++VD L ++GR  
Sbjct: 331 QRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTS 390

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
            A++L         P ++++Y   +  + +    ++A +L +++K   + P+ +TY V++
Sbjct: 391 CALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLI 450

Query: 540 LSFCKERNIKMVKRLLQDVI 559
              CK   +   +++ +D++
Sbjct: 451 NGLCKVGRLDDAQKVFEDLL 470



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 110/450 (24%), Positives = 221/450 (49%), Gaps = 46/450 (10%)

Query: 119 AQTFLLFLR-IYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL 177
           A TF + ++ +  +GE++   L   D++   GF  +  +   +++ L ++G     +++L
Sbjct: 128 AVTFTILIKGLCLKGEVHK-ALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLL 186

Query: 178 KETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKM 233
           +        PN + ++  + ++CK   V++  D+   MV K   P+V  +  L++ FC +
Sbjct: 187 RRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVV 246

Query: 234 GRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTY 293
           G++  A  L   MI+   + +V  +++LIDGF +  ++  A  +   M++     +VVTY
Sbjct: 247 GKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTY 306

Query: 294 TSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE 353
            SL+ G+   K  + A S  +++   G  PD+  ++++I+   K+   D+A+ +++ +  
Sbjct: 307 NSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHC 366

Query: 354 LKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQ 410
            ++ P+  T+ SL+  +C SGR S   +LV  +      ++++ YN++L   CK    ++
Sbjct: 367 KQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDK 426

Query: 411 AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
           A+ L   + +KG  PD +++  L+ GLC                                
Sbjct: 427 AIVLLTKIKEKGIQPDIFTYTVLINGLC-------------------------------- 454

Query: 471 RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
              + GR   A ++F   +V+ Y  ++ +YT  I G    G  +E   + S+MK     P
Sbjct: 455 ---KVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIP 511

Query: 531 NAYTYRVMLLS-FCKERNIKMVKRLLQDVI 559
           NA TY +++ S F K+ N K  ++LL+++I
Sbjct: 512 NAITYEILIHSLFEKDENDK-AEKLLREMI 540



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 96/384 (25%), Positives = 186/384 (48%), Gaps = 16/384 (4%)

Query: 79  YFHD---VQSFD-HMISVVTRLTG--RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRG 132
           YFHD    Q F    +S  T + G  R    +  V  L RV   +     +++  I    
Sbjct: 149 YFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSM 208

Query: 133 EMYGMVLEAFD---EMGRFGFTPNTFARNIVMDVLFKIGR----VDLGIKVLKETQLPNF 185
               +V +AFD   EM     +P+    + ++     +G+    VDL  +++ +   PN 
Sbjct: 209 CKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNV 268

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGL 245
            +F+I +   CK   V   K+V+ +M++K    +V  +  L++ +C + ++ +A  L  +
Sbjct: 269 YTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNV 328

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           M   G +  V +++++I+GF +++ +D A  L+E+M      PNVVTY SL+ G  ++  
Sbjct: 329 MAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGR 388

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
            S A   +D +   G   +++ +N ++D + K    D A+ +   + E  + PD +T+  
Sbjct: 389 TSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTV 448

Query: 366 LLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
           L++ +C  GR     K+   L V+    ++  Y +L++ FC  GF ++ + + + M D G
Sbjct: 449 LINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNG 508

Query: 423 FTPDNYSFVGLLRGLCGARKIDEA 446
             P+  ++  L+  L    + D+A
Sbjct: 509 CIPNAITYEILIHSLFEKDENDKA 532



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 4/151 (2%)

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCN 194
           LE  DEM   G   N    N ++D + K   VD  I    K+ ++   P+  ++ + +  
Sbjct: 393 LELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLING 452

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           LCK+  + + + V   ++ KG+ PN+  +  L+N FC  G   E   +L  M   G   +
Sbjct: 453 LCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPN 512

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
              + +LI         D A  L  +M+  G
Sbjct: 513 AITYEILIHSLFEKDENDKAEKLLREMIARG 543


>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
          Length = 754

 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 125/549 (22%), Positives = 233/549 (42%), Gaps = 16/549 (2%)

Query: 75  KQRDYFHDVQSFDHMISVVTR--------LTGRFETVRGIVGELARVGCVIKAQTFLLFL 126
           K  D F+ ++    M +VVT          T   +    ++ ++   G      T+   +
Sbjct: 171 KAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLI 230

Query: 127 RIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL---- 182
             Y    M+   +  F EM      P+    N  M  L K GR+     +     L    
Sbjct: 231 HGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPK 290

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+ +S+   L        ++ + ++  +MV +G  P+  +F  L+N + ++G + ++  +
Sbjct: 291 PDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLM 350

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
              M   G +  +  ++ +I  F RL RLD A   +  M+  G  P+   Y+ LI+G   
Sbjct: 351 FEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCN 410

Query: 303 AKMFSIAFSFLDMLESEGHAPDLV-FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
            +    A   +  + S+G  P  + F   +I+ L K G   +  DV D ++     P+  
Sbjct: 411 RRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLI 470

Query: 362 TFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           TF SL+   CL G       L+  +E   VE D+  YN L+  +CK G  + A+ L+  M
Sbjct: 471 TFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDM 530

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
           L K  T  + S+  +L GL  AR+   A  ++  ++ +  AV+ H +  ++  L      
Sbjct: 531 LHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCT 590

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            +A  L  +        D++++ + IR + + GR +EA  L++ +    + P   TYRVM
Sbjct: 591 DEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVM 650

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGL 598
           + +  KE + +    L   +  +    D      + + +      + A N L ++   G+
Sbjct: 651 ITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGI 710

Query: 599 IPDEMWRKL 607
           +P+     L
Sbjct: 711 LPEATTTSL 719



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 114/546 (20%), Positives = 215/546 (39%), Gaps = 81/546 (14%)

Query: 136 GMVLEAFDEMGRFG---FTPNTFARNIVMDVLFKIGRVDLGIKV----LKETQLPNFLSF 188
            + +E F  M R       P  +  NI+++   +  R DLG+ V    L+    P+  S+
Sbjct: 97  ALAVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSY 156

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           N  +    K  +V    D+   M  +G  PNV  +  L+N  CK   + +A ++L  M+ 
Sbjct: 157 NALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVG 216

Query: 249 LGTSLSVNAWTVLIDGFR-----------------------------------RLRRLDM 273
            G   +   +  LI G+                                    +  R+  
Sbjct: 217 AGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKE 276

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  +++ MV  G  P+V++Y +L+ G+  A   +   +  +++  EG  PD    N LI+
Sbjct: 277 ARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLIN 336

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF----------------- 376
             +++G  D +L +++ + +  + PD  TF +++S  C  GR                  
Sbjct: 337 AYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPP 396

Query: 377 --SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK------------- 421
             ++   L+ G     DLV    L+S     G P   +K + ++++              
Sbjct: 397 DTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDV 456

Query: 422 -------GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
                  G  P+  +F  L+ G C    + EA+ +   +       + + +  +VD   +
Sbjct: 457 VDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCK 516

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
            GR   A+ LFR  + ++  L  VSY + + GL +  RT  A  ++ +M    +  + +T
Sbjct: 517 HGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHT 576

Query: 535 YRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMC 594
           Y  +L   C+         LL+ +    ++ D  T   + + +FK      A      + 
Sbjct: 577 YATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAIS 636

Query: 595 NLGLIP 600
             GL+P
Sbjct: 637 TYGLVP 642



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/248 (20%), Positives = 103/248 (41%), Gaps = 8/248 (3%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF----LSFNIALCNLCK 197
            D M   G  P+ +  N ++D   K GR+D  + + ++          +S+NI L  L +
Sbjct: 492 LDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQ 551

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
                  K++   M+  G   ++  +  +L   C+     EA  LL  + ++     +  
Sbjct: 552 ARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILT 611

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           + ++I    ++ R   A  L+  +   G  P ++TY  +I   ++ + F  A +    +E
Sbjct: 612 FNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSME 671

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF- 376
                PD    N +I  L   G    A +    + +  ++P++ T   L+    ++G++ 
Sbjct: 672 KSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYR 731

Query: 377 ---SLLPK 381
               LLP+
Sbjct: 732 EYIKLLPE 739


>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/420 (23%), Positives = 195/420 (46%), Gaps = 6/420 (1%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK---IGRVDLGIKVLKETQLPNFLS 187
           R   Y   L   + M   G+TP+      ++   F    IG+    +++L+    P+  +
Sbjct: 81  RAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYGKPDVFA 140

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           +N  +    K N + N   V+  M  +GF P+V  + I++  FC  G++  A ++   ++
Sbjct: 141 YNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELL 200

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
                 +V  +T+LI+       +D+A  L ++M+  G  P+ +TY ++I+G  +  M  
Sbjct: 201 KDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVD 260

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            AF  L  L S G  PD++ +N+L+  L   G + +   +   ++ +   P+  T   L+
Sbjct: 261 KAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILI 320

Query: 368 STVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
            T+C  G+      L+  ++   ++ D   Y+ L++ FC+ G  + A +    M+  G  
Sbjct: 321 GTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCL 380

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           PD  ++  ++ GLC   K D+A+ V++ +       N   +  +   L  +G  ++A+++
Sbjct: 381 PDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEM 440

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
             + + +    D ++Y   I  L   G  +EA  L   M+     PN  +Y ++LL  CK
Sbjct: 441 ILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCK 500



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 168/371 (45%), Gaps = 10/371 (2%)

Query: 75  KQRDYFHDVQSFDHMI-SVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGE 133
           K R +  DV +++ MI S  +R  G+ +    I  EL +  C     T+ + +       
Sbjct: 165 KSRGFLPDVVTYNIMIGSFCSR--GKLDLALEIFEELLKDNCEPTVITYTILIEATILDG 222

Query: 134 MYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFN 189
              + ++  DEM   G  P+T   N ++  + K   VD   ++L+        P+ +++N
Sbjct: 223 GIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYN 282

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
           I L  L      S  + +I  M+  G  PNV    IL+   C+ G++ EA  LL  M   
Sbjct: 283 ILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEK 342

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           G       +  LI GF R  RLD+A    E M+ +GC P++V Y +++ G         A
Sbjct: 343 GLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQA 402

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
               + L+  G  P++  +N L   L   G    AL++   LL   + PD  T+ SL+S 
Sbjct: 403 LEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISC 462

Query: 370 VCLSGRFSLLPKLVCGLEV---EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
           +C  G      +L+  ++      ++V YN +L   CK    N A+++   M +KG  P+
Sbjct: 463 LCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPN 522

Query: 427 NYSFVGLLRGL 437
             +++ L+ G+
Sbjct: 523 ETTYILLIEGI 533



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/410 (23%), Positives = 197/410 (48%), Gaps = 8/410 (1%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV +++ +IS   +   + E    ++  +   G +    T+ + +  +       + LE 
Sbjct: 137 DVFAYNALISGFIK-ANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEI 195

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
           F+E+ +    P      I+++     G +D+ +K+L E       P+ L++N  +  +CK
Sbjct: 196 FEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCK 255

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              V    +++  +  +G  P++  + ILL      G+ +E  +L+  MI++G   +V  
Sbjct: 256 EMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVT 315

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
            ++LI    R  +++ A  L   M + G  P+   Y  LI GF       +A  FL+ + 
Sbjct: 316 HSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMI 375

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG-RF 376
           S+G  PD+V +N ++  L + G  D AL+V++ L E+   P+  ++ +L S +  SG R+
Sbjct: 376 SDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRY 435

Query: 377 SLLPKLVCGLE--VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
             L  ++  L   ++ D + YN+L+S  C+ G  ++A++L   M    + P+  S+  +L
Sbjct: 436 RALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIIL 495

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
            GLC   + ++AI V   +       N   +  +++ +  +G   +A++L
Sbjct: 496 LGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMEL 545



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 106/438 (24%), Positives = 189/438 (43%), Gaps = 52/438 (11%)

Query: 184 NFLSFNIALCNLCKLNDVSNVKDV----IGMMVRKGFYPNVRMFEI----LLNCFCKMGR 235
           N L   I  C   +LND + V++     +    R+    +    E+    LLN  C+ G+
Sbjct: 25  NSLHSTIVSCIRPELNDANKVRNPQKVRVSAETRQTHVLSFDFKEVHLMKLLNRSCRAGK 84

Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
             E+   L  M+  G +  V   T LI GF   R +  A  + E + + G  P+V  Y +
Sbjct: 85  YNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG-KPDVFAYNA 143

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           LI GF++A     A   LD ++S G  PD+V +N++I      G  D AL++++ LL+  
Sbjct: 144 LISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDN 203

Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAV 412
             P   T+  L+    L G   +  KL+  +    +E D + YNA++   CK    ++A 
Sbjct: 204 CEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAF 263

Query: 413 KLYNTMLDKGFTPDNYSFVGLLR-----------------------------------GL 437
           +L  ++  +G  PD  ++  LLR                                    L
Sbjct: 264 ELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTL 323

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
           C   K++EA+N+ + +       +A+ +  ++      GR   A +     I +    D+
Sbjct: 324 CRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDI 383

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE----RNIKMVKR 553
           V+Y   + GL   G+ ++A  ++ ++  +  PPN  +Y  +  +        R ++M+ +
Sbjct: 384 VNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILK 443

Query: 554 LLQDVIDARIELDYHTSI 571
           LL   ID   E+ Y++ I
Sbjct: 444 LLNQGIDPD-EITYNSLI 460



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/258 (19%), Positives = 103/258 (39%), Gaps = 4/258 (1%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G++     ++ E+  +GC     T  + +    R       +     M   G  P+ +  
Sbjct: 292 GKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCY 351

Query: 158 NIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           + ++    + GR+DL  + L+    +  LP+ +++N  +  LC+        +V   +  
Sbjct: 352 DPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDE 411

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G  PNV  +  L +     G    A +++  ++  G       +  LI    R   +D 
Sbjct: 412 VGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDE 471

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L   M      PNVV+Y  ++ G  +    + A   L  +  +G  P+   + +LI+
Sbjct: 472 AIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIE 531

Query: 334 CLSKMGSYDDALDVYDGL 351
            +   G   +A+++ + L
Sbjct: 532 GIGFSGLRAEAMELANSL 549



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/238 (21%), Positives = 93/238 (39%), Gaps = 34/238 (14%)

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ------ 451
           LL+  C+AG  N+++     M+DKG+TPD      L++G   +R I +A  V +      
Sbjct: 75  LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG 134

Query: 452 ------------GIVMNNPAVNAH----------------VHTAIVDRLIEAGRCHKAIQ 483
                       G +  N   NA+                 +  ++      G+   A++
Sbjct: 135 KPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALE 194

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           +F   + +     V++YT+ I   +  G  + A  L  +M    + P+  TY  ++   C
Sbjct: 195 IFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMC 254

Query: 544 KERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           KE  +     LL+ +     + D  T   L + +      S     + EM ++G  P+
Sbjct: 255 KEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPN 312


>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
 gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
          Length = 556

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 112/451 (24%), Positives = 207/451 (45%), Gaps = 15/451 (3%)

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
           LP+ + FN  + ++ K+        ++  MV KG  P++    I +NC+C +G +  A+ 
Sbjct: 81  LPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFS 140

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           +LG+++  G   +    T ++ G      +  A    + +   G   + V Y +LI G  
Sbjct: 141 VLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLC 200

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           +      AF  L  +E +   P++V +N++ID   K      A D+Y  ++++ + PD  
Sbjct: 201 KIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDIL 260

Query: 362 TFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           T+ SL+   C +G++  + +L+C +    +  ++  +N L+  FC+ G   +A  ++N M
Sbjct: 261 TYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLM 320

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
           + +G  PD  +F  L+ G C    + EA  ++  +       +   +T ++    +  R 
Sbjct: 321 VKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRI 380

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            +A+ LF     +   LD+V Y+  I GL + GR   A+ L+S + +   PPN  TY ++
Sbjct: 381 DEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNIL 440

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGL 598
           + +FCK ++I M   L + +    +     T   L     K      A+N L  M +  L
Sbjct: 441 IDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNL 500

Query: 599 IPDEMWRKLGLLSDETMTPVSLFDGFVPCER 629
            PD            ++T  SLFDG     R
Sbjct: 501 APD------------SITYNSLFDGLCKSGR 519



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 181/371 (48%), Gaps = 7/371 (1%)

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCN 194
           ++  D +   G   +      +++ L KIGR     ++L+E +     PN + +N+ + +
Sbjct: 174 MDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDS 233

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
            CK       +D+   +V  G  P++  +  L+  FC+ G+  E  QL+  M+    + +
Sbjct: 234 FCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPN 293

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           V  + VLID F R  ++  A  ++  MV+ G  P++VT+ +LI G         A    D
Sbjct: 294 VYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFD 353

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            +   G  PD+  + +LI    K    D+A+ +++ +    +V D   + SL+  +C SG
Sbjct: 354 TVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSG 413

Query: 375 RFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
           R S   +L   +  +    +++ YN L+  FCK    +  ++L+  M  KG TP   ++ 
Sbjct: 414 RISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYN 473

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            L+ G C +++I EA+N+   +   N A ++  + ++ D L ++GR   A +LF+   V 
Sbjct: 474 ILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVG 533

Query: 492 KYPLDVVSYTV 502
             P+DV +Y V
Sbjct: 534 GPPVDVATYNV 544



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 103/413 (24%), Positives = 192/413 (46%), Gaps = 38/413 (9%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVD-----LGIKVLKETQLPNFLSFNIALCNLCKLNDVSN 203
           G TP+ F  +I ++    +G +      LGI VLK    PN ++    +  LC   +V  
Sbjct: 114 GVTPSIFTLSIWINCYCHLGEMGFAFSVLGI-VLKRGYQPNNITLTTVMKGLCINGEVQK 172

Query: 204 VKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLID 263
             D    +  +G   +   +  L+N  CK+GR  +A+QLL  M       ++  + ++ID
Sbjct: 173 AMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIID 232

Query: 264 GFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP 323
            F +      A  L+ K+V  G  P+++TYTSLI+GF     +      +  + ++   P
Sbjct: 233 SFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINP 292

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV 383
           ++   NVLID   + G   +A  +++ +++    PD  TF +L+S  CL G         
Sbjct: 293 NVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHG--------- 343

Query: 384 CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
                       N L           +A KL++T+ ++G  PD +S+  L+ G C  ++I
Sbjct: 344 ------------NVL-----------EARKLFDTVFERGILPDVWSYTILIIGYCKCKRI 380

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           DEA++++  +   N  ++  ++++++D L ++GR   A +LF     +  P +V++Y + 
Sbjct: 381 DEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNIL 440

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
           I    +    +    L+  M    + P   TY +++  +CK + I+    LL 
Sbjct: 441 IDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLS 493



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/350 (25%), Positives = 164/350 (46%), Gaps = 10/350 (2%)

Query: 136 GMVLEAFD---EMGRFGFTPNTFARNIVMDVLFK----IGRVDLGIKVLKETQLPNFLSF 188
           G  ++AF    EM      PN    N+++D   K        DL +K++     P+ L++
Sbjct: 203 GRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTY 262

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
              +   C+      VK ++  MV K   PNV  F +L++ FC+ G++ EA  +  LM+ 
Sbjct: 263 TSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVK 322

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
            G    +  +  LI G      +  A  L++ + + G  P+V +YT LI G+ + K    
Sbjct: 323 RGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDE 382

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A S  + +  +    D+V ++ LID L K G    A +++  +      P+  T+  L+ 
Sbjct: 383 AVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILID 442

Query: 369 TVCLSGRFSL---LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
             C      +   L KL+CG  +   ++ YN L++ +CK+    +A+ L + M  K   P
Sbjct: 443 AFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAP 502

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
           D+ ++  L  GLC + +I +A  +++ + +  P V+   +  ++D   +A
Sbjct: 503 DSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKA 552



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 79/292 (27%), Positives = 137/292 (46%), Gaps = 7/292 (2%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKV 176
           T+   +R + R   +G V +   EM      PN +  N+++D   + G++     +   +
Sbjct: 261 TYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLM 320

Query: 177 LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
           +K  Q P+ ++FN  +   C   +V   + +   +  +G  P+V  + IL+  +CK  RI
Sbjct: 321 VKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRI 380

Query: 237 AEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSL 296
            EA  L   M      L +  ++ LIDG  +  R+  A  L+  +  +G  PNV+TY  L
Sbjct: 381 DEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNIL 440

Query: 297 IKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
           I  F + +   +      ++  +G  P ++ +N+LI+   K     +A+++   +    L
Sbjct: 441 IDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNL 500

Query: 357 VPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV---EADLVVYNALLSYFCKA 405
            PDS T+ SL   +C SGR S   +L   + V     D+  YN LL  FCKA
Sbjct: 501 APDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKA 552



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 104/233 (44%), Gaps = 5/233 (2%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
           +R    D+ +F+ +IS    L G     R +   +   G +    ++ + +  Y + +  
Sbjct: 322 KRGQQPDIVTFNTLISGHC-LHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRI 380

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIA 191
              +  F+EM       +    + ++D L K GR+    ++      +   PN +++NI 
Sbjct: 381 DEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNIL 440

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           +   CK+ D+    ++  +M  KG  P V  + IL+N +CK  RI EA  LL +M +   
Sbjct: 441 IDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNL 500

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
           +     +  L DG  +  R+  A  L++ M   G   +V TY  L+  F +A+
Sbjct: 501 APDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQ 553



 Score = 40.4 bits (93), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 4/121 (3%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET 180
           T+ + +  + + +   M +E F  M   G TP     NI+++   K  R+   + +L   
Sbjct: 436 TYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVM 495

Query: 181 Q----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
           Q     P+ +++N     LCK   +S+  ++  +M   G   +V  + +LL+ FCK   +
Sbjct: 496 QSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQDV 555

Query: 237 A 237
           A
Sbjct: 556 A 556


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 134/583 (22%), Positives = 242/583 (41%), Gaps = 63/583 (10%)

Query: 51  HIVHSTLLNCPSDLIALSFFIWCAKQR---DYFH-------DVQSFDHMISVVTRLTG-- 98
           H +     N    LI+   +  C+K +   D+ H       D +S+   + ++ RL    
Sbjct: 62  HFIEQVSPNLTPALISNVLYNLCSKPQLVSDFIHHLHPHCLDTKSYCLAVVLLARLPSPK 121

Query: 99  ------------RFETVRGIVGEL--ARVGCVIKAQ-TFLLFLRIYWRGEMYGMVLEAFD 143
                       R  T R +  EL  +R    +K+   F L +R+           + F 
Sbjct: 122 LALQLLKQVMGTRIATNRELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFY 181

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLG----IKVLKETQLPNFLSFNIALCNLCKLN 199
            M   G  P     N ++ +  K+ R+++      ++ +        +FNI +  LCK  
Sbjct: 182 MMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEG 241

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
            +   ++ IG M   GF PNV  +  +++ +   G I  A ++L  M   G       + 
Sbjct: 242 KLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYG 301

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
            LI G  +  RL+ A  L++KMV+ G  PN VTY +LI G+        AFS+ D +  +
Sbjct: 302 SLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKK 361

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
           G  P +  +N+L+  L   G   +A D+   + +  ++PD+ T                 
Sbjct: 362 GIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAIT----------------- 404

Query: 380 PKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
                          YN L++ + + G   +A  L+N ML KG  P + ++  L+  L  
Sbjct: 405 ---------------YNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSR 449

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
             ++ EA ++++ I+    + +  +  A+VD     G   +A  L +    +  P D V+
Sbjct: 450 RNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVT 509

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           +   ++G    G+ EEA +L  +MK   + P+  +Y  ++  + +  +IK   R+  +++
Sbjct: 510 FNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEML 569

Query: 560 DARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
                    T   L K + K      A   L EM N G+ PD+
Sbjct: 570 SIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDD 612



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 89/396 (22%), Positives = 180/396 (45%), Gaps = 10/396 (2%)

Query: 83  VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYW-RGEMYGMVLEA 141
           V +F+ M++V+ +  G+ +  R  +G +  +G      ++   +  Y  RG + G     
Sbjct: 227 VYTFNIMVNVLCK-EGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEG-ARRI 284

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCK 197
            D M   G  P+++    ++  + K GR++    L  K+++   +PN +++N  +   C 
Sbjct: 285 LDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCN 344

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
             D+         MV+KG  P+V  + +L++     GR+ EA  ++  M   G       
Sbjct: 345 KGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAIT 404

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           + +LI+G+ R      A  L  +M+  G  P  VTYTSLI           A    + + 
Sbjct: 405 YNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKIL 464

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
            +G +PD++  N ++D     G+ + A  +   +    + PD  TF +L+   C  G+  
Sbjct: 465 DQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVE 524

Query: 378 LLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
               L+  ++   ++ D + YN L+S + + G    A ++ + ML  GF P   ++  L+
Sbjct: 525 EARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALI 584

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
           + LC  ++ D A  + + +V    + +   + ++++
Sbjct: 585 KCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIE 620



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/304 (24%), Positives = 145/304 (47%), Gaps = 9/304 (2%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCK 197
           FD+M   G  PN    N ++D     G ++       +++K+  +P+  ++N+ +  L  
Sbjct: 320 FDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFM 379

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              +    D+I  M +KG  P+   + IL+N + + G   +A+ L   M++ G   +   
Sbjct: 380 EGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVT 439

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T LI    R  R+  A  L+EK++  G SP+V+ + +++ G         AF  L  ++
Sbjct: 440 YTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMD 499

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-- 375
            +   PD V  N L+    + G  ++A  + D +    + PD  ++ +L+S     G   
Sbjct: 500 RKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIK 559

Query: 376 --FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
             F +  +++  +     L+ YNAL+   CK    + A +L   M++KG +PD+ +++ L
Sbjct: 560 DAFRVRDEML-SIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSL 618

Query: 434 LRGL 437
           + G+
Sbjct: 619 IEGM 622


>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1113

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 130/545 (23%), Positives = 244/545 (44%), Gaps = 61/545 (11%)

Query: 61  PSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQ 120
           P+D  A S+F   A+     H  ++ +HM+ ++ R+  R       VG++  V  +++ Q
Sbjct: 104 PTD--AFSYFNSVAEMPFVVHTTETCNHMLEIL-RIHRR-------VGDMVVVFNLMQNQ 153

Query: 121 -------TFLLFLR-IYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDL 172
                  T+L+  + ++ RG +      AF +M   GF  N ++ N ++ +L + G    
Sbjct: 154 IIKRDLNTYLIIFKGLFIRGGLRQTPF-AFGKMREAGFHLNAYSYNGLIHLLLQSGLCRE 212

Query: 173 GIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLN 228
            +++ +   L    P+  +F+  +    K  D   VK ++  M   G  PN+  + I + 
Sbjct: 213 ALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIR 272

Query: 229 CFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSP 288
              + GRI EA +++  M   G    V  +TVLID      +LD A  L+ KM  +   P
Sbjct: 273 VLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKP 332

Query: 289 NVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS-------- 340
           + VTY +++  F +         F   +E++G+APD++   +L++ L K G+        
Sbjct: 333 DRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLL 392

Query: 341 ---------------------------YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
                                       DDALD+++ +  L +VP +YT+   +     S
Sbjct: 393 DVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKS 452

Query: 374 GRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           GR     +    +++     ++V  NA L    + G   +A  ++N +   G  PD+ ++
Sbjct: 453 GRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTY 512

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             +++    A ++DEAI +   +  N    +  V  ++++ L +AGR  +A ++F R   
Sbjct: 513 NMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKD 572

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
            K    VV+Y   I GL + G+ + A  L++ M     PPN  T+  +L   CK   + +
Sbjct: 573 MKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDL 632

Query: 551 VKRLL 555
             ++L
Sbjct: 633 ALKML 637



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 120/470 (25%), Positives = 207/470 (44%), Gaps = 49/470 (10%)

Query: 101 ETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRF---GFTPNTFAR 157
           ETV+ ++ E+  +G      T+ + +R+  R    G + EA   M R    G  P+    
Sbjct: 246 ETVKSLLEEMESLGLKPNIYTYTICIRVLGRA---GRIDEACRIMKRMEDDGCGPDVVTY 302

Query: 158 NIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
            +++D L   G++D    L +K+   +  P+ +++   L       D+  VK+    M  
Sbjct: 303 TVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEA 362

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G+ P+V  F IL+N  CK G I EA+ LL +M   G   +++ +  LI G  R+ RLD 
Sbjct: 363 DGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDD 422

Query: 274 AGYLW-----------------------------------EKMVQNGCSPNVVTYTSLIK 298
           A  L+                                   EKM   G +PN+V   + + 
Sbjct: 423 ALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLY 482

Query: 299 GFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP 358
              E      A    + L+S G APD V +N+++ C SK G  D+A+++   + E +  P
Sbjct: 483 SLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEP 542

Query: 359 DSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLY 415
           D     SL++T+  +GR     K+ C L   ++   +V YN L++   K G   +A++L+
Sbjct: 543 DIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELF 602

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
            +M   G  P+  +F  +L  LC   ++D A+ +   +   N   +      I+  L+  
Sbjct: 603 ASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIE 662

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKH 525
            R   AI LF +      P D V+    + G+++ G  E+A+ +     H
Sbjct: 663 KRVSDAIWLFHQMKKMLTP-DCVTLCTLLPGVVKNGLMEDAFKIAEDFVH 711



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 113/487 (23%), Positives = 212/487 (43%), Gaps = 16/487 (3%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR    + I   L   G    + T+ + ++ Y +       +E   +M      P+    
Sbjct: 488 GRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVI 547

Query: 158 NIVMDVLFKIGRVDLGIKV---LKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N +++ L+K GRVD   K+   LK+ +L P  +++N  +  L K   V    ++   M  
Sbjct: 548 NSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTG 607

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G  PN   F  +L+C CK   +  A ++L  M T+     V  +  +I G    +R+  
Sbjct: 608 NGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSD 667

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL-DMLESEGHAPDLVFHNVLI 332
           A +L+ +M +   +P+ VT  +L+ G ++  +   AF    D +   G   D  F   L+
Sbjct: 668 AIWLFHQM-KKMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLM 726

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF----SLLPKLVCGLEV 388
             +      +  +   D L+  ++  D      ++  +C   +     S+  +    L V
Sbjct: 727 GGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGV 786

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
           +  L  YN L+  F        A  L+  M + G  PD +++  LL     + KI+E   
Sbjct: 787 KPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFE 846

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           +Y+ ++ ++   N   H  I+  L+++    KA+ LF   +   +     +Y   + GLL
Sbjct: 847 LYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLL 906

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI----KMVKRLLQDVIDARIE 564
           + GR EEA  L+ +M      PN   Y +++  F K  ++    ++ KR++++ I  R +
Sbjct: 907 KSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGI--RPD 964

Query: 565 LDYHTSI 571
           L  +TS+
Sbjct: 965 LKSYTSL 971



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/304 (27%), Positives = 153/304 (50%), Gaps = 7/304 (2%)

Query: 137  MVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIAL 192
            M    F EM   G  P+ F  N+++D   K G++    +L  +++  +  PN ++ NI +
Sbjct: 808  MAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIII 867

Query: 193  CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
             NL K N +    D+   +V   F P    +  LL+   K GR+ EA +L   M+  G  
Sbjct: 868  ANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCR 927

Query: 253  LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
             +   + +LI+GF +   ++ A  L+++MV+ G  P++ +YTSL+    EA     A  +
Sbjct: 928  PNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHY 987

Query: 313  LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
             + L+  G   D + +N++ID L +    ++AL +YD +    + PD +T+ SL+  + +
Sbjct: 988  FEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGV 1047

Query: 373  SGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
            +G      KL   L+   +E ++  YNAL+  +  +G  + A  +Y  M+  G +P+  +
Sbjct: 1048 AGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGT 1107

Query: 430  FVGL 433
            F  L
Sbjct: 1108 FAQL 1111



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 145/302 (48%), Gaps = 3/302 (0%)

Query: 249  LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
            LG   ++ ++  LI+GF  +   +MA  L+ +M   GC+P+V TY  L+    ++   + 
Sbjct: 784  LGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINE 843

Query: 309  AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
             F   + +      P+ + HN++I  L K  S D ALD++  L+     P   T+  LL 
Sbjct: 844  LFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLD 903

Query: 369  TVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
             +  SGR     +L   +       +  +YN L++ F K G  N A +L+  M+ +G  P
Sbjct: 904  GLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRP 963

Query: 426  DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
            D  S+  L+  LC A ++D+A++ ++ +      +++  +  ++D L  + R  +A+ L+
Sbjct: 964  DLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLY 1023

Query: 486  RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
                      D+ +Y   I  L   G  E+A  LY +++ I + PN +TY  ++  +   
Sbjct: 1024 DEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMS 1083

Query: 546  RN 547
             N
Sbjct: 1084 GN 1085



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 97/442 (21%), Positives = 195/442 (44%), Gaps = 12/442 (2%)

Query: 138  VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALC 193
             +E F  M   G  PNT   N ++D L K   VDL +K+L +      +P+ L+FN  + 
Sbjct: 598  AMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIH 657

Query: 194  NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI-TLGTS 252
             L     VS+   +   M +K   P+      LL    K G + +A+++    +  LG  
Sbjct: 658  GLVIEKRVSDAIWLFHQM-KKMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVY 716

Query: 253  LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS- 311
            +    W  L+ G       +      +++V      +      +IK   + K   +A S 
Sbjct: 717  VDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSV 776

Query: 312  FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
            F+   +  G  P L  +N LI+    + + + A +++  +      PD +T+  LL    
Sbjct: 777  FIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHG 836

Query: 372  LSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
             SG+    F L  +++C    + + + +N +++   K+   ++A+ L+  ++   F+P  
Sbjct: 837  KSGKINELFELYEQMICS-SCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTP 895

Query: 428  YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
             ++  LL GL  + +++EA  +++ +V      N  ++  +++   + G  + A +LF+R
Sbjct: 896  CTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKR 955

Query: 488  AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN 547
             + E    D+ SYT  +  L E GR ++A   + ++K   +  ++  Y +M+    +   
Sbjct: 956  MVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHR 1015

Query: 548  IKMVKRLLQDVIDARIELDYHT 569
            I+    L  ++    I  D  T
Sbjct: 1016 IEEALTLYDEMQSRGINPDLFT 1037



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 84/330 (25%), Positives = 138/330 (41%), Gaps = 45/330 (13%)

Query: 171  DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCF 230
            +LG+K       P   S+N  +     +++     ++   M   G  P+V  + +LL+  
Sbjct: 783  ELGVK-------PTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAH 835

Query: 231  CKMGRIAEAYQLLGLMI----------------TLGTSLSVN------------------ 256
             K G+I E ++L   MI                 L  S S++                  
Sbjct: 836  GKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTP 895

Query: 257  -AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
              +  L+DG  +  RL+ A  L+E+MV  GC PN   Y  LI GF +    + A      
Sbjct: 896  CTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKR 955

Query: 316  LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
            +  EG  PDL  +  L+ CL + G  DDAL  ++ L +  L  DS  +  ++  +  S R
Sbjct: 956  MVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHR 1015

Query: 376  FSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
                  L   ++   +  DL  YN+L+     AG   QA KLY  +   G  P+ +++  
Sbjct: 1016 IEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNA 1075

Query: 433  LLRGLCGARKIDEAINVYQGIVMNNPAVNA 462
            L+RG   +   D A  VY+ +++   + N 
Sbjct: 1076 LIRGYSMSGNSDSAYAVYKRMMVGGCSPNT 1105


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 126/466 (27%), Positives = 211/466 (45%), Gaps = 34/466 (7%)

Query: 83  VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF 142
           +Q+ + ++ V+ + TGRFE +  I  E+   G      TF   +    R        E F
Sbjct: 147 IQACNVLLYVLVK-TGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMF 205

Query: 143 DEMGRFGFTPNTFARNIVMDVLF---KIGRVDLGIKVLKETQL-PNFLSFNIALCNLCKL 198
           DEM   G  P      I++  L    KI   +   + ++E  + PN  ++N  +   CKL
Sbjct: 206 DEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKL 265

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
            +      +   M+ +G  P+V  F IL++  CK G +  A  L   MI    + ++  +
Sbjct: 266 ANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVY 325

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
             LID + ++  +  A  L+ ++ +   SP+V TY+ LI+G         A +  + +  
Sbjct: 326 NSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTK 385

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC----LSG 374
           EG   + V +N LID   K G  D AL++   + E  + P+  TF +L+   C    L  
Sbjct: 386 EGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQA 445

Query: 375 RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
              +  ++V    +  D+V Y A++   CK G   +A+KLY+ MLD G TP+ Y+   LL
Sbjct: 446 AMGIYSEMVIK-SLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLL 504

Query: 435 RGLCGARKIDEAINVY-QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
            GLC   KI +A+ ++ + I    P  N           ++AG    ++           
Sbjct: 505 DGLCKDGKISDALELFTEKIEFQTPRCN-----------VDAGGSKPSLT---------- 543

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
             + V+YT  I GL + G+  +A  L+S M+   + P+   Y VML
Sbjct: 544 --NHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVML 587



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 139/576 (24%), Positives = 241/576 (41%), Gaps = 42/576 (7%)

Query: 48  LAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIV 107
           L P  + +T+LNC S   AL FF    ++     ++Q +  +I V+   +      R ++
Sbjct: 28  LTPDSLITTVLNCRSPWKALEFFNAAPEK-----NIQLYSAIIHVLVG-SKLLSHARYLL 81

Query: 108 GELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFG---FTPNTFARNIVMDVL 164
            +L         Q  +   + Y   ++      AF E+ R     FTPN +   I+  VL
Sbjct: 82  NDLV--------QNLVKSHKPYHACQL------AFSELSRLKSSKFTPNVYGELII--VL 125

Query: 165 FKIGRVDLGIKVLKETQLP-NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMF 223
            K+  V+  + +  +        + N+ L  L K      +  +   M+  G  P+V  F
Sbjct: 126 CKMELVEEALSMYHKVGAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITF 185

Query: 224 EILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQ 283
             L++  C+ G +  A ++   M   G   +V  +T+LI G     +++ A  +   M +
Sbjct: 186 GTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMRE 245

Query: 284 NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
            G  PNV TY +L+ G+ +      A      +  EG  PD+V   +LID L K G    
Sbjct: 246 VGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKA 305

Query: 344 ALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLS 400
           A +++  +++  + P+   + SL+   C  G  S    L   LE   V  D+  Y+ L+ 
Sbjct: 306 ARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIR 365

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
             C      +A  ++  M  +G   ++ ++  L+ G C   K+D+A+ +   +  N    
Sbjct: 366 GLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEP 425

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
           N    + ++D   +      A+ ++   +++    DVV+YT  I G  + G  +EA  LY
Sbjct: 426 NVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLY 485

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID---ARIELDYHTS------- 570
           S M    + PN YT   +L   CK+  I     L  + I+    R  +D   S       
Sbjct: 486 SDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNH 545

Query: 571 IRLTKFIFKFHSS---SSAVNQLVEMCNLGLIPDEM 603
           +  T  I         S AV    +M   GL PDE+
Sbjct: 546 VAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEV 581



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 179/416 (43%), Gaps = 44/416 (10%)

Query: 61  PSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETV-------RGIVGE---- 109
           PS +   +    C +Q D     + FD M     R+ G   TV       RG+  +    
Sbjct: 180 PSVITFGTLIDGCCRQGDLLRAQEMFDEM-----RVKGIVPTVIVYTILIRGLCSDNKIE 234

Query: 110 --------LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVM 161
                   +  VG      T+   +  Y +       L  + +M   G  P+     I++
Sbjct: 235 EAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILI 294

Query: 162 DVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFY 217
           D L K G +    +L + ++K +  PN   +N  +   CK+ DVS    +   + R    
Sbjct: 295 DGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVS 354

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
           P+V  + IL+   C + R  EA  +   M   G   +   +  LIDG  +  ++D A  +
Sbjct: 355 PDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEI 414

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
             +M +NG  PNV+T+++LI G+ + +    A      +  +  +PD+V +  +ID   K
Sbjct: 415 CSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCK 474

Query: 338 MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV----------CGLE 387
            GS  +AL +Y  +L+  + P+ YT   LL  +C  G+ S   +L           C ++
Sbjct: 475 YGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVD 534

Query: 388 VEA------DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
                    + V Y AL+   C+ G  ++AVKL++ M   G  PD   +V +LRGL
Sbjct: 535 AGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGL 590


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 115/478 (24%), Positives = 209/478 (43%), Gaps = 12/478 (2%)

Query: 134 MYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFN 189
           M   V++ + ++ R G  PN    N V++ L K G V     +  KV K    P+  ++ 
Sbjct: 208 MTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYT 267

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
             +   C+  D+ +  ++   M  +G  PN   +  L+N  C  GR+ EA   +  M   
Sbjct: 268 SMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRH 327

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           G   +V+ +T  I     + R++ A  ++  M + GC PNV TYTSLI G   ++M   A
Sbjct: 328 GVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRM---A 384

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
                 +  +G  P+ V +N L++ L +    D AL V++ + +   +P++ ++  L+  
Sbjct: 385 IGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRG 444

Query: 370 VCLSG----RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
            C  G      S+L  ++ G      LV YN ++  +C +G  + A+++   M   G  P
Sbjct: 445 YCTIGDTEKAMSMLTNMLKGRPTPT-LVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQP 503

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           D +S+  L+ G C   K++ A  ++  ++      N   +TA++    +  +   A ++ 
Sbjct: 504 DEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARML 563

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
            R        +V +Y V I GL +      A  L   M    + P+  TY  ++   C  
Sbjct: 564 ERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNN 623

Query: 546 RNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
             I +   +   ++      + HT   L + + +      A     E+   GLIPDE+
Sbjct: 624 GAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEV 681



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 136/586 (23%), Positives = 252/586 (43%), Gaps = 39/586 (6%)

Query: 53  VHSTLLN--CPSDLIALSF-FIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGE 109
            +STL+N  C S  +  +  FI    +      V +F   I  +  + GR E    I  +
Sbjct: 300 TYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDM-GRIEDAWKIFID 358

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYG-MVLEAFDEMGRFGFTPNTFARNIVMDVLFKIG 168
           + + GC     T+   +     G+    M +  F  M R G  PNT   N +M+VL +  
Sbjct: 359 MKKKGCKPNVYTYTSLIS----GQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENM 414

Query: 169 RVDLGIKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFE 224
            +D  + V     K   LPN  S+N  +   C + D      ++  M++    P +  + 
Sbjct: 415 EIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYN 474

Query: 225 ILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN 284
           I++  +C  G    A ++L LM   G      ++T LI GF ++ ++++A  ++ +M+  
Sbjct: 475 IIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDR 534

Query: 285 GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
           G  PN VTYT+LI G+ + +    A   L+ ++  G  P++  +NVLI  L+K  ++  A
Sbjct: 535 GLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGA 594

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSY 401
            ++   +LE K+ PD  T+ ++++ +C +G   L  ++   +       +L  Y++L+  
Sbjct: 595 EELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQA 654

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVN 461
             + G   +A ++++ +  +G  PD  ++V ++     + K+D A +    ++       
Sbjct: 655 LGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPT 714

Query: 462 AHVHTAIVDRLIEAGRCHKAIQL--------FRRAIVEKYPLDVVS-------------- 499
              +  ++  L      HK + L        F   I+ K  + V+S              
Sbjct: 715 LQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQL 774

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           Y   +  L   GR  EA  LY  M   +  PN  TY+  L+S  +   + +   + + + 
Sbjct: 775 YDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMS 834

Query: 560 DARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM-W 604
           D R EL       L   + + H    A     +M +  L  DE+ W
Sbjct: 835 DQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVW 880



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 116/506 (22%), Positives = 207/506 (40%), Gaps = 37/506 (7%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G       I+ ++ + G      T+   +  Y R        E F+ M   G  PN    
Sbjct: 242 GNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATY 301

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFY 217
           + +++ L   GRV+  +                               D I  M R G  
Sbjct: 302 STLINGLCNSGRVNEAL-------------------------------DFISEMTRHGVL 330

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
           P V  F   +   C MGRI +A+++   M   G   +V  +T LI G R  R   MA  L
Sbjct: 331 PTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSR---MAIGL 387

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
           + +M ++G  PN VTY +L+   ME      A    +M+   G  P+   +N LI     
Sbjct: 388 FHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCT 447

Query: 338 MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV---EADLVV 394
           +G  + A+ +   +L+ +  P   T+  ++   C SG   +  +++  ++    + D   
Sbjct: 448 IGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWS 507

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           Y  L+S FCK      A  ++N M+D+G  P+  ++  L+ G C   K+D A  + + + 
Sbjct: 508 YTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMK 567

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
            +    N   +  ++  L +      A +L +  + EK   DVV+Y+  I GL   G   
Sbjct: 568 RSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIP 627

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLT 574
            A  ++++M      PN +TY  ++ +  +E  ++  + +  ++    +  D  T +++ 
Sbjct: 628 LALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMI 687

Query: 575 KFIFKFHSSSSAVNQLVEMCNLGLIP 600
           +          A + L EM N G  P
Sbjct: 688 EVCVMSGKVDRAFDFLGEMINAGCQP 713



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/372 (25%), Positives = 170/372 (45%)

Query: 185 FLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLG 244
             ++   L  L KLN  S V D    ++R+G  PN+ ++  ++N  CK G + +A  ++ 
Sbjct: 193 LFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIIN 252

Query: 245 LMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
            +   G       +T +I G+ R R LD A  ++ +M + GC PN  TY++LI G   + 
Sbjct: 253 KVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSG 312

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
             + A  F+  +   G  P +      I  L  MG  +DA  ++  + +    P+ YT+ 
Sbjct: 313 RVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYT 372

Query: 365 SLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
           SL+S   +S     L   +    V  + V YNAL++   +    + A+ ++N M   G  
Sbjct: 373 SLISGQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCL 432

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           P+  S+  L+RG C     ++A+++   ++   P      +  I+    ++G    AI++
Sbjct: 433 PNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRV 492

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
                      D  SYT  I G  +  + E A  ++++M    + PN  TY  ++  +CK
Sbjct: 493 LELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCK 552

Query: 545 ERNIKMVKRLLQ 556
           +  +    R+L+
Sbjct: 553 DEKLDCAARMLE 564



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 85/374 (22%), Positives = 173/374 (46%), Gaps = 14/374 (3%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
           F+EM   G  PN      ++    K  ++D   ++L+  +     PN  ++N+ +  L K
Sbjct: 528 FNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTK 587

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            N+ S  +++  +M+ +   P+V  +  ++N  C  G I  A ++   M+  G   +++ 
Sbjct: 588 QNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHT 647

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           ++ LI    +  R++ A  ++ ++ + G  P+ VTY  +I+  + +     AF FL  + 
Sbjct: 648 YSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMI 707

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
           + G  P L  ++VLI  L           VY  L+ L   P++ +  +    +      S
Sbjct: 708 NAGCQPTLQTYDVLIKGLQNEM-------VYHKLVAL---PNAASTSTFDDQIINKDVIS 757

Query: 378 LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
           +L   +  L+ E    +Y+ALLS   ++G   +A  LY +M+ +   P+  ++   L  L
Sbjct: 758 VLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISL 817

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
             A K+D A++V++ +      ++   +  ++  L +  R  +A  +F + +      D 
Sbjct: 818 LRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADE 877

Query: 498 VSYTVAIRGLLEGG 511
           + +T+ I GLL  G
Sbjct: 878 IVWTILINGLLGAG 891



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/373 (20%), Positives = 153/373 (41%), Gaps = 6/373 (1%)

Query: 234 GRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTY 293
             + +A   L +    G  + +  +T L+    +L         + ++++ G  PN++ Y
Sbjct: 172 AEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIY 231

Query: 294 TSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE 353
            S+I    +      A S ++ +   G  PD   +  +I    +    D A ++++ + E
Sbjct: 232 NSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDE 291

Query: 354 LKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQ 410
               P++ T+ +L++ +C SGR +     +  +    V   +  + A +   C  G    
Sbjct: 292 EGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIED 351

Query: 411 AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
           A K++  M  KG  P+ Y++  L+ G   +R    AI ++  +  +    N   + A+++
Sbjct: 352 AWKIFIDMKKKGCKPNVYTYTSLISGQRVSRM---AIGLFHRMSRDGVVPNTVTYNALMN 408

Query: 471 RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
            L+E      A+ +F          +  SY   IRG    G TE+A  + + M      P
Sbjct: 409 VLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTP 468

Query: 531 NAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQL 590
              TY +++  +C   +  +  R+L+ +     + D  +   L     K      A    
Sbjct: 469 TLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMF 528

Query: 591 VEMCNLGLIPDEM 603
            EM + GL P+E+
Sbjct: 529 NEMMDRGLCPNEV 541



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/244 (21%), Positives = 99/244 (40%), Gaps = 32/244 (13%)

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           +IK        + A ++LDM    G    L  +  L+  L+K+      +D Y  +L   
Sbjct: 164 MIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREG 223

Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLY 415
           L P                                +L++YN++++  CK G    A  + 
Sbjct: 224 LQP--------------------------------NLLIYNSVINALCKDGNVRDAESII 251

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
           N +   G  PD +++  ++ G C  R +D A  ++  +       NA  ++ +++ L  +
Sbjct: 252 NKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNS 311

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
           GR ++A+              V ++T  I  L + GR E+A+ ++  MK     PN YTY
Sbjct: 312 GRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTY 371

Query: 536 RVML 539
             ++
Sbjct: 372 TSLI 375


>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
 gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 124/562 (22%), Positives = 237/562 (42%), Gaps = 44/562 (7%)

Query: 48  LAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIV 107
           L P  V + L      L AL  F    ++  + H + ++  +I  +    G F  +  ++
Sbjct: 5   LLPKHVAAVLKQQKDPLKALEMFNKVKREDGFKHSLLTYKCIIQKLG-FHGNFVAMENVL 63

Query: 108 GEL-ARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK 166
            E    +   +    ++  ++ Y R       ++ F+ M  +   P+  + N +M++L +
Sbjct: 64  AETRMDIDNSLLEGVYIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVE 123

Query: 167 IGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK--------------------LNDVS 202
            G      KV    +    +P+  +F I + + C+                    LN V+
Sbjct: 124 SGYFKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVA 183

Query: 203 NVKDVIGM---------------MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
               V G                M+R G +P+V  F  LL+  CK G + E+ +LL  ++
Sbjct: 184 YCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVL 243

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
             G   ++  + + I G  R   L  A  + + +++ G +P+VVTY +LI G  +     
Sbjct: 244 KKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVV 303

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A  +L  L + G  PD   +N LID   KMG   +A  +  G +    VPD +T+CSL+
Sbjct: 304 EAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLI 363

Query: 368 STVCLS---GRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
           + +C +    R   L     G  ++  +++YN L+   C+ G   QA+++ N M + G +
Sbjct: 364 NGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCS 423

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
            D +++  ++ GLC    + +A N+    +      +      ++D   +  +    IQ+
Sbjct: 424 SDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQI 483

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
             +        DV++Y   + GL +  + E+    +  M      PN  TY ++  S CK
Sbjct: 484 LNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCK 543

Query: 545 ERNIKMVKRLLQDVIDARIELD 566
              +     L+ ++++  I  D
Sbjct: 544 AGKVNEALDLVDEILNKGITPD 565



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 124/527 (23%), Positives = 231/527 (43%), Gaps = 9/527 (1%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV +F   I    R T R  +   ++  +   GC + A  +   +  ++         E 
Sbjct: 145 DVYTFTIRIKSFCR-TKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYEL 203

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCK 197
           F++M R G  P+    N ++  L K G V     L  KVLK+    N  +FNI +  LC+
Sbjct: 204 FNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCR 263

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              +S    ++  ++R+G  P+V  +  L+   CK   + EA + L  ++  G       
Sbjct: 264 KGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFT 323

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  LIDG+ ++  L  A  + +  +  G  P+  TY SLI G  +      A +  +   
Sbjct: 324 YNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAAL 383

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
            +G  P ++ +N+LI  L + G    AL + + + E     D +T+  +++ +C  G  S
Sbjct: 384 GKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVS 443

Query: 378 LLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
               L+     +    D+  +N L+  +CK       +++ N M   G TPD  ++  +L
Sbjct: 444 DANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVL 503

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            GL  A K ++ +  ++ +V      N   +  + + L +AG+ ++A+ L    + +   
Sbjct: 504 NGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGIT 563

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQM-KHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
            D VS+   I G    G  + AY L+ +M +   V     TY +M+ +F ++ ++ M ++
Sbjct: 564 PDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEK 623

Query: 554 LLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           L  ++       D +T   +        ++ S    L+EM   G IP
Sbjct: 624 LFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIP 670



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/412 (22%), Positives = 186/412 (45%), Gaps = 31/412 (7%)

Query: 62  SDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTR--LTGRFETVRGIVGELARVGCVIKA 119
           S+L   + FI    ++       S   M+  V R  LT    T   ++  L +   V++A
Sbjct: 249 SNLFTFNIFIQGLCRKGMLSGAMS---MLDSVIREGLTPDVVTYNTLICGLCKNSNVVEA 305

Query: 120 QTFLLFL---RIYWRGEMYGMVLEAFDEMGRF-------------GFTPNTFARNIVMDV 163
           + +L  L    +   G  Y  +++ + +MG               GF P+ F    +++ 
Sbjct: 306 EKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLING 365

Query: 164 LFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN 219
           L +   +D  + +    L +   P  + +N+ +  LC+   +     ++  M   G   +
Sbjct: 366 LCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSD 425

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
           +  + +++N  CKMG +++A  L+   I  G    V  +  LIDG+ +  +++    +  
Sbjct: 426 IWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILN 485

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEA-KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
           KM  +G +P+V+TY S++ G  +A K   +  +F  M+E +G  P+ + +N+L + L K 
Sbjct: 486 KMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVE-KGCVPNKITYNILTESLCKA 544

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC----LSGRFSLLPKLVCGLEVEADLVV 394
           G  ++ALD+ D +L   + PD+ +F +++S       L G + L  ++    +V      
Sbjct: 545 GKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTAT 604

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
           YN +++ F +    +   KL+  M   G  PD Y++  ++ G C     D  
Sbjct: 605 YNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSG 656



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 63/275 (22%), Positives = 120/275 (43%), Gaps = 21/275 (7%)

Query: 106 IVGELARVGCVIKAQ----------------TFLLFLRIYWRGEMYGMVLEAFDEMGRFG 149
           ++  L ++GCV  A                 TF   +  Y +       ++  ++M   G
Sbjct: 432 VINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHG 491

Query: 150 FTPNTFARNIVMDVLFKIGR----VDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVK 205
            TP+    N V++ L K  +    ++    ++++  +PN +++NI   +LCK   V+   
Sbjct: 492 VTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEAL 551

Query: 206 DVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM-ITLGTSLSVNAWTVLIDG 264
           D++  ++ KG  P+   F  +++ F   G +  AYQL   M      S +   + ++I+ 
Sbjct: 552 DLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINA 611

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
           F     L M   L+ +M   GC+P+  TY  +I GF         + FL  +  +G  P 
Sbjct: 612 FAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPS 671

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
           L     +I+CL       +A+D+   ++   +VP+
Sbjct: 672 LTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPE 706


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1164

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/438 (23%), Positives = 204/438 (46%), Gaps = 20/438 (4%)

Query: 130  WRGEMYGMVLEAFDEMGRF-------------GFTPNTFARNIVMDVLFKIGRVDLGIKV 176
            W    Y +V+    ++GR              G+TP+  + + V++   + G +D   K+
Sbjct: 667  WNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKL 726

Query: 177  LKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCK 232
            +++ +     PN  ++   +  LC++  ++  ++    M+ +G  P+  ++  L++ FCK
Sbjct: 727  IEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCK 786

Query: 233  MGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVT 292
             G I  A +    M +   +  V  +T +I GF ++  +  AG L+ +M+  G  P+++T
Sbjct: 787  RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIIT 846

Query: 293  YTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
            +T L+ G+ +A     AF   + +   G +P++V +  LID L K G  D A ++   + 
Sbjct: 847  FTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 906

Query: 353  ELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPN 409
            ++ L P+ +T+ S+++ +C SG      KLV   E   + AD V Y  L+  +CK+G  +
Sbjct: 907  KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 966

Query: 410  QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
            +A ++   ML KG  P   +F  L+ G C    +++   +   ++    A NA     +V
Sbjct: 967  KAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLV 1026

Query: 470  DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
             +         A  +++         D  +Y   ++G       +EA+ L+ +MK     
Sbjct: 1027 KQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFS 1086

Query: 530  PNAYTYRVMLLSFCKERN 547
             +  TY V++  F K + 
Sbjct: 1087 VSVSTYSVLIKGFFKRKK 1104



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 103/418 (24%), Positives = 187/418 (44%), Gaps = 8/418 (1%)

Query: 77   RDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYG 136
            + Y  DV S+  +I+   R  G  + V  ++ ++ + G    + T+   + +  R     
Sbjct: 698  KGYTPDVISYSTVINGYCRF-GELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLA 756

Query: 137  MVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIAL 192
               EAF EM   G  P+T     ++D   K G +    K   E       P+ L++   +
Sbjct: 757  EAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 816

Query: 193  CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
               C++ D+     +   M+ +G  P++  F  L+N +CK G I +A+++   MI  G S
Sbjct: 817  SGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCS 876

Query: 253  LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
             +V  +T LIDG  +   LD A  L  +M + G  PN+ TY S++ G  ++     A   
Sbjct: 877  PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 936

Query: 313  LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
            +   E+ G   D V +  L+D   K G  D A ++   +L   L P   TF  L++  CL
Sbjct: 937  VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCL 996

Query: 373  SGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
             G      KL+  +    +  +   +N L+  +C       A  +Y  M  +G  PD  +
Sbjct: 997  HGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKT 1056

Query: 430  FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
            +  L++G C AR + EA  ++Q +     +V+   ++ ++    +  +  +A ++F +
Sbjct: 1057 YENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQ 1114



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/450 (22%), Positives = 203/450 (45%), Gaps = 8/450 (1%)

Query: 82   DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
            +V S++ +I  V +L GR      ++  +   G      ++   +  Y R      V + 
Sbjct: 668  NVASYNIVIHFVCQL-GRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKL 726

Query: 142  FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
             ++M + G  PN++    ++ +L +I ++    +   E      LP+ + +   +   CK
Sbjct: 727  IEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCK 786

Query: 198  LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              D+         M  +   P+V  +  +++ FC++G + EA +L   M+  G    +  
Sbjct: 787  RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIIT 846

Query: 258  WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
            +T L++G+ +   +  A  +   M+Q GCSPNVVTYT+LI G  +      A   L  + 
Sbjct: 847  FTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 906

Query: 318  SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
              G  P++  +N +++ L K G+ ++A+ +        L  D+ T+ +L+   C SG   
Sbjct: 907  KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 966

Query: 378  LLPKLVC---GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
               +++    G  ++  +V +N L++ FC  G      KL N ML KG  P+  +F  L+
Sbjct: 967  KAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLV 1026

Query: 435  RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            +  C    +  A  +Y+ +       +   +  +V     A    +A  LF+    + + 
Sbjct: 1027 KQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFS 1086

Query: 495  LDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
            + V +Y+V I+G  +  +  EA  ++ QM+
Sbjct: 1087 VSVSTYSVLIKGFFKRKKFVEAREIFDQMR 1116



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 102/454 (22%), Positives = 206/454 (45%), Gaps = 15/454 (3%)

Query: 135  YGMVLEA---FDEMGRFGFTPNTFARNIVMDVLFK-IGRVDLGIKVLKETQLP------N 184
            +GM+ EA   F++M  +G   +  + N+ +  L K   +    I V +E   P      N
Sbjct: 611  FGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFRE--FPEVGVCWN 668

Query: 185  FLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLG 244
              S+NI +  +C+L  ++    ++ +M  KG+ P+V  +  ++N +C+ G + + ++L+ 
Sbjct: 669  VASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIE 728

Query: 245  LMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
             M   G   +   +  +I    R+ +L  A   + +M+  G  P+ + YT+L+ GF +  
Sbjct: 729  KMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRG 788

Query: 305  MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
                A  F   + S    PD++ +  +I    ++G   +A  ++  +L   L PD  TF 
Sbjct: 789  DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFT 848

Query: 365  SLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
             L++  C +G      ++   +       ++V Y  L+   CK G  + A +L + M   
Sbjct: 849  ELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 908

Query: 422  GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
            G  P+ +++  ++ GLC +  I+EA+ +           +   +T ++D   ++G   KA
Sbjct: 909  GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 968

Query: 482  IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
             ++    + +     +V++ V + G    G  E+   L + M    + PNA T+  ++  
Sbjct: 969  QEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQ 1028

Query: 542  FCKERNIKMVKRLLQDVIDARIELDYHTSIRLTK 575
            +C   N+K    + +D+    +E D  T   L K
Sbjct: 1029 YCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVK 1062



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/391 (23%), Positives = 173/391 (44%), Gaps = 4/391 (1%)

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR-LRRLD 272
           K +  + R+F++      + G + EA ++   M+  G  LSV++  V +    +   +  
Sbjct: 592 KDWGSDPRVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTA 651

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A  ++ +  + G   NV +Y  +I    +    + A   L ++E +G+ PD++ ++ +I
Sbjct: 652 TAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVI 711

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVE 389
           +   + G  D    + + + +  L P+SYT+ S++  +C   + +   +    + G  + 
Sbjct: 712 NGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGIL 771

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            D +VY  L+  FCK G    A K +  M  +  TPD  ++  ++ G C    + EA  +
Sbjct: 772 PDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 831

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
           +  ++      +    T +++   +AG    A ++    I      +VV+YT  I GL +
Sbjct: 832 FHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 891

Query: 510 GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
            G  + A  L  +M  I + PN +TY  ++   CK  NI+   +L+ +   A +  D  T
Sbjct: 892 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 951

Query: 570 SIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
              L     K      A   L EM   GL P
Sbjct: 952 YTTLMDAYCKSGEMDKAQEILTEMLGKGLQP 982



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 105/228 (46%), Gaps = 4/228 (1%)

Query: 140  EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNL---- 195
            E   EM + G  PN F  N +++ L K G ++  +K++ E +     +  +    L    
Sbjct: 900  ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 959

Query: 196  CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
            CK  ++   ++++  M+ KG  P +  F +L+N FC  G + +  +LL  M+  G + + 
Sbjct: 960  CKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 1019

Query: 256  NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
              +  L+  +     L  A  +++ M   G  P+  TY +L+KG   A+    A+     
Sbjct: 1020 TTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQE 1079

Query: 316  LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
            ++ +G +  +  ++VLI    K   + +A +++D +    L  D   F
Sbjct: 1080 MKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIF 1127



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 60/235 (25%), Positives = 108/235 (45%), Gaps = 3/235 (1%)

Query: 370 VCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
           VC  GR +    L+  +E++    D++ Y+ +++ +C+ G  ++  KL   M  KG  P+
Sbjct: 679 VCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPN 738

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
           +Y++  ++  LC   K+ EA   +  ++      +  V+T +VD   + G    A + F 
Sbjct: 739 SYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFY 798

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
                    DV++YT  I G  + G   EA  L+ +M    + P+  T+  ++  +CK  
Sbjct: 799 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAG 858

Query: 547 NIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           +IK   R+   +I A    +  T   L   + K     SA   L EM  +GL P+
Sbjct: 859 HIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 913



 Score = 43.9 bits (102), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 52/241 (21%), Positives = 89/241 (36%), Gaps = 50/241 (20%)

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD-NYSFVGLLRGLCGARKIDEAIN 448
           +D  V++       + G   +A K++  ML+ G     +   V L R      K   AI 
Sbjct: 596 SDPRVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAII 655

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           V++         N   +  ++  + + GR ++A  L     ++ Y  DV+SY+  I G  
Sbjct: 656 VFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYC 715

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
             G  ++ + L  +MK   + PN+YTY  ++   C                         
Sbjct: 716 RFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLC------------------------- 750

Query: 569 TSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTPVSLFDGFVPCE 628
              R+ K        + A     EM   G++PD            T+   +L DGF  C+
Sbjct: 751 ---RICKL-------AEAEEAFSEMIGQGILPD------------TIVYTTLVDGF--CK 786

Query: 629 R 629
           R
Sbjct: 787 R 787


>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
 gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
          Length = 468

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/459 (22%), Positives = 215/459 (46%), Gaps = 13/459 (2%)

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
           +++  C I    +   ++   +  M    LE F+ M      P+    N++++     G 
Sbjct: 1   MSKAKCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGE 60

Query: 170 ----VDLGIKVLKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFE 224
               +DL   + +E ++ P+  ++N  +  LC   +    + ++  M  K    NV  + 
Sbjct: 61  FGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYS 120

Query: 225 ILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN 284
            ++    K  +  E+Y++L  M+  G +  V A+  ++ GF R   ++ A  +++ MV++
Sbjct: 121 SIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVES 180

Query: 285 GCSPNVVTYTSLIKGFMEAKMFSIAFSFLD--MLESEGHAPDLVFHNVLIDCLSKMGSYD 342
           G  P+ V+Y  LI G  +      +   L    + + G+ P+++  + LI  L + G  +
Sbjct: 181 GYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELE 240

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF----SLLPKLVCGLEVEADLVVYNAL 398
            AL+V+  +LE    P+ YT+ +L++ +C + +      L  K+     +  D V YN+L
Sbjct: 241 KALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQAC-IPPDAVAYNSL 299

Query: 399 LSYFCKAGFPNQAVKLYNTMLD-KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
           ++ +CK G  ++A KLY  M    G  P   +F  L+ G C   K+  A  +   +    
Sbjct: 300 IAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKG 359

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAY 517
            A +   +  ++  L  A +  +A++++++   +K+ LD VS    + GL + G  ++AY
Sbjct: 360 LAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAY 419

Query: 518 ILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
            ++   +     PN  T+R++  S  K   ++  ++L++
Sbjct: 420 AVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLME 458



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 161/357 (45%), Gaps = 10/357 (2%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
             EM       N F  + ++  L K  + +   KVL+E       P+  +FN  +    +
Sbjct: 104 LSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFAR 163

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI--TLGTSLSV 255
            N++   ++V   MV  G+ P+   + IL++   K+G++ E+ ++L  M     G   +V
Sbjct: 164 SNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNV 223

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
             ++ LI G  R   L+ A  ++  M++ GC PN  TYT+LI G   A+    A    + 
Sbjct: 224 ITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEK 283

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE-LKLVPDSYTFCSLLSTVCLSG 374
           +      PD V +N LI    K GS D+A  +Y  +     L P   TF +L+   C  G
Sbjct: 284 MTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLG 343

Query: 375 RFSLLPKLVCGLEVE---ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
           +     +LV  +  +   AD   Y  L++   +A   ++A+++Y  M +K F  D  S V
Sbjct: 344 KLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCV 403

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
             + GLC    ID+A  V++    +    N      + + LI+ GR   A +L   A
Sbjct: 404 SFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPA 460



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/324 (20%), Positives = 127/324 (39%), Gaps = 70/324 (21%)

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           M +  C+     Y  +++   +A M + A    + ++SE   P LV +NVLI+     G 
Sbjct: 1   MSKAKCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGE 60

Query: 341 YDDALDVYDGL-LELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALL 399
           +  ALD++  +  E ++ PD +T                                YN L+
Sbjct: 61  FGKALDLFQSMKREKRVEPDRWT--------------------------------YNTLI 88

Query: 400 SYFCKAGFPNQAVKLYNTMLDK-----------------------------------GFT 424
           S  C +G    A KL + M DK                                   G  
Sbjct: 89  SGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCN 148

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           PD ++F G+++G   +  +++A  VYQ +V +    +   +  ++  L + G+  +++++
Sbjct: 149 PDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKI 208

Query: 485 FRRAIVEK--YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
                +    Y  +V++++  I GL   G  E+A  ++  M      PN YTY  ++   
Sbjct: 209 LSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGL 268

Query: 543 CKERNIKMVKRLLQDVIDARIELD 566
           C+   +   + L + +  A I  D
Sbjct: 269 CRAEKVIQARELFEKMTQACIPPD 292


>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
 gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
          Length = 480

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/465 (23%), Positives = 201/465 (43%), Gaps = 8/465 (1%)

Query: 103 VRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMD 162
              IV E+   G     Q+  L +R +++   +       D M   G  PN    N ++ 
Sbjct: 13  AEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLIS 72

Query: 163 VLFKIG---RVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN 219
            L K G     +  +K + +   PN +S+NI +   CK  ++      +  M   G  P 
Sbjct: 73  CLCKAGMLAEAESYLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPT 132

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
              +  ++  FCK G +++A  +   M   G    +  + VL+ G  R R++  A  L+ 
Sbjct: 133 PHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFR 192

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
            M   GC P+VVTY ++I G  + K    A   L+ ++ E  +P  V +  LID L K  
Sbjct: 193 SMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFA 252

Query: 340 SYDDALDVYDGLLE--LKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVV 394
               A +V++ + E        +Y+   L++ +C + R     ++   + G  +   +V 
Sbjct: 253 RLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVT 312

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           YN LL           A++L   MLD+   P+ +++  L+  LC   +++EA  +   + 
Sbjct: 313 YNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMR 372

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
                 +  +   ++ RL  AGR   A +L++          V S  + + G+L  G  +
Sbjct: 373 DKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVD 432

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           EA     QM    + P+ +TY  +++  C +      ++L+++++
Sbjct: 433 EAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELV 477



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 87/365 (23%), Positives = 164/365 (44%), Gaps = 6/365 (1%)

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
           V+  + ++  M   GF P+V+   +L+  F K G        L  M+  G   +   +  
Sbjct: 10  VAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNN 69

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           LI    +   L  A    ++M Q+ C+PNVV+Y  +I G+ +A+    A +FL  +E  G
Sbjct: 70  LISCLCKAGMLAEAESYLKRMPQH-CAPNVVSYNIIIDGYCKARNIEKALAFLREMEELG 128

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
           H P    ++ ++    K G+   A+DV+  +      PD   F  LLS +  + +     
Sbjct: 129 HPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEAR 188

Query: 381 KLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
           +L   +     + D+V YN +++  CK    ++AV L   M  +  +P   ++  L+  L
Sbjct: 189 ELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHL 248

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIV--DRLIEAGRCHKAIQLFRRAIVEKYPL 495
           C   ++ +A  V++ +           ++ ++  + L +A R  +A ++F+         
Sbjct: 249 CKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISP 308

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
            VV+Y   + GLL   + ++A  L   M      PN +TY +++ S CK   ++   +LL
Sbjct: 309 TVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLL 368

Query: 556 QDVID 560
             + D
Sbjct: 369 SAMRD 373



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 80/365 (21%), Positives = 143/365 (39%), Gaps = 36/365 (9%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           TG       +  E+   GC      F + L   WR        E F  M   G  P+   
Sbjct: 146 TGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDV-- 203

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
                                        +++N  +  LCK   +     ++  M ++  
Sbjct: 204 -----------------------------VTYNTMIAGLCKWKKLDEAVFLLERMKQEDV 234

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV--LIDGFRRLRRLDMA 274
            P    +  L++  CK  R+ +AY++   M       +  A++V  LI+G  + RR   A
Sbjct: 235 SPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEA 294

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             ++++M   G SP VVTY +L++G +       A      +  +  AP++  + +LI  
Sbjct: 295 KEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISS 354

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEAD 391
           L K    ++A  +   + +   VP    +  LLS +  +GR      L K +  +  +  
Sbjct: 355 LCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQL 414

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
           +   N LL    + G  ++A      M D G  PD +++  L+ GLC   K D+A  + +
Sbjct: 415 VGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVE 474

Query: 452 GIVMN 456
            +V +
Sbjct: 475 ELVRD 479



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 117/250 (46%), Gaps = 2/250 (0%)

Query: 297 IKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
           I+  +EA + + A + ++ ++  G +PD+  H +LI    K GS+       D +LE  L
Sbjct: 1   IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGL 60

Query: 357 VPDSYTFCSLLSTVCLSGRFSLLPKLVCGL--EVEADLVVYNALLSYFCKAGFPNQAVKL 414
            P++  + +L+S +C +G  +     +  +      ++V YN ++  +CKA    +A+  
Sbjct: 61  FPNAILYNNLISCLCKAGMLAEAESYLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALAF 120

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
              M + G  P  +++  +++  C    + +A++V+  +       +      ++  L  
Sbjct: 121 LREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWR 180

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
           A + H+A +LFR         DVV+Y   I GL +  + +EA  L  +MK   V P   T
Sbjct: 181 ARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVT 240

Query: 535 YRVMLLSFCK 544
           Y  ++   CK
Sbjct: 241 YTTLIDHLCK 250


>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
 gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
          Length = 436

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 185/413 (44%), Gaps = 8/413 (1%)

Query: 119 AQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK 178
           A TF      + +      V E +  M   G+T       I++  L K+G  D   K+L 
Sbjct: 10  AATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLH 69

Query: 179 ETQLPNFLSFNIALCN----LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
             +L  F    IA       LCKLN V   +++I  M R    P+   +  ++   CK  
Sbjct: 70  TMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGPIVERLCKTK 128

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
           RI +A   +  M T G       +  ++ G  +  +++ A  L+EKMV+   +PNVVTY 
Sbjct: 129 RIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYN 188

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
           +LI G  +A     A+     +  +G+ P  V +N LID   K      A DV+D ++  
Sbjct: 189 TLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRS 248

Query: 355 KLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQA 411
             VP+  T+ +L+  +  SG+     +++ G+    V  ++  Y+ L+  FCK    ++A
Sbjct: 249 NCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEA 308

Query: 412 VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
            KL   M+ +G  P   ++  LL  LC A K+++A  +++G+           +  ++  
Sbjct: 309 HKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRA 368

Query: 472 LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
           L    +   A +L+   I +  P D ++Y     GL   G+  EA  L  +MK
Sbjct: 369 LCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 421



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 89/381 (23%), Positives = 175/381 (45%), Gaps = 4/381 (1%)

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
           +P   +FN       K   +  VK+V   MV  G+      + IL++C CK+G   EAY+
Sbjct: 7   IPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYK 66

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           LL  M          A++ +I+   +L R++ A  L EKM +    P+ +TY  +++   
Sbjct: 67  LLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGPIVERLC 125

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           + K    A + ++ + + G  PD   +N ++  L +    ++A  +++ +++ ++ P+  
Sbjct: 126 KTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVV 185

Query: 362 TFCSLLSTVCLSGRFSL---LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           T+ +L++ +C + R      L K + G       V YN L+  FCK      A  +++ M
Sbjct: 186 TYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKM 245

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
           +     P+  ++  L+ GL  + K+  A  V  G+V      N   ++ ++D   +  R 
Sbjct: 246 VRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRV 305

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            +A +L  + + +     VV+Y + +  L    + E+A+ L+  M      P   TY  +
Sbjct: 306 DEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTL 365

Query: 539 LLSFCKERNIKMVKRLLQDVI 559
           L + C  + +    RL  ++I
Sbjct: 366 LRALCHHKQLDGAHRLYAEMI 386



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/396 (23%), Positives = 178/396 (44%), Gaps = 6/396 (1%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR E V+ +   +   G  ++A  + + +    +   +    +    M    F     A 
Sbjct: 24  GRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTMRLKRFKRKAIAY 83

Query: 158 NIVMDVLFKIGRVDLG---IKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
           + +++ L K+ RV+     I+ +     P+ L++   +  LCK   + +    +  M  +
Sbjct: 84  STIINWLCKLNRVEEARELIEKMARYAPPDALTYGPIVERLCKTKRIDDALATVEEMATR 143

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           G  P+  ++  +L+  C+  ++ EA  L   M+    + +V  +  LI+G  +  R++ A
Sbjct: 144 GIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETA 203

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             L+++M   G  P  V+Y +LI GF + K    A    D +      P++V +  LID 
Sbjct: 204 YELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDG 263

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---D 391
           LSK G    A +V DG+++  + P+  T+  L+   C   R     KL+  +  +     
Sbjct: 264 LSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPT 323

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
           +V YN LL+  C+A     A KL+  M  +   P   ++  LLR LC  +++D A  +Y 
Sbjct: 324 VVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYA 383

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
            ++      +A  +  +   L  AG+ H+A +L  +
Sbjct: 384 EMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEK 419



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 120/247 (48%), Gaps = 7/247 (2%)

Query: 116 VIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK----IGRVD 171
           V+   T +  L   WR E      E F EM   G+ P   + N ++D   K    +   D
Sbjct: 184 VVTYNTLINGLCKAWRIET---AYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKD 240

Query: 172 LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFC 231
           +  K+++   +PN +++   +  L K   V    +V+  MV+KG  PNV  +  L++ FC
Sbjct: 241 VFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFC 300

Query: 232 KMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVV 291
           K+ R+ EA++LL  M+T G + +V  + +L++   R  +L+ A  L+  M Q  C P VV
Sbjct: 301 KVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVV 360

Query: 292 TYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGL 351
           TY +L++     K    A      + ++G  PD + ++ L   L++ G   +A ++ + +
Sbjct: 361 TYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 420

Query: 352 LELKLVP 358
              K  P
Sbjct: 421 KLTKRNP 427



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 47/211 (22%), Positives = 91/211 (43%), Gaps = 1/211 (0%)

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
             +N +   F KAG   Q  ++Y  M++ G+T     +  L+  LC     DEA  +   
Sbjct: 11  ATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHT 70

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           + +      A  ++ I++ L +  R  +A +L  + +    P D ++Y   +  L +  R
Sbjct: 71  MRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEK-MARYAPPDALTYGPIVERLCKTKR 129

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
            ++A     +M    + P+A+ Y  +L   C+E  ++  + L + ++  RI  +  T   
Sbjct: 130 IDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNT 189

Query: 573 LTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           L   + K     +A     EM   G +P E+
Sbjct: 190 LINGLCKAWRIETAYELFKEMAGKGYVPTEV 220


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 112/488 (22%), Positives = 215/488 (44%), Gaps = 7/488 (1%)

Query: 117 IKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI-- 174
           +   T  + +  Y +   +  V     EM +    P+    N+++D  F+ G  +  +  
Sbjct: 93  VNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMAL 152

Query: 175 --KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCK 232
              ++ +   P  +++N  L  LC+        +V   M   G  P+VR F IL+  FC+
Sbjct: 153 VDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCR 212

Query: 233 MGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVT 292
           +G I EA ++   M   G    + +++ LI  F R  ++D A     +M   G  P+ V 
Sbjct: 213 VGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVI 272

Query: 293 YTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
           YT +I GF  A + S A    D +   G  PD+V +N L++ L K     DA  + + + 
Sbjct: 273 YTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMR 332

Query: 353 ELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPN 409
           E  + PD  TF +L+   C+ G+     +L   +    +  D+V YN L+   C+ G  +
Sbjct: 333 ERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLD 392

Query: 410 QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
           +A  L++ M  +   P++ ++  L+   C   ++++A      ++      N   + +I+
Sbjct: 393 KANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSII 452

Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
                +G   K  +  ++ +V K   D+++Y   I G ++  +  +A+ L + M+   V 
Sbjct: 453 KGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQ 512

Query: 530 PNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQ 589
           P+  TY +++  F    N++    + + +    IE D +T + +        +S  A   
Sbjct: 513 PDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQL 572

Query: 590 LVEMCNLG 597
             EM   G
Sbjct: 573 HDEMLQRG 580



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 111/468 (23%), Positives = 201/468 (42%), Gaps = 7/468 (1%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
            F+ V  ++ E+ +        T  + +   +R       +   D M   G  P     N
Sbjct: 110 EFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYN 169

Query: 159 IVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
            V+  L + G  D   +V KE       P+  SF I +   C++ ++     +   M  +
Sbjct: 170 SVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHR 229

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           G  P++  F  L+  F + G++  A   L  M   G       +T++I GF R   +  A
Sbjct: 230 GIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDA 289

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             + ++MV  GC P+VVTY +L+ G  + +    A   L+ +   G  PDL     LI  
Sbjct: 290 LRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHG 349

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEAD 391
               G  D AL ++D +L  +L PD  T+ +L+  +C  G       L   +   E+  +
Sbjct: 350 YCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPN 409

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
            V Y+ L+   C+ G    A    + M++KG  P+  ++  +++G C +  + +     Q
Sbjct: 410 HVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQ 469

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
            +++N  + +   +  ++   I+  + H A +L      EK   DVV+Y + I G    G
Sbjct: 470 KMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHG 529

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
             +EA  ++ +M    + P+ YTY  M+       N K   +L  +++
Sbjct: 530 NVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEML 577



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/261 (20%), Positives = 111/261 (42%), Gaps = 3/261 (1%)

Query: 344 ALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLS 400
           A D Y  +       ++YT   ++   C +  F  +  ++  +E   V  D+V +N ++ 
Sbjct: 79  AADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVD 138

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
              +AG    A+ L ++M+ KG  P   ++  +L+GLC +   D+A  V++ +     A 
Sbjct: 139 ARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAP 198

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
           +    T ++      G   +A+++++         D+VS++  I      G+ + A    
Sbjct: 199 DVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYL 258

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKF 580
            +M+   + P+   Y +++  FC+   +    R+  +++      D  T   L   + K 
Sbjct: 259 REMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKE 318

Query: 581 HSSSSAVNQLVEMCNLGLIPD 601
                A   L EM   G+ PD
Sbjct: 319 RRLLDAEGLLNEMRERGVPPD 339


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 176/360 (48%), Gaps = 7/360 (1%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           +G+ +    ++  + +  C     T+ + +    R    G  ++  DEM   G TP+   
Sbjct: 217 SGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVT 276

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N++++ + K GR+D  IK L +       PN ++ NI L ++C      + + ++  M+
Sbjct: 277 YNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADML 336

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
           RKGF P+V  F IL+N  C+ G +  A  +L  M   G   +  ++  L+ GF + +++D
Sbjct: 337 RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMD 396

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A    E+MV  GC P++VTY +++    +      A   L+ L S+G +P L+ +N +I
Sbjct: 397 RAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVI 456

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VE 389
           D L+K G    A+ + D +    L PD+ T+ SL+  +   G+     K     E   + 
Sbjct: 457 DGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIR 516

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            + V +N+++   CK+   ++A+     M+++G  P+  S+  L+ GL       EA+ +
Sbjct: 517 PNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALEL 576



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 116/521 (22%), Positives = 226/521 (43%), Gaps = 35/521 (6%)

Query: 80  FHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVL 139
             DV+S +H+  +V   TG  E     +  +   G V         +R + R        
Sbjct: 100 LEDVESNNHLRQMVR--TGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAA 157

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-PNFLSFNIALCNLCKL 198
           +  + +   G  P+    N+++    K G ++  + VL    + P+ +++N  L +LC  
Sbjct: 158 KILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDS 217

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
             +    +V+  M+++  YP+V  + IL+   C+   +  A +LL  M   G +  V  +
Sbjct: 218 GKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTY 277

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
            VL++G  +  RLD A      M  +GC PNV+T+  +++       +  A   L  +  
Sbjct: 278 NVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLR 337

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL 378
           +G +P +V  N+LI+ L + G    A+D+ + + +    P+S +                
Sbjct: 338 KGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLS---------------- 381

Query: 379 LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
                           YN LL  FCK    ++A++    M+ +G  PD  ++  +L  LC
Sbjct: 382 ----------------YNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALC 425

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
              K+++A+ +   +     +     +  ++D L +AG+  KAI+L      +    D +
Sbjct: 426 KDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTI 485

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           +Y+  + GL   G+ +EA   + + + + + PNA T+  ++L  CK R        L  +
Sbjct: 486 TYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFM 545

Query: 559 IDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLI 599
           I+   + +  +   L + +     +  A+  L E+CN GL+
Sbjct: 546 INRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 92/358 (25%), Positives = 163/358 (45%), Gaps = 14/358 (3%)

Query: 254 SVNAWTVL--IDGFRRLRRLDMAGYL------WEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           SVN+   L  ++    LR++   G L       E MV +G  P+++  T+LI+GF     
Sbjct: 93  SVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGK 152

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
              A   L++LE  G  PD++ +NV+I    K G  ++AL V D    + + PD  T+ +
Sbjct: 153 TRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLD---RMSVSPDVVTYNT 209

Query: 366 LLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
           +L ++C SG+     +++  +   +   D++ Y  L+   C+      A+KL + M D+G
Sbjct: 210 ILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRG 269

Query: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI 482
            TPD  ++  L+ G+C   ++DEAI     +  +    N   H  I+  +   GR   A 
Sbjct: 270 CTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAE 329

Query: 483 QLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
           +L    + + +   VV++ + I  L   G    A  +  +M      PN+ +Y  +L  F
Sbjct: 330 KLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGF 389

Query: 543 CKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           CKE+ +      L+ ++      D  T   +   + K      AV  L ++ + G  P
Sbjct: 390 CKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSP 447



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 89/376 (23%), Positives = 163/376 (43%), Gaps = 12/376 (3%)

Query: 232 KMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVV 291
           + G + E ++ L  M+  G    +   T LI GF RL +   A  + E +  +G  P+V+
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173

Query: 292 TYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGL 351
           TY  +I G+ +A   + A S LD +     +PD+V +N ++  L   G    A++V D +
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRMSV---SPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230

Query: 352 LELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFP 408
           L+    PD  T+  L+   C         KL+  +       D+V YN L++  CK G  
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290

Query: 409 NQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAI 468
           ++A+K  N M   G  P+  +   +LR +C   +  +A  +   ++    + +      +
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350

Query: 469 VDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAV 528
           ++ L   G   +AI +  +        + +SY   + G  +  + + A     +M     
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410

Query: 529 PPNAYTYRVMLLSFCKERNIKMVKRLLQDVID---ARIELDYHTSIRLTKFIFKFHSSSS 585
            P+  TY  ML + CK+  ++    +L  +     + + + Y+T I     + K   +  
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVI---DGLAKAGKTGK 467

Query: 586 AVNQLVEMCNLGLIPD 601
           A+  L EM    L PD
Sbjct: 468 AIKLLDEMRAKDLKPD 483



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/268 (22%), Positives = 124/268 (46%), Gaps = 4/268 (1%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           TGR+     ++ ++ R G      TF + +    R  + G  ++  ++M + G  PN+ +
Sbjct: 322 TGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLS 381

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N ++    K  ++D  I+ L+        P+ +++N  L  LCK   V +  +++  + 
Sbjct: 382 YNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLS 441

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
            KG  P +  +  +++   K G+  +A +LL  M           ++ L+ G  R  ++D
Sbjct: 442 SKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVD 501

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A   + +  + G  PN VT+ S++ G  +++    A  FL  + + G  P+   + +LI
Sbjct: 502 EAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILI 561

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDS 360
           + L+  G   +AL++ + L    L+  S
Sbjct: 562 EGLAYEGMAKEALELLNELCNKGLMKKS 589



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/209 (22%), Positives = 86/209 (41%), Gaps = 3/209 (1%)

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           V  N  L    + G   +  K    M+  G  PD      L+RG C   K  +A  + + 
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           +  +    +   +  ++    +AG  + A+ +  R  V     DVV+Y   +R L + G+
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSP---DVVTYNTILRSLCDSGK 219

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
            ++A  +  +M      P+  TY +++ + C++  +    +LL ++ D     D  T   
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279

Query: 573 LTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           L   I K      A+  L +M + G  P+
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPN 308


>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
 gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
          Length = 545

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 122/499 (24%), Positives = 213/499 (42%), Gaps = 54/499 (10%)

Query: 47  ILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGI 106
           IL P +V   +   P    A   F W  KQ  + H+  + ++++SV  +           
Sbjct: 66  ILVPDLVGKVIHRIPDPNTAWEVFQWAGKQSKFTHNRFTCNNLLSVYVK----------- 114

Query: 107 VGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK 166
               AR     + +   LF + + +                  F P+  + N +M+  FK
Sbjct: 115 ----AR-----RVEDAHLFFQSHMKNV----------------FEPDEVSYNTLMNGFFK 149

Query: 167 IGRVDLGIKV---LKETQLPNFLSFNIALCNLCKLNDVSNV----KDVIGMMVRKGFYPN 219
            G V   + +   +K++ +    S NI L  LC    +S      KD+ G+     F PN
Sbjct: 150 AGDVKKALALFGEMKDSGIAVLRSHNIVLRGLCSGGKISMAWEVFKDMSGI-----FSPN 204

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
           +  + I+++  CK  ++ +A  L   M+       V  +  LIDG  + RR+  A  L+E
Sbjct: 205 LISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFE 264

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH-APDLVFHNVLIDCLSKM 338
           +    GC P VVTY ++I G  +      A +  D +  E H  PD+  ++ LI+ L+  
Sbjct: 265 EARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLS 324

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG----RFSLLPKLVCGLEVEADLVV 394
              + A ++Y+ +L+    PD  T+ +LL  +C SG       +  K+  G   + +++ 
Sbjct: 325 NRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVIT 384

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           Y  L+  FCK      AVKL   M  +   PD  +F  +++ LC   +IDEA  +++ I 
Sbjct: 385 YTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESIG 444

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
                 +   +T +     +  R   A +L  R +       + +YT  + G    GR  
Sbjct: 445 KTCKPDSVLFNTMLAG-YCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYS 503

Query: 515 EAYILYSQMKHIAVPPNAY 533
           +A I+Y +M  +  PP  +
Sbjct: 504 DALIMYHEMIEMGFPPERH 522



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 127/484 (26%), Positives = 218/484 (45%), Gaps = 45/484 (9%)

Query: 140 EAFDEMGRFG-FTPNTFARNIVMDVLFKIGRVDLG----IKVLKETQLPNFLSFNIALCN 194
           E F   G+   FT N F  N ++ V  K  RV+         +K    P+ +S+N  +  
Sbjct: 87  EVFQWAGKQSKFTHNRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNG 146

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
             K  DV     + G M   G    +R   I+L   C  G+I+ A+++   M  +  S +
Sbjct: 147 FFKAGDVKKALALFGEMKDSGI-AVLRSHNIVLRGLCSGGKISMAWEVFKDMSGI-FSPN 204

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           + ++T++IDG  + R++D A  L+++MV     P+VVTY +LI G  + +    A+   +
Sbjct: 205 LISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFE 264

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL-ELKLVPDSYTFCSLLSTVCLS 373
              ++G  P +V +N +ID L K G  ++AL +YD ++ E  L PD +T+ +L++ + LS
Sbjct: 265 EARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLS 324

Query: 374 GRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
            R             E    +Y  +L   C     +  V  YNT+LD             
Sbjct: 325 NRG------------EKAYELYEEMLDTGC-----SPDVVTYNTLLD------------- 354

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPA-VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
             GLC +   D+A+ +++ + + N    N   +T ++DR  +  R   A++L +      
Sbjct: 355 --GLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRS 412

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVK 552
              D V++T  I+ L +  R +EA+ L+  +      P++  +  ML  +CK   I   K
Sbjct: 413 LLPDAVTFTTVIQKLCKESRIDEAHELFESIGK-TCKPDSVLFNTMLAGYCKITRIDDAK 471

Query: 553 RLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSD 612
           +L   ++D+       T   L     +    S A+    EM  +G  P+   R L  L D
Sbjct: 472 KLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPPE---RHLAELVD 528

Query: 613 ETMT 616
            T T
Sbjct: 529 RTRT 532


>gi|297819626|ref|XP_002877696.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297323534|gb|EFH53955.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1188

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 133/548 (24%), Positives = 242/548 (44%), Gaps = 67/548 (12%)

Query: 46  IILAPHIVHSTLLNC-PSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVR 104
           I L P ++   L  C  +  +   FF+W  KQ  Y H  +    M+ +++++  +F  V 
Sbjct: 96  IDLRPGLIVRVLSRCGDAGNLGYRFFLWATKQPGYCHSYEVCKSMVKILSKMR-QFGAVW 154

Query: 105 GIVGELARVGC-VIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDV 163
           G++ E+ +    +I+ + F++ +R +    M    +E  DEM ++GF P+ +    ++D 
Sbjct: 155 GLIEEMRKENPELIEPELFVVLIRRFASANMVKKAVEVLDEMPKYGFEPDEYVFGCLLDA 214

Query: 164 LFKIGRVDLGIKV---LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV 220
           L K G V    KV   ++E   PN   F   L   C+   +   K+V+  M   G  P++
Sbjct: 215 LCKNGSVKDASKVFEDMREKIPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDI 274

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF-RRLRRLDMAGYLWE 279
            +F  LL+ +   G++A+AY LL  M   G   + N +TVLI    R  +R+D A  ++ 
Sbjct: 275 VVFTNLLSGYAHAGKMADAYDLLNDMRKRGYEPNANCYTVLIQALCRTEKRMDEAMRVFV 334

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
           +M + GC  ++VTYT+LI GF +  M    +S LD +  +G  P  V +  ++    K  
Sbjct: 335 EMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQILVAHEKKE 394

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALL 399
            +++ L++ + + ++   P                                DL++YN ++
Sbjct: 395 QFEECLELIEKMKQIGCHP--------------------------------DLLIYNVVI 422

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN-- 457
              C      +AV+L+N M   G +P    FV ++ G      + EA + ++ +V     
Sbjct: 423 RLACNFREVKEAVRLWNEMEANGLSPGADMFVIMINGFTSQGYLIEACSHFKEMVSRGIF 482

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY---PLDVVSYTVAIRGLLEGGRTE 514
            A       ++++ L+   +   A  ++   I  K     L+V ++T+ I  L   G  +
Sbjct: 483 SAPQYGTLKSLLNTLLRDDKLEMAKDVW-SCISNKTSSCELNVSAWTIWIHALFAKGHVK 541

Query: 515 EA--YILYSQMKHIAVPPNAY-------------------TYRVMLLSFCKERNIKMV-K 552
           EA  Y L      +   PN Y                   T +VM ++  +E + KM  K
Sbjct: 542 EACSYCLDMMEMDLMPQPNTYVKLMKGLNKLYNRTIAAEITEKVMKMASEREMSFKMYKK 601

Query: 553 RLLQDVID 560
           R  +D+I+
Sbjct: 602 RGEEDLIE 609



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 78/336 (23%), Positives = 145/336 (43%), Gaps = 19/336 (5%)

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
           +LW       C    V   S++K   + + F   +  ++ +  E   P+L+   + +  +
Sbjct: 121 FLWATKQPGYCHSYEVC-KSMVKILSKMRQFGAVWGLIEEMRKEN--PELIEPELFVVLI 177

Query: 336 SKMGSYD---DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL--EVEA 390
            +  S +    A++V D + +    PD Y F  LL  +C +G      K+   +  ++  
Sbjct: 178 RRFASANMVKKAVEVLDEMPKYGFEPDEYVFGCLLDALCKNGSVKDASKVFEDMREKIPP 237

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           +L  + +LL  +C+ G   +A ++   M + G  PD   F  LL G   A K+ +A ++ 
Sbjct: 238 NLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLL 297

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEA-GRCHKAIQLFRRAIVEKY--PLDVVSYTVAIRGL 507
             +       NA+ +T ++  L     R  +A+++F    +E+Y    D+V+YT  I G 
Sbjct: 298 NDMRKRGYEPNANCYTVLIQALCRTEKRMDEAMRVF--VEMERYGCEADIVTYTALISGF 355

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD- 566
            + G  ++ Y +   M+   V P+  TY  +L++  K+   +    L++ +       D 
Sbjct: 356 CKWGMIDKGYSVLDDMRKKGVMPSQVTYMQILVAHEKKEQFEECLELIEKMKQIGCHPDL 415

Query: 567 --YHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
             Y+  IRL      F     AV    EM   GL P
Sbjct: 416 LIYNVVIRLA---CNFREVKEAVRLWNEMEANGLSP 448


>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 135/600 (22%), Positives = 243/600 (40%), Gaps = 63/600 (10%)

Query: 64  LIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGR---FETVRGIVGELARVG------ 114
           ++AL F  W  KQ     +     H++ + T +  R   +   + I+  LA+        
Sbjct: 33  VLALKFLKWVIKQPGL--EPNHLTHILGITTHVLVRARLYGYAKSILKHLAQKNSGSNFL 90

Query: 115 ----------CVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVL 164
                     C      F L +R+Y R  M G  +  F  M   GF P+ +  N++M  +
Sbjct: 91  FGVLMDTYPLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASM 150

Query: 165 FKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV 220
            K  R  L     K+       PN  SFNI +  LC    +    +++ MM R G+ P +
Sbjct: 151 VKNCRAHLVWXFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTI 210

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
             +  LL+  CK GR   A  L+  M   G    V  + + ID   R  R      + +K
Sbjct: 211 VSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKK 270

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           M     +PN V+Y +LI GF++     +A    + +     +P+L+ +N+LI+     G+
Sbjct: 271 MRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGN 330

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV----------------- 383
           +++AL + D +    + P+  T  +LL+ +  S +F +   ++                 
Sbjct: 331 FEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTV 390

Query: 384 ---------------------CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
                                C   V  D++ ++ L++ FCK G  N+A ++ + +  +G
Sbjct: 391 MIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREG 450

Query: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI 482
           F P+N  F  L+   C    + E +  Y  + +N    +     ++V  L E G+  +A 
Sbjct: 451 FVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAE 510

Query: 483 QLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
           +            + V++   I G    G    A+ ++ +M      P+ +TY  +L   
Sbjct: 511 EFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVL 570

Query: 543 CKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
           CK +N    ++LL+ +    + +D  +   L   I K  +   AV    EM    ++PD 
Sbjct: 571 CKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDS 630



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 126/556 (22%), Positives = 231/556 (41%), Gaps = 87/556 (15%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           ++  Y   + S++ ++S   +  GRF+    ++  +   G      T+ +F+    R   
Sbjct: 202 ERNGYVPTIVSYNTLLSWCCK-KGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSR 260

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE----TQLPNFLSFNI 190
                    +M     TPN  + N +++   K G++ +  +V  E       PN +++NI
Sbjct: 261 SAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNI 320

Query: 191 ALCNLC---------KLNDVSNVKDV------IGMMVRKGFYPNVRMFEIL--------- 226
            +   C         +L DV    DV      IG ++  G Y + + F++          
Sbjct: 321 LINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLL-NGLYKSAK-FDVARNILERYSI 378

Query: 227 ----LNC---------FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
               LNC          C+ G + EA+QLL  M   G    +  ++VLI+GF ++  L+ 
Sbjct: 379 NRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNK 438

Query: 274 AGYLWEKMVQNGCSPNVVTYT-----------------------------------SLIK 298
           A  +  K+ + G  PN V ++                                   SL+ 
Sbjct: 439 AKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVA 498

Query: 299 GFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP 358
              E      A  FL  +   G  P+ V  + +I+  + +G    A  V+D ++     P
Sbjct: 499 SLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHP 558

Query: 359 DSYTFCSLLSTVCLSGRF----SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKL 414
             +T+ SLL  +C    F     LL KL C + +  D + YN L+    K+G   +AV+L
Sbjct: 559 SPFTYGSLLKVLCKGQNFWEARKLLKKLHC-IPLAVDTISYNTLIVEISKSGNLLEAVRL 617

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP--AVNAHVHTAIVDRL 472
           +  M+     PD+Y++  +L GL    ++  A  ++ G +M      +N+ V+T  +D L
Sbjct: 618 FEEMIQNNILPDSYTYTCILSGLIREGRLVCAF-IFLGRLMQKEILTLNSIVYTCFIDGL 676

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
            +AG+   A+ LF+    +   LD+++      G    G+   A  L S+ ++  V PN 
Sbjct: 677 FKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNL 736

Query: 533 YTYRVMLLSFCKERNI 548
            T+ ++L  + + ++I
Sbjct: 737 TTFNILLHGYSRGQDI 752



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 100/452 (22%), Positives = 183/452 (40%), Gaps = 82/452 (18%)

Query: 153 NTFARNIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVI 208
           N  +  +++D L + G +D    L I++ K+   P+ ++F++ +   CK+ +++  K+V+
Sbjct: 384 NCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVM 443

Query: 209 GMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRL 268
             + R+GF PN  +F  L+   CK+G + E  +    M   G +        L+      
Sbjct: 444 SKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCEN 503

Query: 269 RRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP----- 323
            +L  A      + + G  PN VT+  +I G+      S AFS  D + S GH P     
Sbjct: 504 GKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTY 563

Query: 324 ------------------------------DLVFHNVLIDCLSKMGSYDDALDVYDGLLE 353
                                         D + +N LI  +SK G+  +A+ +++ +++
Sbjct: 564 GSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQ 623

Query: 354 LKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPN 409
             ++PDSYT+  +LS +   GR    F  L +L+    +  + +VY   +    KAG   
Sbjct: 624 NNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSK 683

Query: 410 QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
            A+ L+  M +KG + D                          I +N          +I 
Sbjct: 684 AALYLFKEMEEKGLSLD-------------------------LIALN----------SIT 708

Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
           D     G+   A  L  +   +    ++ ++ + + G   G      + LY+ M+     
Sbjct: 709 DGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFF 768

Query: 530 PNAYTYRVMLLSFCK----ERNIKMVKRLLQD 557
           PN  TY  ++L  C     E  IKM+K  + +
Sbjct: 769 PNRLTYHSLILGLCNHGMLELGIKMLKMFIAE 800



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 108/487 (22%), Positives = 209/487 (42%), Gaps = 26/487 (5%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWR-GEMYGMVLEAFDEMGRFGFTPNTF 155
            G+       +  ++R+G V  + TF   +  Y   G+  G     FD+M   G  P+ F
Sbjct: 503 NGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSG-AFSVFDKMISCGHHPSPF 561

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKETQ-LP---NFLSFNIALCNLCKLNDVSNVKDVIGMM 211
               ++ VL K        K+LK+   +P   + +S+N  +  + K  ++     +   M
Sbjct: 562 TYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEM 621

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLG-LMITLGTSLSVNAWTVLIDGFRRLRR 270
           ++    P+   +  +L+   + GR+  A+  LG LM     +L+   +T  IDG  +  +
Sbjct: 622 IQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQ 681

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME-AKMFSIAFSFLDMLESEGHAPDLVFHN 329
              A YL+++M + G S +++   S+  G+    K+FS A S +    ++   P+L   N
Sbjct: 682 SKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFS-ASSLISKTRNKNVIPNLTTFN 740

Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE 389
           +L+   S+         +Y+ +      P+  T+ SL+  +C  G   L  K++     E
Sbjct: 741 ILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAE 800

Query: 390 A---DLVVYNALLSYFCKAGFPNQAVKLYNTM------LDKGFTPDNYSFVGLLRGLCGA 440
           +   D + +N L+   C+    ++ + L + M      LDK  T    + V L+R     
Sbjct: 801 SSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKD-TQKAVTDV-LVR----- 853

Query: 441 RKIDEAINVYQGIVMNNPAV-NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
           R + +   V+   ++    +  +  +  ++ R+   G    A +L  + +     LD  +
Sbjct: 854 RMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAA 913

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
               +RGL   G+ EEA  +  +M  +   P   T+  ++  FCK+ N K    L   + 
Sbjct: 914 ECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILME 973

Query: 560 DARIELD 566
             R++LD
Sbjct: 974 HYRVKLD 980



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 94/439 (21%), Positives = 185/439 (42%), Gaps = 17/439 (3%)

Query: 136  GMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGR-----VDLGIKVLKETQLPNFLS 187
            G +LEA   F+EM +    P+++    ++  L + GR     + LG  + KE    N + 
Sbjct: 609  GNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIV 668

Query: 188  FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
            +   +  L K         +   M  KG   ++     + + + +MG++  A  L+    
Sbjct: 669  YTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTR 728

Query: 248  TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
                  ++  + +L+ G+ R + +     L+  M ++G  PN +TY SLI G     M  
Sbjct: 729  NKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLE 788

Query: 308  IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS-- 365
            +    L M  +E    D +  N+LI    ++   D  +D+   +   ++  D  T  +  
Sbjct: 789  LGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVT 848

Query: 366  --LLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
              L+  +     F  + +++    +      Y  ++   C+ G    A KL + M+  G 
Sbjct: 849  DVLVRRMVSQNYFVFMHEMLKKGFIPTS-KQYCTMMKRMCRVGDIQGAFKLKDQMVALGI 907

Query: 424  TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
            + D+ +   ++RGL    KI+EA+ + Q ++           T ++    +     +A  
Sbjct: 908  SLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHN 967

Query: 484  LFRRAIVEKY--PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
            L  + ++E Y   LD+V+Y V I      G    A   Y ++K   + PN  TYRV++ +
Sbjct: 968  L--KILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSA 1025

Query: 542  FCKERNIKMVKRLLQDVID 560
               +  +   + +L+D+ D
Sbjct: 1026 ISTKHYVSRGEIVLKDLND 1044


>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
 gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
          Length = 807

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 123/469 (26%), Positives = 214/469 (45%), Gaps = 55/469 (11%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDV 201
           F+EM +    PN +   +V++ L K G+V    +VL+E  +P   ++   +   CK  D+
Sbjct: 215 FEEM-KHTAIPNNWTYTVVINGLVKAGKVAEAERVLQEMPVPTLANYTSVIGGHCKAGDM 273

Query: 202 SNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVL 261
                ++  M RKG+  +   +  L++  C++  I  AY+LL  M +      +  + +L
Sbjct: 274 GKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDIL 333

Query: 262 IDGFRRLRRLDMAGYLWEKMV-QNGCSPNVVTYTSLIKGFMEAKMFSIAFS-FLDMLESE 319
           I G  R +RL  A  L   +  ++ C+PNVV+Y +LI GF +A   + A+  FL+M+ + 
Sbjct: 334 IAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMV-TA 392

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
           G  PD+V ++ LI  L   G   +A    + ++  K++P    + S++S +C +G     
Sbjct: 393 GQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAA 452

Query: 380 PKLVCGLEV---EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
             +   +     + +L VYN+L+   CK G    A      M ++G +PD  ++  L+ G
Sbjct: 453 STVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVG 512

Query: 437 LCGARKIDEAINVY-----QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
           LC   + DEA ++Y     QGI ++  + N          +I + RC +  Q   R +  
Sbjct: 513 LCRWSRTDEACDLYVRSLEQGIEISETSCNV---------VIASLRCLEQAQRVLRVV-- 561

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
                           L  G +                P A+ Y  ++ S CKE N+   
Sbjct: 562 ----------------LATGNS----------------PTAFFYATVIESLCKENNLAEA 589

Query: 552 KRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           ++LL+D+I A I+ D  T   L   + +   +  A+  L EM  LG  P
Sbjct: 590 RQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKP 638



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 108/435 (24%), Positives = 191/435 (43%), Gaps = 43/435 (9%)

Query: 148 FGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSN 203
           F  T +T+  N   + L + G+ +   ++ KE      +P+ +++ I +  LC    +  
Sbjct: 86  FRHTVHTY--NCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKL 143

Query: 204 VKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLID 263
              +   MV +G  P V   + LLN  CK G +  A +    M ++  + +   WT+LID
Sbjct: 144 ACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSSIPCAAT---WTILID 200

Query: 264 GFRRLRRLDMAGYLWEKM------------------------------VQNGCSPNVVTY 293
           G  R  R+D A Y +E+M                              +Q    P +  Y
Sbjct: 201 GLFRAIRVDEACYYFEEMKHTAIPNNWTYTVVINGLVKAGKVAEAERVLQEMPVPTLANY 260

Query: 294 TSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE 353
           TS+I G  +A     A+  L+ ++ +G+  D + +N LI    ++   D A ++ + +  
Sbjct: 261 TSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKS 320

Query: 354 LKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEAD----LVVYNALLSYFCKAGFPN 409
              VPD +T+  L++ +C + R S    L+  L  E D    +V YN L+  F KA   N
Sbjct: 321 NDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVN 380

Query: 410 QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
            A +L+  M+  G  PD  ++  L+RGLC A +  EA +  + +V         V+++++
Sbjct: 381 DAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVI 440

Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
             L  AG    A  +F   +      ++  Y   I GL + GR  +A +   +M      
Sbjct: 441 SGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCS 500

Query: 530 PNAYTYRVMLLSFCK 544
           P+  TY  +++  C+
Sbjct: 501 PDGVTYGTLIVGLCR 515



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 115/463 (24%), Positives = 200/463 (43%), Gaps = 12/463 (2%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD-----LGIKVLKETQLPNFLSFNIALCN 194
           E  +EM    F P+ F  +I++  L +  R+      LG    ++   PN +S+N  +  
Sbjct: 313 ELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDG 372

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
             K   V++   +   MV  G +P+V  +  L+   C  GR +EA+  L  M+       
Sbjct: 373 FSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPK 432

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           V  ++ +I G  R   LD A  +++ MV NGC PN+  Y SLI G  +      A   + 
Sbjct: 433 VPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVK 492

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL--STVCL 372
            +   G +PD V +  LI  L +    D+A D+Y   LE + +  S T C+++  S  CL
Sbjct: 493 EMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLE-QGIEISETSCNVVIASLRCL 551

Query: 373 SGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
                +L ++V           Y  ++   CK     +A +L   M+  G  PD  +   
Sbjct: 552 EQAQRVL-RVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDA 610

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           L+  +C   K   A+   + +V      +   ++ +++ L +AG+  +A  + RR I   
Sbjct: 611 LVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHT 670

Query: 493 --YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
             +P D + Y   I       + EEA  +  ++K      +   Y  +L    + RN++M
Sbjct: 671 SCFP-DELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGLFRTRNLQM 729

Query: 551 VKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEM 593
           V  LL+++      ++  T   L +   +   +  AV  L EM
Sbjct: 730 VYELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSEM 772



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 92/423 (21%), Positives = 180/423 (42%), Gaps = 42/423 (9%)

Query: 151 TPNTFARNIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKD 206
           TPN  + N ++D   K  RV+    L ++++   Q P+ ++++  +  LC     S    
Sbjct: 360 TPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHS 419

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
            +  MV K   P V ++  +++  C+ G +  A  +   M+  G   ++  +  LI G  
Sbjct: 420 YLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLC 479

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF----------------------MEAK 304
           +  RL  A    ++M + GCSP+ VTY +LI G                       +   
Sbjct: 480 KTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISET 539

Query: 305 MFSIAFSFLDMLE----------SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
             ++  + L  LE          + G++P   F+  +I+ L K  +  +A  + + ++  
Sbjct: 540 SCNVVIASLRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGA 599

Query: 355 KLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQ 410
            + PD  T  +L+  +C   +     + L ++V  L  +  +  Y+ LL+   KAG P++
Sbjct: 600 GIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMV-RLGSKPSVGTYSTLLNALFKAGKPSE 658

Query: 411 A-VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
           A V L   +      PD   +VGL+       +++EA NV Q +       +   +  ++
Sbjct: 659 AHVVLRRLISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLL 718

Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
             L          +L R     ++ ++  ++ + I+G    G+T+ A  + S+MK +  P
Sbjct: 719 KGLFRTRNLQMVYELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSEMKKVLTP 778

Query: 530 PNA 532
             A
Sbjct: 779 SAA 781



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 4/165 (2%)

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            YN       + G   +A +L+     +   PD+ ++  L+RGLC   K+  A ++Y+ +
Sbjct: 92  TYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLYEEM 151

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
           V             +++ L ++G    A++ F +  +   P    ++T+ I GL    R 
Sbjct: 152 VDRGLRPVVLTCKFLLNALCKSGNLELALRYFEK--MSSIPC-AATWTILIDGLFRAIRV 208

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           +EA   + +MKH A+ PN +TY V++    K   +   +R+LQ++
Sbjct: 209 DEACYYFEEMKHTAI-PNNWTYTVVINGLVKAGKVAEAERVLQEM 252



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 87/215 (40%), Gaps = 8/215 (3%)

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
           E+  D + Y  L+   C  G    A  LY  M+D+G  P   +   LL  LC +  ++ A
Sbjct: 120 ELIPDSITYGILIRGLCNFGKLKLACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELA 179

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
           +  ++ +   +    A   T ++D L  A R  +A   F        P +  +YTV I G
Sbjct: 180 LRYFEKM---SSIPCAATWTILIDGLFRAIRVDEACYYFEEMKHTAIP-NNWTYTVVING 235

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           L++ G+  EA  +  +M      P    Y  ++   CK  ++     LL+D+     + D
Sbjct: 236 LVKAGKVAEAERVLQEMP----VPTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGD 291

Query: 567 YHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
             T   L     +      A   L EM +   +PD
Sbjct: 292 NLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPD 326



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 48/94 (51%)

Query: 463 HVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQ 522
           H +    + LI  G+C +A +LF+    ++   D ++Y + IRGL   G+ + A  LY +
Sbjct: 91  HTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLYEE 150

Query: 523 MKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
           M    + P   T + +L + CK  N+++  R  +
Sbjct: 151 MVDRGLRPVVLTCKFLLNALCKSGNLELALRYFE 184


>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 763

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 135/567 (23%), Positives = 246/567 (43%), Gaps = 14/567 (2%)

Query: 45  PIILAPHIVHSTLLNCPSD-LIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETV 103
           P +L  H+  +T++ C  D + AL  F    K+  + H + ++  +I  +  L G+FE +
Sbjct: 3   PPLLPKHV--TTVIRCQKDPMKALEMFNSMRKEDGFKHTLSTYRSIIEKLG-LYGKFEAM 59

Query: 104 RGIVGELAR-VGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMD 162
             ++ ++ + VG  +    ++  ++ Y R       +  F+ M  +   P  F+ N +M 
Sbjct: 60  EEVLVDMRQNVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMS 119

Query: 163 VLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYP 218
           +L   G  D   KV    +     P+  SF I + + C+ +       ++  M  +G   
Sbjct: 120 ILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEM 179

Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
           NV  +  ++  F +     E Y+L G M+  G SL ++ +  L+    +   +     L 
Sbjct: 180 NVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLL 239

Query: 279 EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
           +K+++ G  PN+ TY   I+G  +      A   +  L  +G  PD+V +N LI  L K 
Sbjct: 240 DKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKN 299

Query: 339 GSYDDALDVYDG-LLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVV 394
             + +A +VY G L+   L PDS+T+ +L++  C  G   L  +++          D   
Sbjct: 300 SKFQEA-EVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFT 358

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           Y +L+   C  G  N+A+ L+N  L KG  P+   +  L++GL     I EA  +   + 
Sbjct: 359 YRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMS 418

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
                        +V+ L + G    A  L +  I + Y  D+ ++ + I G     + E
Sbjct: 419 EKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKME 478

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLT 574
            A  +   M    V P+ YTY  +L   CK    + V    + +++     +  T   L 
Sbjct: 479 NALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILL 538

Query: 575 KFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           + + ++H    A+  L EM N  + PD
Sbjct: 539 ESLCRYHKLDKALGLLEEMKNKSVNPD 565



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 128/534 (23%), Positives = 234/534 (43%), Gaps = 9/534 (1%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           + R    DV SF   +    R T R      ++  ++  GC +    +   +  ++    
Sbjct: 138 RDRGITPDVYSFTIRMKSFCR-TSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENF 196

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNI 190
                E F +M   G +      N ++ VL K G V     L  KV+K   LPN  ++N 
Sbjct: 197 KDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNF 256

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +  LC+  ++     ++G ++ +G  P+V  +  L+   CK  +  EA   LG ++  G
Sbjct: 257 FIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEG 316

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
                  +  LI G+ +   + +A  +    V NG  P+  TY SLI G       + A 
Sbjct: 317 LEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRAL 376

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
           +  +    +G  P+++ +N LI  LS  G   +A  +   + E  L+P+  TF  L++ +
Sbjct: 377 ALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGL 436

Query: 371 CLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           C  G  S    L K++       D+  +N L+  +        A+++ + M+D G  PD 
Sbjct: 437 CKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDV 496

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
           Y++  LL GLC   K ++ +  Y+ +V    A N      +++ L    +  KA+ L   
Sbjct: 497 YTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEE 556

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI-AVPPNAYTYRVMLLSFCKER 546
              +    D V++   I G  + G  + AY L+ +M+ +  V  +  TY +++ +F ++ 
Sbjct: 557 MKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKL 616

Query: 547 NIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           N+ M ++L Q+++D  +  D +T   +     K  +       L+EM   G IP
Sbjct: 617 NVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIP 670



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/290 (23%), Positives = 127/290 (43%), Gaps = 6/290 (2%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
           ++    +VQ+F+ +++ + ++ G      G+V  +   G      TF + +  Y      
Sbjct: 419 EKGLIPEVQTFNILVNGLCKM-GCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKM 477

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIA 191
              LE  D M   G  P+ +  N +++ L K  + +  ++  K    +   PN  +FNI 
Sbjct: 478 ENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNIL 537

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL-G 250
           L +LC+ + +     ++  M  K   P+   F  L++ FCK G +  AY L   M  +  
Sbjct: 538 LESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYM 597

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
            S S   + ++I  F     + MA  L+++MV     P+  TY  ++ GF +     + +
Sbjct: 598 VSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGY 657

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
            FL  +   G  P L     +I+CL       +A  +   +++  LVP++
Sbjct: 658 KFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA 707



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 109/251 (43%), Gaps = 9/251 (3%)

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
           + E  +  YNA++S    +G+ +QA K+Y  M D+G TPD YSF   ++  C   +   A
Sbjct: 106 DCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAA 165

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
           + +   +      +N   +  +V    E     +  +LF + +     L + ++   +  
Sbjct: 166 LRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHV 225

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           L + G  +E   L  ++    V PN +TY   +   C++  +    R++  +ID   + D
Sbjct: 226 LCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPD 285

Query: 567 YHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM--------WRKLGLLS-DETMTP 617
             T   L   + K      A   L ++ N GL PD          + K G++   E +  
Sbjct: 286 VVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILV 345

Query: 618 VSLFDGFVPCE 628
            ++F+GFVP E
Sbjct: 346 NAVFNGFVPDE 356


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 118/500 (23%), Positives = 222/500 (44%), Gaps = 17/500 (3%)

Query: 115 CVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI 174
           C      F L +R Y +        EAF  +   GFT +  A N ++  L +IG V+L  
Sbjct: 161 CGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAW 220

Query: 175 KVLKETQLP----NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCF 230
            V +E        N  + NI +  LCK   +  V   +  +  KG YP++  +  L++ +
Sbjct: 221 GVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAY 280

Query: 231 CKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNV 290
              G + EA++L+  M   G S  V  +  +I+G  +  + + A  ++ +M+++G SP+ 
Sbjct: 281 SSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDS 340

Query: 291 VTYTSLI-KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
            TY SL+ +   +  +      F DM  S    PDLV  + ++   ++ G+ D AL  ++
Sbjct: 341 TTYRSLLMEACKKGDVVETEKVFSDM-RSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN 399

Query: 350 GLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAG 406
            + E  L+PD+  +  L+   C  G  S+   L   +  +    D+V YN +L   CK  
Sbjct: 400 SVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 459

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
              +A KL+N M ++   PD+Y+   L+ G C    +  A+ ++Q +      ++   + 
Sbjct: 460 MLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYN 519

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
            ++D   + G    A +++   + ++     +SY++ +  L   G   EA+ ++ +M   
Sbjct: 520 TLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISK 579

Query: 527 AVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKF-----H 581
            + P       M+  +C+  N    +  L+ +I      D    I     I+ F      
Sbjct: 580 NIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPD---CISYNTLIYGFVREENM 636

Query: 582 SSSSAVNQLVEMCNLGLIPD 601
           S +  + + +E    GL+PD
Sbjct: 637 SKAFGLVKKMEEEQGGLVPD 656



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 120/542 (22%), Positives = 228/542 (42%), Gaps = 16/542 (2%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRG-- 132
           + + +   + + + +I  + R+ G  E   G+  E++R G  I   T  + +    +   
Sbjct: 192 RSKGFTVSIDACNALIGSLVRI-GWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGK 250

Query: 133 -EMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLS 187
            E  G  L    E G +   P+    N ++      G ++   +++         P   +
Sbjct: 251 MEKVGTFLSQVQEKGVY---PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYT 307

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           +N  +  LCK       K+V   M+R G  P+   +  LL   CK G + E  ++   M 
Sbjct: 308 YNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMR 367

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
           +      +  ++ ++  F R   LD A   +  + + G  P+ V YT LI+G+    M S
Sbjct: 368 SRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMIS 427

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
           +A +  + +  +G A D+V +N ++  L K     +A  +++ + E  L PDSYT   L+
Sbjct: 428 VAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILI 487

Query: 368 STVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
              C  G      +L   ++   +  D+V YN LL  F K G  + A +++  M+ K   
Sbjct: 488 DGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEIL 547

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           P   S+  L+  LC    + EA  V+  ++  N      +  +++     +G        
Sbjct: 548 PTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESF 607

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI--AVPPNAYTYRVMLLSF 542
             + I E +  D +SY   I G +      +A+ L  +M+     + P+ +TY  +L  F
Sbjct: 608 LEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGF 667

Query: 543 CKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
           C++  +K  + +L+ +I+  +  D  T   +        + + A     EM   G  PD+
Sbjct: 668 CRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727

Query: 603 MW 604
            +
Sbjct: 728 KF 729



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 72/351 (20%), Positives = 154/351 (43%), Gaps = 7/351 (1%)

Query: 256 NAWTVLIDGFRR--LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
           +A + L+   RR  + RL++   L      + C  N   +  LI+ +++A+    A    
Sbjct: 131 DAQSCLLRMIRRSGVSRLEIVNSLDSTF--SNCGSNDSVFDLLIRTYVQARKLREAHEAF 188

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
            +L S+G    +   N LI  L ++G  + A  VY  +    +  + YT   +++ +C  
Sbjct: 189 TLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKD 248

Query: 374 GRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           G+   +   +  ++   V  D+V YN L+S +   G   +A +L N M  KGF+P  Y++
Sbjct: 249 GKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTY 308

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             ++ GLC   K + A  V+  ++ +  + ++  + +++    + G   +  ++F     
Sbjct: 309 NTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRS 368

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
                D+V ++  +      G  ++A + ++ +K   + P+   Y +++  +C++  I +
Sbjct: 369 RDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISV 428

Query: 551 VKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
              L  +++     +D  T   +   + K      A     EM    L PD
Sbjct: 429 AMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPD 479


>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
          Length = 704

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 137/548 (25%), Positives = 244/548 (44%), Gaps = 50/548 (9%)

Query: 116 VIKAQTFLLF------LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
           +++  TF+ F      L  Y +    G        M + GF  N +  NI++  L +   
Sbjct: 98  MLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLE 157

Query: 170 VDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEI 225
               + +L+E +    +P+  S+N  +   C+  ++    ++   M   G   ++  + I
Sbjct: 158 CGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGI 217

Query: 226 LLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
           L++ FCK G++ EA   L  M  +G    +  +T LI GF     LD    L++++++ G
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277

Query: 286 CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL 345
            SP  +TY +LI+GF +      A    + +   G  P++  +  LID L  +G   +AL
Sbjct: 278 DSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEAL 337

Query: 346 DVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYF 402
              + ++E    P++ T+  +++ +C  G  +    + +L+       D + YN LL   
Sbjct: 338 QPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGL 397

Query: 403 CKAGFPNQAVKLYNTML-DKGFT-PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
           C  G  ++A KL   ML D  +T PD  S+  L+ GLC   ++ +A+++Y  +V    A 
Sbjct: 398 CAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAG 457

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
           +      +++  ++AG  +KA++L+++    K   +  +YT  I G  + G    A  L 
Sbjct: 458 DRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLL 517

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ---------DVIDARIELDYHTSI 571
            +M+   + P+ + Y  +L S CKE ++    RL +         DV+   I +D     
Sbjct: 518 CKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGS--- 574

Query: 572 RLTKFIFKFHSSSSAVNQLVEMCNLGLIPD--------EMWRKLGLLSDETMTPVSLFD- 622
                  K     SA + LV M   GL PD          + KLG L +     +S FD 
Sbjct: 575 ------LKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDE----AISFFDK 624

Query: 623 ----GFVP 626
               GF P
Sbjct: 625 MVDSGFEP 632



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 113/506 (22%), Positives = 223/506 (44%), Gaps = 9/506 (1%)

Query: 105 GIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVL 164
           G++  + + G         + L+   R    G  +    EM R    P+ F+ N V+   
Sbjct: 128 GVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGF 187

Query: 165 FKIGRVDLGIKVLKETQLP----NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV 220
            +   ++  +++  E +      + +++ I +   CK   +      +  M   G   ++
Sbjct: 188 CEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADL 247

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
            ++  L+  FC  G +     L   ++  G S     +  LI GF +L +L  A  ++E 
Sbjct: 248 VVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEF 307

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           M++ G  PNV TYT LI G         A   L+++  +   P+ V +N++I+ L K G 
Sbjct: 308 MIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGL 367

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL-----EVEADLVVY 395
             DA+++ + + + +  PD+ T+  LL  +C  G      KL+  +       + D++ Y
Sbjct: 368 VADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISY 427

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
           NAL+   CK    +QA+ +Y+ +++K    D  +   LL     A  +++A+ +++ I  
Sbjct: 428 NALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISD 487

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
           +    N+  +TA++D   + G  + A  L  +  V +    V  Y   +  L + G  ++
Sbjct: 488 SKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQ 547

Query: 516 AYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTK 575
           A+ L+ +M+     P+  ++ +M+    K  +IK  + LL  +  A +  D  T  +L  
Sbjct: 548 AWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLIN 607

Query: 576 FIFKFHSSSSAVNQLVEMCNLGLIPD 601
              K      A++   +M + G  PD
Sbjct: 608 RFLKLGYLDEAISFFDKMVDSGFEPD 633



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 113/483 (23%), Positives = 217/483 (44%), Gaps = 17/483 (3%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWR-GEM-YGMVLEAFDEMGRFGFTPNT 154
            G+ +   G + E+  +G       +   +R +   GE+  G  L  FDE+   G +P  
Sbjct: 225 AGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKAL--FDEVLERGDSPCA 282

Query: 155 FARNIVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGM 210
              N ++    K+G++    ++    ++    PN  ++   +  LC +         + +
Sbjct: 283 ITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNL 342

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M+ K   PN   + I++N  CK G +A+A +++ LM    T      + +L+ G      
Sbjct: 343 MIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGD 402

Query: 271 LDMAGYLWEKMVQNGC--SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH 328
           LD A  L   M+++     P+V++Y +LI G  +      A    D+L  +  A D V  
Sbjct: 403 LDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTT 462

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL-- 386
           N+L++   K G  + A++++  + + K+V +S T+ +++   C +G  ++   L+C +  
Sbjct: 463 NILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRV 522

Query: 387 -EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
            E++  +  YN LLS  CK G  +QA +L+  M      PD  SF  ++ G   A  I  
Sbjct: 523 SELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKS 582

Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
           A ++  G+     + +   ++ +++R ++ G   +AI  F + +   +  D       ++
Sbjct: 583 AESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLK 642

Query: 506 GLLEGGRTEEAYILYSQM--KHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
             +  G T++   L  ++  K I V     T  VM        N+ + KRLL+ V D + 
Sbjct: 643 YCISQGETDKLTELVKKLVDKDI-VLDKELTCTVMDYMCNSSANMDLAKRLLR-VTDDKE 700

Query: 564 ELD 566
           E D
Sbjct: 701 ERD 703



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 84/395 (21%), Positives = 172/395 (43%), Gaps = 53/395 (13%)

Query: 211 MVRKGFYPNVRMFEILLNCFCKMG------------RIAEAYQLLGLMITLGTSLSVNAW 258
           +VRK   P  R++  L+N F +              ++  A  +    +  G+SL+  A 
Sbjct: 19  VVRKLLNP--RVYSKLVNAFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSGSSLAF-AG 75

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
           + L+    R R  ++A   + KM++     N V+ + L++ +++ +    AF  L ++  
Sbjct: 76  SNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF--------------- 363
            G A ++  HN+L+  L +      A+ +   +    L+PD +++               
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195

Query: 364 ------------CS--------LLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLS 400
                       CS        L+   C +G+       +  ++   +EADLVVY +L+ 
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
            FC  G  ++   L++ +L++G +P   ++  L+RG C   ++ EA  +++ ++      
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP 315

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
           N + +T ++D L   G+  +A+Q     I +    + V+Y + I  L + G   +A  + 
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIV 375

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
             MK     P+  TY ++L   C + ++    +LL
Sbjct: 376 ELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLL 410


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 120/487 (24%), Positives = 211/487 (43%), Gaps = 12/487 (2%)

Query: 102 TVRGIVGELARVGCVIKAQTFLLF---LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           ++R +  EL     V+  +T++L+   +R     +      E FD M   G  P+  A N
Sbjct: 101 SIREVFNELGVARGVLGIKTYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACN 160

Query: 159 IVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
            ++ +  K  R +    L  ++ +     + ++FNI +  LCK   +   K+ IG+M   
Sbjct: 161 DMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEAL 220

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           G  PNV  +  +++ +C  GR+  A  +  LM   G       +   I G  +  +L+ A
Sbjct: 221 GIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEA 280

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             + EKM + G  P  VTY +LI G+       +AF + D +  EG  P +  +N+LI  
Sbjct: 281 SGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHA 340

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEA 390
           L      D+A  +   + E  LVPDS T+  L++  C  G     F+L  +++    ++ 
Sbjct: 341 LFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISK-GIQP 399

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
             V Y +L+    K G   QA  L+  ++ KG  PD   F  L+ G C    +D A  + 
Sbjct: 400 TRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAML 459

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
           + +       +      ++      G+   A +L           D +SY   I G  + 
Sbjct: 460 KEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKR 519

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
           G  ++A+ +  +M  I   P   TY  ++   CK       ++LL+++I   I  + +T 
Sbjct: 520 GDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTY 579

Query: 571 IRLTKFI 577
           + L + I
Sbjct: 580 LSLIEGI 586



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 99/433 (22%), Positives = 180/433 (41%), Gaps = 49/433 (11%)

Query: 83  VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF 142
           V + + M+S+  + + R E    +  E+ R+       TF + + +  +        E  
Sbjct: 156 VHACNDMLSLFLK-SNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFI 214

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVD-----------LGIK------------VLKE 179
             M   G  PN    N ++      GRV+            G+K            + KE
Sbjct: 215 GLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKE 274

Query: 180 TQL----------------PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMF 223
            +L                P  +++N  +   C   ++    D    MVR+G  P V  +
Sbjct: 275 GKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTY 334

Query: 224 EILLNCF---CKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
            +L++     CKM    EA  ++  M   G       + +LI+G+ R   +  A  L ++
Sbjct: 335 NMLIHALFLDCKMD---EADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDE 391

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           M+  G  P  VTYTSLI    +      A    + +  +G  PDL+  N LID     G+
Sbjct: 392 MISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGN 451

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNA 397
            D A  +   + ++K+VPD  TF +L+   C  G+     +L+  ++   ++ D + YN 
Sbjct: 452 MDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNT 511

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
           L+S + K G    A ++ + ML  GF P   ++  L++GLC   + D A  + + ++   
Sbjct: 512 LISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKG 571

Query: 458 PAVNAHVHTAIVD 470
              N + + ++++
Sbjct: 572 ITPNDNTYLSLIE 584



 Score = 47.8 bits (112), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 38/171 (22%), Positives = 76/171 (44%), Gaps = 6/171 (3%)

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTA--IVDRLIEAGRCHKAIQLFRRAIV 490
           L+R  C  ++ D+A   +   +M    V  HVH    ++   +++ R  KA  L+     
Sbjct: 127 LIRACCELKRGDDAFECFD--MMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFR 184

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
            +    VV++ + I  L + G+ ++A      M+ + + PN  TY  ++  +C    ++ 
Sbjct: 185 MRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEG 244

Query: 551 VKRLLQDVIDAR-IELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
             R++ D++  R ++ D +T       + K      A   L +M  +GL P
Sbjct: 245 A-RMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRP 294


>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
 gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
          Length = 432

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 191/384 (49%), Gaps = 11/384 (2%)

Query: 164 LFKIGRVDLGIKVLKET--QLP-NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV 220
           + + G  +  +++ +E   QLP + +++N+ +   C  +D+     ++  M  +G   N 
Sbjct: 1   MVRAGSHNQALQLFRENPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCND 60

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLG-TSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
           R   I+L   C+ GR+A+A +     + L      V ++T LI+G  +L R+D A  L+ 
Sbjct: 61  RTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFR 120

Query: 280 KMV-QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
           KMV   GC PN  TY +L+ G  +      A + +        APD+V +N L+  L ++
Sbjct: 121 KMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQL 180

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVY 395
           G  D+AL  +  + E   VP   +F ++++ +C + R +   ++   +   +   +LV Y
Sbjct: 181 GRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTY 240

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
           + ++   CK+   ++A +L + M+ +G  PD  ++  L+ G   A ++D A+ + + +V 
Sbjct: 241 SVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVS 300

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
                +   +T ++D+L + GR   A ++FR  +  K   +VV+Y+  I G     R +E
Sbjct: 301 QGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDE 360

Query: 516 AYILYSQMKHIAVPPNAYTYRVML 539
              +   M+ +A  PN  TY  M+
Sbjct: 361 GGKV---MREMACRPNVVTYNTMI 381



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 158/325 (48%), Gaps = 11/325 (3%)

Query: 136 GMVLEAFDEMGRF----GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLS 187
           G V  AFD   +     G  PN F  N ++D L K  R+D    V+ E +     P+ ++
Sbjct: 110 GRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVT 169

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           +N  +  L +L  V         M  +G+ P +  F  ++   C+  R+A+A ++   MI
Sbjct: 170 YNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMI 229

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
                 ++  ++V+IDG  +  +LD A  L ++MV  GC P++V YT L+ GF  A    
Sbjct: 230 DRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLD 289

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A   L  + S+G  PD+V + V+ID L K+G  DDA +++  L+  K  P+  T+ +L+
Sbjct: 290 SALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALI 349

Query: 368 STVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
              C + R     K++  +    ++V YN ++          +A  ++  M + GF PD 
Sbjct: 350 GGYCRASRVDEGGKVMREMACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDA 409

Query: 428 YSFVGLLRGLCGARKIDEAINVYQG 452
            ++ GL R L   R ID+  +V  G
Sbjct: 410 RTYRGLKRAL---RMIDQPPHVLTG 431



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/305 (25%), Positives = 136/305 (44%), Gaps = 36/305 (11%)

Query: 60  CPSD-LIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIK 118
           C  D L A    I  A++RD+  DV +++ +++ + +L GR +       ++   G V  
Sbjct: 143 CKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQL-GRVDEALATFTQMTEEGYVPT 201

Query: 119 AQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK 178
             +F   +    R       LE F+EM    F PN    ++V+D                
Sbjct: 202 LVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVID---------------- 245

Query: 179 ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAE 238
                           LCK + +   + ++  MV +G  P++  +  L+  F   GR+  
Sbjct: 246 ---------------GLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDS 290

Query: 239 AYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIK 298
           A  LL  M++ G    V  +TV+ID   ++ R+D A  ++ ++V N CSPNVVTY++LI 
Sbjct: 291 ALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIG 350

Query: 299 GFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP 358
           G+  A         +  +      P++V +N +I  LS +   ++A  ++  + E   VP
Sbjct: 351 GYCRASRVDEGGKVMREMACR---PNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVP 407

Query: 359 DSYTF 363
           D+ T+
Sbjct: 408 DARTY 412


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/431 (23%), Positives = 200/431 (46%), Gaps = 3/431 (0%)

Query: 175  KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
            ++L+   +P+ + F   L  + K+N    V  +   M   G   ++  F IL++CFC+  
Sbjct: 605  EMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCS 664

Query: 235  RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
            R + A  LLG M+ LG   S+     L++GF +  R   A  L + M + G  PNVV Y 
Sbjct: 665  RFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYN 724

Query: 295  SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
            ++I G  + +  + A      +E +G   D V +N LI  L   G + DA  +   +++ 
Sbjct: 725  TVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKR 784

Query: 355  KLVPDSYTFCSLLSTVCLSGRF---SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQA 411
            K+ P+   F +L+ T    G       L K +    V  +++ YN+L++ FC  G    A
Sbjct: 785  KIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDA 844

Query: 412  VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
              +++ M+ KG  PD  ++  L+ G C ++++++ + ++  +       +A  +  ++  
Sbjct: 845  KHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHG 904

Query: 472  LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
              +AG+ + A ++F R +    P D+V+Y + +  L   G+ E+A ++   ++   +  +
Sbjct: 905  YCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVD 964

Query: 532  AYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLV 591
              TY +++   C+   +K    L + +    ++LD    I +   + +      A     
Sbjct: 965  IITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCT 1024

Query: 592  EMCNLGLIPDE 602
             M   G +P E
Sbjct: 1025 RMKEDGFMPSE 1035



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 114/438 (26%), Positives = 200/438 (45%), Gaps = 43/438 (9%)

Query: 170 VDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
           +DL +++++   LP+ + F   L  +  L     V      M   G   ++  F IL++C
Sbjct: 50  LDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHC 109

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
           FC+  R++ A  +LG M+ LG   S+  +  L+ GF    R+  A  L   MV++G  PN
Sbjct: 110 FCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPN 169

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH-APDLVFHNVL----------------- 331
           VV Y +LI    +    +IA   L+ +E +G  A DLV +N L                 
Sbjct: 170 VVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARIL 229

Query: 332 ------------------IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
                             ID   K G+ D+A ++Y  +L+  + P++ T+ SL++ +C+ 
Sbjct: 230 RDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMH 289

Query: 374 GRFSLLPK---LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           GR     K   L+       ++V YN L++ FCK+      +KL+  M  +G   D +++
Sbjct: 290 GRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTY 349

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             L+ G C   K+  A +++  +V      +   H  ++  L   G    A+  F     
Sbjct: 350 NTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRS 409

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK----ER 546
            +  L +V+Y + I GL +  + EEA+ L+ ++    V P+A TY +M+L  CK      
Sbjct: 410 GEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRRE 469

Query: 547 NIKMVKRLLQDVIDARIE 564
             ++ +R+ +D I  + E
Sbjct: 470 ADELFRRMKEDGIICQAE 487



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 111/457 (24%), Positives = 203/457 (44%), Gaps = 37/457 (8%)

Query: 83   VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF 142
            +  F  +++ + ++  +F+ V  +  ++  +G      +F + +  + R   + + L   
Sbjct: 615  IVDFTRVLTAIAKMN-KFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALL 673

Query: 143  DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV---LKETQL-PNFLSFNIALCNLCKL 198
             +M + GF P+      +++   +  R    + +   + E  L PN + +N  +  LCK 
Sbjct: 674  GKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKN 733

Query: 199  NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
             D++N  ++   M +KG   +   +  L++  C  GR  +A +LL  M+      +V  +
Sbjct: 734  RDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFF 793

Query: 259  TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
            T LID F +   L  A  L+++M++    PN++TY SLI GF        A    D++ S
Sbjct: 794  TALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVS 853

Query: 319  EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL 378
            +G  PD+V +N LI    K    +D + ++  +    LV D++T                
Sbjct: 854  KGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFT---------------- 897

Query: 379  LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
                            YN L+  +C+AG  N A K++N M+D G  PD  ++  LL  LC
Sbjct: 898  ----------------YNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLC 941

Query: 439  GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
               KI++A+ + + +  N   V+   +  I+  +    +  +A  LFR    +   LD +
Sbjct: 942  NNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAI 1001

Query: 499  SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
            +Y   I GL   G   EA  L ++MK     P+   Y
Sbjct: 1002 AYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIY 1038



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 108/435 (24%), Positives = 189/435 (43%), Gaps = 74/435 (17%)

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNI 190
           Y  V+    +M  FG + + ++  I++    +  R+ L +    K++K    P+ ++F  
Sbjct: 81  YETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGS 140

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM---- 246
            L   C  N + +   ++  MV+ G+ PNV ++  L++C CK G +  A +LL  M    
Sbjct: 141 LLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKG 200

Query: 247 ------ITLGTSLS--------------------------VNAWTVLIDGFRRLRRLDMA 274
                 +T  T L+                          V  +T LID F +   LD A
Sbjct: 201 RLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEA 260

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGF-MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
             L+++M+Q+   PN VTY SLI G  M  +++    +F D++ S+G  P++V +N LI+
Sbjct: 261 QELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTF-DLMASKGCFPNVVTYNTLIN 319

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLV 393
              K    +D + ++  +    LV D++T                               
Sbjct: 320 GFCKSRRVEDGMKLFQRMYREGLVGDTFT------------------------------- 348

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            YN L+  +C+ G    A  +++ M+  G TPD  +   LL GLC   +I  A+  +  +
Sbjct: 349 -YNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDM 407

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
                 +    +  ++  L +A +  +A +LF R  VE    D  +YT+ I GL + G  
Sbjct: 408 RSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPR 467

Query: 514 EEAYILYSQMKHIAV 528
            EA  L+ +MK   +
Sbjct: 468 READELFRRMKEDGI 482



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 105/414 (25%), Positives = 184/414 (44%), Gaps = 13/414 (3%)

Query: 50  PHIVHST-LLNCPSDLIALSFFIWCAKQRDYF---HDVQSFDHMISVVTRLTGRFETVRG 105
           P +V  T LL   ++L      I+ ++Q + F   HD+ SF  +I    R + R      
Sbjct: 63  PSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCS-RLSLALS 121

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           I+G++ ++G      TF   L  +               M + G+ PN    N ++D L 
Sbjct: 122 ILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLC 181

Query: 166 KIGRVDLGIKVLKETQ-----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV 220
           K G V++ +++L E +       + +++N  L  LC   +      ++  M ++   P+V
Sbjct: 182 KNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDV 241

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
             F  L++ F K G + EA +L   M+      +   +  LI+G     RL  A   ++ 
Sbjct: 242 FTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDL 301

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           M   GC PNVVTY +LI GF +++           +  EG   D   +N LI    ++G 
Sbjct: 302 MASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGK 361

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF-SLLPKL--VCGLEVEADLVVYNA 397
              A D++  ++   + PD  T C LL  +C++G   S + K   +   E    +V YN 
Sbjct: 362 LRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNI 421

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
           ++   CKA    +A +L+  +  +G  PD  ++  ++ GLC      EA  +++
Sbjct: 422 MIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFR 475



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 151/348 (43%), Gaps = 18/348 (5%)

Query: 264 GFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP 323
           GF    R + A  L+ +MVQ+   P+VV +T L+      + +     F   +E  G + 
Sbjct: 39  GFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISH 98

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLL 379
           DL    +LI C  +      AL +   +++L   P   TF SLL   CL  R    FSL+
Sbjct: 99  DLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLV 158

Query: 380 PKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG-FTPDNYSFVGLLRGLC 438
             +V     E ++VVYN L+   CK G  N A++L N M  KG    D  ++  LL GLC
Sbjct: 159 ASMVKS-GYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLC 217

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
            + +  +A  + + +       +    TA++D  ++ G   +A +L+++ +      + V
Sbjct: 218 YSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTV 277

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           +Y   I GL   GR   A   +  M      PN  TY  ++  FCK R ++   +L Q +
Sbjct: 278 TYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRM 337

Query: 559 IDARIELDYHT------------SIRLTKFIFKFHSSSSAVNQLVEMC 594
               +  D  T             +R+ K IF +  S      ++  C
Sbjct: 338 YREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHC 385



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 131/594 (22%), Positives = 242/594 (40%), Gaps = 79/594 (13%)

Query: 80  FHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVL 139
           F +V +++ +I+   + + R E    +   + R G V    T+   +  Y +     +  
Sbjct: 308 FPNVVTYNTLINGFCK-SRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAK 366

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPN------FLSFNIALC 193
           + F  M   G TP+     I++  L   G  ++G  ++K   + +       +++NI + 
Sbjct: 367 DIFSWMVSCGVTPDIITHCILLHGLCVNG--EIGSAMVKFNDMRSGEKYLGIVAYNIMIH 424

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL---------- 243
            LCK + V    ++   +  +G  P+ R + I++   CK G   EA +L           
Sbjct: 425 GLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGIIC 484

Query: 244 ----GLMITLGTSLSVNAWTVLIDGFRR---LRRLDMAGY-----LWEKMVQNGCSPNVV 291
               G +   GT+  V+  T++I   RR   +   D+  Y     LW  +V  G  P  +
Sbjct: 485 QAEDGHLGEHGTNNQVSLGTIIICPKRRRSIMESGDLYYYYSDTTLWSSLV--GLIP--I 540

Query: 292 TYTSLIKGFM-------------EAKMFSIA---------FSFLDMLESEGHA------- 322
             +S +KGF+             E++ FS A           + + L SE H        
Sbjct: 541 ASSSSVKGFVRRHLLLLERGNNPESRSFSGASHHHHHHHHHHYRERLRSELHCIKFDDAF 600

Query: 323 ------------PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
                       P +V    ++  ++KM  +D  + ++  +  L +  D Y+F  L+   
Sbjct: 601 GLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCF 660

Query: 371 CLSGRFSLLPKLV---CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           C   RFSL   L+     L  +  +V   +LL+ FC+     +AV L ++M + G  P+ 
Sbjct: 661 CRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNV 720

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
             +  ++ GLC  R ++ A+ ++ G+       +A  +  ++  L  +GR   A +L R 
Sbjct: 721 VIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRD 780

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN 547
            +  K   +V+ +T  I   ++ G   EA  LY +M   +V PN  TY  ++  FC +  
Sbjct: 781 MVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGR 840

Query: 548 IKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           +   K +   ++      D  T   L     K       +    EM + GL+ D
Sbjct: 841 LGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGD 894



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 98/491 (19%), Positives = 185/491 (37%), Gaps = 74/491 (15%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCKLN 199
           +M +    P+ F    ++D   K G +D    L  ++L+ +  PN +++N  +  LC   
Sbjct: 231 DMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHG 290

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
            + + K    +M  KG +PNV  +  L+N FCK  R+ +  +L   M   G       + 
Sbjct: 291 RLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYN 350

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVT--------------------------- 292
            LI G+ ++ +L +A  ++  MV  G +P+++T                           
Sbjct: 351 TLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSG 410

Query: 293 --------YTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
                   Y  +I G  +A     A+     L  EG  PD   + ++I  L K G   +A
Sbjct: 411 EKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREA 470

Query: 345 LDVYDGLLELKLV---PDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNA---- 397
            +++  + E  ++    D +      +     G   + PK    +    DL  Y +    
Sbjct: 471 DELFRRMKEDGIICQAEDGHLGEHGTNNQVSLGTIIICPKRRRSIMESGDLYYYYSDTTL 530

Query: 398 ---------LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL--------------- 433
                    + S     GF    V+ +  +L++G  P++ SF G                
Sbjct: 531 WSSLVGLIPIASSSSVKGF----VRRHLLLLERGNNPESRSFSGASHHHHHHHHHHYRER 586

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           LR      K D+A  ++  ++ + P  +    T ++  + +  +    I LF +      
Sbjct: 587 LRSELHCIKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGI 646

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
             D+ S+T+ I       R   A  L  +M  +   P+  T   +L  FC+    +    
Sbjct: 647 SHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVS 706

Query: 554 LLQDVIDARIE 564
           L+  + +  +E
Sbjct: 707 LVDSMAELGLE 717



 Score = 41.6 bits (96), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 35/194 (18%), Positives = 77/194 (39%), Gaps = 4/194 (2%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           + GR    +     +A  GC     T+   +  + +       ++ F  M R G   +TF
Sbjct: 288 MHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTF 347

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
             N ++    ++G++ +   +          P+ ++  I L  LC   ++ +       M
Sbjct: 348 TYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDM 407

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
                Y  +  + I+++  CK  ++ EA++L   +   G       +T++I G  +    
Sbjct: 408 RSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPR 467

Query: 272 DMAGYLWEKMVQNG 285
             A  L+ +M ++G
Sbjct: 468 READELFRRMKEDG 481


>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 526

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/426 (25%), Positives = 208/426 (48%), Gaps = 12/426 (2%)

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCN 194
           +   L+ F  M      P+      +++V+ K+ + D+ I + K  Q+   +S ++  CN
Sbjct: 52  FNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMG-VSNDLYTCN 110

Query: 195 L-----CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
           L     C+ +        +G +++ GF P++  F  L+N FC   RI EA  ++  M+ +
Sbjct: 111 LLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEM 170

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           G    V  +T +ID   +   +D A  L+ +M   G  P+VV YTSL+ G   +  +  A
Sbjct: 171 GIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 230

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
              L  +      PD++  N LID   K G   DA ++Y+ ++++ + P+ +T+ SL++ 
Sbjct: 231 DLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLING 290

Query: 370 VCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
           +C+ GR     ++   +E +    D+V Y +L++ FCK      A+K++  M  KG T +
Sbjct: 291 LCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGN 350

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF- 485
             ++  L++G     K + A  V+  +V      N   +  ++  L   G+ +KA+ +F 
Sbjct: 351 TITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFE 410

Query: 486 --RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
             ++  ++  P ++ +Y V + GL   G+ E+A +++  M+   +     TY +++   C
Sbjct: 411 DMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMC 470

Query: 544 KERNIK 549
           K   +K
Sbjct: 471 KAGKVK 476



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/392 (24%), Positives = 189/392 (48%), Gaps = 8/392 (2%)

Query: 170 VDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
           +DL   +++   LP+ + F   L  + K+     V ++   +   G   ++    +L+NC
Sbjct: 56  LDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNC 115

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
           FC+  +   A   LG ++ LG    +  +T LI+GF    R++ A  +  +MV+ G  P+
Sbjct: 116 FCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPD 175

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
           VV YT++I    +      A S  + +E+ G  PD+V +  L++ L   G + DA  +  
Sbjct: 176 VVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLR 235

Query: 350 GLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAG 406
           G+++ K+ PD  TF +L+      G+     +L   +  + +  ++  Y +L++  C  G
Sbjct: 236 GMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEG 295

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
             ++A +++  M  KG  PD  ++  L+ G C  +K+++A+ ++  +       N   +T
Sbjct: 296 RLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYT 355

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKH- 525
            ++      G+ + A ++F   +    P ++ +Y V +  L   G+  +A +++  M+  
Sbjct: 356 TLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKR 415

Query: 526 --IAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
               VPPN  TY V+L   C   N K+ K L+
Sbjct: 416 EIDGVPPNIRTYNVLLHGLC--YNGKLEKALM 445



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/362 (25%), Positives = 173/362 (47%), Gaps = 3/362 (0%)

Query: 206 DVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF 265
           D+   MV     P++  F  LLN   KM +      L   +  +G S  +    +L++ F
Sbjct: 57  DLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCF 116

Query: 266 RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL 325
            +  +  +A     K+++ G  P++ T+TSLI GF        A S ++ +   G  PD+
Sbjct: 117 CQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDV 176

Query: 326 VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCG 385
           V +  +ID L K G  D+AL +++ +    + PD   + SL++ +C SGR+     L+ G
Sbjct: 177 VIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRG 236

Query: 386 L---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
           +   +++ D++ +NAL+  F K G    A +LYN M+     P+ +++  L+ GLC   +
Sbjct: 237 MMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGR 296

Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTV 502
           +DEA  ++  +       +   +T++++   +  +   A+++F     +    + ++YT 
Sbjct: 297 LDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTT 356

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
            I+G    G+   A  ++  M    VPPN  TY V+L   C    +     + +D+    
Sbjct: 357 LIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKRE 416

Query: 563 IE 564
           I+
Sbjct: 417 ID 418



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 117/480 (24%), Positives = 218/480 (45%), Gaps = 26/480 (5%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
           AL  F    + R     +  F  +++V+ ++  +F+ V  +   L  +G      T  L 
Sbjct: 55  ALDLFSHMVESRP-LPSIIDFTRLLNVIAKMK-KFDVVINLCKHLQIMGVSNDLYTCNLL 112

Query: 126 LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA----------RNIVMDVLFKIGR-VDLGI 174
           +  + +     +      ++ + GF P+ F            N + + +  + + V++GI
Sbjct: 113 MNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGI 172

Query: 175 KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
           K       P+ + +   + +LCK   V N   +   M   G  P+V M+  L+N  C  G
Sbjct: 173 K-------PDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSG 225

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
           R  +A  LL  M+       V  +  LID F +  +L  A  L+ +M+Q   +PN+ TYT
Sbjct: 226 RWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYT 285

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
           SLI G         A     ++E++G  PD+V +  LI+   K    +DA+ ++  + + 
Sbjct: 286 SLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQK 345

Query: 355 KLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQA 411
            L  ++ T+ +L+    L G+ ++  ++   +    V  ++  YN LL   C  G  N+A
Sbjct: 346 GLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKA 405

Query: 412 VKLYNTMLDK---GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAI 468
           + ++  M  +   G  P+  ++  LL GLC   K+++A+ V+  +   +  +    +T I
Sbjct: 406 LMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTII 465

Query: 469 VDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAV 528
           +  + +AG+   A+ LF     +    +VV+YT  I GL   G   EA++L+ +MK   V
Sbjct: 466 IQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGV 525



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/309 (25%), Positives = 150/309 (48%), Gaps = 10/309 (3%)

Query: 249 LGTSLSVNAW----TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
           LG S  V A+     +L +G   L+  + A  L+  MV++   P+++ +T L+    + K
Sbjct: 27  LGLSFWVRAFCNYREILRNGLHSLQ-FNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMK 85

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
            F +  +    L+  G + DL   N+L++C  +      A      L++L   PD +TF 
Sbjct: 86  KFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFT 145

Query: 365 SLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
           SL++  CL  R     S++ ++V  + ++ D+V+Y  ++   CK G  + A+ L+N M +
Sbjct: 146 SLINGFCLGNRIEEAMSMVNQMV-EMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMEN 204

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
            G  PD   +  L+ GLC + +  +A  + +G++      +     A++D  ++ G+   
Sbjct: 205 YGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLD 264

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
           A +L+   I      ++ +YT  I GL   GR +EA  ++  M+     P+   Y  ++ 
Sbjct: 265 AKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLIN 324

Query: 541 SFCKERNIK 549
            FCK + ++
Sbjct: 325 GFCKCKKVE 333



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 112/265 (42%), Gaps = 38/265 (14%)

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYN 396
            +++ALD++  ++E + +P    F  LL+ +    +F ++  L   L+   V  DL   N
Sbjct: 51  QFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCN 110

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            L++ FC++  P  A      ++  GF PD ++F  L+ G C   +I+EA+         
Sbjct: 111 LLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAM--------- 161

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
                     ++V++++E G                   DVV YT  I  L + G  + A
Sbjct: 162 ----------SMVNQMVEMG----------------IKPDVVIYTTIIDSLCKNGHVDNA 195

Query: 517 YILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKF 576
             L++QM++  + P+   Y  ++   C     +    LL+ ++  +I+ D  T   L   
Sbjct: 196 LSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDA 255

Query: 577 IFKFHSSSSAVNQLVEMCNLGLIPD 601
             K      A     EM  + + P+
Sbjct: 256 FVKEGKLLDAKELYNEMIQMSIAPN 280



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/215 (21%), Positives = 92/215 (42%), Gaps = 8/215 (3%)

Query: 80  FHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVL 139
           F DV ++  +I+   +   + E    I  E+++ G      T+   ++ +       +  
Sbjct: 313 FPDVVAYTSLINGFCKCK-KVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQ 371

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-------PNFLSFNIAL 192
           E F  M   G  PN    N+++  L   G+V+  + + ++ Q        PN  ++N+ L
Sbjct: 372 EVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLL 431

Query: 193 CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
             LC    +     V G M ++     +  + I++   CK G++ +A  L   + + G  
Sbjct: 432 HGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVK 491

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCS 287
            +V  +T +I G  R   +  A  L+ KM ++G S
Sbjct: 492 PNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGVS 526


>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
 gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
          Length = 831

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/438 (22%), Positives = 202/438 (46%), Gaps = 40/438 (9%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNL 195
           EA  E+      P++   + V+  L K GRVD  + +L    K    P+  + ++ +  L
Sbjct: 360 EACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINEL 419

Query: 196 CKLNDVSNVKDVIGMMVRK--GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
           CK + +   ++ +  M RK      +   +  LLN  CK  ++ +A+ +   M++  + +
Sbjct: 420 CKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFV 479

Query: 254 -SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
             V ++++LIDGF ++  L  A  L+++M+   C PNV TY + + G M     + A   
Sbjct: 480 PDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGV 539

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
            + + + G +PD++ ++ LI   S    +D A ++++ ++     P++            
Sbjct: 540 YEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNA------------ 587

Query: 373 SGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
                               V YN LL   CK   P++A +L+  M+++G  PD  ++  
Sbjct: 588 --------------------VTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTT 627

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           LL G C   KI++A+ V+  +V      +   +  ++     AG+  +A QLF+  +  +
Sbjct: 628 LLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQ 687

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI-AVPPNAYTYRVMLLSFCKERNIKMV 551
              D VS+ + I GL +  R ++A  ++ +M+      P+  TY  ++   C E+ +   
Sbjct: 688 CKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEA 747

Query: 552 KRLLQDVIDARIELDYHT 569
            ++ +++   ++  D H 
Sbjct: 748 MKVFKEIDRLKLSPDPHA 765



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 145/301 (48%), Gaps = 8/301 (2%)

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
           +P+ +S++I +   CK++++   + +   M+     PNV  +   LN   + GRIA+A  
Sbjct: 479 VPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQG 538

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           +   M+  G S  V  ++ LI GF   R+ D A  L+E M+  GC PN VTY  L+ G  
Sbjct: 539 VYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLC 598

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           +      A      +   G  PD V +  L+     +G  + A++V+D ++     PD  
Sbjct: 599 KESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVV 658

Query: 362 TFCSLLSTVCLSGR---FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
            +  LL     +G+      L +++   + + D V +N ++    KA   + AV+++  M
Sbjct: 659 AYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERM 718

Query: 419 -LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
             D G +PD  ++  L+ GLCG +++ EA+ V++ I     + + H        L+EA +
Sbjct: 719 EQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNV----LLEAIK 774

Query: 478 C 478
           C
Sbjct: 775 C 775



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 116/544 (21%), Positives = 221/544 (40%), Gaps = 57/544 (10%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
           AL+FF W  + R++ HDV +++ ++  + R     +    +  ++   G V    T+ + 
Sbjct: 113 ALTFFRW-LQARNFKHDVFTYNCLLDKLIRHRD-LKQAGQVFEKMVAQGVVPNGFTYAVL 170

Query: 126 LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV---------DLGIKV 176
           ++           +  F EM   GF P++     V + L   G+          DL  +V
Sbjct: 171 VQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRV 230

Query: 177 LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
             E  L   L     L N    +       +   MV+ G  P+  ++  ++   CK+  +
Sbjct: 231 AVEMMLKKAL-----LVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENL 285

Query: 237 AEAYQL-LGLMITLGTSLSVNAWTVLIDG----------FRRLR---------------- 269
            EA++L L + +     L+  AWT  + G          F   R                
Sbjct: 286 DEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDML 345

Query: 270 --------RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH 321
                   R+D A     ++      P+  T  S+I+   +A     A S L+ +   G+
Sbjct: 346 IRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGY 405

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLE--LKLVPDSYTFCSLLSTVCLSGR---- 375
            PD+  H++LI+ L K     +A +   G+           +++ SLL+++C + +    
Sbjct: 406 CPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQA 465

Query: 376 FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
           F++   +V       D+V Y+ L+  FCK     +A KLY  M+D    P+  ++   L 
Sbjct: 466 FAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLN 525

Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
           GL    +I +A  VY+ +V    + +   ++ ++     A +  +A +LF   I      
Sbjct: 526 GLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRP 585

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
           + V+Y   + GL +  + +EA+ L+ +M      P+  TY  +L  FC    I+    + 
Sbjct: 586 NAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVF 645

Query: 556 QDVI 559
            +++
Sbjct: 646 DEMV 649



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 97/442 (21%), Positives = 190/442 (42%), Gaps = 12/442 (2%)

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIA 191
           G  L  F  +    F  + F  N ++D L +   +    +V +    +  +PN  ++ + 
Sbjct: 111 GEALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVL 170

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           + + C   +        G MV KGF P+  +++ +  C    G+  E  ++ G  +    
Sbjct: 171 VQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRV 230

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
           ++ +     L+  F    +   A  L+  MV++GC P+   Y+ ++    + +    AF 
Sbjct: 231 AVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFK 290

Query: 312 FLDMLESEGHAP-DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
               +  E  AP + V     +  L K G  + A +    + E  L      +  L+  +
Sbjct: 291 LFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQE-SLSSSQPVYDMLIRLL 349

Query: 371 CLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
             SGR     +    + G  ++      ++++   CKAG  + A+ L  TM+ +G+ PD 
Sbjct: 350 IESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDM 409

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGI--VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
            +   L+  LC A KI EA    QG+   +++ + +   + ++++ L +A + H+A  +F
Sbjct: 410 ATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIF 469

Query: 486 RRAIVEK-YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
              + E+ +  DVVSY++ I G  +      A  LY QM  +   PN  TY   L    +
Sbjct: 470 STMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMR 529

Query: 545 ERNIKMVKRLLQDVIDARIELD 566
           +  I   + + ++++ A    D
Sbjct: 530 KGRIADAQGVYEEMVAAGCSPD 551



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 121/259 (46%), Gaps = 6/259 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           +V +++  ++ + R  GR    +G+  E+   GC     T+   +  +     +    E 
Sbjct: 516 NVTTYNAFLNGLMR-KGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHEL 574

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCK 197
           F+ M   G  PN    N ++  L K  + D    L  K+++    P+ +++   L   C 
Sbjct: 575 FETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCN 634

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
           +  +    +V   MV KG  P+V  +  LL  F + G+  EA QL  +M++        +
Sbjct: 635 VGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVS 694

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQN-GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
             ++IDG  + +RLD A  ++E+M Q+ GCSP++VTY SLI G    +  S A      +
Sbjct: 695 HNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEI 754

Query: 317 ESEGHAPDLVFHNVLIDCL 335
           +    +PD    NVL++ +
Sbjct: 755 DRLKLSPDPHAFNVLLEAI 773



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/205 (20%), Positives = 94/205 (45%), Gaps = 5/205 (2%)

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           D+  YN LL    +     QA +++  M+ +G  P+ +++  L++  C  R  DEA+  +
Sbjct: 128 DVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFF 187

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
             +V      ++ ++  + + L   G+  +  ++F R + ++  ++++     +   +  
Sbjct: 188 GEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQ 247

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI-KMVKRLLQDVIDARIELDYHT 569
            +  EA  L+  M      P+A  Y  M+L+ CK  N+ +  K  L+  ++++  L+   
Sbjct: 248 DKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLN--- 304

Query: 570 SIRLTKFIFKFHSSSSAVNQLVEMC 594
           ++  T F+      S  + Q  E C
Sbjct: 305 NVAWTAFLSGL-CKSGKIEQAFEAC 328



 Score = 42.0 bits (97), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 3/94 (3%)

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
           A++  L + G   +A+  FR      +  DV +Y   +  L+     ++A  ++ +M   
Sbjct: 102 AVIKHLRDGG---EALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQ 158

Query: 527 AVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
            V PN +TY V++ S C ERN     R   +++D
Sbjct: 159 GVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVD 192


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/410 (24%), Positives = 185/410 (45%), Gaps = 8/410 (1%)

Query: 147 RFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE----TQLPNFLSFNIALCNLCKLNDVS 202
           RFGF  +    N ++DV  +  R      +LK     T LP+  ++N+ +   C   +  
Sbjct: 52  RFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPE 111

Query: 203 NVKDVIGMMVRK-GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVL 261
               VI  M    G  P+++   ++L+  CK G++  A        T G ++ ++ +T +
Sbjct: 112 EAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAI 171

Query: 262 IDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH 321
           +D   + +++  A  L EK+  NGC+P + TY +L+ G  +      A   L  +   G 
Sbjct: 172 VDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGC 231

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF---SL 378
            PD+V +  LID L K     +A  ++  +    LV D+  + +L+  +  +G+    S 
Sbjct: 232 TPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASS 291

Query: 379 LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
           + K +       D+V  + ++   CKAG    AV+++ +M  +G  P+   +  L+ GLC
Sbjct: 292 VYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLC 351

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
            ARK+D A+ +   +       +   +  ++D L ++G    A   F   +      DV 
Sbjct: 352 KARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVY 411

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
           +Y + + G  + G T+ A  ++  M      PN  TY  ++   CK R +
Sbjct: 412 TYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQL 461



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 108/433 (24%), Positives = 201/433 (46%), Gaps = 22/433 (5%)

Query: 136 GMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSF 188
           G VL A   F+     G T +      ++D L K  ++   + ++++       P   ++
Sbjct: 144 GKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATY 203

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           N  L  LCK+  +    D++  +V  G  P+V  +  L++   K  R  EAY+L   M  
Sbjct: 204 NALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMAL 263

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
            G  L    +T LI G  +  ++  A  +++ M   GC P+VVT +++I G  +A     
Sbjct: 264 RGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGA 323

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A      +E+ G AP+ V ++ LI  L K    D AL++   + +    PD+ T+  L+ 
Sbjct: 324 AVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILID 383

Query: 369 TVCLSGR-------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
            +C SG        F  + +  C    + D+  YN L+S FCKAG  + A  +++ M   
Sbjct: 384 GLCKSGDVEAARAFFDEMLEAGC----KPDVYTYNILVSGFCKAGNTDAACGVFDDMSSS 439

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
             +P+  ++  L+ GLC  R++ +A   +Q +       ++ V++++VD L ++G+    
Sbjct: 440 HCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGG 499

Query: 482 IQLFRRAIVEKYPL-DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
             LF    +E+  + +  + T  I  L +  R +EA  L++ ++   + P+ Y Y  ++ 
Sbjct: 500 CMLFDE--MERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIIS 556

Query: 541 SFCKERNIKMVKR 553
           +  K   +    R
Sbjct: 557 TLIKSAKVNPCTR 569



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 99/417 (23%), Positives = 184/417 (44%), Gaps = 9/417 (2%)

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
           R GF  +V     LL+ F +  R  EA  LL   +       V  W VLI G+   R  +
Sbjct: 52  RFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPE 111

Query: 273 MAGYLWEKMVQN-GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
            A  +  +M ++ G +P++ T+  ++ G  ++     A    +   + G   D+  +  +
Sbjct: 112 EAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAI 171

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLVCGLE 387
           +D L+K     DA+ + + +      P   T+ +LL+ +C  GR      LL K+V    
Sbjct: 172 VDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIV-DNG 230

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
              D+V Y +L+    K     +A KL+  M  +G   D   +  L+RGL  A KI +A 
Sbjct: 231 CTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQAS 290

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
           +VY+ +       +    + ++D L +AGR   A+++F+         + V Y+  I GL
Sbjct: 291 SVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGL 350

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
            +  + + A  + +QMK     P+  TY +++   CK  +++  +    ++++A  + D 
Sbjct: 351 CKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDV 410

Query: 568 HTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKL---GLLSDETMTPVSLF 621
           +T   L     K  ++ +A     +M +    P+ +       GL     +T  SL+
Sbjct: 411 YTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLY 467



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/287 (23%), Positives = 125/287 (43%), Gaps = 16/287 (5%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G+      +   +   GCV    T    +    +    G  +  F  M   G  PN    
Sbjct: 284 GKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVY 343

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           + ++  L K  ++D  +++L + +     P+ +++NI +  LCK  DV   +     M+ 
Sbjct: 344 SALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLE 403

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G  P+V  + IL++ FCK G    A  +   M +   S +V  +  LI G  + R+L  
Sbjct: 404 AGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTK 463

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD-----LVFH 328
           A   ++ M + GC P+   Y+SL+ G  ++          D +E  G A       L+FH
Sbjct: 464 ASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFH 523

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
                 L K    D+A+ +++ + + + +P  Y + S++ST+  S +
Sbjct: 524 ------LCKANRVDEAVSLFNAIRK-EGMPHPYAYNSIISTLIKSAK 563


>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 822

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/454 (23%), Positives = 204/454 (44%), Gaps = 43/454 (9%)

Query: 133 EMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSF 188
           E+Y  +LE   + G      + ++  IV+  L  +G+V+ G K++ +      +PN + +
Sbjct: 185 ELYDKMLERGGDHG-LDLVVDNYSIVIVVKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFY 243

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           N+ +   CK  D+     V   +  KGF P +  +  L++ FCK G+     QLL  M  
Sbjct: 244 NVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNV 303

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVT---------------- 292
           +G +++V  +  +ID   +   +D A  +   M + GC P++ T                
Sbjct: 304 MGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKE 363

Query: 293 -------------------YTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
                              YT L+  + +   + +A   L  +   G  PDLV +   I 
Sbjct: 364 AEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIH 423

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF---SLLPKLVCGLEVEA 390
                G  D AL V + ++E  + PD+  +  L+S +C  GRF    LL   +  L ++ 
Sbjct: 424 GSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQP 483

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           D  +Y  L+  F +    ++A +L+  ++ KG  P    +  +++GLC   K+ +A++  
Sbjct: 484 DAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYV 543

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
             + + N A + + H+ ++D  ++      A+++F + + +KY  +VV+YT  I G  + 
Sbjct: 544 NKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKI 603

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
                A  ++  M+   + PN  TY +++  F K
Sbjct: 604 ADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSK 637



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 116/533 (21%), Positives = 217/533 (40%), Gaps = 66/533 (12%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
            G+F+ V  ++ E+  +G  +  + F   +   ++  +     E    M   G  P+   
Sbjct: 288 AGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITT 347

Query: 157 RNIVMDVLFKIGRVDLGIKVLKE----TQLPNFLSFNIALCNLCKLNDVSNVKDV----- 207
            NI+++     GR+    + L+     T LPN  S+   +   CK  D     D+     
Sbjct: 348 YNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIA 407

Query: 208 -------------------------IGMMVR-----KGFYPNVRMFEILLNCFCKMGRIA 237
                                    + +MVR     KG +P+ +++ +L++  CK GR  
Sbjct: 408 ETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFP 467

Query: 238 EAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLI 297
            A  LL  M+ L        +  L+DGF R   LD A  L+E ++  G  P VV Y  +I
Sbjct: 468 AAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMI 527

Query: 298 KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
           KG  +    + A S+++ ++   HAPD   H+ +ID   K    D AL ++  +++ K  
Sbjct: 528 KGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYK 587

Query: 358 PDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKL 414
           P+   + SL++  C     S   K+   ++   +E ++V Y  L+  F K G P +A   
Sbjct: 588 PNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASF 647

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
           +  ML     P++ +F  L+ GL                       N    T ++++  E
Sbjct: 648 FELMLMNNCLPNDTTFHYLINGL----------------------TNITNTTLLIEKNEE 685

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
             R    +  F   I E +   + +Y   I  L + G  + A +L ++M       ++  
Sbjct: 686 NDRSL-ILDFFATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMDSVC 744

Query: 535 YRVMLLSFCKERNIKMVKRLLQ-DVIDARIELDYHTSIRLTKFIFKFHSSSSA 586
           +  +L   C+    K  + ++  D+     +  +  S++L K+++    S ++
Sbjct: 745 FSALLHGLCQTGKSKEWRNIISGDLTKIDFQTAFEYSLKLDKYLYDGKPSEAS 797



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 105/470 (22%), Positives = 202/470 (42%), Gaps = 27/470 (5%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLK-----------ETQLPNFLSFNIALCNLCKLND 200
           P   A N +++ L K G+VD+  ++             +  + N+ S  I +  LC +  
Sbjct: 162 PCVVANNSLLNCLVKNGKVDVACELYDKMLERGGDHGLDLVVDNY-SIVIVVKGLCDVGK 220

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG------RIAEAYQLLGLMITLGTSLS 254
           V   + +I      G  PNV  + ++++ +CK G      R+ E  +L G + TL T   
Sbjct: 221 VEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLET--- 277

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
              +  LIDGF +  +  +   L  +M   G + NV  + S+I    +  +   A   + 
Sbjct: 278 ---YGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMR 334

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
           M+   G  PD+  +N+LI+     G   +A +  +   E  L+P+ +++  L+   C  G
Sbjct: 335 MMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQG 394

Query: 375 RFSLLPKLVCGLEV---EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
            + +   ++  +     + DLV Y A +      G  + A+ +   M++KG  PD   + 
Sbjct: 395 DYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYN 454

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            L+ GLC   +   A  +   ++  N   +A+++  +VD  I      KA +LF   + +
Sbjct: 455 VLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSK 514

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
                VV Y V I+GL + G+  +A    ++MK     P+ YT+  ++  + K+ ++   
Sbjct: 515 GIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSA 574

Query: 552 KRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            ++   ++  + + +      L     K    S A      M +  L P+
Sbjct: 575 LKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPN 624



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/326 (24%), Positives = 141/326 (43%), Gaps = 51/326 (15%)

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL------------ 325
           W   +      N V Y+SL+K  ++ ++FS     L+ +++    P L            
Sbjct: 81  WASTLPFSSPLNNVAYSSLLKLMVKYRLFSEIEIVLEDMKNRNFKPTLEALNSVICVYAE 140

Query: 326 ------------------------VFHNVLIDCLSKMGSYDDALDVYDGLLE------LK 355
                                   V +N L++CL K G  D A ++YD +LE      L 
Sbjct: 141 YGFVDKAVKMFYMVCELYNCFPCVVANNSLLNCLVKNGKVDVACELYDKMLERGGDHGLD 200

Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKLV---CGLEVEADLVVYNALLSYFCKAGFPNQAV 412
           LV D+Y+   ++  +C  G+     KL+    G     ++V YN ++  +CK G   +A 
Sbjct: 201 LVVDNYSIVIVVKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRAT 260

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARK---IDEAINVYQGIVMNNPAVNAHVHTAIV 469
           +++  +  KGF P   ++  L+ G C A K   +D+ +N    + +N   VN  V  +I+
Sbjct: 261 RVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLN---VNVKVFNSII 317

Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
           D   + G   KA ++ R         D+ +Y + I     GGR +EA     + K   + 
Sbjct: 318 DAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLL 377

Query: 530 PNAYTYRVMLLSFCKERNIKMVKRLL 555
           PN ++Y  ++ ++CK+ +  M   +L
Sbjct: 378 PNKFSYTPLMHAYCKQGDYVMASDML 403


>gi|302757477|ref|XP_002962162.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
 gi|300170821|gb|EFJ37422.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
          Length = 484

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/447 (24%), Positives = 196/447 (43%), Gaps = 10/447 (2%)

Query: 48  LAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIV 107
           L P +V S +   PS  +A  FF W +KQ  Y HDV  +  ++  + R     E VR   
Sbjct: 9   LEPRLVGSVIRRVPSLALARKFFDWSSKQEGYRHDVYCYTRLLHHLVRARRTREAVRFFK 68

Query: 108 GELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDV---L 164
            EL    C     +F + ++ +      G        M   G  P+  A N+V+     L
Sbjct: 69  RELC-AHCRPSLYSFTIIIQCFCNVRNPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDL 127

Query: 165 FKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFE 224
            ++GR  +    + +T  PN  ++N  +  LCK   +     +   +      P+   + 
Sbjct: 128 GRVGRALIKFGKMGKTCKPNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYS 187

Query: 225 ILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN 284
            L++  C+  R+  A ++  +M+         A+  + DGF + RR+D A  + + M+Q 
Sbjct: 188 TLVHGLCQAERLEAAIKVYDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQR 247

Query: 285 GCSPNVVTYTSLIKGFMEAK-MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
           GC P+VVTY  +I G  + K     A+     +      P+ V +  +I  LSK+     
Sbjct: 248 GCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQR 307

Query: 344 ALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLS 400
            L+++ G+ +  L PD Y + SL+       +      ++       V  D+ +Y  L+S
Sbjct: 308 CLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLIS 367

Query: 401 YFCKAGFP--NQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
            +C+A  P  ++A+ L+  M D+   P+  ++  +LRGLC   + DEA  ++Q +     
Sbjct: 368 GYCRARKPRVDEALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKC 427

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           + N      +   +I  G+  K  ++F
Sbjct: 428 SPNRMTFKVMTMGMIHCGKTDKFERIF 454



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 88/384 (22%), Positives = 179/384 (46%), Gaps = 9/384 (2%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+  SF I +   C + +       +G M   G  P+V  + ++L  +C +GR+  A   
Sbjct: 77  PSLYSFTIIIQCFCNVRNPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIK 136

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
            G M       +V  +  +I+G  +  ++D A +L+ ++  +   P+  TY++L+ G  +
Sbjct: 137 FGKMGKT-CKPNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQ 195

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
           A+    A    DM+    +  D   +N + D   K    D+AL+V   +++    P   T
Sbjct: 196 AERLEAAIKVYDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRGCKPSVVT 255

Query: 363 FCSLLSTVC-----LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
           +  +++ VC     +   + L  ++V G +   + V Y  ++    K     + ++L+  
Sbjct: 256 YNCIINGVCQYKNRIEEAYRLFQQMV-GSDCPPNAVTYGTMILGLSKIYEVQRCLELFKG 314

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA-- 475
           M   G +PD Y++  L+      RK+DEA ++ Q    N+   + +++T ++     A  
Sbjct: 315 MSKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARK 374

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
            R  +A+ LF+     +   +V++Y + +RGL + GR +EAY ++ +M  +   PN  T+
Sbjct: 375 PRVDEALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTF 434

Query: 536 RVMLLSFCKERNIKMVKRLLQDVI 559
           +VM +           +R+  D++
Sbjct: 435 KVMTMGMIHCGKTDKFERIFMDMV 458



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 79/326 (24%), Positives = 140/326 (42%), Gaps = 37/326 (11%)

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           G    V  +T L+    R RR   A   +++ +   C P++ ++T +I+ F   +    A
Sbjct: 39  GYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNPGRA 98

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
           + +L  + S G  PD+  +NV++     +G    AL  +  +                  
Sbjct: 99  WRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKM------------------ 140

Query: 370 VCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
                          G   + ++  YN +++  CK G  + AV L+  +      PD ++
Sbjct: 141 ---------------GKTCKPNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFT 185

Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
           +  L+ GLC A +++ AI VY  ++  N   +A  + A+ D   +  R  +A+++ +  I
Sbjct: 186 YSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMI 245

Query: 490 VEKYPLDVVSYTVAIRGLLE-GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
                  VV+Y   I G+ +   R EEAY L+ QM     PPNA TY  M+L   K   +
Sbjct: 246 QRGCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEV 305

Query: 549 KMVKRLLQDVIDARIELD---YHTSI 571
           +    L + +  A +  D   YH+ I
Sbjct: 306 QRCLELFKGMSKAGLSPDGYAYHSLI 331



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/216 (20%), Positives = 87/216 (40%), Gaps = 6/216 (2%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
           QR     V +++ +I+ V +   R E    +  ++    C   A T+   +    +    
Sbjct: 246 QRGCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEV 305

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIA 191
              LE F  M + G +P+ +A + ++    K+ ++D    +L++       P+   +   
Sbjct: 306 QRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTL 365

Query: 192 LCNLCKLND--VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
           +   C+     V     +   M  +  +PNV  + I+L   CK GR  EAYQ+   M  +
Sbjct: 366 ISGYCRARKPRVDEALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKV 425

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
             S +   + V+  G     + D    ++  MV  G
Sbjct: 426 KCSPNRMTFKVMTMGMIHCGKTDKFERIFMDMVYKG 461


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 125/495 (25%), Positives = 226/495 (45%), Gaps = 48/495 (9%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKET-----QLPNFLSFNIALCNLCKLNDVSNVKD 206
           P+    + V++   K G +D   ++L+E        P+ +++   +  LC+   +    +
Sbjct: 43  PDLVTYSTVINGFCKQGEMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACE 102

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
           ++  M  KG  P+   F  L+  +C   ++ EA +L   ++T    L   + + LI G  
Sbjct: 103 MVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLC 162

Query: 267 RLRRLDMAGYLWEKMV--QNGC-SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP 323
           R RR+  A  L+++M   ++G   P+VVTYT+LI GF ++     A   L ++E     P
Sbjct: 163 RERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVP 222

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLP 380
           ++V ++ L+  L K G  D ALD++  +     VP+  T+ +L+  +C + +     LL 
Sbjct: 223 NVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLM 282

Query: 381 KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
             +      AD V YNALL  +C+ G   +A +L+  M  K   PD  ++  L+RG C A
Sbjct: 283 DEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNA 342

Query: 441 RKIDEA------INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            +++EA      +    GI   +P V    ++ +V     A R  +A +  +  I     
Sbjct: 343 SRLEEARFLLENMKTAAGI---DPDV--VTYSIVVAGYSRAKRFVEAAEFIQEMIARNVA 397

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
            + V+Y+  I GL + GR   A  +   +      P+  TY +++   C     +    L
Sbjct: 398 PNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK----PDVVTYTIVIEGLCGTDRTEEALTL 453

Query: 555 LQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDET 614
           L+++++ R+E    T          F+S   A      +C LG + DE W+ L  ++   
Sbjct: 454 LEEMVNKRVEPSVGT----------FNSVIGA------LCRLGDM-DEAWKLLVAMAAHG 496

Query: 615 MTP-----VSLFDGF 624
           + P      +L +GF
Sbjct: 497 LEPGMVTYTTLLEGF 511



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 117/476 (24%), Positives = 212/476 (44%), Gaps = 87/476 (18%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKETQ-----LPNFLSFNIALCNLCKLNDVSNVKD 206
           PN    N+V++ L K        +VLKE +      P+ ++++  +   CK  ++    +
Sbjct: 7   PNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACE 66

Query: 207 VIGMMV-RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF 265
           ++  MV R G  P+V  +  +++  C+ G++  A +++  M   G       ++ LI G+
Sbjct: 67  ILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGW 126

Query: 266 RRLRRLDMAGYLWEKMVQNGC--------------------------------------S 287
              R++D A  L+++++ + C                                       
Sbjct: 127 CNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWK 186

Query: 288 PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
           P+VVTYT+LI GF ++     A   L ++E     P++V ++ L+  L K G  D ALD+
Sbjct: 187 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 246

Query: 348 YDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCK 404
           +  +     VP+  T+ +L+  +C + +     LL   +      AD V YNALL  +C+
Sbjct: 247 FRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCR 306

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID-------------------- 444
            G   +A +L+  M  K   PD  ++  L+RG C A +++                    
Sbjct: 307 LGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVV 366

Query: 445 ----------------EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
                           EA    Q ++  N A NA  +++++D L +AGR + A+++ +  
Sbjct: 367 TYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKN- 425

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
            V+K   DVV+YT+ I GL    RTEEA  L  +M +  V P+  T+  ++ + C+
Sbjct: 426 -VDKP--DVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCR 478



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 103/393 (26%), Positives = 186/393 (47%), Gaps = 11/393 (2%)

Query: 177 LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR-KGFYPNVRMFEILLNCFCKMGR 235
           ++E   PN  ++N+ +  LCK    S   +V+  M   K   P++  +  ++N FCK G 
Sbjct: 1   MREFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGE 60

Query: 236 IAEAYQLLGLMITL-GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
           +  A ++L  M+T  G +  V  +T ++DG  R  ++D A  +  +M   G  P+  T++
Sbjct: 61  MDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFS 120

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
           +LI G+  A+    A      + +     D V  + LI  L +     +A +++   +E+
Sbjct: 121 ALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQE-MEM 179

Query: 355 K----LVPDSYTFCSLLSTVCLSGRFSLLPKLVC---GLEVEADLVVYNALLSYFCKAGF 407
           +      PD  T+ +L+   C SG      K++    G +   ++V Y++LL   CKAG 
Sbjct: 180 REDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGD 239

Query: 408 PNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTA 467
            +QA+ L+  M  KG  P+  ++  L+ GLC A K+D A  +   +       +   + A
Sbjct: 240 LDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNA 299

Query: 468 IVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIA 527
           ++D     GR  +A QLF+    +    D ++YT  +RG     R EEA  L   MK  A
Sbjct: 300 LLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAA 359

Query: 528 -VPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
            + P+  TY +++  + + +        +Q++I
Sbjct: 360 GIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMI 392



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 110/437 (25%), Positives = 199/437 (45%), Gaps = 27/437 (6%)

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN--AWTVLIDGFRRLR 269
           +R+   PN R + +++N  CK    ++AY++L  M   G S++ +   ++ +I+GF +  
Sbjct: 1   MREFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRD-GKSVAPDLVTYSTVINGFCKQG 59

Query: 270 RLDMAGYLWEKMV-QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH 328
            +D A  +  +MV ++G +P+VVTYTS++ G         A   +  ++ +G  PD    
Sbjct: 60  EMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTF 119

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV 388
           + LI         D+AL +Y  +L      D+ +  +L++ +C   R     +L   +E+
Sbjct: 120 SALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEM 179

Query: 389 ------EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
                 + D+V Y AL+  FCK+G   +A+K+   M  +   P+  ++  LL GLC A  
Sbjct: 180 REDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGD 239

Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTV 502
           +D+A+++++ +       N   +T ++  L  A +   A  L         P D VSY  
Sbjct: 240 LDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNA 299

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV-IDA 561
            + G    GR EEA  L+ +M   +  P+  TY  ++  FC    ++  + LL+++   A
Sbjct: 300 LLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAA 359

Query: 562 RIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTPVSLF 621
            I+ D  T   +     +      A   + EM    + P+             +T  SL 
Sbjct: 360 GIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPN------------AVTYSSLI 407

Query: 622 DGFVPCERRAGNANHLL 638
           DG      +AG  NH +
Sbjct: 408 DGLC----KAGRVNHAM 420



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 98/437 (22%), Positives = 197/437 (45%), Gaps = 16/437 (3%)

Query: 109 ELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMG---RFGFTPNTFARNIVMDVLF 165
           E+    C + A +    +    R    G   E F EM       + P+      ++D   
Sbjct: 141 EILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFC 200

Query: 166 KIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
           K G ++  +K+L   +    +PN ++++  L  LCK  D+    D+   M  KG  PNV 
Sbjct: 201 KSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVV 260

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            +  L++  C   ++  A  L+  M          ++  L+DG+ RL R++ A  L+++M
Sbjct: 261 TYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEM 320

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIA-FSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
               C P+ +TYT L++GF  A     A F   +M  + G  PD+V +++++   S+   
Sbjct: 321 AAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKR 380

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLS 400
           + +A +    ++   + P++ T+ SL+  +C +GR +   +++  ++ + D+V Y  ++ 
Sbjct: 381 FVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVD-KPDVVTYTIVIE 439

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
             C      +A+ L   M++K   P   +F  ++  LC    +DEA  +   +  +    
Sbjct: 440 GLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEP 499

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLF----RRAIVEKYPLDVV---SYTVAIRGLLEGGRT 513
               +T +++     GR   A +LF    R+A       ++V   +++  IRGL +    
Sbjct: 500 GMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREI 559

Query: 514 EEAYILYSQMKHIAVPP 530
           ++A  +  +++     P
Sbjct: 560 DKAMAVVEELRSRECEP 576



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 109/420 (25%), Positives = 185/420 (44%), Gaps = 22/420 (5%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV ++  +I    + +G  E    ++G +    CV    T+   L    +       L+ 
Sbjct: 188 DVVTYTALIDGFCK-SGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 246

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE---TQLP-NFLSFNIALCNLCK 197
           F  M   G  PN      ++  L    +VD    ++ E   T  P + +S+N  L   C+
Sbjct: 247 FRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCR 306

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT-LGTSLSVN 256
           L  +   K +   M  K   P+   +  L+  FC   R+ EA  LL  M T  G    V 
Sbjct: 307 LGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVV 366

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
            +++++ G+ R +R   A    ++M+    +PN VTY+SLI G  +A   + A   L  +
Sbjct: 367 TYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNV 426

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
           +     PD+V + ++I+ L      ++AL + + ++  ++ P   TF S++  +C  G  
Sbjct: 427 DK----PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDM 482

Query: 377 SLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG--------FTP 425
               KL+  +    +E  +V Y  LL  F + G    A +L+  M  K           P
Sbjct: 483 DEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVP 542

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           +  +F  L+RGLC AR+ID+A+ V + +             AIVD L+ AGR  +A +L 
Sbjct: 543 EQ-AFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLI 601


>gi|242061532|ref|XP_002452055.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
 gi|241931886|gb|EES05031.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
          Length = 810

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 114/512 (22%), Positives = 237/512 (46%), Gaps = 16/512 (3%)

Query: 52  IVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELA 111
           IV++ +++C ++L  +   +    Q     D+ S++ ++  + R  GR+E    ++  + 
Sbjct: 274 IVYNEIISCLAELGRVEEALHLFDQMPCKPDIFSYNTVMKGLCR-DGRWEDAGTLIAGMV 332

Query: 112 RVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD 171
           R  C     TF   +       +    +E  ++M ++G  P+ F  + +++ L + G VD
Sbjct: 333 RKDCPPDEVTFNTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCVD 392

Query: 172 LGIKVLKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCF 230
             +++L+     PN + +   L  LC+ +   +V  ++  M+R     +   F ++++C 
Sbjct: 393 DALELLRTIPWKPNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCL 452

Query: 231 CKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNV 290
           C+ G +    ++L  M   G S  +  +  LI+GF     +D A  L++ M    C  NV
Sbjct: 453 CQKGLVDYGAEVLREMTKFGCSPDIIIYNSLINGFSENGSVDDALELFKNM---SCKRNV 509

Query: 291 VTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDG 350
           VTY  ++KG   A+ +  A   +  +  +   P+ V  + LI  L + G  + A++V++ 
Sbjct: 510 VTYNYMLKGLCRAEQWEDAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFEK 569

Query: 351 LLELKLVPDSYTFCSLLSTV----CLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAG 406
           + +   +P+   + +L++ +    C+     LL  + C    + D + Y+A L   C+A 
Sbjct: 570 MPKYNCMPNVIIYSTLINGLSDQECVDDALKLLNDMPC----KPDTICYSAALKGLCRAE 625

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
               A +L   M+ K   PD  +F  L+  LC    ++ A  V + ++      N  +++
Sbjct: 626 RWEDAGELILEMIRKNCLPDEVTFSILINNLCHKGFLESATEVSELMLKYECMPNVFIYS 685

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
           ++++   E  R   A+QL R    E    D + Y+ A++GL    R E+A  L ++M   
Sbjct: 686 SLINGFAEQYRAEDALQLLRNMPCEP---DTICYSAALKGLCRAKRWEDARELIAEMFRK 742

Query: 527 AVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
             P +  T+ +++ S C+   + M   + + +
Sbjct: 743 QCPLDEATFSMLIGSLCQNGLVDMATEVFEQM 774



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/388 (22%), Positives = 174/388 (44%), Gaps = 4/388 (1%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           R++ V  +V E+ R    +   TF L +    +  +     E   EM +FG +P+    N
Sbjct: 422 RWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAEVLREMTKFGCSPDIIIYN 481

Query: 159 IVMDVLFKIGRVDLGIKVLKETQLP-NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFY 217
            +++   + G VD  +++ K      N +++N  L  LC+     +   ++  MV+    
Sbjct: 482 SLINGFSENGSVDDALELFKNMSCKRNVVTYNYMLKGLCRAEQWEDAGKLVAEMVKDECL 541

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
           PN   F  L++  C+ G +  A ++   M       +V  ++ LI+G      +D A  L
Sbjct: 542 PNEVTFSTLISYLCQKGFVECAIEVFEKMPKYNCMPNVIIYSTLINGLSDQECVDDALKL 601

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
              M    C P+ + Y++ +KG   A+ +  A   +  +  +   PD V  ++LI+ L  
Sbjct: 602 LNDMP---CKPDTICYSAALKGLCRAERWEDAGELILEMIRKNCLPDEVTFSILINNLCH 658

Query: 338 MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNA 397
            G  + A +V + +L+ + +P+ + + SL++      R     +L+  +  E D + Y+A
Sbjct: 659 KGFLESATEVSELMLKYECMPNVFIYSSLINGFAEQYRAEDALQLLRNMPCEPDTICYSA 718

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
            L   C+A     A +L   M  K    D  +F  L+  LC    +D A  V++ + +  
Sbjct: 719 ALKGLCRAKRWEDARELIAEMFRKQCPLDEATFSMLIGSLCQNGLVDMATEVFEQMSVYG 778

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
            + N  +H+++V+   E  R  + ++L 
Sbjct: 779 CSPNRKIHSSLVNGYSEQRRVDEGLKLL 806



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/449 (20%), Positives = 196/449 (43%), Gaps = 53/449 (11%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKETQ---LPNFLSFNIALCNLCKLND-VSNVKDV 207
           P      +++  L   GR+D   +VL  ++     + ++ N  +   C+    +++ + +
Sbjct: 100 PAAVPCTLLIKKLCAAGRLDDAERVLGASERAGTADAVTRNTLVAGYCRAGGRLADAERM 159

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT--VLIDGF 265
           +  +   G   +V  +  L+  +C+ GR+ +A +L+  M       + N++T   L+ G 
Sbjct: 160 LASLALSG-SADVVTYNTLVAGYCREGRLNDARRLVADM-----PFAPNSYTNSTLLKGL 213

Query: 266 RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL 325
              +  D A  L  +M+++GC PN +T+  +I    +  +   A   LD +        +
Sbjct: 214 CSNKEWDDAEELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGV 273

Query: 326 VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCG 385
           + +N +I CL+++G  ++AL ++D   ++   PD +++ +++  +C  GR+     L+ G
Sbjct: 274 IVYNEIISCLAELGRVEEALHLFD---QMPCKPDIFSYNTVMKGLCRDGRWEDAGTLIAG 330

Query: 386 L---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL--------- 433
           +   +   D V +N ++SY C  G  + A+++   M   G  PDN+++  L         
Sbjct: 331 MVRKDCPPDEVTFNTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGC 390

Query: 434 -----------------------LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
                                  L+GLC A + D+   +   ++ N   ++      I+D
Sbjct: 391 VDDALELLRTIPWKPNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIID 450

Query: 471 RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
            L + G      ++ R         D++ Y   I G  E G  ++A  L+   K+++   
Sbjct: 451 CLCQKGLVDYGAEVLREMTKFGCSPDIIIYNSLINGFSENGSVDDALELF---KNMSCKR 507

Query: 531 NAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           N  TY  ML   C+    +   +L+ +++
Sbjct: 508 NVVTYNYMLKGLCRAEQWEDAGKLVAEMV 536



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/452 (20%), Positives = 199/452 (44%), Gaps = 12/452 (2%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFT--PNT 154
            GR +    ++G   R G    A T    +  Y R    G + +A   +     +   + 
Sbjct: 115 AGRLDDAERVLGASERAG-TADAVTRNTLVAGYCRAG--GRLADAERMLASLALSGSADV 171

Query: 155 FARNIVMDVLFKIGRVDLGIKVLKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
              N ++    + GR++   +++ +    PN  + +  L  LC   +  + ++++  M+R
Sbjct: 172 VTYNTLVAGYCREGRLNDARRLVADMPFAPNSYTNSTLLKGLCSNKEWDDAEELLSEMIR 231

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G  PN   F ++++  C+ G    A  +L  M     +  V  +  +I     L R++ 
Sbjct: 232 SGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGVIVYNEIISCLAELGRVEE 291

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A +L+++M    C P++ +Y +++KG      +  A + +  +  +   PD V  N +I 
Sbjct: 292 ALHLFDQMP---CKPDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDCPPDEVTFNTVIS 348

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLV 393
            L   G  D A++V + + +    PD++T+ +L++ +   G      +L+  +  + + V
Sbjct: 349 YLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCVDDALELLRTIPWKPNTV 408

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            Y ++L   C+A   +   KL   M+      D  +F  ++  LC    +D    V + +
Sbjct: 409 CYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAEVLREM 468

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
                + +  ++ ++++   E G    A++LF+    ++   +VV+Y   ++GL    + 
Sbjct: 469 TKFGCSPDIIIYNSLINGFSENGSVDDALELFKNMSCKR---NVVTYNYMLKGLCRAEQW 525

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
           E+A  L ++M      PN  T+  ++   C++
Sbjct: 526 EDAGKLVAEMVKDECLPNEVTFSTLISYLCQK 557



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 91/390 (23%), Positives = 170/390 (43%), Gaps = 33/390 (8%)

Query: 225 ILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN 284
           +L+   C  GR+ +A ++LG     GT+ +V   T++    R   RL  A  +   +  +
Sbjct: 107 LLIKKLCAAGRLDDAERVLGASERAGTADAVTRNTLVAGYCRAGGRLADAERMLASLALS 166

Query: 285 GCSPNVVTYTSLIKGFM-EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
           G S +VVTY +L+ G+  E ++        DM      AP+   ++ L+  L     +DD
Sbjct: 167 G-SADVVTYNTLVAGYCREGRLNDARRLVADM----PFAPNSYTNSTLLKGLCSNKEWDD 221

Query: 344 ALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-------FSLLPKLVCGLEVEADLVVYN 396
           A ++   ++     P+  TF  ++ ++C +G           + K  C   V    +VYN
Sbjct: 222 AEELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGV----IVYN 277

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            ++S   + G   +A+ L++ M  K   PD +S+  +++GLC   + ++A  +  G+V  
Sbjct: 278 EIISCLAELGRVEEALHLFDQMPCK---PDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRK 334

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP-----LDVVSYTVAIRGLLEGG 511
           +   +      ++  L     CH+ +      +VE+ P      D  +Y+  +  L E G
Sbjct: 335 DCPPDEVTFNTVISYL-----CHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERG 389

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSI 571
             ++A  L   ++ I   PN   YR +L   C+      V +L+ ++I  ++ LD  T  
Sbjct: 390 CVDDALEL---LRTIPWKPNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFG 446

Query: 572 RLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            +   + +          L EM   G  PD
Sbjct: 447 LIIDCLCQKGLVDYGAEVLREMTKFGCSPD 476


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/392 (27%), Positives = 194/392 (49%), Gaps = 7/392 (1%)

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK--ETQLPN--FLSFNIALCN 194
           L   D +   GF  +  +   +++ L KIG     +++LK  E +L N   + +NI + +
Sbjct: 149 LHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINS 208

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           LCK   VS+   +   M+ K   P+V  F  L+  FC +G++ EA+ L   M+    +  
Sbjct: 209 LCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPD 268

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           V  +++L+D   +   +  A  +   M++ G  P+VVTY+SL+ G+      + A     
Sbjct: 269 VYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFS 328

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            +   G AP    +N++I+ L K+   D+AL ++  +    + PD+ T+ SL+  +C  G
Sbjct: 329 TMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLG 388

Query: 375 RFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
           R S   +LV  +    + AD++ YN+L+   CK    ++A+ L   + D+G  P  Y++ 
Sbjct: 389 RISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYN 448

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            L+ GLC   ++  A +V+Q +++   +VNA  +  +++ L + G  ++A  L  +    
Sbjct: 449 ILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENN 508

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM 523
               D V+Y   IR L      E+A  L  +M
Sbjct: 509 GIIPDAVTYETIIRALFRKDENEKAEKLLREM 540



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 119/515 (23%), Positives = 236/515 (45%), Gaps = 27/515 (5%)

Query: 70  FIWCAKQRDYFHDVQSFDHMI----------------SVVTRLTGRFETVRGIVGELARV 113
           FI  +   D  +DV SF  M+                S+V      + T   +  +L   
Sbjct: 29  FIPKSNDFDVNNDVSSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELK 88

Query: 114 GCVIKAQTFLLFLRIYWR-GEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDL 172
           G      TF + +  Y   GEM       F ++ + G+ P T   N +++ +   G++  
Sbjct: 89  GITPTIVTFNILVNCYCHLGEM-TFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKE 147

Query: 173 GIKVLKETQLPNF----LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLN 228
            +          F    +S+   +  LCK+ +      ++  +  K    +V M+ I++N
Sbjct: 148 ALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIIN 207

Query: 229 CFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSP 288
             CK   +++AYQL   MIT   S  V  +  LI GF  + +L  A  L+ +MV    +P
Sbjct: 208 SLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINP 267

Query: 289 NVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVY 348
           +V T++ L+    +    + A + L ++  +G  PD+V ++ L+D    +   + A  V+
Sbjct: 268 DVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVF 327

Query: 349 DGLLELKLVPDSYTFCSLLSTV----CLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCK 404
             +  L + P ++++  +++ +     +    SL  ++ C   +  D V YN+L+   CK
Sbjct: 328 STMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCK-GIAPDTVTYNSLIDGLCK 386

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV 464
            G  + A +L + M + G   D  ++  L+  LC    ID+AI + + I       + + 
Sbjct: 387 LGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYT 446

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
           +  ++D L + GR   A  +F+  +++ Y ++  +Y + I GL + G   EA +L S+M+
Sbjct: 447 YNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKME 506

Query: 525 HIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           +  + P+A TY  ++ +  ++   +  ++LL+++I
Sbjct: 507 NNGIIPDAVTYETIIRALFRKDENEKAEKLLREMI 541



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 98/432 (22%), Positives = 188/432 (43%), Gaps = 42/432 (9%)

Query: 175 KVLKETQLPNFLSFNIALCNLCKLND--VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCK 232
           ++L+    P+ + FN  L ++ K N+   +    +   +  KG  P +  F IL+NC+C 
Sbjct: 47  RMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCH 106

Query: 233 MGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVT 292
           +G +  A+ +   ++ LG   +   +  LI+G     +L  A +  + ++  G   + V+
Sbjct: 107 LGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVS 166

Query: 293 YTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
           Y +LI G  +      A   L  +E +    D+V +N++I+ L K  +  DA  +Y  ++
Sbjct: 167 YRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMI 226

Query: 353 ELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFP 408
             ++ PD  TF SL+   C+ G+    F L  ++V    +  D+  ++ L+   CK G  
Sbjct: 227 TKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLK-NINPDVYTFSILVDALCKDGNI 285

Query: 409 NQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAI 468
            +A  +   M+ +G  PD  ++  L+ G C   ++++A +V+    M+   V  H H   
Sbjct: 286 TRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFS--TMSRLGVAPHAH--- 340

Query: 469 VDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAV 528
                                         SY + I GL +    +EA  L+ +M    +
Sbjct: 341 ------------------------------SYNIMINGLGKIKMVDEALSLFKEMCCKGI 370

Query: 529 PPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVN 588
            P+  TY  ++   CK   I    +L+ ++ +  I  D  T   L   + K H    A+ 
Sbjct: 371 APDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIA 430

Query: 589 QLVEMCNLGLIP 600
            + ++ + G+ P
Sbjct: 431 LVKKIKDQGIQP 442



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/298 (25%), Positives = 140/298 (46%), Gaps = 11/298 (3%)

Query: 133 EMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSF 188
           E +G+    F EM      P+ +  +I++D L K G +     +L    K+  +P+ +++
Sbjct: 252 EAFGL----FHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTY 307

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           +  +   C +N+V+  K V   M R G  P+   + I++N   K+  + EA  L   M  
Sbjct: 308 SSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCC 367

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
            G +     +  LIDG  +L R+  A  L ++M  NG   +++TY SLI    +      
Sbjct: 368 KGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDK 427

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A + +  ++ +G  P +  +N+LID L K G   +A DV+  LL      +++T+  +++
Sbjct: 428 AIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMIN 487

Query: 369 TVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
            +C  G F+    L+  +E   +  D V Y  ++    +     +A KL   M+ +G 
Sbjct: 488 GLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGL 545



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/328 (24%), Positives = 154/328 (46%), Gaps = 3/328 (0%)

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           L  ++   G +P +VT+  L+  +      + AFS    +   G+ P  +  N LI+ + 
Sbjct: 81  LSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGIC 140

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG--RFSL-LPKLVCGLEVEADLV 393
             G   +AL  +D ++ L    D  ++ +L++ +C  G  R +L + K + G  V  D+V
Sbjct: 141 LNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVV 200

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
           +YN +++  CK    + A +LY+ M+ K  +PD  +F  L+ G C   ++ EA  ++  +
Sbjct: 201 MYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEM 260

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
           V+ N   + +  + +VD L + G   +A  +    + +    DVV+Y+  + G       
Sbjct: 261 VLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEV 320

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
            +A  ++S M  + V P+A++Y +M+    K + +     L +++    I  D  T   L
Sbjct: 321 NKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSL 380

Query: 574 TKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
              + K    S A   + EM N G+  D
Sbjct: 381 IDGLCKLGRISYAWQLVDEMHNNGIPAD 408



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 132/297 (44%), Gaps = 19/297 (6%)

Query: 335 LSKMGSYDDALDV--YDGLLELKLVPDSYTFCSLLSTVCLSG--RFSLLPKLVCGLEVEA 390
           + K   +D   DV  +  +L ++  P    F  +L ++  +    ++    L   LE++ 
Sbjct: 30  IPKSNDFDVNNDVSSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKG 89

Query: 391 ---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
               +V +N L++ +C  G    A  ++  +L  G+ P   +F  L+ G+C   K+ EA+
Sbjct: 90  ITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEAL 149

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
           + +  ++     ++   +  +++ L + G    A+Q+ ++   +    DVV Y + I  L
Sbjct: 150 HFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSL 209

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
            +     +AY LYS+M    + P+  T+  ++L FC    +K    L  +++   I  D 
Sbjct: 210 CKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDV 269

Query: 568 HTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTPVSLFDGF 624
           +T   L   + K  + + A N L  M   G+IPD             +T  SL DG+
Sbjct: 270 YTFSILVDALCKDGNITRAKNMLAVMMKQGVIPD------------VVTYSSLMDGY 314



 Score = 40.4 bits (93), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 35/173 (20%), Positives = 72/173 (41%), Gaps = 5/173 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D  +++ +I  + +L GR      +V E+   G      T+   + +  +       +  
Sbjct: 373 DTVTYNSLIDGLCKL-GRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIAL 431

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP----NFLSFNIALCNLCK 197
             ++   G  P+ +  NI++D L K GR+     V ++  +     N  ++NI +  LCK
Sbjct: 432 VKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCK 491

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
               +  + ++  M   G  P+   +E ++    +     +A +LL  MI  G
Sbjct: 492 EGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRG 544


>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 121/516 (23%), Positives = 225/516 (43%), Gaps = 62/516 (12%)

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF---DEMGRFGFTPNTFARNIVMDVLFK 166
           +   GC     TF   +    R    G VL+A    D M   G  P+      +++ + K
Sbjct: 1   MVETGCPANVVTFTTLMNGLCR---EGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCK 57

Query: 167 IGRVDLGIKVLK---ETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
           +G     + +L+   E+Q+  N + ++  +  LCK  +    +++   M  KG +PNV  
Sbjct: 58  LGDTVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLT 117

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           +  +++ +C  G+ ++A QLL  MI       V  ++ LI+ F +  ++  A  L+ +M+
Sbjct: 118 YNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREML 177

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID--CLSK--- 337
           +    P  +TY+S+I GF +      A    D++ S+G +PD++  N LID  C +K   
Sbjct: 178 RRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHL 237

Query: 338 ------MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-------FSLLPKLVC 384
                 +G+ + A D++  ++   + PD  T  +LL+ +C +G+       F +  K   
Sbjct: 238 IHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKM 297

Query: 385 GLE-------------------------------VEADLVVYNALLSYFCKAGFPNQAVK 413
            L+                               VE D+V YN L+  F K G   +A  
Sbjct: 298 DLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAED 357

Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
           +Y  ML KG  P   ++  ++ G C   +++EA  +   +V    + +    + ++    
Sbjct: 358 IYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYC 417

Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
           +AGR    ++LF          D ++Y   I G  + G    A  ++ +M    V P+  
Sbjct: 418 KAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTI 477

Query: 534 TYRVMLLSFCKERNIKMVKRLLQDV---IDARIELD 566
           T+R ML   C +  ++    +L+D+   +D  +E D
Sbjct: 478 TFRSMLAGLCTKAELQKGLTMLEDLQKSVDHELEDD 513



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 107/443 (24%), Positives = 191/443 (43%), Gaps = 25/443 (5%)

Query: 179 ETQLP-NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIA 237
           ET  P N ++F   +  LC+   V     ++  MV +G  P+   +  ++N  CK+G   
Sbjct: 3   ETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTV 62

Query: 238 EAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLI 297
            A  +L  M       +V  ++ ++D   +      A  ++ +M + G  PNV+TY  +I
Sbjct: 63  SALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMI 122

Query: 298 KGFMEAKMFSIAFSFL-DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
            G+     +S A   L DM+E     PD+V  + LI+   K G    A ++Y  +L   +
Sbjct: 123 DGYCSYGKWSDAEQLLRDMIE-RNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNI 181

Query: 357 VPDSYTFCSLLSTVCLSGR-------FSLLPKLVCGLEVEADLVVYNALLSY-------- 401
            P + T+ S++   C   R       F L+    C      D++  N L+          
Sbjct: 182 FPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCS----PDIITLNTLIDGCCRAKRHL 237

Query: 402 ---FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
              FC+ G  N A  L+  M+  G +PD  +   LL GLC   K+++A+ +++    +  
Sbjct: 238 IHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKM 297

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
            ++      I++ + +  +  +A  LF    V     DVV+Y + I   ++ G    A  
Sbjct: 298 DLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAED 357

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
           +Y +M    + P+  TY  M+  FCK+  ++  ++++  ++      D  T   L K   
Sbjct: 358 IYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYC 417

Query: 579 KFHSSSSAVNQLVEMCNLGLIPD 601
           K       +    EMC  GL+ D
Sbjct: 418 KAGRVDDGLELFSEMCQRGLVAD 440



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 86/394 (21%), Positives = 160/394 (40%), Gaps = 50/394 (12%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
           +R+   DV +F  +I+   +  G+      +  E+ R        T+   +  + +    
Sbjct: 143 ERNIDPDVVTFSALINAFVK-EGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRL 201

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDV-----------LFKIGRVDLGIKVLKETQLPN 184
                 FD M   G +P+    N ++D              ++G V++   + +E  + N
Sbjct: 202 EDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQE-MISN 260

Query: 185 FLSFNIALCN-----LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEA 239
            +S +I  CN     LC+   +    ++  +  +     +     I++N  CK  ++ EA
Sbjct: 261 GVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEA 320

Query: 240 YQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG 299
           + L   +   G    V  + +LI  F +      A  ++ +M+  G  P+ VTY S++ G
Sbjct: 321 WDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDG 380

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
           F +      A   +D + SEG +PD+V  + LI    K G  DD L+++  + +  LV D
Sbjct: 381 FCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVAD 440

Query: 360 SYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
           + T                                YNAL+  FCK G  N A  ++  M+
Sbjct: 441 TIT--------------------------------YNALIHGFCKVGDLNGAQDIFEEMV 468

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
             G  PD  +F  +L GLC   ++ + + + + +
Sbjct: 469 SSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDL 502



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/220 (23%), Positives = 94/220 (42%), Gaps = 13/220 (5%)

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           M++ G   +  +F  L+ GLC   ++ +A+ +   +V      +A  +  IV+ + + G 
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
              A+ + R+    +   +VV Y+  +  L + G   +A  ++++M    + PN  TY  
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 538 MLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLG 597
           M+  +C        ++LL+D+I+  I+ D  T   L     K    S A     EM    
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 598 LIPDEMWRKLGLLSDETMTPVSLFDGFVPCERRAGNANHL 637
           + P             T+T  S+ DGF     R  +A H+
Sbjct: 181 IFP------------TTITYSSMIDGFCK-HSRLEDAKHM 207


>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
 gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
          Length = 1115

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 129/543 (23%), Positives = 240/543 (44%), Gaps = 46/543 (8%)

Query: 57  LLNCPSDLI-ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGC 115
           +L+  SD I AL +F    +  +  H  ++ +HM+ ++ R+  R E +  +   + R   
Sbjct: 97  VLHSISDPIHALFYFKSVGELPNVVHTTETCNHMLEIL-RVHRRVEDMAFVFDLMQRQII 155

Query: 116 VIKAQTFLL-FLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI 174
                T+L+ F  ++ RG +      A ++M   GF  N ++ N ++  L + G     +
Sbjct: 156 RRNVDTYLIIFKSLFIRGGLR-QAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEAL 214

Query: 175 KVLK----ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCF 230
           +V +    E   P+  +F+  +    K  ++  V  ++  M   G  PN+  + I +   
Sbjct: 215 EVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVL 274

Query: 231 CKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA---------------- 274
            + G+I EAY+++  M   G    V  +TVLID     R+LD A                
Sbjct: 275 GRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDK 334

Query: 275 -------------GYL------WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
                        G+L      W +M  +G +P+VVT+T L+    +A   + AF  LD 
Sbjct: 335 VTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDT 394

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
           +  +G  P+L  +N LI  L +    DDALD++  +  L + P +YT+  L+     SG 
Sbjct: 395 MRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGH 454

Query: 376 FSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
                +    ++   +  ++V  NA L    + G   +A  ++N +   G  PD+ ++  
Sbjct: 455 PGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNM 514

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           +++      ++DEAI +   +       +  V  +++D L +AGR  +A Q+F R     
Sbjct: 515 MMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMN 574

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVK 552
               VV+Y + + GL + G+ ++A  L+  M      PN  T+  +L   CK   + +  
Sbjct: 575 LAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLAL 634

Query: 553 RLL 555
           ++ 
Sbjct: 635 KMF 637



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 127/565 (22%), Positives = 239/565 (42%), Gaps = 24/565 (4%)

Query: 98   GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
            GR    + +  EL   G    + T+ + ++ Y +       ++   EM +    P+    
Sbjct: 488  GRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVI 547

Query: 158  NIVMDVLFKIGRVDLGIKV---LKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
            N ++D L+K GRV+   ++   ++E  L P  +++NI L  L K   +     +   M  
Sbjct: 548  NSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNG 607

Query: 214  KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
             G  PN   F  LL+C CK   +  A ++   M T+     V  +  +I GF +  ++  
Sbjct: 608  HGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKN 667

Query: 274  AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL-DMLESEGHAPDLVF-HNVL 331
            A +L+ +M +    P+ VT  +L+ G +++     AF    D     G   D  F  +V+
Sbjct: 668  AIWLFHQM-KKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVM 726

Query: 332  IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL----LPKLVCGLE 387
               L++ G+ + A+   + L+   +  D      ++  +C   + S+      K    L 
Sbjct: 727  GGILTEAGT-EKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELG 785

Query: 388  VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
            V+  L VYN L+  F +      A  L+  M   G  PD +++  L+     + KI+E  
Sbjct: 786  VKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELF 845

Query: 448  NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            ++Y  ++      N   +  ++  L+++ R  KA+ L+   +   +     ++   I GL
Sbjct: 846  DLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGL 905

Query: 508  LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
            L+ GR ++A+ ++  M H    PN+  Y +++  + K  ++       + ++   I  D 
Sbjct: 906  LKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDL 965

Query: 568  HTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKL---GL-LSDETMTPVSLFD- 622
             +   L   +        A++   ++   GL PD +   L   GL  S  T   +SLF  
Sbjct: 966  KSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHE 1025

Query: 623  ----GFVPCERRAGNANHLLLNGGV 643
                G VP        N L+LN G+
Sbjct: 1026 MQNRGIVP---DLYTYNSLILNLGI 1047



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 151/299 (50%), Gaps = 7/299 (2%)

Query: 142  FDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCK 197
            F+EM   G  P+TF  N ++D   K G++    DL  ++L     PN +++N+ + NL K
Sbjct: 813  FEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVK 872

Query: 198  LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
             N +    D+   +V   F P    F  L++   K GR+ +A+++   M+  G   +   
Sbjct: 873  SNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAI 932

Query: 258  WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
            + +L++G+ +L  +D A   +++MV+ G  P++ +YT L+     A     A  + + L+
Sbjct: 933  YNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLK 992

Query: 318  SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
              G  PDLV +N++I+ L +    ++AL ++  +    +VPD YT+ SL+  + + G   
Sbjct: 993  QAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIE 1052

Query: 378  LLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
               K+   L+   ++ ++  YNAL+  +  +G    A  +Y  M+  G  P+  +F  L
Sbjct: 1053 EAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQL 1111



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 108/528 (20%), Positives = 222/528 (42%), Gaps = 19/528 (3%)

Query: 49  APHIVHSTLLN---CPSDLIALSF-FIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVR 104
           AP +V  T+L    C +  I  +F  +   +++    ++ +++ +IS + R   R +   
Sbjct: 366 APDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLR-ANRLDDAL 424

Query: 105 GIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVL 164
            +   +  +G    A T++L +  + +    G  LE F++M   G  PN  A N  +  L
Sbjct: 425 DLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSL 484

Query: 165 FKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV 220
            ++GR+     +  E +     P+ +++N+ +    K+  V     ++  M +    P+V
Sbjct: 485 AEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDV 544

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
            +   L++   K GR+ EA+Q+   M  +  + +V  + +L+ G  +  ++  A  L+E 
Sbjct: 545 IVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFES 604

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           M  +GCSPN +T+ +L+    +     +A      + +    PD++  N +I    K   
Sbjct: 605 MNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQ 664

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYN 396
             +A+ ++  + +L L PD  T C+LL  V  SG+    F +       +    D   + 
Sbjct: 665 IKNAIWLFHQMKKL-LRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWE 723

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            ++          +A+     ++ +    D+   + +++ LC  +K   A NV+      
Sbjct: 724 DVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKE 783

Query: 457 ---NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
               P +   V+  ++D  +E      A  LF          D  +Y   I    + G+ 
Sbjct: 784 LGVKPTLK--VYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKI 841

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
            E + LY +M      PN  TY +++ +  K   +     L  +++  
Sbjct: 842 NELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSG 889



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 80/330 (24%), Positives = 157/330 (47%), Gaps = 4/330 (1%)

Query: 226  LLNCFCKMGRIAEAYQL-LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN 284
            ++   CK  + + A  + +     LG   ++  + +LIDGF  +  +++A  L+E+M   
Sbjct: 760  IIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSA 819

Query: 285  GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
            GC+P+  TY SLI    ++   +  F   D + + G  P+ + +N++I  L K    D A
Sbjct: 820  GCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKA 879

Query: 345  LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSY 401
            +D+Y  L+     P   TF  L+  +  SGR     ++  G+       +  +YN L++ 
Sbjct: 880  MDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNG 939

Query: 402  FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVN 461
            + K G  + A + +  M+ +G  PD  S+  L+  LC A ++D+A++ ++ +       +
Sbjct: 940  YGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPD 999

Query: 462  AHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYS 521
               +  +++ L  + R  +A+ LF          D+ +Y   I  L   G  EEA  +Y 
Sbjct: 1000 LVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYE 1059

Query: 522  QMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
            +++ I + PN +TY  ++  +    N ++ 
Sbjct: 1060 ELQFIGLKPNVFTYNALIRGYTLSGNSELA 1089



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 115/511 (22%), Positives = 213/511 (41%), Gaps = 74/511 (14%)

Query: 56   TLLNCPSDLIALSFFIWCAKQRDY-------FHDVQSF---DHMISVVTRLTGRFETVRG 105
            T +NC  D++  +  I    +++        FH ++     DH +++ T L G  ++  G
Sbjct: 641  TTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKLLRPDH-VTLCTLLPGVIKS--G 697

Query: 106  IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMD--V 163
             + +  R+      Q      R +W   M G++ EA  E     F      R I  D  V
Sbjct: 698  QIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAIL-FGERLVCRAICKDDSV 756

Query: 164  LFKIGRV-----------DLGIKVLKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
            L  I +V           ++ +K  KE  + P    +N+ +    ++++V    ++   M
Sbjct: 757  LIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEM 816

Query: 212  VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
               G  P+   +  L++   K G+I E + L   M+T G   +   + ++I    +  RL
Sbjct: 817  KSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRL 876

Query: 272  DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
            D A  L+  +V    SP   T+  LI G +++     A    D +   G  P+   +N+L
Sbjct: 877  DKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNIL 936

Query: 332  IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-------FSLLPKLVC 384
            ++   K+G  D A + +  +++  + PD  ++  L+  +C++GR       F  L +   
Sbjct: 937  VNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQ--A 994

Query: 385  GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
            GL  + DLV YN +++   ++    +A+ L++ M ++G  PD Y++  L+  L       
Sbjct: 995  GL--DPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNL------- 1045

Query: 445  EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
                                   IV  + EAG+ ++ +Q            +V +Y   I
Sbjct: 1046 ----------------------GIVGMIEEAGKIYEELQFI------GLKPNVFTYNALI 1077

Query: 505  RGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
            RG    G +E AY +Y +M      PN  T+
Sbjct: 1078 RGYTLSGNSELAYGIYKKMMVGGCDPNTGTF 1108



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 130/629 (20%), Positives = 243/629 (38%), Gaps = 71/629 (11%)

Query: 80  FHDVQSFDHMISVVTRLT--------GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWR 131
           F  ++S  H    VT +T        G  + V  I  E+   G      TF + +    +
Sbjct: 322 FTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCK 381

Query: 132 GEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLS 187
                   +  D M + G  PN    N ++  L +  R+D  + +    +     P   +
Sbjct: 382 AGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYT 441

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           + + +    K        +    M  +G  PN+      L    +MGR+ EA  +   + 
Sbjct: 442 YILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELK 501

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
           + G +     + +++  + ++ ++D A  L  +M +  C P+V+   SLI    +A    
Sbjct: 502 SSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVE 561

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A+     +E    AP +V +N+L+  L K G    A+ +++ +      P++ TF +LL
Sbjct: 562 EAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLL 621

Query: 368 STVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
             +C +    L  K+   +  +    D++ +N ++  F K      A+ L++ M  K   
Sbjct: 622 DCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQM-KKLLR 680

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGI---------------VMNNPAVNAHVHTAIV 469
           PD+ +   LL G+  + +I++A  + +                 VM      A    AI+
Sbjct: 681 PDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAIL 740

Query: 470 --DRLIEAGRC---------------HKAIQLFRRAIVE-------KYPLDVVSYTVAIR 505
             +RL+    C               HK   + R   V+       K  L V  Y + I 
Sbjct: 741 FGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKV--YNLLID 798

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
           G LE    E A+ L+ +MK     P+ +TY  ++ +  K   I  +  L  +++    + 
Sbjct: 799 GFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKP 858

Query: 566 DYHTSIRLTKFIFKFHSSSSAVNQLVEM---------CNLGLIPDEMWRKLGLLSDETMT 616
           +  T   +   + K +    A++    +         C  G + D +  K G L D    
Sbjct: 859 NTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLL-KSGRLDDAH-- 915

Query: 617 PVSLFDGFVPCERRAGNANHLLLNGGVGR 645
              +FDG V    R  +A + +L  G G+
Sbjct: 916 --EMFDGMVHYGCRPNSAIYNILVNGYGK 942



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 81/348 (23%), Positives = 157/348 (45%), Gaps = 11/348 (3%)

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           +++  R  RR++   ++++ M +     NV TY  + K          A S L+ +   G
Sbjct: 130 MLEILRVHRRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAG 189

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
              +   +N LI  L + G   +AL+VY  ++   L P   TF +L+     SG+   + 
Sbjct: 190 FVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVA---SGKRRNI- 245

Query: 381 KLVCGL--EVEA-----DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
           K V GL  E+E+     ++  Y   +    + G  ++A ++   M D G  PD  ++  L
Sbjct: 246 KTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVL 305

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           +  LC ARK+D+A+ ++  +  ++   +   +  ++D+  + G   K  +++     + Y
Sbjct: 306 IDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGY 365

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
             DVV++T+ +  L + GR  EA+ L   M+   V PN +TY  ++    +   +     
Sbjct: 366 APDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALD 425

Query: 554 LLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           L  ++    +E   +T I L  +  K      A+    +M   G+ P+
Sbjct: 426 LFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPN 473


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 103/442 (23%), Positives = 198/442 (44%), Gaps = 7/442 (1%)

Query: 101 ETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIV 160
           +   G+  ++   G      T+   +  Y     +  V+   +EM   G  P+ +    +
Sbjct: 255 DRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSL 314

Query: 161 MDVLFKIGRVDLG----IKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
           ++ L   GR          ++++   PN   + I +        +S + D++ +MV  G 
Sbjct: 315 LNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGL 374

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
            P+  +F I+   + K   I EA  +   M   G S  V  +  LID   +L R+D A  
Sbjct: 375 SPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVL 434

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
            + +M+  G +PN+  + SL+ G      +  A  F   + ++G  PD+VF N ++  L 
Sbjct: 435 KFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLC 494

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPK---LVCGLEVEADLV 393
             G    A  + D +  +   PD  ++ +L+   CL GR     K   ++  + ++ D  
Sbjct: 495 TKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEW 554

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            YN LL  +C+AG  + A  ++  ML  G TP   ++  +L GL   R+  EA  +Y  +
Sbjct: 555 TYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNM 614

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
           + +    N  ++  I++ L +     +A +LF+    + + L++ ++ + I  L + GR 
Sbjct: 615 ITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRN 674

Query: 514 EEAYILYSQMKHIAVPPNAYTY 535
           E+A  L++ +    + P+ +TY
Sbjct: 675 EDAMHLFATISSYGLVPDVFTY 696



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 110/467 (23%), Positives = 200/467 (42%), Gaps = 42/467 (8%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
           F +M   G  P+    N ++     IG+    +++L+E       P+  ++   L  LC 
Sbjct: 261 FQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCN 320

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
                  +     M+RKG  PNV ++ IL++ +   G ++E + LL LM+  G S   + 
Sbjct: 321 NGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHI 380

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           + ++   + +   +D A +++ KM Q G SP+VV + +LI    +      A    + + 
Sbjct: 381 FNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMM 440

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
           +EG AP++   N L+  L  +  ++ A + Y  +L   + PD   F ++L  +C  G+  
Sbjct: 441 NEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVM 500

Query: 378 LLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
              +L+  +E      D++ Y  L+   C  G  ++A K  + ML  G  PD +++  LL
Sbjct: 501 KAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLL 560

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            G C A +ID+A  V++                               ++ R  I     
Sbjct: 561 HGYCRAGRIDDAYGVFR-------------------------------EMLRNGITP--- 586

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
             VV+Y+  + GL    R  EA  LY  M       N + Y ++L    K   +    +L
Sbjct: 587 -GVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKL 645

Query: 555 LQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            Q +     +L+  T   +   +FK   +  A++    + + GL+PD
Sbjct: 646 FQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPD 692



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 122/547 (22%), Positives = 230/547 (42%), Gaps = 42/547 (7%)

Query: 85  SFDHMISVVTRLTGR------FETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMV 138
           +F+H+++ V+R++GR       E V  +   + R  C IK    L           Y ++
Sbjct: 51  AFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIR-ECTIKVTPDLC---------TYSIL 100

Query: 139 LEAFDEMGRFGFTPNTFA---------RNIVMDVLFK--------IGRVDLGIKVLKETQ 181
           +  F  MGR      TF           NIV++ L K           +D+ IK + E  
Sbjct: 101 IGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMDILIKRMPELG 160

Query: 182 -LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR---KGFYPNVRMFEILLNCFCKMGRIA 237
             P+ +S+N  L   C         +++ MM     +   PNV  +  ++N F   G++ 
Sbjct: 161 CTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVD 220

Query: 238 EAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLI 297
           +AY L   M+  G   +V  +T +IDG  + + +D A  ++++M+  G  P+  TY  LI
Sbjct: 221 KAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLI 280

Query: 298 KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
            G++    +      L+ + + G  PD   +  L++ L   G   +A   +D ++   + 
Sbjct: 281 HGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIK 340

Query: 358 PDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE----ADLVVYNALLSYFCKAGFPNQAVK 413
           P+   +  L+      G  S +  L+  L VE     D  ++N + + + K    ++A+ 
Sbjct: 341 PNVAIYGILIHGYATKGALSEMHDLL-NLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMH 399

Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
           ++N M  +G +PD  +F  L+  LC   ++D+A+  +  ++    A N  V  ++V  L 
Sbjct: 400 IFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLC 459

Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
              +  KA + +   + +    DVV +   +  L   G+  +A  L   M+ +   P+  
Sbjct: 460 TVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVI 519

Query: 534 TYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEM 593
           +Y  ++   C    I    + L  ++   ++ D  T   L     +      A     EM
Sbjct: 520 SYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREM 579

Query: 594 CNLGLIP 600
              G+ P
Sbjct: 580 LRNGITP 586



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/425 (21%), Positives = 183/425 (43%), Gaps = 77/425 (18%)

Query: 122 FLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI------- 174
           F +    Y +  M    +  F++M + G +P+      ++D L K+GRVD  +       
Sbjct: 381 FNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMM 440

Query: 175 --------------------------------KVLKETQLPNFLSFNIALCNLCKLNDVS 202
                                           ++L +   P+ + FN  LCNLC    V 
Sbjct: 441 NEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVM 500

Query: 203 NVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT--V 260
             + +I +M R G  P+V  +  L+   C +GRI EA + L +M+++G  L  + WT   
Sbjct: 501 KAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVG--LKPDEWTYNT 558

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS-FLDMLESE 319
           L+ G+ R  R+D A  ++ +M++NG +P VVTY++++ G    + FS A   +L+M+ S 
Sbjct: 559 LLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITS- 617

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
           G   ++  +N++++ LSK    D+A  ++  L                            
Sbjct: 618 GKQWNIWIYNIILNGLSKNNCVDEAFKLFQSL---------------------------- 649

Query: 380 PKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
               C  + + ++  +N ++    K+G    A+ L+ T+   G  PD +++  +   L  
Sbjct: 650 ----CSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIE 705

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
              ++E  +++  +  +    N+ +  A+V RL+  G   +A     +   + + L+  +
Sbjct: 706 EGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEAST 765

Query: 500 YTVAI 504
             + I
Sbjct: 766 TAMLI 770



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/388 (22%), Positives = 170/388 (43%), Gaps = 36/388 (9%)

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA-GY 276
           P++  + IL+ CFC+MGR+   +   GL++  G  ++      L+ G    +RL  A   
Sbjct: 92  PDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMDI 151

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML-ESEGHA--PDLVFHNVLID 333
           L ++M + GC+P+VV+Y +L+KGF   K    A   L M+ +S+G +  P++V +  +I+
Sbjct: 152 LIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVIN 211

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLV 393
                G  D A +++  +++  + P+                                +V
Sbjct: 212 GFFTEGQVDKAYNLFLEMMDRGIQPN--------------------------------VV 239

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            Y  ++   CKA   ++A  ++  M+DKG  PDN ++  L+ G     K  E + + + +
Sbjct: 240 TYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEM 299

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
             +    + + + ++++ L   GRC +A   F   I +    +V  Y + I G    G  
Sbjct: 300 SAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGAL 359

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
            E + L + M    + P+ + + ++  ++ K+  I     +   +    +  D      L
Sbjct: 360 SEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGAL 419

Query: 574 TKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
              + K      AV +  +M N G+ P+
Sbjct: 420 IDALCKLGRVDDAVLKFNQMMNEGVAPN 447



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 123/280 (43%), Gaps = 23/280 (8%)

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVC-LSGR----------FSLLPKLV--CGLEV 388
           DDAL ++DGLL          F  LL+ V  +SGR           SL  +++  C ++V
Sbjct: 31  DDALKLFDGLLTHARPASIIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIKV 90

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
             DL  Y+ L+  FC+ G        +  +L  G+  +N     LL+GLC A+++ EA++
Sbjct: 91  TPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMD 150

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEA----GRCHKAIQLFRRAIVEK---YPLDVVSYT 501
           +   ++   P +         + L++      R  +A++L       +    P +VVSY 
Sbjct: 151 I---LIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYA 207

Query: 502 VAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
             I G    G+ ++AY L+ +M    + PN  TY  ++   CK + +   + + Q +ID 
Sbjct: 208 TVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDK 267

Query: 562 RIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            ++ D  T   L             V  L EM   GL PD
Sbjct: 268 GVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPD 307


>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 988

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 123/490 (25%), Positives = 208/490 (42%), Gaps = 25/490 (5%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVM-DVLFKIGRVDL 172
           GC    + F   +  Y     +    +   +M + G TP     NI++  +      +  
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSC 426

Query: 173 GIKVLKETQLPNFLSFNIALCN---------LCKLNDVSNVKDVIGMMVRKGFYPNVRMF 223
            +  L E      L+  + L           LC          VI  M+ +GF P+   +
Sbjct: 427 HLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486

Query: 224 EILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQ 283
             +L   C   ++  A+ L   M   G    V  +T+++D F +   ++ A   + +M +
Sbjct: 487 SKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546

Query: 284 NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
            GC+PNVVTYT+LI  +++AK  S A    + + SEG  P++V ++ LID   K G  + 
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEK 606

Query: 344 ALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFC 403
           A  +++ +   K VPD   +                 +         ++V+Y ALL  FC
Sbjct: 607 ACQIFERMCGSKDVPDVDMY---------------FKQYDDDNSERPNVVIYGALLDGFC 651

Query: 404 KAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAH 463
           K     +A KL + M  +G  P+   +  L+ GLC   K+DEA  V   +  +      +
Sbjct: 652 KLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLY 711

Query: 464 VHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM 523
            +++++DR  +  R   A ++  + +      +VV YT  I GL + G+T+EAY L   M
Sbjct: 712 TYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 771

Query: 524 KHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSS 583
           +     PN  TY  M+  F +   I+    LL+ +    +  +Y T   L     K  + 
Sbjct: 772 EEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGAL 831

Query: 584 SSAVNQLVEM 593
             A N L EM
Sbjct: 832 DVAHNLLEEM 841



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 117/522 (22%), Positives = 226/522 (43%), Gaps = 65/522 (12%)

Query: 60  CPSDLIALSFFIWCAKQRD-YFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIK 118
           C +  + L+F ++   +R     DV ++  M+    +  G  E  R    E+  VGC   
Sbjct: 494 CNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCK-AGLIEQARKWFNEMREVGCTPN 552

Query: 119 AQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK 178
             T+   +  Y + +      E F+ M   G  PN    + ++D   K G+++   ++ +
Sbjct: 553 VVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFE 612

Query: 179 E---------------------TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFY 217
                                 ++ PN + +   L   CKL+ V   + ++  M  +G  
Sbjct: 613 RMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCE 672

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
           PN  +++ L++  CK+G++ EA ++   M   G   ++  ++ LID + +++R D+A  +
Sbjct: 673 PNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKV 732

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
             KM++N C+PNVV YT +I G  +      A+  + M+E +G  P++V +  +ID   +
Sbjct: 733 LSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGR 792

Query: 338 MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNA 397
           +G  +  L++ + +    + P+  T+  L+   C +G                 L V + 
Sbjct: 793 IGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGA----------------LDVAHN 836

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
           LL    +  +P  A      +  +GF  +    +GLL         DE       I  ++
Sbjct: 837 LLEEMKQTHWPTHAAGYRKVI--EGFNKEFIESLGLL---------DE-------IGQDD 878

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE----GGRT 513
            A    ++  +VD LI+A R   A++L     V  +   +V Y+     L+E      + 
Sbjct: 879 TAPFLSLYRLLVDNLIKAQRLEMALRLLEE--VATFSATLVDYSSTYNSLIESLCLANKV 936

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
           ++A+ L+S+M    V P   T+  ++      RN K+ + LL
Sbjct: 937 DKAFRLFSEMSKKGVIPEMQTFCSLIKGLF--RNSKISEALL 976



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 139/654 (21%), Positives = 247/654 (37%), Gaps = 90/654 (13%)

Query: 57  LLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCV 116
           L+  PS +I  SFF+W  +Q  Y H    ++ ++ ++ R     +    ++ ++      
Sbjct: 141 LIERPSAVI--SFFVWAGRQIGYKHTSPVYNALVDLIVRDDDE-KVPEELLQQIRDDDKE 197

Query: 117 IKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV 176
           +  +   + +R Y R   + + LE    +  F F P+    N ++    K   +D    V
Sbjct: 198 VFGEFLNVLVRKYCRSGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLV 257

Query: 177 LKETQLPNFLSFNIAL-CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGR 235
            +E  L N       L C    L  V   ++ + +M  + F P+   +  L++  C+   
Sbjct: 258 HREMSLANLRMDGFTLRCYAYSLCKVGKWREALTLMETENFVPDTVFYTKLISGLCEASL 317

Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
             EA   L  M       +V  ++ L+ G    ++L     +   M+  GC P+   + S
Sbjct: 318 FEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNS 377

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID---------------------- 333
           L+  +  +   S A+  L  +   GH P  V +N+LI                       
Sbjct: 378 LVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYS 437

Query: 334 -------------------CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
                              CL   G Y+ A  V   ++    +PD+ T+  +L  +C + 
Sbjct: 438 EMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNAS 497

Query: 375 R----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           +    F L  ++  G  V AD+  Y  ++  FCKAG   QA K +N M + G TP+  ++
Sbjct: 498 KMELAFLLFEEMKRGGLV-ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTY 556

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             L+     A+K+  A  +++ ++      N   ++A++D   +AG+  KA Q+F R   
Sbjct: 557 TALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCG 616

Query: 491 EKYPLDVVSY------------TVAIRGLLEGG-----RTEEAYILYSQMKHIAVPPNAY 533
            K   DV  Y             V I G L  G     R EEA  L   M      PN  
Sbjct: 617 SKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQI 676

Query: 534 TYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEM 593
            Y  ++   CK   +   + +  ++ +       +T   L    FK      A   L +M
Sbjct: 677 VYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKM 736

Query: 594 CNLGLIP------------------DEMWRKLGLLSDETMTP-----VSLFDGF 624
                 P                  DE ++ + ++ ++   P      ++ DGF
Sbjct: 737 LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 790



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 113/547 (20%), Positives = 208/547 (38%), Gaps = 59/547 (10%)

Query: 100 FETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNI 159
            E       E+   G V+       F R       Y        EM   GF P+T   + 
Sbjct: 429 LELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSK 488

Query: 160 VMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG 215
           V+  L    +++L   + +E +    + +  ++ I + + CK   +   +     M   G
Sbjct: 489 VLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG 548

Query: 216 FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAG 275
             PNV  +  L++ + K  +++ A +L   M++ G   ++  ++ LIDG  +  +++ A 
Sbjct: 549 CTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKAC 608

Query: 276 YLWEKMV-----------------QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
            ++E+M                   N   PNVV Y +L+ GF +      A   LD +  
Sbjct: 609 QIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSM 668

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL 378
           EG  P+ + ++ LID L K+G  D+A +V   + E       YT+ SL+       R  L
Sbjct: 669 EGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDL 728

Query: 379 LPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
             K++  +       ++V+Y  ++   CK G  ++A KL   M +KG  P+  ++  ++ 
Sbjct: 729 ASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMID 788

Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
           G     KI+  + + + +     A N   +  ++D   + G    A  L        +P 
Sbjct: 789 GFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPT 848

Query: 496 DVVSYTVAIRG---------------------------------LLEGGRTEEAYILYSQ 522
               Y   I G                                 L++  R E A  L  +
Sbjct: 849 HAAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEE 908

Query: 523 MKHIAVPPNAY--TYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKF 580
           +   +     Y  TY  ++ S C    +    RL  ++    +  +  T   L K +F+ 
Sbjct: 909 VATFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRN 968

Query: 581 HSSSSAV 587
              S A+
Sbjct: 969 SKISEAL 975


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 101/402 (25%), Positives = 190/402 (47%), Gaps = 7/402 (1%)

Query: 171 DLGIKVLKETQLP----NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEIL 226
           DL +   KE  L     N  + NI +   C+   +     V+G  ++ GF PN   F  L
Sbjct: 86  DLVLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTL 145

Query: 227 LNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGC 286
           +N FC  GR++EA  L+  M+ +    +V     LI+G     R+  A  L ++MV+ GC
Sbjct: 146 INGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGC 205

Query: 287 SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALD 346
             N +TY  ++    ++   ++A      +E       +V ++++ID L K G+ DDAL 
Sbjct: 206 EANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALS 265

Query: 347 VYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV---CGLEVEADLVVYNALLSYFC 403
           +++ +    +  D   + S++  +C  GR+    K++    G  +  ++V ++AL+  F 
Sbjct: 266 LFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFV 325

Query: 404 KAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAH 463
           K G   +A +LYN M+ +G  PD  ++  L+ G C   ++ EA  +   +V      N  
Sbjct: 326 KEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIV 385

Query: 464 VHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM 523
            ++ +++   +A R    ++LF     +    D V+Y   ++G  + G+   A  L+ +M
Sbjct: 386 TYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEM 445

Query: 524 KHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
               VPP+  TY ++L   C    ++    + + +  +R+ L
Sbjct: 446 VSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMIL 487



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 116/470 (24%), Positives = 213/470 (45%), Gaps = 14/470 (2%)

Query: 86  FDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEM 145
           F  + S V R    ++ V G   E+   G      T  + +  + R      +L AF  +
Sbjct: 72  FSKLFSAVAR-RKEYDLVLGFCKEMDLNGIEHNMYTMNIMINCFCRKRK---LLFAFSVV 127

Query: 146 GR---FGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKL 198
           GR   FGF PNT   + +++     GRV   +    ++++    PN ++ N  +  LC  
Sbjct: 128 GRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLK 187

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
             V+    +I  MV+ G   N   +  +LN  CK G  A A  L   M       SV  +
Sbjct: 188 GRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQY 247

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
           +++ID   +   LD A  L+ +M   G   +VV Y+S+I G      +      L  +  
Sbjct: 248 SIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIG 307

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF-- 376
               P++V  + LID   K G   +A ++Y+ ++   + PD+ T+ SL+   C   R   
Sbjct: 308 RNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGE 367

Query: 377 -SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
            + +  L+     E ++V Y+ L++ +CKA   +  ++L+  +  KG   D  ++  L++
Sbjct: 368 ANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQ 427

Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
           G C + K++ A  ++Q +V      +   +  ++D L + G   KA+++F +    +  L
Sbjct: 428 GFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMIL 487

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
            +  Y + I G+    + ++A+ L+  +    V P+  TY VM+   CK+
Sbjct: 488 GIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKK 537



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 98/413 (23%), Positives = 189/413 (45%), Gaps = 39/413 (9%)

Query: 134 MYGMVLEAF---DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFL 186
           + G V EA    D M ++G   N      V++ + K G   L + + ++ +      + +
Sbjct: 186 LKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVV 245

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
            ++I + +LCK  ++ +   +   M  KG   +V  +  ++   C  GR  +  ++L  M
Sbjct: 246 QYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREM 305

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
           I      +V  ++ LID F +  +L  A  L+ +MV  G +P+ +TY+SLI GF +    
Sbjct: 306 IGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRL 365

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
             A   LD++ S+G  P++V +++LI+   K    D+ + ++  +    LV D+ T+ +L
Sbjct: 366 GEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTL 425

Query: 367 LSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
           +   C SG+                                 N A +L+  M+ +G  P 
Sbjct: 426 VQGFCQSGKL--------------------------------NVAKELFQEMVSRGVPPS 453

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
             ++  LL GLC   ++ +A+ +++ +  +   +   ++  I+  +  A +   A  LF 
Sbjct: 454 VVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFC 513

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
              V+    DV++Y V I GL + G   EA +L+ +MK     P+  TY +++
Sbjct: 514 SLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILI 566



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/350 (24%), Positives = 172/350 (49%), Gaps = 8/350 (2%)

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE----TQLPNFLSFNIALCN 194
           L  F+EM   G   +  A + ++  L   GR D G K+L+E      +PN ++F+  +  
Sbjct: 264 LSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDV 323

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
             K   +   K++   MV +G  P+   +  L++ FCK  R+ EA Q+L LM++ G   +
Sbjct: 324 FVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPN 383

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           +  +++LI+ + + +R+D    L+ ++   G   + VTY +L++GF ++   ++A     
Sbjct: 384 IVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQ 443

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            + S G  P +V + +L+D L   G    AL++++ + + +++     +  ++  +C + 
Sbjct: 444 EMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNAS 503

Query: 375 RFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
           +      L C L V+    D++ YN ++   CK G  ++A  L+  M + G  P + ++ 
Sbjct: 504 KVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYN 563

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
            L+R   G   +  ++ + + + M   A +A     +V  ++  GR  K 
Sbjct: 564 ILIRAHLGGSGVISSVELIEEMKMRGFAADASTIKMVV-VMLSDGRLDKT 612



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 98/448 (21%), Positives = 195/448 (43%), Gaps = 41/448 (9%)

Query: 157 RNIVMDVLFKIGR-VDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG 215
           RN ++D+  K+   +DL   +++   LP+ + F+     + +  +   V      M   G
Sbjct: 42  RNGIVDI--KVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNG 99

Query: 216 FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAG 275
              N+    I++NCFC+  ++  A+ ++G                               
Sbjct: 100 IEHNMYTMNIMINCFCRKRKLLFAFSVVG------------------------------- 128

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
               + ++ G  PN +T+++LI GF      S A + +D +    + P++V  N LI+ L
Sbjct: 129 ----RALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGL 184

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADL 392
              G   +AL + D +++     +  T+  +L+ +C SG  +L   L   +E   ++A +
Sbjct: 185 CLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASV 244

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           V Y+ ++   CK G  + A+ L+N M  KG   D  ++  ++ GLC   + D+   + + 
Sbjct: 245 VQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLRE 304

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           ++  N   N    +A++D  ++ G+  +A +L+   +      D ++Y+  I G  +  R
Sbjct: 305 MIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENR 364

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
             EA  +   M      PN  TY +++ S+CK + +    RL  ++    +  D  T   
Sbjct: 365 LGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNT 424

Query: 573 LTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           L +   +    + A     EM + G+ P
Sbjct: 425 LVQGFCQSGKLNVAKELFQEMVSRGVPP 452



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 83/371 (22%), Positives = 165/371 (44%), Gaps = 5/371 (1%)

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
           ++ EA  L   MI      S+  ++ L     R +  D+     ++M  NG   N+ T  
Sbjct: 49  KVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMN 108

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
            +I  F   +    AFS +      G  P+ +  + LI+     G   +A+ + D ++E+
Sbjct: 109 IMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEM 168

Query: 355 KLVPDSYTFCSLLSTVCLSGRFS----LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQ 410
           K  P+  T  +L++ +CL GR +    L+ ++V     EA+ + Y  +L+  CK+G    
Sbjct: 169 KYRPNVVTVNTLINGLCLKGRVTEALVLIDRMV-KYGCEANEITYGPVLNRMCKSGNTAL 227

Query: 411 AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
           A+ L+  M ++        +  ++  LC    +D+A++++  + M     +   +++I+ 
Sbjct: 228 ALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIG 287

Query: 471 RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
            L   GR     ++ R  I      +VV+++  I   ++ G+  EA  LY++M    + P
Sbjct: 288 GLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAP 347

Query: 531 NAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQL 590
           +  TY  ++  FCKE  +    ++L  ++    E +  T   L     K     + +   
Sbjct: 348 DTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLF 407

Query: 591 VEMCNLGLIPD 601
            E+ + GL+ D
Sbjct: 408 CEISSKGLVAD 418


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/436 (22%), Positives = 211/436 (48%), Gaps = 43/436 (9%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFL 186
           +G+++   L   D++   GF  +  +   +++ L K+G     +++L+        P+ +
Sbjct: 276 KGQIH-QALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVV 334

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
            +N  +  +CK   V++  D+    V K  +P+V  +  L++ FC +G++ +A  L   M
Sbjct: 335 MYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKM 394

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
            +      V  +++L+DGF +   +  A  +   M++    P+VVTY+SL+ G+      
Sbjct: 395 TSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEV 454

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
           + A S  + +   G   ++  +N++I+   K+   D+A+ ++  +   ++ PD  T+ SL
Sbjct: 455 NKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSL 514

Query: 367 LSTVCLSGRFSLLPKLVCGLEV---EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           +  +C SGR S   +LV  +     + D++ YN++L   CK    ++A+ L   +  +G 
Sbjct: 515 IDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGI 574

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
            PD  ++  L++GLC + K+++A  V++ +++    ++ + +                  
Sbjct: 575 RPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAY------------------ 616

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
                            TV I+G  + G  +EA  L S+M+     P+A TY +++LS  
Sbjct: 617 -----------------TVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLF 659

Query: 544 KERNIKMVKRLLQDVI 559
           ++    M ++LL+++I
Sbjct: 660 EKDENDMAEKLLREMI 675



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 88/404 (21%), Positives = 188/404 (46%), Gaps = 3/404 (0%)

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           +++ G+ P+       +  FC  G+I +A      +I +G  L   ++  LI+G  ++  
Sbjct: 254 ILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGE 313

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
              A  L  +       P+VV Y ++I G  + K  + AF       S+   PD+  +N 
Sbjct: 314 TKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNA 373

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---E 387
           LI     +G   DA+D+++ +    ++PD YTF  L+   C  G       ++  +    
Sbjct: 374 LISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQS 433

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
           ++ D+V Y++L+  +C     N+A  ++NTM  +G T +  S+  ++ G C  + +DEA+
Sbjct: 434 IKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAM 493

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            +++ +       +   +++++D L ++GR   A++L           D+++Y   +  L
Sbjct: 494 KLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDAL 553

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
            +    ++A  L +++K   + P+  TY +++   C+   ++  +++ +D++     LD 
Sbjct: 554 CKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDV 613

Query: 568 HTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLS 611
           +    + +          A+  L +M   G IPD    ++ +LS
Sbjct: 614 YAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILS 657



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/347 (26%), Positives = 161/347 (46%), Gaps = 9/347 (2%)

Query: 152 PNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDV 207
           P+    N ++D + K   V    DL  + + +   P+  ++N  +   C +  + +  D+
Sbjct: 331 PDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDL 390

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
              M  K   P+V  F IL++ FCK G I EA  +L +M+       V  ++ L+DG+  
Sbjct: 391 FNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCL 450

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
           +  ++ A  ++  M   G + NV +Y  +I GF + KM   A      +  +   PD++ 
Sbjct: 451 VNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVIT 510

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC----LSGRFSLLPKLV 383
           ++ LID L K G    AL++ D +      PD  T+ S+L  +C    +    +LL KL 
Sbjct: 511 YSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLK 570

Query: 384 CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
            G  +  D+  Y  L+   C++G    A K++  +L KG+  D Y++  +++G C     
Sbjct: 571 -GQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLF 629

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
           DEA+ +   +  N    +A  +  I+  L E      A +L R  I+
Sbjct: 630 DEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIM 676



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 117/487 (24%), Positives = 196/487 (40%), Gaps = 59/487 (12%)

Query: 170 VDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
           V L  ++L++   P  + F   L +L K      V  +   M  KG   N     IL+N 
Sbjct: 95  VSLFYRLLRQNPTPPDIEFGKILGSLVKSKHYHTVLSLSQKMEFKGIKLNFLNCNILINS 154

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRL----------RRLDMAGYLWE 279
           FC++G I  A+ +L   +     L        ++ F+RL          +RL +  +L  
Sbjct: 155 FCQLGLIPFAFSVLTRGVYWIEILKDCFDRKNLEDFKRLCWIVLILWDFKRLFLKDFLQS 214

Query: 280 --------------------------------------KMVQNGCSPNVVTYTSLIKGFM 301
                                                 K+++NG  P+ +T T+ IKGF 
Sbjct: 215 RLFNVLHSFKILIEYHKTFIKQKCLLKSFEISIEYTPPKILKNGYEPDTITLTTFIKGFC 274

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVY---DGLLELKLVP 358
                  A  F D + + G   D V +  LI+ L K+G    AL++    DG L   + P
Sbjct: 275 LKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKL---VQP 331

Query: 359 DSYTFCSLLSTVC----LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKL 414
           D   + +++  +C    ++  F L  + V    +  D+  YNAL+S FC  G    A+ L
Sbjct: 332 DVVMYNTIIDGMCKDKHVNDAFDLYSEKVSK-RIFPDVFTYNALISGFCIVGKLKDAIDL 390

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
           +N M  K   PD Y+F  L+ G C    I EA NV   ++  +   +   +++++D    
Sbjct: 391 FNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCL 450

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
               +KA  +F          +V SY + I G  +    +EA  L+ +M H  + P+  T
Sbjct: 451 VNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVIT 510

Query: 535 YRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMC 594
           Y  ++   CK   I     L+ ++     + D  T   +   + K H    A+  L ++ 
Sbjct: 511 YSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLK 570

Query: 595 NLGLIPD 601
             G+ PD
Sbjct: 571 GQGIRPD 577



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 4/151 (2%)

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCN 194
           LE  DEM   G  P+    N ++D L K   VD  I +L + +     P+  ++ I +  
Sbjct: 528 LELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKG 587

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           LC+   + + + V   ++ KG+  +V  + +++  FC  G   EA  LL  M   G    
Sbjct: 588 LCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPD 647

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
              + ++I         DMA  L  +M+  G
Sbjct: 648 AKTYEIIILSLFEKDENDMAEKLLREMIMRG 678


>gi|302767258|ref|XP_002967049.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
 gi|300165040|gb|EFJ31648.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
          Length = 454

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 121/474 (25%), Positives = 199/474 (41%), Gaps = 38/474 (8%)

Query: 115 CVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI 174
           C   A ++   ++   R            EM R    P+ F  N+V+D L K  R+   I
Sbjct: 6   CKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAI 65

Query: 175 KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
           +  +    P+ +++N  L  LCK   V+    + G M   G  P+   +  L++ FCKM 
Sbjct: 66  EFFETMPEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMC 125

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
           +   AY LL LM +   S +V ++  +I+G  + R++D A  L+E+M   GC P+ VTY 
Sbjct: 126 QFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYN 185

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
           +LI G    +    A   L ++      PD +    LI+ L       +A  ++ G+ + 
Sbjct: 186 TLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQ 245

Query: 355 KLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPN--QAV 412
              PD  T   L+S +C+  R  L P L          VV N          +P   +AV
Sbjct: 246 GCAPDLVTHTVLVSKLCI--RRKLRPALS---------VVRN----------YPACPEAV 284

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
            LY        TP       + R L   R  D A  + Q +     A N   +TA    L
Sbjct: 285 ILY--------TP-------IFRELGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGL 329

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
            +     +A + FRR + +    D+V+Y V + G  +  R + A  +   M    +PPN 
Sbjct: 330 GDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNI 389

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSA 586
            TY  ++   C++  ++ +  LL  ++    + D  T   L   +F+     +A
Sbjct: 390 VTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFRVGQVDAA 443



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/267 (23%), Positives = 112/267 (41%), Gaps = 36/267 (13%)

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
           S+   P+ + +  L+  L + G  D A      +   KLVPD +T+  ++ T+C + R S
Sbjct: 3   SQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRIS 62

Query: 378 LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN---------- 427
              +    +  E D+V YN LL   CK G   QA  L+ +M   G TP +          
Sbjct: 63  RAIEFFETMP-EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVF 121

Query: 428 -------------------------YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNA 462
                                    YS+  ++ GLC  RK+D+A  +++ + +     + 
Sbjct: 122 CKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDR 181

Query: 463 HVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQ 522
             +  ++  L    R H+A  L    +   +  D +++T  I GL    R +EA++L+  
Sbjct: 182 VTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQG 241

Query: 523 MKHIAVPPNAYTYRVMLLSFCKERNIK 549
           M      P+  T+ V++   C  R ++
Sbjct: 242 MAKQGCAPDLVTHTVLVSKLCIRRKLR 268



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 6/180 (3%)

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           P+  S+  L++ LC   KID+A +    +       +   +  ++D L +A R  +AI+ 
Sbjct: 8   PNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEF 67

Query: 485 FRRAIVEKYP-LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           F     E  P  DVV+Y   + GL + GR  +A  L+  M+   + P+  TY  ++  FC
Sbjct: 68  F-----ETMPEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFC 122

Query: 544 KERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           K    +    LLQ +   +     ++   +   + K      A     EM   G  PD +
Sbjct: 123 KMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRV 182



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 57/110 (51%)

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M+ +G  P++  + +L++ FCK  R+  A +++  M   G   ++  +  L+    R  +
Sbjct: 345 MLEQGIEPDMVAYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGK 404

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           ++  G L   MV  G  P+V T+++L+ G         A+SFL++  S+G
Sbjct: 405 VEAIGELLHTMVSRGRQPDVATWSTLVAGLFRVGQVDAAYSFLNLAMSQG 454



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 76/157 (48%), Gaps = 8/157 (5%)

Query: 100 FETVRGIVGELARVGCVIKAQTFLLFLRIY--WRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           F+    ++ ++AR G      T+  F +    W+  M       F  M   G  P+  A 
Sbjct: 300 FDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRA--YREFRRMLEQGIEPDMVAY 357

Query: 158 NIVMDVLFKIGRVDLGIKVLK---ETQLP-NFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N+++D   K  R+D+  K+++   ++ LP N +++N  + + C+   V  + +++  MV 
Sbjct: 358 NVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVS 417

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
           +G  P+V  +  L+    ++G++  AY  L L ++ G
Sbjct: 418 RGRQPDVATWSTLVAGLFRVGQVDAAYSFLNLAMSQG 454


>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
 gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
          Length = 424

 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 186/384 (48%), Gaps = 4/384 (1%)

Query: 175 KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
           ++L     P  + FN  L ++ ++     V  +   M  +G   NV    IL+NCFC + 
Sbjct: 30  RMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSILINCFCFLH 89

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
            +   + + G  +  G    V  +T LIDG  R+ + ++A  L ++M   GC P+VVT  
Sbjct: 90  HVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCN 149

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
           SL++G+              ++ S+G  PD+  +++ I+   K+   D+A++++D +   
Sbjct: 150 SLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHR 209

Query: 355 KLVPDSYTFCSLLSTVCLSGR---FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQA 411
            +VP++ T+ +L+  +C + R     +L + +C   +  D++ Y+ LL  FCK G  ++ 
Sbjct: 210 GVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEM 269

Query: 412 VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
           + L+  M  +   PD   +  ++ G+C +RK+ +A  V   +++     + H +TA+VD 
Sbjct: 270 LVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDG 329

Query: 472 LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
           L   G   +A++LFR+   +       SY V ++G L+   T     L  +M       +
Sbjct: 330 LCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADRGFYAD 389

Query: 532 AYTYRVMLLSFCKERNIKMVKRLL 555
           A T R  L  F    +   +K+LL
Sbjct: 390 AVT-RTFLKDFLPGNDSPAIKQLL 412



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/333 (24%), Positives = 151/333 (45%), Gaps = 3/333 (0%)

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           LD A   + +M+     P ++ +  L+   +  K +    S    +E  G   ++   ++
Sbjct: 21  LDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSI 80

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA 390
           LI+C   +   D    V+   L+    PD   F +L+  VC  G+  L   L+  + +  
Sbjct: 81  LINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVG 140

Query: 391 ---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
              D+V  N+L+  +C  G  ++  K+++ M+ KG  PD YS+   + G C   KIDEA+
Sbjct: 141 CVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAM 200

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            ++  +       NA  +  ++  L +A R   A  LFR+        D+++Y+  + G 
Sbjct: 201 ELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGF 260

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
            + G  +E  +L+ +M+   V P+   Y +++   C+ R +K  K +L  +I   ++ D 
Sbjct: 261 CKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDV 320

Query: 568 HTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           HT   L   + +  S   A+    +M   G +P
Sbjct: 321 HTYTALVDGLCREGSIIEALRLFRKMEEDGCMP 353



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 87/351 (24%), Positives = 159/351 (45%), Gaps = 12/351 (3%)

Query: 85  SFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDE 144
            F+ ++S V R+  ++ETV  +  E+   G      T  + +  +            F +
Sbjct: 42  EFNRLLSSVVRMK-KYETVVSLFKEMEFRGIKYNVCTLSILINCFCFLHHVDYGFSVFGK 100

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLND 200
             + GF P+      ++D + +IG+ +L   +LKE  L    P+ ++ N  +   C    
Sbjct: 101 TLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGK 160

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
           +  V+ +  +MV KG  P+V  + I +N +CK+ +I EA +L   M   G   +   +  
Sbjct: 161 IDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNT 220

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           LI    +  R   A  L+ KM   G SP+++ Y++L+ GF +             ++   
Sbjct: 221 LIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRL 280

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
             PDLV + ++I+ + +     DA +V   L+   L PD +T+ +L+  +C  G  S++ 
Sbjct: 281 VKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREG--SIIE 338

Query: 381 KLVCGLEVEADLVV-----YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
            L    ++E D  +     YN LL    +    +  V+L + M D+GF  D
Sbjct: 339 ALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADRGFYAD 389



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 6/260 (2%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G+ + VR I   +   G      ++ +F+  Y + E     +E FDEM   G  PN    
Sbjct: 159 GKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTY 218

Query: 158 NIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N ++  L +  R      L  K+      P+ L+++  L   CK  ++  +  +   M R
Sbjct: 219 NTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQR 278

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +   P++ ++ I++N  C+  ++ +A ++L  +I  G    V+ +T L+DG  R   +  
Sbjct: 279 RLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIE 338

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L+ KM ++GC P   +Y  L++G ++    S     +  +   G   D V    L D
Sbjct: 339 ALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADRGFYADAVTRTFLKD 398

Query: 334 CLSKMGSYDDALDVYDGLLE 353
            L   G+   A+    GL E
Sbjct: 399 FLP--GNDSPAIKQLLGLFE 416


>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
          Length = 632

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 125/508 (24%), Positives = 224/508 (44%), Gaps = 38/508 (7%)

Query: 65  IALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVG-CVIKAQTFL 123
           + + FF W AK+R+Y HD  ++  +I  +  L  ++  +  ++ E+ R   CV+      
Sbjct: 105 VKMQFFRWAAKKRNYQHDTSTYMALIHCL-ELVEQYGEMWKMIQEMVRSPICVVTPMELS 163

Query: 124 LFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP 183
             +R+    +M G  +  F ++      P   A N ++ +L   G+ +      K  +L 
Sbjct: 164 QVIRMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYE------KVHELY 217

Query: 184 NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
           N +S N   C                        P+   +  L++ FCK+GR   A +LL
Sbjct: 218 NEMS-NEGHCQ-----------------------PDTVTYSALISAFCKLGRQDSAIRLL 253

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
             M   G   +   +T++I  F +L  +  A  L+E+M    C P+V TYT LI+G  +A
Sbjct: 254 NEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKA 313

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
                A+ F   ++ EG  PD V  N +I+ L K G  DD L +++ +     +P+  T+
Sbjct: 314 GRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTY 373

Query: 364 CSLL-----STVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
            +++     S   +S  FS   ++  G  +      Y+ L+  FCK     +A+ L   M
Sbjct: 374 NTIIKALFESKSRVSEVFSWFERMK-GSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEM 432

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
            +KGF P   ++  L+  L  A++ D A  ++Q +  N  + +A V+  ++  L +AGR 
Sbjct: 433 DEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRL 492

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
             AI LF          +V +Y   + GL      +EA     +M+     P+  +Y ++
Sbjct: 493 DDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNII 552

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELD 566
           L    K         +L ++ ++ I+ D
Sbjct: 553 LNGLAKTGGPHRAMEMLTNMKNSTIKPD 580



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 65/308 (21%), Positives = 136/308 (44%), Gaps = 19/308 (6%)

Query: 79  YFHDVQS---------FDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLR-I 128
           ++H++Q           ++MI+ + +  GR +    +  E+    C+    T+   ++ +
Sbjct: 322 FYHEMQREGCKPDTVVMNNMINFLGK-AGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKAL 380

Query: 129 YWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSF 188
           +        V   F+ M   G +P+ F  +I++D   K  R++  + +L+E     F   
Sbjct: 381 FESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPC 440

Query: 189 NIALCNLCKLNDVSNVK------DVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
             A C+L  ++ +   K      ++   +       + R++ +++    K GR+ +A  L
Sbjct: 441 PAAYCSL--IDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINL 498

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
              M  LG + +V A+  L+ G  R   LD A     KM ++GC P++ +Y  ++ G  +
Sbjct: 499 FDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAK 558

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
                 A   L  +++    PD V +N ++  LS  G +++A ++   +  L    D  T
Sbjct: 559 TGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLIT 618

Query: 363 FCSLLSTV 370
           + S+L  +
Sbjct: 619 YSSILEAI 626



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/212 (21%), Positives = 94/212 (44%), Gaps = 7/212 (3%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFL 186
           R E   M+LE  DE G   F P   A   ++D L K  R DL  ++ +E +      +  
Sbjct: 421 RIEKAMMLLEEMDEKG---FPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSAR 477

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
            + + + +L K   + +  ++   M + G  PNV  +  L++   +   + EA   +  M
Sbjct: 478 VYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKM 537

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
              G    +N++ ++++G  +      A  +   M  +   P+ V+Y +++     A MF
Sbjct: 538 QEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMF 597

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
             A   +  + + G   DL+ ++ +++ + K+
Sbjct: 598 EEAAELMKEMNALGFEYDLITYSSILEAIGKV 629



 Score = 45.8 bits (107), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 72/170 (42%), Gaps = 1/170 (0%)

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           ++R L  A+ I +AI ++  I        A  + +++  LI  G+  K  +L+     E 
Sbjct: 165 VIRMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEG 224

Query: 493 Y-PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
           +   D V+Y+  I    + GR + A  L ++MK   + P A  Y +++  F K  N+   
Sbjct: 225 HCQPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGA 284

Query: 552 KRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
             L +++       D  T   L + + K      A +   EM   G  PD
Sbjct: 285 LSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPD 334


>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 783

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 152/656 (23%), Positives = 272/656 (41%), Gaps = 85/656 (12%)

Query: 6   KRSLFYTAQ-RTQILKTIISFKSIHQISSP-----KVCATTHQDFPIILAPHIVHSTLLN 59
           K +LF++   RT  + T I   +I +   P     KV ++  + + I        S L  
Sbjct: 18  KPTLFHSYHSRTNPIATSIEVSTIIETLDPMEDGLKVISSRIRSYTIT-------SVLQE 70

Query: 60  CPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKA 119
            P   +    FIW  K   +    ++   +I         FE    ++ EL      I +
Sbjct: 71  QPDTRLGFRLFIWSLKS--WHLRCRTVQDLIIGKLIKENAFELYWKVLQELKNSAIKISS 128

Query: 120 QTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE 179
           + F + +  Y    M    +E+F  M  F   P+ FA N+++  L +     L + V  +
Sbjct: 129 EAFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQ 188

Query: 180 -------------------------TQ--------------LPNFLSFNIALCNLCKLND 200
                                    TQ              LPN + ++I L  LC+   
Sbjct: 189 MLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKK 248

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
           + + + +   M   G   ++  + +LLN FCK G + +A+ LL L+   G  L V  +  
Sbjct: 249 IFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGC 308

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           LI+G  R RR + A   ++KM++    P+V+ YT +I+G  +    + A + L  +   G
Sbjct: 309 LINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERG 368

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----- 375
             PD + +N LI     MG  D+A  +   + +    P+++T+  L+  +C +G      
Sbjct: 369 LRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQ 428

Query: 376 --FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM--------------- 418
             F  + KL C   V    V +N+L++  CKA    +A  L+  M               
Sbjct: 429 HIFKEMEKLGCLPSV----VTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQG 484

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
            DK F  D  S   ++  LC +  I +A  +   +V +    +   +  +++   + G  
Sbjct: 485 TDKVF--DIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNI 542

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
           + A +LF+   ++ +  D V+Y   I GL   GR E+A  ++ QM      P + TY+ +
Sbjct: 543 NGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTI 602

Query: 539 LLSFCKERNIKMVKRL-LQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEM 593
           +   C+E NI +   + ++ + D R   D    +R+    F      +A+ +L+EM
Sbjct: 603 MTWSCRENNISLALSVWMKYLRDFRGWED--EKVRVVAESFDNEELQTAIRRLLEM 656



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 43/215 (20%), Positives = 90/215 (41%)

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
           + + DL  +N +L +  +      A+ +YN ML     PD  ++  L+ GLC   K  +A
Sbjct: 158 DCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDA 217

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
           + ++  +       N  +++ ++  L +A +   A +LF +        D+++Y V + G
Sbjct: 218 LVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNG 277

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
             + G  ++A+ L   +           Y  ++    + R  +      Q ++   I+ D
Sbjct: 278 FCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPD 337

Query: 567 YHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
                 + + + +    + A+  L EM   GL PD
Sbjct: 338 VMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPD 372


>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 950

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 152/656 (23%), Positives = 270/656 (41%), Gaps = 85/656 (12%)

Query: 6   KRSLFYTAQ-RTQILKTIISFKSIHQISSP-----KVCATTHQDFPIILAPHIVHSTLLN 59
           K +LF++   RT  + T I   +I +   P     KV ++  + + I        S L  
Sbjct: 18  KPTLFHSYHSRTNPIATSIEVSTIIETLDPMEDGLKVISSRIRSYTIT-------SVLQE 70

Query: 60  CPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKA 119
            P   +    FIW  K   +    ++   +I         FE    ++ EL      I +
Sbjct: 71  QPDTRLGFRLFIWSLKS--WHLRCRTVQDLIIGKLIKENAFELYWKVLQELKNSAIKISS 128

Query: 120 QTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE 179
           + F + +  Y    M    +E+F  M  F   P+ FA N+++  L +     L + V  +
Sbjct: 129 EAFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQ 188

Query: 180 -------------------------TQ--------------LPNFLSFNIALCNLCKLND 200
                                    TQ              LPN + ++I L  LC+   
Sbjct: 189 MLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKK 248

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
           + + + +   M   G   ++  + +LLN FCK G + +A+ LL L+   G  L V  +  
Sbjct: 249 IFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGC 308

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           LI+G  R RR + A   ++KM++    P+V+ YT +I+G  +    + A + L  +   G
Sbjct: 309 LINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERG 368

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----- 375
             PD + +N LI     MG  D+A  +   + +    P+++T+  L+  +C +G      
Sbjct: 369 LRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQ 428

Query: 376 --FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM--------------- 418
             F  + KL C   V    V +N+L++  CKA    +A  L+  M               
Sbjct: 429 HIFKEMEKLGCLPSV----VTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQG 484

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
            DK F  D  S   ++  LC +  I +A  +   +V +    +   +  +++   + G  
Sbjct: 485 TDKVF--DIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNI 542

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
           + A +LF+   ++ +  D V+Y   I GL   GR E+A  ++ QM      P + TY+ +
Sbjct: 543 NGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTI 602

Query: 539 LLSFCKERNIKMVKRLLQDVI-DARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEM 593
           +   C+E NI +   +    + D R   D    +R+    F      +A+ +L+EM
Sbjct: 603 MTWSCRENNISLALSVWMKYLRDFRGWED--EKVRVVAESFDNEELQTAIRRLLEM 656



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 91/432 (21%), Positives = 177/432 (40%), Gaps = 51/432 (11%)

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           F +L+  + + G   +A +   LM        + A+ +++    R     +A  ++ +M+
Sbjct: 131 FSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQML 190

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
           +   +P+VVTY  LI G  +      A    D +   G  P+ + +++++  L +     
Sbjct: 191 KCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIF 250

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSG----RFSLLPK---------------LV 383
           DA  ++  +       D  T+  LL+  C SG     F+LL                 L+
Sbjct: 251 DAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLI 310

Query: 384 CGL-------------------EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
            GL                    ++ D+++Y  ++    + G   +A+ L   M ++G  
Sbjct: 311 NGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLR 370

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           PD   +  L++G C    +DEA ++   I  ++   N H ++ ++  + + G  +KA  +
Sbjct: 371 PDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHI 430

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP-------------N 531
           F+          VV++   I GL +  R EEA +L+ QM+ +  P              +
Sbjct: 431 FKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFD 490

Query: 532 AYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLV 591
             + +VM+   C+   I    +LL  ++D+ +  D  T   L     KF + + A     
Sbjct: 491 IASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFK 550

Query: 592 EMCNLGLIPDEM 603
           EM   G +PD +
Sbjct: 551 EMQLKGHMPDSV 562


>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 721

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 123/477 (25%), Positives = 206/477 (43%), Gaps = 46/477 (9%)

Query: 135 YGMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLS 187
           YG   EA   F EMG  G   N    +I++D   + G +D  I    K+ K +       
Sbjct: 205 YGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYP 264

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           +N  +   CKL + S  K     M+ KG  P V  +  L++ +C  G   +A+++   M 
Sbjct: 265 YNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMT 324

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
             G S +   +T +I G  R   +  A  L+ +M +    P+ VTY  +I+G   +   S
Sbjct: 325 AKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNIS 384

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            AF  LD +  +G  PD   +  LI  L  +G   +A +  D L +     ++  + +L+
Sbjct: 385 EAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALV 444

Query: 368 STVCLSGRFS-------------LLPKLVC------------------GLEVE------- 389
              C  GRF              +   LVC                  GL  E       
Sbjct: 445 HGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLR 504

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            D V+Y  ++    KAG   +A  L++ M+D+G  P+  ++  L+ GLC A  +D+A  +
Sbjct: 505 PDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELL 564

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
            +  ++++   N   +   +D L   G   KA+QL   A+++ +    VSY + IRG   
Sbjct: 565 SKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQL-HHAMLKGFLATTVSYNILIRGFCR 623

Query: 510 GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
            G+ EEA  L   M    + P+  TY  ++   CK  N++   +L   ++D  ++ D
Sbjct: 624 LGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPD 680



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/459 (22%), Positives = 211/459 (45%), Gaps = 9/459 (1%)

Query: 83  VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF 142
           V  ++ +I+   +L G     +    E+   G      T+   +  Y     +    + +
Sbjct: 262 VYPYNSLINGYCKL-GNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVY 320

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKL 198
           +EM   G +PNT+    ++  L +   +   I++  E +    +P+ +++N+ +   C+ 
Sbjct: 321 NEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRS 380

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
            ++S    ++  MV KGF P+   +  L++  C +GR++EA + +  +      L+   +
Sbjct: 381 GNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCY 440

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
           + L+ G+ +  R   A      MV+ G + ++V Y  LI G          F  L  + +
Sbjct: 441 SALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHN 500

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG---R 375
            G  PD V +  +ID  SK G+  +A  ++D +++   +P+  T+ +L++ +C +G   +
Sbjct: 501 HGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDK 560

Query: 376 FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
             LL K     +V  + + Y   L +  + G   +AV+L++ ML KGF     S+  L+R
Sbjct: 561 AELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAML-KGFLATTVSYNILIR 619

Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
           G C   KI+EA  +  G+  N+   +   ++ I+    +     +AI+L+   + +    
Sbjct: 620 GFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKP 679

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
           D ++Y+  + G    G  E+A+ L  +M    +  N  T
Sbjct: 680 DTLAYSFLVHGCCIAGELEKAFELRDEMIRRGMRSNHVT 718



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 113/476 (23%), Positives = 201/476 (42%), Gaps = 38/476 (7%)

Query: 166 KIGRVDLGIKVLKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFE 224
           K    +L  K + E  L  N ++++I + + C+  ++ N    +  M +      V  + 
Sbjct: 207 KFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYN 266

Query: 225 ILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN 284
            L+N +CK+G  + A      MI  G + +V  +T LI G+        A  ++ +M   
Sbjct: 267 SLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAK 326

Query: 285 GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
           G SPN  T+T++I G   A M + A      ++     P  V +NV+I+   + G+  +A
Sbjct: 327 GISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEA 386

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSY 401
             + D ++    VPD+YT+  L+S +C  GR S   + V  L  +    + + Y+AL+  
Sbjct: 387 FHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHG 446

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVN 461
           +CK G    AV     M+++G   D   +  L+ G            + + +  +    +
Sbjct: 447 YCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPD 506

Query: 462 AHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYS 521
           A ++T ++DR  +AG   +A  L+   + E    +VV+YT  I GL + G  ++A +L  
Sbjct: 507 AVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSK 566

Query: 522 QMKHIAVPPNAYT----------------------------------YRVMLLSFCKERN 547
           +     V PN  T                                  Y +++  FC+   
Sbjct: 567 ETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLKGFLATTVSYNILIRGFCRLGK 626

Query: 548 IKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           I+   +LL  + D  I  DY T   +     K  +   A+     M + GL PD +
Sbjct: 627 IEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTL 682



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 95/407 (23%), Positives = 180/407 (44%), Gaps = 29/407 (7%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+   ++  + +LC+L D +  K++I  M       ++ ++ +L++  CK  RI EA ++
Sbjct: 129 PDIYIYSAVVRSLCELKDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEI 188

Query: 243 LGLMITLGTSLSVNAW--------------------------TVLIDGFRRLRRLDMAGY 276
              ++  G   +V  +                          ++LID F R   +D A  
Sbjct: 189 KNCLMQKGLEANVVTYYGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIG 248

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
             +KM +      V  Y SLI G+ +    S A  + D +  +G  P +V +  LI    
Sbjct: 249 FLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYC 308

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLV 393
             G +  A  VY+ +    + P++YTF +++S +C +   +   +L   +   ++    V
Sbjct: 309 NEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEV 368

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            YN ++   C++G  ++A  L + M+ KGF PD Y++  L+ GLC   ++ EA      +
Sbjct: 369 TYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDL 428

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
             ++  +N   ++A+V    + GR   A+   R  +     +D+V Y + I G      T
Sbjct: 429 HKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDT 488

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
              + L  +M +  + P+A  Y  M+    K  N+K    L   ++D
Sbjct: 489 RALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVD 535



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 99/431 (22%), Positives = 189/431 (43%), Gaps = 13/431 (3%)

Query: 175 KVLKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKM 233
           +++K+  L P   + +  L  L +    ++V  +   +V     P++ ++  ++   C++
Sbjct: 85  RLMKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCEL 144

Query: 234 GRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTY 293
               +A +++  M      LS+  + VLI G  + RR+  A  +   ++Q G   NVVTY
Sbjct: 145 KDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTY 204

Query: 294 TSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE 353
                 F EA++      F +M E +G   + + +++LID   + G  D+A+   D + +
Sbjct: 205 YG---KFNEAELL-----FKEMGE-KGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTK 255

Query: 354 LKLVPDSYTFCSLLSTVCLSGRFSLLP---KLVCGLEVEADLVVYNALLSYFCKAGFPNQ 410
             +    Y + SL++  C  G  S        +    +   +V Y +L+S +C  G  ++
Sbjct: 256 ASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHK 315

Query: 411 AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
           A K+YN M  KG +P+ Y+F  ++ GLC A  + EAI ++  +       +   +  +++
Sbjct: 316 AFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIE 375

Query: 471 RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
               +G   +A  L    + + +  D  +Y   I GL   GR  EA      +       
Sbjct: 376 GHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKL 435

Query: 531 NAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQL 590
           N   Y  ++  +CKE   K      + +++  + +D      L     + H + +    L
Sbjct: 436 NNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLL 495

Query: 591 VEMCNLGLIPD 601
            EM N GL PD
Sbjct: 496 KEMHNHGLRPD 506



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 51/284 (17%), Positives = 120/284 (42%), Gaps = 12/284 (4%)

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL 382
           P++   + L++ L +   ++D L ++D ++   + PD Y + +++ ++C    F+   ++
Sbjct: 94  PEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEM 153

Query: 383 VCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
           +  +E    +  +VVYN L+   CK+    +A+++ N ++ KG   +  ++ G       
Sbjct: 154 IHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYG------- 206

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
             K +EA  +++ +       N   ++ ++D     G    AI    +         V  
Sbjct: 207 --KFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYP 264

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           Y   I G  + G    A   + +M    + P   TY  ++  +C E       ++  ++ 
Sbjct: 265 YNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMT 324

Query: 560 DARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
              I  + +T   +   + + +  + A+    EM    ++P E+
Sbjct: 325 AKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEV 368


>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
 gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
          Length = 535

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 109/459 (23%), Positives = 212/459 (46%), Gaps = 41/459 (8%)

Query: 151 TPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKD 206
            P++     ++D LFK G  D G+    K++     P  L++ + +  LCK + V    D
Sbjct: 103 APDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACD 162

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
           V   M+RKG  P++  +  L++   K GR+ EA +L+ LMI  G   +  A+T ++ G  
Sbjct: 163 VFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLC 222

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
           +  R+  A    ++M +    P V TY+ ++ G++       AF+ ++ +     APD +
Sbjct: 223 KCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTI 282

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP---KLV 383
            + + I+ L  +G  ++A  V++ ++E    PD +T+  ++   C  G  +      +L+
Sbjct: 283 SYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLM 342

Query: 384 CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
               V+ +  +Y  ++  F K+    +A++LY  +L  G  P   ++  ++  LC  +K+
Sbjct: 343 DKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKM 402

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           DEA+ + +                               ++ RR   E+    +V+Y++ 
Sbjct: 403 DEALELLR-------------------------------EMQRRK--EELEPSIVTYSMI 429

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           I GL + G  E A+ L ++M    V P+ +TY  ++ +      +     LL++++ A I
Sbjct: 430 IHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGI 489

Query: 564 ELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
             D HT   L + + +     +A + L EM   G  P+E
Sbjct: 490 FPDDHTYGTLVQILCR-SDVDAAWDLLQEMMRNGHTPNE 527



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 104/435 (23%), Positives = 187/435 (42%), Gaps = 20/435 (4%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKM--------- 233
           PN  SFNI L      +D   V  ++  M  +G   N     ++L+  C           
Sbjct: 27  PNVSSFNILLRGFAARDDFEVVNALLREMKARGITSNGATHGVILSALCARRDLDKAVSY 86

Query: 234 --GRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVV 291
              R  EA +L    I    S++   +T ++DG  +    D     +EKMV + C P ++
Sbjct: 87  FNSRTEEACRLFE-AIEAPDSVT---YTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLL 142

Query: 292 TYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGL 351
           TYT L+ G  +A     A    + +  +GH PD++ ++ LID LSK G  D+A  + D +
Sbjct: 143 TYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLM 202

Query: 352 LELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLV---VYNALLSYFCKAGFP 408
           +     P +  + S+++ +C  GR     K +  +           Y+ +++ +   G  
Sbjct: 203 IARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKV 262

Query: 409 NQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAI 468
            +A  +   M D+   PD  S+   +  L    + +EA  V++ +V      + H +  I
Sbjct: 263 EEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGII 322

Query: 469 VDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAV 528
           +D   + G    A  + R         +   YT+ + G ++  R EEA  LY ++    +
Sbjct: 323 IDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGI 382

Query: 529 PPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH--TSIRLTKFIFKFHSSSSA 586
            P+  TY  ++ + CK + +     LL+++   + EL+    T   +   + K      A
Sbjct: 383 LPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERA 442

Query: 587 VNQLVEMCNLGLIPD 601
            + L EM + G+IPD
Sbjct: 443 FDLLAEMIDNGVIPD 457



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/319 (22%), Positives = 131/319 (41%), Gaps = 33/319 (10%)

Query: 287 SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALD 346
            PNV ++  L++GF     F +  + L  +++ G   +   H V++  L      D A+ 
Sbjct: 26  EPNVSSFNILLRGFAARDDFEVVNALLREMKARGITSNGATHGVILSALCARRDLDKAVS 85

Query: 347 VYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA-DLVVYNALLSYFCKA 405
            ++   E          C L   +                  EA D V Y A++    KA
Sbjct: 86  YFNSRTE--------EACRLFEAI------------------EAPDSVTYTAIVDGLFKA 119

Query: 406 GFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVH 465
           G  +  ++ Y  M+     P   ++  L+ GLC A K++ A +V++ ++      +   +
Sbjct: 120 GNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAY 179

Query: 466 TAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKH 525
           ++++D L +AGR  +A +L    I    P   V+YT  + GL + GR +EA     +M+ 
Sbjct: 180 SSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRR 239

Query: 526 IAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHS--- 582
             + P   TY  ++  +     ++    +++++ D     D   +I  T FI   +S   
Sbjct: 240 RRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPD---TISYTMFIEALYSIGR 296

Query: 583 SSSAVNQLVEMCNLGLIPD 601
              A      M   G  PD
Sbjct: 297 REEAEKVFETMVEKGCKPD 315



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 83/167 (49%), Gaps = 7/167 (4%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL------PNFLSFNIA 191
            LE +  + + G  P+T   N V++ L K+ ++D  +++L+E Q       P+ +++++ 
Sbjct: 370 ALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMI 429

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           +  L K+       D++  M+  G  P+   +  L+      G+++ A +LL  M+  G 
Sbjct: 430 IHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGI 489

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIK 298
               + +  L+    R   +D A  L ++M++NG +PN  T+ ++ K
Sbjct: 490 FPDDHTYGTLVQILCR-SDVDAAWDLLQEMMRNGHTPNEFTFKAVEK 535


>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 140/618 (22%), Positives = 267/618 (43%), Gaps = 68/618 (11%)

Query: 17  QILKTIISFKSIHQISSPKVCAT-THQDFPIILAPHIVHSTLLNC------------PSD 63
           +I KT++S  +    ++P + ++   Q   +IL+ HI+  T  +C              D
Sbjct: 33  KISKTLVSSGAKSLQTTPSLLSSLNSQTVHLILSNHIL--TAESCLDFFHFIRKNYYKPD 90

Query: 64  L---IALSFFIWCAKQRDYFHDVQSF---DHMISVVTRLTGRFETVRGIVGELARVGC-- 115
           L   I L F ++ +++ D  H  Q F    H+ +      G    V  ++  L    C  
Sbjct: 91  LRAYITLIFKLYRSRKSDKLHKSQKFAEIRHLFNCAAVDDGLRVPVT-VIASLVDDACNE 149

Query: 116 ------VIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
                   K + F L  R+Y   +M+G  LEAF+ M + GF  +  +  + +  L + G+
Sbjct: 150 SKCNRAKFKEKFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQ 209

Query: 170 VDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
           VD  ++  +                                MV       V    I+L+ 
Sbjct: 210 VDSCLRFFRR-------------------------------MVNLDVEVTVYSLTIVLDG 238

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY--LWEKMVQNGCS 287
            CK G +    +L+  +   G   +V  +   I+G+   +RLD+ G   +   M + G +
Sbjct: 239 LCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGY--FKRLDLGGVAEILTLMEKEGVA 296

Query: 288 PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
            NVVTYT LI GF        A    + +  +G   D+  +  +I C  + G+   AL +
Sbjct: 297 CNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVL 356

Query: 348 YDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCK 404
           +D + +  L+P ++T+ +L+  VC +G+      LV  ++   ++ + V++N L+  +C+
Sbjct: 357 FDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCE 416

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV 464
           +G  ++A++L   M  KG   D +++  +  GLC   + DEA  +   +V    + N   
Sbjct: 417 SGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMS 476

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
            T ++D   + G   +A ++FR    +    ++++Y V I G  + G  +EA+ L  +++
Sbjct: 477 FTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELE 536

Query: 525 HIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSS 584
           +  + P+ YT   ++   C +  + M  +L  ++    +  +  T   +   + K   S 
Sbjct: 537 NRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSE 596

Query: 585 SAVNQLVEMCNLGLIPDE 602
            A     EM   GL PD+
Sbjct: 597 EAFKLYDEMKETGLTPDD 614



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/324 (28%), Positives = 157/324 (48%), Gaps = 13/324 (4%)

Query: 136 GMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSF 188
           G + EA   F+EM   G   + +    ++    + G V   + +  E      +P+  ++
Sbjct: 313 GKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTY 372

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
              +  +CK   +   + ++  M  KG   N  +F  L++ +C+ G + EA +L  +M  
Sbjct: 373 GALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEK 432

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
            G    V A+  +  G  +L R D A  L   MV+ G SPN +++T+LI  + +   F  
Sbjct: 433 KGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVE 492

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A      +E +G+ P+++ +NVLID  SK G+  +A  + D L    L+PD YT  SL+ 
Sbjct: 493 AKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIH 552

Query: 369 TVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
             C+ G+  +  KL   +       ++V Y A++S   K G   +A KLY+ M + G TP
Sbjct: 553 GECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTP 612

Query: 426 DNYSFVGLLRGLCGARKIDEAINV 449
           D+  +  L+  L  A   DE+I++
Sbjct: 613 DDTVYSSLVGSLHSA---DESISM 633


>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g12700, mitochondrial-like
           [Glycine max]
          Length = 555

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 106/433 (24%), Positives = 207/433 (47%), Gaps = 16/433 (3%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALC 193
            L +F+ M R    P  F  + ++  + ++G     I +  +       P+  +  I + 
Sbjct: 39  TLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILIN 98

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
             C    +S    ++G +++ GF PN+  F  L+N FC  G +++A      ++  G  L
Sbjct: 99  CYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPL 158

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
              ++  LI+G  +  +   A  L +KM ++   PN++TY+++I G  + ++ + A    
Sbjct: 159 DEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLF 218

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
            ++ S G   D+V +N LI     +G + +A  +   ++   + PD YTF  L+  +C  
Sbjct: 219 SLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKE 278

Query: 374 GR-------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
           GR       F+++ K       + D+V YNAL+  FC +   ++A +L+N M+ +G  PD
Sbjct: 279 GRIVEAQGVFAVMMK----RGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPD 334

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
             ++  L+ G C    +DEA+ +++ I   N   N   + +++D L + GR     +L  
Sbjct: 335 VLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVD 394

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
                    D+V+Y + +    +    E+A  L+ Q+    + P+ Y Y V++ +FCK  
Sbjct: 395 EMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQ-GIWPDFYMYDVIVENFCKGE 453

Query: 547 NIKMVKRLLQDVI 559
            +K+ +  LQ ++
Sbjct: 454 KLKIAEEALQHLL 466



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/399 (24%), Positives = 197/399 (49%), Gaps = 13/399 (3%)

Query: 136 GMVLEA----FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLS 187
           GMV +A     D M + G+  + F+   +++ L K G+    +++L++ +     PN ++
Sbjct: 139 GMVSKAMAFRLDLMAK-GYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLIT 197

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           ++  +  LCK   +++   +  ++  +G   +V  +  L++  C +G+  EA +LL +M+
Sbjct: 198 YSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMV 257

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
               +     + +L+D   +  R+  A  ++  M++ G  P++VTY +L++GF  +   S
Sbjct: 258 RGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVS 317

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A    + +   G  PD++ +NVLI+   K+   D+A+ ++  +    LVP+  T+ SL+
Sbjct: 318 EARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLI 377

Query: 368 STVCLSGRFSLLPKLV---CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
             +C  GR S + +LV   C      D+V YN  L  FCK+    +A+ L+  ++ +G  
Sbjct: 378 DGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIV-QGIW 436

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           PD Y +  ++   C   K+  A    Q ++++    N   +T +++ L +     +A+ L
Sbjct: 437 PDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTL 496

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM 523
             +      P D V++   I  L E   T++A  L  +M
Sbjct: 497 LSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEM 535



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/353 (26%), Positives = 168/353 (47%), Gaps = 3/353 (0%)

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M+RK   P + +F+ LL    +MG    A  L   + + G + S+   T+LI+ +     
Sbjct: 46  MLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAH 105

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           L  A  L   +++ G  PN+VT+ +LI GF    M S A +F   L ++G+  D   +  
Sbjct: 106 LSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGS 165

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC---LSGRFSLLPKLVCGLE 387
           LI+ L K G   DAL +   + E  + P+  T+ +++  +C   L      L  LV    
Sbjct: 166 LINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRG 225

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
           +  D+V YN+L+   C  G   +A +L   M+     PD+Y+F  L+  LC   +I EA 
Sbjct: 226 ILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQ 285

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            V+  ++      +   + A+++    +    +A +LF R +      DV++Y V I G 
Sbjct: 286 GVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGY 345

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
            +    +EA +L+ +++   + PN  TY  ++   CK   +  V+ L+ ++ D
Sbjct: 346 CKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCD 398



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 67/283 (23%), Positives = 126/283 (44%), Gaps = 6/283 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D  +F+ ++  + +  GR    +G+   + + G      T+   +  +          E 
Sbjct: 264 DDYTFNILVDALCK-EGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEAREL 322

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           F+ M + G  P+    N++++   KI  VD  + + KE +    +PN  ++N  +  LCK
Sbjct: 323 FNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCK 382

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
           L  +S V++++  M  +G  P++  + I L+ FCK     +A  L    I  G       
Sbjct: 383 LGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFR-QIVQGIWPDFYM 441

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           + V+++ F +  +L +A    + ++ +GC PNV TYT +I    +   F  A + L  ++
Sbjct: 442 YDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMD 501

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
                PD V    +I  L +    D A  +   ++E  LV D 
Sbjct: 502 DNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGLVNDE 544



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 58/292 (19%), Positives = 123/292 (42%), Gaps = 3/292 (1%)

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
           + +M++    P +  +  L+   +    +  A S    L S+G  P +    +LI+C   
Sbjct: 43  FNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCH 102

Query: 338 MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVV 394
                 A  +   +L++   P+  TF +L++  C++G  S        L  +    D   
Sbjct: 103 QAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFS 162

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           Y +L++  CK G    A++L   M +    P+  ++  ++ GLC  R I +A+ ++  + 
Sbjct: 163 YGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVT 222

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
                V+   + +++      G+  +A +L    +      D  ++ + +  L + GR  
Sbjct: 223 SRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIV 282

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           EA  +++ M      P+  TY  ++  FC   N+   + L   ++   +E D
Sbjct: 283 EAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPD 334



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 88/233 (37%), Gaps = 38/233 (16%)

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLV 393
           K  + DD L  ++ +L     P  + F  LL  +   G +     L   L    +   + 
Sbjct: 32  KFHTVDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIA 91

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
               L++ +C     + A  L  T+L  GF P+  +F  L+ G C               
Sbjct: 92  TLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFC--------------- 136

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
                 +N  V  A+  RL                + + YPLD  SY   I GL + G+T
Sbjct: 137 ------INGMVSKAMAFRL--------------DLMAKGYPLDEFSYGSLINGLCKNGQT 176

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
            +A  L  +M+   V PN  TY  ++   CK+R I    RL   V    I +D
Sbjct: 177 RDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVD 229


>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Brachypodium distachyon]
          Length = 676

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 128/550 (23%), Positives = 241/550 (43%), Gaps = 40/550 (7%)

Query: 30  QISSPKVCATTHQDFPIILAPH---IVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSF 86
            +SSP    T     P  LAP    +  S+L +      AL  F   A ++D  H ++ +
Sbjct: 42  HVSSPGAVDTD----PGALAPDDAIVALSSLADSAGSAAALELFRRLASRQDVRHLMRLY 97

Query: 87  DHMISVVTRLTGR------FETVRGIVGELARVGCVIKAQTFLLFLRIYWRG---EMYGM 137
              ++  T    R       E +R +V   A  G + +A   +  +R +      E    
Sbjct: 98  ---VTAATTFVDRGSLPMAHEAMRRMVAAFAEAGRLPEAADMVFEMRSHGLPFCVETANW 154

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCK 197
           VL A  + G F +    F      D +   G +           LP+  SF   +   C+
Sbjct: 155 VLRAGLDTGSFAYARKVF------DGMVTRGGL-----------LPDARSFRALIVGCCR 197

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              +  V  ++ +M  +GF  +     +++  FC+ GR  +  +L   M+ +GT  +V  
Sbjct: 198 DGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSELFRRMLEMGTPPNVVN 257

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS-FLDML 316
           +T  IDG  +   +  A Y+ E+MV  G  PNV T+TSLI G  +      AF  FL ++
Sbjct: 258 YTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLI 317

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
           +S  + P++  + V+I    K G    A  +   ++E  L P++ T+ +L+S  C  G F
Sbjct: 318 KSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSF 377

Query: 377 SLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
           +   +L+  +  E    ++  YNAL+   CK G   +A K+     ++G   D  ++  +
Sbjct: 378 NCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVM 437

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           +   C    I  A++++  +  N    + H +T ++ R  +  +  ++ +LF + +  + 
Sbjct: 438 ITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIEL 497

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
                +YT  I G  + G++  A  ++ +M       ++ TY  ++   CKE  ++  + 
Sbjct: 498 VPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARA 557

Query: 554 LLQDVIDARI 563
           L + ++D R+
Sbjct: 558 LYEGMLDKRL 567



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 99/433 (22%), Positives = 178/433 (41%), Gaps = 48/433 (11%)

Query: 209 GMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRL 268
           GM+ R G  P+ R F  L+   C+ GR+ E   LL +M   G  L     TV++  F + 
Sbjct: 174 GMVTRGGLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQK 233

Query: 269 RRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH 328
            R      L+ +M++ G +P                                  P++V +
Sbjct: 234 GRFRDVSELFRRMLEMG-TP----------------------------------PNVVNY 258

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG----RFSLLPKLVC 384
              ID L K      A  V + ++   L P+ YT  SL++ +C  G     F L  KL+ 
Sbjct: 259 TAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIK 318

Query: 385 GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
               + ++  Y  ++  +CK G   +A  L   M+++G  P+  ++  L+ G C     +
Sbjct: 319 SSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFN 378

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
            A  +   +       N + + A++D L + G+  +A ++ R A  +   LD V+YTV I
Sbjct: 379 CAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMI 438

Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
               + G    A  L+++M      P+ +TY  ++  +C++R ++  ++L    +   + 
Sbjct: 439 TEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELV 498

Query: 565 LDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKL---GLLSDETMTPV-SL 620
               T   +     K   S+SA+     M   G   D +       GL  +  +    +L
Sbjct: 499 PTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARAL 558

Query: 621 FDG-----FVPCE 628
           ++G      VPCE
Sbjct: 559 YEGMLDKRLVPCE 571



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 90/436 (20%), Positives = 161/436 (36%), Gaps = 85/436 (19%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFL-----RIYWRGEMYGMVLEAFDEMGRFGFTP 152
           GRF  V  +   +  +G       +  ++     R Y +   Y  VLE   EM   G  P
Sbjct: 234 GRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFY--VLE---EMVAKGLKP 288

Query: 153 NTFARNIVMDVLFKIGRVD----LGIKVLKETQL-PNFLSFNIALCNLCKLNDVSNVKDV 207
           N +    +++ L KIG  +    L +K++K +   PN  ++ + +   CK   ++  + +
Sbjct: 289 NVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEML 348

Query: 208 IGMMV-----------------------------------RKGFYPNVRMFEILLNCFCK 232
           +G MV                                   R+GF PN+  +  L++  CK
Sbjct: 349 LGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCK 408

Query: 233 MGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNV-- 290
            G+I EAY++L +    G  L    +TV+I    +   +  A  L+ +M +NGC P++  
Sbjct: 409 KGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHT 468

Query: 291 ---------------------------------VTYTSLIKGFMEAKMFSIAFSFLDMLE 317
                                             TYTS+I G+ +    + A    + + 
Sbjct: 469 YTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMV 528

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G   D + +  LI  L K    ++A  +Y+G+L+ +LVP   T  +L    C   +  
Sbjct: 529 QNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPCEVTPVTLAFEYCRREKAV 588

Query: 378 LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
           +   ++  L+        N L+      G    A       LD     D  ++   +   
Sbjct: 589 VAVSILDRLDKRRKNHTVNVLVRKLSAIGHVEDASLFLKKALDVDLAVDRLAYTSFINSC 648

Query: 438 CGARKIDEAINVYQGI 453
              +K   A  + + I
Sbjct: 649 YANKKYALATEISEKI 664



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/357 (19%), Positives = 157/357 (43%), Gaps = 21/357 (5%)

Query: 226 LLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA--WTVLIDGFRRLRRLDMAGYLWEKMV- 282
           ++  F + GR+ EA  ++  M + G    V    W VL  G      LD   + + + V 
Sbjct: 120 MVAAFAEAGRLPEAADMVFEMRSHGLPFCVETANW-VLRAG------LDTGSFAYARKVF 172

Query: 283 -----QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
                + G  P+  ++ +LI G           + L +++ +G   D     V++    +
Sbjct: 173 DGMVTRGGLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQ 232

Query: 338 MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC----LSGRFSLLPKLVCGLEVEADLV 393
            G + D  +++  +LE+   P+   + + +  +C    +   F +L ++V    ++ ++ 
Sbjct: 233 KGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMV-AKGLKPNVY 291

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTML-DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
            + +L++  CK G+  +A +L+  ++    + P+ +++  ++ G C   K+  A  +   
Sbjct: 292 THTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGR 351

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           +V    A N + +T ++    + G  + A +L  +   E +  ++ +Y   I GL + G+
Sbjct: 352 MVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGK 411

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
            +EAY +     +  +  +  TY VM+   CK+ +I     L   + +     D HT
Sbjct: 412 IQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHT 468


>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
          Length = 530

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 97/388 (25%), Positives = 187/388 (48%), Gaps = 5/388 (1%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+ + F   L ++ K+   S V  +   M   G  P+V    IL+N FC + R+  A+ +
Sbjct: 110 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 169

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           L  ++ LG       +  LI G     ++  A +L++K +  G  P+VVTY +L+ G  +
Sbjct: 170 LAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 229

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
               S A   L  +  +   P+++ +N +ID L K     +A +++  ++   + PD +T
Sbjct: 230 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFT 289

Query: 363 FCSLLSTVCLSGRF----SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           + SL+  +C    +    +LL ++V   ++  ++VV++ ++   CK G    A  + + M
Sbjct: 290 YNSLIHALCNLCEWKHVTTLLNEMV-NSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMM 348

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
           + +G  PD  ++  L+ G C   ++DEA+ V+  +V      N   +  +++   +  R 
Sbjct: 349 IKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRM 408

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            KA+ L  +  ++    D V+Y   I GL   GR + A  L+ +M      P+  TYR++
Sbjct: 409 DKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRIL 468

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELD 566
           L   CK  ++     LL+ +  + ++ D
Sbjct: 469 LDYLCKNHHLAEAMVLLKAIEGSNLDAD 496



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 86/379 (22%), Positives = 176/379 (46%), Gaps = 3/379 (0%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+  + NI + + C L  +     V+  +++ G  P+   F  L+   C  G+I EA  L
Sbjct: 145 PDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHL 204

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
               I  G    V  +  L++G  ++     A  L   MVQ  C PNV+ Y ++I    +
Sbjct: 205 FDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCK 264

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
            +  + AF+    + ++G +PD+  +N LI  L  +  +     + + ++  K++P+   
Sbjct: 265 DRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVV 324

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
           F +++  +C  G  ++   +V  +    VE D+V Y AL+   C     ++AVK+++TM+
Sbjct: 325 FSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMV 384

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
            KG  P+  S+  L+ G C  +++D+A+ + + + +     +   +  ++  L   GR  
Sbjct: 385 HKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQ 444

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
            AI LF   +      D+V+Y + +  L +     EA +L   ++   +  +   Y + +
Sbjct: 445 HAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAI 504

Query: 540 LSFCKERNIKMVKRLLQDV 558
              C+   ++  + L  ++
Sbjct: 505 DGMCRAGELEAARDLFSNL 523



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 102/398 (25%), Positives = 174/398 (43%), Gaps = 52/398 (13%)

Query: 74  AKQRDYFH---DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYW 130
           + Q D F    DV + + +I+    L  R      ++ +L ++GC     TF   +R   
Sbjct: 135 STQMDSFGIPPDVYTLNILINSFCHLR-RLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLC 193

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFL 186
                G  L  FD+    GF P+      +M+ L K+G     I++L+    +   PN +
Sbjct: 194 VEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVI 253

Query: 187 SFNI--------------------------------------ALCNLCKLNDVSNVKDVI 208
           ++N                                       ALCNLC+   V+ +   +
Sbjct: 254 AYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTL---L 310

Query: 209 GMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRL 268
             MV     PNV +F  +++  CK G IA A+ ++ +MI  G    V  +T L+DG    
Sbjct: 311 NEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLR 370

Query: 269 RRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH 328
             +D A  +++ MV  GC PNV +Y  LI G+ + +    A   L+ +  +G   D V +
Sbjct: 371 SEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTY 430

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCG 385
           N LI  L  +G    A+ ++  ++    +PD  T+  LL  +C +   +   +L K + G
Sbjct: 431 NTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEG 490

Query: 386 LEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
             ++AD++VYN  +   C+AG    A  L++ +  +GF
Sbjct: 491 SNLDADILVYNIAIDGMCRAGELEAARDLFSNLSCQGF 528



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 94/407 (23%), Positives = 180/407 (44%), Gaps = 8/407 (1%)

Query: 86  FDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEM 145
           F  +++ + ++   + TV  +  ++   G      T  + +  +      G       ++
Sbjct: 115 FTKLLTSIAKMK-HYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKL 173

Query: 146 GRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDV 201
            + G  P+    N ++  L   G++   +    K + E   P+ +++   +  LCK+ + 
Sbjct: 174 LKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNT 233

Query: 202 SNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVL 261
           S    ++  MV+K   PNV  +  +++  CK  ++ EA+ L   MIT G S  +  +  L
Sbjct: 234 SAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSL 293

Query: 262 IDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH 321
           I     L        L  +MV +   PNVV +++++    +  M +IA   +DM+   G 
Sbjct: 294 IHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGV 353

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPK 381
            PD+V +  L+D        D+A+ V+D ++    VP+  ++  L++  C   R      
Sbjct: 354 EPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMG 413

Query: 382 LVCGLEVE---ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
           L+  + ++   AD V YN L+   C  G    A+ L++ M+  G  PD  ++  LL  LC
Sbjct: 414 LLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLC 473

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
               + EA+ + + I  +N   +  V+   +D +  AG    A  LF
Sbjct: 474 KNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLF 520



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 87/370 (23%), Positives = 152/370 (41%), Gaps = 40/370 (10%)

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           LD A   + +M+     P+ V +T L+    + K +S   S    ++S G  PD+   N+
Sbjct: 93  LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLVCGL 386
           LI+    +     A  V   LL+L   PD+ TF +L+  +C+ G+      L  K + G 
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTI-GE 211

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
             + D+V Y  L++  CK G  + A++L  +M+ K   P+  ++  ++  LC  R++ EA
Sbjct: 212 GFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEA 271

Query: 447 INVYQGIVMN-----------------------------NPAVNAH------VHTAIVDR 471
            N++  ++                               N  VN+       V + +VD 
Sbjct: 272 FNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDA 331

Query: 472 LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
           L + G    A  +    I      DVV+YT  + G       +EA  ++  M H    PN
Sbjct: 332 LCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPN 391

Query: 532 AYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLV 591
             +Y +++  +C+ + +     LL+ +    +  D  T   L   +        A+    
Sbjct: 392 VRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFH 451

Query: 592 EMCNLGLIPD 601
           EM   G IPD
Sbjct: 452 EMVASGQIPD 461



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 111/227 (48%), Gaps = 3/227 (1%)

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYN 396
           + DDAL  ++ +L +   P +  F  LL+++     +S +  L   ++   +  D+   N
Sbjct: 92  TLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLN 151

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            L++ FC       A  +   +L  G  PDN +F  L+RGLC   KI EA++++   +  
Sbjct: 152 ILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGE 211

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
               +   +  +++ L + G    AI+L R  + +    +V++Y   I  L +  +  EA
Sbjct: 212 GFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEA 271

Query: 517 YILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           + L+S+M    + P+ +TY  ++ + C     K V  LL ++++++I
Sbjct: 272 FNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKI 318


>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Vitis vinifera]
          Length = 625

 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 140/618 (22%), Positives = 267/618 (43%), Gaps = 68/618 (11%)

Query: 17  QILKTIISFKSIHQISSPKVCAT-THQDFPIILAPHIVHSTLLNC------------PSD 63
           +I KT++S  +    ++P + ++   Q   +IL+ HI+  T  +C              D
Sbjct: 29  KISKTLVSSGAKSLQTTPSLLSSLNSQTVHLILSNHIL--TAESCLDFFHFIRKNYYKPD 86

Query: 64  L---IALSFFIWCAKQRDYFHDVQSF---DHMISVVTRLTGRFETVRGIVGELARVGC-- 115
           L   I L F ++ +++ D  H  Q F    H+ +      G    V  ++  L    C  
Sbjct: 87  LRAYITLIFKLYRSRKSDKLHKSQKFAEIRHLFNCAAVDDGLRVPVT-VIASLVDDACNE 145

Query: 116 ------VIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
                   K + F L  R+Y   +M+G  LEAF+ M + GF  +  +  + +  L + G+
Sbjct: 146 SKCNRAKFKEKFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQ 205

Query: 170 VDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
           VD  ++  +                                MV       V    I+L+ 
Sbjct: 206 VDSCLRFFRR-------------------------------MVNLDVEVTVYSLTIVLDG 234

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY--LWEKMVQNGCS 287
            CK G +    +L+  +   G   +V  +   I+G+   +RLD+ G   +   M + G +
Sbjct: 235 LCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGY--FKRLDLGGVAEILTLMEKEGVA 292

Query: 288 PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
            NVVTYT LI GF        A    + +  +G   D+  +  +I C  + G+   AL +
Sbjct: 293 CNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVL 352

Query: 348 YDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCK 404
           +D + +  L+P ++T+ +L+  VC +G+      LV  ++   ++ + V++N L+  +C+
Sbjct: 353 FDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCE 412

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV 464
           +G  ++A++L   M  KG   D +++  +  GLC   + DEA  +   +V    + N   
Sbjct: 413 SGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMS 472

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
            T ++D   + G   +A ++FR    +    ++++Y V I G  + G  +EA+ L  +++
Sbjct: 473 FTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELE 532

Query: 525 HIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSS 584
           +  + P+ YT   ++   C +  + M  +L  ++    +  +  T   +   + K   S 
Sbjct: 533 NRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSE 592

Query: 585 SAVNQLVEMCNLGLIPDE 602
            A     EM   GL PD+
Sbjct: 593 EAFKLYDEMKETGLTPDD 610



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 88/316 (27%), Positives = 151/316 (47%), Gaps = 10/316 (3%)

Query: 136 GMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSF 188
           G + EA   F+EM   G   + +    ++    + G V   + +  E      +P+  ++
Sbjct: 309 GKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTY 368

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
              +  +CK   +   + ++  M  KG   N  +F  L++ +C+ G + EA +L  +M  
Sbjct: 369 GALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEK 428

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
            G    V A+  +  G  +L R D A  L   MV+ G SPN +++T+LI  + +   F  
Sbjct: 429 KGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVE 488

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A      +E +G+ P+++ +NVLID  SK G+  +A  + D L    L+PD YT  SL+ 
Sbjct: 489 AKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIH 548

Query: 369 TVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
             C+ G+  +  KL   +       ++V Y A++S   K G   +A KLY+ M + G TP
Sbjct: 549 GECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTP 608

Query: 426 DNYSFVGLLRGLCGAR 441
           D+  +  L+  L  A 
Sbjct: 609 DDTVYSSLVGSLHSAE 624


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 99/417 (23%), Positives = 203/417 (48%), Gaps = 7/417 (1%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G F+  + ++ +++ +G  + A T+   +R + + EM+    +   EM   G  P     
Sbjct: 256 GEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTY 315

Query: 158 NIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N +M  L ++GRV    + L     E  +P+ +S+N  +    +L + +    +   +  
Sbjct: 316 NTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRS 375

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           K   P+V  +  L++  C+ G +  A  +   MI  G    V  +T+L+ GF ++  L M
Sbjct: 376 KNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPM 435

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L+++M+  G  P+ + YT+ I G ++    S AF   + +++EG  PDL+ +NVLI+
Sbjct: 436 AKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLIN 495

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEA 390
            L K+G++DDA ++   +    +VPD  T+ S++    +SG      ++   +    +  
Sbjct: 496 GLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHP 555

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
            +V Y  L+  +   G  + A K ++ M DKG +P+  ++  L+ GLC    +D A N++
Sbjct: 556 SVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLF 615

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
             +     + N + +T +++          A++L++  +  +   D  +++  ++ L
Sbjct: 616 AEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHL 672



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 128/540 (23%), Positives = 234/540 (43%), Gaps = 58/540 (10%)

Query: 64  LIALSFFIWCAKQRDYFHDVQSFDHMISVVTR---------LTGRFETVR---GIVGELA 111
           L AL FF W  KQ ++     +F  ++ ++ +         +  +   V+   G++  L 
Sbjct: 66  LTALRFFRWVEKQPNFHRSETAFVAILDILAKNGFMKPAYWVMEKAIEVKVDGGVLDVLV 125

Query: 112 RVGC----VIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK- 166
            +GC     +  +   L ++++ +  +    L  F +M   G  P+    N V+ +L   
Sbjct: 126 GIGCGRNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDK 185

Query: 167 --IGRVDLGIKVLKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMF 223
             +  V+    V+ + Q+ P  ++FN  + + CK  +V    +V+ +M   G  PN   +
Sbjct: 186 SMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSY 245

Query: 224 EILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQ 283
            +L+N     G    A +L+  M  LG  +S + +  LI GF +    + A  L  +M+ 
Sbjct: 246 NVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLG 305

Query: 284 NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
            G  P VVTY +++         S A  +LD++ +E   PDLV +N LI   S++G++ +
Sbjct: 306 RGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAE 365

Query: 344 ALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----------------------FSLLPK 381
           AL ++  L    LVP   T+ +L+   C +G                       F++L +
Sbjct: 366 ALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVR 425

Query: 382 LVCGL----------------EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
             C +                 ++ D + Y   +    K G P++A  +   M  +GF P
Sbjct: 426 GFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPP 485

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           D  ++  L+ GLC     D+A  + Q + +     +   +T+I+   + +G   KA ++F
Sbjct: 486 DLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVF 545

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
              + +     VV+YTV I      GR + A   + +M+   V PN  TY  ++   CKE
Sbjct: 546 SDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKE 605



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 142/287 (49%), Gaps = 6/287 (2%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           TG  +  +G+  ++ + G      TF + +R + +     M  E FDEM   G  P+  A
Sbjct: 395 TGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIA 454

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
               +    K+G       + +E +     P+ +++N+ +  LCKL +  +  +++  M 
Sbjct: 455 YTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMR 514

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
            +G  P+   +  +++     G + +A ++   M+  G   SV  +TVLI  +    RLD
Sbjct: 515 LEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLD 574

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A   +++M   G SPNV+TY +LI G  +  M  +A++    +ES+G +P+   + +LI
Sbjct: 575 FAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILI 634

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
           +  S +  + DAL +Y  +L+ ++ PDS T  +L+    LS  + LL
Sbjct: 635 NENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKH--LSKDYKLL 679


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 110/456 (24%), Positives = 212/456 (46%), Gaps = 8/456 (1%)

Query: 83  VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF 142
           V +++ +I  + R  G  E  R +  E+   G      T+   +  Y +  M    +  F
Sbjct: 251 VFTYNMVIGCLAR-EGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVF 309

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL---KETQL-PNFLSFNIALCNLCKL 198
           +EM   G  P+    N +++   K  R+    + L   K+  L PN ++++  +   CK 
Sbjct: 310 EEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKA 369

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
             +         M+R G  PN   +  L++  CK+G + EA++L   M   G +L++  +
Sbjct: 370 GMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTY 429

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
           T L+DG     R+  A  L+  +++ G + N   YTSL  G+++AKM   A   L+ +  
Sbjct: 430 TALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNK 489

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL 378
           +   PDL+ +   I  L +    +D++ V   +++  L  +SY + +L+      G+ + 
Sbjct: 490 KNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTE 549

Query: 379 LPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
              L+  ++   ++  +V Y  L+   CK G   QAV+ ++ M   G  P+   +  L+ 
Sbjct: 550 AVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALID 609

Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
           GLC    ++EA N++  ++    + +  V+T+++D  ++ G   +A+ L  R +     L
Sbjct: 610 GLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMEL 669

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
           D+ +YT  I G    G+ + A  L  +M    + P+
Sbjct: 670 DLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPD 705



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 150/646 (23%), Positives = 267/646 (41%), Gaps = 77/646 (11%)

Query: 9   LFYTAQRTQILKTIISFKSIHQISSPKVCATTHQDFPII----LAPHIVHSTLLNCPSD- 63
           +++T+    I    +S  S   I+S  + +   QD P +    LAP  V   L+    D 
Sbjct: 49  IWFTSFLCVIRYPFVSKPSFDDIASESMRSFLQQDGPHLSDSALAPIWVSKALVKLKGDP 108

Query: 64  LIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFE-TVRGIVGELARVGCVIKAQTF 122
             AL FF     +  + H  +S+  +  ++    G F    R ++ E            +
Sbjct: 109 KSALKFFKEAGARAGFRHAAESYCVLAHIL--FCGMFYLDARSVIKE------------W 154

Query: 123 LLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI-------- 174
           +L  R +   + + M L +   + R GF         V D LF +  VDLG+        
Sbjct: 155 ILLGREFPGCDFFDM-LWSTRNVCRPGFG--------VFDTLFNV-LVDLGMLEEARQCF 204

Query: 175 -KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKM 233
            K+ K   LP   S N  L  L K +           MV  G  P+V  + +++ C  + 
Sbjct: 205 WKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLARE 264

Query: 234 GRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTY 293
           G +  A  L   M   G    +  +  LIDG+ ++  L  A  ++E+M   GC P+V+TY
Sbjct: 265 GDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITY 324

Query: 294 TSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE 353
            SLI  F + +    AF +L  ++  G  P++V ++ LID   K G   +A   +  ++ 
Sbjct: 325 NSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIR 384

Query: 354 LKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQ 410
           + L P+ +T+ SL+   C  G  +   KL   ++   V  ++V Y ALL   C+ G   +
Sbjct: 385 VGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMRE 444

Query: 411 AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ------------------- 451
           A +L+  +L  G+T +   +  L  G   A+ +++A+++ +                   
Sbjct: 445 AEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIW 504

Query: 452 GIVMNNP----------------AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
           G+   N                   N++++T ++D   + G+  +A+ L +        +
Sbjct: 505 GLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKI 564

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
            VV+Y V I GL + G  ++A   +  M    + PN   Y  ++   CK   ++  K L 
Sbjct: 565 TVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLF 624

Query: 556 QDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            +++D  I  D      L     K  +   A++    M  +G+  D
Sbjct: 625 NEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELD 670



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/357 (23%), Positives = 146/357 (40%), Gaps = 63/357 (17%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR      + G L + G  +  Q +      Y + +M    ++  +EM +          
Sbjct: 440 GRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNK---------- 489

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFY 217
                            K LK    P+ L +   +  LC+ N++ +   VI  M+  G  
Sbjct: 490 -----------------KNLK----PDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLT 528

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
            N  ++  L++ + K+G+  EA  LL  M  LG  ++V  + VLIDG  ++  +  A   
Sbjct: 529 ANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRY 588

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
           ++ M +NG  PN++ YT+LI G  +      A +  + +  +G +PD + +  LID   K
Sbjct: 589 FDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMK 648

Query: 338 MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNA 397
            G+  +AL + + ++E+ +                                E DL  Y +
Sbjct: 649 HGNPGEALSLRNRMVEIGM--------------------------------ELDLCAYTS 676

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           L+  F + G    A  L + ML KG  PD    + LLR       I+EA+ ++  + 
Sbjct: 677 LIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMA 733


>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
 gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 105/454 (23%), Positives = 210/454 (46%), Gaps = 8/454 (1%)

Query: 176 VLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGR 235
           +L++   P+  ++N  +   CK N + + K V+  M RKGF P+V    I++  FC  G+
Sbjct: 35  ILEKHGKPDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGK 94

Query: 236 IAEAYQLL-GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
           I  A ++   L+       ++  +T+LI+ +     +D A  L ++M+  G  P+  TY 
Sbjct: 95  IDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYN 154

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
            + +G  +      AF F+  L S G  PD++ +N+L+  L   G +D+       +   
Sbjct: 155 VITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSR 214

Query: 355 KLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQA 411
              P+  T+  L+S++C  G+      LV  ++ +    D   Y+ L++ FC+ G  + A
Sbjct: 215 GCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMA 274

Query: 412 VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
           ++  + M+  GF PD  ++  ++  LC     D A+ ++  +       N   +  ++  
Sbjct: 275 IEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSA 334

Query: 472 LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
           L  +G  ++A+ +  + + +    DV++Y   I  L   G  +EA  L + M      PN
Sbjct: 335 LWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPN 394

Query: 532 AYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLV 591
             +Y+ +LL  CK   I     +L  +I+   + +  T   L + I    S + A+    
Sbjct: 395 IVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMELAN 454

Query: 592 EMCNLGLIPDEMWRKLGLLSDETMTPVSLFDGFV 625
            +  +  I ++ +++L    ++T   + ++ GF+
Sbjct: 455 SLYIMNAISEDSFKRL----NKTFPLLDVYKGFI 484



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/411 (24%), Positives = 198/411 (48%), Gaps = 9/411 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV +++ +IS   +   R E+ + ++  + R G      T  + +  +       + L+ 
Sbjct: 43  DVFAYNAVISGFCK-ANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKV 101

Query: 142 FDEMGR-FGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLC 196
           F+E+ +     P      I+++     G +D  +K+L E       P+  ++N+    LC
Sbjct: 102 FEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLC 161

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
           K   V    + +  +  +G  P+V  + ILL      G+  E  + +  + + G   +V 
Sbjct: 162 KEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVV 221

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
            +++LI    R  +++ +  L + M + G +P+   Y  LI  F       +A  FLD +
Sbjct: 222 TYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCM 281

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG-R 375
             +G  PD+V +N ++  L K G+ D A++++  L E+   P+  ++ ++LS +  SG R
Sbjct: 282 ICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDR 341

Query: 376 FSLLPKLVCGLE--VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
           +  L  +   L   ++ D++ YN+L+S  C+ G  ++A+ L   ML   F P+  S+  +
Sbjct: 342 YRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTV 401

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           L GLC A +ID+AI V   ++ N    N   +T +++ +  +G   +A++L
Sbjct: 402 LLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMEL 452



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/361 (23%), Positives = 170/361 (47%), Gaps = 9/361 (2%)

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           MV K + P+V +   L+  F     I +A +++G++   G    V A+  +I GF +  R
Sbjct: 1   MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHGKP-DVFAYNAVISGFCKANR 59

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS-FLDMLESEGHAPDLVFHN 329
           ++ A  + ++M + G SP+VVT+  +I  F       +A   F ++L+     P L+ + 
Sbjct: 60  IESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYT 119

Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE-- 387
           +LI+     G  D+AL + D +L   L PD++T+  +   +C  G+     + V  L   
Sbjct: 120 ILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSR 179

Query: 388 -VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
             + D++ YN LL      G  ++  K  + +  +G  P+  ++  L+  LC   KI+E+
Sbjct: 180 GCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEES 239

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
           +N+ + +       +A+ +  ++      G+   AI+     I + +  D+V+Y   +  
Sbjct: 240 VNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAA 299

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE----RNIKMVKRLLQDVIDAR 562
           L + G  + A  ++ ++  +  PPN  +Y  ML +        R + M+ ++L   ID  
Sbjct: 300 LCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPD 359

Query: 563 I 563
           +
Sbjct: 360 V 360



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 87/386 (22%), Positives = 171/386 (44%), Gaps = 17/386 (4%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE-----TQLPNFLSFNIALCNLC 196
            D M R GF+P+    NI++      G++DL +KV +E        P  +++ I +    
Sbjct: 67  LDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYI 126

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
               +     ++  M+ +G  P+   + ++    CK G++  A++ +  + + G    V 
Sbjct: 127 LEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVI 186

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
            + +L+       + D       ++   GC PNVVTY+ LI           + + + ++
Sbjct: 187 TYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVM 246

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR- 375
           + +G  PD   ++ LI    + G  D A++  D ++    +PD   + ++++ +C +G  
Sbjct: 247 KEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNG 306

Query: 376 ------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
                 F  L ++ C   V +    YN +LS    +G   +A+ + + ML KG  PD  +
Sbjct: 307 DHAVEIFGKLDEVGCPPNVSS----YNTMLSALWSSGDRYRALGMISQMLSKGIDPDVIT 362

Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
           +  L+  LC    +DEAI +   ++      N   +  ++  L +A R   AI++    I
Sbjct: 363 YNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMI 422

Query: 490 VEKYPLDVVSYTVAIRGL-LEGGRTE 514
                 +  +YT+ I G+   G RT+
Sbjct: 423 ENGCQPNETTYTLLIEGIGFSGSRTQ 448



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/286 (20%), Positives = 121/286 (42%), Gaps = 5/286 (1%)

Query: 70  FIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIY 129
           F+     R    DV +++ ++  +    G+++     + E+   GC     T+ + +   
Sbjct: 172 FVRTLNSRGCKPDVITYNILLRALLN-QGKWDEGEKWMSEIFSRGCEPNVVTYSILISSL 230

Query: 130 WRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNF 185
            R       +     M   G TP+ +  + ++    + G++D+ I+ L     +  LP+ 
Sbjct: 231 CRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDI 290

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGL 245
           +++N  +  LCK  +  +  ++ G +   G  PNV  +  +L+     G    A  ++  
Sbjct: 291 VNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQ 350

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           M++ G    V  +  LI    R   +D A  L   M+     PN+V+Y +++ G  +A  
Sbjct: 351 MLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHR 410

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGL 351
              A   L  +   G  P+   + +LI+ +   GS   A+++ + L
Sbjct: 411 IDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMELANSL 456


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 120/486 (24%), Positives = 220/486 (45%), Gaps = 42/486 (8%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNL 195
           E ++ M   G  P     N ++D   K G+V   +++L + Q    LPN +++N+ +  L
Sbjct: 176 EVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGL 235

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
               ++   K++I  M+R G   +   ++ L+  +C+ G++ EA +L   M++ G   ++
Sbjct: 236 SHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTL 295

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
             +  ++ G  +  R+  A  L + MV     P++V+Y +LI G+        AF     
Sbjct: 296 VTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAE 355

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
           L   G  P +V +N LID L +MG  D A+ + D +++    PD +TF  L+   C  G 
Sbjct: 356 LRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGN 415

Query: 376 FSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
             +  +L   +    ++ D   Y   +    K G P++A  +   ML +GF PD  ++  
Sbjct: 416 LPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNV 475

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
            + GL     + EA  + + ++ N    +   +T+I+   + AG   KA  +F   + + 
Sbjct: 476 FIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKG 535

Query: 493 YPLDVVSYTV-----AIRGLL-----------EGG-------------------RTEEAY 517
               VV+YTV     A+RG L           E G                   + ++AY
Sbjct: 536 IFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAY 595

Query: 518 ILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFI 577
             +++M+   + PN YTY +++   C   + +   RL +D++D  I+ D  T   L K +
Sbjct: 596 KFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHL 655

Query: 578 FKFHSS 583
            K + S
Sbjct: 656 NKDYKS 661



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 105/420 (25%), Positives = 197/420 (46%), Gaps = 11/420 (2%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           +G  E  + ++ E+ R+G  + A T+   +R Y             +EM   G  P    
Sbjct: 238 SGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVT 297

Query: 157 RNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N +M  L K GRV    K+L     +  +P+ +S+N  +    +L ++     +   + 
Sbjct: 298 YNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELR 357

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
            +G  P+V  +  L++  C+MG +  A +L   MI  G    V  +T+L+ GF +L  L 
Sbjct: 358 FRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLP 417

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
           MA  L+++M+  G  P+   Y + I G ++    S AF   + + + G  PDL+ +NV I
Sbjct: 418 MAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFI 477

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG-----RFSLLPKLVCGLE 387
           D L K+G+  +A ++   +L   LVPD  T+ S++    ++G     R   L  L  G  
Sbjct: 478 DGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKG-- 535

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
           +   +V Y  L+  +   G    A+  +  M +KG  P+  ++  L+ GLC  RK+D+A 
Sbjct: 536 IFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAY 595

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
             +  +     + N + +T +++     G   +A++L++  +  +   D  +++  ++ L
Sbjct: 596 KFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHL 655


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 127/481 (26%), Positives = 207/481 (43%), Gaps = 16/481 (3%)

Query: 102 TVRGIVGELARVGCVIKAQTFLLF---LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           T R I  ELA     + A+T L+F   +R Y   +     LE F  +   GF PN    N
Sbjct: 126 TNRTIFDELALARDRVDAKTTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCN 185

Query: 159 IVMDVLFKIGRVDLGIKVLKETQLPNFLS----FNIALCNLCKLNDVSNVKDVIGMMVRK 214
            ++ +  K+ R  +   +  E    N  S    FNI +  LCK   +   K+ IG M   
Sbjct: 186 QMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETL 245

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           G  PNV  +  +++  C  G+   A  +   M   G       +   I G  +  RL+ A
Sbjct: 246 GVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEA 305

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             L  KM++ G  PN VTY +LI G+        A+++ D + S+G    LV +N+ I  
Sbjct: 306 SGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHA 365

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEA 390
           L   G   DA ++   + E  ++PD+ T   L++  C  G     F LL ++V G  ++ 
Sbjct: 366 LFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMV-GKGIQP 424

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
            LV Y +L+    K     +A  L++ +  +G  PD   F  L+ G C    ID A  + 
Sbjct: 425 TLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLL 484

Query: 451 QGIVMNNPAV--NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           +   M+N  V  +   +  ++      G+  +A QL           D +SY   I G  
Sbjct: 485 KE--MDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYS 542

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
           + G  ++A+ +  +M      P   TY  ++   CK +  +  + LL++++   I  D  
Sbjct: 543 KRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDS 602

Query: 569 T 569
           T
Sbjct: 603 T 603



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/395 (22%), Positives = 179/395 (45%), Gaps = 8/395 (2%)

Query: 85  SFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDE 144
           +F+ MI+V+ +  G+ +  +  +G +  +G      T+   +  +     +      F  
Sbjct: 218 TFNIMINVLCK-EGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQT 276

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCKLND 200
           M   G  P+ +  N  +  L K GR++    L  K+L+   +PN +++N  +   C   D
Sbjct: 277 MKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGD 336

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
           +         M+ KG   ++  + + ++     GR+ +A  ++  M   G         +
Sbjct: 337 LDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNI 396

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           LI+G+ R      A  L ++MV  G  P +VTYTSLI    +      A +    ++ EG
Sbjct: 397 LINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEG 456

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
             PD++  N LID     G+ D A  +   +  +K++PD  T+ +L+   C  G+     
Sbjct: 457 LLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEAR 516

Query: 381 KLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
           +L+  ++   ++ D + YN L+S + K G    A ++ + M+  GF P   ++  L++GL
Sbjct: 517 QLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGL 576

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
           C  ++ + A  + + +V      +   + +I++ +
Sbjct: 577 CKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAM 611



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/386 (22%), Positives = 172/386 (44%), Gaps = 5/386 (1%)

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
           +F++L+  +C++ +  EA +   L+   G   ++     ++  F +L R  MA  L+ +M
Sbjct: 148 IFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEM 207

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
            +     ++ T+  +I    +      A  F+  +E+ G  P++V +N +I      G +
Sbjct: 208 FRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKF 267

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLV----VYNA 397
             A  ++  + +  L PD YT+ S +S +C  GR      L+C + +E  LV     YNA
Sbjct: 268 QRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKM-LEGGLVPNAVTYNA 326

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
           L+  +C  G  ++A    + M+ KG      ++   +  L    ++ +A N+ + +    
Sbjct: 327 LIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKG 386

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAY 517
              +A  H  +++     G   +A  L    + +     +V+YT  I  L +  R +EA 
Sbjct: 387 MMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEAD 446

Query: 518 ILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFI 577
            L+S+++   + P+   +  ++   C   NI    +LL+++ + ++  D  T   L +  
Sbjct: 447 ALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGY 506

Query: 578 FKFHSSSSAVNQLVEMCNLGLIPDEM 603
            +      A   L EM   G+ PD +
Sbjct: 507 CREGKVEEARQLLDEMKRRGIKPDHI 532



 Score = 44.7 bits (104), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 29/133 (21%), Positives = 57/133 (42%), Gaps = 4/133 (3%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLN 199
           EM      P+    N +M    + G+V+   ++L E +     P+ +S+N  +    K  
Sbjct: 486 EMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRG 545

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
           D+ +   V   M+  GF P +  +  L+   CK      A +LL  M++ G +   + + 
Sbjct: 546 DMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYL 605

Query: 260 VLIDGFRRLRRLD 272
            +I+    +  L+
Sbjct: 606 SIIEAMETVDDLE 618


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 122/516 (23%), Positives = 231/516 (44%), Gaps = 19/516 (3%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           R E V  +V   +  G       F L +R + +        EAF  +   G+T +  A N
Sbjct: 137 RVEIVNSLVSTYSNCGS--NDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACN 194

Query: 159 IVMDVLFKIGRVDLGIKVLKETQLP----NFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
            ++  L +IG V+L  ++ +E        N  + NI +  LCK   +  V   +  +  K
Sbjct: 195 ALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEK 254

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           G YP++  +  L++ +   G + EA++L+  M + G S  V  +  +I+G  +  + + A
Sbjct: 255 GVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERA 314

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS----FLDMLESEGHAPDLVFHNV 330
             ++ +M+++G SP+  TY SL+   MEA     A      F DM  S    PDLV  + 
Sbjct: 315 KEVFAEMLRSGLSPDSTTYRSLL---MEACKKGDAVETENIFSDM-RSRDVVPDLVCFSS 370

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA 390
           ++   ++ G+ D AL  ++ + E  L+PD+  +  L+   C  G  S    L   +  + 
Sbjct: 371 MMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQG 430

Query: 391 ---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
              D+V YN +L   CK     +A KL+N M ++G  PD+Y+   L+ G C    +  A+
Sbjct: 431 CAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAM 490

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            +++ +      ++   +  ++D   + G    A +++   + ++     +S+++ +  L
Sbjct: 491 ELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNAL 550

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
              G   EA+ ++ +M   ++ P       M+  +C+  N    +  L+ +I      D 
Sbjct: 551 CSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDC 610

Query: 568 HTSIRLTKFIFKFHSSSSAVN--QLVEMCNLGLIPD 601
            +   L     K  + S A    + +E    GL+PD
Sbjct: 611 ISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPD 646



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 121/539 (22%), Positives = 224/539 (41%), Gaps = 10/539 (1%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           + + Y   + + + +I  + R+ G  E    I  E++R G  +   T  + +    +   
Sbjct: 182 RSKGYTVSIDACNALIGSLVRI-GWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGK 240

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNI 190
              V     E+   G  P+    N ++      G ++   +++         P   ++N 
Sbjct: 241 MEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNT 300

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +  LCK       K+V   M+R G  P+   +  LL   CK G   E   +   M +  
Sbjct: 301 VINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRD 360

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
               +  ++ ++  F R   LD A   +  + + G  P+ V YT LI+G+    M S A 
Sbjct: 361 VVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAM 420

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
           +  + +  +G A D+V +N ++  L K     +A  +++ + E  L PDSYT   L+   
Sbjct: 421 NLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGH 480

Query: 371 CLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           C  G      +L   ++   ++ D+V YN LL  F K G  + A +++  M+ K   P  
Sbjct: 481 CKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTP 540

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
            SF  L+  LC    + EA  V+  ++  +      +  +++     +G          +
Sbjct: 541 ISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEK 600

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM--KHIAVPPNAYTYRVMLLSFCKE 545
            I E +  D +SY   I G ++     +A+ L  +M  K   + P+ +TY  +L  FC+E
Sbjct: 601 MISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRE 660

Query: 546 RNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMW 604
             +K  + +L+ +I+  +  D  T   L        + + A     EM   G  PD+ +
Sbjct: 661 NQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPDDKF 719


>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 1 [Brachypodium distachyon]
 gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 2 [Brachypodium distachyon]
          Length = 704

 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 108/446 (24%), Positives = 205/446 (45%), Gaps = 45/446 (10%)

Query: 149 GFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNV 204
           G +PN    N+++D L K+G      D+  +++     P+ +++   +  LC+  DV + 
Sbjct: 260 GASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSA 319

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
             V   M++ G  P+V ++  LL  FC  GR+ EA++    M   G   +V ++ +++ G
Sbjct: 320 ARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSYNIMLKG 378

Query: 265 FRRLRRLDMAGYLWEKMVQNGC-SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP 323
                 +D A  LWE + ++   SP++VT++++I G  E    + +   L+   + G   
Sbjct: 379 LFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKEL 438

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV 383
           D   ++ +I  L K G  DDA+ +Y+ +      P+S+ + +L++  C + +FS   ++ 
Sbjct: 439 DEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVY 498

Query: 384 CGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
             +   +     + YN L+   CKA    +A +    ML+KG   D  ++  L+RGLC  
Sbjct: 499 SQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRD 558

Query: 441 RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR------------- 487
           +KID A+ ++  I+      +  +H  ++  L  AG+  +A QL                
Sbjct: 559 KKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVT 618

Query: 488 ----------------------AIVEKYPL-DVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
                                 AI+E   + D++SY   I+GL    RT E   L ++M 
Sbjct: 619 YNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEML 678

Query: 525 HIAVPPNAYTYRVMLLSFCKERNIKM 550
              + P A T+ +++ +  K   I++
Sbjct: 679 ASGIIPTAITWNILVRAVIKYGPIQI 704



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 107/492 (21%), Positives = 203/492 (41%), Gaps = 48/492 (9%)

Query: 123 LLFLRIYWRGEMYGMVLEAFDEMGRF-GFTPNTFARNIVMDVLFKIGR--------VDLG 173
           L+ L  + R  M    L AF  +  F G  P   + N ++D   +  R          L 
Sbjct: 88  LVVLSAFSRALMPDAALAAFRRLPSFLGCNPGVRSHNALLDAFVRARRFSDADAFFASLS 147

Query: 174 IKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKM 233
                    PN  ++NI L +LC   D+     +   +  +G  P+   +  L++ F K 
Sbjct: 148 HGAFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKN 207

Query: 234 GRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN-GCSPNVVT 292
            R+  A  LL  M +         +  L+ G  R    + A  +WE++V++ G SPN+ T
Sbjct: 208 NRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLAT 267

Query: 293 YTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
           Y  ++ G  +  MF  A    + + +  H PD++ +  +I  L +    D A  VY  ++
Sbjct: 268 YNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMI 327

Query: 353 ELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---------------------- 390
           +  LVPD   + SLL   C +GR     K    + V                        
Sbjct: 328 KTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIRNVTSYNIMLKGLFDGGMVDK 387

Query: 391 ----------------DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
                           D+V ++ ++   C+ GF N+++++       G   D +S+  ++
Sbjct: 388 ATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMI 447

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            GLC   ++D+A+ +Y+ I M++   N+H++ A+++   +A +   AI+++ +       
Sbjct: 448 SGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCS 507

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
              ++Y   I GL +  +  EA     +M       +  TY  ++   C+++ I     L
Sbjct: 508 PTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALAL 567

Query: 555 LQDVIDARIELD 566
              ++D  ++ D
Sbjct: 568 WNQILDKGLQTD 579



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 113/473 (23%), Positives = 218/473 (46%), Gaps = 19/473 (4%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE-----TQLPNFLSFNIALCNLC 196
            DEM  +   P+    N ++   F+ G  +  ++V ++        PN  ++N+ L  LC
Sbjct: 217 LDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLC 276

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
           KL       DV   MV     P++  +  +++  C+   +  A ++   MI  G    V 
Sbjct: 277 KLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVV 336

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
            +  L+ GF    R+  A   W+ M  +G   NV +Y  ++KG  +  M   A    ++L
Sbjct: 337 IYNSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSYNIMLKGLFDGGMVDKATDLWELL 395

Query: 317 ESEGH-APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
           E +   +PD+V  + +I  L + G  + +L + +         D +++ S++S +C  GR
Sbjct: 396 EKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGR 455

Query: 376 FSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
                KL   + +++   +  +YNAL++ FC+A   + A+++Y+ M +   +P   ++  
Sbjct: 456 LDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNT 515

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           L+ GLC A K  EA    + ++     ++ + + +++  L    +   A+ L+ + + + 
Sbjct: 516 LIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKG 575

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI-AVPPNAYTYRVMLLSF----CKERN 547
              DVV + + I GL   G+ +EA  L S+MK      PN  TY  ++  F    C ++ 
Sbjct: 576 LQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKA 635

Query: 548 IKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
             +   +L++ +   I + Y+T I   K +   + +   V  L EM   G+IP
Sbjct: 636 ASLWMAILENGLVPDI-ISYNTRI---KGLCSCNRTPEGVQLLNEMLASGIIP 684



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 112/451 (24%), Positives = 208/451 (46%), Gaps = 16/451 (3%)

Query: 120 QTFLLFLR-IYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK 178
           QT+ + LR +  RG++    +  FD +   G  P+    + +M    K  R+D  + +L 
Sbjct: 160 QTYNIMLRSLCVRGDL-DRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLD 218

Query: 179 ETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK-GFYPNVRMFEILLNCFCKM 233
           E       P+ + +N  L    +  +      V   +VR  G  PN+  + ++L+  CK+
Sbjct: 219 EMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKL 278

Query: 234 GRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTY 293
           G   EA  +   M+       +  +  +I G  R   +D A  ++ +M++ G  P+VV Y
Sbjct: 279 GMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIY 338

Query: 294 TSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE 353
            SL+KGF  A     A+ F D +   G   ++  +N+++  L   G  D A D+++ LLE
Sbjct: 339 NSLLKGFCHAGRVGEAWKFWDSMSVSG-IRNVTSYNIMLKGLFDGGMVDKATDLWE-LLE 396

Query: 354 L--KLVPDSYTFCSLLSTVCLSG----RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGF 407
               L PD  TF +++  +C  G       +L +     + E D   Y++++S  CK G 
Sbjct: 397 KDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGK-ELDEFSYSSMISGLCKDGR 455

Query: 408 PNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTA 467
            + AVKLY  +    F P+++ +  L+ G C A K  +AI VY  +  N+ +     +  
Sbjct: 456 LDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNT 515

Query: 468 IVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIA 527
           ++  L +A +  +A +  R  + +   LDV +Y   IRGL    + + A  L++Q+    
Sbjct: 516 LIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKG 575

Query: 528 VPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           +  +   + +++   C    +    +LL ++
Sbjct: 576 LQTDVVMHNILIHGLCSAGKVDEASQLLSEM 606



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 87/404 (21%), Positives = 179/404 (44%), Gaps = 11/404 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D+ ++  MI  + R T      R +  E+ + G V     +   L+ +      G   + 
Sbjct: 299 DMITYGTMIHGLCRSTDVDSAAR-VYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKF 357

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK-----ETQLPNFLSFNIALCNLC 196
           +D M   G   N  + NI++  LF  G VD    + +     ++  P+ ++F+  +  LC
Sbjct: 358 WDSMSVSGIR-NVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLC 416

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
           +    +    ++      G   +   +  +++  CK GR+ +A +L   +       + +
Sbjct: 417 EKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSH 476

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
            +  LI+GF +  +   A  ++ +M +N CSP  +TY +LI G  +A+ +  A  F   +
Sbjct: 477 IYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREM 536

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
             +G   D+  +  LI  L +    D AL +++ +L+  L  D      L+  +C +G+ 
Sbjct: 537 LEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKV 596

Query: 377 SLLPKLVCGLEVE----ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
               +L+  ++ +     ++V YN L+  F + G  ++A  L+  +L+ G  PD  S+  
Sbjct: 597 DEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNT 656

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
            ++GLC   +  E + +   ++ +     A     +V  +I+ G
Sbjct: 657 RIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIKYG 700



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 149/312 (47%), Gaps = 16/312 (5%)

Query: 241 QLLGLMITLG--TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN-GCSPNVVTYTSLI 297
           +LLG++  L      S +A  V++  F R    D A   + ++    GC+P V ++ +L+
Sbjct: 68  RLLGILPRLRHRPRFSESAALVVLSAFSRALMPDAALAAFRRLPSFLGCNPGVRSHNALL 127

Query: 298 KGFMEAKMFSIAFSFLDMLESEGH-----APDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
             F+ A+ FS A +F   L S G      AP+L  +N+++  L   G  D A+ ++D L 
Sbjct: 128 DAFVRARRFSDADAFFASL-SHGAFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLR 186

Query: 353 ELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLVCGLEVEADLVVYNALLSYFCKAGFP 408
              L PD  T+ +L+S    + R      LL ++    EV+ D V YNALL    + G  
Sbjct: 187 CRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMP-SYEVQPDAVCYNALLGGCFRNGEF 245

Query: 409 NQAVKLYNTML-DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTA 467
            +A++++  ++ D G +P+  ++  +L GLC      EA +V++ +V NN   +   +  
Sbjct: 246 EKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGT 305

Query: 468 IVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIA 527
           ++  L  +     A +++   I      DVV Y   ++G    GR  EA+  +  M    
Sbjct: 306 MIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSG 365

Query: 528 VPPNAYTYRVML 539
           +  N  +Y +ML
Sbjct: 366 I-RNVTSYNIML 376


>gi|15239161|ref|NP_201383.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170571|sp|Q9FH87.1|PP447_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g65820
 gi|9758569|dbj|BAB09050.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010728|gb|AED98111.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 119/526 (22%), Positives = 243/526 (46%), Gaps = 51/526 (9%)

Query: 46  IILAPHIVHSTLLNC-PSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVR 104
           + L P ++   L  C  +  +   FF+W AKQ  Y H ++ +  M+ +++++  +F  V 
Sbjct: 109 VELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMR-QFGAVW 167

Query: 105 GIVGELARVG-CVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDV 163
           G++ E+ +    +I+ + F++ ++ +   +M    +E  DEM +FGF P+ +    ++D 
Sbjct: 168 GLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDA 227

Query: 164 LFKIGRVDLGIKVLKETQLP---NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV 220
           L K G V    K+ ++ ++    N   F   L   C++  +   K V+  M   GF P++
Sbjct: 228 LCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDI 287

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
             +  LL+ +   G++A+AY LL  M   G   + N +TVLI    ++ R++ A  ++ +
Sbjct: 288 VDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVE 347

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP-DLVFHNVLIDCLSKMG 339
           M +  C  +VVTYT+L+ GF +       +  LD +  +G  P +L + ++++    K  
Sbjct: 348 MERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMV-AHEKKE 406

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALL 399
           S+++ L++ + + +++  P                                D+ +YN ++
Sbjct: 407 SFEECLELMEKMRQIEYHP--------------------------------DIGIYNVVI 434

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN-- 457
              CK G   +AV+L+N M + G +P   +FV ++ GL     + EA + ++ +V     
Sbjct: 435 RLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLF 494

Query: 458 -----PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
                  +   ++T + D+ +E  +   +    + A      L+V+S+T+ I  L   G 
Sbjct: 495 SVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGAC----ELNVLSWTIWIHALFSKGY 550

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
            +EA     +M  +   P   T+  ++    K  N +    + + V
Sbjct: 551 EKEACSYCIEMIEMDFMPQPDTFAKLMKGLKKLYNREFAGEITEKV 596



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 3/216 (1%)

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
           +E +L V   L+  F  A    +A+++ + M   GF PD Y F  LL  LC    + +A 
Sbjct: 181 IEPELFV--VLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAA 238

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            +++ + M  P VN    T+++      G+  +A  +  +     +  D+V YT  + G 
Sbjct: 239 KLFEDMRMRFP-VNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGY 297

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
              G+  +AY L   M+     PNA  Y V++ + CK   ++   ++  ++     E D 
Sbjct: 298 ANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADV 357

Query: 568 HTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
            T   L     K+         L +M   GL+P E+
Sbjct: 358 VTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSEL 393


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 111/458 (24%), Positives = 210/458 (45%), Gaps = 9/458 (1%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDV 207
           PN +  N ++      G+    ++V KE +    LP+ ++ ++ + +LCK   +   +DV
Sbjct: 300 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 359

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
              M  KG  P+V  + I+LN +   G + +   L  LM+  G +     + VLI  +  
Sbjct: 360 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYAN 419

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
              LD A  ++ +M  +G  P+VVTY ++I           A    + +  +G APD   
Sbjct: 420 CGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 479

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF---SLLPKLVC 384
           +N LI      GS   A ++   ++   +  D   F S+++ +C  GR      +  L  
Sbjct: 480 YNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTV 539

Query: 385 GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
            + +  D VVY+ L+  +C  G   +A+++++ M+  G  P+   +  L+ G C   +ID
Sbjct: 540 NVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRID 599

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
           E +++++ ++      +  +++ I+D L +AGR   A   F         +D+ +Y + +
Sbjct: 600 EGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVL 659

Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
           RGL +    +EA  L+ +++ + V  N  T   M+    + R ++  K L   +  +R+ 
Sbjct: 660 RGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLV 719

Query: 565 LDYHT-SIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            +  T SI +T  I K      A +    M N G  P+
Sbjct: 720 PNVVTYSIMITNLI-KEGLVEEAEDMFSSMQNAGCEPN 756



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 114/504 (22%), Positives = 214/504 (42%), Gaps = 45/504 (8%)

Query: 129 YWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPN 184
           Y     +   +  F EM R    P+    +++M  L K G++     V      + Q P+
Sbjct: 312 YSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPD 371

Query: 185 FLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLG 244
             S+NI L        + ++ D+  +M+  G  P+   F +L+  +   G + +A  +  
Sbjct: 372 VFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFN 431

Query: 245 LMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
            M   G    V  +  +I    R+ ++D A   + +M+  G +P+   Y  LI+GF    
Sbjct: 432 EMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHG 491

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
               A   +  + + G   D+VF + +I+ L K+G   DA +++D  + + L PD+  + 
Sbjct: 492 SLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYS 551

Query: 365 SLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
            L+   CL G+     ++   +    +E ++VVY  L++ +CK G  ++ + L+  ML +
Sbjct: 552 MLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQR 611

Query: 422 GFTPDN--YSFV--GL-------------------------------LRGLCGARKIDEA 446
           G  P    YS +  GL                               LRGL   R  DEA
Sbjct: 612 GIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEA 671

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
           I +++ +   N  +N      ++D + +  R  +A  LF      +   +VV+Y++ I  
Sbjct: 672 IFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITN 731

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           L++ G  EEA  ++S M++    PN+     ++    K+  I      L  + +    L+
Sbjct: 732 LIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLE 791

Query: 567 YHTSIRLTKFIFKFHSSSSAVNQL 590
           + T++ L      F S  +   Q+
Sbjct: 792 HLTAMLLVDL---FSSKGTCREQI 812



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 109/533 (20%), Positives = 220/533 (41%), Gaps = 44/533 (8%)

Query: 113 VGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGF--TPNTFARNIVMDVLFKIGRV 170
           +GCV    ++ + L+        G   +    M   G   +PN  A N V+D  FK G V
Sbjct: 189 LGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDV 248

Query: 171 DLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEIL 226
           +    + KE       P+ +++N  +  LCK   +   +  +  MV K   PN   +  L
Sbjct: 249 NKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNL 308

Query: 227 LNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGC 286
           +  +   G+  EA ++   M        V   ++L+    +  ++  A  +++ M   G 
Sbjct: 309 IYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQ 368

Query: 287 SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI----DC-------- 334
           +P+V +Y  ++ G+             D++  +G APD    NVLI    +C        
Sbjct: 369 NPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMI 428

Query: 335 -----------------------LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
                                  L ++G  DDA++ ++ +++  + PD Y +  L+   C
Sbjct: 429 IFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFC 488

Query: 372 LSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
             G      +L+  +    +  D+V ++++++  CK G    A  +++  ++ G  PD  
Sbjct: 489 THGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAV 548

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
            +  L+ G C   K+++A+ V+  +V      N  V+  +V+   + GR  + + LFR  
Sbjct: 549 VYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREM 608

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
           +        + Y++ I GL + GRT  A + + +M    +  +  TY ++L    K R  
Sbjct: 609 LQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCF 668

Query: 549 KMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
                L +++    ++++  T   +   +F+      A +    +    L+P+
Sbjct: 669 DEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPN 721



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/425 (21%), Positives = 175/425 (41%), Gaps = 41/425 (9%)

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD----- 272
           P    + IL++C  +  R   A    G ++  G  +++     L++GF   +R D     
Sbjct: 122 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 181

Query: 273 -------------------------------MAGYLWEKMVQNG--CSPNVVTYTSLIKG 299
                                           A  L   M + G  CSPNVV Y ++I G
Sbjct: 182 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDG 241

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
           F +    + A      +   G  PDLV +N ++  L K  + D A      ++  +++P+
Sbjct: 242 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 301

Query: 360 SYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYN 416
           ++T+ +L+     +G++    ++   +   +   D+V  + L+   CK G   +A  +++
Sbjct: 302 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 361

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
           TM  KG  PD +S+  +L G      + +  +++  ++ +  A + +    ++      G
Sbjct: 362 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCG 421

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
              KA+ +F          DVV+Y   I  L   G+ ++A   ++QM    V P+ Y Y 
Sbjct: 422 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYN 481

Query: 537 VMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNL 596
            ++  FC   ++   K L+ ++++  + LD      +   + K      A N      N+
Sbjct: 482 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNV 541

Query: 597 GLIPD 601
           GL PD
Sbjct: 542 GLHPD 546



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/321 (23%), Positives = 142/321 (44%), Gaps = 6/321 (1%)

Query: 287 SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALD 346
           SP   TY  L+     A    +A +F   L   G   +++  N L++   +    D+ALD
Sbjct: 121 SPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALD 180

Query: 347 V-YDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV-----CGLEVEADLVVYNALLS 400
           +      EL  VPD +++  LL ++C  G+      L+      G     ++V YN ++ 
Sbjct: 181 ILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVID 240

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
            F K G  N+A  L+  M+ +G  PD  ++  ++  LC AR +D+A    + +V      
Sbjct: 241 GFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLP 300

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
           N   +  ++      G+  +A+++F+         DVV+ ++ +  L + G+ +EA  ++
Sbjct: 301 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVF 360

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKF 580
             M      P+ ++Y +ML  +  +  +  +  L   ++   I  D++T   L K     
Sbjct: 361 DTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANC 420

Query: 581 HSSSSAVNQLVEMCNLGLIPD 601
                A+    EM + G+ PD
Sbjct: 421 GMLDKAMIIFNEMRDHGVKPD 441



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/279 (19%), Positives = 112/279 (40%), Gaps = 32/279 (11%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D+  F  +I+ + +L GR    + I      VG    A  + + +  Y         L  
Sbjct: 511 DIVFFSSIINNLCKL-GRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRV 569

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDV 201
           FD M   G  PN      +++   KIGR+D G+ + +E                      
Sbjct: 570 FDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFRE---------------------- 607

Query: 202 SNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVL 261
                    M+++G  P+  ++ I+++   + GR   A      M   G ++ +  + ++
Sbjct: 608 ---------MLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIV 658

Query: 262 IDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH 321
           + G  + R  D A +L++++       N++T  ++I G  + +    A      +     
Sbjct: 659 LRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRL 718

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
            P++V ++++I  L K G  ++A D++  +      P+S
Sbjct: 719 VPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNS 757



 Score = 45.1 bits (105), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 39/173 (22%), Positives = 69/173 (39%), Gaps = 4/173 (2%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
            GR    +    E+   G  +   T+ + LR  ++   +   +  F E+       N   
Sbjct: 630 AGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIIT 689

Query: 157 RNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N ++D +F+  RV    DL   + +   +PN ++++I + NL K   V   +D+   M 
Sbjct: 690 LNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQ 749

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF 265
             G  PN R+   ++    K   I  A   L  +     SL      +L+D F
Sbjct: 750 NAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLF 802


>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 897

 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 124/514 (24%), Positives = 215/514 (41%), Gaps = 52/514 (10%)

Query: 100 FETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF---DEMGRFGFTPNTFA 156
           F+  + +  E+ R  C +   T+ + +    R    G V EAF   +EM  +G +P+ F 
Sbjct: 261 FDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRS---GAVEEAFGFKEEMVDYGLSPDAFT 317

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
              +M+ L K GR+     +L E       PN + +   +    K    +   D++  M+
Sbjct: 318 YGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMI 377

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG---------------------- 250
             G  PN  M++ L+   CK+G++  A +LL  MI +G                      
Sbjct: 378 SAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKD 437

Query: 251 -----------TSLSVNAWT--VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLI 297
                      + +  NA+T  ++I+G  +      AG L E+M+  G  PN   Y  LI
Sbjct: 438 GAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLI 497

Query: 298 KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
            G  +    S+A   L+ +      PDL  +N LI  LS +G  ++A + Y  + +  LV
Sbjct: 498 IGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLV 557

Query: 358 PDSYTFCSLLSTVCLSGRFSLLPKLV-----CGLEVEADLVVYNALLSYFCKAGFPNQAV 412
           PD +T+  L+   C +       +L+      GL+  AD   Y  LL  + K+    +  
Sbjct: 558 PDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNAD--TYTDLLEGYFKSNDHEKVS 615

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
            +  +ML  G  PDN+ +  ++R L  +  ++ A  V   +  N    + H++++++  L
Sbjct: 616 SILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGL 675

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
            +     KA+ L      E     +V Y   I G    G    A  ++  +    + PN 
Sbjct: 676 CKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNC 735

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
            TY  ++   CK  +I     L +D++D  I  D
Sbjct: 736 VTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPD 769



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 120/510 (23%), Positives = 220/510 (43%), Gaps = 64/510 (12%)

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIA 191
           G   +  +EM + G  P+TF  + +M   F+    D   ++L E +    LPN  ++ I 
Sbjct: 402 GRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIM 461

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMF--------------------------EI 225
           +  LC+  +     +++  M+ +G  PN  M+                           +
Sbjct: 462 INGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANV 521

Query: 226 LLNCFC---------KMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
           L + FC          +GRI EA +    +   G       ++ LI G+ + R L+ A  
Sbjct: 522 LPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQ 581

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           L ++M+ +G  PN  TYT L++G+ ++       S L  +   G  PD   + ++I  LS
Sbjct: 582 LLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLS 641

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE------VEA 390
           +  + + A  V   + +  LVPD + + SL+S +C   + + + K V  L+      +E 
Sbjct: 642 RSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLC---KMADMEKAVGLLDEMAKEGLEP 698

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
            +V YNAL+  FC++G  ++A  +++++L KG  P+  ++  L+ G C    I +A ++Y
Sbjct: 699 GIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLY 758

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
           + ++    A +A V+  +     +A    +A+ L        Y   V  ++  +RG  + 
Sbjct: 759 KDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA-HVSLFSTLVRGFCKR 817

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
           GR +E   L   M    + PNA T   ++  F K   +    R+      A ++    + 
Sbjct: 818 GRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVF-----AELQQKKASQ 872

Query: 571 IRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
               +F   F           +M N GLIP
Sbjct: 873 SSTDRFSLLF----------TDMINKGLIP 892



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 122/513 (23%), Positives = 224/513 (43%), Gaps = 36/513 (7%)

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDL--GIKVLKETQ--LPNFLSFNIALCNLCKLND 200
           MG  G  P     N ++  L +   ++L   +K   E     P+  +++  L   CK  D
Sbjct: 201 MGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARD 260

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
               K V   M R+    N   + ++++  C+ G + EA+     M+  G S     +  
Sbjct: 261 FDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGA 320

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           L++G  +  RL  A  L ++M  +G  PNVV Y +L+ GFM+    + AF  L+ + S G
Sbjct: 321 LMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAG 380

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST----VCLSGRF 376
             P+ + ++ LI  L K+G    A  + + ++++   PD++T+  L+          G F
Sbjct: 381 VQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAF 440

Query: 377 SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
            LL ++     +  +   Y  +++  C+ G   +A  L   M+ +G  P+ + +  L+ G
Sbjct: 441 ELLNEMR-NSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIG 499

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL- 495
                 I  A    + +   N   +   + +++  L   GR  +A + +  A V+K  L 
Sbjct: 500 HSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYY--AQVQKRGLV 557

Query: 496 -DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
            D  +Y+  I G  +    E+A  L  QM +  + PNA TY  +L  + K  + + V  +
Sbjct: 558 PDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSI 617

Query: 555 LQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD------------- 601
           LQ ++ +  + D H    + + + +  +   A   L E+   GL+PD             
Sbjct: 618 LQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCK 677

Query: 602 --EMWRKLGLLSD---ETMTP-----VSLFDGF 624
             +M + +GLL +   E + P      +L DGF
Sbjct: 678 MADMEKAVGLLDEMAKEGLEPGIVCYNALIDGF 710



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 120/580 (20%), Positives = 238/580 (41%), Gaps = 52/580 (8%)

Query: 33  SPKVCATTHQDFPIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISV 92
           +  +CA +H  FP   A  ++H  +L  P   + L+      +  D      S  H  +V
Sbjct: 122 AASLCAASH--FP--QANGLLHQMILAHPHPPLVLASIQRAIQDSDARSPSPSPSHSTAV 177

Query: 93  VTRL------TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMG 146
           +  L       G   T   +V  +  +G     +     L+   R +   +V +    M 
Sbjct: 178 LDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFME 237

Query: 147 RFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVS 202
             G  P+ +  +  ++   K    D   KV +E +      N +++N+ +  LC+   V 
Sbjct: 238 GAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVE 297

Query: 203 NVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLI 262
                   MV  G  P+   +  L+N  CK GR+ EA  LL  M   G   +V  +  L+
Sbjct: 298 EAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLV 357

Query: 263 DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
           DGF +  +   A  +  +M+  G  PN + Y +LI+G  +      A   L+ +   GH 
Sbjct: 358 DGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHR 417

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF----SL 378
           PD   ++ L+    +    D A ++ + +    ++P++YT+  +++ +C +G      +L
Sbjct: 418 PDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNL 477

Query: 379 LPKLVC-GLEVEA---------------------------------DLVVYNALLSYFCK 404
           L +++  GL+  A                                 DL  YN+L+     
Sbjct: 478 LEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLST 537

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV 464
            G   +A + Y  +  +G  PD +++ GL+ G C  R +++A  + Q ++ +    NA  
Sbjct: 538 VGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADT 597

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
           +T +++   ++    K   + +  +      D   Y + IR L      E A+++ ++++
Sbjct: 598 YTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVE 657

Query: 525 HIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
              + P+ + Y  ++   CK  +++    LL ++    +E
Sbjct: 658 KNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLE 697



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/385 (22%), Positives = 176/385 (45%), Gaps = 5/385 (1%)

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
           + ++L++ + K G +  A Q++ +M  LG + +      L+    R   +++   L   M
Sbjct: 177 VLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFM 236

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
              G  P+V TY++ ++   +A+ F  A    + +     A + V +NV+I  L + G+ 
Sbjct: 237 EGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAV 296

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF----SLLPKLVCGLEVEADLVVYNA 397
           ++A    + +++  L PD++T+ +L++ +C  GR     +LL ++ C   ++ ++VVY  
Sbjct: 297 EEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCS-GLKPNVVVYAT 355

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
           L+  F K G   +A  + N M+  G  P+   +  L+RGLC   ++  A  +   ++   
Sbjct: 356 LVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVG 415

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAY 517
              +   +  ++    +      A +L           +  +Y + I GL + G ++EA 
Sbjct: 416 HRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAG 475

Query: 518 ILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFI 577
            L  +M    + PNA+ Y  +++   KE +I +    L+++  A +  D      L K +
Sbjct: 476 NLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGL 535

Query: 578 FKFHSSSSAVNQLVEMCNLGLIPDE 602
                   A     ++   GL+PDE
Sbjct: 536 STVGRIEEAEEYYAQVQKRGLVPDE 560


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 120/501 (23%), Positives = 213/501 (42%), Gaps = 12/501 (2%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           ++RD   +  +++ MIS + R +G  E   G   E+   G    A T+   +    +G  
Sbjct: 270 RRRDCAMNEVTYNVMISGLCR-SGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSR 328

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET----QLPNFLSFNI 190
                   DEM   G  PN      ++D   K G+      +LKE       PN + ++ 
Sbjct: 329 LKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDN 388

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +  LCK+  +     ++  M++ G  P+   +  L+    +      A++LL  M   G
Sbjct: 389 LIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSG 448

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
              +V ++ ++I+G  +      AG L E+M+  G  PN   Y  LI G  +    S+A 
Sbjct: 449 ILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLAC 508

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
             L+ +      PDL  +N LI  LS +G  ++A + Y  + +  LVPD +T+  L+   
Sbjct: 509 EALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGY 568

Query: 371 CLSGRFSLLPKLV-----CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
           C +G      +L+      GL+  AD   Y  LL  + K+    +   +  +ML  G  P
Sbjct: 569 CKTGNLEKADQLLRQMLNSGLKPNAD--TYTDLLEGYFKSNDYEKVSSILQSMLGSGDKP 626

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           DN+ +  ++R L  +  ++ A  V   +  N    + H++++++  L +     KA+ L 
Sbjct: 627 DNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLL 686

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
                E     +V Y   I G    G    A  ++  +    + PN  TY  ++   CK 
Sbjct: 687 DEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKN 746

Query: 546 RNIKMVKRLLQDVIDARIELD 566
            +I     L ++++D  I  D
Sbjct: 747 GDITDAFDLYKEMLDRGIAPD 767



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/465 (21%), Positives = 212/465 (45%), Gaps = 9/465 (1%)

Query: 108 GELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKI 167
           G +   G +    T+  F+  + +   +    + F+EM R     N    N+++  L + 
Sbjct: 232 GFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRS 291

Query: 168 GRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMF 223
           G V+      +E       P+  ++   +  LCK + +   K ++  M   G  PN+ ++
Sbjct: 292 GAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVY 351

Query: 224 EILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQ 283
             L++ F K G+ AEA+ +L  MI+ G   +   +  LI G  ++ +L  A  L ++M++
Sbjct: 352 GTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIK 411

Query: 284 NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
            G  P+  TY  L++G  +      AF  L+ + + G  P++  + ++I+ L + G   +
Sbjct: 412 VGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKE 471

Query: 344 ALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL----LPKLVCGLEVEADLVVYNALL 399
           A ++ + ++   L P+++ +  L+      G  SL    L K+     V  DL  YN+L+
Sbjct: 472 AGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKA-NVHPDLFCYNSLI 530

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
                 G   +A + Y  +  +G  PD +++ GL+ G C    +++A  + + ++ +   
Sbjct: 531 KGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLK 590

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            NA  +T +++   ++    K   + +  +      D   Y + IR L      E A+++
Sbjct: 591 PNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMV 650

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
            ++++   + P+ + Y  ++   CK  +++    LL ++    +E
Sbjct: 651 LTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLE 695



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 104/445 (23%), Positives = 195/445 (43%), Gaps = 37/445 (8%)

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
           R   M++L+K+     G  +L     P+  +++  +   CK  D    K V   M R+  
Sbjct: 220 RADAMELLWKLKGFMEGAGIL-----PDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDC 274

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
             N   + ++++  C+ G + EA+     M+  G S     +  L++G  +  RL  A  
Sbjct: 275 AMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKA 334

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           L ++M  +G  PN+V Y +L+ GFM+    + AF  L  + S G  P+ + ++ LI  L 
Sbjct: 335 LLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLC 394

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYN 396
           K+G    A  +   ++++ L PD++T                                YN
Sbjct: 395 KIGQLGRASKLLKEMIKVGLRPDTFT--------------------------------YN 422

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            L+    +    + A +L N M + G  P+ YS+  ++ GLC   +  EA N+ + ++  
Sbjct: 423 PLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISE 482

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
               NA ++  ++    + G    A +   +        D+  Y   I+GL   GR EEA
Sbjct: 483 GLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEA 542

Query: 517 YILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKF 576
              Y+Q++   + P+ +TY  ++  +CK  N++   +LL+ ++++ ++ +  T   L + 
Sbjct: 543 EEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEG 602

Query: 577 IFKFHSSSSAVNQLVEMCNLGLIPD 601
            FK +      + L  M   G  PD
Sbjct: 603 YFKSNDYEKVSSILQSMLGSGDKPD 627



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 118/510 (23%), Positives = 217/510 (42%), Gaps = 64/510 (12%)

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIA 191
           G   +   EM + G  P+TF  N +M   F+    D   ++L E +    LPN  S+ I 
Sbjct: 400 GRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIM 459

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILL------------------------ 227
           +  LC+  +     +++  M+ +G  PN  M+  L+                        
Sbjct: 460 INGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANV 519

Query: 228 --NCFC---------KMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
             + FC          +GR+ EA +    +   G       ++ LI G+ +   L+ A  
Sbjct: 520 HPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQ 579

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           L  +M+ +G  PN  TYT L++G+ ++  +    S L  +   G  PD   + ++I  LS
Sbjct: 580 LLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLS 639

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE------VEA 390
           +  + + A  V   + +  LVPD + + SL+S +C   + + + K V  L+      +E 
Sbjct: 640 RSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLC---KIADMEKAVGLLDEMAKEGLEP 696

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
            +V YNAL+  FC++G  ++A  +++++L KG  P+  ++  L+ G C    I +A ++Y
Sbjct: 697 GIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLY 756

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
           + ++    A +A V+  +     +A    +A+ L        Y  +V  +   + G  + 
Sbjct: 757 KEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA-NVSLFNTLVHGFCKR 815

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
           G+ +E   L   M    + PNA T   ++  F K   +    R+      A ++    + 
Sbjct: 816 GKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVF-----AELQQKKASQ 870

Query: 571 IRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
               +F   F           +M N GLIP
Sbjct: 871 SATDRFSLLF----------TDMINKGLIP 890



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 92/392 (23%), Positives = 179/392 (45%), Gaps = 11/392 (2%)

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
           P+  + ++L++ + K G +  A Q++ +M  LG + +      L+   + L R D    L
Sbjct: 171 PSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLL---KDLLRADAMELL 227

Query: 278 WEK---MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
           W+    M   G  P+V TY++ I+   +A+ F  A    + +     A + V +NV+I  
Sbjct: 228 WKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISG 287

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF----SLLPKLVCGLEVEA 390
           L + G+ ++A    + +++  L PD++T+ +L++ +C   R     +LL ++ C   ++ 
Sbjct: 288 LCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCS-GLKP 346

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           ++VVY  L+  F K G   +A  +   M+  G  P+   +  L+RGLC   ++  A  + 
Sbjct: 347 NIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLL 406

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
           + ++      +   +  ++    +      A +L           +V SY + I GL + 
Sbjct: 407 KEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQN 466

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
           G ++EA  L  +M    + PNA+ Y  +++   KE NI +    L+ +  A +  D    
Sbjct: 467 GESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCY 526

Query: 571 IRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
             L K +        A     ++   GL+PDE
Sbjct: 527 NSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDE 558



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 69/287 (24%), Positives = 126/287 (43%), Gaps = 3/287 (1%)

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
           S   +P     +VL+D   K GS  +A  V   + +L L P       LL  +  +    
Sbjct: 166 SRSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAME 225

Query: 378 LLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
           LL KL   + G  +  D+  Y+  +   CKA   + A K++  M  +    +  ++  ++
Sbjct: 226 LLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMI 285

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            GLC +  ++EA    + +V    + +A  + A+++ L +  R  +A  L          
Sbjct: 286 SGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLK 345

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
            ++V Y   + G ++ G+T EA+ +  +M    V PN   Y  ++   CK   +    +L
Sbjct: 346 PNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKL 405

Query: 555 LQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           L+++I   +  D  T   L +  F+ H    A   L EM N G++P+
Sbjct: 406 LKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPN 452


>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 109/446 (24%), Positives = 201/446 (45%), Gaps = 6/446 (1%)

Query: 119 AQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV-- 176
           A T    ++  W        ++ FDEM   G   +     I+++ L K  +  L IK+  
Sbjct: 77  AVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKLHE 136

Query: 177 -LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGR 235
            +K     +  ++ + + +LCK    +   D+   M+  G  P+V ++  L++  C+ GR
Sbjct: 137 KMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGR 196

Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
           + EA +    M   G S  V  +  LI G  R        +    MV  G SP+  T+T 
Sbjct: 197 LKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTI 256

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           LI G  +      A   L+++  +G  PD++ +N L++ L  +G  +DA  +++ L +  
Sbjct: 257 LIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRG 316

Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAV 412
           +  + +++  L++  C   +     +L   +    ++   V YN L+   C++G    A 
Sbjct: 317 IKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQ 376

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
           KL+  M   G      ++  LL GLC    ++EAI+++Q I       N  V + ++D +
Sbjct: 377 KLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGM 436

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
             AG+  +A + F          D ++Y + I GL   G   EA  L  QM+     P++
Sbjct: 437 CRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDS 496

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDV 558
            T+ V++ +  KE  I    +LL+++
Sbjct: 497 ITFNVIIQNLLKENEIHEAIQLLEEM 522



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/417 (23%), Positives = 183/417 (43%), Gaps = 22/417 (5%)

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN-- 256
           N + +   +   M  KG + + + + IL+N  CK  +        GL I L   +  N  
Sbjct: 91  NGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKT-------GLAIKLHEKMKGNCK 143

Query: 257 ----AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
                + ++ID   +      A  ++ +M+  G  P+VV Y+SL+ G         A  F
Sbjct: 144 GDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEF 203

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
              +E  G + D+  +N LI  LS+ G + +     + +++    PD++TF  L+  +C 
Sbjct: 204 FKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCK 263

Query: 373 SGRFSLLPKLVCGLEV------EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
            G+     ++   LE+      E D++ YN L++  C  G    A KL+ ++ D+G   +
Sbjct: 264 EGKVGEAQQI---LELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLN 320

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
            +S+  L+ G C  +KIDEA  +++ +       +   +  ++  L ++GR   A +LF 
Sbjct: 321 VFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFV 380

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
                   L + +Y V + GL + G  EEA  L+  +K     PN   + ++L   C+  
Sbjct: 381 EMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAG 440

Query: 547 NIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
            ++   +   ++    +E D      L   +      S AV  L +M   G +PD +
Sbjct: 441 KLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSI 497



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 62/283 (21%), Positives = 122/283 (43%), Gaps = 2/283 (0%)

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
           G  PD V    L+  +       DA+ ++D + E  L  D+ T+  L++ +C + +  L 
Sbjct: 72  GFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLA 131

Query: 380 PKLVCGLE--VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
            KL   ++   + D+  Y  ++   CK G   +A+ +++ M+  G  PD   +  L+ GL
Sbjct: 132 IKLHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGL 191

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
           C   ++ EA+  ++ +     + + + + +++  L  AG   +        +   +  D 
Sbjct: 192 CRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDA 251

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
            ++T+ I GL + G+  EA  +   M H    P+  TY  ++   C    ++   +L + 
Sbjct: 252 FTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFES 311

Query: 558 VIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           + D  I+L+  +   L     K      A     EM   GL P
Sbjct: 312 LADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKP 354



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/230 (23%), Positives = 106/230 (46%), Gaps = 4/230 (1%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           F+ +   G   N F+ NI+++   K  ++D   ++ +E +     P+ +++N  +  LC+
Sbjct: 309 FESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQ 368

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              V   + +   M   G +  +  + +LL+  CK G + EA  L   +       ++  
Sbjct: 369 SGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEV 428

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +++L+DG  R  +L+ A   ++++ +NG  P+ + Y  LI G     M S A   L  +E
Sbjct: 429 FSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQME 488

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            +G  PD +  NV+I  L K     +A+ + + +      PD      LL
Sbjct: 489 EKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 110/245 (44%), Gaps = 5/245 (2%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           L G+ E    +   LA  G  +   ++ + +  Y + +        F+EM   G  P+T 
Sbjct: 298 LVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTV 357

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKETQL-PNFL---SFNIALCNLCKLNDVSNVKDVIGMM 211
             N ++  L + GRV    K+  E Q    FL   ++ + L  LCK   +    D+   +
Sbjct: 358 TYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSI 417

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
            +    PN+ +F ILL+  C+ G++ EA++    +   G      A+ +LI+G      L
Sbjct: 418 KKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGML 477

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
             A  L  +M + GC P+ +T+  +I+  ++      A   L+ + +   +PD    ++L
Sbjct: 478 SEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSML 537

Query: 332 IDCLS 336
           + CL+
Sbjct: 538 L-CLA 541



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 3/214 (1%)

Query: 389 EADLVVYNALL-SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
           E D V    L+   + + G P+ AV+L++ M +KG   D  ++  L+ GLC ARK   AI
Sbjct: 74  EPDAVTVTTLVKGVWMENGIPD-AVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAI 132

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            +++ +   N   +   +  I+D L + G   +A+ +F   I      DVV Y+  + GL
Sbjct: 133 KLHEKM-KGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGL 191

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
              GR +EA   + +M+   +  + YTY  ++    +    K V   L  ++D     D 
Sbjct: 192 CRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDA 251

Query: 568 HTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            T   L   + K      A   L  M + G  PD
Sbjct: 252 FTFTILIDGLCKEGKVGEAQQILELMHHKGKEPD 285


>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1147

 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 104/448 (23%), Positives = 198/448 (44%), Gaps = 12/448 (2%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF----LSFNIALCNLCKLN 199
           EM R     +    NI+++   K G+++   +   + Q   F     SFN  +   CK  
Sbjct: 299 EMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEGYCKQG 358

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
                  V   M+  G YP    + I +   C+ GRI +A +LL  M     +  V ++ 
Sbjct: 359 LFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSM----AAPDVVSYN 414

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
            L+ G+ ++R+   A  L++ +     +P++VTY +LI G  E+     A    + + S+
Sbjct: 415 TLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQ 474

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR---- 375
              PD++ +  L+    K G+   A ++YD +L   + PD Y + +        G     
Sbjct: 475 LIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKA 534

Query: 376 FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
           F L  ++V       DL +YN  +   CK G   +A++    +   G  PD+ ++  ++R
Sbjct: 535 FRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIR 594

Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
           G     +   A ++Y  ++    + +   +  ++    +AGR  +A Q            
Sbjct: 595 GYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRP 654

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
           +V+++   + G+ + G  +EAY    +M+   + PN Y+Y +++   C     + V +L 
Sbjct: 655 NVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVKLY 714

Query: 556 QDVIDARIELDYHTSIRLTKFIFKFHSS 583
           ++++D  IE D +T   L K + K H S
Sbjct: 715 KEMLDKEIEPDGYTHRALFKHLEKDHES 742



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 159/618 (25%), Positives = 266/618 (43%), Gaps = 53/618 (8%)

Query: 27  SIHQISSPKVCATTHQDFPIILAPHIVHSTLLNC----PSDLIALSFFIWCAKQRDYFHD 82
           S H  + P    ++HQ F ++L    +   +LN     P   IA  FF W  +Q D    
Sbjct: 98  SSHGDNQPNRKWSSHQ-FRLLLTDPDLLIRVLNMIRVKPE--IAFRFFNWIQRQSDVKQS 154

Query: 83  VQSFDHMISVVTRLTGRFETV----RGI------VGELARVGCVIKAQTFLLFLRIYW-- 130
            Q+F  M+ ++       E      R I      + +L   G   K     L   + W  
Sbjct: 155 RQAFAAMLEILAENDLMSEAYLVAERSINLGMHEIDDLLIDGNFDKLVALKLLDLLLWVY 214

Query: 131 -RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ-----LPN 184
            +  M    L +F++M R GF P+    NIV+ VL +  R+    + + ET      +P 
Sbjct: 215 TKKSMAEKCLLSFEKMIRKGFLPSVRNCNIVLRVL-RDSRMMNKAQEVYETMVMHGIMPT 273

Query: 185 FLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLG 244
            ++FN  L +  K  D+  V  +   M R+    +   + IL+N F K G++ EA +  G
Sbjct: 274 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHG 333

Query: 245 LMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
            M   G  ++  ++  LI+G+ +    D A  + ++M+  G  P   TY   I+   E  
Sbjct: 334 DMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFG 393

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
               A   L  +     APD+V +N L+    KM  + +A  ++D L    + P   T+ 
Sbjct: 394 RIDDARELLSSMA----APDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYN 449

Query: 365 SLLSTVCLSGRFSLLPKLVCGLEVE---ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
           +L+  +C SG      +L   +  +    D++ Y  LL  F K G  + A ++Y+ ML K
Sbjct: 450 TLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRK 509

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM-NNPAVNAHVHTAIVDRLIEAGRCHK 480
           G  PD Y++     G       ++A  +++ +V  ++ A +  ++   +D L + G   K
Sbjct: 510 GIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEK 569

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
           AI+  R+        D V+YT  IRG LE GR + A  LY +M    + P+  TY V++ 
Sbjct: 570 AIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIH 629

Query: 541 SFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVE-MCNLGLI 599
              K                 R+E  +  S  + K   +   +    N L+  MC  G I
Sbjct: 630 GHAKA---------------GRLEQAFQYSTEMKKRGVR--PNVMTHNALLHGMCKAGNI 672

Query: 600 PDEMWRKLGLLSDETMTP 617
            DE +R L  + +E ++P
Sbjct: 673 -DEAYRYLCKMEEEGISP 689



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/415 (22%), Positives = 184/415 (44%), Gaps = 4/415 (0%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           +G+ E  R   G++ R G  +   +F   +  Y +  ++       DEM   G  P T  
Sbjct: 322 SGKMEEARRFHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTST 381

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
            NI +  L + GR+D   ++L     P+ +S+N  +    K+        +   +     
Sbjct: 382 YNIYIRALCEFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNI 441

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
            P++  +  L++  C+ G +  A +L   M +      V  +T L+ GF +   L MA  
Sbjct: 442 NPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATE 501

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF-LDMLESEGHAPDLVFHNVLIDCL 335
           ++++M++ G  P+   YT+   G +       AF    +M+  + HAPDL  +NV ID L
Sbjct: 502 IYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGL 561

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADL 392
            K+G+ + A++    +  + LVPD  T+ +++      GRF +   L   +    +   +
Sbjct: 562 CKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSV 621

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           + Y  L+    KAG   QA +    M  +G  P+  +   LL G+C A  IDEA      
Sbjct: 622 ITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCK 681

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
           +     + N + +T ++ +  +  +  + ++L++  + ++   D  ++    + L
Sbjct: 682 MEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDGYTHRALFKHL 736


>gi|326517954|dbj|BAK07229.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 549

 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 98/406 (24%), Positives = 183/406 (45%), Gaps = 8/406 (1%)

Query: 32  SSPKVCATTHQDFPIILAPHIVHSTLLNCPSDLIA-LSFFIWCAKQRDYFHDVQSFDHMI 90
           +SP+         P+ ++  +V   L    SD +A   FF+W   Q  Y H   S++ M+
Sbjct: 108 ASPEAIVIAMDCCPVRVSDRMVDKILRRFGSDWVAAFGFFMWAGAQEGYRHSADSYNSMV 167

Query: 91  SVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGF 150
            ++ +   +F+ + G++ ++  +G ++   T    +R       +   ++AF++M +FG 
Sbjct: 168 DILGKFK-QFDLMWGLISQMDEIGGLVSLATMTKVMRRLAGASRWTDAIDAFNKMDQFGV 226

Query: 151 TPNTFARNIVMDVLFK---IGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDV 207
             +T A N+++D L K   + R     + L+ +  P+  SFN  +   CK   ++  +D+
Sbjct: 227 VKDTTAMNVLLDTLCKERSVKRARGAFQELRGSVPPDESSFNTLVHGWCKARMMNEARDM 286

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
           +  M   GF P+V  +  L+  +C        Y +L  M + G   +V  +T+++    +
Sbjct: 287 MKEMEEHGFKPSVITYTSLIEAYCMEKDFQTVYAILNEMRSKGCPPNVITYTIVMHALGK 346

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
             R   A  +++K+  +GC+P+   Y SLI     A     A S +D +   G  P +  
Sbjct: 347 AGRTQEALDIFDKVRGDGCAPDASFYNSLIYILGRAGRLEDANSVVDKMRMTGVRPTVAT 406

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL- 386
            N LI         ++AL +   + E    PD  T+  LL   C      +L  L+C + 
Sbjct: 407 FNTLISAACDHSQAENALKMLVKMEEQSCKPDIKTYTPLLKLCCKRQWIKVLRFLICHMF 466

Query: 387 --EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
             ++  D   Y  L+++ C+ G P Q+      M+ KGF P   +F
Sbjct: 467 RKDITPDFSTYTLLVTWLCRNGKPAQSCLFLEEMVLKGFAPKKETF 512



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/311 (20%), Positives = 123/311 (39%), Gaps = 13/311 (4%)

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
           ++W    Q G   +  +Y S++    + K F + +  +  ++  G    L     ++  L
Sbjct: 147 FMWAG-AQEGYRHSADSYNSMVDILGKFKQFDLMWGLISQMDEIGGLVSLATMTKVMRRL 205

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS-------GRFSLLPKLVCGLEV 388
           +    + DA+D ++ + +  +V D+     LL T+C         G F  L        V
Sbjct: 206 AGASRWTDAIDAFNKMDQFGVVKDTTAMNVLLDTLCKERSVKRARGAFQELRG-----SV 260

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
             D   +N L+  +CKA   N+A  +   M + GF P   ++  L+   C  +       
Sbjct: 261 PPDESSFNTLVHGWCKARMMNEARDMMKEMEEHGFKPSVITYTSLIEAYCMEKDFQTVYA 320

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           +   +       N   +T ++  L +AGR  +A+ +F +   +    D   Y   I  L 
Sbjct: 321 ILNEMRSKGCPPNVITYTIVMHALGKAGRTQEALDIFDKVRGDGCAPDASFYNSLIYILG 380

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
             GR E+A  +  +M+   V P   T+  ++ + C     +   ++L  + +   + D  
Sbjct: 381 RAGRLEDANSVVDKMRMTGVRPTVATFNTLISAACDHSQAENALKMLVKMEEQSCKPDIK 440

Query: 569 TSIRLTKFIFK 579
           T   L K   K
Sbjct: 441 TYTPLLKLCCK 451



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/354 (19%), Positives = 151/354 (42%), Gaps = 4/354 (1%)

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           G   S +++  ++D   + ++ D+   L  +M + G   ++ T T +++    A  ++ A
Sbjct: 155 GYRHSADSYNSMVDILGKFKQFDLMWGLISQMDEIGGLVSLATMTKVMRRLAGASRWTDA 214

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
               + ++  G   D    NVL+D L K  S   A   +  L    + PD  +F +L+  
Sbjct: 215 IDAFNKMDQFGVVKDTTAMNVLLDTLCKERSVKRARGAFQEL-RGSVPPDESSFNTLVHG 273

Query: 370 VCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
            C +   +    ++  +E    +  ++ Y +L+  +C          + N M  KG  P+
Sbjct: 274 WCKARMMNEARDMMKEMEEHGFKPSVITYTSLIEAYCMEKDFQTVYAILNEMRSKGCPPN 333

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
             ++  ++  L  A +  EA++++  +  +  A +A  + +++  L  AGR   A  +  
Sbjct: 334 VITYTIVMHALGKAGRTQEALDIFDKVRGDGCAPDASFYNSLIYILGRAGRLEDANSVVD 393

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
           +  +      V ++   I    +  + E A  +  +M+  +  P+  TY  +L   CK +
Sbjct: 394 KMRMTGVRPTVATFNTLISAACDHSQAENALKMLVKMEEQSCKPDIKTYTPLLKLCCKRQ 453

Query: 547 NIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
            IK+++ L+  +    I  D+ T   L  ++ +    + +   L EM   G  P
Sbjct: 454 WIKVLRFLICHMFRKDITPDFSTYTLLVTWLCRNGKPAQSCLFLEEMVLKGFAP 507



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/253 (19%), Positives = 102/253 (40%), Gaps = 17/253 (6%)

Query: 72  WCA-----KQRDYFHDVQSFDHMISVVTR--------LTGRFETVRGIVGELARVGCVIK 118
           WC      + RD   +++      SV+T         +   F+TV  I+ E+   GC   
Sbjct: 274 WCKARMMNEARDMMKEMEEHGFKPSVITYTSLIEAYCMEKDFQTVYAILNEMRSKGCPPN 333

Query: 119 AQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK 178
             T+ + +    +       L+ FD++   G  P+    N ++ +L + GR++    V+ 
Sbjct: 334 VITYTIVMHALGKAGRTQEALDIFDKVRGDGCAPDASFYNSLIYILGRAGRLEDANSVVD 393

Query: 179 ETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
           + ++    P   +FN  +   C  +   N   ++  M  +   P+++ +  LL   CK  
Sbjct: 394 KMRMTGVRPTVATFNTLISAACDHSQAENALKMLVKMEEQSCKPDIKTYTPLLKLCCKRQ 453

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
            I     L+  M     +   + +T+L+    R  +   +    E+MV  G +P   T+ 
Sbjct: 454 WIKVLRFLICHMFRKDITPDFSTYTLLVTWLCRNGKPAQSCLFLEEMVLKGFAPKKETFD 513

Query: 295 SLIKGFMEAKMFS 307
            + +   +A + S
Sbjct: 514 LVAEKLDKANLHS 526


>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
 gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
          Length = 702

 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 117/516 (22%), Positives = 222/516 (43%), Gaps = 18/516 (3%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G  +    +   L R G      T+   +    + +     L+  DEM  +G   +    
Sbjct: 172 GDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCY 231

Query: 158 NIVMDVLFKIGRVDLGIKVLKE-----TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
           N ++   F+ G  +  +KV ++        PN  ++ + L  LCKL       +V   M+
Sbjct: 232 NALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMM 291

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
                 +   + IL++  C+ G +  A ++   M+  G  L V+ +  LI GF  + R  
Sbjct: 292 ANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTG 351

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH-APDLVFHNVL 331
            A   W+    +G    + TY  + KG +++ M S A   L  LE++   +PD V    L
Sbjct: 352 EAWKFWDSTGFSGIR-QITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTL 410

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-------FSLLPKLVC 384
           I  L + G  + A ++ +         D +++ S+++  C  GR       +  + K  C
Sbjct: 411 IHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGC 470

Query: 385 GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
               + +  VYNAL++ FC+    N A+K+Y  M   G  P   ++  L+ GLC A K  
Sbjct: 471 ----KPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQ 526

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
           EA ++ + ++      +   + +++  L    +   A++++   +     +DV+ + + I
Sbjct: 527 EASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILI 586

Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
            GL   G+ +EA+ +Y +MK     PN  TY  ++  F +  +I     L   ++D  ++
Sbjct: 587 HGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLK 646

Query: 565 LDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
            D  T     K +   + +   V  L E+   G++P
Sbjct: 647 PDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMP 682



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 110/492 (22%), Positives = 199/492 (40%), Gaps = 48/492 (9%)

Query: 123 LLFLRIYWRGEMYGMVLEAFDEMGRF-GFTPNTFARNIVMDVLFKIGR--------VDLG 173
           L+ L  + R  M    L AF ++    G  P   + N ++D   +  R          L 
Sbjct: 87  LVVLSAFSRALMPDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASLS 146

Query: 174 IKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKM 233
                    PN  ++NI L +LC   DV     +   + R+G  P+   +  L++   K 
Sbjct: 147 HGAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKH 206

Query: 234 GRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN-GCSPNVVT 292
            ++  A  LL  M   G       +  L+ G  R    + A  +WE++V++ G SPN+ T
Sbjct: 207 DQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLAT 266

Query: 293 YTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
           Y  ++ G  +   F  A      + +  H  D V + +LI  L + G  D A  VY  ++
Sbjct: 267 YKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMV 326

Query: 353 ELKLVPDSYTFCSLLSTVCLSGRFSLLPKL--VCGLEVEADLVVYNALLSYFCKAGFPNQ 410
           +  LV D   + SL+   C  GR     K     G      +  YN +      +G  ++
Sbjct: 327 KAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSE 386

Query: 411 AVKLYNTML-DKGFTPDNYSFVGLLRGLC-------------GARKIDEAIN-------- 448
           A +L   +  D   +PD  +F  L+ GLC              AR   E ++        
Sbjct: 387 ATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMI 446

Query: 449 --------------VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
                         VY+ +V +    N+HV+ A+++      + + AI+++         
Sbjct: 447 NRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCC 506

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
             +++Y   I GL +  + +EA  L  +M      P+  TY  ++   C+++ + +  R+
Sbjct: 507 PTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRI 566

Query: 555 LQDVIDARIELD 566
             +++DA +++D
Sbjct: 567 WDEILDAGLQVD 578



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 96/418 (22%), Positives = 179/418 (42%), Gaps = 46/418 (11%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP---NFLSFNIALCNLCKL 198
           + +M + G   +    N ++    ++GR     K    T         ++NI    L   
Sbjct: 322 YSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDS 381

Query: 199 NDVSNVKDVIGMMVRKGF-YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
             VS   +++  +       P+   F  L++  C+ G    A+++L      G  L V +
Sbjct: 382 GMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFS 441

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           ++ +I+ F +  R   A  +++ MV++GC PN   Y +LI GF      + A      + 
Sbjct: 442 YSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMT 501

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
           S G  P ++ +N LID L K   Y +A  +   +LE    PD  T+ SL+  +C   +  
Sbjct: 502 SNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVD 561

Query: 378 LLPK-----LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
           +  +     L  GL+V  D++V+N L+   C AG  ++A  +Y  M +K  +P+  ++  
Sbjct: 562 VALRIWDEILDAGLQV--DVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNT 619

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           L+ G      ID+A +++               TAI+D  ++                  
Sbjct: 620 LMDGFYEIGSIDKAASLW---------------TAILDNGLKP----------------- 647

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
              D+V+Y   I+GL    RT E  +L +++    + P   T+ +++ +  K   I++
Sbjct: 648 ---DIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYGPIQI 702



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/235 (23%), Positives = 108/235 (45%), Gaps = 4/235 (1%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNL 195
           E +  M + G  PN+   N +++   ++ +++  IK+  E       P  +++N  +  L
Sbjct: 460 EVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGL 519

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
           CK         +   M+ +GF P++R +  L+   C+  ++  A ++   ++  G  + V
Sbjct: 520 CKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDV 579

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
               +LI G     ++D A  ++ +M +  CSPN+VTY +L+ GF E      A S    
Sbjct: 580 MVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTA 639

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
           +   G  PD+V +N  I  L       + + + + +L   ++P   T+  L+  V
Sbjct: 640 ILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAV 694



 Score = 41.2 bits (95), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 7/108 (6%)

Query: 136 GMVLEAFD---EMGRFGFTPNTFARNIVMDVLFKIGRVD----LGIKVLKETQLPNFLSF 188
           G V EAF    EM     +PN    N +MD  ++IG +D    L   +L     P+ +++
Sbjct: 593 GKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTY 652

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
           N  +  LC  N       ++  ++  G  P V  + IL+    K G I
Sbjct: 653 NTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYGPI 700


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 103/442 (23%), Positives = 198/442 (44%), Gaps = 7/442 (1%)

Query: 101 ETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIV 160
           +   G+  ++   G      T+   +  Y     +  V+   +EM   G  P+ +    +
Sbjct: 255 DRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSL 314

Query: 161 MDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
           ++ L   GR      L   ++++   PN   + I +        +S + D++ +MV  G 
Sbjct: 315 LNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGL 374

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
            P+  +F I+   + K   I EA  +   M   G S  V  +  LID   +L R+D A  
Sbjct: 375 SPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVL 434

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
            + +M+  G +PN+  + SL+ G      +  A  F   + ++G  PD+VF N ++  L 
Sbjct: 435 KFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLC 494

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPK---LVCGLEVEADLV 393
             G    A  + D +  +   P   ++ +L+   CL GR     K   ++  + ++ D  
Sbjct: 495 TKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEW 554

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            YN LL  +C+AG  + A  ++  ML  G TP   ++  +L GL   R+  EA  +Y  +
Sbjct: 555 TYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNM 614

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
           + +    N  ++  I++ L +     +A +LF+    + + L++ ++ + I  L + GR 
Sbjct: 615 ITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRN 674

Query: 514 EEAYILYSQMKHIAVPPNAYTY 535
           E+A  L++ +    + P+ +TY
Sbjct: 675 EDAMHLFATISSYGLVPDVFTY 696



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 126/537 (23%), Positives = 242/537 (45%), Gaps = 49/537 (9%)

Query: 83  VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF 142
           V +F+H+++ V+R++GR    R    E                           +V+  F
Sbjct: 49  VIAFNHLLTAVSRVSGR----RSSTTESE-------------------------LVVSLF 79

Query: 143 DEMGR---FGFTPNTFARNIVMDVLFKIGRVDLGIK----VLKETQLPNFLSFNIALCNL 195
           + M R      TP+    +I++    ++GR++ G      +LK     N +  N  L  L
Sbjct: 80  NRMIRECTIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGL 139

Query: 196 CKLNDVSNVKDV-IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI-TLGTSL 253
           C    +    D+ +  M   G  P+V  +  LL  FC   R  EA +LL +M  + G S 
Sbjct: 140 CDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSC 199

Query: 254 SVN--AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
             N  ++ ++I+GF    ++D A  L+ +M+  G  PNVVTYT++I G  +A++   A  
Sbjct: 200 PPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEG 259

Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
               +  +G  PD   +N LI     +G + + + + + +    L PD YT+ SLL+ +C
Sbjct: 260 VFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLC 319

Query: 372 LSGR---FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
            +GR      L   +    ++ ++ +Y  L+  +   G  ++   L N M++ G +PD++
Sbjct: 320 NNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHH 379

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
            F  +         IDEA++++  +     + +   + A++D L + GR   A+  F + 
Sbjct: 380 IFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQM 439

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
           + E    ++  +   + GL    + E+A   Y +M +  + P+   +  +L + C +  +
Sbjct: 440 MNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQV 499

Query: 549 KMVKRL--LQDVIDARIE-LDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
              +RL  L + +  R   + Y T I     + +   ++ +++    M ++GL PDE
Sbjct: 500 MKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDV---MLSVGLKPDE 553



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 121/547 (22%), Positives = 225/547 (41%), Gaps = 47/547 (8%)

Query: 101 ETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF----DEMGRFGFTPNTFA 156
           E +  +V  +  +GC     ++   L+ +   +     LE      D  GR    PN  +
Sbjct: 147 EAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGR-SCPPNVVS 205

Query: 157 RNIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
             IV++  F  G+VD    L ++++     PN +++   +  LCK   V   + V   M+
Sbjct: 206 YAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMI 265

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
            KG  P+   +  L++ +  +G+  E  ++L  M   G       +  L++      R  
Sbjct: 266 DKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCR 325

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFM----------------------EAKMFSIAF 310
            A +L++ M++ G  PNV  Y  LI G+                       +  +F+I F
Sbjct: 326 EARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIF 385

Query: 311 S-------------FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
           +               + ++ +G +PD+V +  LID L K+G  DDA+  ++ ++   + 
Sbjct: 386 TAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVA 445

Query: 358 PDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKL 414
           P+ + F SL+  +C   ++    +    +    +  D+V +N +L   C  G   +A +L
Sbjct: 446 PNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRL 505

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
            + M   G  P   S+  L+ G C   +IDEA      ++      +   +  ++     
Sbjct: 506 IDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCR 565

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
           AGR   A  +FR  +       VV+Y+  + GL    R  EA  LY  M       N + 
Sbjct: 566 AGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWI 625

Query: 535 YRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMC 594
           Y ++L    K   +    +L Q +     +L+  T   +   +FK   +  A++    + 
Sbjct: 626 YNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATIS 685

Query: 595 NLGLIPD 601
           + GL+PD
Sbjct: 686 SYGLVPD 692



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 83/368 (22%), Positives = 169/368 (45%), Gaps = 9/368 (2%)

Query: 122 FLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVL 177
           F +    Y +  M    +  F++M + G +P+      ++D L K+GRVD  +    +++
Sbjct: 381 FNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMM 440

Query: 178 KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIA 237
            E   PN   FN  +  LC ++     K+    M+ +G  P+V  F  +L   C  G++ 
Sbjct: 441 NEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVM 500

Query: 238 EAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLI 297
           +A +L+ LM  +GT   V ++T LI G   + R+D A    + M+  G  P+  TY +L+
Sbjct: 501 KAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLL 560

Query: 298 KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
            G+  A     A+     +   G  P +V ++ ++  L     + +A ++Y  ++     
Sbjct: 561 HGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQ 620

Query: 358 PDSYTFCSLLSTV----CLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVK 413
            + + +  +L+ +    C+   F L   L C  + + ++  +N ++    K+G    A+ 
Sbjct: 621 WNIWIYNIILNGLSKNNCVDEAFKLFQSL-CSKDFQLEITTFNIMIGALFKSGRNEDAMH 679

Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
           L+ T+   G  PD +++  +   L     ++E  +++  +  +    N+ +  A+V RL+
Sbjct: 680 LFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLL 739

Query: 474 EAGRCHKA 481
             G   +A
Sbjct: 740 HRGDITRA 747



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 123/280 (43%), Gaps = 23/280 (8%)

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVC-LSGR----------FSLLPKLV--CGLEV 388
           DDAL ++DGLL          F  LL+ V  +SGR           SL  +++  C ++V
Sbjct: 31  DDALKLFDGLLTHARPASVIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIKV 90

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
             D   Y+ L+  FC+ G        +  +L  G+  +N     LL+GLC A+++ EA++
Sbjct: 91  TPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMD 150

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEA----GRCHKAIQLFRRAIVEK---YPLDVVSYT 501
           +   +V   P +         + L++      R  +A++L       +    P +VVSY 
Sbjct: 151 I---LVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYA 207

Query: 502 VAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
           + I G    G+ ++AY L+ +M    + PN  TY  ++   CK + +   + + Q +ID 
Sbjct: 208 IVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDK 267

Query: 562 RIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            ++ D  T   L             V  L EM   GL PD
Sbjct: 268 GVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPD 307



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/259 (20%), Positives = 109/259 (42%), Gaps = 7/259 (2%)

Query: 136 GMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIK----VLKETQLPNFLSF 188
           G V++A    D M R G  P   +   ++     +GR+D   K    +L     P+  ++
Sbjct: 497 GQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTY 556

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           N  L   C+   + +   V   M+R G  P V  +  +L+      R +EA +L   MIT
Sbjct: 557 NTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMIT 616

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
            G   ++  + ++++G  +   +D A  L++ +        + T+  +I    ++     
Sbjct: 617 SGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNED 676

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A      + S G  PD+  + ++ + L + G  ++  D++  + +    P+S    +L+ 
Sbjct: 677 AMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVR 736

Query: 369 TVCLSGRFSLLPKLVCGLE 387
            +   G  +     +C L+
Sbjct: 737 RLLHRGDITRAGAYLCKLD 755


>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
 gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
 gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
 gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 485

 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 90/367 (24%), Positives = 184/367 (50%), Gaps = 6/367 (1%)

Query: 184 NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
           +  S+NI +  LC+ +       V+G M++ G+ P+V     L+N FC+  R+ +A  L+
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 162

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
             M  +G    V  +  +IDG  ++  ++ A  L+++M ++G   + VTY SL+ G   +
Sbjct: 163 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 222

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
             +S A   +  +      P+++    +ID   K G + +A+ +Y+ +    + PD +T+
Sbjct: 223 GRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTY 282

Query: 364 CSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
            SL++ +C+ GR     +++  +  +    D+V YN L++ FCK+   ++  KL+  M  
Sbjct: 283 NSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQ 342

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
           +G   D  ++  +++G   A + D A  ++  +   +   N   ++ ++  L    R  K
Sbjct: 343 RGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEK 399

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
           A+ LF      +  LD+ +Y + I G+ + G  E+A+ L+  +    + P+  +Y  M+ 
Sbjct: 400 ALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMIS 459

Query: 541 SFCKERN 547
            FC++R 
Sbjct: 460 GFCRKRQ 466



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 97/383 (25%), Positives = 189/383 (49%), Gaps = 6/383 (1%)

Query: 170 VDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
           +DL  K+++   LP+ + F+  L  + K  +   V  +   M   G   ++  + I++NC
Sbjct: 54  IDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINC 113

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
            C+  R   A  ++G M+  G    V   + LI+GF +  R+  A  L  KM + G  P+
Sbjct: 114 LCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPD 173

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
           VV Y ++I G  +  + + A    D +E +G   D V +N L+  L   G + DA  +  
Sbjct: 174 VVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMR 233

Query: 350 GLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAG 406
            ++   +VP+  TF +++      G+FS   KL   +    V+ D+  YN+L++  C  G
Sbjct: 234 DMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHG 293

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
             ++A ++ + M+ KG  PD  ++  L+ G C ++++DE   +++ +       +   + 
Sbjct: 294 RVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYN 353

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
            I+    +AGR   A ++F R  ++  P ++ +Y++ + GL    R E+A +L+  M+  
Sbjct: 354 TIIQGYFQAGRPDAAQEIFSR--MDSRP-NIRTYSILLYGLCMNWRVEKALVLFENMQKS 410

Query: 527 AVPPNAYTYRVMLLSFCKERNIK 549
            +  +  TY +++   CK  N++
Sbjct: 411 EIELDITTYNIVIHGMCKIGNVE 433



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/407 (23%), Positives = 193/407 (47%), Gaps = 10/407 (2%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFL 186
           + + Y +V+  F  M   G   + ++ NIV++ L +  R  + +    K++K    P+ +
Sbjct: 81  KSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVV 140

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           + +  +   C+ N V +  D++  M   GF P+V ++  +++  CK+G + +A +L   M
Sbjct: 141 TVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRM 200

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
              G       +  L+ G     R   A  L   MV     PNV+T+T++I  F++   F
Sbjct: 201 ERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKF 260

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
           S A    + +      PD+  +N LI+ L   G  D+A  + D ++    +PD  T+ +L
Sbjct: 261 SEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTL 320

Query: 367 LSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           ++  C S R     KL   +       D + YN ++  + +AG P+ A ++++ M  +  
Sbjct: 321 INGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR-- 378

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
            P+  ++  LL GLC   ++++A+ +++ +  +   ++   +  ++  + + G    A  
Sbjct: 379 -PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWD 437

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
           LFR    +    DVVSYT  I G     + +++ +LY +M+   + P
Sbjct: 438 LFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 94/378 (24%), Positives = 175/378 (46%), Gaps = 11/378 (2%)

Query: 81  HDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLE 140
           HD+ S++ +I+ + R + RF     +VG++ + G      T    +  + +G      ++
Sbjct: 102 HDLYSYNIVINCLCRCS-RFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAID 160

Query: 141 AFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLC 196
              +M   GF P+    N ++D   KIG V+  +++    +      + +++N  +  LC
Sbjct: 161 LVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLC 220

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
                S+   ++  MV +   PNV  F  +++ F K G+ +EA +L   M        V 
Sbjct: 221 CSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVF 280

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
            +  LI+G     R+D A  + + MV  GC P+VVTY +LI GF ++K           +
Sbjct: 281 TYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 340

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
              G   D + +N +I    + G  D A +++     +   P+  T+  LL  +C++ R 
Sbjct: 341 AQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFS---RMDSRPNIRTYSILLYGLCMNWRV 397

Query: 377 S---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
               +L + +   E+E D+  YN ++   CK G    A  L+ ++  KG  PD  S+  +
Sbjct: 398 EKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTM 457

Query: 434 LRGLCGARKIDEAINVYQ 451
           + G C  R+ D++  +Y+
Sbjct: 458 ISGFCRKRQWDKSDLLYR 475



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 139/285 (48%), Gaps = 3/285 (1%)

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           L+ KM+Q+   P++V ++ ++    ++K + +  S    +E  G   DL  +N++I+CL 
Sbjct: 56  LFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLC 115

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLV 393
           +   +  AL V   +++    PD  T  SL++  C   R      LV  +E      D+V
Sbjct: 116 RCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVV 175

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
           +YN ++   CK G  N AV+L++ M   G   D  ++  L+ GLC + +  +A  + + +
Sbjct: 176 IYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM 235

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
           VM +   N    TA++D  ++ G+  +A++L+          DV +Y   I GL   GR 
Sbjct: 236 VMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRV 295

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           +EA  +   M      P+  TY  ++  FCK + +    +L +++
Sbjct: 296 DEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 340



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/445 (21%), Positives = 192/445 (43%), Gaps = 63/445 (14%)

Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
           + E   L   MI      S+  ++ ++    + +  D+   L+  M   G   ++ +Y  
Sbjct: 50  LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHA--------------------------------- 322
           +I        F IA S +  +   G+                                  
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169

Query: 323 --PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
             PD+V +N +ID   K+G  +DA++++D +    +  D+ T+ SL++ +C SGR+S   
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229

Query: 381 KLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
           +L+  +   ++  +++ + A++  F K G  ++A+KLY  M  +   PD +++  L+ GL
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
           C   ++DEA  +   +V      +   +  +++   ++ R  +  +LFR         D 
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT 349

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
           ++Y   I+G  + GR + A  ++S+M      PN  TY ++L   C    ++    L ++
Sbjct: 350 ITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFEN 406

Query: 558 VIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD--EMWRKLGL--LSDE 613
           +  + IELD      +T +    H           MC +G + D  +++R L    L  +
Sbjct: 407 MQKSEIELD------ITTYNIVIHG----------MCKIGNVEDAWDLFRSLSCKGLKPD 450

Query: 614 TMTPVSLFDGFVPCERRAGNANHLL 638
            ++  ++  GF  C +R  + + LL
Sbjct: 451 VVSYTTMISGF--CRKRQWDKSDLL 473


>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
          Length = 820

 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 102/433 (23%), Positives = 196/433 (45%), Gaps = 3/433 (0%)

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
           + R G    A TF   +  Y R +   +  + F +M   GF+ +  +   +++   + GR
Sbjct: 155 MVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGR 214

Query: 170 VDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
           +D  +++ +E   P+  +    +  LC          ++  M   G+ P  R +  L++ 
Sbjct: 215 IDEALELFREMTQPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDL 274

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
           +C+  +  EA ++L  M   G    V   T++++ + R  R+  A  ++E M   GC PN
Sbjct: 275 WCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPN 334

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
           V TY ++++GF  A     A + LD +   G  PD+V +N+LI      G    A  +  
Sbjct: 335 VWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLR 394

Query: 350 GLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAG 406
            +    L  D YT+  L+  +C +G+      L  GLE   +  + V +N +++  CKAG
Sbjct: 395 LMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAG 454

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
             + A      M+  G+ PD Y++   +  LC  +   E +     ++  +   +   +T
Sbjct: 455 KFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYT 514

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
            +++RL        A +++ + + +    DVV+YT ++R     GR +EA  + ++MK  
Sbjct: 515 IVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKC 574

Query: 527 AVPPNAYTYRVML 539
               +A  Y  ++
Sbjct: 575 RTIVDAMAYNTLI 587



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 88/367 (23%), Positives = 167/367 (45%), Gaps = 7/367 (1%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P   ++N  +  LC+  D+ + +  + +MVR G+ P+   F  L+  +C+  ++  A+ L
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDL 186

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
              M   G S    ++  LI+GF    R+D A  L+ +M Q    P++ T+ +L+KG  +
Sbjct: 187 FCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQ----PDMYTHAALVKGLCD 242

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
           A         L  ++  G  P    +  L+D   +    ++A  + + + +  L+P   T
Sbjct: 243 AGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVT 302

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
              +++  C  GR S   ++   +     E ++  YNA++  FC AG   +A+ L + M 
Sbjct: 303 CTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMR 362

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
           + G  PD  ++  L+RG C    I  A  + + +  N  A + + +  ++D L + G+  
Sbjct: 363 ECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVD 422

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
           +A  LF          + V++   I GL + G+ + A      M      P+ YTY   +
Sbjct: 423 EACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFI 482

Query: 540 LSFCKER 546
            + CK +
Sbjct: 483 ENLCKTK 489



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 110/532 (20%), Positives = 210/532 (39%), Gaps = 66/532 (12%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
            GR E    ++ ++  +G     + +   + ++ R +      +  +EM   G  P    
Sbjct: 243 AGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVT 302

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
             IV++   + GR+   ++V +  +     PN  ++N  +   C    V     ++  M 
Sbjct: 303 CTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMR 362

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
             G  P+V  + +L+   C  G I  A++LL LM   G +     + VLID   +  ++D
Sbjct: 363 ECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVD 422

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A  L++ +   G  PN VT+ ++I G  +A  F +A +FL+ + S G+APD   ++  I
Sbjct: 423 EACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFI 482

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADL 392
           + L K     + L   D +L+  + P +  +  +++ +     + L              
Sbjct: 483 ENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGL-------------- 528

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
                             A +++  M+ +G +PD  ++   +R  C   ++DEA NV   
Sbjct: 529 ------------------ATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTE 570

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR-----------------------AI 489
           +      V+A  +  ++D     G+  +A+ + +                         +
Sbjct: 571 MKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRL 630

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
            E  PL   S    I          + + L+  MK  +VP +A TY  +L  F +ER + 
Sbjct: 631 AEHVPLKATSVWKTI-------ELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLD 683

Query: 550 MVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            V  L+  + +  + L+      L     K    S A   L  M   G +P+
Sbjct: 684 EVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPN 735



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 96/454 (21%), Positives = 184/454 (40%), Gaps = 36/454 (7%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+  +FN  +   C+   +    D+   M  +GF  +   +  L+  FC+ GRI EA +L
Sbjct: 162 PDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALEL 221

Query: 243 -------------------------------LGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
                                          L  M  LG   +  A+  L+D + R ++ 
Sbjct: 222 FREMTQPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKA 281

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           + A  +  +M  +G  P VVT T ++  +      S A    + +  +G  P++  +N +
Sbjct: 282 EEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAI 341

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLE 387
           +      G    A+ + D + E  + PD  T+  L+   C+ G     F LL +L+ G  
Sbjct: 342 VQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLL-RLMEGNG 400

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
           + AD   YN L+   CK G  ++A  L++ +  +G  P++ +F  ++ GLC A K D A 
Sbjct: 401 LAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVAC 460

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
              + ++    A + + ++  ++ L +     + +      + +      V+YT+ I  L
Sbjct: 461 TFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRL 520

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
                   A  ++ QM      P+  TY   + ++C E  +   + ++ ++   R  +D 
Sbjct: 521 FNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDA 580

Query: 568 HTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
                L         +  AV  L  M  +  +P+
Sbjct: 581 MAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPN 614



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 88/400 (22%), Positives = 154/400 (38%), Gaps = 61/400 (15%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNV 204
           G   + +  N+++D L K G+VD    +    +     PN ++FN  +  LCK       
Sbjct: 400 GLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVA 459

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
              +  M+  G+ P+   +   +   CK     E    +  M+      S   +T++I+ 
Sbjct: 460 CTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINR 519

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
               R   +A  +W +MV  GCSP+VVTYT+ ++ +        A + +  ++      D
Sbjct: 520 LFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVD 579

Query: 325 LVFHNVLIDCLSKMGSYDDAL--------------------------------------- 345
            + +N LID  + +G  D A+                                       
Sbjct: 580 AMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKAT 639

Query: 346 ---------DVYD--GLLELKLVPDSY-TFCSLLSTVCLSGRFSLLPKLVCGLEVEA--- 390
                    DV++   L++   VP S  T+ S+L       R   +  LV  ++ E    
Sbjct: 640 SVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPL 699

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           +  +YNAL++ FCK    + A  L  +M+  GF P+   +  LL GL    + D A  ++
Sbjct: 700 NEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIF 759

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGR---CHKAIQLFRR 487
           +         +  V   I+D  I  G    CH  I +  +
Sbjct: 760 RSSRWKEYNTDEIVWKVIIDGFIRKGHADMCHDMISMLEQ 799



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 88/169 (52%), Gaps = 4/169 (2%)

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
             YNAL+   C+      A +  + M+  G+ PD ++F  L+ G C  ++++ A +++  
Sbjct: 130 ATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCK 189

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           +     + +A  + A+++   EAGR  +A++LFR    E    D+ ++   ++GL + GR
Sbjct: 190 MPFRGFSQDAVSYAALIEGFCEAGRIDEALELFR----EMTQPDMYTHAALVKGLCDAGR 245

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
            EE   +  +MK +   P    Y  ++  +C+E+  +  +++L ++ D+
Sbjct: 246 GEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDS 294



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/299 (22%), Positives = 120/299 (40%), Gaps = 48/299 (16%)

Query: 287 SPNVVTYTSLIK-----------------------------------GFMEAKMFSIAFS 311
           +P   TY +LI+                                   G+   +   +A  
Sbjct: 126 APTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHD 185

Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
               +   G + D V +  LI+   + G  D+AL+++  + +    PD YT  +L+  +C
Sbjct: 186 LFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQ----PDMYTHAALVKGLC 241

Query: 372 LSGRFSLLPKLVCGLEVEADL------VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
            +GR     + +C L+   +L        Y AL+  +C+     +A K+ N M D G  P
Sbjct: 242 DAGRGE---EGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMP 298

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
              +   ++   C   ++  A+ V++ +       N   + AIV     AG+ +KA+ L 
Sbjct: 299 CVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALL 358

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
            +        DVV+Y + IRG    G    A+ L   M+   +  + YTY V++ + CK
Sbjct: 359 DQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCK 417



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/247 (22%), Positives = 97/247 (39%), Gaps = 23/247 (9%)

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           I G++   GC     T+   +R Y              EM +     +  A N ++D   
Sbjct: 532 IWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHT 591

Query: 166 KIGRVDLGIKVLKE----TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
            IG+ D  + +LK       +PN  +F I L +L +     +V                 
Sbjct: 592 SIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVP---------------- 635

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
              +      K   +A+ ++L  LM       S   +  +++GF   RRLD    L   M
Sbjct: 636 ---LKATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLM 692

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
            +     N   Y +L+  F + +M+S A++ L  +   G  P+L+F+  L+  L+  G  
Sbjct: 693 KEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQA 752

Query: 342 DDALDVY 348
           D A +++
Sbjct: 753 DRAKEIF 759



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 72/414 (17%), Positives = 155/414 (37%), Gaps = 59/414 (14%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D  +++ +I  + + TG+ +    +   L   G    + TF   +    +   + +    
Sbjct: 404 DQYTYNVLIDALCK-TGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTF 462

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCK 197
            + M   G+ P+T+  +  ++ L K      G+    ++L++   P+ +++ I +  L  
Sbjct: 463 LENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFN 522

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
             +      + G MV +G  P+V  +   +  +C  GR+ EA  ++  M    T +   A
Sbjct: 523 ERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMA 582

Query: 258 WTVLIDGFRRLRRLD--------MAGY--------------------------------- 276
           +  LIDG   + + D        M G                                  
Sbjct: 583 YNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVW 642

Query: 277 ----------LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
                     L+E M +N    +  TY S+++GF E +      S + +++ E    +  
Sbjct: 643 KTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNED 702

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCG- 385
            +N L++C  K+  Y DA  +   ++    +P+   +  LLS +   G+     ++    
Sbjct: 703 IYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSS 762

Query: 386 --LEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
              E   D +V+  ++  F + G  +    + + +      P + ++  L   L
Sbjct: 763 RWKEYNTDEIVWKVIIDGFIRKGHADMCHDMISMLEQMKCKPSDETYAMLTEEL 816


>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
          Length = 426

 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 90/367 (24%), Positives = 184/367 (50%), Gaps = 6/367 (1%)

Query: 184 NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
           +  S+NI +  LC+ +       V+G M++ G+ P+V     L+N FC+  R+ +A  L+
Sbjct: 44  DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 103

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
             M  +G    V  +  +IDG  ++  ++ A  L+++M ++G   + VTY SL+ G   +
Sbjct: 104 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 163

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
             +S A   +  +      P+++    +ID   K G + +A+ +Y+ +    + PD +T+
Sbjct: 164 GRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTY 223

Query: 364 CSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
            SL++ +C+ GR     +++  +  +    D+V YN L++ FCK+   ++  KL+  M  
Sbjct: 224 NSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQ 283

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
           +G   D  ++  +++G   A + D A  ++  +   +   N   ++ ++  L    R  K
Sbjct: 284 RGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEK 340

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
           A+ LF      +  LD+ +Y + I G+ + G  E+A+ L+  +    + P+  +Y  M+ 
Sbjct: 341 ALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMIS 400

Query: 541 SFCKERN 547
            FC++R 
Sbjct: 401 GFCRKRQ 407



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 106/435 (24%), Positives = 207/435 (47%), Gaps = 28/435 (6%)

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M++    P++  F  +L+   K         L   M   G    + ++ ++I+   R  R
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
             +A  +  KM++ G  P+VVT +SLI GF +      A   +  +E  G  PD+V +N 
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---E 387
           +ID   K+G  +DA++++D +    +  D+ T+ SL++ +C SGR+S   +L+  +   +
Sbjct: 121 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
           +  +++ + A++  F K G  ++A+KLY  M  +   PD +++  L+ GLC   ++DEA 
Sbjct: 181 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 240

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            +   +V      +   +  +++   ++ R  +  +LFR         D ++Y   I+G 
Sbjct: 241 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGY 300

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
            + GR + A  ++S+M      PN  TY ++L   C    ++    L +++  + IELD 
Sbjct: 301 FQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELD- 356

Query: 568 HTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD--EMWRKLGL--LSDETMTPVSLFDG 623
                +T +    H           MC +G + D  +++R L    L  + ++  ++  G
Sbjct: 357 -----ITTYNIVIHG----------MCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISG 401

Query: 624 FVPCERRAGNANHLL 638
           F  C +R  + + LL
Sbjct: 402 F--CRKRQWDKSDLL 414



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 94/377 (24%), Positives = 185/377 (49%), Gaps = 6/377 (1%)

Query: 176 VLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGR 235
           +++   LP+ + F+  L  + K  +   V  +   M   G   ++  + I++NC C+  R
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60

Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
              A  ++G M+  G    V   + LI+GF +  R+  A  L  KM + G  P+VV Y +
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           +I G  +  + + A    D +E +G   D V +N L+  L   G + DA  +   ++   
Sbjct: 121 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180

Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAV 412
           +VP+  TF +++      G+FS   KL   +    V+ D+  YN+L++  C  G  ++A 
Sbjct: 181 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 240

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
           ++ + M+ KG  PD  ++  L+ G C ++++DE   +++ +       +   +  I+   
Sbjct: 241 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGY 300

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
            +AGR   A ++F R  ++  P ++ +Y++ + GL    R E+A +L+  M+   +  + 
Sbjct: 301 FQAGRPDAAQEIFSR--MDSRP-NIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDI 357

Query: 533 YTYRVMLLSFCKERNIK 549
            TY +++   CK  N++
Sbjct: 358 TTYNIVIHGMCKIGNVE 374



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/407 (23%), Positives = 193/407 (47%), Gaps = 10/407 (2%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFL 186
           + + Y +V+  F  M   G   + ++ NIV++ L +  R  + +    K++K    P+ +
Sbjct: 22  KSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVV 81

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           + +  +   C+ N V +  D++  M   GF P+V ++  +++  CK+G + +A +L   M
Sbjct: 82  TVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRM 141

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
              G       +  L+ G     R   A  L   MV     PNV+T+T++I  F++   F
Sbjct: 142 ERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKF 201

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
           S A    + +      PD+  +N LI+ L   G  D+A  + D ++    +PD  T+ +L
Sbjct: 202 SEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTL 261

Query: 367 LSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           ++  C S R     KL   +       D + YN ++  + +AG P+ A ++++ M  +  
Sbjct: 262 INGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR-- 319

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
            P+  ++  LL GLC   ++++A+ +++ +  +   ++   +  ++  + + G    A  
Sbjct: 320 -PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWD 378

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
           LFR    +    DVVSYT  I G     + +++ +LY +M+   + P
Sbjct: 379 LFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 94/378 (24%), Positives = 175/378 (46%), Gaps = 11/378 (2%)

Query: 81  HDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLE 140
           HD+ S++ +I+ + R + RF     +VG++ + G      T    +  + +G      ++
Sbjct: 43  HDLYSYNIVINCLCRCS-RFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAID 101

Query: 141 AFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLC 196
              +M   GF P+    N ++D   KIG V+  +++    +      + +++N  +  LC
Sbjct: 102 LVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLC 161

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
                S+   ++  MV +   PNV  F  +++ F K G+ +EA +L   M        V 
Sbjct: 162 CSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVF 221

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
            +  LI+G     R+D A  + + MV  GC P+VVTY +LI GF ++K           +
Sbjct: 222 TYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 281

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
              G   D + +N +I    + G  D A +++     +   P+  T+  LL  +C++ R 
Sbjct: 282 AQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFS---RMDSRPNIRTYSILLYGLCMNWRV 338

Query: 377 S---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
               +L + +   E+E D+  YN ++   CK G    A  L+ ++  KG  PD  S+  +
Sbjct: 339 EKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTM 398

Query: 434 LRGLCGARKIDEAINVYQ 451
           + G C  R+ D++  +Y+
Sbjct: 399 ISGFCRKRQWDKSDLLYR 416


>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 636

 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 108/398 (27%), Positives = 190/398 (47%), Gaps = 10/398 (2%)

Query: 136 GMVLEAF---DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP----NFLSF 188
           G V EA    D +   GF  + F+   +++ L KIG     +++L++        N + +
Sbjct: 152 GKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMY 211

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           N  + +LCK   V +  ++   M+ K   P+V  F  L+  FC +G++ EA+ L   M+ 
Sbjct: 212 NTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVL 271

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
              +     + +L+D   +   L  A  +   M++ G  PNVVTY+SL+ G+      + 
Sbjct: 272 KNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNK 331

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A   L+ +   G AP+   +  +I+   K+   D+AL +++ +    + PD  T+ SL+ 
Sbjct: 332 AKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLID 391

Query: 369 TVCLSGRFSLLPKLVCGLEVE---ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
            +C SGR S   +LV  +      A++  YN L+   CK    +QA+ L   + D+G  P
Sbjct: 392 GLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQP 451

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           D Y+F  L+ GLC   ++  A +V+Q ++    +VNA  +  +V+ L + G   +A  L 
Sbjct: 452 DMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALL 511

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM 523
            +        D V+Y   I+ L      E+A  L  +M
Sbjct: 512 SKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREM 549



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 109/452 (24%), Positives = 204/452 (45%), Gaps = 7/452 (1%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNV 204
           G TP+ F  NI+++    +  ++       K+LK    P+ ++FN  +  LC    V   
Sbjct: 98  GITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEA 157

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
                 ++  GF+ +   +  L+N  CK+G    A Q+L  +      ++V  +  +ID 
Sbjct: 158 LHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDS 217

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
             + + +  A  L+ +M+    SP+VVT+++LI GF        AF     +  +   PD
Sbjct: 218 LCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPD 277

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL-- 382
               N+L+D L K G+   A ++   +++  ++P+  T+ SL+   CL  + +    +  
Sbjct: 278 YYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLN 337

Query: 383 -VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
            +  +    +   Y  +++ FCK    ++A+ L+N M  KG  PD  ++  L+ GLC + 
Sbjct: 338 TISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSG 397

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYT 501
           +I  A  +   +  N    N   +  ++D L +     +AI L ++   +    D+ ++ 
Sbjct: 398 RISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFN 457

Query: 502 VAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
           + I GL + GR + A  ++  +       NA+TY +M+   CKE      + LL  + D 
Sbjct: 458 ILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDN 517

Query: 562 RIELDYHTSIRLTKFIFKFHSSSSAVNQLVEM 593
            I  D  T   L + +F    +  A   L EM
Sbjct: 518 GIIPDAVTYETLIQALFHKDENEKAEKLLREM 549



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/422 (21%), Positives = 196/422 (46%), Gaps = 3/422 (0%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+  +FNI +   C + +++    ++  +++ G+ P+   F  L+   C  G++ EA   
Sbjct: 101 PDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHF 160

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
              ++ LG  L   ++  LI+G  ++     A  +  K+       NVV Y ++I    +
Sbjct: 161 HDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCK 220

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
            K+   A+     + ++  +PD+V  + LI     +G  ++A  ++  ++   + PD YT
Sbjct: 221 HKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYT 280

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTML 419
           F  L+  +C  G       ++  +  E    ++V Y++L+  +C     N+A  + NT+ 
Sbjct: 281 FNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTIS 340

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
             G  P+ +S+  ++ G C  + +DEA++++  +     A +   + +++D L ++GR  
Sbjct: 341 QMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRIS 400

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
            A +L         P ++ +Y   I  L +    ++A  L  ++K   + P+ YT+ +++
Sbjct: 401 YAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILI 460

Query: 540 LSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLI 599
              CK   +K  + + QD++     ++  T   +   + K      A   L +M + G+I
Sbjct: 461 YGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGII 520

Query: 600 PD 601
           PD
Sbjct: 521 PD 522



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 137/275 (49%), Gaps = 6/275 (2%)

Query: 284 NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
           +G +P++ T+  LI  +      + AFS +  +   G+ PD +  N LI  L   G   +
Sbjct: 97  HGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKE 156

Query: 344 ALDVYDGLLELKLVPDSYTFCSLLSTVCLSG--RFSL-LPKLVCGLEVEADLVVYNALLS 400
           AL  +D +L L    D +++ +L++ +C  G  R +L + + + G  V+ ++V+YN ++ 
Sbjct: 157 ALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIID 216

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
             CK      A +LY+ M+ K  +PD  +F  L+ G C   +++EA  +++ +V+ N   
Sbjct: 217 SLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINP 276

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
           + +    +VD L + G    A  +    + E    +VV+Y+  + G     +  +A  + 
Sbjct: 277 DYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVL 336

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
           + +  +   PNA++Y  M+  FCK   IKMV   L
Sbjct: 337 NTISQMGAAPNAHSYCTMINGFCK---IKMVDEAL 368



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 115/251 (45%), Gaps = 13/251 (5%)

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
           +  D+  +N L++ +C     N A  +   +L  G+ PD  +F  L++GLC   K+ EA+
Sbjct: 99  ITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEAL 158

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
           + +  ++     ++   +  +++ L + G    A+Q+ R+   +   ++VV Y   I  L
Sbjct: 159 HFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSL 218

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
            +     +AY LYSQM    + P+  T+  ++  FC    ++    L ++++   I  DY
Sbjct: 219 CKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDY 278

Query: 568 HTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTPVSLFDGFVPC 627
           +T   L   + K  +   A N LV M   G++P+             +T  SL DG+   
Sbjct: 279 YTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPN------------VVTYSSLMDGYCLV 326

Query: 628 ERRAGNANHLL 638
             +   A H+L
Sbjct: 327 -NQVNKAKHVL 336


>gi|302759663|ref|XP_002963254.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
 gi|300168522|gb|EFJ35125.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
          Length = 495

 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 112/435 (25%), Positives = 198/435 (45%), Gaps = 17/435 (3%)

Query: 52  IVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELA 111
           ++H  L N  S  +A   F W A+Q D+ H V +++  ++ + +  G     R I  ++ 
Sbjct: 7   VIH-VLENIKSPKLASRVFKWAARQEDFEHTVFTYNAYLNALVK-GGHGSKARKIFDDML 64

Query: 112 RVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD 171
              C+    T+ + LR           LE   +M     TP TF  N+++  L K G+VD
Sbjct: 65  YKECLPNIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVD 124

Query: 172 LGIKVLK----ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILL 227
              ++ K    E  L + +S+N+    LCK + +     V G M      P++  +  LL
Sbjct: 125 AAYELYKRLSDECSL-DRISYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLL 183

Query: 228 NCFCKMGRIAEAYQLLGLMITLGTSLSV----NAWTVLIDGFRRLRRLDMAGYLWEKMVQ 283
             +C+ GR+ +A  LL  MI       V     ++  +I GF + R+L  A Y+  +M++
Sbjct: 184 YGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIK 243

Query: 284 NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
           +GCSPNVVT+ +L+ G         A +  + +      P  V + VLI   ++    D 
Sbjct: 244 SGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDK 303

Query: 344 ALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLS 400
           A D +  +L   + P+ YT+ +L+  +C + +      + K +     E ++V Y  ++ 
Sbjct: 304 ANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIG 363

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFT---PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
             CK G   +A KL+N  +        PD+Y++  ++  LC   K  EA   +  +V + 
Sbjct: 364 ALCKGGQIERATKLFNDAMGSRTAKCKPDSYAYSTIIYWLCRQSKFLEAYEYFLRMVESK 423

Query: 458 PAVNAHVHTAIVDRL 472
                H++ A+ D L
Sbjct: 424 LVAKPHIYKAMADGL 438



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 86/330 (26%), Positives = 140/330 (42%), Gaps = 41/330 (12%)

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  +++ M+   C PN+ TY  +++G  +      A   L  +ES+   P     N+L+ 
Sbjct: 56  ARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVS 115

Query: 334 CLSKMGSYDDALDVYDGLL----------------------------------ELKLVPD 359
           CL K G  D A ++Y  L                                   E  +VP 
Sbjct: 116 CLCKNGKVDAAYELYKRLSDECSLDRISYNMLTYGLCKADQIDRALAVFGEMEENAVVPS 175

Query: 360 SYTFCSLLSTVCLSGRF----SLLPKLV---CGLEVEADLVVYNALLSYFCKAGFPNQAV 412
             T+  LL   C +GR     +LL +++    G +V  D+  YN ++S FCKA     A 
Sbjct: 176 LLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTAR 235

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
            +   M+  G +P+  +F  LL GLC   K+DEA  +++ +V  N    A  +T ++   
Sbjct: 236 YVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGH 295

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
             A R  KA   F   +      +V +YT  I GL +  + E+A  +  +M      PN 
Sbjct: 296 ARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNV 355

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
            TY  ++ + CK   I+   +L  D + +R
Sbjct: 356 VTYTRVIGALCKGGQIERATKLFNDAMGSR 385



 Score = 42.0 bits (97), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 33/179 (18%), Positives = 69/179 (38%), Gaps = 9/179 (5%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           LTG+ +    +   +    C   A T+ + +  + R        + F +M R G  PN +
Sbjct: 262 LTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVY 321

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKET----QLPNFLSFNIALCNLCKLNDVSNV----KDV 207
               ++  L    +V+  +++LK      + PN +++   +  LCK   +        D 
Sbjct: 322 TYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFNDA 381

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
           +G    K   P+   +  ++   C+  +  EAY+    M+        + +  + DG  
Sbjct: 382 MGSRTAK-CKPDSYAYSTIIYWLCRQSKFLEAYEYFLRMVESKLVAKPHIYKAMADGLE 439


>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 105/399 (26%), Positives = 196/399 (49%), Gaps = 11/399 (2%)

Query: 136 GMVLEAF---DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ-----LPNFLS 187
           G V EA    D + R  F  +  +   +++ L K G     +++L++ +      P+ + 
Sbjct: 137 GKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIM 196

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           +   + + CK   V +  D+   M+ K  YPNV  F  L+  FC +G++ EA  LL  M 
Sbjct: 197 YTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMS 256

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
               + +V  + +LIDG  +   +  A  +   M++ G  PNVVTYTSL+ G+   K  +
Sbjct: 257 LNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVN 316

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A    + +   G  P++  ++V+I+ L K    D+A+ ++  +    + P++ T+ SL+
Sbjct: 317 KAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLI 376

Query: 368 STVCLSGRFSLLPKLVCGLEVE---ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
             +C SGR S +  L+  +      A+++ YN+LL+  CK    ++A+ L   M D+G  
Sbjct: 377 DGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQ 436

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           PD  ++  L+ GLC   ++ +A  +YQ ++     +N  ++T +++ L + G   +A+ L
Sbjct: 437 PDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSL 496

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM 523
             +        D V+Y   I  L +  +  +A  L  +M
Sbjct: 497 LSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREM 535



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 113/466 (24%), Positives = 208/466 (44%), Gaps = 43/466 (9%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLN 199
           +M   G  P  F  NI+++    + +++       K+LK    P+ ++ N  L  LC   
Sbjct: 78  QMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNG 137

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL----GLMITLGTSLSV 255
            V    +    ++RK F+ +   +  L+N  CK G    A QLL    GL++       V
Sbjct: 138 KVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLV---RPDV 194

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
             +T +ID F + + +  A  L+ +M+     PNVVT+ SLI GF        A   L+ 
Sbjct: 195 IMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNE 254

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
           +      P++   N+LID L K G    A                    S+LS +   G 
Sbjct: 255 MSLNNVNPNVYTFNILIDGLCKEGEVKKA-------------------TSVLSVMIKQG- 294

Query: 376 FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
                       VE ++V Y +L+  +      N+A  ++NT+  +G TP+ +S+  ++ 
Sbjct: 295 ------------VEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMIN 342

Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
           GLC  + +DEA+ +++ + + N   N   +++++D L ++GR      L         P 
Sbjct: 343 GLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPA 402

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
           ++++Y   + GL +  + ++A  L ++MK   + P+  TY  ++   CK   +K  +R+ 
Sbjct: 403 NIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIY 462

Query: 556 QDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           QD++     L+      +   + K      A++ L +M + G +PD
Sbjct: 463 QDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPD 508



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/329 (24%), Positives = 156/329 (47%), Gaps = 3/329 (0%)

Query: 167 IGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEIL 226
           I   DL  +++ +   PN ++FN  +   C +  +     ++  M      PNV  F IL
Sbjct: 211 IDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNIL 270

Query: 227 LNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGC 286
           ++  CK G + +A  +L +MI  G   +V  +T L+DG+  ++ ++ A +++  +   G 
Sbjct: 271 IDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGV 330

Query: 287 SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALD 346
           +PNV +Y+ +I G  + KM   A      +  +   P+ V ++ LID L K G   D  D
Sbjct: 331 TPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWD 390

Query: 347 VYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFC 403
           + D +       +  T+ SLL+ +C + +      L+  ++   ++ D+  Y  L+   C
Sbjct: 391 LIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLC 450

Query: 404 KAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAH 463
           K G    A ++Y  +L KG+  +   +  ++ GLC     DEA+++   +  N    +A 
Sbjct: 451 KNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAV 510

Query: 464 VHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
            +  ++  L +  +  KA++L R  I  +
Sbjct: 511 TYETLISALFKNNKNGKAVKLLREMIARE 539



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/314 (23%), Positives = 136/314 (43%), Gaps = 39/314 (12%)

Query: 284 NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
           N  +P +  +  ++   ++   F IA SF   +E +G  P++   N+LI+C S +   + 
Sbjct: 47  NNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNF 106

Query: 344 ALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR---------------------------- 375
           A  +   +L+L   PD+ T  +LL  +CL+G+                            
Sbjct: 107 AFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLIN 166

Query: 376 -----------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
                        LL K+   L V  D+++Y A++  FCK      A  LY+ M+ K   
Sbjct: 167 GLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIY 226

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           P+  +F  L+ G C   ++ EA+ +   + +NN   N +    ++D L + G   KA  +
Sbjct: 227 PNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSV 286

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
               I +    +VV+YT  + G        +A  +++ +    V PN ++Y VM+   CK
Sbjct: 287 LSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCK 346

Query: 545 ERNIKMVKRLLQDV 558
            + +    +L +++
Sbjct: 347 NKMVDEAVKLFKEM 360



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 99/211 (46%), Gaps = 4/211 (1%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           L       + +   ++  G      ++ + +    + +M    ++ F EM     TPNT 
Sbjct: 311 LVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTV 370

Query: 156 ARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
             + ++D L K GR+    DL  ++    Q  N +++N  L  LCK + V     ++  M
Sbjct: 371 TYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKM 430

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
             +G  P++  +  L++  CK GR+ +A ++   ++  G  L++  +TV+I+G  +    
Sbjct: 431 KDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFF 490

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           D A  L  +M  NGC P+ VTY +LI    +
Sbjct: 491 DEALSLLSQMEDNGCMPDAVTYETLISALFK 521


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 117/501 (23%), Positives = 219/501 (43%), Gaps = 7/501 (1%)

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
           + +V  + + +T    L    +   +G+ +E F++M   G  P+ +    V+  L ++  
Sbjct: 183 ITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKD 242

Query: 170 VDLGIKVLKETQLP----NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEI 225
           +    +++   +      N + +N+ +  LCK   V     +   +  K   P+V  +  
Sbjct: 243 LSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCT 302

Query: 226 LLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
           L+   CK+       +++  M+ L  S S  A + L++G R+  +++ A  L +++V  G
Sbjct: 303 LVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFG 362

Query: 286 CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL 345
            SPN+  Y +LI    + + F  A    D +   G  P+ V +++LID   + G  D AL
Sbjct: 363 VSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTAL 422

Query: 346 DVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYF 402
                +++  L    Y + SL++  C  G  S     +  +   ++E  +V Y +L+  +
Sbjct: 423 SFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGY 482

Query: 403 CKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNA 462
           C  G  N+A++LY+ M  KG  P  Y+F  LL GL  A  I +A+ ++  +   N   N 
Sbjct: 483 CSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNR 542

Query: 463 HVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQ 522
             +  +++   E G   KA +  +    +    D  SY   I GL   G+  EA +    
Sbjct: 543 VTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDG 602

Query: 523 MKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHS 582
           +       N   Y  +L  FC+E  ++    + Q+++   ++LD      L     K   
Sbjct: 603 LHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKD 662

Query: 583 SSSAVNQLVEMCNLGLIPDEM 603
                  L EM + GL PD++
Sbjct: 663 RKLFFGLLKEMHDRGLKPDDV 683



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 128/506 (25%), Positives = 215/506 (42%), Gaps = 50/506 (9%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE---TQLP-NFLSFNIALCNLCK 197
           FD MG+ G  PN    +I++D+  + G++D  +  L E   T L  +   +N  +   CK
Sbjct: 390 FDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCK 449

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
             D+S  +  +  M+ K   P V  +  L+  +C  G+I +A +L   M   G + S+  
Sbjct: 450 FGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYT 509

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T L+ G  R   +  A  L+ +M +    PN VTY  +I+G+ E    S AF FL  + 
Sbjct: 510 FTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMT 569

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
            +G  PD   +  LI  L   G   +A    DGL +     +   +  LL   C  G+  
Sbjct: 570 EKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLE 629

Query: 378 -------------LLPKLVC------------------GLEVE-------ADLVVYNALL 399
                        +   LVC                  GL  E        D V+Y +++
Sbjct: 630 EALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMI 689

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
               K G   +A  +++ M+++G  P+  ++  ++ GLC A  ++EA  +   +   +  
Sbjct: 690 DAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSV 749

Query: 460 VNAHVHTAIVDRLIEAG-RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
            N   +   +D L +      KA++L   AI++    +  +Y + IRG    GR EEA  
Sbjct: 750 PNQVTYGCFLDILTKGEVDMQKAVEL-HNAILKGLLANTATYNMLIRGFCRQGRIEEASE 808

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD---YHTSIRLTK 575
           L ++M    V P+  TY  M+   C+  ++K    L   + +  I  D   Y+T I    
Sbjct: 809 LITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCC 868

Query: 576 FIFKFHSSSSAVNQLVEMCNLGLIPD 601
              +   ++   N   EM   GLIP+
Sbjct: 869 VAGEMGKATELRN---EMLRQGLIPN 891



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 106/449 (23%), Positives = 198/449 (44%), Gaps = 11/449 (2%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G      G + E+          T+   +  Y         L  + EM   G  P+ +  
Sbjct: 451 GDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTF 510

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
             ++  LF+ G +   +K+  E       PN +++N+ +   C+  D+S   + +  M  
Sbjct: 511 TTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTE 570

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           KG  P+   +  L++  C  G+ +EA   +  +      L+   +T L+ GF R  +L+ 
Sbjct: 571 KGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEE 630

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  + ++MVQ G   ++V Y  LI G ++ K   + F  L  +   G  PD V +  +ID
Sbjct: 631 ALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMID 690

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCG----LEVE 389
             SK G + +A  ++D ++    VP+  T+ ++++ +C +G F    +++C     +   
Sbjct: 691 AKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAG-FVNEAEVLCSKMQPVSSV 749

Query: 390 ADLVVYNALLSYFCKAGFPNQ-AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
            + V Y   L    K     Q AV+L+N +L KG   +  ++  L+RG C   +I+EA  
Sbjct: 750 PNQVTYGCFLDILTKGEVDMQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEASE 808

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           +   ++ +  + +   +T +++ L       KAI+L+     +    D V+Y   I G  
Sbjct: 809 LITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCC 868

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
             G   +A  L ++M    + PN  T R 
Sbjct: 869 VAGEMGKATELRNEMLRQGLIPNNKTSRT 897



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 100/415 (24%), Positives = 178/415 (42%), Gaps = 36/415 (8%)

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCN 194
           LE  DEM    F+P+  A + +++ L K G+++  + ++K        PN   +N  + +
Sbjct: 317 LEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDS 376

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           LCK       + +   M + G  PN   + IL++ FC+ G++  A   LG M+  G  LS
Sbjct: 377 LCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLS 436

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           V  +  LI+G  +   +  A     +M+     P VVTYTSL+ G+      + A     
Sbjct: 437 VYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYH 496

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            +  +G AP +     L+  L + G   DA+ +++ + E  + P+               
Sbjct: 497 EMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNR-------------- 542

Query: 375 RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
                             V YN ++  +C+ G  ++A +    M +KG  PD YS+  L+
Sbjct: 543 ------------------VTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLI 584

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            GLC   +  EA     G+   N  +N   +T ++      G+  +A+ + +  +     
Sbjct: 585 HGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVD 644

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
           LD+V Y V I G L+    +  + L  +M    + P+   Y  M+ +  K  + K
Sbjct: 645 LDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFK 699


>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
 gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 121/489 (24%), Positives = 210/489 (42%), Gaps = 48/489 (9%)

Query: 160 VMDVLFKIGRVDLG---------IKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGM 210
           V D LF +  V+LG         +++ K   LP   S N  L  L K  +    +D    
Sbjct: 64  VFDALFSV-LVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRD 122

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           MV  G  P V  + I++   CK G +  A  L   M  +G +  +  +  LIDG+ ++  
Sbjct: 123 MVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGL 182

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           LD +  L+E+M   GC P+V+TY +LI  F + K    AF F   ++ +   P+++ ++ 
Sbjct: 183 LDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYST 242

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLE 387
           LID L K G    A+  +  +  + L+P+ +T+ SL+   C +G      +L   +    
Sbjct: 243 LIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEH 302

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
           V+ ++V Y  LL   C+ G  N+A +L+  M   G TP+  ++  L+ G    R +D+A+
Sbjct: 303 VDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAM 362

Query: 448 NVYQ------------------------------GIVM-----NNPAVNAHVHTAIVDRL 472
            ++                                I+M     +    N  ++T ++D  
Sbjct: 363 ELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAY 422

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
            +AG   +AI L          + VV++   I GL + G  +EA   + +M    + PN 
Sbjct: 423 FKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNV 482

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVE 592
             Y  ++   CK   I   K+L  ++ D  +  D      +     K  +   A+N   +
Sbjct: 483 AVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNK 542

Query: 593 MCNLGLIPD 601
           M  +G+  D
Sbjct: 543 MMEMGIELD 551



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 111/465 (23%), Positives = 213/465 (45%), Gaps = 7/465 (1%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
           F++M + G TP+    N ++D   KIG +D  + + +E +     P+ +++N  + + CK
Sbjct: 155 FEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCK 214

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              +    +    M  K   PNV  +  L++  CK G +  A +    M  +G   +   
Sbjct: 215 FKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFT 274

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           ++ LID   +   L  A  L ++M+Q     N+VTYT+L+ G  E  M + A      + 
Sbjct: 275 YSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMG 334

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G  P+L  +  LI    K+ S D A+++++ + E  + PD   + +++  +C   +  
Sbjct: 335 KAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLE 394

Query: 378 LLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
               ++  ++   + A+ V+Y  L+  + KAG   +A+ L   M D G      +F  L+
Sbjct: 395 ECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALI 454

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            GLC    + EAI  +  +  ++   N  V+TA++D L +      A +LF     +   
Sbjct: 455 DGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMI 514

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
            D ++YT  I G L+ G  +EA  + ++M  + +  + Y Y  ++    +   ++  ++ 
Sbjct: 515 PDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKF 574

Query: 555 LQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLI 599
           L ++I   I  D     RL +  ++  +   A+    E+   GLI
Sbjct: 575 LAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKGLI 619



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 100/472 (21%), Positives = 204/472 (43%), Gaps = 19/472 (4%)

Query: 77  RDYFHD---------VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLR 127
           RD+F D         V +++ MI  V +  G   T R +  ++ ++G      T+   + 
Sbjct: 117 RDFFRDMVGAGIAPTVFTYNIMIGHVCK-EGDMLTARSLFEQMKKMGLTPDIVTYNTLID 175

Query: 128 IYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LP 183
            Y +  +    +  F+EM   G  P+    N +++   K   +    +  +E +     P
Sbjct: 176 GYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKP 235

Query: 184 NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
           N +S++  +  LCK   +         M R G  PN   +  L++  CK G + EA+ L 
Sbjct: 236 NVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLA 295

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
             M+     L++  +T L+DG      ++ A  L+  M + G +PN+  YT+LI G ++ 
Sbjct: 296 DEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKV 355

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
           +    A    + +  +   PD++    ++  L      ++   +   + E  +  +   +
Sbjct: 356 RSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIY 415

Query: 364 CSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
            +L+     +G      +LL ++   L  E  +V + AL+   CK G   +A+  +  M 
Sbjct: 416 TTLMDAYFKAGNRTEAINLLEEMR-DLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMP 474

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
           D    P+   +  L+ GLC    I +A  ++  +   N   +   +TA++D  ++ G   
Sbjct: 475 DHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQ 534

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
           +A+ +  + +     LD+ +YT  + GL + G+ ++A    ++M    + P+
Sbjct: 535 EALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPD 586



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 141/302 (46%), Gaps = 10/302 (3%)

Query: 136 GMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSF 188
           GM+ EA   F  MG+ G TPN  A   ++    K+  +D  +++  E +     P+ L +
Sbjct: 321 GMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLW 380

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
              +  LC  + +   K ++  M   G   N  ++  L++ + K G   EA  LL  M  
Sbjct: 381 GTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRD 440

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
           LGT ++V  +  LIDG  +   +  A Y + +M  +   PNV  YT+LI G  +      
Sbjct: 441 LGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGD 500

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A    D ++ +   PD + +  +ID   K G++ +AL++ + ++E+ +  D Y + SL+ 
Sbjct: 501 AKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVW 560

Query: 369 TVCLSGRFSLLPKLVC---GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
            +   G+     K +    G  +  D  +   LL    + G  ++A++L N +++KG   
Sbjct: 561 GLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKGLIH 620

Query: 426 DN 427
            N
Sbjct: 621 GN 622


>gi|242067351|ref|XP_002448952.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
 gi|241934795|gb|EES07940.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
          Length = 455

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/360 (26%), Positives = 181/360 (50%), Gaps = 5/360 (1%)

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
           +S + D++ +MV  G  PN  +F I  + + K G I +A  +   M   G S    ++  
Sbjct: 11  LSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAVSYGA 70

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME-AKMFSIAFSFLDMLESE 319
           LID   +L R+D A   + +M+  G +PN+V ++SL+ G     K   +   F +ML   
Sbjct: 71  LIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVG 130

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
            H P++VF N ++  L K G   +   + D +  + + PD  ++ +L+   CL+G     
Sbjct: 131 IH-PNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEA 189

Query: 380 PKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
            KL+ G+    ++ +   YN LL  +CKAG  + A  L+  ML  G TP   ++  +L G
Sbjct: 190 SKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHG 249

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
           L   ++  EA  +Y  ++ +      + +  I++ L ++    +A ++F+    +   L+
Sbjct: 250 LFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLN 309

Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
           ++++T+ I  LL+GGR E+A  L++ +    + P+  TYRV+  +  +E +++    L  
Sbjct: 310 IITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFS 369



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 89/368 (24%), Positives = 174/368 (47%), Gaps = 9/368 (2%)

Query: 122 FLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVL 177
           F +F   Y +  M    ++ F++M + G +P+  +   ++D L K+GRVD       +++
Sbjct: 33  FNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMI 92

Query: 178 KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIA 237
            E   PN + F+  +  LC ++    V+++   M+  G +PN+  F  +L   CK GR+ 
Sbjct: 93  NEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVM 152

Query: 238 EAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLI 297
           E  +L+  +  +G    V ++  LIDG      +D A  L E MV  G  PN  +Y +L+
Sbjct: 153 EGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLL 212

Query: 298 KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
            G+ +A     A+S    + S G  P +V +N ++  L +   + +A ++Y  ++     
Sbjct: 213 HGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTK 272

Query: 358 PDSYTFCSLLSTVCLSG----RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVK 413
              YT+ ++L+ +C S      F +   L C   ++ +++ +  ++    K G    A+ 
Sbjct: 273 WGIYTYNTILNGLCKSNCVDEAFKMFQSL-CSKGLQLNIITFTIMIGALLKGGRKEDAMD 331

Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
           L+  +   G  PD  ++  +   L     ++E  +++  +  N  A N+ +  A+V RL+
Sbjct: 332 LFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLL 391

Query: 474 EAGRCHKA 481
             G   +A
Sbjct: 392 HRGDISRA 399



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/371 (25%), Positives = 165/371 (44%), Gaps = 8/371 (2%)

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           MV NG SPN   +      + +  M   A    + +   G +PD V +  LID L K+G 
Sbjct: 21  MVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAVSYGALIDALCKLGR 80

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNA 397
            DDA   ++ ++   + P+   F SL+  +C   ++  + +L   +  + +  ++V +N 
Sbjct: 81  VDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVGIHPNIVFFNT 140

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
           +L   CK G   +  +L +++   G  PD  S+  L+ G C A  IDEA  + +G+V   
Sbjct: 141 ILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVG 200

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAY 517
              N+  +  ++    +AGR   A  LFR+ +       VV+Y   + GL +  R  EA 
Sbjct: 201 LKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAK 260

Query: 518 ILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFI 577
            LY  M +       YTY  +L   CK   +    ++ Q +    ++L+  T   +   +
Sbjct: 261 ELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGAL 320

Query: 578 FKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTPVSL--FDGFVPCERRAGNA- 634
            K      A++    +   GL+PD +  +  ++++  +   SL  FD       + G A 
Sbjct: 321 LKGGRKEDAMDLFAAIPANGLVPDVVTYR--VVAENLIEEGSLEEFDSLFSAMEKNGTAP 378

Query: 635 NHLLLNGGVGR 645
           N  +LN  V R
Sbjct: 379 NSQMLNALVRR 389



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 13/226 (5%)

Query: 134 MYGMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVD----LGIKVLKETQLPNFL 186
           + G + EA    + M   G  PN+F+ N ++    K GR+D    L  K+L     P  +
Sbjct: 182 LAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVV 241

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           ++N  L  L +    S  K++   M+  G    +  +  +LN  CK   + EA+++   +
Sbjct: 242 TYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSL 301

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
            + G  L++  +T++I    +  R + A  L+  +  NG  P+VVTY  + +  +E    
Sbjct: 302 CSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSL 361

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCL------SKMGSYDDALD 346
               S    +E  G AP+    N L+  L      S+ G+Y   LD
Sbjct: 362 EEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLD 407



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/259 (21%), Positives = 101/259 (38%), Gaps = 5/259 (1%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV S++ +I     L G  +    ++  +  VG    + ++   L  Y +          
Sbjct: 169 DVISYNTLIDGHC-LAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSL 227

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCK 197
           F +M   G TP     N ++  LF+  R     +L + ++         ++N  L  LCK
Sbjct: 228 FRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCK 287

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            N V     +   +  KG   N+  F I++    K GR  +A  L   +   G    V  
Sbjct: 288 SNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVT 347

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           + V+ +       L+    L+  M +NG +PN     +L++  +     S A ++L  L+
Sbjct: 348 YRVVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLD 407

Query: 318 SEGHAPDLVFHNVLIDCLS 336
               + +    ++LI   S
Sbjct: 408 ERNFSVEASTTSMLISIFS 426


>gi|302785562|ref|XP_002974552.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
 gi|300157447|gb|EFJ24072.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
          Length = 495

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 112/435 (25%), Positives = 198/435 (45%), Gaps = 17/435 (3%)

Query: 52  IVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELA 111
           ++H  L N  S  +A   F W A+Q D+ H V +++  ++ + +  G     R I  ++ 
Sbjct: 7   VIH-VLENIKSPKLASRVFKWAARQEDFQHTVFTYNAYLNALVK-GGHGSKARKIFDDML 64

Query: 112 RVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD 171
              C+    T+ + LR           LE   +M     TP TF  N+++  L K G+VD
Sbjct: 65  YKECLPNIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVD 124

Query: 172 LGIKVLK----ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILL 227
              ++ K    E  L + +S+N+    LCK + +     V G M      P++  +  LL
Sbjct: 125 AAYELYKRLSDECSL-DRISYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLL 183

Query: 228 NCFCKMGRIAEAYQLLGLMITLGTSLSV----NAWTVLIDGFRRLRRLDMAGYLWEKMVQ 283
             +C+ GR+ +A  LL  MI       V     ++  +I GF + R+L  A Y+  +M++
Sbjct: 184 YGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIK 243

Query: 284 NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
           +GCSPNVVT+ +L+ G         A +  + +      P  V + VLI   ++    D 
Sbjct: 244 SGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDK 303

Query: 344 ALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLS 400
           A D +  +L   + P+ YT+ +L+  +C + +      + K +     E ++V Y  ++ 
Sbjct: 304 ANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIG 363

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFT---PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
             CK G   +A KL+N  +        PD+Y++  ++  LC   K  EA   +  +V + 
Sbjct: 364 ALCKGGQIERATKLFNDAMGSRTAKCKPDSYAYSTIVYWLCRQSKFLEAYEYFLRMVESK 423

Query: 458 PAVNAHVHTAIVDRL 472
                H++ A+ D L
Sbjct: 424 LVAKPHIYKAMADGL 438



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 86/330 (26%), Positives = 140/330 (42%), Gaps = 41/330 (12%)

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  +++ M+   C PN+ TY  +++G  +      A   L  +ES+   P     N+L+ 
Sbjct: 56  ARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVS 115

Query: 334 CLSKMGSYDDALDVYDGLL----------------------------------ELKLVPD 359
           CL K G  D A ++Y  L                                   E  +VP 
Sbjct: 116 CLCKNGKVDAAYELYKRLSDECSLDRISYNMLTYGLCKADQIDRALAVFGEMEENAVVPS 175

Query: 360 SYTFCSLLSTVCLSGRF----SLLPKLV---CGLEVEADLVVYNALLSYFCKAGFPNQAV 412
             T+  LL   C +GR     +LL +++    G +V  D+  YN ++S FCKA     A 
Sbjct: 176 LLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTAR 235

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
            +   M+  G +P+  +F  LL GLC   K+DEA  +++ +V  N    A  +T ++   
Sbjct: 236 YVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGH 295

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
             A R  KA   F   +      +V +YT  I GL +  + E+A  +  +M      PN 
Sbjct: 296 ARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNV 355

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
            TY  ++ + CK   I+   +L  D + +R
Sbjct: 356 VTYTRVIGALCKGGQIERATKLFNDAMGSR 385


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/410 (23%), Positives = 191/410 (46%), Gaps = 18/410 (4%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCKLNDVSNV 204
           G  P+  A   ++    + G+     ++++       +P+ +++N+ +   CK  ++   
Sbjct: 136 GDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKA 195

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
            +V+  M      P+V  +  +L   C  G++ EA ++L   +       V  +T+LI+ 
Sbjct: 196 LEVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEA 252

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
                 +  A  L ++M + GC P+VVTY  LI G  +      A  FL+ + S G  P+
Sbjct: 253 TCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPN 312

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC---LSGR----FS 377
           ++ HN+++  +   G + DA  +   +L     P   TF  L++ +C   L GR      
Sbjct: 313 VITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLE 372

Query: 378 LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
            +PK  C      + + YN LL  FC+    ++A++    M+ +G  PD  ++  LL  L
Sbjct: 373 KMPKHGC----VPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTAL 428

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
           C   K+D A+ +   +     +     +  ++D L + G+   A++L      +    D+
Sbjct: 429 CKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDI 488

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN 547
           ++Y+  +RGL   G+ +EA  ++  M+ +++ P+A TY  ++L  CK + 
Sbjct: 489 ITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQ 538



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 103/455 (22%), Positives = 207/455 (45%), Gaps = 10/455 (2%)

Query: 155 FARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGM 210
           FA NI +  L + G ++ G+K L+    +  +P+ ++    +   C+         ++ +
Sbjct: 107 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEI 166

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           +   G  P+V  + +L+  +CK G I +A ++L  M     +  V  +  ++       +
Sbjct: 167 LENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGK 223

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           L  A  + ++ +Q  C P+V+TYT LI+          A   LD +  +G  PD+V +NV
Sbjct: 224 LKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV 283

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---E 387
           LI+ + K G  D+A+   + +      P+  T   +L ++C +GR+    +L+  +    
Sbjct: 284 LINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKG 343

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
               +V +N L+++ C+     +A+ +   M   G  P++ S+  LL G C  +K+D AI
Sbjct: 344 CSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAI 403

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
              + +V      +   +  ++  L + G+   A+++  +   +     +++Y   I GL
Sbjct: 404 EYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGL 463

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
            + G+TE A  L  +M+   + P+  TY  +L    +E  +    ++  D+    I+   
Sbjct: 464 TKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSA 523

Query: 568 HTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
            T   +   + K   +S A++ L  M   G  P E
Sbjct: 524 VTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTE 558



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 170/348 (48%), Gaps = 7/348 (2%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           +G+ +    ++    +  C     T+ + +         G  ++  DEM + G  P+   
Sbjct: 221 SGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVT 280

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N++++ + K GR+D  IK L         PN ++ NI L ++C      + + ++  M+
Sbjct: 281 YNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDML 340

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
           RKG  P+V  F IL+N  C+   +  A  +L  M   G   +  ++  L+ GF + +++D
Sbjct: 341 RKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMD 400

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A    E MV  GC P++VTY +L+    +      A   L+ L S+G +P L+ +N +I
Sbjct: 401 RAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVI 460

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVE 389
           D L+K+G  + A+++ + +    L PD  T+ +LL  +   G+     K+   + GL ++
Sbjct: 461 DGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIK 520

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
              V YNA++   CKA   ++A+     M++KG  P   ++  L+ G+
Sbjct: 521 PSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGI 568



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/159 (23%), Positives = 74/159 (46%), Gaps = 11/159 (6%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGC---VIKAQTFLLFLRIYWRG 132
            R  + D+ +++ +++ + +  G+ +    I+ +L+  GC   +I   T +  L    + 
Sbjct: 411 SRGCYPDIVTYNTLLTALCK-DGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKT 469

Query: 133 EMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSF 188
           E     +E  +EM R G  P+    + ++  L + G+VD  IK+  + +     P+ +++
Sbjct: 470 EY---AVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTY 526

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILL 227
           N  +  LCK    S   D +  MV KG  P    + IL+
Sbjct: 527 NAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILI 565


>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1010

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 119/447 (26%), Positives = 199/447 (44%), Gaps = 18/447 (4%)

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           + +  VL  +G V+  I+   + +     P   S N  L    KL     VK     M+ 
Sbjct: 29  DALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIG 88

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G  P V  + I+++C CK G +  A  L   M   G       +  +IDGF ++ RLD 
Sbjct: 89  AGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDD 148

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
               +E+M    C P+V+TY +LI  F +         F   ++  G  P++V ++ L+D
Sbjct: 149 TVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVD 208

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEA 390
              K G    A+  Y  +  + LVP+ YT+ SL+   C  G  S    L   +  + VE 
Sbjct: 209 AFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEW 268

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           ++V Y AL+   C    P + + L + M++        +F  L+ GLC  + + +AI+ Y
Sbjct: 269 NVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAID-Y 327

Query: 451 QGIVMNNPAV--NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
            G + N+  +  NA ++TA++D L +  +   A  LF +   +    D  +YT  + G  
Sbjct: 328 FGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNF 387

Query: 509 EGGRTEEAYILYSQMKHIAVPPN--AYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           + G   EA  L  +M    +  +  AYT  V  LS C +  ++  +  L+++I   I   
Sbjct: 388 KQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQ--LQKARSFLEEMIGEGI--- 442

Query: 567 YHTSIRLTKFIFKFHSSSSAVNQLVEM 593
            H    L   + K H     +N+ VE+
Sbjct: 443 -HPDEVLCISVLKKHYELGCINEAVEL 468



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 105/427 (24%), Positives = 180/427 (42%), Gaps = 6/427 (1%)

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
           +P F  F+     L  L  V         M R   +P  R    LL+ F K+G+     +
Sbjct: 22  VPGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKR 81

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
               MI  G   +V  + ++ID   +   ++ A  L+E+M   G  P+ VTY S+I GF 
Sbjct: 82  FFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFG 141

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           +         F + ++     PD++ +N LI+C  K G     L+ +  +    L P+  
Sbjct: 142 KVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVV 201

Query: 362 TFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           ++ +L+   C  G      K    +    +  +   Y +L+  +CK G  + A +L N M
Sbjct: 202 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEM 261

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
           L  G   +  ++  L+ GLCG     E +++   +V  +  V       ++D L +    
Sbjct: 262 LQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLV 321

Query: 479 HKAIQLFRRAIVEKYPL--DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
            KAI  F R I   + L  +   YT  I GL +G + E A  L+ QM    + P+   Y 
Sbjct: 322 SKAIDYFGR-ISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYT 380

Query: 537 VMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNL 596
            ++    K+ N+     L   +++  ++LD      L   +   +    A + L EM   
Sbjct: 381 SLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGE 440

Query: 597 GLIPDEM 603
           G+ PDE+
Sbjct: 441 GIHPDEV 447



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 107/449 (23%), Positives = 188/449 (41%), Gaps = 10/449 (2%)

Query: 86  FDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEM 145
           FD + SV+  L G  E       ++ R     K ++    L  + +      V   F +M
Sbjct: 28  FDALFSVLIDL-GMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDM 86

Query: 146 GRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDV 201
              G  P  F  NI++D + K G V+    + +E +    +P+ +++N  +    K+  +
Sbjct: 87  IGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRL 146

Query: 202 SNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVL 261
            +       M      P+V  +  L+NCFCK G++ +  +    M   G   +V +++ L
Sbjct: 147 DDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTL 206

Query: 262 IDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH 321
           +D F +   +  A   +  M + G  PN  TYTSLI  + +    S AF   + +   G 
Sbjct: 207 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGV 266

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC----LSGRFS 377
             ++V +  LID L    +  + L + D ++EL +     TFC L+  +C    +S    
Sbjct: 267 EWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAID 326

Query: 378 LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
              ++     ++A+  +Y A++   CK      A  L+  M  KG  PD  ++  L+ G 
Sbjct: 327 YFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGN 386

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
                + EA+ +   +V     ++   +T++V  L    +  KA       I E    D 
Sbjct: 387 FKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDE 446

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQ-MKH 525
           V     ++   E G   EA  L S  MKH
Sbjct: 447 VLCISVLKKHYELGCINEAVELQSYLMKH 475



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 80/379 (21%), Positives = 138/379 (36%), Gaps = 61/379 (16%)

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           D+   LW    +N C P    + +L    ++  M   A      ++     P     N L
Sbjct: 9   DVFDVLWS--TRNVCVPGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGL 66

Query: 332 IDCLSKMGSYDDA-------------------------------LDVYDGLLE----LKL 356
           +   +K+G  D                                 ++   GL E      L
Sbjct: 67  LHKFAKLGKTDGVKRFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGL 126

Query: 357 VPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE------VEADLVVYNALLSYFCKAGFPNQ 410
           +PD+ T+ S++      G+   L   VC  E       E D++ YNAL++ FCK G   +
Sbjct: 127 IPDTVTYNSMIDGF---GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPK 183

Query: 411 AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
            ++ +  M   G  P+  S+  L+   C    + +AI  Y  +       N + +T+++D
Sbjct: 184 GLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 243

Query: 471 RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
              + G    A +L    +      +VV+YT  I GL       E   L  +M  + +  
Sbjct: 244 AYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKV 303

Query: 531 NAYTYRVMLLSFCKERNIKMVKRLLQDVID--ARIELDYHTSIRLTKF------IFKFHS 582
              T+ V++   CK        +L+   ID   RI  D+        +      + K + 
Sbjct: 304 TVVTFCVLIDGLCK-------NKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQ 356

Query: 583 SSSAVNQLVEMCNLGLIPD 601
             +A     +M   GL+PD
Sbjct: 357 VEAATTLFEQMAQKGLVPD 375



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 115/257 (44%), Gaps = 11/257 (4%)

Query: 109 ELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF---DEMGRFGFTPNTFARNIVMDVLF 165
           ++ RVG V    T+   +  Y +    G + +AF   +EM + G   N      ++D L 
Sbjct: 225 DMRRVGLVPNEYTYTSLIDAYCK---IGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLC 281

Query: 166 KIGRVDLGIKVLKE-TQLP---NFLSFNIALCNLCKLNDVSNVKDVIGMMVRK-GFYPNV 220
                  G+ +L E  +L      ++F + +  LCK   VS   D  G +    G   N 
Sbjct: 282 GWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANA 341

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
            ++  +++  CK  ++  A  L   M   G      A+T L+DG  +   +  A  L +K
Sbjct: 342 AIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDK 401

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           MV+ G   +++ YTSL+ G         A SFL+ +  EG  PD V    ++    ++G 
Sbjct: 402 MVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGC 461

Query: 341 YDDALDVYDGLLELKLV 357
            ++A+++   L++ +L+
Sbjct: 462 INEAVELQSYLMKHQLL 478


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 113/458 (24%), Positives = 197/458 (43%), Gaps = 9/458 (1%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNL 195
           E FD M   G  P     N ++ +  K+ + +    L  ++ +        +FNI +  L
Sbjct: 187 ECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVL 246

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
           CK   +   KD IG M   G  PNV  +  +++ +C  GR+  A  +L +M   G     
Sbjct: 247 CKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDS 306

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
             +  LI G  +  +L+ A  + EKM + G  P  VTY +LI G+        AF + D 
Sbjct: 307 YTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDE 366

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
           +      P +  +N+LI  L   G  D+A  +   + +  +VPDS T+  L++  C  G 
Sbjct: 367 MVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGN 426

Query: 376 ----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
               F+L  +++    ++  LV Y +L+    K      A  L+  ++ +G +PD   F 
Sbjct: 427 AKKAFNLHDEMISK-GIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFN 485

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            L+ G C    +D A  + + +   N   +   +  ++      G+  +A +L +     
Sbjct: 486 ALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRR 545

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
               D +SY   I G  + G   +A+ +  +M  I   P   TY  ++   CK +   + 
Sbjct: 546 GIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLA 605

Query: 552 KRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQ 589
           + LL++++   I  D  T   L + I K   SS A + 
Sbjct: 606 EELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEASDS 643



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 99/453 (21%), Positives = 189/453 (41%), Gaps = 38/453 (8%)

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           F++ +   C+L    +  +   MM  KG  P +  F  +L+ F K+ +    + L   M 
Sbjct: 169 FDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMF 228

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
            L    +V  + ++I+   +  +L  A      M   G  PNVVTY ++I G+       
Sbjct: 229 RLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVE 288

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A   LD++++ G  PD   +  LI  + K G  ++A  + + + E+ L+P + T+ +L+
Sbjct: 289 GARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLI 348

Query: 368 STVCLSG-------------RFSLLPK------LVCGLEVEA------------------ 390
              C  G             R ++LP       L+  L +E                   
Sbjct: 349 DGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIV 408

Query: 391 -DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            D + YN L++ +C+ G   +A  L++ M+ KG  P   ++  L+  L    ++  A ++
Sbjct: 409 PDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDL 468

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
           ++ I+    + +  +  A++D     G   +A  L +         D V+Y   ++G   
Sbjct: 469 FEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCR 528

Query: 510 GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
            G+ EEA  L  +MK   + P+  +Y  ++  + K  +I     +  +++         T
Sbjct: 529 EGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLT 588

Query: 570 SIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
              L + + K      A   L EM + G+ PD+
Sbjct: 589 YNALIQGLCKNQQGDLAEELLKEMVSKGITPDD 621



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/422 (22%), Positives = 180/422 (42%), Gaps = 43/422 (10%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           K++     +++F+ M+S+  +L  + ETV  +  E+ R+       TF + + +  +   
Sbjct: 193 KEKGVVPKIETFNAMLSLFLKLN-QTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGK 251

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD---LGIKVLKETQL-PNFLSFNI 190
                +    M   G  PN    N V+      GRV+   + + ++K   + P+  ++  
Sbjct: 252 LKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGS 311

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEA----------- 239
            +  +CK   +     ++  M   G  P    +  L++ +C  G + +A           
Sbjct: 312 LISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRA 371

Query: 240 -------YQLL--------------GLMITLGTSLSVN---AWTVLIDGFRRLRRLDMAG 275
                  Y LL              G++  +G S  V     + +LI+G+ R      A 
Sbjct: 372 ILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAF 431

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
            L ++M+  G  P +VTYTSLI    +      A    + +  EG +PDL+  N LID  
Sbjct: 432 NLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGH 491

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADL 392
              G+ D A  +   + +  +VPD  T+ +L+   C  G+     +L+  ++   +  D 
Sbjct: 492 CANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDH 551

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           + YN L+S + K G  N A  + + ML  GF P   ++  L++GLC  ++ D A  + + 
Sbjct: 552 ISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKE 611

Query: 453 IV 454
           +V
Sbjct: 612 MV 613



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 97/442 (21%), Positives = 181/442 (40%), Gaps = 43/442 (9%)

Query: 201 VSNVKDVIGMMV----RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
           V+ VKDV   +     R G   ++ +F++L+   C++ R  +A++   +M   G    + 
Sbjct: 144 VAGVKDVFHELAITRDRLGTKSSI-VFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIE 202

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
            +  ++  F +L + +    L+ +M +      V T+  +I    +      A  F+  +
Sbjct: 203 TFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSM 262

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
           E+ G  P++V +N +I      G  + A  V D +    + PDSYT+ SL+S +C  G+ 
Sbjct: 263 ENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKL 322

Query: 377 S-------------LLP------KLVCGLEVEADLV-------------------VYNAL 398
                         LLP       L+ G   + DLV                    YN L
Sbjct: 323 EEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLL 382

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           +      G  ++A  +   M D G  PD+ ++  L+ G C      +A N++  ++    
Sbjct: 383 IHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGI 442

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
                 +T+++  L +  R   A  LF + I E    D++ +   I G    G  + A+ 
Sbjct: 443 QPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFA 502

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
           L  +M    + P+  TY  ++   C+E  ++  + LL+++    I  D+ +   L     
Sbjct: 503 LLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYS 562

Query: 579 KFHSSSSAVNQLVEMCNLGLIP 600
           K    + A     EM ++G  P
Sbjct: 563 KRGDINDAFTIRDEMLSIGFNP 584



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 116/255 (45%), Gaps = 4/255 (1%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           L G+ +   G++ ++   G V  + T+ + +  Y R           DEM   G  P   
Sbjct: 388 LEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLV 447

Query: 156 ARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
               ++ VL K  R+    DL  K+++E   P+ + FN  +   C   ++     ++  M
Sbjct: 448 TYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEM 507

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
            ++   P+   +  L+   C+ G++ EA +LL  M   G      ++  LI G+ +   +
Sbjct: 508 DKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDI 567

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           + A  + ++M+  G +P ++TY +LI+G  + +   +A   L  + S+G  PD   +  L
Sbjct: 568 NDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSL 627

Query: 332 IDCLSKMGSYDDALD 346
           I+ + K+    +A D
Sbjct: 628 IEGIGKVDDSSEASD 642


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 111/451 (24%), Positives = 202/451 (44%), Gaps = 16/451 (3%)

Query: 119  AQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV-- 176
            A T    ++  W        ++ FDEM + G   +     I+++ L K  +  L IK+  
Sbjct: 1016 AVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHE 1075

Query: 177  -LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGR 235
             +K     +  ++ + +  LCK    +   D+   M+  G  P+V ++  L++  C+ GR
Sbjct: 1076 KMKGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGR 1135

Query: 236  IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
            + EA +    M   G S  V  +  LI G  R        +    MV  G SP+  T+T 
Sbjct: 1136 LKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTI 1195

Query: 296  LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
            LI G  +      A   L+++  +G  PD++ +N L++ L  +G  +DA  +++ L +  
Sbjct: 1196 LIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRG 1255

Query: 356  LVPDSYTFCSLLSTVCLSGRF--------SLLPKLVCGLEVEADLVVYNALLSYFCKAGF 407
            +  + +++  L++  C   +          + PK   GL  +   V YN L+   C++G 
Sbjct: 1256 IKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPK---GL--KPSTVTYNTLIGALCQSGR 1310

Query: 408  PNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTA 467
               A KL+  M   G      ++  LL GLC    ++EA++++Q I       N  V + 
Sbjct: 1311 VRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSI 1370

Query: 468  IVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIA 527
            ++D +  AG+  +A + F          D ++Y + I GL   G   EA  L  QM+   
Sbjct: 1371 LLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKG 1430

Query: 528  VPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
              P++ T+ V++ +  KE  I    +LL+++
Sbjct: 1431 CLPDSITFNVIIQNLLKENEIHEAIQLLEEM 1461



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/409 (22%), Positives = 187/409 (45%), Gaps = 8/409 (1%)

Query: 153  NTFARNIVMDVLFKIGRVDLGIKVLKET----QLPNFLSFNIALCNLCKLNDVSNVKDVI 208
            + F R +     F I +++  IK+   +     +P   +FN  L ++ KL   S V  + 
Sbjct: 910  SPFERYVRDQCRFGIIKLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMY 969

Query: 209  GMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRL 268
              +   G  P++    IL++C C +  +   + + G  +  G        T L+ G    
Sbjct: 970  RKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWME 1029

Query: 269  RRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH 328
              +  A  L+++M + G   +  TY  LI G  +A+   +A    + ++      D+  +
Sbjct: 1030 NGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKG-DVFTY 1088

Query: 329  NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE- 387
             ++ID L K G   +ALD++  ++   ++PD   + SL+  +C  GR     +    +E 
Sbjct: 1089 GMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEG 1148

Query: 388  --VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
              + AD+  YN+L+    +AG   +     N M+D+GF+PD ++F  L+ GLC   K+ E
Sbjct: 1149 RGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGE 1208

Query: 446  AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
            A  + + +       +   +  +++ L   G+   A +LF         L+V SY + I 
Sbjct: 1209 AQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILIN 1268

Query: 506  GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
            G  +  + +EA+  + +M+   + P+  TY  ++ + C+   ++  ++L
Sbjct: 1269 GYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKL 1317



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 110/470 (23%), Positives = 193/470 (41%), Gaps = 44/470 (9%)

Query: 171  DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCF 230
            D+GI+       P+  + NI +   C L  V     V G  +++GF P+      L+   
Sbjct: 974  DVGIQ-------PDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGV 1026

Query: 231  CKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN------ 284
                 I +A QL   M   G       + +LI+G  + R+  +A  L EKM  N      
Sbjct: 1027 WMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVF 1086

Query: 285  ----------------------------GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
                                        G  P+VV Y+SL+ G         A  F   +
Sbjct: 1087 TYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEM 1146

Query: 317  ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
            E  G + D+  +N LI  LS+ G + +     + +++    PD++TF  L+  +C  G+ 
Sbjct: 1147 EGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKV 1206

Query: 377  SLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
                +++  +     E D++ YN L++  C  G    A KL+ ++ D+G   + +S+  L
Sbjct: 1207 GEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNIL 1266

Query: 434  LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
            + G C  +KIDEA   ++ +       +   +  ++  L ++GR   A +LF        
Sbjct: 1267 INGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQ 1326

Query: 494  PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
             L + +Y V + GL + G  EEA  L+  +K     PN   + ++L   C+   ++   +
Sbjct: 1327 FLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWK 1386

Query: 554  LLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
               ++    +E D      L   +      S AV  L +M   G +PD +
Sbjct: 1387 QFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSI 1436



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 71/327 (21%), Positives = 142/327 (43%), Gaps = 4/327 (1%)

Query: 277  LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
            ++ K+   G  P++ T   LI      +     F         G  PD V    L+  + 
Sbjct: 968  MYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVW 1027

Query: 337  KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE--VEADLVV 394
                  DA+ ++D + +  L+ D+ T+  L++ +C + +  L  KL   ++   + D+  
Sbjct: 1028 MENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFT 1087

Query: 395  YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
            Y  ++   CK G   +A+ +++ M+  G  PD   +  L+ GLC   ++ EA+  ++ + 
Sbjct: 1088 YGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEME 1147

Query: 455  MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK-YPLDVVSYTVAIRGLLEGGRT 513
                + + + + +++  L  AG   K +  F   +V++ +  D  ++T+ I GL + G+ 
Sbjct: 1148 GRGISADVYTYNSLIHGLSRAG-LWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKV 1206

Query: 514  EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
             EA  +   M+H    P+  TY  ++   C    ++   +L + + D  I+L+  +   L
Sbjct: 1207 GEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNIL 1266

Query: 574  TKFIFKFHSSSSAVNQLVEMCNLGLIP 600
                 K      A     EM   GL P
Sbjct: 1267 INGYCKDQKIDEAFRFFEEMRPKGLKP 1293



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 110/245 (44%), Gaps = 5/245 (2%)

Query: 96   LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
            L G+ E    +   LA  G  +   ++ + +  Y + +        F+EM   G  P+T 
Sbjct: 1237 LVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTV 1296

Query: 156  ARNIVMDVLFKIGRVDLGIKVLKETQL-PNFL---SFNIALCNLCKLNDVSNVKDVIGMM 211
              N ++  L + GRV    K+  E Q    FL   ++ + L  LCK   +    D+   +
Sbjct: 1297 TYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSI 1356

Query: 212  VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
             +    PN+ +F ILL+  C+ G++ EA++    +   G      A+ +LI+G      L
Sbjct: 1357 KKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGML 1416

Query: 272  DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
              A  L  +M + GC P+ +T+  +I+  ++      A   L+ + +   +PD    ++L
Sbjct: 1417 SEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSML 1476

Query: 332  IDCLS 336
            + CL+
Sbjct: 1477 L-CLA 1480



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 124/282 (43%), Gaps = 20/282 (7%)

Query: 106  IVGELARVGCVIKAQTFLLFLR--------IYWRGEMYGMVL--------EAFDEMGRFG 149
            ++  L + G V +AQ  L  +R        + +   M G+ L        + F+ +   G
Sbjct: 1196 LIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRG 1255

Query: 150  FTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVK 205
               N F+ NI+++   K  ++D   +  +E +     P+ +++N  +  LC+   V   +
Sbjct: 1256 IKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQ 1315

Query: 206  DVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF 265
             +   M   G +  +  + +LL+  CK G + EA  L   +       ++  +++L+DG 
Sbjct: 1316 KLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGM 1375

Query: 266  RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL 325
             R  +L+ A   ++++ +NG  P+ + Y  LI G     M S A   L  +E +G  PD 
Sbjct: 1376 CRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDS 1435

Query: 326  VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            +  NV+I  L K     +A+ + + +      PD      LL
Sbjct: 1436 ITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 120/278 (43%), Gaps = 8/278 (2%)

Query: 329  NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC-----LSGRFSLLPKLV 383
            N L+  ++K+G Y     +Y  + ++ + PD YT   L+   C       G       L 
Sbjct: 950  NHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLK 1009

Query: 384  CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
             G E +A + V   +   + + G P+ AV+L++ M  KG   D  ++  L+ GLC ARK 
Sbjct: 1010 RGFEPDA-VTVTTLVKGVWMENGIPD-AVQLFDEMTKKGLLGDAKTYGILINGLCKARKT 1067

Query: 444  DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
              AI +++ +  N    +   +  I+D L + G   +A+ +F   I      DVV Y+  
Sbjct: 1068 GLAIKLHEKMKGNCKG-DVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSL 1126

Query: 504  IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
            + GL   GR +EA   + +M+   +  + YTY  ++    +    K V   L  ++D   
Sbjct: 1127 MDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGF 1186

Query: 564  ELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
              D  T   L   + K      A   L  M + G  PD
Sbjct: 1187 SPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPD 1224


>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 111/458 (24%), Positives = 197/458 (43%), Gaps = 35/458 (7%)

Query: 147 RFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ---LPNFLSFNIALCNLCKLNDVSN 203
           R G  P+  + N ++  L + G+VD  +K  +E +   +PN  ++NI +  LCK   +  
Sbjct: 368 RKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLET 427

Query: 204 VKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLID 263
              V   M   G +PNV    I+++  CK  R+ +A  +   +           +  LI+
Sbjct: 428 ALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIE 487

Query: 264 GFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP 323
           G  R  R+D A  L+E+M+     PN V YTSLI+ F +           + +   G +P
Sbjct: 488 GLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSP 547

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV 383
           DL+  N  +DC+ K G  +    ++  +  L  +PD+ +                     
Sbjct: 548 DLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARS--------------------- 586

Query: 384 CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
                      Y  L+    KAGF ++A +L+ TM ++G   D  ++  ++ G C + K+
Sbjct: 587 -----------YTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKV 635

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           ++A  + + +           + +++D L +  R  +A  LF  A  +   L+VV Y+  
Sbjct: 636 NKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSL 695

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           I G  + GR +EAY++  ++    + PN YT+  +L +  K   I       Q + D + 
Sbjct: 696 IDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKC 755

Query: 564 ELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
             +Y T   L   + K    + A     EM   G  P+
Sbjct: 756 TPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPN 793



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 130/551 (23%), Positives = 232/551 (42%), Gaps = 21/551 (3%)

Query: 70  FIWCAKQRDYFHDVQS-----FDHMISVVTRLTGRFETVRG------IVGELARVGCVIK 118
           FI   K R+ F  +Q+     F    S  T L G   T R       +  ++  +G  + 
Sbjct: 175 FIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVN 234

Query: 119 AQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK 178
              F   +R++ R       L   DEM      P+    N+ +D   K G+VD+  K   
Sbjct: 235 VHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFH 294

Query: 179 ETQLPNF----LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
           E +        +++   +  LCK + ++   ++   M +    P    +  ++  +   G
Sbjct: 295 EMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAG 354

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
           +  +AY LL      G   SV ++  ++    R  ++D A   +E+M ++   PN+ TY 
Sbjct: 355 KFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYN 413

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
            +I    +A     A    D ++  G  P+++  N+++D L K    DDA  +++GL   
Sbjct: 414 IMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHK 473

Query: 355 KLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQ 410
              PD+ T+CSL+  +   GR    + L  +++   ++  + VVY +L+  F K G    
Sbjct: 474 TCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQI-PNAVVYTSLIRNFFKCGRKED 532

Query: 411 AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
             K+YN ML  G +PD       +  +  A +I++   ++Q I       +A  +T ++ 
Sbjct: 533 GHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIH 592

Query: 471 RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
            L++AG  H+A +LF     +   LD  +Y   I G  + G+  +AY L  +MK     P
Sbjct: 593 GLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEP 652

Query: 531 NAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQL 590
              TY  ++    K   +     L ++     IEL+      L     K      A   +
Sbjct: 653 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIM 712

Query: 591 VEMCNLGLIPD 601
            E+   GL P+
Sbjct: 713 EELMQKGLTPN 723



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 122/473 (25%), Positives = 212/473 (44%), Gaps = 22/473 (4%)

Query: 77  RDYFHDVQSFDHMISV---VTRL--TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWR 131
           RD   D   F ++I+V   V RL    R +    I   L    C   A T+   +    R
Sbjct: 432 RDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGR 491

Query: 132 GEMYGMVLEAF---DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PN 184
              +G V EA+   ++M      PN      ++   FK GR + G K+  E       P+
Sbjct: 492 ---HGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPD 548

Query: 185 FLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLG 244
            L  N  +  + K  ++   + +   +   GF P+ R + IL++   K G   EAY+L  
Sbjct: 549 LLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFY 608

Query: 245 LMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
            M   G  L   A+  +IDGF +  +++ A  L E+M   G  P VVTY S+I G  +  
Sbjct: 609 TMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKID 668

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
               A+   +  +S+G   ++V ++ LID   K+G  D+A  + + L++  L P+ YT+ 
Sbjct: 669 RLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWN 728

Query: 365 SLLSTVCLSGRFSLLPKLVC-----GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
            LL  +  +   S    LVC      L+   + + Y+ L+   CK    N+A   +  M 
Sbjct: 729 CLLDALVKAEEIS--EALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQ 786

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
            +GF P+ +++  ++ GL  A  I EA  +++         ++ ++ AI++ L  A R  
Sbjct: 787 KQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRAS 846

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
            A +LF  A ++   +   +  V +  L +    E+A I+ + ++  A   +A
Sbjct: 847 DAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLRETAKAQHA 899



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 109/505 (21%), Positives = 219/505 (43%), Gaps = 43/505 (8%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           + G+FE    ++    R GC+    ++   L    R       L+ F+EM +    PN  
Sbjct: 352 MAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLS 410

Query: 156 ARNIVMDVLFKIGRVDLGIKV---LKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
             NI++D+L K G+++  + V   +K+  L PN ++ NI +  LCK   + +   +   +
Sbjct: 411 TYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGL 470

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
             K   P+   +  L+    + GR+ EAY+L   M+      +   +T LI  F +  R 
Sbjct: 471 DHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRK 530

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           +    ++ +M++ GCSP+++   + +    +A       +    +++ G  PD   + +L
Sbjct: 531 EDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTIL 590

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKL----- 382
           I  L K G   +A +++  + E   V D+  + +++   C SG+    + LL ++     
Sbjct: 591 IHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGH 650

Query: 383 ----------VCGLE-------------------VEADLVVYNALLSYFCKAGFPNQAVK 413
                     + GL                    +E ++V+Y++L+  F K G  ++A  
Sbjct: 651 EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYL 710

Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
           +   ++ KG TP+ Y++  LL  L  A +I EA+  +Q +       N   ++ ++  L 
Sbjct: 711 IMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLC 770

Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
           +  + +KA   ++    + +  +V +YT  I GL + G   EA  L+ + K      ++ 
Sbjct: 771 KIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSA 830

Query: 534 TYRVMLLSFCKERNIKMVKRLLQDV 558
            Y  ++             RL ++ 
Sbjct: 831 IYNAIIEGLSNANRASDAYRLFEEA 855



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 99/445 (22%), Positives = 197/445 (44%), Gaps = 6/445 (1%)

Query: 120 QTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTP-NTFARNIVMDVL--FKIGRVDLGIKV 176
           + +   L +  R   +  + +  +EM   GF P N     IV+  +   K+      I+ 
Sbjct: 131 EAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQT 190

Query: 177 LKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGR 235
           +++ +  P F ++   +  L    D   +  +   M   G+  NV +F  L+  F + GR
Sbjct: 191 MRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGR 250

Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
           +  A  LL  M +      V  + V ID F +  ++DMA   + +M  NG   + VTYTS
Sbjct: 251 VDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTS 310

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           +I    +A   + A    + ++     P    +N +I      G ++DA  + +      
Sbjct: 311 MIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKG 370

Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA--DLVVYNALLSYFCKAGFPNQAVK 413
            +P   ++  +LS +   G+     K    ++ +A  +L  YN ++   CKAG    A+ 
Sbjct: 371 CIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLETALV 430

Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
           + + M D G  P+  +   ++  LC A+++D+A ++++G+       +A  + ++++ L 
Sbjct: 431 VRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLG 490

Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
             GR  +A +L+ + +      + V YT  IR   + GR E+ + +Y++M  +   P+  
Sbjct: 491 RHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLL 550

Query: 534 TYRVMLLSFCKERNIKMVKRLLQDV 558
                +    K   I+  + L Q++
Sbjct: 551 LLNTYMDCVFKAGEIEKGRALFQEI 575



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 116/454 (25%), Positives = 189/454 (41%), Gaps = 41/454 (9%)

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYP-NVRMFEILLNCFCKMGRIAEAYQLLGL 245
           ++N  L  + +    + ++ ++  M   GF P N    EI+L+ F K  ++ EA+  +  
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLS-FIKSRKLREAFTFIQT 190

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           M  L    + +A+T LI      R  D    L+++M + G + NV  +T+LI+ F     
Sbjct: 191 MRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGR 250

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
              A S LD ++S    PD+V +NV IDC  K G  D A   +  +    LV D  T+ S
Sbjct: 251 VDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTS 310

Query: 366 LLSTVCLSGRFSLLPKLV----------CG----------------------LEVE---- 389
           ++  +C + R +   +L           C                       LE +    
Sbjct: 311 MIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKG 370

Query: 390 --ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
               +V YN +LS   + G  ++A+K +  M  K   P+  ++  ++  LC A K++ A+
Sbjct: 371 CIPSVVSYNCILSCLGRKGQVDEALKKFEEM-KKDAIPNLSTYNIMIDMLCKAGKLETAL 429

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            V   +       N      +VDRL +A R   A  +F     +    D V+Y   I GL
Sbjct: 430 VVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGL 489

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
              GR +EAY LY QM      PNA  Y  ++ +F K    +   ++  +++      D 
Sbjct: 490 GRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDL 549

Query: 568 HTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
                    +FK            E+ NLG IPD
Sbjct: 550 LLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPD 583


>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 111/458 (24%), Positives = 197/458 (43%), Gaps = 35/458 (7%)

Query: 147 RFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ---LPNFLSFNIALCNLCKLNDVSN 203
           R G  P+  + N ++  L + G+VD  +K  +E +   +PN  ++NI +  LCK   +  
Sbjct: 368 RKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLET 427

Query: 204 VKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLID 263
              V   M   G +PNV    I+++  CK  R+ +A  +   +           +  LI+
Sbjct: 428 ALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIE 487

Query: 264 GFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP 323
           G  R  R+D A  L+E+M+     PN V YTSLI+ F +           + +   G +P
Sbjct: 488 GLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSP 547

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV 383
           DL+  N  +DC+ K G  +    ++  +  L  +PD+ +                     
Sbjct: 548 DLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARS--------------------- 586

Query: 384 CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
                      Y  L+    KAGF ++A +L+ TM ++G   D  ++  ++ G C + K+
Sbjct: 587 -----------YTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKV 635

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           ++A  + + +           + +++D L +  R  +A  LF  A  +   L+VV Y+  
Sbjct: 636 NKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSL 695

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           I G  + GR +EAY++  ++    + PN YT+  +L +  K   I       Q + D + 
Sbjct: 696 IDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKC 755

Query: 564 ELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
             +Y T   L   + K    + A     EM   G  P+
Sbjct: 756 TPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPN 793



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 130/551 (23%), Positives = 232/551 (42%), Gaps = 21/551 (3%)

Query: 70  FIWCAKQRDYFHDVQS-----FDHMISVVTRLTGRFETVRG------IVGELARVGCVIK 118
           FI   K R+ F  +Q+     F    S  T L G   T R       +  ++  +G  + 
Sbjct: 175 FIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVN 234

Query: 119 AQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK 178
              F   +R++ R       L   DEM      P+    N+ +D   K G+VD+  K   
Sbjct: 235 VHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFH 294

Query: 179 ETQLPNFLSFNIALCN----LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
           E +    +  ++   +    LCK + ++   ++   M +    P    +  ++  +   G
Sbjct: 295 EMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAG 354

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
           +  +AY LL      G   SV ++  ++    R  ++D A   +E+M ++   PN+ TY 
Sbjct: 355 KFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYN 413

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
            +I    +A     A    D ++  G  P+++  N+++D L K    DDA  +++GL   
Sbjct: 414 IMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHK 473

Query: 355 KLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQ 410
              PD+ T+CSL+  +   GR    + L  +++   ++  + VVY +L+  F K G    
Sbjct: 474 TCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQI-PNAVVYTSLIRNFFKCGRKED 532

Query: 411 AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
             K+YN ML  G +PD       +  +  A +I++   ++Q I       +A  +T ++ 
Sbjct: 533 GHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIH 592

Query: 471 RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
            L++AG  H+A +LF     +   LD  +Y   I G  + G+  +AY L  +MK     P
Sbjct: 593 GLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEP 652

Query: 531 NAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQL 590
              TY  ++    K   +     L ++     IEL+      L     K      A   +
Sbjct: 653 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIM 712

Query: 591 VEMCNLGLIPD 601
            E+   GL P+
Sbjct: 713 EELMQKGLTPN 723



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 122/473 (25%), Positives = 212/473 (44%), Gaps = 22/473 (4%)

Query: 77  RDYFHDVQSFDHMISV---VTRL--TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWR 131
           RD   D   F ++I+V   V RL    R +    I   L    C   A T+   +    R
Sbjct: 432 RDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGR 491

Query: 132 GEMYGMVLEAF---DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PN 184
              +G V EA+   ++M      PN      ++   FK GR + G K+  E       P+
Sbjct: 492 ---HGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPD 548

Query: 185 FLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLG 244
            L  N  +  + K  ++   + +   +   GF P+ R + IL++   K G   EAY+L  
Sbjct: 549 LLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFY 608

Query: 245 LMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
            M   G  L   A+  +IDGF +  +++ A  L E+M   G  P VVTY S+I G  +  
Sbjct: 609 TMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKID 668

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
               A+   +  +S+G   ++V ++ LID   K+G  D+A  + + L++  L P+ YT+ 
Sbjct: 669 RLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWN 728

Query: 365 SLLSTVCLSGRFSLLPKLVC-----GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
            LL  +  +   S    LVC      L+   + + Y+ L+   CK    N+A   +  M 
Sbjct: 729 CLLDALVKAEEIS--EALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQ 786

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
            +GF P+ +++  ++ GL  A  I EA  +++         ++ ++ AI++ L  A R  
Sbjct: 787 KQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRAS 846

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
            A +LF  A ++   +   +  V +  L +    E+A I+ + ++  A   +A
Sbjct: 847 DAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLRETAKAQHA 899



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 109/505 (21%), Positives = 219/505 (43%), Gaps = 43/505 (8%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           + G+FE    ++    R GC+    ++   L    R       L+ F+EM +    PN  
Sbjct: 352 MAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLS 410

Query: 156 ARNIVMDVLFKIGRVDLGIKV---LKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
             NI++D+L K G+++  + V   +K+  L PN ++ NI +  LCK   + +   +   +
Sbjct: 411 TYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGL 470

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
             K   P+   +  L+    + GR+ EAY+L   M+      +   +T LI  F +  R 
Sbjct: 471 DHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRK 530

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           +    ++ +M++ GCSP+++   + +    +A       +    +++ G  PD   + +L
Sbjct: 531 EDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTIL 590

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKL----- 382
           I  L K G   +A +++  + E   V D+  + +++   C SG+    + LL ++     
Sbjct: 591 IHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGH 650

Query: 383 ----------VCGLE-------------------VEADLVVYNALLSYFCKAGFPNQAVK 413
                     + GL                    +E ++V+Y++L+  F K G  ++A  
Sbjct: 651 EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYL 710

Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
           +   ++ KG TP+ Y++  LL  L  A +I EA+  +Q +       N   ++ ++  L 
Sbjct: 711 IMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLC 770

Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
           +  + +KA   ++    + +  +V +YT  I GL + G   EA  L+ + K      ++ 
Sbjct: 771 KIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSA 830

Query: 534 TYRVMLLSFCKERNIKMVKRLLQDV 558
            Y  ++             RL ++ 
Sbjct: 831 IYNAIIEGLSNANRASDAYRLFEEA 855



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 99/445 (22%), Positives = 197/445 (44%), Gaps = 6/445 (1%)

Query: 120 QTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTP-NTFARNIVMDVL--FKIGRVDLGIKV 176
           + +   L +  R   +  + +  +EM   GF P N     IV+  +   K+      I+ 
Sbjct: 131 EAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQT 190

Query: 177 LKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGR 235
           +++ +  P F ++   +  L    D   +  +   M   G+  NV +F  L+  F + GR
Sbjct: 191 MRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGR 250

Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
           +  A  LL  M +      V  + V ID F +  ++DMA   + +M  NG   + VTYTS
Sbjct: 251 VDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTS 310

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           +I    +A   + A    + ++     P    +N +I      G ++DA  + +      
Sbjct: 311 MIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKG 370

Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA--DLVVYNALLSYFCKAGFPNQAVK 413
            +P   ++  +LS +   G+     K    ++ +A  +L  YN ++   CKAG    A+ 
Sbjct: 371 CIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLETALV 430

Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
           + + M D G  P+  +   ++  LC A+++D+A ++++G+       +A  + ++++ L 
Sbjct: 431 VRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLG 490

Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
             GR  +A +L+ + +      + V YT  IR   + GR E+ + +Y++M  +   P+  
Sbjct: 491 RHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLL 550

Query: 534 TYRVMLLSFCKERNIKMVKRLLQDV 558
                +    K   I+  + L Q++
Sbjct: 551 LLNTYMDCVFKAGEIEKGRALFQEI 575



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 116/454 (25%), Positives = 189/454 (41%), Gaps = 41/454 (9%)

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYP-NVRMFEILLNCFCKMGRIAEAYQLLGL 245
           ++N  L  + +    + ++ ++  M   GF P N    EI+L+ F K  ++ EA+  +  
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLS-FIKSRKLREAFTFIQT 190

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           M  L    + +A+T LI      R  D    L+++M + G + NV  +T+LI+ F     
Sbjct: 191 MRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGR 250

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
              A S LD ++S    PD+V +NV IDC  K G  D A   +  +    LV D  T+ S
Sbjct: 251 VDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTS 310

Query: 366 LLSTVCLSGRFSLLPKLV----------CG----------------------LEVE---- 389
           ++  +C + R +   +L           C                       LE +    
Sbjct: 311 MIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKG 370

Query: 390 --ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
               +V YN +LS   + G  ++A+K +  M  K   P+  ++  ++  LC A K++ A+
Sbjct: 371 CIPSVVSYNCILSCLGRKGQVDEALKKFEEM-KKDAIPNLSTYNIMIDMLCKAGKLETAL 429

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            V   +       N      +VDRL +A R   A  +F     +    D V+Y   I GL
Sbjct: 430 VVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGL 489

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
              GR +EAY LY QM      PNA  Y  ++ +F K    +   ++  +++      D 
Sbjct: 490 GRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDL 549

Query: 568 HTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
                    +FK            E+ NLG IPD
Sbjct: 550 LLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPD 583


>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 498

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 118/438 (26%), Positives = 205/438 (46%), Gaps = 30/438 (6%)

Query: 151 TPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKD 206
           TP  F    ++  L KI      I + ++ +L     N ++ NI +    +L        
Sbjct: 57  TPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFS 116

Query: 207 VIGMMVRKGFYPNVRM-------------FEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
           V   +++KG+ PNV               +  L+N  CK+G+   A QLL  +       
Sbjct: 117 VFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQP 176

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
           +V  +  +ID   +++ ++ A  L+ +MV  G SP+VVTY++LI GF        A    
Sbjct: 177 NVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLF 236

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           + +  E   PD+   N+L+D   K G   +   V+  +++  + P+  T+CSL+   CL 
Sbjct: 237 NKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLV 296

Query: 374 GRF----SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
            +     S+   +  G  V  D   YN +++ FCK    ++A+ L+  M  K   P+  +
Sbjct: 297 KQVNKANSIFNTMAQG-GVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVT 355

Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI------- 482
           +  L+ GLC + KI  A+ +   +       +   +++I+D L +  +  KAI       
Sbjct: 356 YTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLK 415

Query: 483 -QLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
            Q+F    V+ Y LDV +YTV I+G    G   EA  L S+M+     P+A TY +++LS
Sbjct: 416 DQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILS 475

Query: 542 FCKERNIKMVKRLLQDVI 559
             K+    M ++LL+++I
Sbjct: 476 LFKKDENDMAEKLLREMI 493



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 106/466 (22%), Positives = 198/466 (42%), Gaps = 75/466 (16%)

Query: 178 KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIA 237
           ++   P    F   L +L K+N       +   M  KG   N+    IL+NCF ++G+  
Sbjct: 53  QKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNP 112

Query: 238 EAYQLLGLMITLGTSLSVNAWTVLIDGF-----------------------RRLRRLDMA 274
            ++ +   ++  G   +V   T LI G                        + LRR+D  
Sbjct: 113 LSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVD-- 170

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
                K+VQ    PNVV Y ++I    + K+ + AF     + SEG +PD+V ++ LI  
Sbjct: 171 ----GKLVQ----PNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISG 222

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVV 394
              +G   DA+D+++ ++   + PD YTF                               
Sbjct: 223 FFIVGKLKDAIDLFNKMILENIKPDVYTF------------------------------- 251

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
            N L+  FCK G   +   ++  M+ +G  P+  ++  L+ G C  +++++A +++  + 
Sbjct: 252 -NILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMA 310

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
                 +   +  +++   +  +  +A+ LF++   +    +VV+YT  I GL + G+  
Sbjct: 311 QGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKIS 370

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI--------KMVKRLLQDVIDARIELD 566
            A  L  +M    VPP+  TY  +L + CK   +        K+  ++ +D+      LD
Sbjct: 371 YALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLD 430

Query: 567 -YHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLS 611
            Y  ++ +  F  K    + A+  L +M + G IPD    ++ +LS
Sbjct: 431 VYAYTVMIQGFCVK-GLFNEALALLSKMEDNGRIPDAKTYEIIILS 475



 Score = 45.8 bits (107), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 43/202 (21%), Positives = 83/202 (41%), Gaps = 12/202 (5%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           L  +      I   +A+ G     Q++ + +  + + +     +  F +M      PN  
Sbjct: 295 LVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVV 354

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDV-------SNV 204
               ++D L K G++   +K++ E       P+ ++++  L  LCK + V       + +
Sbjct: 355 TYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKL 414

Query: 205 KD-VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLID 263
           KD V   +  KG+  +V  + +++  FC  G   EA  LL  M   G       + ++I 
Sbjct: 415 KDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIIL 474

Query: 264 GFRRLRRLDMAGYLWEKMVQNG 285
              +    DMA  L  +M+  G
Sbjct: 475 SLFKKDENDMAEKLLREMIARG 496


>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
 gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
          Length = 841

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 114/525 (21%), Positives = 231/525 (44%), Gaps = 42/525 (8%)

Query: 86  FDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEM 145
           F  +I V  +     E V+ + GE+   G  +        ++ Y +       LE FD+M
Sbjct: 297 FTRVIGVCMKQGKMLEAVK-VKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKM 355

Query: 146 GRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ------------------------ 181
              G  PN     ++++   K G +D   ++  + +                        
Sbjct: 356 NENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSP 415

Query: 182 --------------LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILL 227
                         + N  ++N  L  LCK   +S    +   MVRKG  P+V  +  ++
Sbjct: 416 EEASKLFDEAVACGIANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMI 475

Query: 228 NCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCS 287
              C+ G +  A  +   M+  G   ++  ++VL+DG+ +    + A  L+++M     +
Sbjct: 476 LGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIA 535

Query: 288 PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
           P+  T   +I G  +A   S +   L  L  EG  P  + +N +ID   K GS + AL V
Sbjct: 536 PSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAV 595

Query: 348 YDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCK 404
           Y  + ++ + P+ +T+ +L++  C S    L  K++  ++   +E D+ VY AL+  FC+
Sbjct: 596 YTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCR 655

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV 464
            G    A +L + + + G +P+   +  ++ G    + ++ A+++++ ++      +  +
Sbjct: 656 KGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQI 715

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
           +T ++  L++ G+   A +L+   + +    D+++Y+V I GL   G+ E A  +   M 
Sbjct: 716 YTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMD 775

Query: 525 HIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
              + P  + Y  ++    KE N++   RL  +++D  +  D  T
Sbjct: 776 RKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTT 820



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 149/683 (21%), Positives = 291/683 (42%), Gaps = 76/683 (11%)

Query: 18  ILKTIISFKSIHQISSPKVCATTHQDFPIILAPHIVHSTLLNCPSD-LIALSFFIWCAKQ 76
           I +T +S       + P   A T QD  +    +I   TLLN  +D   ALS+F W +++
Sbjct: 34  ISETPLSQNPHPNTNFPGKSAPTSQDSFLTQTQYI--DTLLNHQNDPQSALSYFTWASQK 91

Query: 77  RDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELA--------------------RVGCV 116
           R     V +   ++ ++T+ T      R ++   A                    R+   
Sbjct: 92  RGLIKSVDALCVLLHILTKSTETCGKARNLLNRFASDDWGPVPSVVVARLIESSRRLDFE 151

Query: 117 IKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTP-----NTFARNIVMDVLFKIGR-- 169
             ++ F   L  Y + +     ++ F+ +      P     N F   +V + + +  R  
Sbjct: 152 SDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDV 211

Query: 170 ----VDLGIK------------VLKETQLP----------------NFLSFNIALCNLCK 197
                  G+K             ++E +L                 +  +++I +  +CK
Sbjct: 212 YNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCK 271

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
             D      ++  M  KG+ P+  +F  ++    K G++ EA ++ G M++ G  ++V  
Sbjct: 272 KPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVV 331

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
            T L+ G+ +   LD A  L++KM +NG  PN VTY  +I+   +      A+   + ++
Sbjct: 332 ATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMK 391

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
           ++  +P +   N LI    K  S ++A  ++D  +   +  + +T+ SLLS +C  G+ S
Sbjct: 392 NKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIA-NVFTYNSLLSWLCKEGKMS 450

Query: 378 ----LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
               +  K+V    V   +V YN ++   C+ G  + A  ++  ML+KG  P+  ++  L
Sbjct: 451 EACSIWEKMV-RKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVL 509

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           + G       + A  +Y  +   N A +      I++ L +AGR  ++    ++ + E +
Sbjct: 510 MDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGF 569

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
               ++Y   I G ++ G    A  +Y++M  I V PN +TY  ++  FCK  N+ +  +
Sbjct: 570 IPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALK 629

Query: 554 LLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM--------WR 605
           ++ ++ +  IELD      L     +     +A   L E+  +GL P+++        +R
Sbjct: 630 VMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFR 689

Query: 606 KLGLLSDETMTPVSLFDGFVPCE 628
           KL  +         + +  +PC+
Sbjct: 690 KLQNMEAALHLHKRMINEGIPCD 712



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 162/346 (46%), Gaps = 7/346 (2%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G  ++  G+  E+   G      T+ + +  Y++          +D M      P+ F  
Sbjct: 482 GDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTC 541

Query: 158 NIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           NI+++ L K GR     D   K+++E  +P  +++N  +    K   V++   V   M +
Sbjct: 542 NIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCK 601

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G  PNV  +  L+N FCK   +  A +++  M   G  L V  +  LIDGF R   +  
Sbjct: 602 IGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVN 661

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L  ++ + G SPN V Y+S+I GF + +    A      + +EG   DL  +  LI 
Sbjct: 662 ASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLIS 721

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEA 390
            L K G    A ++Y  +L   ++PD  T+  L+  +C  G+     K++  ++   +  
Sbjct: 722 GLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTP 781

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
            + +YN L++   K G   +A +L+N MLDKG  PD+ ++  L+ G
Sbjct: 782 TVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNG 827



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 118/523 (22%), Positives = 216/523 (41%), Gaps = 13/523 (2%)

Query: 90  ISVVTRLT---GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMG 146
           ISV+ R +   G+ E   G   E    G  + A+ + + +    +       L    EM 
Sbjct: 227 ISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMR 286

Query: 147 RFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET----QLPNFLSFNIALCNLCKLNDVS 202
             G+ P+      V+ V  K G++   +KV  E     +  N +     +   CK  D+ 
Sbjct: 287 DKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLD 346

Query: 203 NVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLI 262
           +  ++   M   G  PN   + +++   CK G + +AY++   M     S +V     LI
Sbjct: 347 SALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLI 406

Query: 263 DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
            G+ + R  + A  L+++ V  G + NV TY SL+    +    S A S  + +  +G  
Sbjct: 407 RGYLKARSPEEASKLFDEAVACGIA-NVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVR 465

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSL 378
           P +V +N +I    + G  D A  V+  +LE  L P+  T+  L+      G     F L
Sbjct: 466 PSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGL 525

Query: 379 LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
             ++  G  +       N +++  CKAG  +++      ++ +GF P   ++  ++ G  
Sbjct: 526 YDRMR-GENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFV 584

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
               ++ A+ VY  +     + N   +T +++   ++     A+++      +   LDV 
Sbjct: 585 KEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVT 644

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
            Y   I G    G    A  L S+++ + + PN   Y  M+  F K +N++    L + +
Sbjct: 645 VYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRM 704

Query: 559 IDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           I+  I  D      L   + K      A     EM   G++PD
Sbjct: 705 INEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPD 747



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 97/435 (22%), Positives = 181/435 (41%), Gaps = 55/435 (12%)

Query: 125 FLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKET 180
            +R Y +        + FDE    G   N F  N ++  L K G++        K++++ 
Sbjct: 405 LIRGYLKARSPEEASKLFDEAVACGIA-NVFTYNSLLSWLCKEGKMSEACSIWEKMVRKG 463

Query: 181 QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILL------------- 227
             P+ +S+N  +   C+  D+ +   V   M+ KG  PN+  + +L+             
Sbjct: 464 VRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAF 523

Query: 228 ----------------------NCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF 265
                                 N  CK GR +E+   L  ++  G   +   +  +IDGF
Sbjct: 524 GLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGF 583

Query: 266 RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL 325
            +   ++ A  ++ +M + G SPNV TYT+LI GF ++    +A   +D ++++G   D+
Sbjct: 584 VKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDV 643

Query: 326 VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCG 385
             +  LID   + G   +A  +   L E+ L P+   + S++S       F  L  +   
Sbjct: 644 TVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISG------FRKLQNMEAA 697

Query: 386 LE---------VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
           L          +  DL +Y  L+S   K G    A +LY  ML KG  PD  ++  L+ G
Sbjct: 698 LHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHG 757

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
           LC   +++ A  + + +          ++  ++    + G   +A +L    + +    D
Sbjct: 758 LCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPD 817

Query: 497 VVSYTVAIRGLLEGG 511
             +Y + + G ++ G
Sbjct: 818 DTTYDILVNGKVKDG 832



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 56/283 (19%), Positives = 108/283 (38%), Gaps = 39/283 (13%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
            GR    +  + +L + G +    T+   +  + +       L  + EM + G +PN F 
Sbjct: 551 AGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFT 610

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNL----CKLNDVSNVKDVIGMMV 212
              +++   K   +DL +KV+ E +           C L    C+  D+ N   ++  + 
Sbjct: 611 YTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQ 670

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
             G  PN  ++  +++ F K+  +  A  L   MI  G    +  +T LI G  +  +L 
Sbjct: 671 EVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLL 730

Query: 273 MAGYLWEKMVQNGCSPNVVT-----------------------------------YTSLI 297
            A  L+ +M+  G  P+++T                                   Y +LI
Sbjct: 731 FASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLI 790

Query: 298 KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
            G  +      AF   + +  +G  PD   +++L++   K G+
Sbjct: 791 TGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGN 833


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/468 (23%), Positives = 214/468 (45%), Gaps = 10/468 (2%)

Query: 133 EMYGMVLEAFD---EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE---TQLPNFL 186
           +  GM  +A++   +M   G  P+TF  ++V+  L    R    + + +E   + LP+  
Sbjct: 343 DQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGLPDVF 402

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           ++N  +   C+ + +    ++   M + G  P++  +  LL  +CK G + EA +L   M
Sbjct: 403 TYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEM 462

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
              G   +V  +  L+ G+   +  D A  L ++M QNG S N  TY  LI G       
Sbjct: 463 PMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRV 522

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
                 L    SEG  P ++ +N +I+   K G    A  VY  + E  L P+  T+ S 
Sbjct: 523 CEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSF 582

Query: 367 LSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           +   C +G   +  K++  +    ++ D+V YNAL++ FC+ G  + A++L   +L  G 
Sbjct: 583 IDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGL 642

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
            P+   +  L+ G      + E    Y+ ++      +   +T ++D   + G    A++
Sbjct: 643 APNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALE 702

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           L+   + + Y  D  ++T    GL   G  + A  L  +M+ + V PN + Y +++  + 
Sbjct: 703 LYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYL 762

Query: 544 KERNIKMVKRLLQDVIDARIELDYHT-SIRLTKFIFKFHSSSSAVNQL 590
           ++  ++   RL  ++++  I+ D  T  I ++K   +  + +  +N +
Sbjct: 763 RDCKLQEAFRLHDEMLNMGIQPDDTTYDILVSKKFLEADNCADVLNPI 810



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 116/506 (22%), Positives = 226/506 (44%), Gaps = 17/506 (3%)

Query: 103 VRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMD 162
            RG+V +       IK++T LL      RG      L  F EM   G+  + +  + +M 
Sbjct: 150 ARGVVPD-------IKSRTDLLIRTA--RGSSAKDALALFMEMRGRGYRVDAWMFDALMS 200

Query: 163 VLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYP 218
              K G  +  +++  E       P+   + +A+  LCKL D      ++  M   GF  
Sbjct: 201 ACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDT 260

Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
               +  +++   K GR+ EA ++   M   G  + V   T L+ G+   + +  A  L+
Sbjct: 261 CDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLF 320

Query: 279 EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
           ++ +++G  P  V Y  LI+G  +  M   A+     +  +G  P     ++++  L   
Sbjct: 321 KETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLND 380

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVY 395
             + DA+ +++ + +  L PD +T+ +L+   C + +      L   ++   V+  +  Y
Sbjct: 381 RRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTY 439

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
           N+LL  +CK G  ++AVKLY+ M  +GF P+  +++ L+RG    +  D A  +   +  
Sbjct: 440 NSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQ 499

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
           N  + N + +  +++ +    R  +   + +  + E +   +++Y   I G ++ G    
Sbjct: 500 NGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGS 559

Query: 516 AYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTK 575
           A+ +Y QM+   +PPN  TY   +  +C+     M  ++L DV    ++ D      L  
Sbjct: 560 AFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALIN 619

Query: 576 FIFKFHSSSSAVNQLVEMCNLGLIPD 601
              +  + S A+  LV +   GL P+
Sbjct: 620 GFCQEGNMSHALQLLVILLKDGLAPN 645



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 124/570 (21%), Positives = 230/570 (40%), Gaps = 99/570 (17%)

Query: 85  SFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDE 144
           ++  M+ V+ + TGR E    +  E+   G  +        +R Y   +  G  L  F E
Sbjct: 264 TYRTMVDVLVK-TGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKE 322

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLND 200
             + G  P      +++    ++G      ++ ++      LP+    ++ L  L  LND
Sbjct: 323 TLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGL--LND 380

Query: 201 VSNVKDVIGM---MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
               KD + +   M   G  P+V  +  L++  C+  ++ EA  L   M   G   S+N 
Sbjct: 381 -RRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINT 438

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  L+ G+ +   +D A  L+ +M   G  PNVVTY +L++G++  K F  A++ LD ++
Sbjct: 439 YNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMK 498

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G + +   +NVLI+ +  +    D +   DG+L+           S +S         
Sbjct: 499 QNGVSCNDYTYNVLINGICMV----DRVCEVDGMLK-----------SFMSE-------G 536

Query: 378 LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
            +P ++           YN++++ F KAG    A  +Y  M +KG  P+  ++   + G 
Sbjct: 537 FIPTMM----------TYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGY 586

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF------------ 485
           C     D A+ +   +       +   + A+++   + G    A+QL             
Sbjct: 587 CRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNT 646

Query: 486 --RRAIVEKYP---------------------LDVVSYTVAIRGLLEGGRTEEAYILYSQ 522
               +++  Y                       D  +YT  I G  + G    A  LYS+
Sbjct: 647 VVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSE 706

Query: 523 MKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV--IDARIEL--------DYHTSIR 572
           M      P+A+T+  +    C+  +I   K+LL+++  +D R  +         Y    +
Sbjct: 707 MMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCK 766

Query: 573 LTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
           L +  F+ H          EM N+G+ PD+
Sbjct: 767 LQE-AFRLHD---------EMLNMGIQPDD 786



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/317 (24%), Positives = 152/317 (47%), Gaps = 7/317 (2%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV---DLGIK-V 176
           T++  +R Y   + +       DEM + G + N +  N++++ +  + RV   D  +K  
Sbjct: 473 TYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSF 532

Query: 177 LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
           + E  +P  +++N  +    K   + +   V   M  KG  PN+  +   ++ +C+ G  
Sbjct: 533 MSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCS 592

Query: 237 AEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSL 296
             A ++L  +   G    + A+  LI+GF +   +  A  L   ++++G +PN V Y SL
Sbjct: 593 DMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSL 652

Query: 297 IKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
           I G+    M      F + +   G   D   +  LID  SK G+   AL++Y  ++    
Sbjct: 653 ITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGY 712

Query: 357 VPDSYTFCSLLSTVCLSGRFSLLPKLVCG---LEVEADLVVYNALLSYFCKAGFPNQAVK 413
           +PD++TF +L   +C SG      KL+     L+V  ++ +YN L++ + +     +A +
Sbjct: 713 IPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFR 772

Query: 414 LYNTMLDKGFTPDNYSF 430
           L++ ML+ G  PD+ ++
Sbjct: 773 LHDEMLNMGIQPDDTTY 789



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/327 (19%), Positives = 135/327 (41%), Gaps = 4/327 (1%)

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
           +  MV  G  P++ + T L+           A +    +   G+  D    + L+    K
Sbjct: 145 YAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLK 204

Query: 338 MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL-EVEADLV--V 394
            G ++DA+ ++D +   ++ PD   +   ++ +C  G      +++  + EV  D     
Sbjct: 205 EGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFT 264

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           Y  ++    K G   +A+++ + M D G   D      L+RG C  +++  A+N+++  +
Sbjct: 265 YRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETL 324

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
            +       ++  ++    + G   KA +L R+   +         ++ ++GLL   R +
Sbjct: 325 KDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWK 384

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLT 574
           +A  L+ +M    + P+ +TY  ++   C+   ++    L   +  A ++   +T   L 
Sbjct: 385 DAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLL 443

Query: 575 KFIFKFHSSSSAVNQLVEMCNLGLIPD 601
               K      AV    EM   G  P+
Sbjct: 444 MGYCKKGCMDEAVKLYSEMPMEGFKPN 470



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 42/194 (21%), Positives = 79/194 (40%)

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
            P+ A   Y  M+ +G  PD  S   LL          +A+ ++  +      V+A +  
Sbjct: 137 LPSAATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFD 196

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
           A++   ++ G    A++LF      +   D   Y +AI  L + G    A  +  +MK +
Sbjct: 197 ALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEV 256

Query: 527 AVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSA 586
                 +TYR M+    K   ++   R+  ++ DA  ++D   +  L +         +A
Sbjct: 257 GFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNA 316

Query: 587 VNQLVEMCNLGLIP 600
           +N   E    G++P
Sbjct: 317 LNLFKETLKDGIVP 330


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/428 (24%), Positives = 200/428 (46%), Gaps = 42/428 (9%)

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCN 194
           L   D++   GF  N  +   +++ + KIG     IK L++       P+ + +N  +  
Sbjct: 149 LHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDA 208

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           +CK   VS    +   M  KG   +V  +  L+  FC +G++ EA  LL  M+    + +
Sbjct: 209 MCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPN 268

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           V  + +L+D   +  ++  A  +   M++    P+V+TY++L+ G+        A    +
Sbjct: 269 VYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFN 328

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            +   G  PD+  + +LI+   K    D+AL+++  + +  +VP   T+ SL+  +C SG
Sbjct: 329 AMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSG 388

Query: 375 RFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
           R S +  L+  +      AD++ Y++L+   CK G  ++A+ L+N M D+   P+ ++F 
Sbjct: 389 RISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFT 448

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            LL GLC                                   + GR   A ++F+  + +
Sbjct: 449 ILLDGLC-----------------------------------KGGRLKDAQEVFQDLLTK 473

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
            Y L+V +Y V I G  + G  EEA  + S+M+     PNA+T+  ++++  K+      
Sbjct: 474 GYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKA 533

Query: 552 KRLLQDVI 559
           ++LL+ +I
Sbjct: 534 EKLLRQMI 541



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/458 (23%), Positives = 200/458 (43%), Gaps = 40/458 (8%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P  + FN  L +  K+   S    +   +  KG  P++    IL+NCFC MG+I   + +
Sbjct: 57  PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           L  ++  G          LI G     ++  A +  +K++  G   N V+Y +LI G  +
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
                 A  FL  ++     PD+V +N +ID + K     +A  ++  +    +  D  T
Sbjct: 177 IGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVT 236

Query: 363 FCSLLSTVCLSGRFS----LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQA------- 411
           + +L+   C+ G+      LL ++V    +  ++  YN L+   CK G   +A       
Sbjct: 237 YNTLIYGFCIVGKLKEAIGLLNEMVLK-TINPNVYTYNILVDALCKEGKVKEAKSVLAVM 295

Query: 412 --------VKLYNTMLDK--------------------GFTPDNYSFVGLLRGLCGARKI 443
                   V  Y+T++D                     G TPD +++  L+ G C  + +
Sbjct: 296 LKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMV 355

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           DEA+N+++ +   N       +++++D L ++GR      L         P DV++Y+  
Sbjct: 356 DEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSL 415

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           I GL + G  + A  L+++MK   + PN +T+ ++L   CK   +K  + + QD++    
Sbjct: 416 IDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGY 475

Query: 564 ELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            L+ +T   +     K      A+  L +M + G IP+
Sbjct: 476 HLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPN 513



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 103/412 (25%), Positives = 193/412 (46%), Gaps = 30/412 (7%)

Query: 61  PSDLIALSFFI--WC----AKQRDYFHD---VQSFD-HMISVVTRLTG---------RFE 101
           P D + L+  I   C     K+  +FHD    Q F  + +S  T + G           +
Sbjct: 126 PPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIK 185

Query: 102 TVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVM 161
            +R I G L +   V+         +     E YG+    F EM   G + +    N ++
Sbjct: 186 FLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGL----FSEMAVKGISADVVTYNTLI 241

Query: 162 DVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFY 217
                +G++   I +L E  L    PN  ++NI +  LCK   V   K V+ +M++    
Sbjct: 242 YGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVK 301

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
           P+V  +  L++ +  +  + +A  +   M  +G +  V+ +T+LI+GF + + +D A  L
Sbjct: 302 PDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNL 361

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
           +++M Q    P +VTY+SLI G  ++   S  +  +D +   G   D++ ++ LID L K
Sbjct: 362 FKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCK 421

Query: 338 MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVV 394
            G  D A+ +++ + + ++ P+ +TF  LL  +C  GR     ++   L  +    ++  
Sbjct: 422 NGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYT 481

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
           YN +++  CK G   +A+ + + M D G  P+ ++F  ++  L    + D+A
Sbjct: 482 YNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKA 533



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/329 (22%), Positives = 146/329 (44%), Gaps = 38/329 (11%)

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
           ++ +D A   + +M+    +P ++ +  ++  F + K +S A S    LE +G  PDL+ 
Sbjct: 37  IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLIT 96

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR------------ 375
            N+LI+C   MG       V   +L+    PD+ T  +L+  +CL G+            
Sbjct: 97  LNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLL 156

Query: 376 ----------FSLLPKLVC----------------GLEVEADLVVYNALLSYFCKAGFPN 409
                     ++ L   VC                G   + D+V+YN ++   CK    +
Sbjct: 157 AQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVS 216

Query: 410 QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
           +A  L++ M  KG + D  ++  L+ G C   K+ EAI +   +V+     N + +  +V
Sbjct: 217 EAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILV 276

Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
           D L + G+  +A  +    +      DV++Y+  + G       ++A  +++ M  + V 
Sbjct: 277 DALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVT 336

Query: 530 PNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           P+ +TY +++  FCK + +     L +++
Sbjct: 337 PDVHTYTILINGFCKNKMVDEALNLFKEM 365


>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
          Length = 668

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 116/522 (22%), Positives = 227/522 (43%), Gaps = 5/522 (0%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D  ++  +I V+    GR      ++ ++ R GC     T+ + L    +   +   +  
Sbjct: 141 DAYTYTPLIRVLCD-RGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAV 199

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE----TQLPNFLSFNIALCNLCK 197
            DEM   G TPN    N++++ + + GRVD    +L         P+ +S+   L  LC 
Sbjct: 200 LDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCA 259

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
                +V+++   M+ K   PN   F++L+  FC+ G +  A Q+L  M     + +   
Sbjct: 260 SKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTL 319

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
             ++I+   +  R+D A      M   GC+P+ ++YT+++KG   A+ ++ A   L  + 
Sbjct: 320 CNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMV 379

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
                P+ V  N  I  L + G  + A+ + + + E        T+ +L++  C+ G   
Sbjct: 380 RNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHID 439

Query: 378 LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
              +L   +  + + + Y  LL+  C A   + A +L   ML +   P+  +F  L+   
Sbjct: 440 SALELFRSMPCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFF 499

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
           C    +DEAI + + ++ +    N   +  + D + +      A++L    + +    DV
Sbjct: 500 CQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDV 559

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
           ++++  I  L +  R EEA  ++   + I + P A  Y  +LL  CK   I      L  
Sbjct: 560 ITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAY 619

Query: 558 VIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLI 599
           ++      +  T I L + + +      A + L  +C+ G++
Sbjct: 620 MVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRGVV 661



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/473 (22%), Positives = 202/473 (42%), Gaps = 10/473 (2%)

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNI 190
           YG +  A   +G     P+ +    ++ VL   GRV   + +L    +    PN +++ +
Sbjct: 123 YGHLDAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTV 182

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            L  +CK +       V+  M  KG  PN+  + +++N  C+ GR+ +A  LL  + + G
Sbjct: 183 LLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYG 242

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
                 ++T L+ G    +R D    L+ +M++  C PN VT+  LI+ F    M   A 
Sbjct: 243 CQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAI 302

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
             L  +     A +    N++I+ + K G  DDA    + +      PD+ ++ ++L  +
Sbjct: 303 QVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGL 362

Query: 371 CLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           C + R++   +L+  +       + V +N  +   C+ G   QA+ L   M + G T   
Sbjct: 363 CRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGV 422

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
            ++  L+ G C    ID A+ +++ +       N   +T ++  L  A R   A +L   
Sbjct: 423 VTYNALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAERLDAAAELVAE 479

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN 547
            +    P +VV++ V +    + G  +EA  L  QM      PN  TY  +     K+ +
Sbjct: 480 MLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCS 539

Query: 548 IKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
            +    LL  ++   +  D  T   +   + K      A+       ++G+ P
Sbjct: 540 SEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRP 592



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 125/531 (23%), Positives = 223/531 (41%), Gaps = 50/531 (9%)

Query: 127 RIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP--- 183
           R+  R ++ G          R G  P+ +    ++  L + GR     +VL+  +     
Sbjct: 48  RLIAREDLAGAARLVELSASRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSP 107

Query: 184 -NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
            +  ++N  +   C+   +   + +IG M      P+   +  L+   C  GR+A+A  L
Sbjct: 108 VDVFAYNTLVAGYCRYGHLDAARRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADALSL 164

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           L  M+  G   +V  +TVL++   +    + A  + ++M   GC+PN+VTY  +I G   
Sbjct: 165 LDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCR 224

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
                 A   L+ L S G  PD V +  L+  L     +DD  +++  ++E   +P+  T
Sbjct: 225 EGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVT 284

Query: 363 FCSLLSTVCLSG---RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
           F  L+   C  G   R   + + +   E   +  + N +++  CK G  + A K  N M 
Sbjct: 285 FDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMG 344

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVN------------------ 461
             G  PD  S+  +L+GLC A + ++A  + + +V NN   N                  
Sbjct: 345 SYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIE 404

Query: 462 ----------AH-------VHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
                      H        + A+V+     G    A++LFR    +    + ++YT  +
Sbjct: 405 QAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKP---NTITYTTLL 461

Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
            GL    R + A  L ++M H   PPN  T+ V++  FC++  +     L++ +++    
Sbjct: 462 TGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCT 521

Query: 565 LDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD--EMWRKLGLLSDE 613
            +  T   L   I K  SS  A+  L  + + G+ PD       +G+LS E
Sbjct: 522 PNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKE 572



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 111/552 (20%), Positives = 228/552 (41%), Gaps = 84/552 (15%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV +++ +++   R  G  +  R ++G +        A T+   +R+          L  
Sbjct: 109 DVFAYNTLVAGYCRY-GHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSL 164

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
            D+M R G  PN     ++++ + K    +  + VL E +     PN +++N+ +  +C+
Sbjct: 165 LDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCR 224

Query: 198 LNDVSNVKDVI-----------------------------------GMMVRKGFYPNVRM 222
              V + +D++                                     M+ K   PN   
Sbjct: 225 EGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVT 284

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMI----------------------------------- 247
           F++L+  FC+ G +  A Q+L  M                                    
Sbjct: 285 FDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMG 344

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
           + G +    ++T ++ G  R  R + A  L ++MV+N C PN VT+ + I    +  +  
Sbjct: 345 SYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIE 404

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A   ++ ++  G    +V +N L++     G  D AL+++     +   P++ T+ +LL
Sbjct: 405 QAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRS---MPCKPNTITYTTLL 461

Query: 368 STVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
           + +C + R     +LV  +   +   ++V +N L+++FC+ GF ++A++L   M++ G T
Sbjct: 462 TGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCT 521

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           P+  ++  L  G+      ++A+ +  G+V    + +    ++I+  L +  R  +AIQ+
Sbjct: 522 PNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQM 581

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
           F  A         + Y   + GL +    + A    + M      PN  TY +++    +
Sbjct: 582 FHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAR 641

Query: 545 ERNIKMVKRLLQ 556
           E  +K  + LL 
Sbjct: 642 EGLLKEAQDLLS 653


>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 889

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 120/490 (24%), Positives = 224/490 (45%), Gaps = 19/490 (3%)

Query: 125 FLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKET 180
            +R +   EM    LE    M   G  P+     I+  +L ++G       L   V++  
Sbjct: 202 LMRAFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRG 261

Query: 181 QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAY 240
             P   +F+  +   C+   +   + ++ +M +    PN   + I++N  C  GR ++A 
Sbjct: 262 PQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDAL 321

Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
               LMI  G + +V  +  +I+ F +   +  A  L++ + + G SPN + Y +L+ G+
Sbjct: 322 AWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGY 381

Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
           ++ +    A    + +  +G APD +  N+L+    K G  +D   +   +  L L+PD 
Sbjct: 382 VKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDR 441

Query: 361 YTFCSLLSTVCLSGRFS-----LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLY 415
             F   +S +C +GR       L+  L  GL     ++ +N++++ + +AG  ++A + Y
Sbjct: 442 SLFDISVSGLCWAGRLDEAMEFLMDMLEKGL--SPSIIAFNSVIAAYSQAGLEDKAFEAY 499

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
             M+  G TP   +   LL GL    ++ EA  +   ++    +VN    T ++D+  + 
Sbjct: 500 KLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKR 559

Query: 476 GRCHKAIQLF----RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
           G    A  L+    RR I   +P DVV+++  I GL + G  EEAY ++ +M    + PN
Sbjct: 560 GDVVGAQSLWGEMERRGI---FP-DVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPN 615

Query: 532 AYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLV 591
            + Y  ++  FCK   +    +L + +    +  D  T+  +   + K     SA+N  +
Sbjct: 616 NFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFM 675

Query: 592 EMCNLGLIPD 601
           +M   GL PD
Sbjct: 676 DMHQTGLSPD 685



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 130/574 (22%), Positives = 234/574 (40%), Gaps = 85/574 (14%)

Query: 70  FIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIY 129
           F+W      Y  D    D ++         F+ +  I+G +  VG    A    +  ++ 
Sbjct: 184 FMWRGHHV-YESDFSVLDSLMRAFVNAEMGFQALE-ILGRMREVGVRPSASGVAILFKLL 241

Query: 130 WRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNF 185
            R   YG V + F ++ R G  P  +  + ++    + G + LG  +L    K    PN 
Sbjct: 242 LRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNA 301

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGL 245
            ++NI +   C     S+      +M+ +G  P V  F  ++N FCK G + EA +L   
Sbjct: 302 FAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDG 361

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG------ 299
           +  +G S +   +  L++G+ ++R +D A  L+E+M + G +P+ +T+  L+ G      
Sbjct: 362 LKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGR 421

Query: 300 ----------------FMEAKMFSIAFS--------------FLDMLESEGHAPDLVFHN 329
                             +  +F I+ S               +DMLE +G +P ++  N
Sbjct: 422 EEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLE-KGLSPSIIAFN 480

Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVC----- 384
            +I   S+ G  D A + Y  ++   L P   T  SLL  + ++GR     +L+      
Sbjct: 481 SVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEK 540

Query: 385 GLEVE---------------------------------ADLVVYNALLSYFCKAGFPNQA 411
           GL V                                   D+V ++A +    K G   +A
Sbjct: 541 GLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEA 600

Query: 412 VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTA--IV 469
             ++  ML KG  P+N+++  L+ G C   K++EA+ + +  VM +  +   + T   I+
Sbjct: 601 YNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEK--VMRHRGLLPDIFTTNMII 658

Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
             L + GR   AI +F          D+++Y   I G  +      A  L ++M      
Sbjct: 659 GGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSN 718

Query: 530 PNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           P+  TY + +  FC  R +     +L +++ A I
Sbjct: 719 PDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGI 752



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/422 (24%), Positives = 188/422 (44%), Gaps = 39/422 (9%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           ++EM + G  P+    NI++   +K GR + G ++LK+      LP+   F+I++  LC 
Sbjct: 394 YEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCW 453

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              +    + +  M+ KG  P++  F  ++  + + G   +A++   LM+  G + S + 
Sbjct: 454 AGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPST 513

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
            + L+ G     RL  A  L  +M++ G S N + +T L+  F +      A S    +E
Sbjct: 514 CSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEME 573

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G  PD+V  +  ID LSK G  ++A +V+  +L   L+P+++ + S            
Sbjct: 574 RRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNS------------ 621

Query: 378 LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
               L+CG                FCK G  N+A+KL   M  +G  PD ++   ++ GL
Sbjct: 622 ----LICG----------------FCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGL 661

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
           C   ++  AINV+  +     + +   +  +++   +A     A  L  R        D+
Sbjct: 662 CKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDL 721

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK---ERNIKMVKRL 554
            +Y + I G     R   A ++  ++    + PN  TY  ML   C    +R + +  RL
Sbjct: 722 TTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVCSDILDRAMILTARL 781

Query: 555 LQ 556
           L+
Sbjct: 782 LK 783



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 139/286 (48%), Gaps = 9/286 (3%)

Query: 136 GMVLEAFDEMGRF---GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSF 188
           G + EA + +G+    G + N  A  +++D  FK G V     +  E +     P+ ++F
Sbjct: 525 GRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAF 584

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           +  +  L K   V    +V   M+RKG  PN   +  L+  FCK G++ EA +L  +M  
Sbjct: 585 SAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRH 644

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
            G    +    ++I G  +  R+  A  ++  M Q G SP+++TY +LI G+ +A     
Sbjct: 645 RGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVN 704

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A + ++ + + G  PDL  +N+ I         + A+ + D L+   +VP++ T+ S+L+
Sbjct: 705 ADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLN 764

Query: 369 TVC--LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAV 412
            VC  +  R  +L   +  +    ++V  N LLS F K G P + +
Sbjct: 765 GVCSDILDRAMILTARLLKMAFVPNVVTANLLLSQFYKQGMPERTL 810


>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 920

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/430 (24%), Positives = 201/430 (46%), Gaps = 35/430 (8%)

Query: 119 AQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK 178
           A +F L LR +         L  FD MG+ G  P+  + N +++ L + G  D G+  + 
Sbjct: 148 AVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSG--DPGMAAM- 204

Query: 179 ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAE 238
                                       V G M   G  P+     I+   +C+ GR+A+
Sbjct: 205 ----------------------------VYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQ 236

Query: 239 AYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIK 298
           A + +  M  +G  +++ A+  ++D +  +   + A  + E + + G SPNVVTYT L+K
Sbjct: 237 AVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVK 296

Query: 299 GF-MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
           G+  + +M        +M E+     D V + ++I+   + G  DDA  V + + +  + 
Sbjct: 297 GYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIH 356

Query: 358 PDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKL 414
            + + + ++++ +C  GR   + K++  +E   +  D   YN L+  +C+ G   +A ++
Sbjct: 357 VNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEM 416

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
              M+  G      ++  LL+G C    ID+A+ ++  ++    A N    + ++D L +
Sbjct: 417 CRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFK 476

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
           AG+  +A+ L++  +      +V+++   I GL + GR  EA  L  +MK +  PP++ T
Sbjct: 477 AGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLT 536

Query: 535 YRVMLLSFCK 544
           YR +   +CK
Sbjct: 537 YRTLFDGYCK 546



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/434 (23%), Positives = 204/434 (47%), Gaps = 26/434 (5%)

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLND 200
           M + G  PN  + + ++D LFK G+ +  + + KET       N ++FN  +  LCK+  
Sbjct: 455 MLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGR 514

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
           ++  ++++  M      P+   +  L + +CK+G++  A  L+  M  LG + SV  +  
Sbjct: 515 MAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNS 574

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
            I G    ++      +  +M   G SPN+VTY +LI G+ +      A +    + + G
Sbjct: 575 FITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNG 634

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
             P++   + L+ C  K G  D+A  V   L+ + ++P     CS+ ST+ +     ++ 
Sbjct: 635 MNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPG----CSI-STIEIDKISHVVD 689

Query: 381 KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
            +  G    A+ V++N ++   CK+G    A  L+ ++ +K F PDN+++  L+ G   +
Sbjct: 690 TIADGNPHSAN-VMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAAS 748

Query: 441 RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSY 500
             IDEA ++   ++      N   + +++  L ++G+  +A+ LF +   +    + ++Y
Sbjct: 749 GSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITY 808

Query: 501 TVAI----------------RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
              I                + ++E G  EEA  L  QM    V PN  TY  ++  + K
Sbjct: 809 NTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIK 868

Query: 545 ERNIKMVKRLLQDV 558
             N++ + +L  ++
Sbjct: 869 SGNMEEISKLYDEM 882



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 117/516 (22%), Positives = 211/516 (40%), Gaps = 69/516 (13%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFG-FTPNTFA 156
           G  E  R I+  L R G      T+ L ++ Y +            EM   G    +  A
Sbjct: 267 GWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVA 326

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQLP----NFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
             ++++   + GR+D   +V  E +      N   +N  +  LCKL  +  V+ V+  M 
Sbjct: 327 YGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEME 386

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
             G  P+   +  L++ +C+ G + +A+++  +M+  G + +   +  L+ GF  L  +D
Sbjct: 387 DVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAID 446

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A  LW  M++ G +PN ++ ++L+ G  +A     A +      + G A +++  N +I
Sbjct: 447 DALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVI 506

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE----- 387
           + L K+G   +A ++ D + EL+  PDS T+ +L    C  G+      L+  +E     
Sbjct: 507 NGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFA 566

Query: 388 ---------------------------------VEADLVVYNALLSYFCKAGFPNQAVKL 414
                                            +  +LV Y AL++ +CK G  ++A  L
Sbjct: 567 PSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNL 626

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR--- 471
           Y  M++ G  P+ +    L+       K+DEA  V Q +V  +      + T  +D+   
Sbjct: 627 YFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISH 686

Query: 472 -----------------------LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
                                  L ++GR   A  LF     +++  D  +Y+  I G  
Sbjct: 687 VVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCA 746

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
             G  +EA+ L   M    + PN  TY  ++   CK
Sbjct: 747 ASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCK 782



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 105/514 (20%), Positives = 221/514 (42%), Gaps = 18/514 (3%)

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           + G++   G +    T  +  + Y R       +E  +EM   G   N  A + VMD   
Sbjct: 205 VYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYC 264

Query: 166 KIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG-FYPNV 220
            +G  +   ++L+  Q     PN +++ + +   CK   +   + V+  M   G    + 
Sbjct: 265 GMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDE 324

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
             + +++N +C+ GR+ +A ++   M   G  +++  +  +I+G  +L R++    + ++
Sbjct: 325 VAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQE 384

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           M   G  P+  +Y +LI G+        AF    M+   G A   + +N L+     + +
Sbjct: 385 MEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHA 444

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL---LPKLVCGLEVEADLVVYNA 397
            DDAL ++  +L+  + P+  +  +LL  +  +G+      L K      +  +++ +N 
Sbjct: 445 IDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNT 504

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
           +++  CK G   +A +L + M +    PD+ ++  L  G C   ++  A ++   +    
Sbjct: 505 VINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLG 564

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAY 517
            A +  +  + +     A + HK   +           ++V+Y   I G  + G   EA 
Sbjct: 565 FAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEAC 624

Query: 518 ILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID---------ARIELDYH 568
            LY +M +  + PN +    ++  F KE  +     +LQ +++         + IE+D  
Sbjct: 625 NLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKI 684

Query: 569 TSIRLTKFIFKFHSSSSAVNQLV-EMCNLGLIPD 601
           + +  T      HS++   N ++  +C  G I D
Sbjct: 685 SHVVDTIADGNPHSANVMWNVIIFGLCKSGRIAD 718



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 90/403 (22%), Positives = 167/403 (41%), Gaps = 54/403 (13%)

Query: 77  RDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYG 136
           R    +V +F+ +I+ + ++ GR      ++  +  + C   + T+      Y +    G
Sbjct: 493 RGLAKNVITFNTVINGLCKI-GRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLG 551

Query: 137 MVLEAFDEMGRFGFTP-----NTF-ARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNI 190
                 ++M   GF P     N+F   + +     K+   D+  ++      PN +++  
Sbjct: 552 TATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVN--DIHSEMSARGLSPNLVTYGA 609

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL- 249
            +   CK  ++    ++   MV  G  PNV +   L++CF K G++ EA  +L  ++ + 
Sbjct: 610 LIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNID 669

Query: 250 ------------------------GTSLSVNA-WTVLIDGFRRLRRLDMAGYLWEKMVQN 284
                                   G   S N  W V+I G  +  R+  A  L+E +   
Sbjct: 670 MIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNK 729

Query: 285 GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
              P+  TY+SLI G   +     AFS  D++ S G  P+++ +N LI  L K G    A
Sbjct: 730 RFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRA 789

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLV---------------CG 385
           +++++ L    + P+  T+ +L+   C  G+    F L  K+V                 
Sbjct: 790 VNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIE 849

Query: 386 LEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
             V+ + + Y  L+  + K+G   +  KLY+ M  +G  P N+
Sbjct: 850 NNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNW 892



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 72/323 (22%), Positives = 152/323 (47%), Gaps = 12/323 (3%)

Query: 289 NVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVY 348
           + V++  L++   +A   S A +  D +   G  P L   N L++ L + G    A  VY
Sbjct: 147 SAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVY 206

Query: 349 DGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV---CGLEVEADLVVYNALLSYFCKA 405
             +    ++PD +T   +    C  GR +   + V    G+ +E +LV Y+A++  +C  
Sbjct: 207 GQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGM 266

Query: 406 GFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV-MNNPAVNAHV 464
           G+   A ++  ++  KG +P+  ++  L++G C   +++EA  V + +    +  V+   
Sbjct: 267 GWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVA 326

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
           +  +++   + GR   A ++          +++  Y   I GL + GR EE   +  +M+
Sbjct: 327 YGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEME 386

Query: 525 HIAVPPNAYTYRVMLLSFCKERNIK----MVKRLLQDVIDARIELDYHTSIRLTKFIFKF 580
            + + P+ Y+Y  ++  +C+E +++    M + ++++ + A   L Y+T   L K     
Sbjct: 387 DVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGL-AATTLTYNT---LLKGFCSL 442

Query: 581 HSSSSAVNQLVEMCNLGLIPDEM 603
           H+   A+     M   G+ P+E+
Sbjct: 443 HAIDDALRLWFLMLKRGVAPNEI 465


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 134/514 (26%), Positives = 227/514 (44%), Gaps = 54/514 (10%)

Query: 124 LFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKE 179
           + LR+  R    G+V   F+ +      PN F  NIV+D L K G +     L +++   
Sbjct: 174 ILLRL-ARNRQGGLVRRLFEHLP----APNVFTFNIVIDFLCKQGELVEARALFVRMKAM 228

Query: 180 TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEA 239
              P+ +++N  +    K  ++  V+ ++  M + G   +V  +  L+NCF K G I +A
Sbjct: 229 GCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKA 288

Query: 240 YQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG 299
           Y   G M  LG   +V   +  +D F +   +  A  L+ +M   G  PN  TYTSL+ G
Sbjct: 289 YSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDG 348

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY---DD------------- 343
             +A     A   LD +  +G  P++V + V++D L K G     DD             
Sbjct: 349 TCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKAN 408

Query: 344 -------------------ALDVYDGLLELKLVPDSYTFCSLLSTVC----LSGRFSLLP 380
                              ALD+ + +    +  D   + +L+  +C    L    SLL 
Sbjct: 409 ELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLH 468

Query: 381 KLV-CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
           K+  CGL    + V+Y  ++  F KAG  ++AV L + + D G  P+  ++  L+ GLC 
Sbjct: 469 KMDDCGLR--PNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCK 526

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
           A  I EAI+ +  +       N  V+T ++D   + G   KA+ L    + +   LD V 
Sbjct: 527 AGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVV 586

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           YT  I G ++ G  + A+ L ++M    +  + Y Y   +  FC    ++  + +L ++I
Sbjct: 587 YTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMI 646

Query: 560 DARIELD---YHTSIRLTKFIFKFHSSSSAVNQL 590
              I  D   Y+  IR  + +     +SS  N++
Sbjct: 647 GTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEM 680



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 126/499 (25%), Positives = 219/499 (43%), Gaps = 58/499 (11%)

Query: 119 AQTFLLFLRIYWRGEMYGMVLEAFDEMGR--FGFTPNTFARNIVMDVLFKI----GRVDL 172
           A +  L  R+   G    +     D + R      P+  A   V D L  +    G +D 
Sbjct: 92  AHSRRLLSRLLGAGHRPHLAASLVDILHRAALALGPHRSALPSVFDTLLSLLADHGLLDD 151

Query: 173 GIKVL---KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF----YPNVRMFEI 225
            ++ L   ++ ++P     N   CN   L    N +   G +VR+ F     PNV  F I
Sbjct: 152 AVRALARVRQLRVPP----NTRTCNHILLRLARNRQ---GGLVRRLFEHLPAPNVFTFNI 204

Query: 226 LLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
           +++  CK G + EA  L   M  +G S  V  +  LIDG+ +   L+    L  +M ++G
Sbjct: 205 VIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSG 264

Query: 286 CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL 345
           C+ +VVTY +LI  F +      A+S+   ++  G   ++V  +  +D   K G   +A+
Sbjct: 265 CAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAM 324

Query: 346 DVYDGLLELKLVPDSYTFCSLLSTVCLSGRF-------------SLLPKLVC------GL 386
            ++  +    ++P+ +T+ SL+   C +GR               L+P +V       GL
Sbjct: 325 KLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGL 384

Query: 387 EVEADLVVYNALLSYFCKAG---------------FPNQ----AVKLYNTMLDKGFTPDN 427
             E  + V + +LS   +AG               F N+    A+ L N M +KG   D 
Sbjct: 385 CKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDV 444

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
             +  L+ GLC  +K+DEA ++   +       N  ++T I+D   +AG+  +A+ L  +
Sbjct: 445 SLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHK 504

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN 547
                   +VV+Y   I GL + G   EA   + +M+ + + PN   Y  ++  FCK  +
Sbjct: 505 IPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGS 564

Query: 548 IKMVKRLLQDVIDARIELD 566
           +     L+ +++D  + LD
Sbjct: 565 LSKAVHLMNEMVDKGMSLD 583



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 113/449 (25%), Positives = 192/449 (42%), Gaps = 37/449 (8%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV +++ +I+  ++  G  E      GE+ R+G +    T   F+  + +  +    ++ 
Sbjct: 268 DVVTYNALINCFSKF-GWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKL 326

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           F +M   G  PN F    ++D   K GR+D  I +L E      +PN +++ + +  LCK
Sbjct: 327 FAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCK 386

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              V+   DV+ +M R G   N  ++  L++          A  LL  M   G  L V+ 
Sbjct: 387 EGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSL 446

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  LI G  ++++LD A  L  KM   G  PN V YT+++  F +A   S A + L  + 
Sbjct: 447 YGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIP 506

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G  P++V +  LID L K GS  +A+  +D + EL L P                   
Sbjct: 507 DSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDP------------------- 547

Query: 378 LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
                        ++ VY  L+  FCK G  ++AV L N M+DKG + D   +  L+ G 
Sbjct: 548 -------------NVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGH 594

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
                +  A  +   ++     ++ + +T  +          +A  +    I      D 
Sbjct: 595 MKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDK 654

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
            +Y   IR   + G  EEA  L ++M+ +
Sbjct: 655 TAYNCLIRKYQKLGNMEEASSLQNEMESV 683



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 114/495 (23%), Positives = 214/495 (43%), Gaps = 46/495 (9%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV +++ +I    +  G  E V  +V E+ + GC     T+   +  + +   +G + +A
Sbjct: 233 DVVTYNSLIDGYGK-CGELEEVELLVSEMRKSGCAADVVTYNALINCFSK---FGWIEKA 288

Query: 142 ---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCN 194
              F EM R G   N    +  +D   K G V   +K+  + +    +PN  ++   +  
Sbjct: 289 YSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDG 348

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
            CK   + +   ++  MV +G  PNV  + ++++  CK G++A A  +L LM   G   +
Sbjct: 349 TCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKAN 408

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
              +T LI G    +  + A  L  +M   G   +V  Y +LI G  + +    A S L 
Sbjct: 409 ELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLH 468

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            ++  G  P+ V +  ++D   K G   +A+ +      L  +PDS              
Sbjct: 469 KMDDCGLRPNTVIYTTIMDAFFKAGKESEAVAL------LHKIPDS-------------- 508

Query: 375 RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
                     GL+   ++V Y AL+   CKAG   +A+  ++ M + G  P+   +  L+
Sbjct: 509 ----------GLQ--PNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLI 556

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            G C    + +A+++   +V    +++  V+T+++D  ++ G    A  L  + I     
Sbjct: 557 DGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQ 616

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
           LD+  YT  I G       +EA  + S+M    + P+   Y  ++  + K  N++    L
Sbjct: 617 LDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSL 676

Query: 555 ---LQDVIDARIELD 566
              ++ V+ +  E D
Sbjct: 677 QNEMESVLSSCTEED 691



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 81/321 (25%), Positives = 134/321 (41%), Gaps = 44/321 (13%)

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPK 381
           AP++   N++ID L K G   +A  ++  +  +   PD  T+ SL+      G    +  
Sbjct: 196 APNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVEL 255

Query: 382 LVCGLE---VEADLVVYNALL-------------SY----------------------FC 403
           LV  +      AD+V YNAL+             SY                      FC
Sbjct: 256 LVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFC 315

Query: 404 KAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAH 463
           K G   +A+KL+  M  +G  P+ +++  L+ G C A ++D+AI +   +V      N  
Sbjct: 316 KEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVV 375

Query: 464 VHTAIVDRLIEAGRCHKA---IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
            +T +VD L + G+   A   + L  RA V+   L    YT  I G      +E A  L 
Sbjct: 376 TYTVMVDGLCKEGKVAVADDVLSLMERAGVKANEL---LYTTLIHGHFMNKNSERALDLL 432

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKF 580
           ++MK+  +  +   Y  ++   CK + +   K LL  + D  +  +      +    FK 
Sbjct: 433 NEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKA 492

Query: 581 HSSSSAVNQLVEMCNLGLIPD 601
              S AV  L ++ + GL P+
Sbjct: 493 GKESEAVALLHKIPDSGLQPN 513


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 137/593 (23%), Positives = 257/593 (43%), Gaps = 60/593 (10%)

Query: 31  ISSPKVCATTHQDFPIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMI 90
           + SPK  A +   F +++     +S L N      A+  F+  AK+       +S + ++
Sbjct: 169 LESPKDAARSVIVFDLLIKVFAANSMLEN------AVDVFLQ-AKKTGLELSTRSCNFLL 221

Query: 91  SVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYG-------MVLEAFD 143
             +     R E +R +  E+   G      T+ + +  Y +G  +G          E  +
Sbjct: 222 KCLAE-ANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGN-FGEADIDTRQATEILE 279

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE----TQLPNFLSFNIALCNLCKLN 199
           EM R G +P     +  +  L ++G V+  +  ++       L N   +N  +  LCK  
Sbjct: 280 EMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKG 339

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM------------- 246
           ++     V+  M   G  P+V  + IL++ FCK G + +   L+  M             
Sbjct: 340 ELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYS 399

Query: 247 -------------ITL---------GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN 284
                        I+L         G      A+++LI GF     LD A  L E+MV+N
Sbjct: 400 SLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRN 459

Query: 285 GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
             +P+   + SL+ GF +  ++  A  F +M+   G  P +   NV+ID   + G  ++A
Sbjct: 460 NLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEA 519

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNALLS 400
           L++ + +    + P+ +T+ ++++ +C   +      L P L+    V   +VVY+ L+ 
Sbjct: 520 LNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFP-LMLKRNVLPSVVVYSTLID 578

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
            F K     +A+ LY  ML  G TPD  ++  L+  LC   ++ EA N+++ +  N    
Sbjct: 579 GFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTP 638

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
           +   +T+++      G   KA  LF   +   +   VV+YT  + G  +  R + A +L 
Sbjct: 639 DKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLI 698

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
            +MK   + P+  TY V++ +  +  N+     +L ++ +  +  D+ T + L
Sbjct: 699 DEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMTYMML 751



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 113/489 (23%), Positives = 218/489 (44%), Gaps = 14/489 (2%)

Query: 69  FFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRI 128
           F I     +D    V  FD +I V        E    +  +  + G  +  ++    L+ 
Sbjct: 165 FPILLESPKDAARSVIVFDLLIKVFA-ANSMLENAVDVFLQAKKTGLELSTRSCNFLLKC 223

Query: 129 YWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK--IGRVDL----GIKVLKETQL 182
                    +   F+EM   G  PN F   I+M+   K   G  D+      ++L+E + 
Sbjct: 224 LAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMER 283

Query: 183 ----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAE 238
               P  ++++  +  LC++  V +  D +  ++      NV  +  +++  CK G + E
Sbjct: 284 NGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDE 343

Query: 239 AYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIK 298
           A ++L  M + G S  V  +++LI GF +   ++   YL E+M  +   P++V+Y+SL  
Sbjct: 344 ALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFH 403

Query: 299 GFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP 358
           G  + ++  I+      L + G+  D   +++LI      G  D A  + + ++   L P
Sbjct: 404 GLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAP 463

Query: 359 DSYTFCSLLSTVCLSGRF-SLLPKLVCGLE--VEADLVVYNALLSYFCKAGFPNQAVKLY 415
           D   F SL+   C  G + + L      LE  +   +   N ++   C+ G   +A+ L 
Sbjct: 464 DPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLM 523

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
           N M  +G  P+ +++  ++  LC  RK + A+ ++  ++  N   +  V++ ++D   + 
Sbjct: 524 NEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQ 583

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
               KA+ L+ R +      D+V+YT+ I  L    R  EAY L+ +M    + P+  +Y
Sbjct: 584 SNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISY 643

Query: 536 RVMLLSFCK 544
             ++  FC+
Sbjct: 644 TSVIAGFCR 652


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 111/458 (24%), Positives = 209/458 (45%), Gaps = 9/458 (1%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDV 207
           PN +  N ++      G+    ++V KE +    LP+ ++ ++ + +LCK   +   +DV
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 346

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
              M  KG  P+V  + I+LN +   G + +   L  LM+  G +     + VLI  +  
Sbjct: 347 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYAN 406

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
              LD A  ++ +M  +G  P+VVTY ++I           A    + +  +G APD   
Sbjct: 407 CGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 466

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF---SLLPKLVC 384
           +N LI      GS   A ++   ++   +  D   F S+++ +C  GR      +  L  
Sbjct: 467 YNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTV 526

Query: 385 GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
            + +  D VVY+ L+  +C  G   +A+++++ M+  G  P+   +  L+ G C   +ID
Sbjct: 527 NVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRID 586

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
           E +++++ ++      +  +++ I+D L +AGR   A   F         +D+ +Y + +
Sbjct: 587 EGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVL 646

Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
           RGL +    +EA  L+ +++ + V  N  T   M+    + R ++  K L   +  +R+ 
Sbjct: 647 RGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLV 706

Query: 565 LDYHT-SIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
               T SI +T  I K      A +    M N G  P+
Sbjct: 707 PSVVTYSIMITNLI-KEGLVEEAEDMFSSMQNAGCEPN 743



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 111/487 (22%), Positives = 208/487 (42%), Gaps = 42/487 (8%)

Query: 129 YWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPN 184
           Y     +   +  F EM R    P+    +++M  L K G++     V      + Q P+
Sbjct: 299 YSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPD 358

Query: 185 FLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLG 244
             S+NI L        + ++ D+  +M+  G  P+   F +L+  +   G + +A  +  
Sbjct: 359 VFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFN 418

Query: 245 LMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
            M   G    V  +  +I    R+ ++D A   + +M+  G +P+   Y  LI+GF    
Sbjct: 419 EMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHG 478

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
               A   +  + + G   D+VF + +I+ L K+G   DA +++D  + + L PD+  + 
Sbjct: 479 SLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYS 538

Query: 365 SLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
            L+   CL G+     ++   +    +E ++VVY  L++ +CK G  ++ + L+  ML +
Sbjct: 539 MLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQR 598

Query: 422 GFTPDN--YSFV--GL-------------------------------LRGLCGARKIDEA 446
           G  P    YS +  GL                               LRGL   R  DEA
Sbjct: 599 GIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEA 658

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
           I +++ +   N  +N      ++D + +  R  +A  LF      +    VV+Y++ I  
Sbjct: 659 IFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITN 718

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           L++ G  EEA  ++S M++    PN+     ++    K+  I      L  + +    L+
Sbjct: 719 LIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLE 778

Query: 567 YHTSIRL 573
           + T++ L
Sbjct: 779 HLTTMLL 785



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/478 (21%), Positives = 200/478 (41%), Gaps = 44/478 (9%)

Query: 113 VGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGF--TPNTFARNIVMDVLFKIGRV 170
           +GCV    ++ + L+        G   +    M   G   +PN  A N V+D  FK G V
Sbjct: 176 LGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDV 235

Query: 171 DLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEIL 226
           +    + KE       P+ +++N  +  LCK   +   +  +  MV K   PN   +  L
Sbjct: 236 NKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNL 295

Query: 227 LNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGC 286
           +  +   G+  EA ++   M        V   ++L+    +  ++  A  +++ M   G 
Sbjct: 296 IYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQ 355

Query: 287 SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI----DC-------- 334
           +P+V +Y  ++ G+             D++  +G APD    NVLI    +C        
Sbjct: 356 NPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMI 415

Query: 335 -----------------------LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
                                  L ++G  DDA++ ++ +++  + PD Y +  L+   C
Sbjct: 416 IFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFC 475

Query: 372 LSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
             G      +L+  +    +  D+V ++++++  CK G    A  +++  ++ G  PD  
Sbjct: 476 THGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAV 535

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
            +  L+ G C   K+++A+ V+  +V      N  V+  +V+   + GR  + + LFR  
Sbjct: 536 VYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREM 595

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
           +        + Y++ I GL + GRT  A + + +M    +  +  TY ++L    K R
Sbjct: 596 LQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNR 653



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/425 (21%), Positives = 175/425 (41%), Gaps = 41/425 (9%)

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD----- 272
           P    + IL++C  +  R   A    G ++  G  +++     L++GF   +R D     
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 168

Query: 273 -------------------------------MAGYLWEKMVQNG--CSPNVVTYTSLIKG 299
                                           A  L   M + G  CSPNVV Y ++I G
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDG 228

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
           F +    + A      +   G  PDLV +N ++  L K  + D A      ++  +++P+
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 288

Query: 360 SYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYN 416
           ++T+ +L+     +G++    ++   +   +   D+V  + L+   CK G   +A  +++
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 348

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
           TM  KG  PD +S+  +L G      + +  +++  ++ +  A + +    ++      G
Sbjct: 349 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCG 408

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
              KA+ +F          DVV+Y   I  L   G+ ++A   ++QM    V P+ Y Y 
Sbjct: 409 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYN 468

Query: 537 VMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNL 596
            ++  FC   ++   K L+ ++++  + LD      +   + K      A N      N+
Sbjct: 469 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNV 528

Query: 597 GLIPD 601
           GL PD
Sbjct: 529 GLHPD 533



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/321 (23%), Positives = 142/321 (44%), Gaps = 6/321 (1%)

Query: 287 SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALD 346
           SP   TY  L+     A    +A +F   L   G   +++  N L++   +    D+ALD
Sbjct: 108 SPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALD 167

Query: 347 V-YDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV-----CGLEVEADLVVYNALLS 400
           +      EL  VPD +++  LL ++C  G+      L+      G     ++V YN ++ 
Sbjct: 168 ILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVID 227

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
            F K G  N+A  L+  M+ +G  PD  ++  ++  LC AR +D+A    + +V      
Sbjct: 228 GFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLP 287

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
           N   +  ++      G+  +A+++F+         DVV+ ++ +  L + G+ +EA  ++
Sbjct: 288 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVF 347

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKF 580
             M      P+ ++Y +ML  +  +  +  +  L   ++   I  D++T   L K     
Sbjct: 348 DTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANC 407

Query: 581 HSSSSAVNQLVEMCNLGLIPD 601
                A+    EM + G+ PD
Sbjct: 408 GMLDKAMIIFNEMRDHGVKPD 428



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 54/279 (19%), Positives = 111/279 (39%), Gaps = 32/279 (11%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D+  F  +I+ + +L GR    + I      VG    A  + + +  Y         L  
Sbjct: 498 DIVFFSSIINNLCKL-GRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRV 556

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDV 201
           FD M   G  PN      +++   KIGR+D G+ + +E                      
Sbjct: 557 FDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFRE---------------------- 594

Query: 202 SNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVL 261
                    M+++G  P+  ++ I+++   + GR   A      M   G ++ +  + ++
Sbjct: 595 ---------MLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIV 645

Query: 262 IDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH 321
           + G  + R  D A +L++++       N++T  ++I G  + +    A      +     
Sbjct: 646 LRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRL 705

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
            P +V ++++I  L K G  ++A D++  +      P+S
Sbjct: 706 VPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNS 744



 Score = 41.2 bits (95), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 44/210 (20%), Positives = 91/210 (43%), Gaps = 12/210 (5%)

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGR-VDLGIKVLKETQ---LPNFLSFNIAL-- 192
           L  F EM + G  P+T   +I++D LF+ GR V   +K  + T+     +  ++NI L  
Sbjct: 589 LSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRG 648

Query: 193 --CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
              N C    +   K++  M V+     N+     +++   +  R+ EA  L   +    
Sbjct: 649 LFKNRCFDEAIFLFKELRAMNVKI----NIITLNTMIDGMFQTRRVEEAKDLFASISRSR 704

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
              SV  ++++I    +   ++ A  ++  M   GC PN      +++  ++      A 
Sbjct: 705 LVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAG 764

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           ++L  ++    + + +   +L+D  S  G+
Sbjct: 765 AYLSKIDERNFSLEHLTTMLLVDLFSSKGT 794


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 108/472 (22%), Positives = 200/472 (42%), Gaps = 39/472 (8%)

Query: 122 FLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK--------------- 166
           ++  +R Y R       ++AF+ M  F   P   A N +MD L                 
Sbjct: 53  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 112

Query: 167 --------------------IGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKD 206
                                 R  + +++L+       +++   +C L       + + 
Sbjct: 113 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQ 172

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
           +   M+    +PN+  F  +L+  CK G + EA  LLG +I  G S+++  + + I G  
Sbjct: 173 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLC 232

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
              RL  A  L + M      P+VVTY +LI+G  +  M   A  +L  + ++G  PD  
Sbjct: 233 EAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF 291

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL 386
            +N +ID   K+    +A ++    +    VPD  T+CSL++ +C  G      +L    
Sbjct: 292 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 351

Query: 387 E---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
           +   ++ D+VVYN+L+   C  G    A+++ N M ++G  PD  ++  ++ GLC    I
Sbjct: 352 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 411

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
            +A  V    +M     +      ++D   +  +   A+QL  R        D ++Y   
Sbjct: 412 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 471

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
           + GL + G+  E    + +M      PN  TY +++ +FC+   ++   +++
Sbjct: 472 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVI 523



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 118/467 (25%), Positives = 207/467 (44%), Gaps = 10/467 (2%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRV-DLGI---KVLKETQLPNFLSFNIALCNLCK 197
           FD+M      PN  A N V+  L K G V + G+   KV++     N  ++NI +  LC+
Sbjct: 174 FDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCE 233

Query: 198 LNDVSN-VKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
              +   V+ V GM  R    P+V  +  L+   CK     EA   L  M+  G      
Sbjct: 234 AGRLPEAVRLVDGM--RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF 291

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
            +  +IDG+ ++  +  A  L +  V  G  P+ VTY SLI G         A    +  
Sbjct: 292 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 351

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
           +++G  PD+V +N L+  L   G    AL V + + E    PD  T+  +++ +C  G  
Sbjct: 352 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 411

Query: 377 SLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
           S    ++    ++    D+  +N L+  +CK    + A++L   M + G  PD  ++  +
Sbjct: 412 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 471

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           L GLC A K++E    +Q +++     N   +  +++    + +  +A ++  +   E  
Sbjct: 472 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 531

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
             D VS+   I G    G  E AY+L+ +++       A T+  ++ +F  + N+ M ++
Sbjct: 532 HPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEK 591

Query: 554 LLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           +  +++      D +T   L     K  +   A   LVEM   G IP
Sbjct: 592 IFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIP 638



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 99/444 (22%), Positives = 194/444 (43%), Gaps = 44/444 (9%)

Query: 136 GMVLEAFDEMGRF---GFTPNTFARNIVMDVLFKIGRVDLGIKV---LKETQLPNFLSFN 189
           G VLEA   +G+    G + N F  NI +  L + GR+   +++   ++   +P+ +++N
Sbjct: 200 GDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYN 259

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
             +  LCK +        +  M+ +G  P+   +  +++ +CK+  + EA +LL   +  
Sbjct: 260 TLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFK 319

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           G       +  LI+G      ++ A  L+ +    G  P++V Y SL+KG     +   A
Sbjct: 320 GFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHA 379

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL-------------DVY------DG 350
              ++ +  EG  PD+  +N++I+ L KMG+  DA              DV+      DG
Sbjct: 380 LQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDG 439

Query: 351 ----------------LLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---D 391
                           + E  + PD+ T+ S+L+ +C +G+ + + +    + ++    +
Sbjct: 440 YCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPN 499

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
            + YN L+  FC++    +A K+   M  +G  PD  SF  L+ G C    ++ A  ++Q
Sbjct: 500 PITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQ 559

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
            +     +  A     ++         H A ++F   + + +  D  +Y V I G  +  
Sbjct: 560 KLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTA 619

Query: 512 RTEEAYILYSQMKHIAVPPNAYTY 535
             + AY+   +M      P+  T+
Sbjct: 620 NVDRAYMHLVEMIKKGFIPSMSTF 643



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 96/471 (20%), Positives = 192/471 (40%), Gaps = 14/471 (2%)

Query: 97  TGRF-ETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
            GR  E VR + G   R   V    T+   +R   +  M    +     M   G  P+ F
Sbjct: 234 AGRLPEAVRLVDG--MRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF 291

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNL----CKLNDVSNVKDVIGMM 211
             N ++D   KI  V    ++LK+     F+   +  C+L    C   DV    ++    
Sbjct: 292 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 351

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
             KG  P++ ++  L+   C  G I  A Q++  M   G    +  + ++I+G  ++  +
Sbjct: 352 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 411

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
             A  +    +  G  P+V T+ +LI G+ +      A   ++ +   G APD + +N +
Sbjct: 412 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 471

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA- 390
           ++ L K G  ++  + +  ++     P+  T+  L+   C S +     K++  +  E  
Sbjct: 472 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 531

Query: 391 --DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
             D V +N L+  FC+ G    A  L+  + +KG++    +F  L+    G   +  A  
Sbjct: 532 HPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEK 591

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           ++  ++      +++ +  ++D   +     +A       I + +   + ++   I  L 
Sbjct: 592 IFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLT 651

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
              R  +A  +   M  I V P      V  +    ++ I   K L++D++
Sbjct: 652 VNHRVFQAVGIIHIMVKIGVVPEV----VDTILNADKKEIAAPKILVEDLM 698



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 81/378 (21%), Positives = 156/378 (41%), Gaps = 8/378 (2%)

Query: 227 LNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGC 286
           +  + + GR+ +A      M       +  A+  ++D        D A  ++ +M+  G 
Sbjct: 57  IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGV 116

Query: 287 SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALD 346
           SP++ T+T  ++ F       IA   L  L   G     V +  ++  L   G   DA  
Sbjct: 117 SPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQ 172

Query: 347 VYDGLLELKLVPDSYTFCSLLSTVCLSG---RFSLLPKLVCGLEVEADLVVYNALLSYFC 403
           ++D +L   + P+   F  +L  +C  G      LL   V    +  +L  YN  +   C
Sbjct: 173 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLC 232

Query: 404 KAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAH 463
           +AG   +AV+L + M      PD  ++  L+RGLC      EA++  + ++      +  
Sbjct: 233 EAGRLPEAVRLVDGMRAYA-VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF 291

Query: 464 VHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM 523
            +  I+D   +     +A +L + A+ + +  D V+Y   I GL   G  E A  L+++ 
Sbjct: 292 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 351

Query: 524 KHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSS 583
           +   + P+   Y  ++   C +  I    +++ ++ +     D  T   +   + K  + 
Sbjct: 352 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 411

Query: 584 SSAVNQLVEMCNLGLIPD 601
           S A   + +    G +PD
Sbjct: 412 SDATVVMNDAIMKGYLPD 429



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/282 (22%), Positives = 129/282 (45%), Gaps = 5/282 (1%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D+Q+++ +I+ + ++ G       ++ +    G +    TF   +  Y +       L+ 
Sbjct: 394 DIQTYNIVINGLCKM-GNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQL 452

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
            + M  +G  P+T   N V++ L K G+V+   +  +E  L    PN +++NI + N C+
Sbjct: 453 VERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCR 512

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            N +     VI  M ++G +P+   F  L+  FC+ G +  AY L   +   G S + + 
Sbjct: 513 SNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADT 572

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  LI  F     + MA  ++++M+  G   +  TY  LI G  +      A+  L  + 
Sbjct: 573 FNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMI 632

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
            +G  P +     +I+ L+       A+ +   ++++ +VP+
Sbjct: 633 KKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPE 674



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/267 (23%), Positives = 116/267 (43%), Gaps = 2/267 (0%)

Query: 293 YTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
           Y + I+ +  A     A    + ++     P    +N ++D L     +D A  VY  +L
Sbjct: 53  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 112

Query: 353 ELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAV 412
              + PD +T    L + CL+ R  +  +L+  L      V Y  ++      G  + A 
Sbjct: 113 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG-AVAYCTVVCGLYAHGHTHDAR 171

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
           +L++ ML     P+  +F  +L  LC    + EA  +   ++    ++N   +   +  L
Sbjct: 172 QLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGL 231

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
            EAGR  +A++L         P DVV+Y   IRGL +    +EA     +M +    P+ 
Sbjct: 232 CEAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDD 290

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVI 559
           +TY  ++  +CK   ++    LL+D +
Sbjct: 291 FTYNTIIDGYCKISMVQEATELLKDAV 317



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 54/255 (21%), Positives = 103/255 (40%), Gaps = 7/255 (2%)

Query: 77  RDYFHDVQSFDHMIS-VVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
           + Y  DV +F+ +I     RL  + ++   +V  +   G      T+   L    +    
Sbjct: 424 KGYLPDVFTFNTLIDGYCKRL--KLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKV 481

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIA 191
             V E F EM   G  PN    NI+++   +  +++   KV+    +E   P+ +SFN  
Sbjct: 482 NEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTL 541

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           +   C+  D+     +   +  KG+      F  L+  F     +  A ++   M++ G 
Sbjct: 542 IYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGH 601

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
                 + VLIDG  +   +D A     +M++ G  P++ T+  +I           A  
Sbjct: 602 RADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVG 661

Query: 312 FLDMLESEGHAPDLV 326
            + ++   G  P++V
Sbjct: 662 IIHIMVKIGVVPEVV 676



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 63/276 (22%), Positives = 109/276 (39%), Gaps = 47/276 (17%)

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
           +Y A +  + +AG    AV  +  M      P   ++  ++  L  A   D+A  VY  +
Sbjct: 52  LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM 111

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
           +    + + H HT  +       R H A++L  RA+  +     V+Y   + GL   G T
Sbjct: 112 LAAGVSPDLHTHTIRLRSFCLTARPHIALRLL-RALPHR---GAVAYCTVVCGLYAHGHT 167

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD---YHTS 570
            +A  L+ QM H  V PN   +  +L + CK  ++     LL  VI   + ++   Y+  
Sbjct: 168 HDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIW 227

Query: 571 IR-------------------------------LTKFIFKFHSSSSAVNQLVEMCNLGLI 599
           IR                               L + + K      A++ L  M N G +
Sbjct: 228 IRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL 287

Query: 600 PDEM--------WRKLGLLSDET-MTPVSLFDGFVP 626
           PD+         + K+ ++ + T +   ++F GFVP
Sbjct: 288 PDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVP 323



 Score = 42.0 bits (97), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 25/100 (25%), Positives = 46/100 (46%)

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
           +PA    ++ A +     AGR   A+  F R  +   P    +Y   +  L++    ++A
Sbjct: 45  SPATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQA 104

Query: 517 YILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
           + +Y +M    V P+ +T+ + L SFC      +  RLL+
Sbjct: 105 HKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLR 144


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 114/467 (24%), Positives = 207/467 (44%), Gaps = 26/467 (5%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET 180
           +F + ++ +         L  F ++ + GF P     N ++  L    RV   + +  + 
Sbjct: 17  SFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM 76

Query: 181 QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAY 240
             PN ++F   +  LC+   V     ++  MV  G  PN   +  +++  CKMG    A 
Sbjct: 77  CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSAL 136

Query: 241 QLLGLMITLG-TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG 299
            LL  M  L      V  ++ +IDG  +  R   A  L+ +M   G  P++VTY+ +I G
Sbjct: 137 NLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMING 196

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
           F  +  +S A   L  +     +PD+V  + LI+ L K G  + A D+   ++   + P+
Sbjct: 197 FCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPN 256

Query: 360 SYTFCSLLSTVCLSGR-------FSLLPKLVCGLE-------VEADLVVYNALLSYFCKA 405
             T  +LL  +C SG+       F  + K +  ++       VE D+  YN L+S     
Sbjct: 257 VVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINE 316

Query: 406 GFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVH 465
           G   +A +LY  M  +G  PD  ++  ++ GLC   ++DEA  ++  +   + + N    
Sbjct: 317 GKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTF 376

Query: 466 TAIVDRLIEAGRCHKAIQLF----RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYS 521
             ++    +AG     ++LF    RR IV     + ++Y   IRG  + G    +  ++ 
Sbjct: 377 NTLITGYCKAGMVDDGLELFCEMGRRGIVA----NAITYITLIRGFRKVGNINGSLDIFQ 432

Query: 522 QMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
           +M    V P+  T R ML     +  +K    +L+++   ++ +D+H
Sbjct: 433 EMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEEL---QMSMDHH 476



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 105/469 (22%), Positives = 191/469 (40%), Gaps = 109/469 (23%)

Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
           ++  F IL+ CFC   ++  A    G +  LG   ++  +  L+ G     R+  A  L+
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 279 EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
            +M    C PNVVT+T+L+ G         A + LD +  +G  P+ + +  ++D + KM
Sbjct: 74  HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNAL 398
           G    AL++   + EL                                 ++ D+V+Y+A+
Sbjct: 130 GDTVSALNLLRKMEELS-------------------------------HIKPDVVIYSAI 158

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ------- 451
           +    K G    A  L+  M DKG  PD  ++  ++ G C + K  EA  + Q       
Sbjct: 159 IDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKI 218

Query: 452 --GIVMNNPAVNAHVH--------------------------TAIVDRLIEAGRCHKAIQ 483
              +V  +  +NA V                             ++D L ++G+   A++
Sbjct: 219 SPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALE 278

Query: 484 LFR---RAIVE--------KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
           +F+   +++++            DV +Y + I GL+  G+  EA  LY +M H  + P+ 
Sbjct: 279 MFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 338

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVE 592
            TY  M+   CK+  +    ++           D   S   +  I  F++       +  
Sbjct: 339 VTYSSMINGLCKQSRLDEATQM----------FDSMGSKSFSPNIVTFNT------LITG 382

Query: 593 MCNLGLIPD------EMWRKLGLLSDETMTPVSLFDGFVPCERRAGNAN 635
            C  G++ D      EM R+ G++++  +T ++L  GF    R+ GN N
Sbjct: 383 YCKAGMVDDGLELFCEMGRR-GIVAN-AITYITLIRGF----RKVGNIN 425



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 108/249 (43%), Gaps = 32/249 (12%)

Query: 385 GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
           GL++  D+  +N L+  FC       A+  +  +   GF P   +F  LL GLC   ++ 
Sbjct: 8   GLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVS 67

Query: 445 EAINVY--------------------QGIVMNNPAV-----------NAHVHTAIVDRLI 473
           EA++++                    +G V+   A+           N   +  IVD + 
Sbjct: 68  EALDLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMC 127

Query: 474 EAGRCHKAIQLFRR-AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
           + G    A+ L R+   +     DVV Y+  I GL + GR  +A  L+ +M+   + P+ 
Sbjct: 128 KMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDI 187

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVE 592
            TY  M+  FC        +RLLQ+++  +I  D  T   L   + K    +SA + L E
Sbjct: 188 VTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQE 247

Query: 593 MCNLGLIPD 601
           M + G+ P+
Sbjct: 248 MISSGVCPN 256


>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
 gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
          Length = 475

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/418 (22%), Positives = 193/418 (46%), Gaps = 40/418 (9%)

Query: 160 VMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR-- 213
           V+  L K GRVD  + +L    K    P+  + ++ +  LCK + +   ++ +  M R  
Sbjct: 55  VIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTI 114

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL-SVNAWTVLIDGFRRLRRLD 272
                +   +  LLN  CK  ++ +A+ +   M++  + +  V ++++LIDGF ++  L 
Sbjct: 115 STRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELG 174

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A  L+++M+   C PNV TY + + G M     + A    + + S G +PD++ ++ LI
Sbjct: 175 RAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLI 234

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADL 392
              S    +D A ++++ ++     P++                                
Sbjct: 235 HGFSLARKHDQAHELFEAMISRGCRPNA-------------------------------- 262

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           V YN LL   CK   P++A +L+  M+++G  PD  ++  LL G C   KI++A+ V+  
Sbjct: 263 VTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDE 322

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           +V      +   +  ++     AG+  +A QLF+  +  +   D VS+ + I GL +  R
Sbjct: 323 MVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKR 382

Query: 513 TEEAYILYSQMKHI-AVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
            ++A  ++ +M+      P+  TY  ++   C E+ +    ++ +++   ++  D H 
Sbjct: 383 LDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHA 440



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/399 (24%), Positives = 182/399 (45%), Gaps = 13/399 (3%)

Query: 91  SVVTRL--TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRF 148
           SV+  L   GR ++   ++  + + G      T  + +    + +      E    M R 
Sbjct: 54  SVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRT 113

Query: 149 GFT--PNTFARNIVMDVLFKIGRVDLGIKVL-----KETQLPNFLSFNIALCNLCKLNDV 201
             T   + F+ N +++ L K  +V     +      + + +P+ +S++I +   CK++++
Sbjct: 114 ISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDEL 173

Query: 202 SNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVL 261
              + +   M+     PNV  +   LN   + GRIA+A  +   MI+ G S  V  ++ L
Sbjct: 174 GRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTL 233

Query: 262 IDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH 321
           I GF   R+ D A  L+E M+  GC PN VTY  L+ G  +      A      +   G 
Sbjct: 234 IHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGC 293

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR---FSL 378
            PD V +  L+     +G  + A++V+D ++     PD   +  LL     +G+      
Sbjct: 294 DPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQ 353

Query: 379 LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM-LDKGFTPDNYSFVGLLRGL 437
           L +++   E + D V +N ++    KA   + AV+++  M  D G +PD  ++  L+ GL
Sbjct: 354 LFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGL 413

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
           CG +++ EA+ V++ I     + + H    +++ +  AG
Sbjct: 414 CGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAG 452



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 83/349 (23%), Positives = 144/349 (41%), Gaps = 34/349 (9%)

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVV---TYTSLIKGFMEAKMFSIAFSFL 313
           AWT  + G  +  +++ A      M ++  S       T  S+I+   +A     A S L
Sbjct: 13  AWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSLL 72

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           + +   G+ PD+  H++LI+ L K     +A +   G+        + T  S  ++ C S
Sbjct: 73  ETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGM--------NRTI-STRASSCFS 123

Query: 374 GRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTML-DKGFTPDNYSFVG 432
                                YN+LL+  CKA   +QA  +++TM+ ++   PD  S+  
Sbjct: 124 ---------------------YNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSI 162

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           L+ G C   ++  A  +Y+ ++  N   N   + A ++ L+  GR   A  ++   I   
Sbjct: 163 LIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAG 222

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVK 552
              DV++Y+  I G     + ++A+ L+  M      PNA TY  +L   CKE       
Sbjct: 223 CSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAH 282

Query: 553 RLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            L + +++   + D  T   L            AV    EM + G  PD
Sbjct: 283 ELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPD 331


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 119/484 (24%), Positives = 210/484 (43%), Gaps = 39/484 (8%)

Query: 98  GRFETVRGIVGEL-ARVG-CVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           GR +    ++ E+ AR G C+    T+ + +    R        +  D M R     + F
Sbjct: 245 GRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRM-RMSKKASAF 303

Query: 156 ARNIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
             N ++   F  G V+    L +++  E  +P  +++N  +  + +  +V   +     M
Sbjct: 304 TFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEM 363

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
              G  P++  +  L+N +CK G + EA  L G +   G + SV  + +L+DG+ RL  L
Sbjct: 364 RAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDL 423

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           + A    ++MV+ GC P+V TYT L+ G  + +  ++   F D + S+G  PD   +N  
Sbjct: 424 EEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTR 483

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEAD 391
           I     +GS  +A                                  L +++    + +D
Sbjct: 484 ISAELILGSTSEAFQ--------------------------------LTEVMISRGISSD 511

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
            V YN  L   CK+G    A  L+  M+  G  PD  ++  L+   C   ++ EA +++ 
Sbjct: 512 TVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFD 571

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
           G++++    +A  +T  +      G  + A   F++ + E    + V+Y V I  L   G
Sbjct: 572 GMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMG 631

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSI 571
           RT  AY  + +M    + PN YTY +++   CKE N +   RL  ++    I  D+ T  
Sbjct: 632 RTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHN 691

Query: 572 RLTK 575
            L K
Sbjct: 692 ALFK 695



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/374 (23%), Positives = 170/374 (45%), Gaps = 7/374 (1%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLN 199
           EM   G  P     N ++  +F+ G V+       E +    LP+ +++N  +   CK  
Sbjct: 327 EMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAG 386

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
           ++     + G + R G  P+V  + ILL+ +C++G + EA +    M+  G    V+ +T
Sbjct: 387 NLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYT 446

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
           +L++G R++R L M    +++M+  G  P+   Y + I   +     S AF   +++ S 
Sbjct: 447 ILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISR 506

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
           G + D V +N+ +D L K G+  DA  ++  ++   L PD  T+  L+   C  GR    
Sbjct: 507 GISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREA 566

Query: 380 PKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
             +  G+ V       V Y   +  +C+ G    A   +  ML++G  P+  ++  L+  
Sbjct: 567 RDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHA 626

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
           LC   + + A   +  ++    + N + +T ++D   + G   +AI+L+          D
Sbjct: 627 LCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPD 686

Query: 497 VVSYTVAIRGLLEG 510
             ++    +G  EG
Sbjct: 687 HCTHNALFKGFDEG 700



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 106/469 (22%), Positives = 207/469 (44%), Gaps = 10/469 (2%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ------LPNFLSFNIALCNL 195
           + EM + G  P+    N ++D  F+ GRVD   K+L+E +      LP+ +++N+ +  L
Sbjct: 219 YAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGL 278

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
            +  ++     ++  M R     +   F  L+  +   G + +A  L   M   G   +V
Sbjct: 279 ARKGELEKAAQLVDRM-RMSKKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTV 337

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
             +  +I G  R   ++ A   + +M   G  P+++TY SLI G+ +A     A      
Sbjct: 338 VTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGD 397

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
           L+  G AP ++ +N+L+D   ++G  ++A      ++E    PD  T+  L++       
Sbjct: 398 LKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRN 457

Query: 376 FSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
            +++ +    +    ++ D   YN  +S     G  ++A +L   M+ +G + D  ++  
Sbjct: 458 LAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNI 517

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
            L GLC +  + +A  ++  +V +    +   +T ++    E GR  +A  +F   +V  
Sbjct: 518 FLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSG 577

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVK 552
            P   V+YTV I      G    AY  + +M    V PN  TY V++ + C+     +  
Sbjct: 578 LPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAY 637

Query: 553 RLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           +   ++++  +  + +T   L     K  +   A+    EM   G+ PD
Sbjct: 638 QHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPD 686



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 64/122 (52%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+ +++ + +   C+  ++ +       M+ +G  PN   + +L++  C+MGR   AYQ 
Sbjct: 580 PSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQH 639

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
              M+  G S +   +T+LIDG  +    + A  L+ +M Q+G  P+  T+ +L KGF E
Sbjct: 640 FHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGFDE 699

Query: 303 AK 304
            +
Sbjct: 700 GQ 701


>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
 gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
 gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 687

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 125/569 (21%), Positives = 231/569 (40%), Gaps = 50/569 (8%)

Query: 44  FPIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETV 103
           FP  L+P  V   L +  +   A + F    +   Y H    + H++  ++  T     V
Sbjct: 4   FPKSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSE-TRMVNHV 62

Query: 104 RGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGR-FGFTPNTFARNIVMD 162
             IV  +    C       L  ++ Y +  M    L+ F  M   FG  P   + N +++
Sbjct: 63  SRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLN 122

Query: 163 VLFKIGRVDLGIKVLK-----ETQ--LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG 215
              +  +    +KV       ET    PN  ++N+ +   CK  +    +  +  M ++G
Sbjct: 123 AFVEAKQ---WVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEG 179

Query: 216 FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAG 275
           F P+V  +  ++N   K G++ +A +L   M   G +  V  + +LIDGF + +    A 
Sbjct: 180 FKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAM 239

Query: 276 YLWEKMVQNGC-SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
            LW++++++    PNV T+  +I G  +           + ++      DL  ++ LI  
Sbjct: 240 ELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHG 299

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF------------------ 376
           L   G+ D A  V++ L E K   D  T+ ++L   C  G+                   
Sbjct: 300 LCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNI 359

Query: 377 -------------------SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
                              +++ +L+      AD   Y   +   C  G+ N+A+ +   
Sbjct: 360 VSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQE 419

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           +   G   D Y++  ++  LC  ++++EA N+ + +  +   +N+HV  A++  LI   R
Sbjct: 420 VESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSR 479

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
             +A    R          VVSY + I GL + G+  EA     +M      P+  TY +
Sbjct: 480 LGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSI 539

Query: 538 MLLSFCKERNIKMVKRLLQDVIDARIELD 566
           +L   C++R I +   L    + + +E D
Sbjct: 540 LLCGLCRDRKIDLALELWHQFLQSGLETD 568



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 104/501 (20%), Positives = 215/501 (42%), Gaps = 11/501 (2%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
           A  F  W  K+  +  DV S+  +I+ + +  G+ +    +  E++  G       + + 
Sbjct: 168 ARGFLDWMWKE-GFKPDVFSYSTVINDLAK-AGKLDDALELFDEMSERGVAPDVTCYNIL 225

Query: 126 LRIYWRGEMYGMVLEAFDEM-GRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-- 182
           +  + + + +   +E +D +       PN    NI++  L K GRVD  +K+ +  +   
Sbjct: 226 IDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNE 285

Query: 183 --PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAY 240
              +  +++  +  LC   +V   + V   +  +    +V  +  +L  FC+ G+I E+ 
Sbjct: 286 REKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESL 345

Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
           +L  +M     S+++ ++ +LI G     ++D A  +W  M   G + +  TY   I G 
Sbjct: 346 ELWRIM-EHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGL 404

Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
                 + A   +  +ES G   D+  +  +IDCL K    ++A ++   + +  +  +S
Sbjct: 405 CVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNS 464

Query: 361 YTFCSLLSTVCLSGRF---SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
           +   +L+  +    R    S   + +        +V YN L+   CKAG   +A      
Sbjct: 465 HVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKE 524

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           ML+ G+ PD  ++  LL GLC  RKID A+ ++   + +    +  +H  ++  L   G+
Sbjct: 525 MLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGK 584

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
              A+ +           ++V+Y   + G  + G +  A +++  M  + + P+  +Y  
Sbjct: 585 LDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNT 644

Query: 538 MLLSFCKERNIKMVKRLLQDV 558
           ++   C  R +        D 
Sbjct: 645 IMKGLCMCRGVSYAMEFFDDA 665



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 93/390 (23%), Positives = 181/390 (46%), Gaps = 5/390 (1%)

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           G  P +R +  LLN F +  +  +   L     T G + ++  + VLI    + +  + A
Sbjct: 109 GCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKA 168

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
               + M + G  P+V +Y+++I    +A     A    D +   G APD+  +N+LID 
Sbjct: 169 RGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDG 228

Query: 335 LSKMGSYDDALDVYDGLLELKLV-PDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEA 390
             K   +  A++++D LLE   V P+  T   ++S +   GR     K+   +   E E 
Sbjct: 229 FLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREK 288

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           DL  Y++L+   C AG  ++A  ++N + ++  + D  ++  +L G C   KI E++ ++
Sbjct: 289 DLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW 348

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
           + I+ +  +VN   +  ++  L+E G+  +A  ++R    + Y  D  +Y + I GL   
Sbjct: 349 R-IMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVN 407

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
           G   +A  +  +++      + Y Y  ++   CK++ ++    L++++    +EL+ H  
Sbjct: 408 GYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVC 467

Query: 571 IRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
             L   + +      A   L EM   G  P
Sbjct: 468 NALIGGLIRDSRLGEASFFLREMGKNGCRP 497



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 90/380 (23%), Positives = 174/380 (45%), Gaps = 8/380 (2%)

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
            G   ++ ++  L++ F   ++      L+      G +PN+ TY  LIK   + K F  
Sbjct: 108 FGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEK 167

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL-- 366
           A  FLD +  EG  PD+  ++ +I+ L+K G  DDAL+++D + E  + PD   +  L  
Sbjct: 168 ARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILID 227

Query: 367 --LSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
             L          L  +L+    V  ++  +N ++S   K G  +  +K++  M      
Sbjct: 228 GFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNERE 287

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
            D Y++  L+ GLC A  +D+A +V+  +     +++   +  ++      G+  ++++L
Sbjct: 288 KDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLEL 347

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
           +R  +  K  +++VSY + I+GLLE G+ +EA +++  M       +  TY + +   C 
Sbjct: 348 WR-IMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCV 406

Query: 545 ERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGL-IPDEM 603
              +     ++Q+V  +   LD +    +   + K      A N + EM   G+ +   +
Sbjct: 407 NGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHV 466

Query: 604 WRKL--GLLSDETMTPVSLF 621
              L  GL+ D  +   S F
Sbjct: 467 CNALIGGLIRDSRLGEASFF 486



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 95/437 (21%), Positives = 175/437 (40%), Gaps = 47/437 (10%)

Query: 44  FPIILAPHIVHSTLLNCPSDLIALSFFIWC-AKQRDYFHDVQSFDHMISVVTRLTGRFET 102
           +P +   +I+ S L  C    +     IW   KQ +   D+ ++  +I  +    G  + 
Sbjct: 252 YPNVKTHNIMISGLSKCGR--VDDCLKIWERMKQNEREKDLYTYSSLIHGLCD-AGNVDK 308

Query: 103 VRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMD 162
              +  EL      I   T+   L  + R       LE +  M     + N  + NI++ 
Sbjct: 309 AESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIM-EHKNSVNIVSYNILIK 367

Query: 163 VLFKIGRVDLGIKVLKETQLPNF----LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYP 218
            L + G++D    + +      +     ++ I +  LC    V+    V+  +   G + 
Sbjct: 368 GLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHL 427

Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
           +V  +  +++C CK  R+ EA  L+  M   G  L+ +    LI G  R  RL  A +  
Sbjct: 428 DVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFL 487

Query: 279 EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL------------- 325
            +M +NGC P VV+Y  LI G  +A  F  A +F+  +   G  PDL             
Sbjct: 488 REMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRD 547

Query: 326 ----------------------VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
                                 + HN+LI  L  +G  DDA+ V   +       +  T+
Sbjct: 548 RKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTY 607

Query: 364 CSLLS---TVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
            +L+     V  S R +++   +  + ++ D++ YN ++   C     + A++ ++   +
Sbjct: 608 NTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARN 667

Query: 421 KGFTPDNYSFVGLLRGL 437
            G  P  Y++  L+R +
Sbjct: 668 HGIFPTVYTWNILVRAV 684


>gi|125539409|gb|EAY85804.1| hypothetical protein OsI_07165 [Oryza sativa Indica Group]
          Length = 649

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 108/428 (25%), Positives = 196/428 (45%), Gaps = 11/428 (2%)

Query: 112 RVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD 171
           R  C     TF   +R + +  +    ++  D+M R+G TP+    + +++   + G VD
Sbjct: 218 RNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVD 277

Query: 172 LGIKVLKETQL--PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
             + +L  T L  PN + +N AL  LC      ++ +++  MVRKG  PN   F +L++ 
Sbjct: 278 QALDLLN-TMLCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISS 336

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
            C+   +  A ++L  M   G       + ++I+      R+D A  L   MV   C P+
Sbjct: 337 LCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPD 393

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFL-DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVY 348
            + + +++KGF  A+ +  A   +  M   +    ++ F N+LID L + G  + A  V+
Sbjct: 394 ALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTF-NILIDTLCQNGLVNYATQVF 452

Query: 349 DGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFP 408
           + +   +  PD  T+ SLL+     G   +  +L   +  + D+  YNA+L   C+A   
Sbjct: 453 EQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCKPDIFSYNAVLKGLCRAARW 512

Query: 409 NQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAI 468
             A +L   M+ K   P+  +F  L+  LC    +D AI V + +       +   + A+
Sbjct: 513 EDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNAL 572

Query: 469 VDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAV 528
           ++   E GR   A++L      +    D +SY   ++GL    R ++A  L ++M     
Sbjct: 573 INGFSEQGRLDDALKLLSTMSCKP---DAISYNSTLKGLCRAERWQDAEELVAEMLRNKC 629

Query: 529 PPNAYTYR 536
            PN  T++
Sbjct: 630 TPNEVTFK 637



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 112/468 (23%), Positives = 202/468 (43%), Gaps = 59/468 (12%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR      ++G  AR        T+   +  Y R    G + +A   +      P+T+  
Sbjct: 138 GRLADAERVLGA-ARATGAANVVTYTALIDGYCRS---GRLDDALRLIASMPVAPDTYTY 193

Query: 158 NIVMDVLFKIGR----VDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N V+  L    +     +L  ++++    PN ++F   + + C+   +     ++  M R
Sbjct: 194 NTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPR 253

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G  P+V ++  L+N F + G + +A  LL  M+    ++  NA    + G     R + 
Sbjct: 254 YGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCKPNTVCYNA---ALKGLCIAERWED 310

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
            G L  +MV+ GCSPN  T++ LI    +  +   A   L+ +E  G  PD V +N++I+
Sbjct: 311 IGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIIN 370

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL-EVEADL 392
            LS+ G  DDAL + + ++     PD+  F ++L   C + R+    +L+  +   +  L
Sbjct: 371 SLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPL 427

Query: 393 V--VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           +   +N L+   C+ G  N A +++  M     TPD  ++  LL G              
Sbjct: 428 IEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFS------------ 475

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
                                  E G    AIQLFR    +    D+ SY   ++GL   
Sbjct: 476 -----------------------EQGLVEVAIQLFRSMPCKP---DIFSYNAVLKGLCRA 509

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK----ERNIKMVKRL 554
            R E+A  L ++M     PPN  T+ +++ S C+    +R I++++++
Sbjct: 510 ARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQM 557



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 103/454 (22%), Positives = 199/454 (43%), Gaps = 51/454 (11%)

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGL 245
           +S N  +   C+   +++ + V+G   R     NV  +  L++ +C+ GR+ +A +L+  
Sbjct: 125 VSHNTLVAGYCRDGRLADAERVLGA-ARATGAANVVTYTALIDGYCRSGRLDDALRLIAS 183

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           M     + + N    ++ G    ++ + A  L  +M++N C PN VT+ + I+ F +  +
Sbjct: 184 MPVAPDTYTYN---TVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGL 240

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
              A   LD +   G  PD+V ++ LI+  S+ G  D ALD+ + +L     P++  + +
Sbjct: 241 LDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYNA 297

Query: 366 LLSTVCLSGR----------------------FSLLPKLVC-------GLEV-------- 388
            L  +C++ R                      FS+L   +C        +EV        
Sbjct: 298 ALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYG 357

Query: 389 -EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
            E D V YN +++   + G  + A++L N+M+ K   PD   F  +L+G C A +  +A 
Sbjct: 358 CEPDTVNYNIIINSLSERGRVDDALRLLNSMVCK---PDALGFNAVLKGFCRAERWHDAS 414

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            +   +  ++  +       ++D L + G  + A Q+F +    +   D+V+Y+  + G 
Sbjct: 415 ELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGF 474

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
            E G  E A  L+  M      P+ ++Y  +L   C+    +    L+ +++      + 
Sbjct: 475 SEQGLVEVAIQLFRSMP---CKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNE 531

Query: 568 HTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            T   L   + +      A+  L +M N G  PD
Sbjct: 532 VTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPD 565


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 114/467 (24%), Positives = 207/467 (44%), Gaps = 26/467 (5%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET 180
           +F + ++ +         L  F ++ + GF P     N ++  L    RV   + +  + 
Sbjct: 17  SFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM 76

Query: 181 QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAY 240
             PN ++F   +  LC+   V     ++  MV  G  PN   +  +++  CKMG    A 
Sbjct: 77  CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSAL 136

Query: 241 QLLGLMITLG-TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG 299
            LL  M  L      V  ++ +IDG  +  R   A  L+ +M   G  P++VTY+ +I G
Sbjct: 137 NLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMING 196

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
           F  +  +S A   L  +     +PD+V  + LI+ L K G  + A D+   ++   + P+
Sbjct: 197 FCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPN 256

Query: 360 SYTFCSLLSTVCLSGR-------FSLLPKLVCGLE-------VEADLVVYNALLSYFCKA 405
             T  +LL  +C SG+       F  + K +  ++       VE D+  YN L+S     
Sbjct: 257 VVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINE 316

Query: 406 GFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVH 465
           G   +A +LY  M  +G  PD  ++  ++ GLC   ++DEA  ++  +   + + N    
Sbjct: 317 GKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTF 376

Query: 466 TAIVDRLIEAGRCHKAIQLF----RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYS 521
             ++    +AG     ++LF    RR IV     + ++Y   IRG  + G    +  ++ 
Sbjct: 377 NTLITGYCKAGMVDDGLELFCEMGRRGIVA----NAITYITLIRGFRKVGNINGSLDIFQ 432

Query: 522 QMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
           +M    V P+  T R ML     +  +K    +L+++   ++ +D+H
Sbjct: 433 EMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEEL---QMSMDHH 476



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 105/469 (22%), Positives = 191/469 (40%), Gaps = 109/469 (23%)

Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
           ++  F IL+ CFC   ++  A    G +  LG   ++  +  L+ G     R+  A  L+
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 279 EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
            +M    C PNVVT+T+L+ G         A + LD +  +G  P+ + +  ++D + KM
Sbjct: 74  HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNAL 398
           G    AL++   + EL                                 ++ D+V+Y+A+
Sbjct: 130 GDTVSALNLLRKMEELS-------------------------------HIKPDVVIYSAI 158

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ------- 451
           +    K G    A  L+  M DKG  PD  ++  ++ G C + K  EA  + Q       
Sbjct: 159 IDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKI 218

Query: 452 --GIVMNNPAVNAHVH--------------------------TAIVDRLIEAGRCHKAIQ 483
              +V  +  +NA V                             ++D L ++G+   A++
Sbjct: 219 SPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALE 278

Query: 484 LFR---RAIVE--------KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
           +F+   +++++            DV +Y + I GL+  G+  EA  LY +M H  + P+ 
Sbjct: 279 MFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 338

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVE 592
            TY  M+   CK+  +    ++           D   S   +  I  F++       +  
Sbjct: 339 VTYSSMINGLCKQSRLDEATQM----------FDSMGSKSFSPNIVTFNT------LITG 382

Query: 593 MCNLGLIPD------EMWRKLGLLSDETMTPVSLFDGFVPCERRAGNAN 635
            C  G++ D      EM R+ G++++  +T ++L  GF    R+ GN N
Sbjct: 383 YCKAGMVDDGLELFCEMGRR-GIVAN-AITYITLIRGF----RKVGNIN 425



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 108/249 (43%), Gaps = 32/249 (12%)

Query: 385 GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
           GL++  D+  +N L+  FC       A+  +  +   GF P   +F  LL GLC   ++ 
Sbjct: 8   GLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVS 67

Query: 445 EAINVY--------------------QGIVMNNPAV-----------NAHVHTAIVDRLI 473
           EA++++                    +G V+   A+           N   +  IVD + 
Sbjct: 68  EALDLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMC 127

Query: 474 EAGRCHKAIQLFRR-AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
           + G    A+ L R+   +     DVV Y+  I GL + GR  +A  L+ +M+   + P+ 
Sbjct: 128 KMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDI 187

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVE 592
            TY  M+  FC        +RLLQ+++  +I  D  T   L   + K    +SA + L E
Sbjct: 188 VTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQE 247

Query: 593 MCNLGLIPD 601
           M + G+ P+
Sbjct: 248 MISSGVCPN 256


>gi|115445449|ref|NP_001046504.1| Os02g0266200 [Oryza sativa Japonica Group]
 gi|50251963|dbj|BAD27898.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536035|dbj|BAF08418.1| Os02g0266200 [Oryza sativa Japonica Group]
 gi|125581581|gb|EAZ22512.1| hypothetical protein OsJ_06176 [Oryza sativa Japonica Group]
 gi|215704610|dbj|BAG94238.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215737116|dbj|BAG96045.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 632

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 124/508 (24%), Positives = 224/508 (44%), Gaps = 38/508 (7%)

Query: 65  IALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVG-CVIKAQTFL 123
           + + FF W AK+R+Y HD  ++  +I  +  L  ++  +  ++ E+ R   CV+      
Sbjct: 105 VKMQFFRWAAKKRNYQHDTSTYMALIHCL-ELVEQYGEMWKMIQEMVRSPICVVTPMELS 163

Query: 124 LFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP 183
             +R+    +M G  +  F ++      P   A N ++ +L   G+ +      K  +L 
Sbjct: 164 QVIRMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYE------KVHELY 217

Query: 184 NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
           N +S N   C                       +P+   +  L++ FCK+GR   A +LL
Sbjct: 218 NEMS-NEGHC-----------------------HPDTVTYSALISAFCKLGRQDSAIRLL 253

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
             M   G   +   +T++I  F +L  +  A  L+E+M    C P+V TYT LI+G  +A
Sbjct: 254 NEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKA 313

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
                A+ F   ++ E   PD V  N +I+ L K G  DD L +++ +     +P+  T+
Sbjct: 314 GRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTY 373

Query: 364 CSLL-----STVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
            +++     S   +S  FS   ++  G  +      Y+ L+  FCK     +A+ L   M
Sbjct: 374 NTIIKALFESKSRVSEVFSWFERMK-GSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEM 432

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
            +KGF P   ++  L+  L  A++ D A  ++Q +  N  + +A V+  ++  L +AGR 
Sbjct: 433 DEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRL 492

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
             AI LF          +V +Y   + GL      +EA     +M+     P+  +Y ++
Sbjct: 493 DDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNII 552

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELD 566
           L    K         +L ++ ++ I+ D
Sbjct: 553 LNGLAKTGGPHRAMEMLTNMKNSTIKPD 580



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/308 (21%), Positives = 136/308 (44%), Gaps = 19/308 (6%)

Query: 79  YFHDVQSFD---------HMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLR-I 128
           ++H++Q  D         +MI+ + +  GR +    +  E+    C+    T+   ++ +
Sbjct: 322 FYHEMQREDCKPDTVVMNNMINFLGK-AGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKAL 380

Query: 129 YWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSF 188
           +        V   F+ M   G +P+ F  +I++D   K  R++  + +L+E     F   
Sbjct: 381 FESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPC 440

Query: 189 NIALCNLCKLNDVSNVK------DVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
             A C+L  ++ +   K      ++   +       + R++ +++    K GR+ +A  L
Sbjct: 441 PAAYCSL--IDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINL 498

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
              M  LG + +V A+  L+ G  R   LD A     KM ++GC P++ +Y  ++ G  +
Sbjct: 499 FDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAK 558

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
                 A   L  +++    PD V +N ++  LS  G +++A ++   +  L    D  T
Sbjct: 559 TGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLIT 618

Query: 363 FCSLLSTV 370
           + S+L  +
Sbjct: 619 YSSILEAI 626



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/212 (21%), Positives = 94/212 (44%), Gaps = 7/212 (3%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFL 186
           R E   M+LE  DE G   F P   A   ++D L K  R DL  ++ +E +      +  
Sbjct: 421 RIEKAMMLLEEMDEKG---FPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSAR 477

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
            + + + +L K   + +  ++   M + G  PNV  +  L++   +   + EA   +  M
Sbjct: 478 VYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKM 537

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
              G    +N++ ++++G  +      A  +   M  +   P+ V+Y +++     A MF
Sbjct: 538 QEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMF 597

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
             A   +  + + G   DL+ ++ +++ + K+
Sbjct: 598 EEAAELMKEMNALGFEYDLITYSSILEAIGKV 629


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 116/545 (21%), Positives = 225/545 (41%), Gaps = 54/545 (9%)

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFT--PNTFARNIVMDV 163
           ++  + ++GC+    ++ + L+           LE    M   G    P+  +   V++ 
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208

Query: 164 LFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN 219
            FK G +D       ++L    LPN ++++  +  LCK   +    +V+  MV+ G  PN
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
            R +  +++ +C  G+  EA   L  M + G    V  +  L+D   +  R   A  +++
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
            M + G  P + TY +L++G+            LD++   G  P+    ++LI   +K G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR------------------------ 375
             D A+ V+  + +  L PD+ T+ +++  +C SGR                        
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 376 -------------------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYN 416
                                +L + +C      D + +N+++   CK G   ++ KL++
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGIC-----LDTIFFNSIIDSHCKEGRVIESEKLFD 503

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
            M+  G  PD  ++  L+ G C A K+DEA  +   +V      +   +  +++   +  
Sbjct: 504 LMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKIS 563

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
           R   A+ LFR         D+++Y + ++GL +  RT  A  LY  +          TY 
Sbjct: 564 RMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYN 623

Query: 537 VMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNL 596
           ++L   CK        R+ Q++    ++L+  T   +   + K   +  A +    +   
Sbjct: 624 IILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSAN 683

Query: 597 GLIPD 601
           GL+PD
Sbjct: 684 GLVPD 688



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 120/508 (23%), Positives = 216/508 (42%), Gaps = 48/508 (9%)

Query: 142 FDEMGRFG---FTPNTFARNIVMDVLFKIGRVDLGIKVL--------------------- 177
           ++ M R G    TPN     I++      GR+DLG   L                     
Sbjct: 76  YNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 135

Query: 178 ----------------KETQL---PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG--F 216
                           + TQL   PN  S+NI L  LC  N      +++ MM   G   
Sbjct: 136 LCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDC 195

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
            P+V  +  ++N F K G + +AY     M+  G   +V  ++ +I    + + +D A  
Sbjct: 196 PPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAME 255

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           +   MV+NG  PN  TY S++ G+  +     A  FL  + S+G  PD+V +N L+D L 
Sbjct: 256 VLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLC 315

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG---RFSLLPKLVCGLEVEADLV 393
           K G   +A  ++D + +  L P+  T+ +LL      G       L  L+    +  +  
Sbjct: 316 KNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 375

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
           V++ L+  + K G  +QA+ +++ M  +G  PD  ++  ++  LC + ++++A+  ++ +
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
           +    +    V+ +++  L    +  KA +L    +     LD + +   I    + GR 
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRV 495

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
            E+  L+  M  I V P+  TY  ++  +C    +    +LL  ++   ++ D  T   L
Sbjct: 496 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTL 555

Query: 574 TKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
                K      A+    EM + G+ PD
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPD 583



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 106/436 (24%), Positives = 186/436 (42%), Gaps = 45/436 (10%)

Query: 175 KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG---FYPNVRMFEILLNCFC 231
           ++L+  +  +    N AL ++ + +  + V      M R G     PN+  + IL+   C
Sbjct: 44  ELLRRGRGASIYGLNCALADVARHSPAAAVSRY-NRMARAGADEVTPNLCTYGILIGSCC 102

Query: 232 KMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL-DMAGYLWEKMVQNGCSPNV 290
             GR+   +  LG +I  G  +   A+T L+ G    +R  D    +  +M Q GC PNV
Sbjct: 103 CAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNV 162

Query: 291 VTYTSLIKGFMEAKMFSIAFSFLDMLESEGH--APDLVFHNVLIDCLSKMGSYDDALDVY 348
            +Y  L+KG  +      A   L M+  +G    PD+V +  +I+   K G  D A   Y
Sbjct: 163 FSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTY 222

Query: 349 DGLLELKLVPDSYTFCSLLSTVCLSGRF-------------------------------S 377
             +L+  ++P+  T+ S+++ +C +                                  S
Sbjct: 223 HEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSS 282

Query: 378 LLPKLVCGL-------EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
             PK   G         VE D+V YN+L+ Y CK G   +A K++++M  +G  P+  ++
Sbjct: 283 GQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTY 342

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             LL+G      + E   +   +V N    N +V + ++    + G+  +A+ +F +   
Sbjct: 343 GTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQ 402

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
           +    D V+Y   I  L + GR E+A   + QM    + P    Y  ++ S C       
Sbjct: 403 QGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDK 462

Query: 551 VKRLLQDVIDARIELD 566
            K L+ +++D  I LD
Sbjct: 463 AKELILEMLDRGICLD 478



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 98/426 (23%), Positives = 194/426 (45%), Gaps = 10/426 (2%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G    + G++  + R G       F + +  Y +       +  F +M + G  P+T   
Sbjct: 353 GALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTY 412

Query: 158 NIVMDVLFKIGRVDLGIK----VLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
             V+ +L K GRV+  ++    ++ E   P  + +N  + +LC  +     K++I  M+ 
Sbjct: 413 GTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLD 472

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +G   +   F  +++  CK GR+ E+ +L  LM+ +G    +  ++ LIDG+    ++D 
Sbjct: 473 RGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDE 532

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L   MV  G  P+ VTY +LI G+ +      A      +ES G +PD++ +N+++ 
Sbjct: 533 ATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQ 592

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC---LSGRFSLLPKLVCGLEVEA 390
            L +      A ++Y G+ E     +  T+  +L  +C   L+     + + +C  +++ 
Sbjct: 593 GLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL 652

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           +   +N ++    K G  ++A  L+  +   G  PD  ++  +   L     ++E  +++
Sbjct: 653 ETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLF 712

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA-IQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
             +  N    N+ +  +IV +L++ G   +A   LF   I EK+     S       LL 
Sbjct: 713 LSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLF--MIDEKHFSLEASTASLFLDLLS 770

Query: 510 GGRTEE 515
           GG+ +E
Sbjct: 771 GGKYQE 776



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/252 (20%), Positives = 103/252 (40%), Gaps = 5/252 (1%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           L G+ +    ++  +  VG      T+   +  Y +       L  F EM   G +P+  
Sbjct: 526 LAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDII 585

Query: 156 ARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
             NI++  LF+  R     +L + + +        ++NI L  LCK N       +   +
Sbjct: 586 TYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 645

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
                    R F I++    K+GR  EA  L   +   G    V  ++++ +       L
Sbjct: 646 CLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLL 705

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           +    L+  M +NGC+ N     S+++  ++    + A ++L M++ +  + +    ++ 
Sbjct: 706 EELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLF 765

Query: 332 IDCLSKMGSYDD 343
           +D LS  G Y +
Sbjct: 766 LDLLSG-GKYQE 776


>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 585

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 194/408 (47%), Gaps = 20/408 (4%)

Query: 148 FGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDV 207
           +  T  TF  N  +D       V L  ++L++   P    FN  L +L K      V  +
Sbjct: 54  YSSTSTTFHSNNDVD-----DAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSL 108

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMG----RIAEAYQLLGLMITLGTSLSVNAWTVLID 263
              M  +G  PN+    IL+ CFC++G    +I +A+     ++ LG  L   ++  LI 
Sbjct: 109 SQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIH 168

Query: 264 GFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP 323
           G  ++     A  L +++       N V Y ++I G  + K  + AF     + S+G +P
Sbjct: 169 GLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISP 228

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-------F 376
           ++V ++ LI     +G   DA+D+++ ++   + PD YTF  L+   C   +       F
Sbjct: 229 NVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVF 288

Query: 377 SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
           +++ K      +  D+V YN+L+  +C     N A  ++NTM   G  PD  S+  L+ G
Sbjct: 289 AMMMKQ----GIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILING 344

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
            C  +K+D+A+N++  +   N   N   + +++D L ++GR   A+QL  +      P +
Sbjct: 345 FCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPN 404

Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
           +++Y   I  L +  + ++A  L ++ K   + P+ YTY +++   CK
Sbjct: 405 ILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCK 452



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 114/489 (23%), Positives = 216/489 (44%), Gaps = 53/489 (10%)

Query: 70  FIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARV-GCVIKAQTFLLFLRI 128
           FI  +     FH     D  +S+  RL  +  T      E  ++ G ++K++ +   L +
Sbjct: 51  FISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAF--EFNKILGSLVKSKHYHTVLSL 108

Query: 129 YWRGEMYGM-----------------------VLEAF---DEMGRFGFTPNTFARNIVMD 162
             + E  G+                       + +AF   D++   GF  +  +   ++ 
Sbjct: 109 SQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIH 168

Query: 163 VLFKIGRVDLGIKVL-----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFY 217
            L K+G     + +L     K  QL N + +N  +  +CK   V++  D+   MV KG  
Sbjct: 169 GLCKVGETRAALDLLQRVDGKLVQL-NAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGIS 227

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
           PNV  +  L++ F  +G++ +A  L   +I          + +L+DGF + R++     +
Sbjct: 228 PNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTV 287

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
           +  M++ G  P+VVTY SL+ G+   K  + A S  + +   G  PD+  +N+LI+   K
Sbjct: 288 FAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCK 347

Query: 338 MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVV 394
           +   D A+++++ +    ++P+  T+ SL+  +  SGR S   +LV  +    V  +++ 
Sbjct: 348 IKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILT 407

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           YN+++    K    ++A+ L     D+G  P  Y++  L+ GLC     D  +N Y    
Sbjct: 408 YNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKVEGYDITVNTY---- 463

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
                 N  +H        + G   +A+ L  +        + V+Y + IR LL+    +
Sbjct: 464 ------NVMIHG-----FCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNEND 512

Query: 515 EAYILYSQM 523
           +A  L+ +M
Sbjct: 513 KAEKLFREM 521



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 88/339 (25%), Positives = 165/339 (48%), Gaps = 24/339 (7%)

Query: 128 IYWRGEMYGM-----VLEAFD---EMGRFGFTPNTFARNIVMDVLFKIGR----VDLGIK 175
           + +   +YGM     V +AFD   EM   G +PN    + ++   F +G+    +DL  K
Sbjct: 196 VMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNK 255

Query: 176 VLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGR 235
           ++ E   P+  +FNI +   CK   +   K V  MM+++G  P+V  +  L++ +C +  
Sbjct: 256 IILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKE 315

Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
           +  A  +   M   G +  + ++ +LI+GF +++++D A  L+ +M      PNVVTY S
Sbjct: 316 VNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNS 375

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           LI G  ++   S A   +D +   G  P+++ +N +ID L K    D A+ +     +  
Sbjct: 376 LIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQG 435

Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLY 415
           + P  YT+  L+  +C           V G ++  +   YN ++  FCK G  ++A+ L 
Sbjct: 436 IQPSMYTYTILIDGLC----------KVEGYDITVN--TYNVMIHGFCKKGLFDEALSLL 483

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           + M D    P+  ++   +R L    + D+A  +++ ++
Sbjct: 484 SKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMI 522



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 71/324 (21%), Positives = 148/324 (45%), Gaps = 8/324 (2%)

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           L+  +I L T ++  +++     F     +D A  L+ ++++   +P    +  ++   +
Sbjct: 39  LISFLILL-TKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLV 97

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG----SYDDALDVYDGLLELKLV 357
           ++K +    S    +E  G  P+L   N+LI C  ++G        A   +D L+ L   
Sbjct: 98  KSKHYHTVLSLSQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFH 157

Query: 358 PDSYTFCSLLSTVCLSG--RFSL-LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKL 414
            D  ++ +L+  +C  G  R +L L + V G  V+ + V+YN ++   CK    N A  L
Sbjct: 158 LDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDL 217

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
           Y+ M+ KG +P+  ++  L+ G     K+ +AI+++  I++ N   + +    +VD   +
Sbjct: 218 YSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCK 277

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
             +  +   +F   + +    DVV+Y   + G         A  +++ M    V P+  +
Sbjct: 278 DRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRS 337

Query: 535 YRVMLLSFCKERNIKMVKRLLQDV 558
           Y +++  FCK + +     L  ++
Sbjct: 338 YNILINGFCKIKKVDKAMNLFNEM 361



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/229 (22%), Positives = 101/229 (44%), Gaps = 20/229 (8%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           F+ M + G  P+  + NI+++   KI +VD  + +  E      +PN +++N  +  L K
Sbjct: 323 FNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSK 382

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              +S    ++  M  +G  PN+  +  +++   K  ++ +A  L+      G   S+  
Sbjct: 383 SGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYT 442

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T+LIDG  ++   D+                V TY  +I GF +  +F  A S L  ++
Sbjct: 443 YTILIDGLCKVEGYDIT---------------VNTYNVMIHGFCKKGLFDEALSLLSKMK 487

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF-CS 365
                P+ V + + I  L      D A  ++  ++   L+  S ++ CS
Sbjct: 488 DSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMITRGLLNRSASYPCS 536


>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
 gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
          Length = 696

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/382 (24%), Positives = 183/382 (47%), Gaps = 5/382 (1%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG--FYPNVRMFEILLNCFCKMGRIAEAY 240
           P+  S+   L  LC         ++I MM   G    PNV  +  +++ F K G + +AY
Sbjct: 213 PDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAY 272

Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
            L   M+  G   +V     +IDG  +++ +D A  + ++M+     PN  TY SLI G+
Sbjct: 273 TLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGY 332

Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
           + +  ++ A   L  +  +G  P++V +++LIDCL K G + +A ++++ +++    P++
Sbjct: 333 LSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNA 392

Query: 361 YTFCSLLSTVCLSGRF---SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
            T+ SLL      G     + +  L+    +     V+N  +  +CK G  ++A   +N 
Sbjct: 393 STYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNK 452

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           M  +GF PD  ++  ++ GLC   ++D+A++ +  ++ +  + +      ++      G+
Sbjct: 453 MQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGK 512

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
             KA +LF   +    P +V ++   I  L + G+  EA  L+  M      PN  +Y  
Sbjct: 513 WEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNT 572

Query: 538 MLLSFCKERNIKMVKRLLQDVI 559
           M+  +     +  V +LL D++
Sbjct: 573 MIHGYFIAGEVGEVMKLLDDML 594



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 101/425 (23%), Positives = 195/425 (45%), Gaps = 6/425 (1%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+  +F I +   C    ++     +G +++ G       F  LL   C   R ++A  +
Sbjct: 142 PDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMNI 201

Query: 243 -LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG--CSPNVVTYTSLIKG 299
            L  M  LG +  V ++T L+ G    ++ + A  L   M ++G  C PNVV+YT++I G
Sbjct: 202 VLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHG 261

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
           F +      A++    +   G  P++V  N +ID L K+ + D A  V   +++  ++P+
Sbjct: 262 FFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPN 321

Query: 360 SYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYN 416
             T+ SL+     SG+++   +++  +  +    ++V Y+ L+   CK+G   +A +++N
Sbjct: 322 CTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFN 381

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
           +M+  G  P+  ++  LL G      + +  NV   +V N      HV    +    + G
Sbjct: 382 SMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCG 441

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
           R  +A   F +   + +  D+V+YT  I GL + GR ++A   + QM    + P+  T+ 
Sbjct: 442 RLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFN 501

Query: 537 VMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNL 596
            ++  F      +  + L  +++D  I  + +T   +   +FK    + A      M   
Sbjct: 502 TLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRA 561

Query: 597 GLIPD 601
           G  P+
Sbjct: 562 GAKPN 566



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 93/419 (22%), Positives = 176/419 (42%), Gaps = 26/419 (6%)

Query: 115 CVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI 174
           C     ++   +  +++    G     F +M   G  PN    N V+D L K+  +D   
Sbjct: 248 CPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAE 307

Query: 175 KVLK----ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCF 230
            VL+    E  +PN  ++N  +         +    ++  M R G  PNV  + +L++C 
Sbjct: 308 AVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCL 367

Query: 231 CKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNV 290
           CK G  AEA ++   MI  G   + + +  L+ G+     L     + + MVQNG  P  
Sbjct: 368 CKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGR 427

Query: 291 VTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDG 350
             +   I  + +      A    + ++ +G  PD+V +  +ID L K+G  DDA+  +  
Sbjct: 428 HVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQ 487

Query: 351 LLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGF 407
           +++  L PD  TF +L+    L G++    +L   +    +  ++  +N+++    K G 
Sbjct: 488 MIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGK 547

Query: 408 PNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI-------------------N 448
             +A KL++ M   G  P+  S+  ++ G   A ++ E +                    
Sbjct: 548 VTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNT 607

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
           +  G+V      +      ++D   E GR    + LFR  + +    D ++  + +RG+
Sbjct: 608 LLDGMVSMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITENIKLRGV 666



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 117/279 (41%), Gaps = 22/279 (7%)

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVC---LSGRFSLLPKLVCGL----------EV 388
           +DALD++D LL+       Y    LL+TV    +S      P L   +          +V
Sbjct: 81  EDALDLFDELLQRARPGSIYALNQLLTTVARAPVSSSVRDGPALAVSMFNRMARAGAKKV 140

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
             D+  +  L+S  C AG  N        ++  G      +F  LLR LC  ++  +A+N
Sbjct: 141 APDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMN 200

Query: 449 VYQGIVMNNPAV----NAHVHTAIVDRLIEAGRCHKAIQLFRRAIV--EKYPLDVVSYTV 502
           +   ++   P +    +   +T ++  L    +C +A +L        +  P +VVSYT 
Sbjct: 201 I---VLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTT 257

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
            I G  + G   +AY L+ +M    +PPN  T   ++   CK + +   + +LQ +ID  
Sbjct: 258 VIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEH 317

Query: 563 IELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           I  +  T   L          + AV  L EM   G  P+
Sbjct: 318 IMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPN 356



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/286 (21%), Positives = 116/286 (40%), Gaps = 44/286 (15%)

Query: 307 SIAFSFLDMLESEGH---APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
           ++A S  + +   G    APD+    +LI C    G  +        +++  L   + TF
Sbjct: 123 ALAVSMFNRMARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTF 182

Query: 364 CSLLSTVCLSGRFS--------LLPKLVC------------------------------- 384
             LL T+C   R S         +P+L C                               
Sbjct: 183 TPLLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMA 242

Query: 385 --GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
             G     ++V Y  ++  F K G   +A  L+  MLD G  P+  +   ++ GLC  + 
Sbjct: 243 EDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQA 302

Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTV 502
           +D+A  V Q ++  +   N   + +++   + +G+  +A+++ +    +    +VV+Y++
Sbjct: 303 MDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSM 362

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
            I  L + G   EA  +++ M      PNA TY  +L  +  E N+
Sbjct: 363 LIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNL 408


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/472 (22%), Positives = 200/472 (42%), Gaps = 39/472 (8%)

Query: 122 FLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK--------------- 166
           ++  +R Y R       ++AF+ M  F   P   A N +MD L                 
Sbjct: 54  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 113

Query: 167 --------------------IGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKD 206
                                 R  + +++L+       +++   +C L       + + 
Sbjct: 114 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQ 173

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
           +   M+    +PN+  F  +L+  CK G + EA  LLG +I  G S+++  + + I G  
Sbjct: 174 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLC 233

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
              RL  A  L + M      P+VVTY +LI+G  +  M   A  +L  + ++G  PD  
Sbjct: 234 EAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF 292

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL 386
            +N +ID   K+    +A ++    +    VPD  T+CSL++ +C  G      +L    
Sbjct: 293 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 352

Query: 387 E---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
           +   ++ D+VVYN+L+   C  G    A+++ N M ++G  PD  ++  ++ GLC    I
Sbjct: 353 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 412

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
            +A  V    +M     +      ++D   +  +   A+QL  R        D ++Y   
Sbjct: 413 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 472

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
           + GL + G+  E    + +M      PN  TY +++ +FC+   ++   +++
Sbjct: 473 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVI 524



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 118/467 (25%), Positives = 207/467 (44%), Gaps = 10/467 (2%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRV-DLGI---KVLKETQLPNFLSFNIALCNLCK 197
           FD+M      PN  A N V+  L K G V + G+   KV++     N  ++NI +  LC+
Sbjct: 175 FDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCE 234

Query: 198 LNDVSN-VKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
              +   V+ V GM  R    P+V  +  L+   CK     EA   L  M+  G      
Sbjct: 235 AGRLPEAVRLVDGM--RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF 292

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
            +  +IDG+ ++  +  A  L +  V  G  P+ VTY SLI G         A    +  
Sbjct: 293 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 352

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
           +++G  PD+V +N L+  L   G    AL V + + E    PD  T+  +++ +C  G  
Sbjct: 353 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 412

Query: 377 SLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
           S    ++    ++    D+  +N L+  +CK    + A++L   M + G  PD  ++  +
Sbjct: 413 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 472

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           L GLC A K++E    +Q +++     N   +  +++    + +  +A ++  +   E  
Sbjct: 473 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 532

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
             D VS+   I G    G  E AY+L+ +++       A T+  ++ +F  + N+ M ++
Sbjct: 533 HPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEK 592

Query: 554 LLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           +  +++      D +T   L     K  +   A   LVEM   G IP
Sbjct: 593 IFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIP 639



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 99/444 (22%), Positives = 194/444 (43%), Gaps = 44/444 (9%)

Query: 136 GMVLEAFDEMGRF---GFTPNTFARNIVMDVLFKIGRVDLGIKV---LKETQLPNFLSFN 189
           G VLEA   +G+    G + N F  NI +  L + GR+   +++   ++   +P+ +++N
Sbjct: 201 GDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYN 260

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
             +  LCK +        +  M+ +G  P+   +  +++ +CK+  + EA +LL   +  
Sbjct: 261 TLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFK 320

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           G       +  LI+G      ++ A  L+ +    G  P++V Y SL+KG     +   A
Sbjct: 321 GFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHA 380

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL-------------DVY------DG 350
              ++ +  EG  PD+  +N++I+ L KMG+  DA              DV+      DG
Sbjct: 381 LQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDG 440

Query: 351 ----------------LLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---D 391
                           + E  + PD+ T+ S+L+ +C +G+ + + +    + ++    +
Sbjct: 441 YCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPN 500

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
            + YN L+  FC++    +A K+   M  +G  PD  SF  L+ G C    ++ A  ++Q
Sbjct: 501 PITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQ 560

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
            +     +  A     ++         H A ++F   + + +  D  +Y V I G  +  
Sbjct: 561 KLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTA 620

Query: 512 RTEEAYILYSQMKHIAVPPNAYTY 535
             + AY+   +M      P+  T+
Sbjct: 621 NVDRAYMHLVEMIKKGFIPSMSTF 644



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 96/471 (20%), Positives = 192/471 (40%), Gaps = 14/471 (2%)

Query: 97  TGRF-ETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
            GR  E VR + G   R   V    T+   +R   +  M    +     M   G  P+ F
Sbjct: 235 AGRLPEAVRLVDG--MRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF 292

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNL----CKLNDVSNVKDVIGMM 211
             N ++D   KI  V    ++LK+     F+   +  C+L    C   DV    ++    
Sbjct: 293 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 352

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
             KG  P++ ++  L+   C  G I  A Q++  M   G    +  + ++I+G  ++  +
Sbjct: 353 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 412

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
             A  +    +  G  P+V T+ +LI G+ +      A   ++ +   G APD + +N +
Sbjct: 413 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 472

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA- 390
           ++ L K G  ++  + +  ++     P+  T+  L+   C S +     K++  +  E  
Sbjct: 473 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 532

Query: 391 --DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
             D V +N L+  FC+ G    A  L+  + +KG++    +F  L+    G   +  A  
Sbjct: 533 HPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEK 592

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           ++  ++      +++ +  ++D   +     +A       I + +   + ++   I  L 
Sbjct: 593 IFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLT 652

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
              R  +A  +   M  I V P      V  +    ++ I   K L++D++
Sbjct: 653 VNHRVFQAVGIIHIMVKIGVVPEV----VDTILNADKKEIAAPKILVEDLM 699



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 81/378 (21%), Positives = 156/378 (41%), Gaps = 8/378 (2%)

Query: 227 LNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGC 286
           +  + + GR+ +A      M       +  A+  ++D        D A  ++ +M+  G 
Sbjct: 58  IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGV 117

Query: 287 SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALD 346
           SP++ T+T  ++ F       IA   L  L   G     V +  ++  L   G   DA  
Sbjct: 118 SPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQ 173

Query: 347 VYDGLLELKLVPDSYTFCSLLSTVCLSG---RFSLLPKLVCGLEVEADLVVYNALLSYFC 403
           ++D +L   + P+   F  +L  +C  G      LL   V    +  +L  YN  +   C
Sbjct: 174 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLC 233

Query: 404 KAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAH 463
           +AG   +AV+L + M      PD  ++  L+RGLC      EA++  + ++      +  
Sbjct: 234 EAGRLPEAVRLVDGMRAYA-VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF 292

Query: 464 VHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM 523
            +  I+D   +     +A +L + A+ + +  D V+Y   I GL   G  E A  L+++ 
Sbjct: 293 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 352

Query: 524 KHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSS 583
           +   + P+   Y  ++   C +  I    +++ ++ +     D  T   +   + K  + 
Sbjct: 353 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 412

Query: 584 SSAVNQLVEMCNLGLIPD 601
           S A   + +    G +PD
Sbjct: 413 SDATVVMNDAIMKGYLPD 430



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/282 (22%), Positives = 129/282 (45%), Gaps = 5/282 (1%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D+Q+++ +I+ + ++ G       ++ +    G +    TF   +  Y +       L+ 
Sbjct: 395 DIQTYNIVINGLCKM-GNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQL 453

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
            + M  +G  P+T   N V++ L K G+V+   +  +E  L    PN +++NI + N C+
Sbjct: 454 VERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCR 513

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            N +     VI  M ++G +P+   F  L+  FC+ G +  AY L   +   G S + + 
Sbjct: 514 SNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADT 573

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  LI  F     + MA  ++++M+  G   +  TY  LI G  +      A+  L  + 
Sbjct: 574 FNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMI 633

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
            +G  P +     +I+ L+       A+ +   ++++ +VP+
Sbjct: 634 KKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPE 675



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/267 (23%), Positives = 116/267 (43%), Gaps = 2/267 (0%)

Query: 293 YTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
           Y + I+ +  A     A    + ++     P    +N ++D L     +D A  VY  +L
Sbjct: 54  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 113

Query: 353 ELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAV 412
              + PD +T    L + CL+ R  +  +L+  L      V Y  ++      G  + A 
Sbjct: 114 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG-AVAYCTVVCGLYAHGHTHDAR 172

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
           +L++ ML     P+  +F  +L  LC    + EA  +   ++    ++N   +   +  L
Sbjct: 173 QLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGL 232

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
            EAGR  +A++L         P DVV+Y   IRGL +    +EA     +M +    P+ 
Sbjct: 233 CEAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDD 291

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVI 559
           +TY  ++  +CK   ++    LL+D +
Sbjct: 292 FTYNTIIDGYCKISMVQEATELLKDAV 318



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 54/255 (21%), Positives = 103/255 (40%), Gaps = 7/255 (2%)

Query: 77  RDYFHDVQSFDHMIS-VVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
           + Y  DV +F+ +I     RL  + ++   +V  +   G      T+   L    +    
Sbjct: 425 KGYLPDVFTFNTLIDGYCKRL--KLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKV 482

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIA 191
             V E F EM   G  PN    NI+++   +  +++   KV+    +E   P+ +SFN  
Sbjct: 483 NEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTL 542

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           +   C+  D+     +   +  KG+      F  L+  F     +  A ++   M++ G 
Sbjct: 543 IYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGH 602

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
                 + VLIDG  +   +D A     +M++ G  P++ T+  +I           A  
Sbjct: 603 RADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVG 662

Query: 312 FLDMLESEGHAPDLV 326
            + ++   G  P++V
Sbjct: 663 IIHIMVKIGVVPEVV 677



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 63/276 (22%), Positives = 109/276 (39%), Gaps = 47/276 (17%)

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
           +Y A +  + +AG    AV  +  M      P   ++  ++  L  A   D+A  VY  +
Sbjct: 53  LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM 112

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
           +    + + H HT  +       R H A++L  RA+  +     V+Y   + GL   G T
Sbjct: 113 LAAGVSPDLHTHTIRLRSFCLTARPHIALRLL-RALPHR---GAVAYCTVVCGLYAHGHT 168

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD---YHTS 570
            +A  L+ QM H  V PN   +  +L + CK  ++     LL  VI   + ++   Y+  
Sbjct: 169 HDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIW 228

Query: 571 IR-------------------------------LTKFIFKFHSSSSAVNQLVEMCNLGLI 599
           IR                               L + + K      A++ L  M N G +
Sbjct: 229 IRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL 288

Query: 600 PDEM--------WRKLGLLSDET-MTPVSLFDGFVP 626
           PD+         + K+ ++ + T +   ++F GFVP
Sbjct: 289 PDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVP 324



 Score = 42.0 bits (97), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 25/100 (25%), Positives = 46/100 (46%)

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
           +PA    ++ A +     AGR   A+  F R  +   P    +Y   +  L++    ++A
Sbjct: 46  SPATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQA 105

Query: 517 YILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
           + +Y +M    V P+ +T+ + L SFC      +  RLL+
Sbjct: 106 HKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLR 145


>gi|125582060|gb|EAZ22991.1| hypothetical protein OsJ_06687 [Oryza sativa Japonica Group]
          Length = 466

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/428 (25%), Positives = 196/428 (45%), Gaps = 11/428 (2%)

Query: 112 RVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD 171
           R  C     TF   +R + +  +    ++  D+M R+G TP+    + +++   + G VD
Sbjct: 35  RNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVD 94

Query: 172 LGIKVLKETQL--PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
             + +L  T L  PN + +N AL  LC      ++ +++  MVRKG  PN   F +L++ 
Sbjct: 95  QALDLLN-TMLCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISS 153

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
            C+   +  A ++L  M   G       + ++I+      R+D A  L   MV   C P+
Sbjct: 154 LCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPD 210

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFL-DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVY 348
            + + +++KGF  A+ +  A   +  M   +    ++ F N+LID L + G  + A  V+
Sbjct: 211 ALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTF-NILIDMLCQNGLVNYATQVF 269

Query: 349 DGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFP 408
           + +   +  PD  T+ SLL+     G   +  +L   +  + D+  YNA+L   C+A   
Sbjct: 270 EQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCKPDIFSYNAVLKGLCRAARW 329

Query: 409 NQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAI 468
             A +L   M+ K   P+  +F  L+  LC    +D AI V + +       +   + A+
Sbjct: 330 EDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNAL 389

Query: 469 VDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAV 528
           ++   E GR   A++L      +    D +SY   ++GL    R ++A  L ++M     
Sbjct: 390 INGFSEQGRLDDALKLLSTMSCKP---DAISYNSTLKGLCRAERWQDAEELVAEMLRNKC 446

Query: 529 PPNAYTYR 536
            PN  T++
Sbjct: 447 TPNEVTFK 454



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 108/447 (24%), Positives = 190/447 (42%), Gaps = 79/447 (17%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+  ++N  L  LC        ++++  M+R    PN   F   +  FC+ G +  A QL
Sbjct: 5   PDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQL 64

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA---------------------------- 274
           L  M   G +  V  ++ LI+GF     +D A                            
Sbjct: 65  LDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCKPNTVCYNAALKGLCIAER 124

Query: 275 ----GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
               G L  +MV+ GCSPN  T++ LI    +  +   A   L+ +E  G  PD V +N+
Sbjct: 125 WEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNI 184

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR--------------- 375
           +I+ LS+ G  DDAL + + ++     PD+  F ++L   C + R               
Sbjct: 185 IINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDD 241

Query: 376 -------FSLLPKLVC--GL--------------EVEADLVVYNALLSYFCKAGFPNQAV 412
                  F++L  ++C  GL                  D+V Y++LL+ F + G    A+
Sbjct: 242 CPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAI 301

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
           +L+ +M  K   PD +S+  +L+GLC A + ++A  +   +V  +   N      +++ L
Sbjct: 302 QLFRSMPCK---PDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSL 358

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
            + G   +AI++  +        D+ +Y   I G  E GR ++A  L S M   +  P+A
Sbjct: 359 CQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTM---SCKPDA 415

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVI 559
            +Y   L   C+    +  + L+ +++
Sbjct: 416 ISYNSTLKGLCRAERWQDAEELVAEML 442



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/288 (22%), Positives = 116/288 (40%), Gaps = 38/288 (13%)

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
           ++N C PN VT+ + I+ F +  +   A   LD +   G  PD+V ++ LI+  S+ G  
Sbjct: 34  IRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHV 93

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSY 401
           D ALD+ + +L           C               P  VC          YNA L  
Sbjct: 94  DQALDLLNTML-----------CK--------------PNTVC----------YNAALKG 118

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVN 461
            C A       +L   M+ KG +P+  +F  L+  LC    +D A+ V + +       +
Sbjct: 119 LCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPD 178

Query: 462 AHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYS 521
              +  I++ L E GR   A++L    + +    D + +   ++G     R  +A  L +
Sbjct: 179 TVNYNIIINSLSERGRVDDALRLLNSMVCKP---DALGFNAVLKGFCRAERWHDASELIA 235

Query: 522 QMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
           QM     P    T+ +++   C+   +    ++ + +   R   D  T
Sbjct: 236 QMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVT 283



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/240 (18%), Positives = 106/240 (44%), Gaps = 6/240 (2%)

Query: 354 LKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQ 410
           + + PD+YT+ ++L  +C++ ++    +L+  +       + V +   +  FC+ G  ++
Sbjct: 1   MPVAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDR 60

Query: 411 AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
           AV+L + M   G TPD   +  L+ G      +D+A+++   ++      N   + A + 
Sbjct: 61  AVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCK---PNTVCYNAALK 117

Query: 471 RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
            L  A R     +L    + +    +  ++++ I  L +    + A  +  QM+     P
Sbjct: 118 GLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEP 177

Query: 531 NAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQL 590
           +   Y +++ S  +   +    RLL  ++     L ++  ++      ++H +S  + Q+
Sbjct: 178 DTVNYNIIINSLSERGRVDDALRLLNSMVCKPDALGFNAVLKGFCRAERWHDASELIAQM 237


>gi|255579531|ref|XP_002530608.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223529856|gb|EEF31788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 596

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/510 (21%), Positives = 229/510 (44%), Gaps = 43/510 (8%)

Query: 65  IALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCV-IKAQTFL 123
           +   FF+W +KQ  Y H  +++  M+ + +++  +F  V  ++ E+ +   V I ++ F+
Sbjct: 122 LGYRFFVWASKQPGYRHSYENYKAMVKIFSKMR-QFGAVWALLEEMRKDNSVLITSELFI 180

Query: 124 LFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL- 182
           + +R +    +    +E  DEM ++G  P+ +    ++D L K G V     + ++ ++ 
Sbjct: 181 VLIRRFASARLVEKAIEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKQAASLFEDMRVR 240

Query: 183 --PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAY 240
             P+   F   L   C+   +   K V+  M   GF P++ +F  LL+ +   G++ +A+
Sbjct: 241 FSPSLRHFTSLLYGWCREGKLIEAKHVLVQMREAGFEPDIVVFNNLLSAYSMAGKMTDAF 300

Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
            LL  M+  G   + N++T++I  F    ++D A  ++ +M + GC  +VVTYT+LI GF
Sbjct: 301 DLLKEMVRKGCEPNANSYTIMIQAFCSQEKMDEAMRVFVEMERTGCEADVVTYTALISGF 360

Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
            +    +  +  LD ++ +GH P+ + +  ++    K    ++ L++ + +  +  VP  
Sbjct: 361 CKWGKINRGYQILDAMKQKGHMPNQLTYLRILLAHEKKEELEECLELIESMRMVGCVP-- 418

Query: 361 YTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
                                         DL +YN ++   CK G   Q V+++N M  
Sbjct: 419 ------------------------------DLSIYNVVIRLACKLGEVKQGVQIWNEMEA 448

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV----MNNPAVNAHVHTAIVDRLIEAG 476
             F+P+  +FV ++ G  G   + EA   ++ ++    +  P     +   +++ L+   
Sbjct: 449 SDFSPELDTFVIMIHGFLGQGCLVEACEYFKEMIGRGLLTTPQYG--ILKELLNALLRGE 506

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
           +   A  ++   + +   L+  ++T+ I  L   G  +EA      M    + P   T+ 
Sbjct: 507 KLGMAKDVWSCIVTKGCELNADAWTIWIHSLFSNGHVKEACSYCLDMMEADIMPKPETFA 566

Query: 537 VMLLSFCKERNIKMVKRLLQDVIDARIELD 566
            ++    K  N +    + + + D    +D
Sbjct: 567 KLMRGLRKLYNREFAAEITEKIKDFHFSVD 596



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 76/386 (19%), Positives = 165/386 (42%), Gaps = 8/386 (2%)

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
            +F +L+  F     + +A ++L  M   G       +  L+D   +   +  A  L+E 
Sbjct: 177 ELFIVLIRRFASARLVEKAIEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKQAASLFED 236

Query: 281 MVQNGCSPNVVTYTSLIKGF-MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
           M +   SP++  +TSL+ G+  E K+       + M E+ G  PD+V  N L+   S  G
Sbjct: 237 M-RVRFSPSLRHFTSLLYGWCREGKLIEAKHVLVQMREA-GFEPDIVVFNNLLSAYSMAG 294

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYN 396
              DA D+   ++     P++ ++  ++   C   +     ++   +E    EAD+V Y 
Sbjct: 295 KMTDAFDLLKEMVRKGCEPNANSYTIMIQAFCSQEKMDEAMRVFVEMERTGCEADVVTYT 354

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
           AL+S FCK G  N+  ++ + M  KG  P+  +++ +L       +++E + + + + M 
Sbjct: 355 ALISGFCKWGKINRGYQILDAMKQKGHMPNQLTYLRILLAHEKKEELEECLELIESMRMV 414

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
               +  ++  ++    + G   + +Q++       +  ++ ++ + I G L  G   EA
Sbjct: 415 GCVPDLSIYNVVIRLACKLGEVKQGVQIWNEMEASDFSPELDTFVIMIHGFLGQGCLVEA 474

Query: 517 YILYSQM--KHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLT 574
              + +M  + +   P     + +L +  +   + M K +   ++    EL+        
Sbjct: 475 CEYFKEMIGRGLLTTPQYGILKELLNALLRGEKLGMAKDVWSCIVTKGCELNADAWTIWI 534

Query: 575 KFIFKFHSSSSAVNQLVEMCNLGLIP 600
             +F       A +  ++M    ++P
Sbjct: 535 HSLFSNGHVKEACSYCLDMMEADIMP 560



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/211 (22%), Positives = 89/211 (42%), Gaps = 11/211 (5%)

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
           L+  F  A    +A+++ + M   G  PD Y F  LL  LC    + +A ++++ + +  
Sbjct: 182 LIRRFASARLVEKAIEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKQAASLFEDMRVRF 241

Query: 458 PAVNAHVHTAIVD-----RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
                H  + +       +LIEA   H  +Q+ R A  E    D+V +   +      G+
Sbjct: 242 SPSLRHFTSLLYGWCREGKLIEAK--HVLVQM-REAGFEP---DIVVFNNLLSAYSMAGK 295

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
             +A+ L  +M      PNA +Y +M+ +FC +  +    R+  ++     E D  T   
Sbjct: 296 MTDAFDLLKEMVRKGCEPNANSYTIMIQAFCSQEKMDEAMRVFVEMERTGCEADVVTYTA 355

Query: 573 LTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           L     K+   +     L  M   G +P+++
Sbjct: 356 LISGFCKWGKINRGYQILDAMKQKGHMPNQL 386


>gi|255554881|ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542323|gb|EEF43865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 139/597 (23%), Positives = 262/597 (43%), Gaps = 85/597 (14%)

Query: 59  NCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIK 118
           N P   +AL F  W  +++   H ++S   +I V+   + R++    I+G L  V  +  
Sbjct: 19  NSPQ--LALEFHDWVLEKKSVLHSIESCCVVIHVLVN-SKRYDDALFIMGNLMNVNGISP 75

Query: 119 AQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK 178
            +     +  Y   ++       FD + R                  +IG  +   +V+ 
Sbjct: 76  LEVLDALISSY---DICKSSPAVFDALVR---------------TCTQIGATEGAYEVIT 117

Query: 179 ETQLPNFL----SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
           + QL  F     ++N  L +L KLNDV+    +   MV  G+  NV  F +++    K G
Sbjct: 118 KLQLDGFWVTVHAWNNFLSHLLKLNDVNRFWKMYKEMVSYGYIENVNTFNLIIYALGKEG 177

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM-VQNGCS------ 287
           R+ EA  ++   +  G   +V  + ++IDG  ++  +D+A  L  KM V +GCS      
Sbjct: 178 RLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDSV 237

Query: 288 -------------------------------PNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
                                          PNV TY +L+ G+        AF   D L
Sbjct: 238 TYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDEL 297

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG-- 374
             +G  P+ V +N +I  LS  G  + A  +   +++ ++ PD +T+  ++  +C +G  
Sbjct: 298 VEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYL 357

Query: 375 --RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
              F  L +++  + +  D   +N +++Y C++     A +L   M  +G  PD  +F  
Sbjct: 358 NEAFKFL-QMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGT 416

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL---FRRAI 489
           L+   C   K++ AI VY+ ++      N  ++ ++++   + G    AI L    RR  
Sbjct: 417 LIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILLIDTLRRMG 476

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
           +     DVV+Y   I G    G+ ++A+ L+S+M++  +  +  TY  ++ S CK  ++ 
Sbjct: 477 L----FDVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCKAGHVL 532

Query: 550 MVKRLLQDVIDARIELDYHT-SIRLTKFIFKFHSSSSAVNQLVEMCNL----GLIPD 601
             K L++ ++   +  DY T +I +T F     S   +  +++E+ +     G++PD
Sbjct: 533 QAKELMKMMVLRGLIPDYVTYTILITSF-----SKKCSPEEVIELHDYMVLKGVVPD 584



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 110/456 (24%), Positives = 219/456 (48%), Gaps = 21/456 (4%)

Query: 109 ELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGR---FGFTPNTFARNIVMDVLF 165
           E+   G +    TF L   IY  G+  G ++EA   + R    G  PN    N+++D   
Sbjct: 153 EMVSYGYIENVNTFNLI--IYALGK-EGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAI 209

Query: 166 KIGRVDLGIKVLKETQL-------PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYP 218
           K+G +DL +K++++ ++       P+ +++N  +   CK+ +++  ++    M+ K   P
Sbjct: 210 KMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEP 269

Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
           NVR +  L++ + ++G +  A++L   ++  G   +   +  +I        ++ A  L 
Sbjct: 270 NVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLL 329

Query: 279 EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
             M+     P+  TY+ +I+G       + AF FL M+       D   HNV+I+ L + 
Sbjct: 330 SDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRS 389

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVV 394
            +   A  +   +    LVPD  TF +L+   C  G+      +  K++   E + +L++
Sbjct: 390 NNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGE-KPNLLI 448

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           YN++++ F K G  + A+ L +T+   G   D  ++  L+ G C   KID+A  ++  + 
Sbjct: 449 YNSVINGFAKEGSFDPAILLIDTLRRMGLF-DVVTYNTLIHGYCNCGKIDQAFALFSEM- 506

Query: 455 MNNPAVNAHV-HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
            N+  + +HV +  +++ L +AG   +A +L +  ++     D V+YT+ I    +    
Sbjct: 507 RNSGILASHVTYNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKKCSP 566

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
           EE   L+  M    V P+  TY+ M++   +E +++
Sbjct: 567 EEVIELHDYMVLKGVVPDRQTYQTMVIPLLQEESVE 602



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/279 (20%), Positives = 117/279 (41%), Gaps = 22/279 (7%)

Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST--VCLSGRFSLLPKLVCGLE 387
           V+I  L     YDDAL +   L+ +  +       +L+S+  +C S              
Sbjct: 46  VVIHVLVNSKRYDDALFIMGNLMNVNGISPLEVLDALISSYDICKSSP------------ 93

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
                 V++AL+    + G    A ++   +   GF    +++   L  L     ++   
Sbjct: 94  -----AVFDALVRTCTQIGATEGAYEVITKLQLDGFWVTVHAWNNFLSHLLKLNDVNRFW 148

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            +Y+ +V      N +    I+  L + GR  +A+ +  R++      +VV++ + I G 
Sbjct: 149 KMYKEMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGA 208

Query: 508 LEGGRTEEAYILYSQMKHIA---VPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
           ++ G  + A  L  +M+ ++   V P++ TY   +  FCK  N+ + +   ++++   IE
Sbjct: 209 IKMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIE 268

Query: 565 LDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
            +  T   L     +  S  +A     E+   GL+P+ +
Sbjct: 269 PNVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSV 307


>gi|326491875|dbj|BAJ98162.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 628

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 122/504 (24%), Positives = 224/504 (44%), Gaps = 40/504 (7%)

Query: 65  IALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVG-CVIKAQTFL 123
           + + FF W A++R+Y HD  ++  +I  +  +  ++  +  ++ E+ R   CV+      
Sbjct: 101 VKMQFFRWAARKRNYEHDTSTYMALIRCL-EVVEQYGEMWKMIQEMVRNPVCVVTPMELS 159

Query: 124 LFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP 183
             +R+    +M    +  F ++      P   A N ++ +L   G  +      K  +L 
Sbjct: 160 DIIRMLGNAKMISKAVAIFYQIKARKCQPTAHAYNSMIIMLMHEGEYE------KVHELY 213

Query: 184 NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
           N +S N   C                       +P+   +  L++ FCK+GR   A  LL
Sbjct: 214 NEMS-NEGQC-----------------------FPDTVTYSALISAFCKLGRQDSAIWLL 249

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
             M   G   +   +T+L+    +L  +  A  L+E+M    C P+V TYT LI+G  +A
Sbjct: 250 NEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKA 309

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
                A++F   +  EG  PD V  N +I+ L K G  DDA+ +++ +  L+ +P   T+
Sbjct: 310 GRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRLDDAIKLFEEMETLRCIPSVVTY 369

Query: 364 CSLLSTVCLS-GRFSLLP---KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
            +++  +  S  R S +    + + G  +      Y+ L+  FCK     +A+ L   M 
Sbjct: 370 NTIIKALFESKSRVSEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMD 429

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
           +KGF P   ++  L+  L  A++ D A  ++Q +  N  + +A V+  ++  L +AGR  
Sbjct: 430 EKGFPPCPAAYCSLIDALGKAKRYDLANELFQELKENCGSSSARVYAVMIKHLGKAGRLD 489

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
            A+ LF          +V +Y   + GL   G  +EA     +M+     P+  +Y ++L
Sbjct: 490 DAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHGCIPDINSYNIIL 549

Query: 540 LSFCK----ERNIKMVKRLLQDVI 559
            +  K    +R + M+  + Q  I
Sbjct: 550 NALAKTGGPDRAMGMLCNMKQSAI 573



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 111/496 (22%), Positives = 207/496 (41%), Gaps = 25/496 (5%)

Query: 25  FKSIHQISSPKVCATTHQDFPIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQ 84
           +K I ++    VC  T    P+ L+  I         S  +A+ + I   K +   H   
Sbjct: 139 WKMIQEMVRNPVCVVT----PMELSDIIRMLGNAKMISKAVAIFYQIKARKCQPTAH--- 191

Query: 85  SFDHMISVVTRLTGRFETVRGIVGELARVG-CVIKAQTFLLFLRIYWRGEMYGMVLEAFD 143
           +++ MI ++    G +E V  +  E++  G C     T+   +  + +       +   +
Sbjct: 192 AYNSMIIMLMH-EGEYEKVHELYNEMSNEGQCFPDTVTYSALISAFCKLGRQDSAIWLLN 250

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLN 199
           EM   G  P      ++M +LFK+  V   + + +E +     P+  ++   +  L K  
Sbjct: 251 EMKDNGMQPTAKIYTMLMALLFKLDNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAG 310

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
            +    +    M R+G  P+  +   ++N   K GR+ +A +L   M TL    SV  + 
Sbjct: 311 RLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRLDDAIKLFEEMETLRCIPSVVTYN 370

Query: 260 VLIDG-FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
            +I   F    R+      +E+M  +G SP+  TY+ LI GF +      A   L+ ++ 
Sbjct: 371 TIIKALFESKSRVSEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDE 430

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR--- 375
           +G  P    +  LID L K   YD A +++  L E      +  +  ++  +  +GR   
Sbjct: 431 KGFPPCPAAYCSLIDALGKAKRYDLANELFQELKENCGSSSARVYAVMIKHLGKAGRLDD 490

Query: 376 ----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
               F  + +L C   V A    YNAL+S   +AG  ++A+     M D G  PD  S+ 
Sbjct: 491 AVDLFDEMNRLGCTPNVYA----YNALMSGLARAGMLDEALTTMRRMQDHGCIPDINSYN 546

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            +L  L      D A+ +   +  +    +A  +  ++  L  AG   +A +L +     
Sbjct: 547 IILNALAKTGGPDRAMGMLCNMKQSAIKPDAVSYNTVLGALSHAGMFEEAAKLMKEMNAI 606

Query: 492 KYPLDVVSYTVAIRGL 507
            +  D+++Y+  +  +
Sbjct: 607 GFDYDLITYSSILEAI 622



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/212 (23%), Positives = 96/212 (45%), Gaps = 7/212 (3%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFL 186
           R E   M+LE  DE G   F P   A   ++D L K  R DL  ++ +E +      +  
Sbjct: 417 RTEKAMMLLEEMDEKG---FPPCPAAYCSLIDALGKAKRYDLANELFQELKENCGSSSAR 473

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
            + + + +L K   + +  D+   M R G  PNV  +  L++   + G + EA   +  M
Sbjct: 474 VYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRM 533

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
              G    +N++ ++++   +    D A  +   M Q+   P+ V+Y +++     A MF
Sbjct: 534 QDHGCIPDINSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDAVSYNTVLGALSHAGMF 593

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
             A   +  + + G   DL+ ++ +++ + K+
Sbjct: 594 EEAAKLMKEMNAIGFDYDLITYSSILEAIGKV 625



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 90/209 (43%), Gaps = 2/209 (0%)

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFT-PDNYSFVGLLRGLCGARKIDEAINVYQG 452
            YN+++      G   +  +LYN M ++G   PD  ++  L+   C   + D AI +   
Sbjct: 192 AYNSMIIMLMHEGEYEKVHELYNEMSNEGQCFPDTVTYSALISAFCKLGRQDSAIWLLNE 251

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           +  N     A ++T ++  L +    H A+ LF     +    DV +YT  IRGL + GR
Sbjct: 252 MKDNGMQPTAKIYTMLMALLFKLDNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGR 311

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
            +EAY  + +M+     P+      M+    K   +    +L +++   R      T   
Sbjct: 312 LDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRLDDAIKLFEEMETLRCIPSVVTYNT 371

Query: 573 LTKFIFKFHSSSSAVNQLVE-MCNLGLIP 600
           + K +F+  S  S ++   E M   G+ P
Sbjct: 372 IIKALFESKSRVSEISSWFERMKGSGISP 400



 Score = 47.8 bits (112), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 72/171 (42%), Gaps = 3/171 (1%)

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           ++R L  A+ I +A+ ++  I        AH + +++  L+  G   K  +L+     E 
Sbjct: 161 IIRMLGNAKMISKAVAIFYQIKARKCQPTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEG 220

Query: 493 --YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
             +P D V+Y+  I    + GR + A  L ++MK   + P A  Y +++    K  N+  
Sbjct: 221 QCFP-DTVTYSALISAFCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHG 279

Query: 551 VKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
              L +++       D  T   L + + K      A N   EM   G  PD
Sbjct: 280 ALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPD 330


>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 942

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 107/435 (24%), Positives = 197/435 (45%), Gaps = 15/435 (3%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLS----FNIALC 193
            L  ++ M + G  PN      ++D  FK+G  D  + + K+     F      +N  +C
Sbjct: 485 ALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMIC 544

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
             CK+  +   +++   M   GF P+   +  L++ +CK+G + EA +L  +    G S 
Sbjct: 545 GFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISS 604

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
           S   +  LI G  R   L     L  +M     SPNVVTY SLI G+ +  M   A++  
Sbjct: 605 STEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAY 664

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL------- 366
             +  +G AP+++  + ++  L + G  D+A  +   + ++  +        L       
Sbjct: 665 FKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRH 724

Query: 367 LSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
           L T  +   F    K    + +  + +VYN  ++  CK+   +   ++ + +L KGF PD
Sbjct: 725 LETQKIVDSFG---KKAMSIPISNN-IVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPD 780

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
           NY++  L+       K++EA  +   ++      N  V+ A+++ L ++G   +A +LF 
Sbjct: 781 NYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFN 840

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
           +   +     VV+Y   I G  +GGRT EA  L  +M+   + P++ TY  ++     E 
Sbjct: 841 KLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEG 900

Query: 547 NIKMVKRLLQDVIDA 561
             +    LL +++ A
Sbjct: 901 KSEQSVGLLNEMMKA 915



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 129/549 (23%), Positives = 240/549 (43%), Gaps = 36/549 (6%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELA------RVGCVIKA 119
           +L FF   +KQ  +  DV S+  ++ +++R    ++ VR  + EL        +   +  
Sbjct: 115 SLEFFKLASKQPKFRPDVSSYCKIVHILSR-ARMYKEVRVYLNELVVLCKNNYIASAVWD 173

Query: 120 QTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE 179
           +   ++    +   ++ M+L+ F E G   F    F      D + K GRV         
Sbjct: 174 ELVSVYREFSFSPTVFDMILKVFAEKGMTKFALCVF------DNMGKCGRV--------- 218

Query: 180 TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEA 239
              P+  S N  L NL +  +      V   M+  G  P++  + I++N +CK GR+ EA
Sbjct: 219 ---PSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEA 275

Query: 240 YQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG 299
           +  +  M       +V  +  LIDG+  L  +  A  +   M + G   N  TYT LIKG
Sbjct: 276 FNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKG 335

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
           + +      A   +  +  +    D   + VLI      G  DDAL + D +L++ L  +
Sbjct: 336 YCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMN 395

Query: 360 SYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYN 416
           +    SL++  C  G  +   +++  ++   ++ D   YN LL  FCK     +A KL +
Sbjct: 396 TVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCD 455

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
            M +KG      ++  LL+ L     ++ A++++  +     A N   +  ++D   + G
Sbjct: 456 EMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVG 515

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
              +A+ +++ A+ + +   +  Y   I G  +  +  +A  ++ +MK +  PP+  TYR
Sbjct: 516 TFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYR 575

Query: 537 VMLLSFCKERN----IKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVE 592
            ++  +CK  N    +K+     +D I +  E+ Y++   L   +F+          L E
Sbjct: 576 TLIDGYCKVGNLVEALKLKDMSERDGISSSTEM-YNS---LITGVFRSEELQKLNGLLAE 631

Query: 593 MCNLGLIPD 601
           M N  L P+
Sbjct: 632 MKNRELSPN 640



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 109/494 (22%), Positives = 209/494 (42%), Gaps = 43/494 (8%)

Query: 124 LFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL- 182
           L   +   GE +  +L  +++M   G  P+ F+  I+++   K GRVD     +KE +  
Sbjct: 227 LLSNLVQNGEAFKALL-VYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERS 285

Query: 183 ---PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEA 239
              PN +++N  +     L DV   K V+ +M  KG   N R + +L+  +CK G++ +A
Sbjct: 286 CCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQA 345

Query: 240 YQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVT------- 292
            +L+G M+     +  + + VLI  +    R+D A  + + M++ G   N V        
Sbjct: 346 EKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLING 405

Query: 293 ----------------------------YTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
                                       Y +L+ GF + + F  AF   D + ++G    
Sbjct: 406 YCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFT 465

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPK 381
           +V +N L+  L  +G  + AL +++ + +  + P+  T+C+LL      G F    ++ K
Sbjct: 466 VVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWK 525

Query: 382 LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
                     + +YN ++  FCK     QA +++  M + GF PD  ++  L+ G C   
Sbjct: 526 DALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVG 585

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYT 501
            + EA+ +      +  + +  ++ +++  +  +    K   L       +   +VV+Y 
Sbjct: 586 NLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYG 645

Query: 502 VAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
             I G  + G  ++AY  Y +M    + PN      ++ S  +   I     +L  + D 
Sbjct: 646 SLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADI 705

Query: 562 RIELDYHTSIRLTK 575
                +  S+ L K
Sbjct: 706 DPIAAHAHSVELPK 719



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 118/514 (22%), Positives = 222/514 (43%), Gaps = 23/514 (4%)

Query: 103 VRGIVGELARVGCVIKAQTFLLFLRIYW-RGEMYGMVLEAFDEMGRFGFTPNTFARNIVM 161
            + ++  ++  G    ++T+ L ++ Y  RG+M     E  +++       N F    V 
Sbjct: 310 AKKVLALMSEKGIPENSRTYTLLIKGYCKRGQM-----EQAEKLIGCMMEKNLFVDEHVY 364

Query: 162 DVLFKI----GRVDLGIKVLKETQLPNFLSFNIALCN-----LCKLNDVSNVKDVIGMMV 212
            VL       GRVD  +++ ++  L   L  N  +CN      CKL  V+   +V+  M 
Sbjct: 365 GVLIHAYCTAGRVDDALRI-RDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMK 423

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
                P+   +  LL+ FCK     +A++L   M   G + +V  +  L+     +  ++
Sbjct: 424 DWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVE 483

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A ++W  M + G +PN VTY +L+  F +   F  A        S+G    +  +N +I
Sbjct: 484 HALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMI 543

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VE 389
               KM     A +++  + EL   PD  T+ +L+   C  G      KL    E   + 
Sbjct: 544 CGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGIS 603

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
           +   +YN+L++   ++    +   L   M ++  +P+  ++  L+ G C    +D+A N 
Sbjct: 604 SSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNA 663

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI-RGLL 508
           Y  ++    A N  + + IV  L   G+  +A  L    I +  P+   +++V + +  L
Sbjct: 664 YFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEA-NLILHQIADIDPIAAHAHSVELPKSDL 722

Query: 509 EGGRTEEAYILYSQMKHIAVP-PNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
               T++    + + K +++P  N   Y + +   CK +NI  V+R+L D++      D 
Sbjct: 723 RHLETQKIVDSFGK-KAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDN 781

Query: 568 HTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           +T   L          + A     +M N GL+P+
Sbjct: 782 YTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPN 815



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 112/502 (22%), Positives = 197/502 (39%), Gaps = 44/502 (8%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G+ E    ++G +      +    + + +  Y         L   D M + G   NT   
Sbjct: 340 GQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVIC 399

Query: 158 NIVMDVLFKIGRVDLGIKVL---KETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N +++   K+G V+   +VL   K+  L P+   +N  L   CK  D      +   M  
Sbjct: 400 NSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHN 459

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           KG    V  +  LL     +G +  A  +  LM   G + +   +  L+D F ++   D 
Sbjct: 460 KGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDR 519

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  +W+  +  G + ++  Y ++I GF + +    A      ++  G  PD + +  LID
Sbjct: 520 AMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLID 579

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEA 390
              K+G+  +AL + D      +   +  + SL++ V  S     L  L+  +   E+  
Sbjct: 580 GYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSP 639

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           ++V Y +L++ +C  G  ++A   Y  M+DKG  P+      ++  L    KIDEA  + 
Sbjct: 640 NVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLIL 699

Query: 451 QGIVMNNPAVNAHVHTA-------------------------------IVDRLIEAGRCH 479
             I   +P + AH H+                                IV  +   G C 
Sbjct: 700 HQIADIDP-IAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAITGLCK 758

Query: 480 -KAIQLFRRAI----VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
            K I   RR +    ++ +  D  +Y   I      G+  EA+ L   M +  + PN   
Sbjct: 759 SKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVV 818

Query: 535 YRVMLLSFCKERNIKMVKRLLQ 556
           Y  ++   CK  N+   +RL  
Sbjct: 819 YNALINGLCKSGNLDRARRLFN 840



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 105/473 (22%), Positives = 195/473 (41%), Gaps = 57/473 (12%)

Query: 137 MVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV--DLGIKVLK-ETQLPNFLSFNIALC 193
           +VL  FD +    F+   F+ N +MD++ +  R+  D  ++  K  ++ P F        
Sbjct: 81  LVLRRFDALANLSFS---FS-NELMDLVLRNLRLNPDASLEFFKLASKQPKFRP------ 130

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
                 DVS+   ++ ++ R   Y  VR++   L   CK   IA A              
Sbjct: 131 ------DVSSYCKIVHILSRARMYKEVRVYLNELVVLCKNNYIASA-------------- 170

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
               W  L+  +R                    SP V  +  ++K F E  M   A    
Sbjct: 171 ---VWDELVSVYREF----------------SFSPTV--FDMILKVFAEKGMTKFALCVF 209

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           D +   G  P L   N L+  L + G    AL VY+ ++ L ++PD +++  +++  C  
Sbjct: 210 DNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKE 269

Query: 374 GRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           GR       V  +E    E ++V YN+L+  +   G    A K+   M +KG   ++ ++
Sbjct: 270 GRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTY 329

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             L++G C   ++++A  +   ++  N  V+ HV+  ++     AGR   A+++    + 
Sbjct: 330 TLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLK 389

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
               ++ V     I G  + G   +A  +   MK   + P++Y Y  +L  FCK+ +   
Sbjct: 390 VGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIK 449

Query: 551 VKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
             +L  ++ +  +     T   L K +F       A++    M   G+ P+E+
Sbjct: 450 AFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEV 502



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 76/350 (21%), Positives = 159/350 (45%), Gaps = 20/350 (5%)

Query: 136 GMVLEAF---DEMGRFGFTPNTFARNIVMDVLFK---IGRVDLGIKVLKETQL-PNFLSF 188
           G ++EA    D   R G + +T   N ++  +F+   + +++  +  +K  +L PN +++
Sbjct: 585 GNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTY 644

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
              +   C    +    +    M+ KG  PN+ +   +++   + G+I EA  +L  +  
Sbjct: 645 GSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIAD 704

Query: 249 LGTSLSVNAWTVLI--DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
           +   ++ +A +V +     R L    +     +K +    S N+V Y   I G  ++K  
Sbjct: 705 I-DPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIV-YNIAITGLCKSKNI 762

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
                 L  L  +G  PD   +  LI   S +G  ++A  + D ++   LVP+   + +L
Sbjct: 763 DDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNAL 822

Query: 367 LSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           ++ +C SG      +L   L    +   +V YN L+  +CK G   +A++L + M ++G 
Sbjct: 823 INGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGI 882

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
            P + ++  L+ GL    K ++++ +       N  + A   ++++D L+
Sbjct: 883 CPSSITYSTLIHGLYMEGKSEQSVGLL------NEMMKAGKGSSVMDPLV 926


>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Glycine max]
          Length = 615

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/369 (26%), Positives = 166/369 (44%), Gaps = 38/369 (10%)

Query: 174 IKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKM 233
           ++VL     P    FN+ +   CK  DV N + V   + ++G  P V  F  L++  CK 
Sbjct: 237 LEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKS 296

Query: 234 GRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTY 293
           G + E ++L G+M + G    V  ++ LI+G  +  RLD    L+++M   G  PN VT+
Sbjct: 297 GDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTF 356

Query: 294 TSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE 353
           T+LI G  +     +A     M+ ++G  PDLV +N LI+ L K+G   +A  + + +  
Sbjct: 357 TTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTA 416

Query: 354 LKLVPDSYTFCSLLSTVCLSGRFSL---LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQ 410
             L PD  TF +L+   C  G       + + +    +E D V + AL+S  C+ G  + 
Sbjct: 417 SGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHD 476

Query: 411 AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
           A ++   ML  GF PD+ ++                                   T ++D
Sbjct: 477 AGRMLTDMLSAGFKPDDPTY-----------------------------------TMVID 501

Query: 471 RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
              + G      +L +    + +   VV+Y   + GL + G+ + A +L   M ++ V P
Sbjct: 502 CFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAP 561

Query: 531 NAYTYRVML 539
           N  TY ++L
Sbjct: 562 NDITYNILL 570



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 95/354 (26%), Positives = 160/354 (45%), Gaps = 48/354 (13%)

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           + VL+ GF +   +  A  +++++ + G  P VV++ +LI G  ++      F    ++E
Sbjct: 251 FNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGVME 310

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
           SEG  PD+   + LI+ L K G  D+   ++D +    LVP+  TF +L+   C  G+  
Sbjct: 311 SEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVD 370

Query: 378 LLPK---LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
           L  K   ++    V  DLV YNAL++  CK G   +A +L N M   G  PD  +F  L+
Sbjct: 371 LALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLI 430

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            G C                                   + G    A+++ RR + E   
Sbjct: 431 DGCC-----------------------------------KDGDMESALEIKRRMVEEGIE 455

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
           LD V++T  I GL   GR  +A  + + M      P+  TY +++  FCK+ ++KM  +L
Sbjct: 456 LDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKL 515

Query: 555 LQDVIDARIELDYH-----TSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           L++     ++ D H     T   L   + K     +A   L  M N+G+ P+++
Sbjct: 516 LKE-----MQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDI 564



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 114/230 (49%), Gaps = 4/230 (1%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIK----VLKETQLPNFLSFNIALCNLCK 197
           FDEM   G  PN      ++D   K G+VDL +K    +L +   P+ +++N  +  LCK
Sbjct: 341 FDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCK 400

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
           + D+   + ++  M   G  P+   F  L++  CK G +  A ++   M+  G  L   A
Sbjct: 401 VGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVA 460

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T LI G  R  R+  AG +   M+  G  P+  TYT +I  F +     + F  L  ++
Sbjct: 461 FTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQ 520

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
           S+GH P +V +N L++ L K G   +A  + D +L + + P+  T+  LL
Sbjct: 521 SDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILL 570



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 53/248 (21%), Positives = 93/248 (37%), Gaps = 37/248 (14%)

Query: 393 VVYNALLSYFCKAGFPNQAVK-------------------------------------LY 415
           +V++AL+S +  +GF   AV+                                     LY
Sbjct: 177 LVFDALISAYVDSGFTPDAVQCFRLVTKNKFPVPIRGCENLLRRVVRLRPVEIERSWALY 236

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
             +LD G+ P  Y F  L+ G C A  +  A  V+  I              ++    ++
Sbjct: 237 LEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKS 296

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
           G   +  +L      E    DV +++  I GL + GR +E  +L+ +M    + PN  T+
Sbjct: 297 GDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTF 356

Query: 536 RVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCN 595
             ++   CK   + +  +  Q ++   +  D  T   L   + K      A   + EM  
Sbjct: 357 TTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTA 416

Query: 596 LGLIPDEM 603
            GL PD++
Sbjct: 417 SGLKPDKI 424



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 11/112 (9%)

Query: 127 RIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----L 182
           R++  G M   +L A       GF P+     +V+D   K G V +G K+LKE Q    +
Sbjct: 473 RVHDAGRMLTDMLSA-------GFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHV 525

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
           P  +++N  +  LCK   + N K ++  M+  G  PN   + ILL+   K G
Sbjct: 526 PGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHG 577


>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/412 (26%), Positives = 201/412 (48%), Gaps = 16/412 (3%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKI---GRVDLGIKVLKETQLP-NFLSFNIALCNL 195
           EAF   G +GF  +  + N ++  L K    G ++   + + + ++  N +SFNI +  L
Sbjct: 106 EAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGL 165

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ---LLGLMITLGTS 252
           CK+  ++   DVI  M   G  PNV  +  L++ +CKMGRI + Y+   +L  M+  G  
Sbjct: 166 CKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGIC 225

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
            +   + +LIDGF +   +  A  ++ +M + G  PNVVTY  LI G         A + 
Sbjct: 226 PNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVAL 285

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
            D + S    P++V HNVLI+   K  + ++A+++++ + +  + P++ T+ +L+   C 
Sbjct: 286 RDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCK 345

Query: 373 SGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
            GR      L  ++    +  ++  YN L++  C+ G    A  L N M+ K  + D  +
Sbjct: 346 DGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVT 405

Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMN--NPAVNAHV-HTAIVDRLIEAGRCHKAIQLFR 486
           +  L+  LC   +  +A+ +   +     NP   +HV +  ++D     G    A+ +  
Sbjct: 406 YNILIDSLCKKGESRKAVKLLDEMFEKGLNP---SHVTYNTLMDGYCREGNLRAALIVRT 462

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
           R   +    +VV++ V I+G    GR E+A  L ++M    + PN  TY ++
Sbjct: 463 RMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEII 514



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 132/582 (22%), Positives = 251/582 (43%), Gaps = 73/582 (12%)

Query: 57  LLNCPSD-LIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGC 115
           LLN  +D  + L +F W  K+    H ++           LT R      I+  LA    
Sbjct: 5   LLNSGADPELILRYFTWSQKEFKLSHSLE-----------LTFR------ILNSLAHTKK 47

Query: 116 VIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIK 175
             K ++FL     Y +      +  A    G   F  N+   ++++    +  ++  G +
Sbjct: 48  YSKIRSFLDKFVKYEKDYSVSAIFHAISMSGD-SFCVNSILADMLVLAFVRNLKILRGFE 106

Query: 176 VLKETQLPNF----LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFC 231
             K      F    +S N  L  L K ++  +++ V   M+++    NV  F I++N  C
Sbjct: 107 AFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLC 166

Query: 232 KMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM---AGYLWEKMVQNGCSP 288
           K+G++  A  ++  M   G S +V  +  LIDG+ ++ R+     A  + ++MV  G  P
Sbjct: 167 KVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICP 226

Query: 289 NVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVY 348
           N VTY  LI GF + +  S A      ++ +G  P++V +N+LI+ L   G  D+A+ + 
Sbjct: 227 NEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALR 286

Query: 349 DGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFP 408
           D ++   L P+                                +V +N L++ FCK    
Sbjct: 287 DQMVSSDLEPN--------------------------------VVTHNVLINGFCKNKTV 314

Query: 409 NQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAI 468
           N+A+ L+N M  +G  P+  ++  L+   C   ++++A  +Y  ++          +  +
Sbjct: 315 NEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCL 374

Query: 469 VDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAV 528
           +  L   G    A  L    + +K   DVV+Y + I  L + G + +A  L  +M    +
Sbjct: 375 IAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGL 434

Query: 529 PPNAYTYRVMLLSFCKERNIK--MVKRLLQDVIDARIELDYHTSIRLTKFIFK--FHSSS 584
            P+  TY  ++  +C+E N++  ++ R   +    +  +  H ++ +  F  K     ++
Sbjct: 435 NPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTH-NVLIKGFCLKGRLEDAN 493

Query: 585 SAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTPVSLFDGFVP 626
             +N+++E    GL+P+    +  ++ +E M       GFVP
Sbjct: 494 GLLNEMLER---GLVPNRTTYE--IIKEEMMEK-----GFVP 525


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/460 (24%), Positives = 212/460 (46%), Gaps = 29/460 (6%)

Query: 124 LFLRIYWRGEMYGMVLEAFDEMGRFGFTPN---TFARNIVMDVLFKIGRVDLGIKVLKET 180
           L +R + R +M       ++E+      P+   T  RNI++DVLF+ GRVD  + +L E 
Sbjct: 164 LLIRCFGRAQMVDESFLVYNEL-----CPSRRLTHIRNILIDVLFRKGRVDDALHLLDEM 218

Query: 181 QL------PNFLSFNIALCNLCKLNDVSNVKD---VIGMMVR---KGFYPNVRMFEILLN 228
                   PN  + +I    L K + V    D   ++G++ +      +PN      L++
Sbjct: 219 LQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLIS 278

Query: 229 CFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSP 288
             C+ GR   A+ +L  ++ LG  +   +   L+    R R       L  +M +    P
Sbjct: 279 RLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQP 338

Query: 289 NVVTYTSLIKGFMEAKMFSIAFSFLDML---ESEGH--APDLVFHNVLIDCLSKMGSYDD 343
           NVVT+  LI    + +    A    + +   ES G    PD++ +N LID L K+G  ++
Sbjct: 339 NVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEE 398

Query: 344 ALDVYDGLL-ELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALL 399
            L + + +  + + +P++ T+  L+   C +       +L   +    V  ++V  N L+
Sbjct: 399 GLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLV 458

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
              CK G  N AV+ +N M  KG   +  ++  L+R  C    I++A+ ++  ++    +
Sbjct: 459 DGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCS 518

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            +A V+  ++  L +AG+  +A  +  +     +  D+VS+ V I G     + +EAY +
Sbjct: 519 PDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEM 578

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
             +M++  + P+  TY  ++  F K  +     RL++ ++
Sbjct: 579 LKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMV 618



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/429 (23%), Positives = 191/429 (44%), Gaps = 14/429 (3%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGR-----FGFTPN 153
            F+ +  ++ E+  +       TF + +    +       LE F++M       F   P+
Sbjct: 320 EFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPD 379

Query: 154 TFARNIVMDVLFKIGRVDLGIKVLKETQ-----LPNFLSFNIALCNLCKLNDVSNVKDVI 208
               N ++D L K+GR + G+ +++  +     +PN +++N  +   CK + +   +++ 
Sbjct: 380 VITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELF 439

Query: 209 GMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRL 268
             M + G  PNV     L++  CK GRI  A +    M   G   +   +T LI  F  +
Sbjct: 440 DQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNV 499

Query: 269 RRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH 328
             ++ A  L+++M++ GCSP+ + Y +LI G  +A     A   L  ++  G +PD+V  
Sbjct: 500 NNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSF 559

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV 388
           NVLI+   +    D+A ++   +    + PD  T+ +L+S    +G FS   +L+  +  
Sbjct: 560 NVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVK 619

Query: 389 EA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG-LLRGLCGARKID 444
           E     +V Y AL+  +C  G  ++A+K++  M      P N      L+  LC   ++D
Sbjct: 620 EGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVD 679

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
            A+++   + +     N +   A+   L E     KA +L  R        D ++  +  
Sbjct: 680 LALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILT 739

Query: 505 RGLLEGGRT 513
             L   G T
Sbjct: 740 EWLSAVGET 748



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 108/469 (23%), Positives = 204/469 (43%), Gaps = 22/469 (4%)

Query: 89  MISVVTRL--TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMG 146
           +  +++RL  +GR +    ++  L ++G V++A +    L    R   +  +     EM 
Sbjct: 273 LTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMK 332

Query: 147 RFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ---------LPNFLSFNIALCNLCK 197
                PN     I+++ L K  RVD  ++V ++            P+ +++N  +  LCK
Sbjct: 333 EMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCK 392

Query: 198 LNDVSNVKDVIGMMVR----KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
              V   ++ +G++ R        PN   +  L++ +CK   I  A +L   M   G   
Sbjct: 393 ---VGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPP 449

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
           +V     L+DG  +  R++ A   + +M   G   N VTYT+LI+ F        A    
Sbjct: 450 NVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELF 509

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           D +   G +PD + +  LI  LS+ G  D A  V   + E    PD  +F  L++  C  
Sbjct: 510 DEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRK 569

Query: 374 GRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
            +     +++  +E   ++ D V YN L+S+F K G  + A +L   M+ +G  P   ++
Sbjct: 570 NKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTY 629

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNP-AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
             L+   C    +DEA+ +++ +   +    N  ++  +++ L    +   A+ L     
Sbjct: 630 GALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMK 689

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
           V+    +  ++    +GL E     +A+ L  +M   A  P+  T  ++
Sbjct: 690 VKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEIL 738



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 92/372 (24%), Positives = 155/372 (41%), Gaps = 31/372 (8%)

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS--LIKGFMEAKMFSIAF 310
           LSVNA T+LI  F R + +D +  ++ ++    C    +T+    LI           A 
Sbjct: 157 LSVNAATLLIRCFGRAQMVDESFLVYNEL----CPSRRLTHIRNILIDVLFRKGRVDDAL 212

Query: 311 SFLD-MLESEGH-APDLVFHNVLIDCLSKMGSYDDALDVYD--GLL----ELKLVPDSYT 362
             LD ML+ +    P+    +++   LSK      A+D  +  GL+    E ++ P+S  
Sbjct: 213 HLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSIW 272

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGLE-----VEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
              L+S +C SGR      ++ GL      +EA     NALL+   +A    +   L   
Sbjct: 273 LTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEA--ASCNALLTALGRAREFKRMNTLLAE 330

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV-------HTAIVD 470
           M +    P+  +F  L+  LC  R++DEA+ V++   MN    N  +       +  ++D
Sbjct: 331 MKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEK--MNGGESNGFLVEPDVITYNTLID 388

Query: 471 RLIEAGRCHKAIQLFRRAIVEKYPL-DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
            L + GR  + + L  R   +   + + V+Y   I G  +    E A  L+ QM    VP
Sbjct: 389 GLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVP 448

Query: 530 PNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQ 589
           PN  T   ++   CK   I        ++    ++ +  T   L +     ++   A+  
Sbjct: 449 PNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMEL 508

Query: 590 LVEMCNLGLIPD 601
             EM   G  PD
Sbjct: 509 FDEMLEAGCSPD 520



 Score = 43.1 bits (100), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 36/162 (22%), Positives = 72/162 (44%), Gaps = 6/162 (3%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D  +++ +IS  ++ TG F T   ++ ++ + G V    T+   +  Y         ++ 
Sbjct: 590 DGVTYNTLISHFSK-TGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKI 648

Query: 142 FDEMGRFG-FTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLC 196
           F +M       PNT   NI+++ L +  +VDL + ++ + ++    PN  +FN     L 
Sbjct: 649 FRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQ 708

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAE 238
           + N +S   +++  M      P+    EIL      +G  A+
Sbjct: 709 EKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGETAK 750


>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Vitis vinifera]
 gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 129/533 (24%), Positives = 234/533 (43%), Gaps = 45/533 (8%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFL-L 124
           A SFF   A+     H  ++ ++++ ++ R   R E +  +   + +        T+L +
Sbjct: 105 AFSFFNSVAEMPRVIHTTETCNYVLEML-RAHRRVEDMVVVFNLMQKQIIKRSINTYLTI 163

Query: 125 FLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ET 180
           F  +Y RG +    + A ++M + GF  N ++   ++ +L K G     +KV +    E 
Sbjct: 164 FKVLYIRGGLREAPV-ALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEG 222

Query: 181 QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAY 240
             P+  +++  +  L K  D+  V  ++  M   G  PN+  F I +    + G+I EAY
Sbjct: 223 IKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAY 282

Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
            +L  M   G    V  +TVLID      +L+ A  L+ KM  +   P+ VTY +L+  F
Sbjct: 283 GILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKF 342

Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
            +         F   +E++G+ PD+V   +LID L K+G  D+A    D + +  + P+ 
Sbjct: 343 SDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNL 402

Query: 361 YTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
           +T+ +L+  +    R     +L   +E   +E     Y   + Y+ K+G   +A+K +  
Sbjct: 403 HTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEK 462

Query: 418 M----------------------------------LDK-GFTPDNYSFVGLLRGLCGARK 442
           M                                  L K G  PD  ++  L+R    A +
Sbjct: 463 MKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGR 522

Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTV 502
           +D+AI +   +  N       +  +++D L +A R  +A ++F+R    K    VV+Y  
Sbjct: 523 VDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNT 582

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
            + GL + GR +EA  L+  M     PPN  ++  +L   CK   + +  ++L
Sbjct: 583 LLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKML 635



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 134/616 (21%), Positives = 249/616 (40%), Gaps = 59/616 (9%)

Query: 35  KVCATTHQDFPIILAPHIVHSTLLNCPSD---LIALSFFIWCAKQRD-YFHDVQSFDHMI 90
           K+ A++H+         + + TLL+  SD   L A+  F W   + D Y  DV +F  +I
Sbjct: 322 KMKASSHK------PDRVTYITLLDKFSDHGDLDAIKEF-WSEMEADGYLPDVVTFTILI 374

Query: 91  SVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGF 150
             + ++ G+ +   G +  + + G      T+   +    R       LE F+ M   G 
Sbjct: 375 DALCKV-GKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGL 433

Query: 151 TPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKD 206
               +   + +D   K G     IK  ++ +    +PN ++ N +L +L +   +   K+
Sbjct: 434 ETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKE 493

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
               + + G  P+   + IL+ C+ K GR+ +A +LL  M   G    V     LID   
Sbjct: 494 FFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLY 553

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
           +  R+D A  ++++M +   +P VVTY +L+ G  +      A +    + ++   P+ +
Sbjct: 554 KADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTI 613

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF----------------------- 363
             N L+DCL K G  D AL +   + E+   PD  T+                       
Sbjct: 614 SFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQM 673

Query: 364 -----------CSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFP 408
                      C+LL  V   GR    F +  + V  +   AD   +  L+         
Sbjct: 674 KKVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEI 733

Query: 409 NQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN---NPAVNAHVH 465
            Q++    +++      D+   + L++ LC   K  +A NV+  +  +    P++ A  +
Sbjct: 734 GQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEA--Y 791

Query: 466 TAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKH 525
            +++D L++A     A  LF +        DV +Y + +  L + G+ +E + LY +M  
Sbjct: 792 NSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLF 851

Query: 526 IAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSS 585
               PN  T+ +++    K  ++     L  D++         T   L   + K      
Sbjct: 852 RGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEE 911

Query: 586 AVNQLVEMCNLGLIPD 601
           A     EM + G +P+
Sbjct: 912 AKQFFEEMLDYGCMPN 927



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 150/318 (47%), Gaps = 4/318 (1%)

Query: 226  LLNCFCKMGRIAEAYQL-LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN 284
            L+   CK G+  +AY + L L  +   + S+ A+  LIDG  + R  +MA  L+ KM   
Sbjct: 758  LVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNA 817

Query: 285  GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
            GC+P+V TY   +    ++      F   + +   G  P+ + HN++I  L K  S D A
Sbjct: 818  GCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKA 877

Query: 345  LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSY 401
            +D+Y  L+     P  +T+  L+  +   GR     +    +       +  +YN L++ 
Sbjct: 878  IDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNG 937

Query: 402  FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVN 461
            F K G    A +L+  M+ +G  PD  S+  ++  LC   K+D+A++ ++ + ++    +
Sbjct: 938  FGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPD 997

Query: 462  AHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYS 521
               +  +++ L  + R  +A+ LF          D+ +Y   I  L   G  EEA  +Y 
Sbjct: 998  LVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYE 1057

Query: 522  QMKHIAVPPNAYTYRVML 539
            +++   + PN +TY  ++
Sbjct: 1058 ELQLKGLEPNVFTYNALI 1075



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 79/310 (25%), Positives = 152/310 (49%), Gaps = 7/310 (2%)

Query: 131  RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFL 186
            +  +  M    F +M   G TP+ F  N+ +D L K G++    DL  ++L     PN +
Sbjct: 800  KARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTI 859

Query: 187  SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
            + NI +  L K N +    D+   ++   F P    +  L++   K+GR+ EA Q    M
Sbjct: 860  THNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEM 919

Query: 247  ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
            +  G   +   + +L++GF +   ++ A  L+ +MV+ G  P++ +Y+ ++         
Sbjct: 920  LDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKV 979

Query: 307  SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
              A  + + L+  G  PDLV +N++I+ L +    ++AL ++D +    + PD YT+ +L
Sbjct: 980  DDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNAL 1039

Query: 367  LSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
            +  + ++G      K+   L+   +E ++  YNAL+     +G P++A  +Y  M+  G 
Sbjct: 1040 ILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGC 1099

Query: 424  TPDNYSFVGL 433
             P+  +F  L
Sbjct: 1100 RPNTGTFAQL 1109



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 100/460 (21%), Positives = 203/460 (44%), Gaps = 76/460 (16%)

Query: 152  PNTFARNIVMDVLFKIGRVDLGIKVL-KETQL---PNFLSFNIALCNLCKLNDVSNVKDV 207
            PNT + N ++D L K G VDL +K+L + T++   P+ L++N  +  L K N V+    +
Sbjct: 610  PNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWL 669

Query: 208  IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL------------------------- 242
               M +K  YP+      LL    K GRI +A+++                         
Sbjct: 670  FHQM-KKVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGIL 728

Query: 243  ----LGLMITLGTSLSVNAW----TVLIDGFRRL----RRLDMAGYLWEKMVQNGC-SPN 289
                +G  I    SL  N      +VLI   + L    + +D A  ++ K+ ++ C +P+
Sbjct: 729  IEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVD-AYNVFLKLTKSFCITPS 787

Query: 290  VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
            +  Y SLI G ++A++  +A+     +++ G  PD+  +N+ +D L K G   +  D+Y+
Sbjct: 788  LEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYE 847

Query: 350  GLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPN 409
             +L     P++ T                                +N ++    K+   +
Sbjct: 848  EMLFRGCKPNTIT--------------------------------HNIVIFGLVKSNSLD 875

Query: 410  QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
            +A+ LY  ++   F+P  +++  L+ GL    +++EA   ++ ++      N  ++  ++
Sbjct: 876  KAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILM 935

Query: 470  DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
            +   + G    A +LFRR + E    D+ SY++ +  L   G+ ++A   + ++K   + 
Sbjct: 936  NGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLD 995

Query: 530  PNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
            P+   Y +M+    + + ++    L  ++ +  I  D +T
Sbjct: 996  PDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYT 1035



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/315 (24%), Positives = 132/315 (41%), Gaps = 67/315 (21%)

Query: 211  MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT------------------- 251
            M   G  P+V  + + L+   K G+I E + L   M+  G                    
Sbjct: 814  MKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNS 873

Query: 252  --------------SLSVNAWTV--LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
                            S   WT   LIDG  +L RL+ A   +E+M+  GC PN   Y  
Sbjct: 874  LDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNI 933

Query: 296  LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
            L+ GF +      A      +  EG  PDL  +++++DCL  +G  DDAL  ++   ELK
Sbjct: 934  LMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFE---ELK 990

Query: 356  LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLY 415
                            LSG             ++ DLV YN +++   ++    +A+ L+
Sbjct: 991  ----------------LSG-------------LDPDLVCYNLMINGLGRSQRVEEALSLF 1021

Query: 416  NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
            + M ++G TPD Y++  L+  L  A  ++EA  +Y+ + +     N   + A++     +
Sbjct: 1022 DEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMS 1081

Query: 476  GRCHKAIQLFRRAIV 490
            G   +A  ++++ +V
Sbjct: 1082 GNPDRAYAVYKKMMV 1096



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/235 (22%), Positives = 100/235 (42%), Gaps = 14/235 (5%)

Query: 75   KQRDYFHDVQSFDH---------MISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
            K  D ++D+ S D          +I  + +L GR E  +    E+   GC+     + + 
Sbjct: 876  KAIDLYYDLMSGDFSPTPWTYGPLIDGLLKL-GRLEEAKQFFEEMLDYGCMPNCPLYNIL 934

Query: 126  LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL--- 182
            +  + +        E F  M + G  P+  + +I++D L  +G+VD  +   +E +L   
Sbjct: 935  MNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGL 994

Query: 183  -PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
             P+ + +N+ +  L +   V     +   M  +G  P++  +  L+      G + EA +
Sbjct: 995  DPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGK 1054

Query: 242  LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSL 296
            +   +   G   +V  +  LI G       D A  +++KM+  GC PN  T+  L
Sbjct: 1055 MYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109


>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
 gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
          Length = 820

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/433 (23%), Positives = 194/433 (44%), Gaps = 3/433 (0%)

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
           + R G    A TF   +  Y R +   +  + FD+M   GF+ +  +   +++   + GR
Sbjct: 155 MVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGR 214

Query: 170 VDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
           VD  +++ +E + P+  +    +  LC          ++  M   G+ P  R +  L++ 
Sbjct: 215 VDEALELFRELEQPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDL 274

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
           +C+  +  EA ++L  M   G        T +++ + R  R+  A  ++E M   GC PN
Sbjct: 275 WCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPN 334

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
           V TY ++++GF        A + LD +   G  PD+V +N+LI      G  + A  +  
Sbjct: 335 VWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLR 394

Query: 350 GLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAG 406
            +    L  D YT+  L+  +C +G+      L  GLE   +  + V +N +++  CK G
Sbjct: 395 LMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGG 454

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
             + A      M+  G  PD Y++   +  LC  +   E ++    ++  +   +   +T
Sbjct: 455 KFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYT 514

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
            ++DRL +      A +++ + +      DVV+YT ++R     GR  EA  +  +MK  
Sbjct: 515 IVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKG 574

Query: 527 AVPPNAYTYRVML 539
            +  +A  Y  ++
Sbjct: 575 GIIVDAMAYNTLI 587



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/422 (22%), Positives = 193/422 (45%), Gaps = 7/422 (1%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P   ++N  +  LC+  D+ + +  + +MVR G+ P+   F  L+  +C+  ++  A  L
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDL 186

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
              M   G S    ++  LI+GF    R+D A  L+ ++ Q    P++ T+ +L+KG  +
Sbjct: 187 FDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQ----PDMYTHAALVKGLCD 242

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
           A+        L  ++  G  P    +  L+D   +    ++A  + + + +  LVP + T
Sbjct: 243 ARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVT 302

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGLEV---EADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
             ++++  C  GR S   ++   +++   E ++  YNA++  FC  G   +A+ L + M 
Sbjct: 303 CTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMR 362

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
           + G  PD  ++  L+RG C    I+ A  + + +  N  A + + +  ++D L + G+  
Sbjct: 363 ECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVD 422

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
           +A  LF          + V++   I GL +GG+ + A     +M      P+ YTY   +
Sbjct: 423 EACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFI 482

Query: 540 LSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLI 599
            + CK +  +     + +++   ++        +   +FK  +   A     +M +LG  
Sbjct: 483 ENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCS 542

Query: 600 PD 601
           PD
Sbjct: 543 PD 544



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 109/500 (21%), Positives = 206/500 (41%), Gaps = 35/500 (7%)

Query: 78  DYFHDVQSFDHMISVVTRLTGRFETVRGIVG-----ELARVGCVIKAQTFLLFLRIYWRG 132
           + F +++  D M +    + G  +  RG  G     ++  +G     + +   + ++ R 
Sbjct: 220 ELFRELEQPD-MYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCRE 278

Query: 133 EMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSF 188
           +      +  +EM   G  P       V++   + GR+   ++V +  +L    PN  ++
Sbjct: 279 QKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTY 338

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           N  +   C +  V     ++  M   G  P+V  + +L+   C  G I  A++LL LM  
Sbjct: 339 NAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEG 398

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
            G +     + VLID   +  ++D A  L++ +   G  PN VT+ ++I G  +   F +
Sbjct: 399 NGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDV 458

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A +FL+ + S G APD   ++  I+ L K     + L   D +L+  + P +  +  ++ 
Sbjct: 459 ACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVID 518

Query: 369 TVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
            +     + L  ++   +  L    D+V Y   +  +C  G  ++A  +   M   G   
Sbjct: 519 RLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIV 578

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGI--VMNNP-----------------AVNAHVHT 466
           D  ++  L+ G     K D A+ + + +  V + P                 A +  + T
Sbjct: 579 DAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKT 638

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
             V + IE     +  +L ++  V   P    +Y   + G  E  R +E   L S MK  
Sbjct: 639 TSVWKTIELADVFELFELMKKNSV---PSSARAYLAILEGFSEERRLDEVTSLVSHMKED 695

Query: 527 AVPPNAYTYRVMLLSFCKER 546
            +P N   Y  ++  FCK R
Sbjct: 696 DLPLNEDIYTSLVNCFCKLR 715



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 102/482 (21%), Positives = 199/482 (41%), Gaps = 25/482 (5%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWR-GEMYGMVLEAFDEMGRFGFTPNTFAR 157
           + E    ++ E+   G V  A T    +  Y R G M G V   F+ M   G  PN +  
Sbjct: 280 KAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAV-RVFESMKLKGCEPNVWTY 338

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N ++     +G+V   + +L + +     P+ +++N+ +   C    + +   ++ +M  
Sbjct: 339 NAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEG 398

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G   +   + +L++  CK G++ EA  L   +   G   +   +  +I+G  +  + D+
Sbjct: 399 NGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDV 458

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A    EKMV  GC+P+  TY+  I+   + K      SF+D +  +   P  V + ++ID
Sbjct: 459 ACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVID 518

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEA 390
            L K  +Y  A  ++  ++ L   PD  T+ + +   C  GR      +V  ++   +  
Sbjct: 519 RLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIV 578

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL--------------LRG 436
           D + YN L+      G  + AV +   M      P++++F  L              L+ 
Sbjct: 579 DAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKT 638

Query: 437 LCGARKID--EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
               + I+  +   +++ +  N+   +A  + AI++   E  R  +   L      +  P
Sbjct: 639 TSVWKTIELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLP 698

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
           L+   YT  +    +     +A+ L   M      PN  +Y+ +L  F  E      K +
Sbjct: 699 LNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEI 758

Query: 555 LQ 556
            +
Sbjct: 759 FR 760



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/414 (20%), Positives = 172/414 (41%), Gaps = 25/414 (6%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNV 204
           G   + +  N+++D L K G+VD    +    +     PN ++FN  +  LCK       
Sbjct: 400 GLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVA 459

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
              +  MV  G  P+   +   +   CK     E    +  M+      S   +T++ID 
Sbjct: 460 CTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDR 519

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
             + R   +A  +W +MV  GCSP+VVTYT+ ++ +        A + +  ++  G   D
Sbjct: 520 LFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVD 579

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF--------------------C 364
            + +N LID  + +G  D A+ +   +  +  +P+ +TF                     
Sbjct: 580 AMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTT 639

Query: 365 SLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
           S+  T+ L+  F L  +L+    V +    Y A+L  F +    ++   L + M +    
Sbjct: 640 SVWKTIELADVFELF-ELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLP 698

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
            +   +  L+   C  R   +A  +   ++ +    N   +  ++      G+  +A ++
Sbjct: 699 LNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEI 758

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
           FR    ++Y  D + + + I GL+  G  +  + + S ++ +   P+  TY ++
Sbjct: 759 FRGLRWKEYNTDEIVWKIIIDGLIRQGHPDMCHDMISILEQMKCKPSDETYAML 812



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/297 (23%), Positives = 129/297 (43%), Gaps = 2/297 (0%)

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGC-SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
           L+  F R     +   L+  M  +G  +P   TY +LI+          A  +L ++   
Sbjct: 99  LLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRS 158

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
           G  PD    N LI    +    D A D++D +       D+ ++ +L+   C +GR    
Sbjct: 159 GWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEA 218

Query: 380 PKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
            +L   LE + D+  + AL+   C A    + + +   M + G+ P   ++  L+   C 
Sbjct: 219 LELFRELE-QPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCR 277

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
            +K +EA  +   +  N     A   TA+V+     GR   A+++F    ++    +V +
Sbjct: 278 EQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWT 337

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
           Y   ++G    G+  +A  L  QM+   V P+  TY +++   C + +I+   RLL+
Sbjct: 338 YNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLR 394



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 58/250 (23%), Positives = 101/250 (40%), Gaps = 23/250 (9%)

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           I G++  +GC     T+   +R Y              EM + G   +  A N ++D   
Sbjct: 532 IWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHT 591

Query: 166 KIGRVDLGIKVLKE----TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
            IG+ D  + +LK       +PN  +F I L +L +     +V                 
Sbjct: 592 SIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVP---------------- 635

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
              +      K   +A+ ++L  LM       S  A+  +++GF   RRLD    L   M
Sbjct: 636 ---LKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHM 692

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
            ++    N   YTSL+  F + +M+  A++ L  +   G  P+L+ +  L+   +  G  
Sbjct: 693 KEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQA 752

Query: 342 DDALDVYDGL 351
           D A +++ GL
Sbjct: 753 DRAKEIFRGL 762


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 137/585 (23%), Positives = 238/585 (40%), Gaps = 29/585 (4%)

Query: 44  FPIILAPHIVHSTLLN-CPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFET 102
           F   LAP      L+  C    +AL FF W   +  + H  +++  ++ ++     RF +
Sbjct: 92  FDSALAPIWASRVLVELCQDARLALRFFEWAKGRIGFQHTSEAYCILVHIL--FCARFYS 149

Query: 103 -VRGIVGEL------------------ARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFD 143
               ++ EL                   R  CV     F           M     E F 
Sbjct: 150 DANAVLKELICLRRVLPSWDVFDLLWATRNVCVPGFGVFDALFSALIELGMLEEASECFL 209

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP----NFLSFNIALCNLCKLN 199
           +M +F   P   + N ++  L K+GR DL  K  K+        +  ++NI +  LCK  
Sbjct: 210 KMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEG 269

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
           D+   + +   M   GF P++  +  L++   K+G + E   +   M        V  + 
Sbjct: 270 DLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYN 329

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
            LI+ F +  R+  A     +M  NG  PNVVTY++ I  F +  M   A  F   +   
Sbjct: 330 ALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRV 389

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
              P+   +  LID   K G+  +AL + + +L+  +  +  T+ +LL  +C  GR    
Sbjct: 390 ALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEA 449

Query: 380 PKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
            ++   +    V  +   Y AL+  F KA     A  +   M +K   PD   +  +L G
Sbjct: 450 EEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWG 509

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
           LC   +++EA  +   I  +    NA ++T ++D   ++G+  +A+ L    +       
Sbjct: 510 LCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIAT 569

Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
            V+Y   I GL + G  +EA   + +M  I + PN   Y  ++   CK    ++ K+L  
Sbjct: 570 EVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFD 629

Query: 557 DVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           +++D  +  D      L     K  +   A+N    M  +G+  D
Sbjct: 630 EMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELD 674



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 118/509 (23%), Positives = 218/509 (42%), Gaps = 7/509 (1%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR +  R    ++   G      T+ + +    +     M    F +M   GFTP+    
Sbjct: 234 GRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTY 293

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N ++D   K+G +D  I + ++ +     P+ +++N  +   CK   +    + +  M  
Sbjct: 294 NSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKA 353

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G  PNV  +   ++ FCK G + EA +    M  +  + +   +T LID   +   L  
Sbjct: 354 NGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAE 413

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L E+++Q G   NVVTYT+L+ G  E      A      + + G AP+   +  L+ 
Sbjct: 414 ALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVH 473

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEA 390
              K    + A D+   + E  + PD   + ++L  +C   R      L+  ++   +  
Sbjct: 474 GFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINT 533

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           + V+Y  L+  + K+G   +A+ L   MLD G      ++  L+ GLC +  + EA++ +
Sbjct: 534 NAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHF 593

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
             +       N  V+TA+VD L +      A +LF   + +    D ++YT  I G ++ 
Sbjct: 594 GRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKH 653

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
           G  +EA  L  +M  I +  + + Y  ++        ++  + LL ++I   +  D    
Sbjct: 654 GNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVY 713

Query: 571 IRLTKFIFKFHSSSSAVNQLVEMCNLGLI 599
           + L K  +       A+    EM   G+I
Sbjct: 714 MCLIKKYYALGKVDEALELQNEMAKRGMI 742



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 145/612 (23%), Positives = 257/612 (41%), Gaps = 61/612 (9%)

Query: 7   RSLFYTAQRTQILKTIISFKSIHQISSPKVCATTHQDFPIILAPHIVHSTLLNCPSDLIA 66
           RSLF   +RT    T  S        +P   + T    P +++P I     L+C   LI 
Sbjct: 6   RSLFGIGRRTSHRLTAFS-------HNPNHISNTCSSSPSLVSPFI----WLSCFICLIR 54

Query: 67  LSFFIWCAKQRDYFHDVQSFDH-MISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
             F         +FH+   FD   +  + R   R++  R IV         I A   L+ 
Sbjct: 55  FPFV-----SNRHFHNFDCFDKDSVREIVR-EQRWDDFR-IVSLFDSALAPIWASRVLVE 107

Query: 126 LRIYWRGEMYGMVLEAFD-EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE----- 179
           L    R     + L  F+   GR GF   + A  I++ +LF          VLKE     
Sbjct: 108 LCQDAR-----LALRFFEWAKGRIGFQHTSEAYCILVHILFCARFYSDANAVLKELICLR 162

Query: 180 TQLPNFLSFNI--ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIA 237
             LP++  F++  A  N+C                     P   +F+ L +   ++G + 
Sbjct: 163 RVLPSWDVFDLLWATRNVC--------------------VPGFGVFDALFSALIELGMLE 202

Query: 238 EAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLI 297
           EA +    M          +   L+    ++ R D++   ++ M   G   +V TY  +I
Sbjct: 203 EASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMI 262

Query: 298 KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
               +     +A S    ++  G  PD+V +N LID   K+G  D+ + +++ + +    
Sbjct: 263 DYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCD 322

Query: 358 PDSYTFCSLLSTVCLSGRFSLLPKLVCGLE------VEADLVVYNALLSYFCKAGFPNQA 411
           PD  T+ +L++  C   +F  +PK    L       ++ ++V Y+  +  FCK G   +A
Sbjct: 323 PDVITYNALINCFC---KFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEA 379

Query: 412 VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
           +K +  M     TP+ +++  L+   C A  + EA+ + + I+     +N   +TA++D 
Sbjct: 380 IKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDG 439

Query: 472 LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
           L E GR  +A ++FR  +      +  +YT  + G ++    E A  +  +MK   + P+
Sbjct: 440 LCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPD 499

Query: 532 AYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLV 591
              Y  +L   C E  ++  K L+ ++ ++ I  +      L    FK   ++ A+  L 
Sbjct: 500 LLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLE 559

Query: 592 EMCNLGLIPDEM 603
           EM +LGLI  E+
Sbjct: 560 EMLDLGLIATEV 571



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 105/460 (22%), Positives = 207/460 (45%), Gaps = 16/460 (3%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           K+  +  D+ +++ +I    +L G  +    I  ++    C     T+   +  + + E 
Sbjct: 282 KEAGFTPDIVTYNSLIDGHGKL-GLLDECICIFEQMKDADCDPDVITYNALINCFCKFER 340

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNI 190
                E   EM   G  PN    +  +D   K G +   IK   + +     PN  ++  
Sbjct: 341 MPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTS 400

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +   CK  +++    ++  +++ G   NV  +  LL+  C+ GR+ EA ++   M+  G
Sbjct: 401 LIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAG 460

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
            + +   +T L+ GF + + ++ A  + ++M +    P+++ Y +++ G         A 
Sbjct: 461 VAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAK 520

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
             +  ++  G   + V +  L+D   K G   +AL + + +L+L L+    T+C+L+  +
Sbjct: 521 LLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGL 580

Query: 371 CLSG-------RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           C SG        F  + ++  GL  + ++ VY AL+   CK      A KL++ MLDKG 
Sbjct: 581 CKSGLVQEAMHHFGRMSEI--GL--QPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGM 636

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
            PD  ++  L+ G      + EA+N+   ++     ++ H +TA++  L  +G+  KA  
Sbjct: 637 MPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARN 696

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM 523
           L    I +    D V Y   I+     G+ +EA  L ++M
Sbjct: 697 LLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEM 736



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 94/236 (39%), Gaps = 4/236 (1%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           R E  + ++GE+   G    A  +   +  Y++       L   +EM   G         
Sbjct: 515 RLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYC 574

Query: 159 IVMDVLFKIGRVDLGIK---VLKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
            ++D L K G V   +     + E  L PN   +   +  LCK N     K +   M+ K
Sbjct: 575 ALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDK 634

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           G  P+   +  L++   K G + EA  L   MI +G  L ++A+T LI G     ++  A
Sbjct: 635 GMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKA 694

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
             L ++M+  G  P+ V Y  LIK +        A    + +   G    L  H V
Sbjct: 695 RNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMITGLSDHAV 750


>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
 gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
          Length = 479

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 120/472 (25%), Positives = 198/472 (41%), Gaps = 34/472 (7%)

Query: 115 CVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI 174
           C   A ++   ++   R            EM R    P+ F  N+V+D L K  R+   I
Sbjct: 31  CKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAI 90

Query: 175 KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
           +  +    P+ +++N  L  LCK   V+    + G M   G  P+   +  L++ FCKM 
Sbjct: 91  EFFETMPEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMC 150

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
           +   AY LL LM +   S +V ++  +I+G  + R++D A  L+E+M   GC P+ VTY 
Sbjct: 151 QFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYN 210

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
           +LI G    +    A   L ++   G  PD +    LI+ L       +A  ++ G+ + 
Sbjct: 211 TLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQ 270

Query: 355 KLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKL 414
              PD  T   L+S +C+      L KL   L V  +   Y A            +AV L
Sbjct: 271 GCAPDLVTHTVLVSKLCI------LRKLRPALSVVRN---YPAC----------PEAVIL 311

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
           Y        TP       + R L   R  D A  + Q +       N   +TA    L +
Sbjct: 312 Y--------TP-------IFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGD 356

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
                +A + FRR + +    D+V+Y V + G  +  R + A  +   M    +PPN  T
Sbjct: 357 WKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVT 416

Query: 535 YRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSA 586
           Y  ++   C++  ++ +  LL  ++    + D  T   L   +F    + +A
Sbjct: 417 YNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFMVGQADAA 468



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/408 (24%), Positives = 181/408 (44%), Gaps = 17/408 (4%)

Query: 158 NIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N ++D+L +  R +  +    ++  +   PN LS+   +  LC+   +      I  M R
Sbjct: 4   NALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAR 63

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +   P+V  + ++++  CK  RI+ A +    M        V  +  L+ G  +  R+  
Sbjct: 64  EKLVPDVFTYNVVIDTLCKARRISRAIEFFETM----PEPDVVTYNTLLGGLCKNGRVAQ 119

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L+  M   G +P+ VTYT+LI  F +   F  A+  L ++ S   +P +  +  +I+
Sbjct: 120 ACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIIN 179

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEA 390
            L K    D A  +++ +      PD  T+ +L+  +C+  R      L+  +     + 
Sbjct: 180 GLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQP 239

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           D + + AL+   C      +A  L+  M  +G  PD  +   L+  LC  RK+  A++V 
Sbjct: 240 DKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSV- 298

Query: 451 QGIVMNNPAVNAHV--HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
              V N PA    V  +T I   L       +A +L ++      P +VV+YT   +GL 
Sbjct: 299 ---VRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLG 355

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
           +      AY  + +M    + P+   Y V++  FCK   + M +++++
Sbjct: 356 DWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVR 403



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 90/212 (42%), Gaps = 6/212 (2%)

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           V  NALL    +A    Q V ++  +  +   P+  S+  L++ LC   KID+A +    
Sbjct: 1   VTCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAE 60

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP-LDVVSYTVAIRGLLEGG 511
           +       +   +  ++D L +A R  +AI+ F     E  P  DVV+Y   + GL + G
Sbjct: 61  MAREKLVPDVFTYNVVIDTLCKARRISRAIEFF-----ETMPEPDVVTYNTLLGGLCKNG 115

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSI 571
           R  +A  L+  M+   + P+  TY  ++  FCK    +    LLQ +   +     ++  
Sbjct: 116 RVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYC 175

Query: 572 RLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
            +   + K      A     EM   G  PD +
Sbjct: 176 SIINGLCKNRKVDQAYQLFEEMKLAGCKPDRV 207



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 57/110 (51%)

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M+ +G  P++  + +L++ FCK  R+  A +++  M   G   ++  +  L+    R  +
Sbjct: 370 MLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGK 429

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           ++  G L   MV  G  P+V T+++L+ G         A+SFL++  S+G
Sbjct: 430 VEAIGELLHTMVSRGRQPDVATWSTLVAGLFMVGQADAAYSFLNLAMSQG 479



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 74/157 (47%), Gaps = 8/157 (5%)

Query: 100 FETVRGIVGELARVGCVIKAQTFLLFLRIY--WRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           F+    ++ ++AR G      T+  F +    W+  M       F  M   G  P+  A 
Sbjct: 325 FDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRA--YREFRRMLEQGIEPDMVAY 382

Query: 158 NIVMDVLFKIGRVDLGIKVLK---ETQLP-NFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N+++D   K  R+D+  K+++   ++ LP N +++N  + + C+   V  + +++  MV 
Sbjct: 383 NVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVS 442

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
           +G  P+V  +  L+     +G+   AY  L L ++ G
Sbjct: 443 RGRQPDVATWSTLVAGLFMVGQADAAYSFLNLAMSQG 479


>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Glycine max]
          Length = 1078

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 124/499 (24%), Positives = 209/499 (41%), Gaps = 32/499 (6%)

Query: 65  IALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGR--------------------FETVR 104
           +AL F  W  KQ +   ++    H+I   T +  R                      +V 
Sbjct: 34  LALKFLNWVIKQPNL--ELNHVTHIICTTTHILVRARMYNFAKTTLKHLLQLPIGLNSVF 91

Query: 105 GIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVL 164
           G + E   + C      F L +R+  R  M G  ++ F  MG  G  P+ +  N+V+  L
Sbjct: 92  GALMETYPI-CNSNPAVFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSL 150

Query: 165 FKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV 220
            K  +VD+     K    +   P+  +FNI L  LC+     N   ++  M   G YP  
Sbjct: 151 VKEQKVDMFWSFFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTA 210

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
             +  LLN +CK GR   A QL+  M + G  + V  + V ID   R  R      L ++
Sbjct: 211 VTYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKR 270

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           M +N   PN +TY +LI GF+      +A    D +      P+ + +N LI      G+
Sbjct: 271 MRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGN 330

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF----SLLPKLVCGLEVEADLVVYN 396
             +AL + D ++   L P+  T+ +LL+ +  +  F    S+L ++  G  V    + Y 
Sbjct: 331 IGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMG-GVRVSHISYT 389

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
           A++   CK G   +AV+L + ML     PD  +F  L+ G     KI+ A  +   +   
Sbjct: 390 AMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKT 449

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
               N  +++ ++    + G   +A+  +       +  D  +  V +      G+ EEA
Sbjct: 450 GLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEA 509

Query: 517 YILYSQMKHIAVPPNAYTY 535
               + M  + + PN+ T+
Sbjct: 510 EYFMNHMSRMGLDPNSVTF 528



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 120/486 (24%), Positives = 217/486 (44%), Gaps = 54/486 (11%)

Query: 90  ISVVTRLTGRFETVRGIVGELARVGCVIKAQ-------TFLLFLRIYWRGEMYGMVLEAF 142
           I+  T + G   T  G +GE  R+  V+ +        T+   L   ++   +GMV    
Sbjct: 316 ITYNTLIAGHCTT--GNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSIL 373

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCKL 198
           + M   G   +  +   ++D L K G ++  +++L    K +  P+ ++F++ +    ++
Sbjct: 374 ERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRV 433

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
             ++N K+++  M + G  PN  ++  L+  +CKMG + EA     +M   G        
Sbjct: 434 GKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTC 493

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
            VL+  F R  +L+ A Y    M + G  PN VT+  +I G+  +     AFS  D + S
Sbjct: 494 NVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNS 553

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL 378
            GH P L  +  L+  L   G  ++AL  +     L+ +P++                  
Sbjct: 554 FGHFPSLFTYGGLLKGLCIGGHINEALKFFH---RLRCIPNA------------------ 592

Query: 379 LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
                       D V++N  L+  C++G  + A+ L N M+   F PDN+++  L+ GLC
Sbjct: 593 -----------VDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLC 641

Query: 439 GARKIDEAI-----NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
              KI  A+      + +G++  NPA    V+T++VD L++ G    A+ +F   + +  
Sbjct: 642 KKGKIVAALLLSGKAIEKGLLSPNPA----VYTSLVDGLLKHGHARAALYIFEEMLNKDV 697

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
             D V++ V I      G+T +   + S MK   +  N  TY ++L  + K   +     
Sbjct: 698 EPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFM 757

Query: 554 LLQDVI 559
           L +D+I
Sbjct: 758 LYKDMI 763



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 102/432 (23%), Positives = 197/432 (45%), Gaps = 14/432 (3%)

Query: 143  DEMGRFGFTPNTFARNIVMDVLFKIGRVDL-----GIKVLKETQLPNFLSFNIALCNLCK 197
            +EM    F P+ F    ++  L K G++       G  + K    PN   +   +  L K
Sbjct: 619  NEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLK 678

Query: 198  LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
                     +   M+ K   P+   F ++++ + + G+ ++   +L  M +     ++  
Sbjct: 679  HGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLAT 738

Query: 258  WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
            + +L+ G+ +   +     L++ M+++G  P+  ++ SLI G+ ++K F +A   L  + 
Sbjct: 739  YNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWIT 798

Query: 318  SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             EGH  D    N+LI    +      A ++   + +  ++P+  T+ +L + +  +  F 
Sbjct: 799  LEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFH 858

Query: 378  LLPKLVCGLEVEADLVVYN----ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
               +++  L +E+  V  N     L++  C+ G    A+KL + M   G +  N +   +
Sbjct: 859  KAHRVLQVL-LESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAI 917

Query: 434  LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE-- 491
            +RGL  ++KI+ AI V   ++           T ++    +     KA++L  R+I+E  
Sbjct: 918  VRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALEL--RSIMEHC 975

Query: 492  KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
               LDVV+Y V I GL   G  E A+ LY +MK   + PN   Y V++ SFC        
Sbjct: 976  HVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSFCAGNYQIES 1035

Query: 552  KRLLQDVIDARI 563
            ++LL+D+ D  +
Sbjct: 1036 EKLLRDIQDREL 1047



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 108/482 (22%), Positives = 203/482 (42%), Gaps = 18/482 (3%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G+ E     +  ++R+G    + TF   +  Y            FD+M  FG  P+ F  
Sbjct: 504 GKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTY 563

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQ-LPNFLS---FNIALCNLCKLNDVSNVKDVIGMMVR 213
             ++  L   G ++  +K     + +PN +    FN  L + C+  ++S+   +I  MV 
Sbjct: 564 GGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVT 623

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN--AWTVLIDGFRRLRRL 271
             F P+   +  L+   CK G+I  A  L G  I  G  LS N   +T L+DG  +    
Sbjct: 624 NDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGL-LSPNPAVYTSLVDGLLKHGHA 682

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
             A Y++E+M+     P+ V +  +I  +      S     L  ++S+    +L  +N+L
Sbjct: 683 RAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNIL 742

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA- 390
           +   +K  +      +Y  ++    +PD +++ SL+   C S  F +  K++  + +E  
Sbjct: 743 LHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGH 802

Query: 391 --DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
             D   +N L++ FC+     +A +L   M      P+  ++  L  GL       +A  
Sbjct: 803 VIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHR 862

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA----I 504
           V Q ++ +        +  +++ +   G    A++L      E   L + S+ VA    +
Sbjct: 863 VLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQD----EMKTLGISSHNVAMSAIV 918

Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
           RGL    + E A  +   M  + + P   T+  ++  +CKE N+     L   +    ++
Sbjct: 919 RGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALELRSIMEHCHVK 978

Query: 565 LD 566
           LD
Sbjct: 979 LD 980



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/346 (23%), Positives = 151/346 (43%), Gaps = 7/346 (2%)

Query: 217 YP----NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
           YP    N  +F++L+    +   + +A Q   LM   G + SV    +++    + +++D
Sbjct: 98  YPICNSNPAVFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVD 157

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
           M    ++ M+  G  P+V T+  L+    E   F  A   L  +E  G  P  V +N L+
Sbjct: 158 MFWSFFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLL 217

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVE 389
           +   K G Y  A  + D +    +  D  T+   +  +C   R +   LL K +    V 
Sbjct: 218 NWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVY 277

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            + + YN L+S F + G    A K+++ M      P++ ++  L+ G C    I EA+ +
Sbjct: 278 PNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRL 337

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
              +V +    N   + A+++ L +         +  R  +    +  +SYT  I GL +
Sbjct: 338 MDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCK 397

Query: 510 GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
            G  EEA  L   M  ++V P+  T+ V++  F +   I   K ++
Sbjct: 398 NGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIM 443



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/320 (19%), Positives = 136/320 (42%), Gaps = 3/320 (0%)

Query: 285 GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
           G +P+V T   ++   ++ +   + +SF   + ++G  PD+   N+L++ L + G + +A
Sbjct: 135 GLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGMLAKGICPDVATFNILLNALCERGKFKNA 194

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV---CGLEVEADLVVYNALLSY 401
             +   + E  + P + T+ +LL+  C  GR+    +L+       +  D+  YN  +  
Sbjct: 195 GFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDN 254

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVN 461
            C+     +   L   M      P+  ++  L+ G     KI+ A  V+  + + N   N
Sbjct: 255 LCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPN 314

Query: 462 AHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYS 521
           +  +  ++      G   +A++L    +      + V+Y   + GL +         +  
Sbjct: 315 SITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILE 374

Query: 522 QMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFH 581
           +M+   V  +  +Y  M+   CK   ++   +LL D++   +  D  T   L    F+  
Sbjct: 375 RMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVG 434

Query: 582 SSSSAVNQLVEMCNLGLIPD 601
             ++A   + +M   GL+P+
Sbjct: 435 KINNAKEIMCKMYKTGLVPN 454


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 116/545 (21%), Positives = 225/545 (41%), Gaps = 54/545 (9%)

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFG--FTPNTFARNIVMDV 163
           ++  + ++GC+    ++ + L+           LE    M   G    P+  +   V++ 
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208

Query: 164 LFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN 219
            FK G +D       ++L    LPN ++++  +  LCK   +    +V+  MV+ G  PN
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
            R +  +++ +C  G+  EA   L  M + G    V  +  L+D   +  R   A  +++
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
            M + G  P + TY +L++G+            LD++   G  P+    ++LI   +K G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR------------------------ 375
             D A+ V+  + +  L PD+ T+ +++  +C SGR                        
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 376 -------------------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYN 416
                                +L + +C      D + +N+++   CK G   ++ KL++
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGIC-----LDTIFFNSIIDSHCKEGRVIESEKLFD 503

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
            M+  G  PD  ++  L+ G C A K+DEA  +   +V      +   +  +++   +  
Sbjct: 504 LMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKIS 563

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
           R   A+ LFR         D+++Y + ++GL +  RT  A  LY  +          TY 
Sbjct: 564 RMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYN 623

Query: 537 VMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNL 596
           ++L   CK        R+ Q++    ++L+  T   +   + K   +  A +    +   
Sbjct: 624 IILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSAN 683

Query: 597 GLIPD 601
           GL+PD
Sbjct: 684 GLVPD 688



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 125/508 (24%), Positives = 219/508 (43%), Gaps = 48/508 (9%)

Query: 142 FDEMGRFG---FTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCN 194
           ++ M R G    TPN     I+M      GR+DLG      V+K+  + + ++F   L  
Sbjct: 76  YNRMARAGADEVTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKG 135

Query: 195 LCKLNDVSNVKD-VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
           LC     S+  D V+  M + G  PNV  + ILL   C   R  EA +LL +M   G   
Sbjct: 136 LCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDC 195

Query: 254 --SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
              V ++T +I+GF +   LD A   + +M+  G  PNVVTY+S+I    +A+    A  
Sbjct: 196 PPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAME 255

Query: 312 -----------------------------------FLDMLESEGHAPDLVFHNVLIDCLS 336
                                              FL  + S+G  PD+V +N L+D L 
Sbjct: 256 VLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLC 315

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG---RFSLLPKLVCGLEVEADLV 393
           K G   +A  ++D + +  L P+  T+ +LL      G       L  L+    +  +  
Sbjct: 316 KNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 375

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
           V++ L+  + K G  +QA+ +++ M  +G  PD  ++  ++  LC + ++++A+  ++ +
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
           +    +    V+ +++  L    +  KA +L    +     LD + +   I    + GR 
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRV 495

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
            E+  L+  M  I V P+  TY  ++  +C    +    +LL  ++   ++ D  T   L
Sbjct: 496 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTL 555

Query: 574 TKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
                K      A+    EM + G+ PD
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPD 583



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 105/436 (24%), Positives = 186/436 (42%), Gaps = 45/436 (10%)

Query: 175 KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG---FYPNVRMFEILLNCFC 231
           ++L+  +  +    N AL ++ + +  + V      M R G     PN+  + IL+   C
Sbjct: 44  ELLRRGRGASIYGLNCALADVARHSPAAAVSRY-NRMARAGADEVTPNLCTYGILMGSCC 102

Query: 232 KMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL-DMAGYLWEKMVQNGCSPNV 290
             GR+   +  LG +I  G  +   A+T ++ G    +R  D    +  +M Q GC PNV
Sbjct: 103 CAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIPNV 162

Query: 291 VTYTSLIKGFMEAKMFSIAFSFLDMLESEGH--APDLVFHNVLIDCLSKMGSYDDALDVY 348
            +Y  L+KG  +      A   L M+  +G    PD+V +  +I+   K G  D A   Y
Sbjct: 163 FSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTY 222

Query: 349 DGLLELKLVPDSYTFCSLLSTVCLSGRF-------------------------------S 377
             +L+  ++P+  T+ S+++ +C +                                  S
Sbjct: 223 HEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSS 282

Query: 378 LLPKLVCGL-------EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
             PK   G         VE D+V YN+L+ Y CK G   +A K++++M  +G  P+  ++
Sbjct: 283 GQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTY 342

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             LL+G      + E   +   +V N    N +V + ++    + G+  +A+ +F +   
Sbjct: 343 GTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQ 402

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
           +    D V+Y   I  L + GR E+A   + QM    + P    Y  ++ S C       
Sbjct: 403 QGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDK 462

Query: 551 VKRLLQDVIDARIELD 566
            K L+ +++D  I LD
Sbjct: 463 AKELILEMLDRGICLD 478



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/425 (21%), Positives = 195/425 (45%), Gaps = 8/425 (1%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G    + G++  + R G       F + +  Y +       +  F +M + G  P+T   
Sbjct: 353 GALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTY 412

Query: 158 NIVMDVLFKIGRVDLGIK----VLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
             V+ +L K GRV+  ++    ++ E   P  + +N  + +LC  +     K++I  M+ 
Sbjct: 413 GTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLD 472

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +G   +   F  +++  CK GR+ E+ +L  LM+ +G    +  ++ LIDG+    ++D 
Sbjct: 473 RGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDE 532

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L   MV  G  P+ VTY +LI G+ +      A      +ES G +PD++ +N+++ 
Sbjct: 533 ATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQ 592

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC---LSGRFSLLPKLVCGLEVEA 390
            L +      A ++Y G+ E     +  T+  +L  +C   L+     + + +C  +++ 
Sbjct: 593 GLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL 652

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           +   +N ++    K G  ++A  L+  +   G  PD  ++  +   L     ++E  +++
Sbjct: 653 ETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLF 712

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
             +  N    N+ +  +IV +L++ G   +A         + + L+  + ++ +  LL G
Sbjct: 713 LSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFL-DLLSG 771

Query: 511 GRTEE 515
           G+ +E
Sbjct: 772 GKYQE 776



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/252 (20%), Positives = 103/252 (40%), Gaps = 5/252 (1%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           L G+ +    ++  +  VG      T+   +  Y +       L  F EM   G +P+  
Sbjct: 526 LAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDII 585

Query: 156 ARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
             NI++  LF+  R     +L + + +        ++NI L  LCK N       +   +
Sbjct: 586 TYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 645

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
                    R F I++    K+GR  EA  L   +   G    V  ++++ +       L
Sbjct: 646 CLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLL 705

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           +    L+  M +NGC+ N     S+++  ++    + A ++L M++ +  + +    ++ 
Sbjct: 706 EELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLF 765

Query: 332 IDCLSKMGSYDD 343
           +D LS  G Y +
Sbjct: 766 LDLLSG-GKYQE 776


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/472 (22%), Positives = 201/472 (42%), Gaps = 39/472 (8%)

Query: 122 FLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK--------------- 166
           ++  +R Y R       ++AF+ M  F   P   A N +MD L                 
Sbjct: 56  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 115

Query: 167 --------------------IGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKD 206
                                 R  + +++L+       +++   +C L       + + 
Sbjct: 116 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQ 175

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
           +   M+    +PN+  F  +L+  CK G + EA  LLG +I  G S+++  + + I G  
Sbjct: 176 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLC 235

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
              RL  A  L + M +    P+VVTY +LI+G  +  M   A  +L  + ++G  PD  
Sbjct: 236 EAGRLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF 294

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL 386
            +N +ID   K+    +A ++    +    VPD  T+CSL++ +C  G      +L    
Sbjct: 295 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 354

Query: 387 E---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
           +   ++ D+VVYN+L+   C  G    A+++ N M ++G  PD  ++  ++ GLC    I
Sbjct: 355 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 414

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
            +A  V    +M     +      ++D   +  +   A+QL  R        D ++Y   
Sbjct: 415 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 474

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
           + GL + G+  E    + +M      PN  TY +++ +FC+   ++   +++
Sbjct: 475 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVI 526



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 118/469 (25%), Positives = 208/469 (44%), Gaps = 10/469 (2%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRV-DLGI---KVLKETQLPNFLSFNIALCNL 195
           + FD+M      PN  A N V+  L K G V + G+   KV++     N  ++NI +  L
Sbjct: 175 QLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGL 234

Query: 196 CKLNDVSN-VKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           C+   +   V+ V GM  R    P+V  +  L+   CK     EA   L  M+  G    
Sbjct: 235 CEAGRLPEAVRLVDGM--RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPD 292

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
              +  +IDG+ ++  +  A  L +  V  G  P+ VTY SLI G         A    +
Sbjct: 293 DFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFN 352

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
             +++G  PD+V +N L+  L   G    AL V + + E    PD  T+  +++ +C  G
Sbjct: 353 EAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMG 412

Query: 375 RFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
             S    ++    ++    D+  +N L+  +CK    + A++L   M + G  PD  ++ 
Sbjct: 413 NISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYN 472

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            +L GLC A K++E    +Q +++     N   +  +++    + +  +A ++  +   E
Sbjct: 473 SVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQE 532

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
               D VS+   I G    G  E AY+L+ +++       A T+  ++ +F  + N+ M 
Sbjct: 533 GLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMA 592

Query: 552 KRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           +++  +++      D +T   L     K  +   A   LVEM   G IP
Sbjct: 593 EKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIP 641



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 82/364 (22%), Positives = 162/364 (44%), Gaps = 3/364 (0%)

Query: 175 KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
           +++ +  LP+  ++N  +   CK++ V    +++   V KGF P+   +  L+N  C  G
Sbjct: 283 RMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEG 342

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
            +  A +L       G    +  +  L+ G      +  A  +  +M + GC P++ TY 
Sbjct: 343 DVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYN 402

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
            +I G  +    S A   ++    +G+ PD+   N LID   K    D AL + + + E 
Sbjct: 403 IVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEY 462

Query: 355 KLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQA 411
            + PD+ T+ S+L+ +C +G+ + + +    + ++    + + YN L+  FC++    +A
Sbjct: 463 GIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEA 522

Query: 412 VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
            K+   M  +G  PD  SF  L+ G C    ++ A  ++Q +     +  A     ++  
Sbjct: 523 SKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGA 582

Query: 472 LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
                  H A ++F   + + +  D  +Y V I G  +    + AY+   +M      P+
Sbjct: 583 FSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPS 642

Query: 532 AYTY 535
             T+
Sbjct: 643 MSTF 646



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 91/442 (20%), Positives = 180/442 (40%), Gaps = 10/442 (2%)

Query: 97  TGRF-ETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
            GR  E VR + G   R   V    T+   +R   +  M    +     M   G  P+ F
Sbjct: 237 AGRLPEAVRLVDG--MRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF 294

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNL----CKLNDVSNVKDVIGMM 211
             N ++D   KI  V    ++LK+     F+   +  C+L    C   DV    ++    
Sbjct: 295 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 354

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
             KG  P++ ++  L+   C  G I  A Q++  M   G    +  + ++I+G  ++  +
Sbjct: 355 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 414

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
             A  +    +  G  P+V T+ +LI G+ +      A   ++ +   G APD + +N +
Sbjct: 415 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 474

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA- 390
           ++ L K G  ++  + +  ++     P+  T+  L+   C S +     K++  +  E  
Sbjct: 475 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 534

Query: 391 --DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
             D V +N L+  FC+ G    A  L+  + +KG++    +F  L+    G   +  A  
Sbjct: 535 HPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEK 594

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           ++  ++      +++ +  ++D   +     +A       I + +   + ++   I  L 
Sbjct: 595 IFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLT 654

Query: 509 EGGRTEEAYILYSQMKHIAVPP 530
              R  +A  +   M  I V P
Sbjct: 655 VNHRVFQAVGIIHIMVKIGVVP 676



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/378 (21%), Positives = 156/378 (41%), Gaps = 8/378 (2%)

Query: 227 LNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGC 286
           +  + + GR+ +A      M       +  A+  ++D        D A  ++ +M+  G 
Sbjct: 60  IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGV 119

Query: 287 SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALD 346
           SP++ T+T  ++ F       IA   L  L   G     V +  ++  L   G   DA  
Sbjct: 120 SPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQ 175

Query: 347 VYDGLLELKLVPDSYTFCSLLSTVCLSG---RFSLLPKLVCGLEVEADLVVYNALLSYFC 403
           ++D +L   + P+   F  +L  +C  G      LL   V    +  +L  YN  +   C
Sbjct: 176 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLC 235

Query: 404 KAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAH 463
           +AG   +AV+L + M      PD  ++  L+RGLC      EA++  + ++      +  
Sbjct: 236 EAGRLPEAVRLVDGMRAYA-VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF 294

Query: 464 VHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM 523
            +  I+D   +     +A +L + A+ + +  D V+Y   I GL   G  E A  L+++ 
Sbjct: 295 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 354

Query: 524 KHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSS 583
           +   + P+   Y  ++   C +  I    +++ ++ +     D  T   +   + K  + 
Sbjct: 355 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 414

Query: 584 SSAVNQLVEMCNLGLIPD 601
           S A   + +    G +PD
Sbjct: 415 SDATVVMNDAIMKGYLPD 432



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/267 (23%), Positives = 116/267 (43%), Gaps = 2/267 (0%)

Query: 293 YTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
           Y + I+ +  A     A    + ++     P    +N ++D L     +D A  VY  +L
Sbjct: 56  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 115

Query: 353 ELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAV 412
              + PD +T    L + CL+ R  +  +L+  L      V Y  ++      G  + A 
Sbjct: 116 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALP-HRGAVAYCTVVCGLYAHGHTHDAR 174

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
           +L++ ML     P+  +F  +L  LC    + EA  +   ++    ++N   +   +  L
Sbjct: 175 QLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGL 234

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
            EAGR  +A++L         P DVV+Y   IRGL +    +EA     +M +    P+ 
Sbjct: 235 CEAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDD 293

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVI 559
           +TY  ++  +CK   ++    LL+D +
Sbjct: 294 FTYNTIIDGYCKISMVQEATELLKDAV 320



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 63/276 (22%), Positives = 109/276 (39%), Gaps = 47/276 (17%)

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
           +Y A +  + +AG    AV  +  M      P   ++  ++  L  A   D+A  VY  +
Sbjct: 55  LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM 114

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
           +    + + H HT  +       R H A++L  RA+  +     V+Y   + GL   G T
Sbjct: 115 LAAGVSPDLHTHTIRLRSFCLTARPHIALRLL-RALPHR---GAVAYCTVVCGLYAHGHT 170

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD---YHTS 570
            +A  L+ QM H  V PN   +  +L + CK  ++     LL  VI   + ++   Y+  
Sbjct: 171 HDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIW 230

Query: 571 IR-------------------------------LTKFIFKFHSSSSAVNQLVEMCNLGLI 599
           IR                               L + + K      A++ L  M N G +
Sbjct: 231 IRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL 290

Query: 600 PDEM--------WRKLGLLSDET-MTPVSLFDGFVP 626
           PD+         + K+ ++ + T +   ++F GFVP
Sbjct: 291 PDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVP 326



 Score = 41.2 bits (95), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 25/100 (25%), Positives = 46/100 (46%)

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
           +PA    ++ A +     AGR   A+  F R  +   P    +Y   +  L++    ++A
Sbjct: 48  SPATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQA 107

Query: 517 YILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
           + +Y +M    V P+ +T+ + L SFC      +  RLL+
Sbjct: 108 HKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLR 147


>gi|115446101|ref|NP_001046830.1| Os02g0470000 [Oryza sativa Japonica Group]
 gi|47497415|dbj|BAD19472.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|47497530|dbj|BAD19582.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113536361|dbj|BAF08744.1| Os02g0470000 [Oryza sativa Japonica Group]
          Length = 649

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/428 (25%), Positives = 196/428 (45%), Gaps = 11/428 (2%)

Query: 112 RVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD 171
           R  C     TF   +R + +  +    ++  D+M R+G TP+    + +++   + G VD
Sbjct: 218 RNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVD 277

Query: 172 LGIKVLKETQL--PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
             + +L  T L  PN + +N AL  LC      ++ +++  MVRKG  PN   F +L++ 
Sbjct: 278 QALDLLN-TMLCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISS 336

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
            C+   +  A ++L  M   G       + ++I+      R+D A  L   MV   C P+
Sbjct: 337 LCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPD 393

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFL-DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVY 348
            + + +++KGF  A+ +  A   +  M   +    ++ F N+LID L + G  + A  V+
Sbjct: 394 ALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTF-NILIDMLCQNGLVNYATQVF 452

Query: 349 DGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFP 408
           + +   +  PD  T+ SLL+     G   +  +L   +  + D+  YNA+L   C+A   
Sbjct: 453 EQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCKPDIFSYNAVLKGLCRAARW 512

Query: 409 NQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAI 468
             A +L   M+ K   P+  +F  L+  LC    +D AI V + +       +   + A+
Sbjct: 513 EDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNAL 572

Query: 469 VDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAV 528
           ++   E GR   A++L      +    D +SY   ++GL    R ++A  L ++M     
Sbjct: 573 INGFSEQGRLDDALKLLSTMSCKP---DAISYNSTLKGLCRAERWQDAEELVAEMLRNKC 629

Query: 529 PPNAYTYR 536
            PN  T++
Sbjct: 630 TPNEVTFK 637



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 112/468 (23%), Positives = 202/468 (43%), Gaps = 59/468 (12%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR      ++G  AR        T+   +  Y R    G + +A   +      P+T+  
Sbjct: 138 GRLADAERVLGA-ARATGAANVVTYTALIDGYCRS---GRLDDALRLIASMPVAPDTYTY 193

Query: 158 NIVMDVLFKIGR----VDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N V+  L    +     +L  ++++    PN ++F   + + C+   +     ++  M R
Sbjct: 194 NTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPR 253

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G  P+V ++  L+N F + G + +A  LL  M+    ++  NA    + G     R + 
Sbjct: 254 YGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCKPNTVCYNA---ALKGLCIAERWED 310

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
            G L  +MV+ GCSPN  T++ LI    +  +   A   L+ +E  G  PD V +N++I+
Sbjct: 311 IGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIIN 370

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL-EVEADL 392
            LS+ G  DDAL + + ++     PD+  F ++L   C + R+    +L+  +   +  L
Sbjct: 371 SLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPL 427

Query: 393 V--VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           +   +N L+   C+ G  N A +++  M     TPD  ++  LL G              
Sbjct: 428 IEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFS------------ 475

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
                                  E G    AIQLFR    +    D+ SY   ++GL   
Sbjct: 476 -----------------------EQGLVEVAIQLFRSMPCKP---DIFSYNAVLKGLCRA 509

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK----ERNIKMVKRL 554
            R E+A  L ++M     PPN  T+ +++ S C+    +R I++++++
Sbjct: 510 ARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQM 557



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 103/454 (22%), Positives = 199/454 (43%), Gaps = 51/454 (11%)

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGL 245
           +S N  +   C+   +++ + V+G   R     NV  +  L++ +C+ GR+ +A +L+  
Sbjct: 125 VSHNTLVAGYCRDGRLADAERVLGA-ARATGAANVVTYTALIDGYCRSGRLDDALRLIAS 183

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           M     + + N    ++ G    ++ + A  L  +M++N C PN VT+ + I+ F +  +
Sbjct: 184 MPVAPDTYTYN---TVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGL 240

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
              A   LD +   G  PD+V ++ LI+  S+ G  D ALD+ + +L     P++  + +
Sbjct: 241 LDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYNA 297

Query: 366 LLSTVCLSGR----------------------FSLLPKLVC-------GLEV-------- 388
            L  +C++ R                      FS+L   +C        +EV        
Sbjct: 298 ALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYG 357

Query: 389 -EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
            E D V YN +++   + G  + A++L N+M+ K   PD   F  +L+G C A +  +A 
Sbjct: 358 CEPDTVNYNIIINSLSERGRVDDALRLLNSMVCK---PDALGFNAVLKGFCRAERWHDAS 414

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            +   +  ++  +       ++D L + G  + A Q+F +    +   D+V+Y+  + G 
Sbjct: 415 ELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGF 474

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
            E G  E A  L+  M      P+ ++Y  +L   C+    +    L+ +++      + 
Sbjct: 475 SEQGLVEVAIQLFRSMP---CKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNE 531

Query: 568 HTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            T   L   + +      A+  L +M N G  PD
Sbjct: 532 VTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPD 565


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 121/487 (24%), Positives = 219/487 (44%), Gaps = 45/487 (9%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNL 195
           E ++ M   G  P     N ++D   K G V   +++L + Q     PN +++N+ +  L
Sbjct: 188 EVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGL 247

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
               ++   K++I  M+R G   +V  ++ L+  +C+ G+I EA +L   M++ G   +V
Sbjct: 248 SHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTV 307

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
             +  ++ G  +  R+  A  L + MV     P++V+Y +LI G+        AF     
Sbjct: 308 VTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAE 367

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
           L     AP +V +N LID L ++G  D A+ + D +++    PD +TF + +   C  G 
Sbjct: 368 LRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGN 427

Query: 376 FSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
             +  +L   +    ++ D   Y   +    K G P++A  +   ML +GF PD  ++  
Sbjct: 428 LPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNV 487

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
            + GL     + EA  + + ++ N    +   +T+I+   + AG   KA  LF   + + 
Sbjct: 488 FIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKG 547

Query: 493 YPLDVVSYTV-----AIRGLL-----------EGG-------------------RTEEAY 517
               VV+YTV     A+RG L           E G                   + ++AY
Sbjct: 548 IFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAY 607

Query: 518 ILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFI 577
             +++M+   + PN YTY +++   C   + +   RL +D++D  I+ D  T   L K +
Sbjct: 608 NFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHL 667

Query: 578 ---FKFH 581
              +K H
Sbjct: 668 NKDYKLH 674



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 131/575 (22%), Positives = 249/575 (43%), Gaps = 30/575 (5%)

Query: 53  VHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTR---LTGRF---ETVRGI 106
           V +T+ N P  ++AL FF W  +Q  +     S+  ++ ++ R   +   +   E V  +
Sbjct: 53  VLNTVRNRP--VVALRFFRWAERQTGFKRSEISYSVILDILARNGLMRSAYCVMEKVVSV 110

Query: 107 VGELARVGCVIKAQTFL--------LFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
             E   +  V  ++  +        L L IY +  +    L  F +M   G  P+    N
Sbjct: 111 KMENGVIDVVSSSEVSMPSVKLILDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCN 170

Query: 159 IVMDVLFKIGRVDLGIKVLKETQ--------LPNFLSFNIALCNLCKLNDVSNVKDVIGM 210
            V+ +L      D  I V +E           P  +++N  L + CK   V     ++  
Sbjct: 171 RVLRLLRD---RDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQ 227

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M   G  PN   + +L+N     G + +A +L+  M+ LG  +SV  +  LI G+    +
Sbjct: 228 MQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQ 287

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           ++ A  L E+M+  G  P VVTY +++ G  +    S A   LD++ ++   PDLV +N 
Sbjct: 288 IEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNT 347

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLE 387
           LI   +++G+  +A  ++  L    L P   T+ +L+  +C  G   +  +L   +    
Sbjct: 348 LIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHG 407

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
            + D+  +   +  FCK G    A +L++ ML++G  PD ++++  + G        +A 
Sbjct: 408 PDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAF 467

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            + + ++      +   +   +D L + G   +A +L ++ +      D V+YT  I   
Sbjct: 468 GMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAH 527

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
           L  G   +A  L+ +M    + P+  TY V++ S+     +K+      ++ +  +  + 
Sbjct: 528 LMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNV 587

Query: 568 HTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
            T   L   + K      A N   EM   G+ P++
Sbjct: 588 ITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNK 622



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 117/477 (24%), Positives = 209/477 (43%), Gaps = 53/477 (11%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF---DEMGRFGFTPN 153
           +G  E  + ++ ++ R+G  +   T+   +R Y      G + EA    +EM   G  P 
Sbjct: 250 SGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEK---GQIEEASRLGEEMLSRGAVPT 306

Query: 154 TFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIG 209
               N +M  L K GRV    K+L     +  +P+ +S+N  +    +L ++     +  
Sbjct: 307 VVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFA 366

Query: 210 MMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLR 269
            +  +   P+V  +  L++  C++G +  A +L   MI  G    V  +T  + GF ++ 
Sbjct: 367 ELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMG 426

Query: 270 RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHN 329
            L MA  L+++M+  G  P+   Y + I G ++    S AF   + + + G  PDL+ +N
Sbjct: 427 NLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYN 486

Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG-----RFSLLPKLVC 384
           V ID L K+G+  +A ++   +L   LVPD  T+ S++    ++G     R   L  L  
Sbjct: 487 VFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSK 546

Query: 385 GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
           G  +   +V Y  L+  +   G    A+  +  M +KG  P+  ++  L+ GLC  RK+D
Sbjct: 547 G--IFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMD 604

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
           +A N +  +     + N +                                   +YT+ I
Sbjct: 605 QAYNFFAEMQAKGISPNKY-----------------------------------TYTILI 629

Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
                 G  +EA  LY  M    + P++ T+R +L    K+  + +V R L++VI A
Sbjct: 630 NENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHLNKDYKLHVV-RHLENVIAA 685



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/309 (24%), Positives = 148/309 (47%), Gaps = 6/309 (1%)

Query: 65  IALSFFIWCA-KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFL 123
           I  +F ++   + R     V +++ +I  + RL G  +    +  E+ + G      TF 
Sbjct: 358 IGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRL-GDLDVAMRLKDEMIKHGPDPDVFTFT 416

Query: 124 LFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL- 182
            F+R + +     M  E FDEM   G  P+ FA    +    K+G       + +E    
Sbjct: 417 TFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLAR 476

Query: 183 ---PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEA 239
              P+ +++N+ +  L KL ++    +++  M+  G  P+   +  +++     G + +A
Sbjct: 477 GFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKA 536

Query: 240 YQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG 299
             L   M++ G   SV  +TVLI  +    RL +A   + +M + G  PNV+TY +LI G
Sbjct: 537 RALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALING 596

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
             + +    A++F   ++++G +P+   + +LI+    +G + +AL +Y  +L+ ++ PD
Sbjct: 597 LCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPD 656

Query: 360 SYTFCSLLS 368
           S T  SLL 
Sbjct: 657 SCTHRSLLK 665


>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Brachypodium distachyon]
          Length = 878

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 119/535 (22%), Positives = 223/535 (41%), Gaps = 45/535 (8%)

Query: 79  YFHDVQ---------SFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIY 129
           +FH+++         S+  M+ V+ +  GR      + G++     V  A  +   +  Y
Sbjct: 268 FFHELKAHGLRPDDVSYTSMVWVLCK-AGRLGEAEELFGQMEAERDVPCAYAYNTMIMGY 326

Query: 130 WRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI---KVLKETQLPNFL 186
              E +    +  + +   G  P+  + N ++  L K  +VD  +    V+K+   PN  
Sbjct: 327 GSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDAKPNIS 386

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           ++NI +  LC    V+    +   M   G +PN+    I+++  CK  ++ EA+++    
Sbjct: 387 TYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESA 446

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
              G + +   +  LIDG  +  ++D A  L+EKM+  G   N + YTSLI+ F      
Sbjct: 447 SERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRK 506

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
                    +   G  PDL   N  +DC+ K G  +    +++ +     +PD  +    
Sbjct: 507 EDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRS---- 562

Query: 367 LSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
                                       Y+ L+    KAG   +   ++  M  +GF  D
Sbjct: 563 ----------------------------YSILIHGLTKAGQARETSNIFQAMSQQGFALD 594

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
             ++  ++ GLC + K+D+A  V + + + +       + +IVD L +  R  +A  LF 
Sbjct: 595 ARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFE 654

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
            A  +   L+V+ Y+  I G  + GR +EAY++  +M    + PN YT+  ++ +  K  
Sbjct: 655 EAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTE 714

Query: 547 NIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            I       Q + + +   + +T   L   + +    + A     EM   GLIP+
Sbjct: 715 EIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPN 769



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 90/340 (26%), Positives = 165/340 (48%), Gaps = 11/340 (3%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           + EM R G  P+    N  MD +FK G V+ G  + ++ +    LP+  S++I +  L K
Sbjct: 513 YKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTK 572

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
                   ++   M ++GF  + R +  +++  CK G++ +AY++L  M       +V  
Sbjct: 573 AGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVAT 632

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  ++DG  ++ RLD A  L+E+    G   NV+ Y+SLI GF +      A+  L+ + 
Sbjct: 633 YGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMM 692

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
            +G  P++   N L+D L K    D+AL  +  + E+K  P++YT+  L++ +C   +++
Sbjct: 693 KKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYN 752

Query: 378 LLPKLVCGLEVE-----ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
                V   E++      ++V Y  ++S   K G    A  L+      G  PD+ SF  
Sbjct: 753 --KAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNA 810

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
           L+ G+  A +  EA  V++   +    +N     +++D L
Sbjct: 811 LIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDAL 850



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 118/483 (24%), Positives = 211/483 (43%), Gaps = 43/483 (8%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           RF+    ++  L   GC+    +F   L    +       L  FD M +    PN    N
Sbjct: 331 RFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDA-KPNISTYN 389

Query: 159 IVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
           I++D+L   GRV+   K+  E +L    PN LS NI +  LCK N +     +      +
Sbjct: 390 IIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASER 449

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF--------- 265
           G  PN   +  L++   K G+I +AY+L   M+  G   +   +T LI  F         
Sbjct: 450 GCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDG 509

Query: 266 --------RRLRRLDM------------AG------YLWEKMVQNGCSPNVVTYTSLIKG 299
                   RR  R D+            AG       ++E M   G  P+V +Y+ LI G
Sbjct: 510 HKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHG 569

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
             +A       +    +  +G A D   +N ++D L K G  D A +V + +    + P 
Sbjct: 570 LTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPT 629

Query: 360 SYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYN 416
             T+ S++  +    R     +L +      +E ++++Y++L+  F K G  ++A  +  
Sbjct: 630 VATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILE 689

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
            M+ KG TP+ Y++  L+  L    +IDEA+  +Q +     + N + ++ +++ L    
Sbjct: 690 EMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQ 749

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
           + +KA   ++    +    +VV+YT  I GL + G   +AY L+ + K     P++ ++ 
Sbjct: 750 KYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFN 809

Query: 537 VML 539
            ++
Sbjct: 810 ALI 812



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/406 (23%), Positives = 180/406 (44%), Gaps = 4/406 (0%)

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
           +D++ ++ V+  M   G+         L+    +  R+ +A++++G M  L      +A+
Sbjct: 120 HDLAALEKVLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAY 179

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
           TVLI      R+ + A  L  +M   G   +V  +T+L++          A + +D ++ 
Sbjct: 180 TVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKG 239

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL 378
               PD+V +NV IDC  K GS D A   +  L    L PD  ++ S++  +C +GR   
Sbjct: 240 SCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGE 299

Query: 379 LPKLVCGLEVEADL---VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
             +L   +E E D+     YN ++  +  A   + A KL   + ++G  P   SF  +L 
Sbjct: 300 AEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILT 359

Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
            L   RK+DEA+ ++  ++  +   N   +  I+D L  AGR ++A ++     +     
Sbjct: 360 CLGKKRKVDEALTLFD-VMKKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFP 418

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
           +++S  + +  L +  + EEA+ ++         PN+ TY  ++    K+  I    RL 
Sbjct: 419 NLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLF 478

Query: 556 QDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           + ++DA  + +      L +  F             EM   G  PD
Sbjct: 479 EKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPD 524


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 122/478 (25%), Positives = 215/478 (44%), Gaps = 18/478 (3%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWR-GEMYGMVLEAFDEMGRFGFTPNTF 155
            GR E  R +  E+A    V+   T+ + +  Y   GE+   V +  D+M   G  PN  
Sbjct: 275 AGRVEDARQLFDEMASPPDVV---TYGILIHGYCALGELENAV-KLLDDMVARGVEPNAT 330

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKE----TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
               V+ +L   GRV   + V+++      + +   +   L   C   D+ + +     M
Sbjct: 331 VYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEM 390

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
            RKG   +   +  L+N  C+ G + EA ++L  M+     +    +TVL+DG+ +  ++
Sbjct: 391 QRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKM 450

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
             A  +   MVQ G +PNVVTYT+L  G  +      A   L  + ++G   +   +N L
Sbjct: 451 AEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSL 510

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EV 388
           I+ L K G  D A+     +    L PD YT+ +L+  +C SG       L+  +    +
Sbjct: 511 INGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGI 570

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
           +  +V YN L++ FC +G      KL   ML+K   P+  ++  L++  C    +     
Sbjct: 571 KPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTE 630

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK-YPLDVVSYTVAIRGL 507
           +Y+G+   N   N + +  ++    +A R  K  Q F   ++EK + L   SY+  IR L
Sbjct: 631 IYKGMCSRNVEPNENTYNILIKGHCKA-RSMKEAQYFHNEMIEKGFRLTASSYSALIRLL 689

Query: 508 LEGGRTEEAYILYSQMKH--IAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
            +  +  EA  L+  M+       P+ Y + +   +F  E N++    L  ++++A I
Sbjct: 690 NKKKKFVEARKLFHDMRKEGFTAEPDVYNFYID-FNF-NEDNLEATLALCDELVEASI 745



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 106/437 (24%), Positives = 200/437 (45%), Gaps = 11/437 (2%)

Query: 153 NTFARNIVMDVLFKIGRVDLGIKVLKE-TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
           N  + NI++ VL   GRV+   ++  E    P+ +++ I +   C L ++ N   ++  M
Sbjct: 261 NVCSYNILLKVLCGAGRVEDARQLFDEMASPPDVVTYGILIHGYCALGELENAVKLLDDM 320

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
           V +G  PN  ++  ++   C  GR+++A  ++  M+     L    +T ++ GF     L
Sbjct: 321 VARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDL 380

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
             A   +++M + G + + VTYT+LI G   A     A   L  + +     D V + VL
Sbjct: 381 VSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVL 440

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVC-----GL 386
           +D   K G   +A  V++ +++  + P+  T+ +L   +C  G      +L+      GL
Sbjct: 441 VDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGL 500

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
           E+ A    YN+L++  CKAG+ +QA++    M   G  PD Y++  L+  LC + ++D A
Sbjct: 501 ELNA--CTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRA 558

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
            ++ Q ++ N        +  +++    +GR     +L    + +    +  +Y   ++ 
Sbjct: 559 HDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQ 618

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL- 565
              G   +    +Y  M    V PN  TY +++   CK R++K  +    ++I+    L 
Sbjct: 619 YCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLT 678

Query: 566 --DYHTSIRLTKFIFKF 580
              Y   IRL     KF
Sbjct: 679 ASSYSALIRLLNKKKKF 695



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 109/452 (24%), Positives = 198/452 (43%), Gaps = 13/452 (2%)

Query: 147 RFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKD 206
           ++G +P+  A N V+  L     +D  I++ +     N  S+NI L  LC    V + + 
Sbjct: 228 QYGISPSPEACNAVLSRL----PLDEAIELFQGLPDKNVCSYNILLKVLCGAGRVEDARQ 283

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
           +   M      P+V  + IL++ +C +G +  A +LL  M+  G   +   +T ++    
Sbjct: 284 LFDEMASP---PDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLC 340

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
              R+  A  + E MV +    +   YT+++ GF        A  + D ++ +G A D V
Sbjct: 341 DKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGV 400

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLV 383
            +  LI+ L + G   +A  V   +L  +L  D  T+  L+   C  G+ +    +   +
Sbjct: 401 TYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTM 460

Query: 384 CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
               V  ++V Y AL    CK G    A +L + M +KG   +  ++  L+ GLC A  +
Sbjct: 461 VQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYL 520

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           D+A+     +       + + +T ++D L ++G   +A  L +  +       +V+Y V 
Sbjct: 521 DQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVL 580

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           + G    GR E    L   M    + PNA TY  ++  +C   N+K    + + +    +
Sbjct: 581 MNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNV 640

Query: 564 ELDYHTSIRLTKFIFKFHSSSSAV---NQLVE 592
           E + +T   L K   K  S   A    N+++E
Sbjct: 641 EPNENTYNILIKGHCKARSMKEAQYFHNEMIE 672



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 101/390 (25%), Positives = 173/390 (44%), Gaps = 21/390 (5%)

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           K F  +   F++LL C         +  LL  +   G S S  A   ++    RL  LD 
Sbjct: 201 KAFSSDPASFDLLLLCL-------PSAPLLRRVRQYGISPSPEACNAVLS---RLP-LDE 249

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L++ +       NV +Y  L+K    A     A    D + S    PD+V + +LI 
Sbjct: 250 AIELFQGLPDK----NVCSYNILLKVLCGAGRVEDARQLFDEMAS---PPDVVTYGILIH 302

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEA 390
               +G  ++A+ + D ++   + P++  + S+++ +C  GR S    +V  +   +V  
Sbjct: 303 GYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVIL 362

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           D  VY  +LS FC  G    A + ++ M  KG   D  ++  L+ GLC A ++ EA  V 
Sbjct: 363 DEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVL 422

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
           Q ++     V+   +T +VD   + G+  +A Q+    +      +VV+YT    GL + 
Sbjct: 423 QEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQ 482

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
           G  + A  L  +M +  +  NA TY  ++   CK   +    R + D+  A ++ D +T 
Sbjct: 483 GDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTY 542

Query: 571 IRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
             L   + K      A + L EM + G+ P
Sbjct: 543 TTLIDALCKSGELDRAHDLLQEMLDNGIKP 572



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/264 (19%), Positives = 107/264 (40%), Gaps = 4/264 (1%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G  +    ++ E++  G  + A T+   +    +       +    +M   G  P+ +  
Sbjct: 483 GDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTY 542

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
             ++D L K G +D    +L+E       P  +++N+ +   C    V   K ++  M+ 
Sbjct: 543 TTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLE 602

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           K  +PN   +  L+  +C    +    ++   M +     + N + +LI G  + R +  
Sbjct: 603 KNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKE 662

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A Y   +M++ G      +Y++LI+   + K F  A      +  EG   +   +N  ID
Sbjct: 663 AQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYID 722

Query: 334 CLSKMGSYDDALDVYDGLLELKLV 357
                 + +  L + D L+E  +V
Sbjct: 723 FNFNEDNLEATLALCDELVEASIV 746



 Score = 39.3 bits (90), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 40/195 (20%), Positives = 78/195 (40%), Gaps = 7/195 (3%)

Query: 409 NQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAI 468
           ++A++L+  + DK       S+  LL+ LCGA ++++A  ++  +      V    +  +
Sbjct: 248 DEAIELFQGLPDKNVC----SYNILLKVLCGAGRVEDARQLFDEMASPPDVV---TYGIL 300

Query: 469 VDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAV 528
           +      G    A++L    +      +   YT  +  L + GR  +A  +   M H  V
Sbjct: 301 IHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKV 360

Query: 529 PPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVN 588
             +   Y  +L  FC + ++   +R   ++    +  D  T   L   + +      A  
Sbjct: 361 ILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEK 420

Query: 589 QLVEMCNLGLIPDEM 603
            L EM    L  DE+
Sbjct: 421 VLQEMLARRLDVDEV 435


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 116/545 (21%), Positives = 225/545 (41%), Gaps = 54/545 (9%)

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFG--FTPNTFARNIVMDV 163
           ++  + ++GC+    ++ + L+           LE    M   G    P+  +   V++ 
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208

Query: 164 LFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN 219
            FK G +D       ++L    LPN +++N  +  LCK   +    +V+  MV+ G  PN
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
            R +  +++ +C  G+  EA   L  M + G    V  +  L+D   +  R   A  +++
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
            M + G  P + TY +L++G+            LD++   G  P+    ++LI   +K G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR------------------------ 375
             D A+ V+  + +  L PD+ T+ +++  +C SGR                        
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 376 -------------------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYN 416
                                +L + +C      D + +N+++   CK G   ++ KL++
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGIC-----LDTIFFNSIIDSHCKEGRVIESEKLFD 503

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
            M+  G  P+  ++  L+ G C A K+DEA  +   +V      +   +  +++   +  
Sbjct: 504 LMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKIS 563

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
           R   A+ LFR         D+++Y + ++GL +  RT  A  LY  +          TY 
Sbjct: 564 RMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYN 623

Query: 537 VMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNL 596
           ++L   CK        R+ Q++    ++L+  T   +   + K   +  A +    +   
Sbjct: 624 IILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSAN 683

Query: 597 GLIPD 601
           GL+PD
Sbjct: 684 GLVPD 688



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 121/508 (23%), Positives = 215/508 (42%), Gaps = 48/508 (9%)

Query: 142 FDEMGRFG---FTPNTFARNIVMDVLFKIGRVDLGIKVL--------------------- 177
           ++ M R G    TPN     I++      GR+DLG   L                     
Sbjct: 76  YNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 135

Query: 178 ----------------KETQL---PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG--F 216
                           + TQL   PN  S+NI L  LC  N      +++ MM   G   
Sbjct: 136 LCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDC 195

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
            P+V  +  ++N F K G + +AY     M+  G   +V  +  +I    + + +D A  
Sbjct: 196 PPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAME 255

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           +   MV+NG  PN  TY S++ G+  +     A  FL  + S+G  PD+V +N L+D L 
Sbjct: 256 VLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLC 315

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG---RFSLLPKLVCGLEVEADLV 393
           K G   +A  ++D + +  L P+  T+ +LL      G       L  L+    +  +  
Sbjct: 316 KNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 375

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
           V++ L+  + K G  +QA+ +++ M  +G  PD  ++  ++  LC + ++++A+  ++ +
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
           +    +    V+ +++  L    +  KA +L    +     LD + +   I    + GR 
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRV 495

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
            E+  L+  M  I V PN  TY  ++  +C    +    +LL  ++   ++ D  T   L
Sbjct: 496 IESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTL 555

Query: 574 TKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
                K      A+    EM + G+ PD
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPD 583



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 106/436 (24%), Positives = 186/436 (42%), Gaps = 45/436 (10%)

Query: 175 KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG---FYPNVRMFEILLNCFC 231
           ++L+  +  +    N AL ++ + +  + V      M R G     PN+  + IL+   C
Sbjct: 44  ELLRRGRGASIYGLNCALADVARHSPAAAVSRY-NRMARAGADEVTPNLCTYGILIGSCC 102

Query: 232 KMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL-DMAGYLWEKMVQNGCSPNV 290
             GR+   +  LG +I  G  +   A+T L+ G    +R  D    +  +M Q GC PNV
Sbjct: 103 CAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNV 162

Query: 291 VTYTSLIKGFMEAKMFSIAFSFLDMLESEGH--APDLVFHNVLIDCLSKMGSYDDALDVY 348
            +Y  L+KG  +      A   L M+  +G    PD+V +  +I+   K G  D A   Y
Sbjct: 163 FSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTY 222

Query: 349 DGLLELKLVPDSYTFCSLLSTVCLSGRF-------------------------------S 377
             +L+  ++P+  T+ S+++ +C +                                  S
Sbjct: 223 HEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSS 282

Query: 378 LLPKLVCGL-------EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
             PK   G         VE D+V YN+L+ Y CK G   +A K++++M  +G  P+  ++
Sbjct: 283 GQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTY 342

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             LL+G      + E   +   +V N    N +V + ++    + G+  +A+ +F +   
Sbjct: 343 GTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQ 402

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
           +    D V+Y   I  L + GR E+A   + QM    + P    Y  ++ S C       
Sbjct: 403 QGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDK 462

Query: 551 VKRLLQDVIDARIELD 566
            K L+ +++D  I LD
Sbjct: 463 AKELILEMLDRGICLD 478



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 98/426 (23%), Positives = 195/426 (45%), Gaps = 10/426 (2%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G    + G++  + R G       F + +  Y +       +  F +M + G  P+T   
Sbjct: 353 GALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTY 412

Query: 158 NIVMDVLFKIGRVDLGIK----VLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
             V+ +L K GRV+  ++    ++ E   P  + +N  + +LC  +     K++I  M+ 
Sbjct: 413 GTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLD 472

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +G   +   F  +++  CK GR+ E+ +L  LM+ +G   ++  ++ LIDG+    ++D 
Sbjct: 473 RGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDE 532

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L   MV  G  P+ VTY +LI G+ +      A      +ES G +PD++ +N+++ 
Sbjct: 533 ATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQ 592

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC---LSGRFSLLPKLVCGLEVEA 390
            L +      A ++Y G+ E     +  T+  +L  +C   L+     + + +C  +++ 
Sbjct: 593 GLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL 652

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           +   +N ++    K G  ++A  L+  +   G  PD  ++  +   L     ++E  +++
Sbjct: 653 ETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLF 712

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA-IQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
             +  N    N+ +  +IV +L++ G   +A   LF   I EK+     S       LL 
Sbjct: 713 LSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLF--MIDEKHFSLEASTASLFLDLLS 770

Query: 510 GGRTEE 515
           GG+ +E
Sbjct: 771 GGKYQE 776



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/252 (20%), Positives = 103/252 (40%), Gaps = 5/252 (1%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           L G+ +    ++  +  VG      T+   +  Y +       L  F EM   G +P+  
Sbjct: 526 LAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDII 585

Query: 156 ARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
             NI++  LF+  R     +L + + +        ++NI L  LCK N       +   +
Sbjct: 586 TYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 645

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
                    R F I++    K+GR  EA  L   +   G    V  ++++ +       L
Sbjct: 646 CLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLL 705

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           +    L+  M +NGC+ N     S+++  ++    + A ++L M++ +  + +    ++ 
Sbjct: 706 EELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLF 765

Query: 332 IDCLSKMGSYDD 343
           +D LS  G Y +
Sbjct: 766 LDLLSG-GKYQE 776


>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
 gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
 gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 112/450 (24%), Positives = 204/450 (45%), Gaps = 43/450 (9%)

Query: 128 IYWRG-EMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQL 182
           +Y RG E Y  V+ +   M     +PN  + N+V+  L K+  VD  I+V +       L
Sbjct: 163 LYHRGLEFYDYVVNSNMNMN---ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCL 219

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+  ++   +  LCK   +     ++  M  +G  P+  ++ +L++  CK G +    +L
Sbjct: 220 PDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKL 279

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           +  M   G   +   +  LI G     +LD A  L E+MV + C PN VTY +LI G ++
Sbjct: 280 VDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVK 339

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
            +  + A   L  +E  G+  +   ++VLI  L K G  ++A+ ++  + E    P    
Sbjct: 340 QRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKP---- 395

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
                                       ++VVY+ L+   C+ G PN+A ++ N M+  G
Sbjct: 396 ----------------------------NIVVYSVLVDGLCREGKPNEAKEILNRMIASG 427

Query: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI 482
             P+ Y++  L++G       +EA+ V++ +     + N   ++ ++D L   GR  +A+
Sbjct: 428 CLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAM 487

Query: 483 QLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP---PNAYTYRVML 539
            ++ + +      D V+Y+  I+GL   G  + A  LY +M     P   P+  TY ++L
Sbjct: 488 MVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILL 547

Query: 540 LSFCKERNIKMVKRLLQDVIDARIELDYHT 569
              C +++I     LL  ++D   + D  T
Sbjct: 548 DGLCMQKDISRAVDLLNSMLDRGCDPDVIT 577



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 117/520 (22%), Positives = 225/520 (43%), Gaps = 50/520 (9%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEM-GRFGFTPNTF 155
           +G F++V  ++  +     VI  ++F++  R Y +  +    ++ F  M   F    +  
Sbjct: 90  SGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVK 149

Query: 156 ARNIVMDVLFKIGRVDLGIKV--------LKETQLPNFLSFNIALCNLCKLNDVSNVKDV 207
           + N V++V+   G    G++         +     PN LSFN+ +  LCKL  V    +V
Sbjct: 150 SFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEV 209

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
              M  +   P                   + Y                 +  L+DG  +
Sbjct: 210 FRGMPERKCLP-------------------DGY----------------TYCTLMDGLCK 234

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
             R+D A  L ++M   GCSP+ V Y  LI G  +    +     +D +  +G  P+ V 
Sbjct: 235 EERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVT 294

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE 387
           +N LI  L   G  D A+ + + ++  K +P+  T+ +L++ +    R +   +L+  +E
Sbjct: 295 YNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSME 354

Query: 388 VEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
                 +  +Y+ L+S   K G   +A+ L+  M +KG  P+   +  L+ GLC   K +
Sbjct: 355 ERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPN 414

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
           EA  +   ++ +    NA+ +++++    + G C +A+Q+++         +   Y+V I
Sbjct: 415 EAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLI 474

Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI---DA 561
            GL   GR +EA +++S+M  I + P+   Y  ++   C   ++    +L  +++   + 
Sbjct: 475 DGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEP 534

Query: 562 RIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           + + D  T   L   +      S AV+ L  M + G  PD
Sbjct: 535 KSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPD 574



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/434 (22%), Positives = 188/434 (43%), Gaps = 39/434 (8%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET 180
           +F L ++   +       +E F  M      P+ +    +MD L K  R+D  + +L E 
Sbjct: 189 SFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM 248

Query: 181 Q----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
           Q     P+ + +N+ +  LCK  D++ V  ++  M  KG  PN   +  L++  C  G++
Sbjct: 249 QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL 308

Query: 237 AEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSL 296
            +A  LL  M++     +   +  LI+G  + RR   A  L   M + G   N   Y+ L
Sbjct: 309 DKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVL 368

Query: 297 IKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
           I G  +      A S    +  +G  P++V ++VL+D L + G  ++A ++ + ++    
Sbjct: 369 ISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGC 428

Query: 357 VPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYN 416
           +P++YT                                Y++L+  F K G   +AV+++ 
Sbjct: 429 LPNAYT--------------------------------YSSLMKGFFKTGLCEEAVQVWK 456

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
            M   G + + + +  L+ GLCG  ++ EA+ V+  ++      +   +++I+  L   G
Sbjct: 457 EMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIG 516

Query: 477 RCHKAIQLFRRAIVEKYPL---DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
               A++L+   + ++ P    DVV+Y + + GL        A  L + M      P+  
Sbjct: 517 SMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVI 576

Query: 534 TYRVMLLSFCKERN 547
           T    L +  ++ N
Sbjct: 577 TCNTFLNTLSEKSN 590



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 80/395 (20%), Positives = 142/395 (35%), Gaps = 88/395 (22%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           L G+ +    ++  +    C+    T+   +    +       +     M   G+  N  
Sbjct: 304 LKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQH 363

Query: 156 ARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
             ++++  LFK G+ +  +    K+ ++   PN + +++ +  LC+    +  K+++  M
Sbjct: 364 IYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRM 423

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
           +  G  PN   +  L+  F K G   EA Q+   M   G S +   ++VLIDG   + R+
Sbjct: 424 IASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRV 483

Query: 272 DMAGYLWEKMVQNG--------------------------------------CSPNVVTY 293
             A  +W KM+  G                                        P+VVTY
Sbjct: 484 KEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTY 543

Query: 294 TSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE 353
             L+ G    K  S A   L+ +   G  PD++  N  ++ LS+                
Sbjct: 544 NILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEK--------------- 588

Query: 354 LKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVK 413
                         S  C  GR S L +LV  L                 K    + A  
Sbjct: 589 --------------SNSCDKGR-SFLEELVVRL----------------LKRQRVSGACT 617

Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
           +   ML K   P   ++  ++R +C  +KI+ AI+
Sbjct: 618 IVEVMLGKYLAPKTSTWAMIVREICKPKKINAAID 652


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 116/545 (21%), Positives = 225/545 (41%), Gaps = 54/545 (9%)

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFT--PNTFARNIVMDV 163
           ++  + ++GC+    ++ + L+           LE    M   G    P+  +   V++ 
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208

Query: 164 LFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN 219
            FK G +D       ++L    LPN ++++  +  LCK   +    +V+  MV+ G  PN
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
            R +  +++ +C  G+  EA   L  M + G    V  +  L+D   +  R   A  +++
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
            M + G  P + TY +L++G+            LD++   G  P+    ++LI   +K G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR------------------------ 375
             D A+ V+  + +  L PD+ T+ +++  +C SGR                        
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 376 -------------------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYN 416
                                +L + +C      D + +N+++   CK G   ++ KL++
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGIC-----LDTIFFNSIIDSHCKEGRVIESEKLFD 503

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
            M+  G  PD  ++  L+ G C A K+DEA  +   +V      +   +  +++   +  
Sbjct: 504 LMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKIS 563

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
           R   A+ LFR         D+++Y + ++GL +  RT  A  LY  +          TY 
Sbjct: 564 RMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYN 623

Query: 537 VMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNL 596
           ++L   CK        R+ Q++    ++L+  T   +   + K   +  A +    +   
Sbjct: 624 IILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSAN 683

Query: 597 GLIPD 601
           GL+PD
Sbjct: 684 GLVPD 688



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 120/508 (23%), Positives = 216/508 (42%), Gaps = 48/508 (9%)

Query: 142 FDEMGRFG---FTPNTFARNIVMDVLFKIGRVDLGIKVL--------------------- 177
           ++ M R G    TPN     I++      GR+DLG   L                     
Sbjct: 76  YNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 135

Query: 178 ----------------KETQL---PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG--F 216
                           + TQL   PN  S+NI L  LC  N      +++ MM   G   
Sbjct: 136 LCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDC 195

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
            P+V  +  ++N F K G + +AY     M+  G   +V  ++ +I    + + +D A  
Sbjct: 196 PPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAME 255

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           +   MV+NG  PN  TY S++ G+  +     A  FL  + S+G  PD+V +N L+D L 
Sbjct: 256 VLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLC 315

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG---RFSLLPKLVCGLEVEADLV 393
           K G   +A  ++D + +  L P+  T+ +LL      G       L  L+    +  +  
Sbjct: 316 KNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 375

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
           V++ L+  + K G  +QA+ +++ M  +G  PD  ++  ++  LC + ++++A+  ++ +
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
           +    +    V+ +++  L    +  KA +L    +     LD + +   I    + GR 
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRV 495

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
            E+  L+  M  I V P+  TY  ++  +C    +    +LL  ++   ++ D  T   L
Sbjct: 496 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTL 555

Query: 574 TKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
                K      A+    EM + G+ PD
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPD 583



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 106/436 (24%), Positives = 186/436 (42%), Gaps = 45/436 (10%)

Query: 175 KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG---FYPNVRMFEILLNCFC 231
           ++L+  +  +    N AL ++ + +  + V      M R G     PN+  + IL+   C
Sbjct: 44  ELLRRGRGASIYGLNCALADVARHSPAAAVSRY-NRMARAGADEVTPNLCTYGILIGSCC 102

Query: 232 KMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL-DMAGYLWEKMVQNGCSPNV 290
             GR+   +  LG +I  G  +   A+T L+ G    +R  D    +  +M Q GC PNV
Sbjct: 103 CAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNV 162

Query: 291 VTYTSLIKGFMEAKMFSIAFSFLDMLESEGH--APDLVFHNVLIDCLSKMGSYDDALDVY 348
            +Y  L+KG  +      A   L M+  +G    PD+V +  +I+   K G  D A   Y
Sbjct: 163 FSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTY 222

Query: 349 DGLLELKLVPDSYTFCSLLSTVCLSGRF-------------------------------S 377
             +L+  ++P+  T+ S+++ +C +                                  S
Sbjct: 223 HEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSS 282

Query: 378 LLPKLVCGL-------EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
             PK   G         VE D+V YN+L+ Y CK G   +A K++++M  +G  P+  ++
Sbjct: 283 GQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTY 342

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             LL+G      + E   +   +V N    N +V + ++    + G+  +A+ +F +   
Sbjct: 343 GTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQ 402

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
           +    D V+Y   I  L + GR E+A   + QM    + P    Y  ++ S C       
Sbjct: 403 QGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDK 462

Query: 551 VKRLLQDVIDARIELD 566
            K L+ +++D  I LD
Sbjct: 463 AKELILEMLDRGICLD 478



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/426 (23%), Positives = 194/426 (45%), Gaps = 10/426 (2%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G    + G++  + R G       F + +  Y +       +  F +M + G  P+T   
Sbjct: 353 GALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTY 412

Query: 158 NIVMDVLFKIGRVDLGIK----VLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
             V+ +L K GRV+  ++    ++ E   P  + +N  + +LC  +     K++I  M+ 
Sbjct: 413 GTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLD 472

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +G   +   F  +++  CK GR+ E+ +L  LM+ +G    +  ++ LIDG+    ++D 
Sbjct: 473 RGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDE 532

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L   MV  G  P+ VTY +LI G+ +      A      +ES G +PD++ +N+++ 
Sbjct: 533 ATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQ 592

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC---LSGRFSLLPKLVCGLEVEA 390
            L +      A ++Y G+ E     +  T+  +L  +C   L+     + + +C  +++ 
Sbjct: 593 GLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL 652

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           +   +N ++    K G  ++A  L+  +   G  PD  ++  +   L     ++E  +++
Sbjct: 653 ETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLF 712

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA-IQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
             +  N    N+ +  +IV +L++ G   +A   LF   I EK+     S       LL 
Sbjct: 713 LSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLF--MIDEKHFSLEASTASLFLDLLS 770

Query: 510 GGRTEE 515
           GG+ +E
Sbjct: 771 GGKYQE 776



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/252 (20%), Positives = 103/252 (40%), Gaps = 5/252 (1%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           L G+ +    ++  +  VG      T+   +  Y +       L  F EM   G +P+  
Sbjct: 526 LAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDII 585

Query: 156 ARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
             NI++  LF+  R     +L + + +        ++NI L  LCK N       +   +
Sbjct: 586 TYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 645

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
                    R F I++    K+GR  EA  L   +   G    V  ++++ +       L
Sbjct: 646 CLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLL 705

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           +    L+  M +NGC+ N     S+++  ++    + A ++L M++ +  + +    ++ 
Sbjct: 706 EELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLF 765

Query: 332 IDCLSKMGSYDD 343
           +D LS  G Y +
Sbjct: 766 LDLLSG-GKYQE 776


>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
          Length = 795

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 113/498 (22%), Positives = 213/498 (42%), Gaps = 42/498 (8%)

Query: 146 GRFGFTPNTFARNIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCKLNDV 201
           G +  +PN  + N V+D  FK G VD    L  +++ +   P+ +++N  +  LCK   +
Sbjct: 192 GGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAM 251

Query: 202 SNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVL 261
                ++  M  KG  P+ R + I++  +C +G++ EA +LL  M   G    V  +++L
Sbjct: 252 DKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLL 311

Query: 262 IDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF--------------------- 300
           I  + ++ R   A  +++ MV+ G  PN   Y  L+ G+                     
Sbjct: 312 IQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGI 371

Query: 301 -MEAKMFSI-------------AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALD 346
             E + F+I             A +    +   G  PD+V ++ +I  L K G  +DA+ 
Sbjct: 372 PFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVY 431

Query: 347 VYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFC 403
            ++ ++   L P+  +F SL+  +C  G +  + +L   +    +  D +  N ++   C
Sbjct: 432 HFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLC 491

Query: 404 KAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAH 463
           K G   +A   ++ ++  G  PD  S+  L+ G C   K+DE+I     +V      ++ 
Sbjct: 492 KEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSW 551

Query: 464 VHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM 523
            + ++++   + GR   A+ L+R    +      ++  + + GL + GR   A  LY +M
Sbjct: 552 TYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKM 611

Query: 524 KHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSS 583
                     TY  +L   C+   +    R+ +D+     ELD  T   +   + K    
Sbjct: 612 VDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRI 671

Query: 584 SSAVNQLVEMCNLGLIPD 601
             A +    M   G +PD
Sbjct: 672 DEAKSLFSAMVLRGPVPD 689



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/439 (23%), Positives = 206/439 (46%), Gaps = 42/439 (9%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNV 204
           G  P+T   NI++     +G+++  +++LK+       P+ +++++ +   CK+   +  
Sbjct: 265 GVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEA 324

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
           + V   MVRKG  PN  ++ ILL+ +   G + +   LL LMI  G      A+ +LI  
Sbjct: 325 RSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICA 384

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
           + +   +D A   + +M QNG  P+VV+Y+++I    +      A    + + SEG +P+
Sbjct: 385 YAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPN 444

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP---K 381
           ++    LI  L  +G +    ++   ++   + PD+    +++  +C  GR         
Sbjct: 445 IISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFD 504

Query: 382 LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
           +V  + V+ D+V YN L+  +C  G  ++++K  + M+  G  PD++++  LL G     
Sbjct: 505 MVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNG 564

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR------------------------ 477
           ++++A+ +Y+ +   +    A     ++  L +AGR                        
Sbjct: 565 RVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYN 624

Query: 478 -----------CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
                        +A+++F     +++ LDV ++++ I  LL+ GR +EA  L+S M   
Sbjct: 625 TVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLR 684

Query: 527 AVPPNAYTYRVMLLSFCKE 545
              P+  TY +M+ S  +E
Sbjct: 685 GPVPDVITYSLMIKSHIEE 703



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 100/421 (23%), Positives = 188/421 (44%), Gaps = 16/421 (3%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-------PNFLSFNIALCN 194
           F  M   G+TP+ F+ N ++  L    +    +++L            PN +S+N  +  
Sbjct: 150 FRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDG 209

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
             K  +V     +   M+ +G  P+V  +  L++  CK   + +A  +L  M   G    
Sbjct: 210 FFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPD 269

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
              + ++I G+  L +L+ A  L +KM  +G  P+VVTY+ LI+ + +    + A S  D
Sbjct: 270 TRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFD 329

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            +  +G  P+   +++L+   +  G+  D  D+ D L+    +P  +   ++L  +C   
Sbjct: 330 SMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLD-LMIRDGIPFEHRAFNIL--ICAYA 386

Query: 375 RFSLLPKLVCGLE------VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
           +   + K +          +  D+V Y+ ++   CK G    AV  +N M+ +G +P+  
Sbjct: 387 KHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNII 446

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
           SF  L+ GLC   +  +   +   ++      +A     I+D L + GR  +A   F   
Sbjct: 447 SFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMV 506

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
           I      DVVSY   I G    G+ +E+     +M  I + P+++TY  +L  + K   +
Sbjct: 507 IHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRV 566

Query: 549 K 549
           +
Sbjct: 567 E 567



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 117/481 (24%), Positives = 204/481 (42%), Gaps = 84/481 (17%)

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAY-------------------QLL-GL----- 245
           MVR G      +  IL+ CFC +GR+  A+                   QL+ GL     
Sbjct: 82  MVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNR 141

Query: 246 -----------MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG---CSPNVV 291
                      M  LG +  V ++  LI G    ++   A  L   M  +G   CSPNVV
Sbjct: 142 TDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVV 201

Query: 292 TYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGL 351
           +Y ++I GF +      A+     +  +G  PD+V +N LID L K  + D A+ +   +
Sbjct: 202 SYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHM 261

Query: 352 LELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFP 408
            +  ++PD+ T+  ++   C  G+      L K + G  ++ D+V Y+ L+ Y+CK G  
Sbjct: 262 FDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRC 321

Query: 409 NQAVKLYNTMLDKGFTPDNYSFVGLLRG-------------------------------- 436
            +A  ++++M+ KG  P++  +  LL G                                
Sbjct: 322 AEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNIL 381

Query: 437 LCGARK---IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           +C   K   +D+A+  +  +  N    +   ++ ++  L + GR   A+  F + + E  
Sbjct: 382 ICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGL 441

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
             +++S+T  I GL   G  ++   L  +M +  + P+A     ++ + CKE  +   + 
Sbjct: 442 SPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQD 501

Query: 554 LLQDVIDARIELD---YHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLL 610
               VI   ++ D   Y+T I    F+ K   S   + QL  M ++GL PD  W    LL
Sbjct: 502 FFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDES---IKQLDRMVSIGLRPDS-WTYNSLL 557

Query: 611 S 611
           +
Sbjct: 558 N 558



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 81/336 (24%), Positives = 150/336 (44%), Gaps = 7/336 (2%)

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
           +A  L+  MV++G +        LI+ F       +AF+   +    G     V  N LI
Sbjct: 74  LAVSLFNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLI 133

Query: 333 DCLSKMGSYDDALD-VYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVC--G 385
             L      DDA+D V+  + EL   PD +++ +L+  +C+  +      LL  +    G
Sbjct: 134 KGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGG 193

Query: 386 LEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
                ++V YN ++  F K G  ++A  L++ M+ +G  PD  ++  L+ GLC A+ +D+
Sbjct: 194 YNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDK 253

Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
           A+ + Q +       +   +  ++      G+  +A++L ++        DVV+Y++ I+
Sbjct: 254 AVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQ 313

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
              + GR  EA  ++  M      PN+  Y ++L  +  +  +  V+ LL  +I   I  
Sbjct: 314 YYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPF 373

Query: 566 DYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           ++     L     K  +   A+    EM   GL PD
Sbjct: 374 EHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPD 409



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 86/391 (21%), Positives = 155/391 (39%), Gaps = 15/391 (3%)

Query: 41  HQDFPIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRF 100
           H+ F I++  +  H  +        A++ F    +Q     DV S+  +I ++ + TGR 
Sbjct: 375 HRAFNILICAYAKHGAVDK------AMTAFTE-MRQNGLRPDVVSYSTVIHILCK-TGRV 426

Query: 101 ETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIV 160
           E       ++   G      +F   +        +  V E   EM   G  P+    N +
Sbjct: 427 EDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTI 486

Query: 161 MDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
           MD L K GRV    D    V+     P+ +S+N  +   C +  +      +  MV  G 
Sbjct: 487 MDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGL 546

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
            P+   +  LLN + K GR+ +A  L   M             +++ G  +  R+  A  
Sbjct: 547 RPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARE 606

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           L+ KMV  G    + TY +++ G  E      A    + L S+    D+   +++I+ L 
Sbjct: 607 LYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALL 666

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLV 393
           K+G  D+A  ++  ++    VPD  T+  ++ +    G       L   +E     AD  
Sbjct: 667 KVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSH 726

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
           + N ++    + G   +A      + +K F+
Sbjct: 727 MLNIIVRRLLEKGDVRRAGTYLTKIDEKNFS 757



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/284 (21%), Positives = 120/284 (42%), Gaps = 15/284 (5%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV S++ +I       G+ +     +  +  +G    + T+   L  Y++       L  
Sbjct: 514 DVVSYNTLIDGYC-FVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALAL 572

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCK 197
           + EM R          NI++  LF+ GR+    +L +K++         ++N  L  LC+
Sbjct: 573 YREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCE 632

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            + V     +   +  K F  +VR F I++N   K+GRI EA  L   M+  G    V  
Sbjct: 633 NSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVIT 692

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           ++++I        L+ +  L+  M +NGC+ +      +++  +E      A ++L  ++
Sbjct: 693 YSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKID 752

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
            +  + +     +LI  +S+   Y           E+K +P+ Y
Sbjct: 753 EKNFSLEASTAALLIPIVSEK-KYQK---------EVKFLPEKY 786


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 116/545 (21%), Positives = 225/545 (41%), Gaps = 54/545 (9%)

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFG--FTPNTFARNIVMDV 163
           ++  + ++GC+    ++ + L+           LE    M   G    P+  +   V++ 
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208

Query: 164 LFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN 219
            FK G +D       ++L    LPN ++++  +  LCK   +    +V+  MV+ G  PN
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
            R +  +++ +C  G+  EA   L  M + G    V  +  L+D   +  R   A  +++
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
            M + G  P + TY +L++G+            LD++   G  P+    ++LI   +K G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR------------------------ 375
             D A+ V+  + +  L PD+ T+ +++  +C SGR                        
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 376 -------------------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYN 416
                                +L + +C      D + +N+++   CK G   ++ KL++
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGIC-----LDTIFFNSIIDSHCKEGRVIESEKLFD 503

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
            M+  G  PD  ++  L+ G C A K+DEA  +   +V      +   +  +++   +  
Sbjct: 504 LMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKIS 563

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
           R   A+ LFR         D+++Y + ++GL +  RT  A  LY  +          TY 
Sbjct: 564 RMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYN 623

Query: 537 VMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNL 596
           ++L   CK        R+ Q++    ++L+  T   +   + K   +  A +    +   
Sbjct: 624 IILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSAN 683

Query: 597 GLIPD 601
           GL+PD
Sbjct: 684 GLVPD 688



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 120/508 (23%), Positives = 216/508 (42%), Gaps = 48/508 (9%)

Query: 142 FDEMGRFG---FTPNTFARNIVMDVLFKIGRVDLGIKVL--------------------- 177
           ++ M R G    TPN     I++      GR+DLG   L                     
Sbjct: 76  YNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 135

Query: 178 ----------------KETQL---PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG--F 216
                           + TQL   PN  S+NI L  LC  N      +++ MM   G   
Sbjct: 136 LCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDC 195

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
            P+V  +  ++N F K G + +AY     M+  G   +V  ++ +I    + + +D A  
Sbjct: 196 PPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAME 255

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           +   MV+NG  PN  TY S++ G+  +     A  FL  + S+G  PD+V +N L+D L 
Sbjct: 256 VLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLC 315

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG---RFSLLPKLVCGLEVEADLV 393
           K G   +A  ++D + +  L P+  T+ +LL      G       L  L+    +  +  
Sbjct: 316 KNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 375

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
           V++ L+  + K G  +QA+ +++ M  +G  PD  ++  ++  LC + ++++A+  ++ +
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
           +    +    V+ +++  L    +  KA +L    +     LD + +   I    + GR 
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRV 495

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
            E+  L+  M  I V P+  TY  ++  +C    +    +LL  ++   ++ D  T   L
Sbjct: 496 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTL 555

Query: 574 TKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
                K      A+    EM + G+ PD
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPD 583



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 106/436 (24%), Positives = 186/436 (42%), Gaps = 45/436 (10%)

Query: 175 KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG---FYPNVRMFEILLNCFC 231
           ++L+  +  +    N AL ++ + +  + V      M R G     PN+  + IL+   C
Sbjct: 44  ELLRRGRGASIYGLNCALADVARHSPAAAVSRY-NRMARAGADEVTPNLCTYGILIGSCC 102

Query: 232 KMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL-DMAGYLWEKMVQNGCSPNV 290
             GR+   +  LG +I  G  +   A+T L+ G    +R  D    +  +M Q GC PNV
Sbjct: 103 CAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNV 162

Query: 291 VTYTSLIKGFMEAKMFSIAFSFLDMLESEGH--APDLVFHNVLIDCLSKMGSYDDALDVY 348
            +Y  L+KG  +      A   L M+  +G    PD+V +  +I+   K G  D A   Y
Sbjct: 163 FSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTY 222

Query: 349 DGLLELKLVPDSYTFCSLLSTVCLSGRF-------------------------------S 377
             +L+  ++P+  T+ S+++ +C +                                  S
Sbjct: 223 HEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSS 282

Query: 378 LLPKLVCGL-------EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
             PK   G         VE D+V YN+L+ Y CK G   +A K++++M  +G  P+  ++
Sbjct: 283 GQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTY 342

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             LL+G      + E   +   +V N    N +V + ++    + G+  +A+ +F +   
Sbjct: 343 GTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQ 402

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
           +    D V+Y   I  L + GR E+A   + QM    + P    Y  ++ S C       
Sbjct: 403 QGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDK 462

Query: 551 VKRLLQDVIDARIELD 566
            K L+ +++D  I LD
Sbjct: 463 AKELILEMLDRGICLD 478



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/426 (23%), Positives = 194/426 (45%), Gaps = 10/426 (2%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G    + G++  + R G       F + +  Y +       +  F +M + G  P+T   
Sbjct: 353 GALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTY 412

Query: 158 NIVMDVLFKIGRVDLGIK----VLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
             V+ +L K GRV+  ++    ++ E   P  + +N  + +LC  +     K++I  M+ 
Sbjct: 413 GTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLD 472

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +G   +   F  +++  CK GR+ E+ +L  LM+ +G    +  ++ LIDG+    ++D 
Sbjct: 473 RGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDE 532

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L   MV  G  P+ VTY +LI G+ +      A      +ES G +PD++ +N+++ 
Sbjct: 533 ATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQ 592

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC---LSGRFSLLPKLVCGLEVEA 390
            L +      A ++Y G+ E     +  T+  +L  +C   L+     + + +C  +++ 
Sbjct: 593 GLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL 652

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           +   +N ++    K G  ++A  L+  +   G  PD  ++  +   L     ++E  +++
Sbjct: 653 ETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLF 712

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA-IQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
             +  N    N+ +  +IV +L++ G   +A   LF   I EK+     S       LL 
Sbjct: 713 LSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLF--MIDEKHFSLEASTASLFLDLLS 770

Query: 510 GGRTEE 515
           GG+ +E
Sbjct: 771 GGKYQE 776



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/252 (20%), Positives = 103/252 (40%), Gaps = 5/252 (1%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           L G+ +    ++  +  VG      T+   +  Y +       L  F EM   G +P+  
Sbjct: 526 LAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDII 585

Query: 156 ARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
             NI++  LF+  R     +L + + +        ++NI L  LCK N       +   +
Sbjct: 586 TYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 645

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
                    R F I++    K+GR  EA  L   +   G    V  ++++ +       L
Sbjct: 646 CLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLL 705

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           +    L+  M +NGC+ N     S+++  ++    + A ++L M++ +  + +    ++ 
Sbjct: 706 EELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLF 765

Query: 332 IDCLSKMGSYDD 343
           +D LS  G Y +
Sbjct: 766 LDLLSG-GKYQE 776


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 107/394 (27%), Positives = 193/394 (48%), Gaps = 4/394 (1%)

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           K F P+V  F  +++ +CK+G    A     +M+  G      ++ +LI G      ++ 
Sbjct: 179 KEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEE 238

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD-MLESEGHAPDLVFHNVLI 332
           A  L   M + G  P++VTY  + KGF    + S A   +  ML  EG  PDLV + VLI
Sbjct: 239 ALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLI 298

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VE 389
               +MG+ ++AL +   LL      +   +  LLS++C  G+     +L+  +E   ++
Sbjct: 299 CGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQ 358

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            DLV Y+ L+   CK G   QA++LY  M      P++++  G+L+GLC    + +A   
Sbjct: 359 PDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMY 418

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
           +  ++M+N   +  ++  ++D  ++ G   +A++L++R   +     +V++   I G  +
Sbjct: 419 FDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCK 478

Query: 510 GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
             +  EA  L   +K   + P+A TY  ++ ++C+E NI  +  LL ++    IE    T
Sbjct: 479 NRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVT 538

Query: 570 SIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
              + K + K      +V  L +M   GL PD++
Sbjct: 539 YTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQI 572



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 113/469 (24%), Positives = 208/469 (44%), Gaps = 45/469 (9%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNL 195
           + ++++   G   +    +I++D L    R    +  L++       P+ +SFN  +   
Sbjct: 136 DVYNDIKDSGTPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRY 195

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
           CKL      K    MM++ G  P+   + IL++     G + EA +L   M   G    +
Sbjct: 196 CKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDM 255

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQN-GCSPNVVTYTSLIKGF-------------- 300
             + ++  GF  L  +  A  + +KM+ + G  P++VTYT LI G               
Sbjct: 256 VTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRR 315

Query: 301 --------MEAKMFSI-------------AFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
                   +   ++S+             A   L  +E+    PDLV +++LI  L K G
Sbjct: 316 DLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQG 375

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLVCGLEVEADLVVY 395
               A+ +Y  +   ++ P+S+    +L  +C  G  S        L+    +  D+ +Y
Sbjct: 376 KVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMS-NLRPDVTLY 434

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
           N ++  + K G   +AV+LY  + DK  TP   +F  L+ G C  RK+ EA  + + I +
Sbjct: 435 NIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKL 494

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
           +    +A  +T +++   E G  +K  +L     ++     VV+YTV I+GL +  + EE
Sbjct: 495 HGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEE 554

Query: 516 AYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
           +  L   M+   + P+  TY  ++  FCK ++++    LL D++   +E
Sbjct: 555 SVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLE 603



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 117/507 (23%), Positives = 235/507 (46%), Gaps = 28/507 (5%)

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK-----ETQLPNFLSFNIALC 193
           LE  ++M + G  P+     IV      +G +    ++++     E   P+ +++ + +C
Sbjct: 240 LELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLIC 299

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
             C++ ++     +   ++  GF  NV ++ +LL+  CK G++ EA QLL  M       
Sbjct: 300 GHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQP 359

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
            +  +++LI G  +  ++  A  L+++M  N   PN   ++ ++KG  E  M S A  + 
Sbjct: 360 DLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYF 419

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           D L      PD+  +N++ID   K+G  ++A+ +Y  L +  + P   TF SL+   C +
Sbjct: 420 DSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKN 479

Query: 374 GRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
            +     +L+  ++   +E   V Y  L++ +C+ G  N+  +L   M  K   P   ++
Sbjct: 480 RKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTY 539

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             +++GLC  RK++E++ + + +     A +   +  I+    +A    KA +L    ++
Sbjct: 540 TVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLI 599

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEA-YILYS-QMKHIAVPPNAYTYRVMLLSFCKERNI 548
                   +Y V I GL   G  E+A  +L S Q ++I +   AYT   M+ + C + + 
Sbjct: 600 HNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYT--TMIKAHCVKGDA 657

Query: 549 KMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLG 608
           +   ++   +++   E+    SI+           S+ +N+L + C   LI +  +    
Sbjct: 658 QRAVKVFHQMVEKGFEV----SIK---------DYSAVINRLCKRC---LINEAKYYFCI 701

Query: 609 LLSDETMTPVSLFDGFVPCERRAGNAN 635
           +LSD       +F+  +    RAG+ +
Sbjct: 702 MLSDGVSPDQEIFEMMLNAFHRAGHVH 728



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 91/417 (21%), Positives = 190/417 (45%), Gaps = 13/417 (3%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNV 204
           GF  N    ++++  L K G+VD  +++L E +     P+ ++++I +  LCK   V   
Sbjct: 321 GFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQA 380

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
             +   M     +PN      +L   C+ G +++A      +I       V  + ++IDG
Sbjct: 381 IQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDG 440

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
           + +L  ++ A  L++++     +P++VT+ SLI GF + +    A   L+ ++  G  P 
Sbjct: 441 YVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPS 500

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV---PDSYTFCSLLSTVCLSGRFSLLPK 381
            V +  L++   + G+ +    +++ LLE+ L    P   T+  ++  +C   +     +
Sbjct: 501 AVTYTTLMNAYCEEGNINK---LHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQ 557

Query: 382 LVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
           L+  +  +    D + YN ++  FCKA    +A +L + ML     P   ++  L+ GLC
Sbjct: 558 LLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLC 617

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
               +++A  V   +   N  +    +T ++      G   +A+++F + + + + + + 
Sbjct: 618 RYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIK 677

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
            Y+  I  L +     EA   +  M    V P+   + +ML +F +  ++  V  LL
Sbjct: 678 DYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELL 734



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 79/365 (21%), Positives = 144/365 (39%), Gaps = 74/365 (20%)

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
           LR  D+   ++  +  +G   +  T + ++ G      F  A  FL   + +  AP +V 
Sbjct: 128 LRHTDIMWDVYNDIKDSGTPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVS 187

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC---------------- 371
            N ++    K+G  D A   +  +L+  ++PD+Y++  L+  +                 
Sbjct: 188 FNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDME 247

Query: 372 -----------------------LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFP 408
                                  +SG   ++ K++    ++ DLV Y  L+   C+ G  
Sbjct: 248 KQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNI 307

Query: 409 NQAVKLYNTMLDKGF-----------------------------------TPDNYSFVGL 433
            +A++L   +L  GF                                    PD  ++  L
Sbjct: 308 EEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSIL 367

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           + GLC   K+ +AI +Y+ +  N    N+  H+ I+  L E G    A   F   I+   
Sbjct: 368 IHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNL 427

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
             DV  Y + I G ++ G  EEA  LY +++  A+ P+  T+  ++  FCK R +   +R
Sbjct: 428 RPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARR 487

Query: 554 LLQDV 558
           LL+ +
Sbjct: 488 LLESI 492



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 76/325 (23%), Positives = 131/325 (40%), Gaps = 15/325 (4%)

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
           ++M   A   L  ++ +   P +  +N L   L  +   D   DVY+ + +      + T
Sbjct: 96  SRMVHDALFVLVKMKEQNLRPSIQTYNSL---LYNLRHTDIMWDVYNDIKDSGTPQSART 152

Query: 363 FCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
              ++  +C   RF    L  +   G E    +V +N ++S +CK G  + A   +  ML
Sbjct: 153 SSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMML 212

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
             G  PD YS+  L+ GL  A  ++EA+ +   +       +   +  +       G   
Sbjct: 213 KYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMS 272

Query: 480 KAIQLFRRAIV-EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            A ++ ++ +  E    D+V+YTV I G  + G  EEA  L   +       N   Y V+
Sbjct: 273 GAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVL 332

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGL 598
           L S CK   +    +LL ++    ++ D  T   L   + K      A+    EMC   +
Sbjct: 333 LSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRI 392

Query: 599 IPDEMWR--------KLGLLSDETM 615
            P+            + G+LSD  M
Sbjct: 393 FPNSFAHSGILKGLCEKGMLSDARM 417



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/245 (16%), Positives = 107/245 (43%), Gaps = 4/245 (1%)

Query: 119 AQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK 178
           A T+   +  Y        + E   EM      P      +V+  L K  +++  +++L+
Sbjct: 501 AVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLE 560

Query: 179 ETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
           + +     P+ +++N  +   CK  D+    +++  M+     P    + +L++  C+ G
Sbjct: 561 DMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYG 620

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
            + +A ++L  +     +L+  A+T +I           A  ++ +MV+ G   ++  Y+
Sbjct: 621 DVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYS 680

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
           ++I    +  + + A  +  ++ S+G +PD     ++++   + G      ++   +++ 
Sbjct: 681 AVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKF 740

Query: 355 KLVPD 359
            L+ D
Sbjct: 741 GLLHD 745


>gi|357449261|ref|XP_003594907.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483955|gb|AES65158.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1385

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 125/505 (24%), Positives = 215/505 (42%), Gaps = 44/505 (8%)

Query: 64  LIALSFFIWCAKQRDYFHDVQSFDHMISVVT------RLTGRFETV-----------RGI 106
           ++AL F  W  K+ +   ++    H+IS  T      R+ G  +T              +
Sbjct: 37  MLALKFLNWVIKKPNL--EINHLTHIISTTTHILVKARMYGYAKTTLSHMLHMDVGFNNV 94

Query: 107 VGELARVG--CVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVL 164
            G L      C      F L +R+  R  M G  +EAF  MG  GF+P+ F  N+V+  L
Sbjct: 95  FGALMETYPFCNSNPAVFDLLIRVCLRENMVGDAVEAFRLMGFRGFSPSVFTCNMVLGSL 154

Query: 165 FKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV 220
            K   VDL     KE       PN  +FNI L  LC+     +   ++  M   G +P  
Sbjct: 155 VKDREVDLFWSFFKEMIANRVSPNVATFNILLNALCERGKFKSAGVLLRKMDETGHFPTA 214

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
             +  LLN +CK GR   A +L+  M + G +  V  + VLID   R  R      +  +
Sbjct: 215 VTYNTLLNWYCKKGRYKAASELIDAMASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRR 274

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           M +N   PN +TY +LI G ++     +A    + +      P+ V +N LI      G+
Sbjct: 275 MRKNMVYPNEITYNTLINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGN 334

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNA 397
            ++AL + D ++   L P+  T+ +LL+ +    +F L+  ++  +    V    + Y  
Sbjct: 335 IEEALRLCDVMVSHGLRPNEVTYGALLNGISKHAQFGLVSSVLERMRMDGVRVGHISYTT 394

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
           ++   CK G   +AV+L + ML    +PD  +F  L+ G            +  G+V N 
Sbjct: 395 MIDGLCKNGLLEEAVQLLDDMLKVSVSPDIVTFSVLVNGF-----------LKTGLVPNR 443

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAY 517
                 +H+ ++    + G   +A+  +       +  D  + +V +      GR EEA 
Sbjct: 444 V-----LHSTLIYNYCKMGNLKEALNAYAVMNQSGHVSDHFTSSVLVASFCRCGRLEEAE 498

Query: 518 ILYSQMKHIAVPPNAYTYRVMLLSF 542
                M  + + P++ T+  ++ ++
Sbjct: 499 YFVDHMSRMGLAPSSVTFDCIIDTY 523



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 112/493 (22%), Positives = 197/493 (39%), Gaps = 14/493 (2%)

Query: 87  DHMISVVTRLT----GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF 142
           DH  S V   +    GR E     V  ++R+G    + TF   +  Y            F
Sbjct: 477 DHFTSSVLVASFCRCGRLEEAEYFVDHMSRMGLAPSSVTFDCIIDTYGNSGDALKAFSVF 536

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLG-IKVLKETQLPNFLS---FNIALCNLCKL 198
           D+M   G  P+ F    ++  L   G ++   I + + + +P  +    +N  L    + 
Sbjct: 537 DKMNSLGHLPSQFTYEGLLKGLLIGGHINEAKIFMHRPSSIPYAIGSTFYNTMLTLTSRS 596

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA- 257
            ++SN   ++  MV   F P+   +  L+   C+ G++  A  L G  I  G  LS N  
Sbjct: 597 GNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAIEKGL-LSPNPA 655

Query: 258 -WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
            +T L+DG  +      A Y++E M+  G  P+ + +  L+  +      S     L  +
Sbjct: 656 MYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVNDILSTM 715

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
            S     +L  +N+L+   SK         +Y+ ++     PD  T+ SL+   C SG  
Sbjct: 716 RSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYCKSGSL 775

Query: 377 SLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
            +  K +  + VE    D    N L+S  C+      A  L   +   G TP+  ++  L
Sbjct: 776 DVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVDTYNSL 835

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
             G       DEA  +   ++ N  A      T ++  +   G    A++L     +   
Sbjct: 836 FNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEMKILGV 895

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
               V+ +  IRGL    +T+EA  +   M  + + P   T+  ++ ++CKE N+     
Sbjct: 896 SSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEGNVAKALE 955

Query: 554 LLQDVIDARIELD 566
           L   +    ++LD
Sbjct: 956 LRSVMEQCHVKLD 968



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 106/445 (23%), Positives = 199/445 (44%), Gaps = 16/445 (3%)

Query: 142  FDEMGRFGFTPNTFARNIVMDVLFKIGRVD-----LGIKVLKETQLPNFLSFNIALCNLC 196
             DEM    F P++F    ++  L + G++       G  + K    PN   +   +  L 
Sbjct: 606  LDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAIEKGLLSPNPAMYTSLVDGLL 665

Query: 197  KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
            K         +   M+ +G  P+   F +LL+ + + G++++   +L  M +     ++ 
Sbjct: 666  KEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVNDILSTMRSRSLCFNLA 725

Query: 257  AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
             + +L+ G+ +   +     L+ +M+ +G +P+ +T+ SLI G+ ++    +A  FL  +
Sbjct: 726  TYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYCKSGSLDVAVKFLRKI 785

Query: 317  ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
              EG   D    NVL+  L +      A D+   L  L + P+  T+ SL +    +  F
Sbjct: 786  TVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVDTYNSLFNGFVRTCSF 845

Query: 377  SLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
                 ++  L           +  L+   C+ G    A++L + M   G +    +   +
Sbjct: 846  DEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEMKILGVSSQGVAMSAI 905

Query: 434  LRGLCGARKIDEAINVYQGIVMNNPAV-NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
            +RGL  +RK DEA  +  GI++    +      T ++    + G   KA++L  R+++E+
Sbjct: 906  IRGLARSRKTDEATRIL-GIMLEMQIIPTVATFTTLMHTYCKEGNVAKALEL--RSVMEQ 962

Query: 493  --YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF-CKERNIK 549
                LDV +Y V I GL   G  + A+ LY +M+   + PN   Y V++ SF C    I 
Sbjct: 963  CHVKLDVAAYNVLISGLCADGDIQAAFKLYEEMEQRDIWPNTSIYIVLIDSFLCTGNYIV 1022

Query: 550  MVKRLLQDVIDARI-ELDYHTSIRL 573
              ++LL+D+    +  LD H  I +
Sbjct: 1023 ESEKLLRDLRTRELMSLDLHGGIEI 1047



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 122/629 (19%), Positives = 244/629 (38%), Gaps = 117/629 (18%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR++    ++  +A  G      T+ + +    R             M +    PN    
Sbjct: 228 GRYKAASELIDAMASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRRMRKNMVYPNEITY 287

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N +++ L K G++ +  KV +E  L    PN +++N  +   C   ++     +  +MV 
Sbjct: 288 NTLINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVMVS 347

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G  PN   +  LLN   K  +      +L  M   G  +   ++T +IDG  +   L+ 
Sbjct: 348 HGLRPNEVTYGALLNGISKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLCKNGLLEE 407

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF-------SIAFSFLDM----------- 315
           A  L + M++   SP++VT++ L+ GF++  +        ++ +++  M           
Sbjct: 408 AVQLLDDMLKVSVSPDIVTFSVLVNGFLKTGLVPNRVLHSTLIYNYCKMGNLKEALNAYA 467

Query: 316 -LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            +   GH  D    +VL+    + G  ++A    D +  + L P S TF  ++ T   SG
Sbjct: 468 VMNQSGHVSDHFTSSVLVASFCRCGRLEEAEYFVDHMSRMGLAPSSVTFDCIIDTYGNSG 527

Query: 375 ----RFSLLPKL----------------------------------VCGLEVEADLVVYN 396
                FS+  K+                                     +        YN
Sbjct: 528 DALKAFSVFDKMNSLGHLPSQFTYEGLLKGLLIGGHINEAKIFMHRPSSIPYAIGSTFYN 587

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI-----NVYQ 451
            +L+   ++G  + AV L + M+   F PD++++  L+ GLC   K+  A+      + +
Sbjct: 588 TMLTLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAIEK 647

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
           G++  NPA+    +T++VD L++ G    A+ +F   + E    D +++ V +      G
Sbjct: 648 GLLSPNPAM----YTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKG 703

Query: 512 RTEEAYILYSQMKHIAV-----------------------------------PPNAYTYR 536
           +  +   + S M+  ++                                    P+  T+ 
Sbjct: 704 KMSKVNDILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWH 763

Query: 537 VMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNL 596
            ++L +CK  ++ +  + L+ +     ++D  T   L   + + +    A + + ++  L
Sbjct: 764 SLILGYCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNML 823

Query: 597 GLIPDEMWRKLGLLSDETMTPVSLFDGFV 625
           G+ P+              T  SLF+GFV
Sbjct: 824 GVTPN------------VDTYNSLFNGFV 840



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 91/420 (21%), Positives = 167/420 (39%), Gaps = 8/420 (1%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALC 193
            L A+  M + G   + F  ++++    + GR++     +         P+ ++F+  + 
Sbjct: 462 ALNAYAVMNQSGHVSDHFTSSVLVASFCRCGRLEEAEYFVDHMSRMGLAPSSVTFDCIID 521

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
                 D      V   M   G  P+   +E LL      G I EA   +    ++  ++
Sbjct: 522 TYGNSGDALKAFSVFDKMNSLGHLPSQFTYEGLLKGLLIGGHINEAKIFMHRPSSIPYAI 581

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF-MEAKMFSIAFSF 312
               +  ++    R   L  A  L ++MV N   P+  TYTSLI G   + KM       
Sbjct: 582 GSTFYNTMLTLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLS 641

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
              +E    +P+   +  L+D L K G    AL +++ +L   + PD+  F  LL     
Sbjct: 642 GRAIEKGLLSPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSR 701

Query: 373 SGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
            G+ S +  ++  +   +   +L  YN LL  + K     +  KLYN M+  GF PD  +
Sbjct: 702 KGKMSKVNDILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLT 761

Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
           +  L+ G C +  +D A+   + I +    V+      +V +L E      A  L ++  
Sbjct: 762 WHSLILGYCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLN 821

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
           +     +V +Y     G +     +EA  +   +      P    +  ++   C+  N+K
Sbjct: 822 MLGVTPNVDTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVK 881


>gi|414888175|tpg|DAA64189.1| TPA: hypothetical protein ZEAMMB73_647521 [Zea mays]
          Length = 667

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 132/569 (23%), Positives = 240/569 (42%), Gaps = 54/569 (9%)

Query: 48  LAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIV 107
           L P +V+  L +     +A+ F+ W   +  + H   +  +++S++  +   F  +   +
Sbjct: 91  LDPFVVNRVLRSISDSEMAVRFYWWAESRPGFDHTQFAIAYVVSLLF-VDSNFFLLSEFL 149

Query: 108 GELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEM-----GRFGFTPNTFARNIVMD 162
             +   G  +    + + L  Y R   +  V+  FDEM       FG   N F   +V +
Sbjct: 150 ERVRSQGVALHRSLYRILLSGYVRAGKFDSVIHTFDEMVTSGCREFGVDYNRFIGVLVKN 209

Query: 163 VLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
             F +      + + K   L +F +++  +  LC+   +  V+ ++  M + G +P++  
Sbjct: 210 CCFDLVEKYYSVALDKGFCLTSF-TYSRWISALCQSERIELVERLLADMDKFGCFPDIWA 268

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
             I ++C CK  R+ +A + L                                   E M 
Sbjct: 269 CNIYVDCLCKHNRLHDALKTL-----------------------------------ENMW 293

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
             G +P+VVTYT+++    + K F+ A    + +   G  PD+V   VLI  L K    D
Sbjct: 294 IRGTNPDVVTYTTVVGCLCDNKQFAEAVELWEEMVRRGLKPDIVACGVLIFGLCKSDKVD 353

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV---EADLVVYNALL 399
           +A ++   +L L L  +   + +L+S    SG  +   K++  +     E D+V YN  L
Sbjct: 354 EAFELALRMLSLNLELNVCIYNALISGFLRSGSINKAFKIISVMRTNGCEPDVVTYNIRL 413

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGF-TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           +++C  G   +A KL   M   G   PD YS+  +L+GLC A ++D A     G V ++ 
Sbjct: 414 NHYCNTGMIKEAEKLIEEMEMSGIVNPDRYSYNQMLKGLCKAHQLDRAF----GFVSDHM 469

Query: 459 AVNAHVHTA----IVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
            V           ++D   +A +   A++LF+    +    D V+Y   I GL   G   
Sbjct: 470 EVGGFCDIVSCNILIDAFCKAKKVSSALKLFKEMGYKGIQADAVTYGTLINGLYGVGYYY 529

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLT 574
            A  ++ QM    V PN   Y +ML + CK    +  +++   +I   +  D  T   L 
Sbjct: 530 LAEEIFEQMLKARVVPNVNLYNIMLHNLCKAGQFEQAQKIFLQMIQKEVSPDIITFNTLI 589

Query: 575 KFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
            ++ K   +  A++   +M   G+ PD +
Sbjct: 590 YWLGKCSRAIEAIDLFRDMTARGIEPDSL 618



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 102/428 (23%), Positives = 195/428 (45%), Gaps = 44/428 (10%)

Query: 60  CPSDLIALSFFIWCAKQRDYFHD-VQSFDHMISVVTRLTGRFETVRG----IVGELARVG 114
           C  D+ A + ++ C  + +  HD +++ ++M             +RG    +V     VG
Sbjct: 262 CFPDIWACNIYVDCLCKHNRLHDALKTLENM------------WIRGTNPDVVTYTTVVG 309

Query: 115 CVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD--- 171
           C+   + F                +E ++EM R G  P+  A  +++  L K  +VD   
Sbjct: 310 CLCDNKQF-------------AEAVELWEEMVRRGLKPDIVACGVLIFGLCKSDKVDEAF 356

Query: 172 -LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCF 230
            L +++L      N   +N  +    +   ++    +I +M   G  P+V  + I LN +
Sbjct: 357 ELALRMLSLNLELNVCIYNALISGFLRSGSINKAFKIISVMRTNGCEPDVVTYNIRLNHY 416

Query: 231 CKMGRIAEAYQLLGLMITLG-TSLSVNAWTVLIDGFRRLRRLDMA-GYLWEKMVQNGCSP 288
           C  G I EA +L+  M   G  +    ++  ++ G  +  +LD A G++ + M + G   
Sbjct: 417 CNTGMIKEAEKLIEEMEMSGIVNPDRYSYNQMLKGLCKAHQLDRAFGFVSDHM-EVGGFC 475

Query: 289 NVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVY 348
           ++V+   LI  F +AK  S A      +  +G   D V +  LI+ L  +G Y  A +++
Sbjct: 476 DIVSCNILIDAFCKAKKVSSALKLFKEMGYKGIQADAVTYGTLINGLYGVGYYYLAEEIF 535

Query: 349 DGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKA 405
           + +L+ ++VP+   +  +L  +C +G+F    K+   +   EV  D++ +N L+ +  K 
Sbjct: 536 EQMLKARVVPNVNLYNIMLHNLCKAGQFEQAQKIFLQMIQKEVSPDIITFNTLIYWLGKC 595

Query: 406 GFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVH 465
               +A+ L+  M  +G  PD+ +F  L+ GL    K  +A  V++ ++ N   ++  V 
Sbjct: 596 SRAIEAIDLFRDMTARGIEPDSLTFRYLISGLLEEGKATQAYEVWEYMLENGIILDRDVS 655

Query: 466 TAIVDRLI 473
               DRLI
Sbjct: 656 ----DRLI 659


>gi|357121994|ref|XP_003562701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Brachypodium distachyon]
          Length = 726

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 119/529 (22%), Positives = 240/529 (45%), Gaps = 16/529 (3%)

Query: 83  VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF 142
           +Q +  +I +   L+  FE       E  +VG  ++   FLL   +     +Y   L  F
Sbjct: 141 LQVYATIIRIFVELS-MFEDALLTYTEAKKVGVELQLCNFLLKCLVERNQIIYARSL--F 197

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDL--GIKVLKETQL----PNFLSFNIALCNLC 196
           D+M   G +PN ++ +++M       R+ L    ++L E ++    PN  ++   L  L 
Sbjct: 198 DDMKSSGPSPNVYSYSVLMSAYTHGDRLYLAEAFELLSEMEMKGVKPNAATYGTYLYGLS 257

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
           +   V++  + + M+ ++G   N   F  ++  FC+ G++ EA ++   M   G     +
Sbjct: 258 RTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQVQEAIEVFDAMKKGGLVPDTH 317

Query: 257 AWTVLIDGFRRLRRLDMAGY-LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
           ++++L+DG  +   + + GY L  +M +NG +P +V+Y+SL+ G   A    +AF     
Sbjct: 318 SYSILVDGLCKQGDV-LTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFELFRR 376

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC---- 371
           LE +G   D + ++++++   +  + +   D+++ ++    VPD+Y + SL+   C    
Sbjct: 377 LEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRN 436

Query: 372 LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
           L+    +  +L+    V  ++V    L+  F K    ++A    + +   G  P+   + 
Sbjct: 437 LTDALGVF-ELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYR 495

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            ++ GLC   K D    ++  ++      +  V++ I+D  ++A +  +A +LF + + E
Sbjct: 496 VIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDE 555

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
               +V +YT  I GL    R  E   L+  M    + P+   Y  +++ +CK  N+K  
Sbjct: 556 GTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAA 615

Query: 552 KRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
             + + +    +  D      L     K  +   A   + EM N GL P
Sbjct: 616 LEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQCLMEEMTNKGLTP 664



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 109/436 (25%), Positives = 198/436 (45%), Gaps = 42/436 (9%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALC 193
            +E FD M + G  P+T + +I++D L K G V    DL +++ +    P  +S++  L 
Sbjct: 300 AIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLH 359

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
            LC+   V    ++   +  +GF  +  ++ I+LN  C+   I     L   M+      
Sbjct: 360 GLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVP 419

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
               +T LI  F R R L  A  ++E M+ +G SPNVVT T L+ GF + +M   AF FL
Sbjct: 420 DAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFL 479

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
             +   G  P+L  + V+I+ L K+   D    ++  +++   VPD+             
Sbjct: 480 HKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDT------------- 526

Query: 374 GRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
                              VVY+ ++  F KA    +A +L++ MLD+G  P+ +++  L
Sbjct: 527 -------------------VVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSL 567

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           + GLC   ++ E + +++ ++      +  ++T+++    +      A+++FR       
Sbjct: 568 INGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGL 627

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK---ERNIKM 550
             D   YT  I G  +    + A  L  +M +  + P+  TY  +++ + K   ER   M
Sbjct: 628 SADAFLYTCLIGGFSKVLAMDGAQCLMEEMTNKGLTPSVVTYTNLIIGYFKIGDERKANM 687

Query: 551 V-KRLLQDVI--DARI 563
               +LQ  I  DA++
Sbjct: 688 TYNSMLQAGITPDAKL 703



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 105/437 (24%), Positives = 188/437 (43%), Gaps = 16/437 (3%)

Query: 175 KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
           KV  E QL NFL     L  L + N +   + +   M   G  PNV  + +L++ +    
Sbjct: 169 KVGVELQLCNFL-----LKCLVERNQIIYARSLFDDMKSSGPSPNVYSYSVLMSAYTHGD 223

Query: 235 RI--AEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVT 292
           R+  AEA++LL  M   G   +   +   + G  R R++  A    + + Q G   N   
Sbjct: 224 RLYLAEAFELLSEMEMKGVKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQRGNPCNTYC 283

Query: 293 YTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
           + ++I+GF        A    D ++  G  PD   +++L+D L K G   D L  YD L+
Sbjct: 284 FNAVIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQG---DVLTGYDLLV 340

Query: 353 ELK---LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAG 406
           E+    + P   ++ SLL  +C +G+  L  +L   LE +    D +VY+ +L+  C+  
Sbjct: 341 EMARNGIAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHL 400

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
                  L+N M+   F PD Y++  L+   C  R + +A+ V++ ++ +  + N    T
Sbjct: 401 NIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCT 460

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
            +VD   +     +A     +        ++  Y V I GL +  +++  + +++ M   
Sbjct: 461 ILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKR 520

Query: 527 AVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSA 586
              P+   Y +++ SF K   +    RL   ++D   + +  T   L   +         
Sbjct: 521 GYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEV 580

Query: 587 VNQLVEMCNLGLIPDEM 603
           V     M   GL PD +
Sbjct: 581 VTLFKHMIWEGLTPDRI 597



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 91/391 (23%), Positives = 164/391 (41%), Gaps = 49/391 (12%)

Query: 48  LAPHIV-HSTLLN--CPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTG-----R 99
           +AP +V +S+LL+  C +  + L+F ++   +   F      DH++  +  L G      
Sbjct: 347 IAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQGF----KHDHIVYSII-LNGCCQHLN 401

Query: 100 FETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNI 159
            E V  +  ++     V  A  +   +  + R       L  F+ M   G +PN     I
Sbjct: 402 IEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTI 461

Query: 160 VMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG 215
           ++D   K   +D     L + +    +PN   + + +  LCK+N   +V  +   M+++G
Sbjct: 462 LVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRG 521

Query: 216 FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAG 275
           + P+  ++ I+++ F K  ++ EA++L   M+  GT  +V  +T LI+G     RL    
Sbjct: 522 YVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVV 581

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
            L++ M+  G +P+ + YTSLI  + +      A      +   G + D   +  LI   
Sbjct: 582 TLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGF 641

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVY 395
           SK+ + D A  + + +    L P   T+                                
Sbjct: 642 SKVLAMDGAQCLMEEMTNKGLTPSVVTYT------------------------------- 670

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
           N ++ YF K G   +A   YN+ML  G TPD
Sbjct: 671 NLIIGYF-KIGDERKANMTYNSMLQAGITPD 700



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 73/349 (20%), Positives = 146/349 (41%), Gaps = 42/349 (12%)

Query: 293 YTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
           Y ++I+ F+E  MF  A   L   E++    +L   N L+ CL +      A  ++D + 
Sbjct: 144 YATIIRIFVELSMFEDAL--LTYTEAKKVGVELQLCNFLLKCLVERNQIIYARSLFDDMK 201

Query: 353 ELKLVPDSYTFCSLLST------VCLSGRFSLLP-------------------------- 380
                P+ Y++  L+S       + L+  F LL                           
Sbjct: 202 SSGPSPNVYSYSVLMSAYTHGDRLYLAEAFELLSEMEMKGVKPNAATYGTYLYGLSRTRQ 261

Query: 381 --------KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
                   +++C      +   +NA++  FC+ G   +A+++++ M   G  PD +S+  
Sbjct: 262 VASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSI 321

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           L+ GLC    +    ++   +  N  A     +++++  L  AG+   A +LFRR   + 
Sbjct: 322 LVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQG 381

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVK 552
           +  D + Y++ + G  +    E    L++ M H    P+AY Y  ++ +FC+ RN+    
Sbjct: 382 FKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDAL 441

Query: 553 RLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            + + ++D+ +  +  T   L     K      A   L ++   G++P+
Sbjct: 442 GVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPN 490


>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Brachypodium distachyon]
          Length = 714

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 121/517 (23%), Positives = 218/517 (42%), Gaps = 45/517 (8%)

Query: 109 ELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIG 168
           E+AR G     +     LR+      +  +   + +M + G  P+ F  N ++D   K G
Sbjct: 184 EMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAG 243

Query: 169 RVDLGIKVLKETQ------LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
           R+D  + +LK+ +      LPN +++N+ +  L +  ++     ++ +M R     +   
Sbjct: 244 RMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIM-RLSKKASAFT 302

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           +  L+        + +A  LL  M   G   +V  +  LIDG  +    + A   +++M 
Sbjct: 303 YNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMR 362

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
             G  P+++TY SLI G+ +A     A      L+  G  P ++ +N+LID   ++G  +
Sbjct: 363 AKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLE 422

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL-----PKLVCGLE---------- 387
            A  + + + E   +PD  T+  L++  C+    +++       L  GLE          
Sbjct: 423 GARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRI 482

Query: 388 -----------------------VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
                                  + +D V YN L+   CK G    A  L+  M+  G  
Sbjct: 483 SAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLR 542

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
            D  ++  L+   C   ++ EA N++ G+V +  + +   +T  +      G  + A   
Sbjct: 543 LDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGW 602

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
           FR+ + E    + V+Y V +  L   GRTE AY  + +M    + PN YTY +++   CK
Sbjct: 603 FRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCK 662

Query: 545 ERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFH 581
           E N     RL  ++    I  D+ T   L K   + H
Sbjct: 663 EGNWVHAIRLYCEMHQKGIHPDHCTHNALFKGFGEGH 699



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 116/473 (24%), Positives = 202/473 (42%), Gaps = 10/473 (2%)

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET-QL---PNFLSFNIALCN 194
           L AF EM R G  P     N V+ VL    R D    V  +  QL   P+  ++N  L +
Sbjct: 179 LSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDS 238

Query: 195 LCKLNDVSNVKDVIGMMVRK--GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
            CK   +     ++  M  +  G  PN   + +++N   + G + +A QL+ +M  L   
Sbjct: 239 FCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIM-RLSKK 297

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
            S   +  LI G      ++ AG L  +M   G  P VVTY +LI G  +      A   
Sbjct: 298 ASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVK 357

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
            D + ++G  PDL+ +N LI+   K G+   AL ++  L    L P   T+  L+   C 
Sbjct: 358 FDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCR 417

Query: 373 SGRFSLLPKLVCGLEVE---ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
            G      +L   +  E    D+  Y  L++  C           ++ ML KG  PD ++
Sbjct: 418 LGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFA 477

Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
           +   +        I  A  + + +++   + +   +  ++D L + G    A  L+ + +
Sbjct: 478 YNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMV 537

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
            +   LD V+YT  I    E GR  EA  ++  M    + P+  TY + + ++C+  N+ 
Sbjct: 538 TDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLY 597

Query: 550 MVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
           +     + +++  +E +  T   L   + +   + SA     EM   GL+P++
Sbjct: 598 LAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNK 650



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/366 (24%), Positives = 153/366 (41%), Gaps = 44/366 (12%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           TG  E  +    E+   G +    T+   +  Y +       L  F ++ R G  P    
Sbjct: 348 TGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLT 407

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQ-----LPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
            NI++D   ++G ++ G + LKE       LP+  ++ I +   C + +++ V+     M
Sbjct: 408 YNILIDGYCRLGDLE-GARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEM 466

Query: 212 VRKGFYP-----NVRM------------------------------FEILLNCFCKMGRI 236
           + KG  P     N R+                              + +L++  CK G +
Sbjct: 467 LSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSL 526

Query: 237 AEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSL 296
            +AY L   M+T G  L    +T LI       RL  A  +++ MV +G SP+VVTYT  
Sbjct: 527 KDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIF 586

Query: 297 IKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
           I  +       +A+ +   +  EG  P+ V +NVL+  L +MG  + A   +  +LE  L
Sbjct: 587 IHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGL 646

Query: 357 VPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVK 413
           VP+ YT+  L+   C  G +    +L C +    +  D   +NAL   F +    +    
Sbjct: 647 VPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKGFGEGHMYDAVQY 706

Query: 414 LYNTML 419
           L N +L
Sbjct: 707 LENVVL 712


>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
          Length = 1003

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 126/476 (26%), Positives = 219/476 (46%), Gaps = 13/476 (2%)

Query: 137 MVLEAFD---EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFN 189
           +V EAF    ++G  G  PN FA N ++D L K  R D   ++ KE       PN +++ 
Sbjct: 318 LVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYA 377

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
           I +  LCK   + +   +   M  KG    V  +  L+N +CK G +  A  LL  M+  
Sbjct: 378 ILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKE 437

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           G + +  +++ LI G  R   L     L  +M + G + N  T+T+LI GF + K    A
Sbjct: 438 GLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEA 497

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
               D +      P+ V  NV+I+    +G+   A  +YD ++E+ L PD+YT+ SL+S 
Sbjct: 498 ARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 557

Query: 370 VCLSGRFSLLPKLVCGLEVEADLVVYN----ALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
           +CL+   S   + V  LE  +  V+ N    ALL  F + G   +   L++ M  +G   
Sbjct: 558 LCLTSGVSKANEFVADLE-NSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKL 616

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           D  SF  ++         +++  +++ +       +   +T ++D L +     +A+  +
Sbjct: 617 DLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCW 676

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
            + +V+ Y  + V++TV I  L + G    A +L  +M    V PN +TY   L  F  E
Sbjct: 677 DQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATE 736

Query: 546 RNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            +++  K L   ++   +      +I L K + K      A++ + ++   G  PD
Sbjct: 737 GDMEKAKDLHSAMLQGHLASIVSFNI-LIKGLCKAGKIQEAIDLMSKITESGFSPD 791



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 109/449 (24%), Positives = 206/449 (45%), Gaps = 8/449 (1%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G  +  RG++  + + G    A ++   +    R       +E   EM   G   N +  
Sbjct: 422 GSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTF 481

Query: 158 NIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
             +++   K  ++D    L  K++    +PN ++FN+ +   C + ++     +   MV 
Sbjct: 482 TALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVE 541

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G  P+   +  L++  C    +++A + +  +      L+  + T L+ GF R  R   
Sbjct: 542 MGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTE 601

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
             +LW++M   G   ++V++T ++   ++      +      ++ +G  PD +F+  +ID
Sbjct: 602 TYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMID 661

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF---SLLPKLVCGLEVEA 390
            LSK  +   AL+ +D ++     P++ T   L++ +C SG      LL K +    V  
Sbjct: 662 ALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLP 721

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           +   YN  L YF   G   +A  L++ ML +G      SF  L++GLC A KI EAI++ 
Sbjct: 722 NKFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLM 780

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
             I  +  + +   ++ I+  L + G  +KA +L+   + +    DVV+Y + IR     
Sbjct: 781 SKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVH 840

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVML 539
           G +++A  +Y+ M    V PN  TYR +L
Sbjct: 841 GESDKALGIYTNMIRSGVQPNWDTYRALL 869



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 112/493 (22%), Positives = 204/493 (41%), Gaps = 44/493 (8%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           +F   R +  ++ + G  +    +   +R Y               M   G   +    N
Sbjct: 178 QFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYN 237

Query: 159 IVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
           ++M  L K  RV   ++V    +      + +++   +   C++ ++     +   M+R 
Sbjct: 238 VLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRL 297

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           GF P+      +++   K   + EA+ L   +  LG   +V A+  LID   +  R D A
Sbjct: 298 GFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDA 357

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             L+++M   G  PN VTY  LI    +  M   A    D +  +G    +  +N LI+ 
Sbjct: 358 DRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLING 417

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----------------- 377
             K GS D A  +  G+++  L P + ++  L++ +C +G  S                 
Sbjct: 418 YCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWN 477

Query: 378 --LLPKLVCGL-------------------EVEADLVVYNALLSYFCKAGFPNQAVKLYN 416
                 L+ G                     V  + V +N ++  +C  G   +A +LY+
Sbjct: 478 NYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYD 537

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV-NAHVHTAIVDRLIEA 475
            M++ G  PDNY++  L+ GLC    + +A N +   + N+ AV N    TA++      
Sbjct: 538 QMVEMGLKPDNYTYRSLISGLCLTSGVSKA-NEFVADLENSYAVLNNFSLTALLYGFFRE 596

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
           GR  +   L+    V    LD+VS+T+ +   L+    E++ +L+ +MK   V P+   Y
Sbjct: 597 GRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFY 656

Query: 536 RVMLLSFCKERNI 548
             M+ +  KE N+
Sbjct: 657 TCMIDALSKEENM 669



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 101/440 (22%), Positives = 189/440 (42%), Gaps = 3/440 (0%)

Query: 168 GRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILL 227
           G   L +++  E    + + +N+ +  LCK   V    +V  +MV  G   +   +  L+
Sbjct: 216 GARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLV 275

Query: 228 NCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCS 287
             FC+M  +  A ++   MI LG   S    + +ID  R+   ++ A  L  K+   G  
Sbjct: 276 YGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMV 335

Query: 288 PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
           PNV  Y +LI    + + F  A      +   G  P+ V + +LI  L K G  +DAL +
Sbjct: 336 PNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCL 395

Query: 348 YDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCK 404
           +D + +  +    Y + SL++  C  G       L+ G+  E        Y+ L++  C+
Sbjct: 396 FDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCR 455

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV 464
            G  +  ++L+  M ++G   +NY+F  L+ G C  +K+DEA  ++  ++ +N   N   
Sbjct: 456 NGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVT 515

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
              +++     G   KA QL+ + +      D  +Y   I GL       +A    + ++
Sbjct: 516 FNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLE 575

Query: 525 HIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSS 584
           +     N ++   +L  F +E        L  ++    ++LD  +   +     K H   
Sbjct: 576 NSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKE 635

Query: 585 SAVNQLVEMCNLGLIPDEMW 604
            +     EM   G+ PD+++
Sbjct: 636 KSCVLFREMKEQGVKPDDIF 655



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/381 (23%), Positives = 170/381 (44%), Gaps = 3/381 (0%)

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           L +L K+   +  +D+   M++ G + +  ++   +  +C+   +  A  L+  M + G 
Sbjct: 170 LFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGV 229

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
             S   + VL+ G  +  R+  A  +   MV  G + + VTY +L+ GF   +   +A  
Sbjct: 230 KASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALR 289

Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
               +   G  P     + +ID L K    ++A  +   L +L +VP+ + + +L+  +C
Sbjct: 290 ITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLC 349

Query: 372 LSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
            + RF    +L   + G  +E + V Y  L+   CK G    A+ L++ M DKG     Y
Sbjct: 350 KNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVY 409

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
            +  L+ G C    +D A  +  G+V       A  ++ ++  L   G     ++L R  
Sbjct: 410 PYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREM 469

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
                  +  ++T  I G  +  + +EA  L+ +M    V PN  T+ VM+  +C   NI
Sbjct: 470 AERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNI 529

Query: 549 KMVKRLLQDVIDARIELDYHT 569
           +   +L   +++  ++ D +T
Sbjct: 530 RKAFQLYDQMVEMGLKPDNYT 550



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 88/401 (21%), Positives = 173/401 (43%), Gaps = 48/401 (11%)

Query: 245 LMITLGTSLSVNAWTV--LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           L ++L + ++VN +T   ++    ++R+  +A  L++KM+Q+G   +   YT+ I+ + E
Sbjct: 151 LGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCE 210

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
           ++    A   +  +ESEG     V +NVL+  L K     +A++V + ++ + +  D  T
Sbjct: 211 SRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVT 270

Query: 363 FCSLLSTVC---------------------------------------LSGRFSLLPKLV 383
           + +L+   C                                       +   FSL  KL 
Sbjct: 271 YRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKL- 329

Query: 384 CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
             L +  ++  YNAL+   CK    + A +L+  M  +G  P+  ++  L+  LC    I
Sbjct: 330 GDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMI 389

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           ++A+ ++  +      V  + + ++++   + G   +A  L    + E       SY+  
Sbjct: 390 EDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPL 449

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           I GL   G       L+ +M    +  N YT+  ++  FCK++ +    RL   +ID+ +
Sbjct: 450 IAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNV 509

Query: 564 ---ELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
              E+ ++  I     +     +    +Q+VEM   GL PD
Sbjct: 510 IPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEM---GLKPD 547



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 63/279 (22%), Positives = 126/279 (45%), Gaps = 5/279 (1%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GRF     +  E+A  G  +   +F + +    +          F EM   G  P+    
Sbjct: 597 GRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFY 656

Query: 158 NIVMDVLFK----IGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
             ++D L K    I  ++   +++ +   PN ++  + + NLCK   + + + +   M+ 
Sbjct: 657 TCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLA 716

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
               PN   +   L+ F   G + +A  L   M+  G   S+ ++ +LI G  +  ++  
Sbjct: 717 GNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQE 775

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L  K+ ++G SP+ ++Y+++I    +    + AF   + +  +G  PD+V +N+ I 
Sbjct: 776 AIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIR 835

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
             +  G  D AL +Y  ++   + P+  T+ +LLS + L
Sbjct: 836 WCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISL 874



 Score = 45.8 bits (107), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 40/184 (21%), Positives = 71/184 (38%), Gaps = 35/184 (19%)

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
           L  G T + Y+   +L  L   R+   A +++  ++ +   ++ +V+TA +    E+   
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
             A  L  R   E      V Y V + GL +  R +EA  + + M +I V  +  TYR +
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGL 598
           +  FC+   ++M  R+  D+I                                    LG 
Sbjct: 275 VYGFCRMEELEMALRITHDMI-----------------------------------RLGF 299

Query: 599 IPDE 602
           +P E
Sbjct: 300 VPSE 303



 Score = 40.8 bits (94), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 28/121 (23%), Positives = 56/121 (46%), Gaps = 4/121 (3%)

Query: 158 NIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           NI++  L K G++    DL  K+ +    P+ +S++  +  LCK+ D++   ++   M+ 
Sbjct: 761 NILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLY 820

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           KG  P+V  + I +      G   +A  +   MI  G   + + +  L+ G   +   D 
Sbjct: 821 KGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMLHYDF 880

Query: 274 A 274
           +
Sbjct: 881 S 881


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 106/425 (24%), Positives = 190/425 (44%), Gaps = 45/425 (10%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFL 186
           +G   G +   + EM +    PN    NI ++ L K G+++    V+++ +     PN +
Sbjct: 177 KGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIV 236

Query: 187 SFNIALCNLCKLNDVSNV---KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
           ++N  +   CK      +     ++  M+     PN   F  L++ FCK   +  A    
Sbjct: 237 TYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAF 296

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
             M   G   ++  +  LI+G     +LD A  LW+KMV  G  PN+VT+ +LI GF + 
Sbjct: 297 EEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKK 356

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
           KM   A    D +  +   P+ +  N +ID   K G  ++   +++ +L+  + P+  T+
Sbjct: 357 KMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTY 416

Query: 364 CSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
             L++ +C +       KL+  +   E++AD+V YN L+  +CK G P++A KL   ML+
Sbjct: 417 NCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLN 476

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
            G  P++ ++  L+ G C                                     G    
Sbjct: 477 VGVKPNHVTYNTLMDGYC-----------------------------------MEGNLKA 501

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
           A+++  +   E    +VV+Y V I+G  + G+ E+A  L ++M    + PN  TY V+ L
Sbjct: 502 ALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVVRL 561

Query: 541 SFCKE 545
              ++
Sbjct: 562 EMLEK 566



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/383 (26%), Positives = 187/383 (48%), Gaps = 12/383 (3%)

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           S N  L  L K N+   ++ V   M+++   PN+  F I +N  CK G++ +A  ++  +
Sbjct: 167 SCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDI 226

Query: 247 ITLGTSLSVNAWTVLIDGFRR---LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
              G S ++  +  LIDG  +     ++  A  + ++M+ N   PN +T+ +LI GF + 
Sbjct: 227 KAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKD 286

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
           +    A +  + ++ +G  P++V +N LI+ LS  G  D+A+ ++D ++ L L P+  TF
Sbjct: 287 ENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTF 346

Query: 364 CSLLSTVCLSGRFSLLPKLVCGLEVEADLV----VYNALLSYFCKAGFPNQAVKLYNTML 419
            +L++  C         KL   +  E DLV     +N ++  FCKAG   +   L+N+ML
Sbjct: 347 NALINGFCKKKMIKEARKLFDDI-AEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSML 405

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV--HTAIVDRLIEAGR 477
           D+G  P+  ++  L+ GLC  + +  A  +     M N  + A V  +  ++    + G 
Sbjct: 406 DEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLN--EMENYELKADVVTYNILIGGWCKDGE 463

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
             KA +L    +      + V+Y   + G    G  + A  + +QM+      N  TY V
Sbjct: 464 PSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNV 523

Query: 538 MLLSFCKERNIKMVKRLLQDVID 560
           ++  FCK   ++   RLL ++++
Sbjct: 524 LIKGFCKTGKLEDANRLLNEMLE 546



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/328 (22%), Positives = 154/328 (46%), Gaps = 10/328 (3%)

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           G  LS+N+   L+    +        Y++++M++    PN+ T+   I G  +A   + A
Sbjct: 160 GFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKA 219

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD---ALDVYDGLLELKLVPDSYTFCSL 366
              ++ +++ G +P++V +N LID   K GS      A  +   +L  K+ P+  TF +L
Sbjct: 220 EDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTL 279

Query: 367 LSTVC-----LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
           +   C     L+ + +       GL  + ++V YN+L++     G  ++A+ L++ M+  
Sbjct: 280 IDGFCKDENVLAAKNAFEEMQRQGL--KPNIVTYNSLINGLSNNGKLDEAIALWDKMVGL 337

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
           G  P+  +F  L+ G C  + I EA  ++  I   +   NA     ++D   +AG   + 
Sbjct: 338 GLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEG 397

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
             L    + E    +V +Y   I GL        A  L ++M++  +  +  TY +++  
Sbjct: 398 FALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGG 457

Query: 542 FCKERNIKMVKRLLQDVIDARIELDYHT 569
           +CK+      ++LL ++++  ++ ++ T
Sbjct: 458 WCKDGEPSKAEKLLGEMLNVGVKPNHVT 485


>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 568

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 110/455 (24%), Positives = 207/455 (45%), Gaps = 10/455 (2%)

Query: 118 KAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL 177
           K++ + + +  Y + +     +  F+EM   GF P +   N ++  +      +   +  
Sbjct: 93  KSRLYEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFF 152

Query: 178 KETQLP---NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
            E+++    +  SF I +   C+  ++    D++  +   GF PNV ++  L++  CK G
Sbjct: 153 NESKIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRG 212

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWT--VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVT 292
            I +A  L   M   G  L  N WT  VLI G  +         ++EKM ++G  PN+ T
Sbjct: 213 EIEKAKDLFFEMGKFG--LVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYT 270

Query: 293 YTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
           Y  ++    +      AF   D +   G + ++V +N LI  L +    ++A  V D + 
Sbjct: 271 YNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMK 330

Query: 353 ELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPN 409
              + P+  T+ +L+   C  G+      L   L+   +   LV YN L+S FCK G  +
Sbjct: 331 SDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTS 390

Query: 410 QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
            A K+   M ++G  P   ++  L+        +++AI +   +       + H ++ ++
Sbjct: 391 GAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLI 450

Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
                 G+ ++A +LF+  + +K   + V Y   + G  + G +  A  L+ +M+   +P
Sbjct: 451 HGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELP 510

Query: 530 PNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
           PN  +YR M+   CKER  K  + L++ +ID  I+
Sbjct: 511 PNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGID 545



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 84/361 (23%), Positives = 156/361 (43%), Gaps = 36/361 (9%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G  E  + +  E+ + G V    T+ + +   ++  +     E +++M   G  PN +  
Sbjct: 212 GEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTY 271

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQLP----NFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N VM+   K GR     K+  E +      N +++N  +  LC+    +    V+  M  
Sbjct: 272 NCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKS 331

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G  PN+  +  L++ FC +G++ +A  L   + + G S S+  + +L+ GF +      
Sbjct: 332 DGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSG 391

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           AG + ++M + G  P+ +TYT LI  F        A      +E  G  PD+  ++VLI 
Sbjct: 392 AGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIH 451

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLV 393
                G  ++A                                S L KL+   ++E + V
Sbjct: 452 GFCIKGQMNEA--------------------------------SRLFKLMVAKKLEPNKV 479

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
           +YN ++  +CK G   +A++L+  M +K   P+  S+  ++  LC  RK  EA  + + +
Sbjct: 480 IYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKM 539

Query: 454 V 454
           +
Sbjct: 540 I 540



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 106/223 (47%), Gaps = 4/223 (1%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNL 195
           +  D+M   G  PN    N ++D    +G++   + + ++ +     P+ +++NI +   
Sbjct: 324 KVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGF 383

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
           CK  D S    V+  M  +G  P+   + IL++ F +M  + +A QL   M  LG +  V
Sbjct: 384 CKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDV 443

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
           + ++VLI GF    +++ A  L++ MV     PN V Y +++ G+ +      A      
Sbjct: 444 HTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFRE 503

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP 358
           +E +   P++  +  +I+ L K     +A  + + +++  + P
Sbjct: 504 MEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDP 546



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 81/391 (20%), Positives = 160/391 (40%), Gaps = 53/391 (13%)

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLI------DGFRRLRRLDMA 274
           R++E+++N + +   +  +      M+  G     N +  L+        F +  R    
Sbjct: 95  RLYEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWR---- 150

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
            +  E  ++     +V ++  +IKG  EA     +F  L  L   G +P++V +  LID 
Sbjct: 151 -FFNESKIK--VDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDG 207

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG----RFSLLPKLVCGLEVEA 390
             K G  + A D++  + +  LV + +T+  L+  +  +G     F +  K+     V  
Sbjct: 208 CCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQED-GVFP 266

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           +L  YN +++  CK G    A KL++ M ++G + +  ++  L+ GLC   K +EA  V 
Sbjct: 267 NLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVM 326

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
               M +  +N                                  ++++Y   I G    
Sbjct: 327 DQ--MKSDGINP---------------------------------NLITYNTLIDGFCGV 351

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
           G+  +A  L   +K   + P+  TY +++  FCK+ +     ++++++ +  I+    T 
Sbjct: 352 GKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITY 411

Query: 571 IRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
             L     +  +   A+     M  LGL PD
Sbjct: 412 TILIDTFARMDNMEKAIQLRSPMEELGLTPD 442



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/265 (19%), Positives = 125/265 (47%), Gaps = 2/265 (0%)

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           +I G ++++ F+ +     + ESE        + V+I+   +  S D ++  ++ +++  
Sbjct: 65  VISGKIQSQFFTSSSLLHYVTESETSETKSRLYEVMINAYVQSQSLDSSISYFNEMVDKG 124

Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYN--ALLSYFCKAGFPNQAVK 413
            VP S  F +LL+ V  S  F+   +     +++ DL VY+   ++   C+AG   ++  
Sbjct: 125 FVPGSNCFNNLLTFVVGSSSFNQWWRFFNESKIKVDLDVYSFGIVIKGCCEAGEIEKSFD 184

Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
           L   + + GF+P+   +  L+ G C   +I++A +++  +       N   +T ++  L 
Sbjct: 185 LLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLF 244

Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
           + G   +  +++ +   +    ++ +Y   +    + GRT++A+ L+ +M+   V  N  
Sbjct: 245 KNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIV 304

Query: 534 TYRVMLLSFCKERNIKMVKRLLQDV 558
           TY  ++   C+E       +++  +
Sbjct: 305 TYNTLIGGLCREMKANEANKVMDQM 329


>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
 gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 179/364 (49%), Gaps = 3/364 (0%)

Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
           +V  F IL+NCF ++ R+  A+ +LG +I LG       ++ LI+G     +   A   +
Sbjct: 118 DVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFF 177

Query: 279 EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
           ++MV +G  PN+ TY ++IKGF +    ++A   L  ++  G  PD+V +N +ID L K 
Sbjct: 178 DEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKD 237

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR---FSLLPKLVCGLEVEADLVVY 395
               +ALD++  +    + PD +T+  L+  +C S +    S L   +  L +  D+V +
Sbjct: 238 RLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTF 297

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
           N L+   CK G  ++A  +   M++KG  P+  ++  L+ G C   K+ EA  V+  ++ 
Sbjct: 298 NILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMIT 357

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
                N   +  +++   +A R  +A +LF          +  +Y   I GL + GR  E
Sbjct: 358 KGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCE 417

Query: 516 AYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTK 575
           A  L+  M+     P+  T  ++L S CK   +    RL + + D+ ++ +  T   L +
Sbjct: 418 ARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIR 477

Query: 576 FIFK 579
            ++K
Sbjct: 478 AMYK 481



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 119/470 (25%), Positives = 221/470 (47%), Gaps = 41/470 (8%)

Query: 9   LFYTAQRTQILKTIISFKSIHQISSP----------KVCATTHQDFPIILAPHIVHSTLL 58
           L + +QR+Q  K +I       IS            K C+ T+ +  +    H++H   L
Sbjct: 22  LGFHSQRSQTEKGMICCLHTSTISRSRSGSGRQKYQKGCSLTNIEDALFSFNHMIHKHPL 81

Query: 59  NCPSD----------------LIALSFFIWCAK-QRDYFHDVQSFDHMISVVTRLTGRFE 101
            C  +                +++LS  I   + +RD FH    F+ +I+  +RL  R +
Sbjct: 82  PCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFH----FNILINCFSRLQ-RVD 136

Query: 102 TVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVM 161
               ++G++ ++G    A TF   +      + +   +E FDEM   G+ PN    N ++
Sbjct: 137 FAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTII 196

Query: 162 DVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFY 217
               KIG+  + + +LK+       P+ + +N  +  LCK   VS   D+   +  KG  
Sbjct: 197 KGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVR 256

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
           P+V  + IL++  C   +  EA  L   M++L     V  + +L+D   +   L  A  +
Sbjct: 257 PDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGI 316

Query: 278 WEKMVQNGCSPNVVTYTSLIKGF-MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
            + M++ G  PN  TY SL+ G+ ++ K+F     F D + ++G  P++V +N+LI+   
Sbjct: 317 IKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVF-DAMITKGCMPNVVSYNILINGYC 375

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLV 393
           K    D+A +++D +    L+P+++ + +L+S +C +GR     +L   ++ +    DLV
Sbjct: 376 KAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLV 435

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
               LL   CK G+ + A++L+  M D    P+  ++  L+R +  + KI
Sbjct: 436 TCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKI 485



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 91/364 (25%), Positives = 181/364 (49%), Gaps = 3/364 (0%)

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           FNI +    +L  V     V+G +++ GF P+   F  L+N  C   + A A +    M+
Sbjct: 122 FNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMV 181

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
             G   +++ +  +I GF ++ +  +A  L +KM + G  P++V Y ++I G  + ++ S
Sbjct: 182 ASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVS 241

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A      ++ +G  PD+  +++L+  L      ++A  +++ ++ L ++PD  TF  L+
Sbjct: 242 EALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILV 301

Query: 368 STVCLSGRFSL---LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
             +C  G  S    + K++    VE +   YN+L++ +C      +A  +++ M+ KG  
Sbjct: 302 DKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCM 361

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           P+  S+  L+ G C A++IDEA  ++  +       N   +  ++  L +AGR  +A +L
Sbjct: 362 PNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEAREL 421

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
           F+    +    D+V+ T+ +  L + G  + A  L+  M+   + PN  TY +++ +  K
Sbjct: 422 FKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYK 481

Query: 545 ERNI 548
              I
Sbjct: 482 SGKI 485



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 69/306 (22%), Positives = 134/306 (43%), Gaps = 40/306 (13%)

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
           L  ++ A + +  M+     P +V +  L+   +  K +    S    +E      D+  
Sbjct: 62  LTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFH 121

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLV 383
            N+LI+C S++   D A  V   +++L   PD+ TF SL++ +C   +F+       ++V
Sbjct: 122 FNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMV 181

Query: 384 CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
                + +L  YN ++  FCK G    AV L   M   G  PD   +  ++ GLC  R +
Sbjct: 182 AS-GYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLV 240

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
            EA++++  I                      G+  +               DV +Y++ 
Sbjct: 241 SEALDIFSEI---------------------KGKGVRP--------------DVFTYSIL 265

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           + GL    + EEA  L+++M  + + P+  T+ +++   CKE  +   + +++ +I+  +
Sbjct: 266 MHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGV 325

Query: 564 ELDYHT 569
           E +Y T
Sbjct: 326 EPNYAT 331


>gi|359492929|ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18475-like [Vitis vinifera]
          Length = 513

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 117/439 (26%), Positives = 207/439 (47%), Gaps = 22/439 (5%)

Query: 34  PKVCATTHQDFPIILAPHIVHSTLLNC----PSDLIALSFFIWCAKQRDYFHDVQSFDHM 89
           P   ATT    P      I H + +N          AL  F   A+QR + H+  ++  +
Sbjct: 40  PATEATTTMVEPRKKPKFISHESAINLIKRETDPQRALEIFNRVAEQRGFSHNNATYATI 99

Query: 90  ISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRF- 148
           +  + + + +F+ +  ++ ++    C      FL  ++ + +  ++  V+E FD +    
Sbjct: 100 LHKLAK-SKKFQAIDAVLHQMTYETCKFHEGIFLNLMKHFSKLSLHERVVEMFDAIRPIV 158

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-----PNFLSFNIALCNLCKLNDVSN 203
              P+  A +  +++L +  +VDL  K L  ++      PN   FNI + + CK  D+ +
Sbjct: 159 REKPSLKAISTCLNLLVESNQVDLTRKFLLNSKKSLNLEPNTCIFNILVKHHCKNGDIDS 218

Query: 204 VKDVIGMMVRKGF-YPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT----LGTSLSVNAW 258
             +V+  M +    YPN+  +  L+N  C  GR+ EA +L   M++    L  +L+ NA 
Sbjct: 219 AFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNA- 277

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
             LI+GF    ++D A  + E M +NGC+PNV  Y++L+ GF +      A    D ++S
Sbjct: 278 --LINGFCHGEKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKS 335

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL 378
            G  PD V +  LI+   + G  D+A+++   + E K   D+ TF  +L  +C  GRF  
Sbjct: 336 LGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMRENKCRADTVTFNVILGGLCREGRFEE 395

Query: 379 LPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
              ++  L  E    +   Y  +L+  C+ G   +A +L   ML +G  P   +   LL 
Sbjct: 396 ARGMLERLPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLV 455

Query: 436 GLCGARKIDEAINVYQGIV 454
            LC A K+ +A+    G++
Sbjct: 456 HLCEAGKVGDAVMALLGLL 474



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 78/331 (23%), Positives = 154/331 (46%), Gaps = 22/331 (6%)

Query: 287 SPNVVTYTSLIKGFMEAKMFSIAFSFL-DMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL 345
            P++   ++ +   +E+    +   FL +  +S    P+    N+L+    K G  D A 
Sbjct: 161 KPSLKAISTCLNLLVESNQVDLTRKFLLNSKKSLNLEPNTCIFNILVKHHCKNGDIDSAF 220

Query: 346 DVYDGLLELKLV-PDSYTFCSLLSTVCLSGRF----SLLPKLVCGLEVEADLVVYNALLS 400
           +V + + +  +  P+  T+ +L++ +C SGR      L  ++V   ++  D + YNAL++
Sbjct: 221 EVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALIN 280

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
            FC     ++A+K+   M   G  P+ +++  L+ G C   +++EA  V+  +       
Sbjct: 281 GFCHGEKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKP 340

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
           +   +T +++    AGR  +A++L +     K   D V++ V + GL   GR EEA  + 
Sbjct: 341 DTVGYTTLINFFCRAGRVDEAMELLKDMRENKCRADTVTFNVILGGLCREGRFEEARGML 400

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKF 580
            ++ +  V  N  +YR++L S C+E  ++   +L+  ++   +   + TS  L       
Sbjct: 401 ERLPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNEL------- 453

Query: 581 HSSSSAVNQLVEMCNLGLIPDEMWRKLGLLS 611
                    LV +C  G + D +   LGLL 
Sbjct: 454 ---------LVHLCEAGKVGDAVMALLGLLE 475



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 76/298 (25%), Positives = 120/298 (40%), Gaps = 47/298 (15%)

Query: 138 VLEAFDEMGRFGFT-PNTFARNIVMDVLFKIGRVDLGIK-----VLKETQLPNFLSFNIA 191
             E  +EM +   + PN    + +++ L   GR+   I+     V K+  LP+ L++N  
Sbjct: 219 AFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNAL 278

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           +   C    V     ++  M + G  PNV  +  L+N FCK GR+ EA ++   M +LG 
Sbjct: 279 INGFCHGEKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGL 338

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
                 +T LI+ F R  R+D A  L + M +N C  + VT+  ++ G      F  A  
Sbjct: 339 KPDTVGYTTLINFFCRAGRVDEAMELLKDMRENKCRADTVTFNVILGGLCREGRFEEARG 398

Query: 312 FLDMLESEGH-----------------------------------APDLVFHNVLIDCLS 336
            L+ L  EG                                     P     N L+  L 
Sbjct: 399 MLERLPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLC 458

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVV 394
           + G   DA+    GLLEL   P+  ++  L+  +C         KL+   E+  DLV+
Sbjct: 459 EAGKVGDAVMALLGLLELGFKPEPNSWALLVELICRER------KLLPAFELLDDLVI 510



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/286 (20%), Positives = 115/286 (40%), Gaps = 48/286 (16%)

Query: 40  THQDFPIILAPHIVHSTLLN--CPSDLI--ALSFFIWCAKQRDYFHDVQSFDHMISVVTR 95
           +H  +P +    I +STL+N  C S  +  A+  F     +     D  +++ +I+    
Sbjct: 229 SHVSYPNL----ITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCH 284

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
              + +    I+  + + GC      +   +  + +        E FDEM   G  P+T 
Sbjct: 285 -GEKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTV 343

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKE---------------------------------TQL 182
               +++   + GRVD  +++LK+                                  +L
Sbjct: 344 GYTTLINFFCRAGRVDEAMELLKDMRENKCRADTVTFNVILGGLCREGRFEEARGMLERL 403

Query: 183 P------NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
           P      N  S+ I L +LC+  ++     ++G+M+ +G  P+      LL   C+ G++
Sbjct: 404 PYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKV 463

Query: 237 AEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
            +A   L  ++ LG     N+W +L++   R R+L  A  L + +V
Sbjct: 464 GDAVMALLGLLELGFKPEPNSWALLVELICRERKLLPAFELLDDLV 509


>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
 gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
          Length = 603

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 119/544 (21%), Positives = 237/544 (43%), Gaps = 45/544 (8%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
           AL F+ W A +  + H + + + ++  + R  G      G          V    +F + 
Sbjct: 79  ALGFYHWAATRPGFSHTLFTRNSLLLALVR-GGHLSDALGFFQSSISEPNV---SSFNIL 134

Query: 126 LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ---- 181
           LR +   + + +V     EM   G T N     +++  L     +D  +           
Sbjct: 135 LRGFAARDDFEVVNALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKC 194

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
            P   ++ + +  LCK + V    DV   M+RKG+ P++  +  L++   K GR+ EA +
Sbjct: 195 EPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARK 254

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           L+ LM+  G   +  A+T ++ G  +  R+  A    ++M +    P V TY+ ++ G++
Sbjct: 255 LVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYI 314

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
                  AF+ ++ +     APD + + + I+ L  +G  ++A  V++ ++E    PD +
Sbjct: 315 GMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMH 374

Query: 362 TFCSLLSTVCLSGRFSLLP---KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           T+  ++   C  G  +      +L+    V+ +  +Y  ++  F K+    +A++LY  +
Sbjct: 375 TYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRI 434

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
           L  G  P   ++  ++  LC  +K+DEA+ + +                           
Sbjct: 435 LKDGILPSTVTYNTVINALCKLKKMDEALELLR--------------------------- 467

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
               ++ RR   E+    +V+Y++ I GL + G  E A+ L ++M    V P+ +TY  +
Sbjct: 468 ----EMQRRK--EELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSL 521

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGL 598
           + +      +     LL++++ A I  D HT   L + + +     +A + L EM   G 
Sbjct: 522 IQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCR-SDVDAAWDLLQEMMRNGH 580

Query: 599 IPDE 602
            P+E
Sbjct: 581 TPNE 584



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 85/169 (50%), Gaps = 7/169 (4%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL------PNFLSFNIA 191
            LE +  + + G  P+T   N V++ L K+ ++D  +++L+E Q       P+ +++++ 
Sbjct: 427 ALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMI 486

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           +  L K+       D++  M+  G  P+   +  L+      G+++ A +LL  M+  G 
Sbjct: 487 IHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGI 546

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
               + +  L+    R   +D A  L ++M++NG +PN  T+ ++ KGF
Sbjct: 547 FPDDHTYGTLVQILCR-SDVDAAWDLLQEMMRNGHTPNEFTFKAVEKGF 594


>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 115/456 (25%), Positives = 207/456 (45%), Gaps = 19/456 (4%)

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
           +D   V+ + G    KGF   V     L+  F  +G + E   +   M   G   S+  +
Sbjct: 169 SDFDRVRCIFGEFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWRRMKESGIEPSLYTF 228

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
             L++G      ++ A  ++E M      P+VV+Y ++IKG+ +A     A      +E 
Sbjct: 229 NFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEK 288

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE--LKLVPDSYTFCSLLSTVCLSGR- 375
               PD + +  LI      G++D  L +Y  + E  L++ P +Y+   ++  +C  GR 
Sbjct: 289 RNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSL--VIGGLCKDGRT 346

Query: 376 ------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
                 F  + K  C    +A++ +Y AL+  + K G  N+A+ L+  M  +GF PD+ +
Sbjct: 347 VEGSSVFENMNKKGC----KANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVT 402

Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
           +  ++ GLC + ++DEA+  ++    N  AVNA  +++++D L +AGR  +A + F   +
Sbjct: 403 YGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMV 462

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
               P D   Y   I  L + G+ EEA +L+ +M+        YTY +++    KE   +
Sbjct: 463 ERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISGLFKEHRNE 522

Query: 550 MVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGL 609
              +L   +ID  I     +   L+  +      + A   L E+  +G+IP+  +  +  
Sbjct: 523 EALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARACKILDELAPMGVIPETAFEDMIN 582

Query: 610 L---SDETMTPVSLFDGFVPCERR-AGNANHLLLNG 641
           +   +  T     L DG V   R   G    +L+N 
Sbjct: 583 VLCKAGRTEQACKLADGIVDRGREVPGRVRTILINA 618



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 111/525 (21%), Positives = 222/525 (42%), Gaps = 43/525 (8%)

Query: 44  FPIILAPHIV----HSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGR 99
           F I L+P+ V     S  +    D IA  FF W  KQ++Y H ++ +  +I V++ L+  
Sbjct: 113 FLIKLSPNFVAFVLKSDAIRGKPD-IAFRFFWWAGKQKNYIHKIECYVSLIDVLS-LSSD 170

Query: 100 FETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNI 159
           F+ VR I GE    G ++        +R +    M   +L  +  M   G  P+ +  N 
Sbjct: 171 FDRVRCIFGEFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNF 230

Query: 160 VMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG 215
           +++ L     ++   +V +  +     P+ +S+N  +   CK  +     +    M ++ 
Sbjct: 231 LLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRN 290

Query: 216 FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAG 275
             P+   +  L+      G       L   M   G  +  +A++++I G  +  R     
Sbjct: 291 LEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGS 350

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
            ++E M + GC  NV  YT+LI  + +    + A +  + ++ EG  PD V + V+++ L
Sbjct: 351 SVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGL 410

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVY 395
            K G  D+A++ ++             FC                      EV  + + Y
Sbjct: 411 CKSGRLDEAVEYFE-------------FCK-------------------DNEVAVNAMFY 438

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
           ++L+    KAG  ++A K +  M+++G   D+Y +  L+  L  + K++EA+ +++ +  
Sbjct: 439 SSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEK 498

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
                  + +T ++  L +  R  +A++L+   I +       S+     GL   G+   
Sbjct: 499 EGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVAR 558

Query: 516 AYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
           A  +  ++  + V P    +  M+   CK    +   +L   ++D
Sbjct: 559 ACKILDELAPMGVIPET-AFEDMINVLCKAGRTEQACKLADGIVD 602



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 74/308 (24%), Positives = 141/308 (45%), Gaps = 6/308 (1%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL--- 177
           T+L  ++  +    +   L  + EM   G      A ++V+  L K GR   G  V    
Sbjct: 297 TYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENM 356

Query: 178 -KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
            K+    N   +   +    K  +V+   ++   M  +GF P+   + +++N  CK GR+
Sbjct: 357 NKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRL 416

Query: 237 AEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSL 296
            EA +          +++   ++ LIDG  +  R+D A   +E+MV+ GC  +   Y +L
Sbjct: 417 DEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNAL 476

Query: 297 IKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
           I    ++     A      +E EG    +  + +LI  L K    ++AL ++D +++  +
Sbjct: 477 IDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGI 536

Query: 357 VPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADL--VVYNALLSYFCKAGFPNQAVKL 414
            P + +F +L   +CLSG+ +   K++  L     +    +  +++  CKAG   QA KL
Sbjct: 537 TPTTASFRALSVGLCLSGKVARACKILDELAPMGVIPETAFEDMINVLCKAGRTEQACKL 596

Query: 415 YNTMLDKG 422
            + ++D+G
Sbjct: 597 ADGIVDRG 604



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 44/213 (20%), Positives = 83/213 (38%), Gaps = 7/213 (3%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
           A+ +F +C K  +   +   +  +I  + +  GR +       E+   GC   +  +   
Sbjct: 419 AVEYFEFC-KDNEVAVNAMFYSSLIDGLGK-AGRVDEAEKFFEEMVERGCPQDSYCYNAL 476

Query: 126 LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV----LKETQ 181
           +    +       L  F  M + G     +   I++  LFK  R +  +K+    + +  
Sbjct: 477 IDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGI 536

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
            P   SF      LC    V+    ++  +   G  P    FE ++N  CK GR  +A +
Sbjct: 537 TPTTASFRALSVGLCLSGKVARACKILDELAPMGVIPET-AFEDMINVLCKAGRTEQACK 595

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           L   ++  G  +     T+LI+  R+    D+A
Sbjct: 596 LADGIVDRGREVPGRVRTILINALRKAGNADLA 628


>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
 gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
          Length = 1035

 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 108/461 (23%), Positives = 214/461 (46%), Gaps = 42/461 (9%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFL 186
           + +++      F +M   G  PN    N ++     IG+    +++L+E       PN  
Sbjct: 250 KAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCC 309

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           ++   L  LCK       +     M+ KG  P+V  + I+L+ +   G ++E + LL LM
Sbjct: 310 TYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLM 369

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
           +  G S + + + +    + +   +D A  ++ KM Q G SP+ V+Y +LI    +    
Sbjct: 370 VANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRV 429

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
             A    + + +EG  PD+V  + L+  L  +  ++   +++  +L + + P+   F ++
Sbjct: 430 DDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTI 489

Query: 367 LSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           L  +C  GR     +LV  +E   V  D++ YN L+   C AG  ++A KL   M+  G 
Sbjct: 490 LCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGL 549

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN--NPAV--------------------- 460
            PD++S+  LL G C A +ID A + ++ ++ N   P V                     
Sbjct: 550 KPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKE 609

Query: 461 ------------NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
                       + + +  I++ L ++    +AI++F+    +   L+++++ + I  LL
Sbjct: 610 LYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALL 669

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
           +GGR E+A  L++ +    +  N  TYR+++ +  +E +++
Sbjct: 670 KGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLE 710



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 145/598 (24%), Positives = 254/598 (42%), Gaps = 77/598 (12%)

Query: 122 FLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD---------- 171
           F +F   Y +  +    ++ F++M + G +P+  +   ++D L K+GRVD          
Sbjct: 381 FNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMI 440

Query: 172 -----------------------------LGIKVLKETQLPNFLSFNIALCNLCKLNDVS 202
                                        L  ++L     PN + FN  LCNLCK   V 
Sbjct: 441 NEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVM 500

Query: 203 NVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLI 262
             + ++  +   G  P+V  +  L++  C  G I EA +LL  M+++G      ++  L+
Sbjct: 501 EGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLL 560

Query: 263 DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS-FLDMLESEGH 321
            G+ +  R+D A   + KM+ NG +P VVTY +++ G  + K FS A   +L+M+ S G 
Sbjct: 561 HGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINS-GT 619

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPK 381
             D+  +N++++ L K    D+A+ ++  L    L  +  TF  ++  +   GR      
Sbjct: 620 KWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMD 679

Query: 382 LVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL- 437
           L   +       ++V Y  ++    + G   +   L++ M   G  P++     L+R L 
Sbjct: 680 LFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLL 739

Query: 438 -------CGA--RKIDE-----------------AINVYQGIVMNNPAVNAHVHTAIVDR 471
                   GA   K+DE                 + + YQ    + P     ++ A    
Sbjct: 740 HRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSA 799

Query: 472 LI-EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
           LI +A R   A  LFR  +++    DVV+Y   + GL + GR  EA  LY  M +     
Sbjct: 800 LIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQM 859

Query: 531 NAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQL 590
           N YTY ++L   CK   +    ++ Q +    ++L+  T   +   + K      A++  
Sbjct: 860 NIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLF 919

Query: 591 VEMCNLGLIPDEMWRKLGLLSDETMTPVSL--FDG-FVPCERRAGNANHLLLNGGVGR 645
             +   GL+PD +  +  L+++  +   SL  FDG F+  E+     +  LLN  V R
Sbjct: 920 AAIPANGLVPDVVTYR--LVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRR 975



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 120/539 (22%), Positives = 235/539 (43%), Gaps = 22/539 (4%)

Query: 83  VQSFDHMISVVTRLTGR------FETVRGIVGELARVGCVIKAQ----TFLLFLRIYWRG 132
           V +F+H+++ V+R +GR       ETV  +   + R  C IK      T+ + +  + R 
Sbjct: 49  VVAFNHLLAAVSRSSGRRSTTSESETVVSLFNRMVR-DCYIKVAPNRCTYSILIGCFCRM 107

Query: 133 EMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ-----LPNFLS 187
                   AF  + + G+  +    N +++ L    RV   + VL +       +P+ +S
Sbjct: 108 GHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVS 167

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFY---PNVRMFEILLNCFCKMGRIAEAYQLLG 244
           +NI L  LC         +++ MM     +   PNV  +  ++N F   G++ + Y L  
Sbjct: 168 YNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFL 227

Query: 245 LMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
            M+  G    V  +T +IDG  + +  D A  ++++M+ NG  PN+ TY  LI G++   
Sbjct: 228 EMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIG 287

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
            +      L+ + + G  P+   +  L++ L K G   +A   +D ++   + P   T+ 
Sbjct: 288 KWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYG 347

Query: 365 SLLSTVCLSGRFSL---LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
            +L      G  S    L  L+    +  +  ++N   S + K G  ++A+ ++N M  +
Sbjct: 348 IMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQ 407

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
           G +PD  S+  L+  LC   ++D+A   +  ++      +  V +++V  L    +  K 
Sbjct: 408 GLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKV 467

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
            +LF   +      ++V +   +  L + GR  E   L   ++ + V P+  +Y  ++  
Sbjct: 468 EELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDG 527

Query: 542 FCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
            C    I    +LL+ ++   ++ D  +   L     K     SA +   +M + G+ P
Sbjct: 528 HCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITP 586



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 115/537 (21%), Positives = 228/537 (42%), Gaps = 43/537 (8%)

Query: 152 PNTFARNIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDV 207
           PN  + + V++  F  G+VD    L ++++     P+ +++   +  LCK       + V
Sbjct: 201 PNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAV 260

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
              M+  G  PN+  +  L++ +  +G+  E  ++L  M   G   +   +  L++   +
Sbjct: 261 FQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCK 320

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
             R   A + ++ M+  G  P+V TY  ++ G+      S     L+++ + G +P+   
Sbjct: 321 NGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHI 380

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR------------ 375
            N+     +K G  D A+D+++ + +  L PD+ ++ +L+  +C  GR            
Sbjct: 381 FNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMI 440

Query: 376 ----------FSLLPKLVCGLE----------------VEADLVVYNALLSYFCKAGFPN 409
                     FS L   +C ++                +  ++V +N +L   CK G   
Sbjct: 441 NEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVM 500

Query: 410 QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
           +  +L +++   G  PD  S+  L+ G C A  IDEA  + +G+V      ++  +  ++
Sbjct: 501 EGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLL 560

Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
               +AGR   A   FR+ +       VV+Y   + GL +  R  EA  LY  M +    
Sbjct: 561 HGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTK 620

Query: 530 PNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQ 589
            + YTY ++L   CK   +    ++ Q++    ++L+  T   +   + K      A++ 
Sbjct: 621 WDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDL 680

Query: 590 LVEMCNLGLIPDEMWRKLGLLSDETMTPVSLFDGFVPCERRAGNA-NHLLLNGGVGR 645
              +   GL+ + +  +L + +      +  FD       + G A N  +LN  V R
Sbjct: 681 FAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRR 737



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 111/495 (22%), Positives = 207/495 (41%), Gaps = 46/495 (9%)

Query: 134  MYGMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFL 186
            + G + EA    + M   G  P++F+ N ++    K GR+D       K+L     P  +
Sbjct: 530  LAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVV 589

Query: 187  SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
            ++N  L  L +    S  K++   M+  G   ++  + I+LN  CK   + EA ++   +
Sbjct: 590  TYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNL 649

Query: 247  ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
             + G  L++  + ++I    +  R + A  L+  +  NG   NVVTY  +++  +E    
Sbjct: 650  CSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSL 709

Query: 307  SIAFSFLDMLESEGHAPDLVFHNVLIDCL------SKMGSYDDALDVYDGLLEL------ 354
                S    +E  G AP+    N L+  L      S+ G+Y   LD  +  +E       
Sbjct: 710  EEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSML 769

Query: 355  -------------KLVPDSYTFCSLLSTVCLSGR-------FSLLPK-LVCGLEVEADLV 393
                         K +P  Y   +  ++  L  +       +SL  + L+ GL    D+V
Sbjct: 770  ISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLT--PDVV 827

Query: 394  VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
             YN +L    + G  ++A +LY +M++     + Y++  +L GLC +  +DEA  ++Q +
Sbjct: 828  TYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSL 887

Query: 454  VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
                  +N      ++  L++ GR   A+ LF          DVV+Y +    L+E G  
Sbjct: 888  CSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSL 947

Query: 514  EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
            EE   L+  M+    P ++     ++    +  +I      L  + +    L+  T+  L
Sbjct: 948  EEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSEL 1007

Query: 574  TKFI----FKFHSSS 584
                    ++ H+ S
Sbjct: 1008 ISLFSRGEYQHHAKS 1022



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 74/342 (21%), Positives = 148/342 (43%), Gaps = 24/342 (7%)

Query: 277 LWEKMVQN---GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           L+ +MV++     +PN  TY+ LI  F         F+   ++   G   D +  N L++
Sbjct: 78  LFNRMVRDCYIKVAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLN 137

Query: 334 CLSKMGSYDDALDV-YDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEAD- 391
            L       +A+DV    + EL  +PD+ ++  LL  +C   R     +L   L + AD 
Sbjct: 138 GLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALEL---LHMMADD 194

Query: 392 --------LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
                   +V Y+ +++ F   G  ++   L+  M+D+G  PD  ++  ++ GLC A+  
Sbjct: 195 QVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLF 254

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           D A  V+Q ++ N    N   +  ++   +  G+  + +++           +  +Y   
Sbjct: 255 DRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSL 314

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           +  L + GR  EA   +  M    + P+  TY +ML  +  +  +  +  LL  ++   I
Sbjct: 315 LNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGI 374

Query: 564 ELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCN----LGLIPD 601
             ++H    +    F  ++    +++ +++ N     GL PD
Sbjct: 375 SPNHH----IFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPD 412



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 118/279 (42%), Gaps = 23/279 (8%)

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLS-GR----------FSLLPKLV--CGLEVE 389
           DAL ++D LL          F  LL+ V  S GR           SL  ++V  C ++V 
Sbjct: 32  DALKLFDELLPHARPASVVAFNHLLAAVSRSSGRRSTTSESETVVSLFNRMVRDCYIKVA 91

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            +   Y+ L+  FC+ G        +  +L  G+  D+     LL GLC  +++ EA++V
Sbjct: 92  PNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDV 151

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEA----GRCHKAIQLFRRAIVEKY---PLDVVSYTV 502
              ++   P +     T   + L++      R  +A++L      ++    P +VVSY+ 
Sbjct: 152 ---LLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYST 208

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
            I G    G+ ++ Y L+ +M    +PP+  TY  ++   CK +     + + Q +ID  
Sbjct: 209 VINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNG 268

Query: 563 IELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           ++ +  T   L             V  L EM   G  P+
Sbjct: 269 VKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPN 307


>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
          Length = 579

 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 105/481 (21%), Positives = 213/481 (44%), Gaps = 16/481 (3%)

Query: 79  YFHDVQ---------SFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIY 129
           +FH+++         S+  MI V+ +  GR      +  ++     V  A  +   +  Y
Sbjct: 5   FFHELKAQGLKPDDVSYTSMIWVLCK-AGRLGEAEELFAQMEAERSVPCAYAYNTMIMGY 63

Query: 130 WRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI---KVLKETQLPNFL 186
                +    +  + +   G  P+  + N ++  L K  +VD  +   +V+K+   PN  
Sbjct: 64  GSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSS 123

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           ++NI +  LC    V     ++  M     +PN+    I+++  CK  ++ EAY++    
Sbjct: 124 TYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESA 183

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
              G +     +  LIDG  +  ++D A  L+EKM+  G + N V YTSLI+ F      
Sbjct: 184 SQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRK 243

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
                    L   G  PDL   N  +DC+ K G  +    +++ +     +PD  ++  L
Sbjct: 244 EDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSIL 303

Query: 367 LSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           +  +  +G+      +   ++ +    D   YNA++  FCK+G  ++A ++   M +K  
Sbjct: 304 IHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCV 363

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
            P   ++  ++ GL    ++DEA  +++        +N  ++++++D   + GR  +A  
Sbjct: 364 QPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYL 423

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           +    + +    +V ++   +  L++     EA + +  MK +  PPN YTY +++   C
Sbjct: 424 ILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLC 483

Query: 544 K 544
           +
Sbjct: 484 R 484



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 108/485 (22%), Positives = 217/485 (44%), Gaps = 43/485 (8%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
            GRFE    ++  L   GC+    +F   L    +       L  F+ M +    PN+  
Sbjct: 66  AGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSST 124

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            NI++D+L   GRV+   ++L E +     PN L+ NI +  LCK   +     +     
Sbjct: 125 YNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESAS 184

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
           ++G  P+   +  L++   K G++ EAY+L   M+  G + +   +T LI  F    R +
Sbjct: 185 QRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKE 244

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
               +++++++ GC P++    + +    +A          + + S G  PD+  +++LI
Sbjct: 245 DGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILI 304

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKL------ 382
             L+K G   +  +++  + +     D+  + +++   C SG+    + +L ++      
Sbjct: 305 HGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQ 364

Query: 383 ---------VCGLE-------------------VEADLVVYNALLSYFCKAGFPNQAVKL 414
                    V GL                    +E ++V+Y++L+  F K G  ++A  +
Sbjct: 365 PTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLI 424

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
              M+ KG TP+ Y++  LL  L  A +I+EA+  +Q +       N + ++ +++ L  
Sbjct: 425 LEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCR 484

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
             + +KA   ++    +    +VV+YT  I GL + G   +AY L+ + K     P+A +
Sbjct: 485 VQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAAS 544

Query: 535 YRVML 539
           +  ++
Sbjct: 545 FNALI 549



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 153/312 (49%), Gaps = 7/312 (2%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           F E+ R G  P+    N  MD +FK G V+ G  + ++ +    LP+  S++I +  L K
Sbjct: 250 FKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTK 309

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
                   ++   M ++GF  + R +  +++ FCK G++ +AY++L  M       +V  
Sbjct: 310 AGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVAT 369

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  ++DG  ++ RLD A  L+E+    G   NVV Y+SLI GF +      A+  L+ + 
Sbjct: 370 YGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMM 429

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
            +G  P++   N L+D L K    ++AL  +  + E+K  P++YT+  L++ +C   +++
Sbjct: 430 KKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYN 489

Query: 378 LLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
                   ++ +    ++V Y  ++S   K G    A  L+      G  PD  SF  L+
Sbjct: 490 KAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALI 549

Query: 435 RGLCGARKIDEA 446
            G+  A +  EA
Sbjct: 550 EGMSNANRAMEA 561



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 102/462 (22%), Positives = 199/462 (43%), Gaps = 16/462 (3%)

Query: 137 MVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIAL 192
           M  + F E+   G  P+  +   ++ VL K GR+    +L  ++  E  +P   ++N  +
Sbjct: 1   MAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMI 60

Query: 193 CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
                     +   ++  +  +G  P+V  F  +L C  K  ++ EA  L  +M      
Sbjct: 61  MGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEP 120

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
            S + + ++ID      R++ A  + ++M      PN++T   ++    +A+    A+  
Sbjct: 121 NS-STYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKI 179

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
            +     G  PD V +  LID L K G  D+A  +++ +L+     +   + SL+    +
Sbjct: 180 FESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFI 239

Query: 373 SGR-------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
            GR       F  L +  C    + DL + N  +    KAG   +   ++  +   GF P
Sbjct: 240 HGRKEDGHKIFKELIRRGC----KPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLP 295

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           D  S+  L+ GL  A +  E  N++  +     A++A  + A+VD   ++G+ HKA ++ 
Sbjct: 296 DVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEIL 355

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
                +     V +Y   + GL +  R +EAY+L+ + K   +  N   Y  ++  F K 
Sbjct: 356 EEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKV 415

Query: 546 RNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAV 587
             I     +L++++   +  + +T   L   + K    + A+
Sbjct: 416 GRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEAL 457



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 92/389 (23%), Positives = 163/389 (41%), Gaps = 39/389 (10%)

Query: 136 GMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE----TQLPNFLSF 188
           G V EA   F++M   G   N      ++   F  GR + G K+ KE       P+    
Sbjct: 206 GQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLL 265

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           N  +  + K  +V   + +   +   GF P+VR + IL++   K G+  E   +   M  
Sbjct: 266 NTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQ 325

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
            G +L   A+  ++DGF +  ++  A  + E+M +    P V TY +++ G  +      
Sbjct: 326 QGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDE 385

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A+   +  +S+G   ++V ++ LID   K+G  D+A  + + +++  L P+ YT      
Sbjct: 386 AYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYT------ 439

Query: 369 TVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
                                     +N+LL    KA   N+A+  + +M +    P+ Y
Sbjct: 440 --------------------------WNSLLDALVKAEEINEALVCFQSMKEMKCPPNTY 473

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
           ++  L+ GLC  +K ++A   +Q +       N   +T ++  L + G    A  LF R 
Sbjct: 474 TYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERF 533

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAY 517
                  D  S+   I G+    R  EAY
Sbjct: 534 KANGGIPDAASFNALIEGMSNANRAMEAY 562


>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
 gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
          Length = 1139

 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 126/476 (26%), Positives = 219/476 (46%), Gaps = 13/476 (2%)

Query: 137 MVLEAFD---EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFN 189
           +V EAF    ++G  G  PN FA N ++D L K  R D   ++ KE       PN +++ 
Sbjct: 318 LVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYA 377

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
           I +  LCK   + +   +   M  KG    V  +  L+N +CK G +  A  LL  M+  
Sbjct: 378 ILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKE 437

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           G + +  +++ LI G  R   L     L  +M + G + N  T+T+LI GF + K    A
Sbjct: 438 GLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEA 497

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
               D +      P+ V  NV+I+    +G+   A  +YD ++E+ L PD+YT+ SL+S 
Sbjct: 498 ARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 557

Query: 370 VCLSGRFSLLPKLVCGLEVEADLVVYN----ALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
           +CL+   S   + V  LE  +  V+ N    ALL  F + G   +   L++ M  +G   
Sbjct: 558 LCLTSGVSKANEFVADLE-NSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKL 616

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           D  SF  ++         +++  +++ +       +   +T ++D L +     +A+  +
Sbjct: 617 DLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCW 676

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
            + +V+ Y  + V++TV I  L + G    A +L  +M    V PN +TY   L  F  E
Sbjct: 677 DQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATE 736

Query: 546 RNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            +++  K L   ++   +      +I L K + K      A++ + ++   G  PD
Sbjct: 737 GDMEKAKDLHSAMLQGHLASIVSFNI-LIKGLCKAGKIQEAIDLMSKITESGFSPD 791



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 109/449 (24%), Positives = 206/449 (45%), Gaps = 8/449 (1%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G  +  RG++  + + G    A ++   +    R       +E   EM   G   N +  
Sbjct: 422 GSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTF 481

Query: 158 NIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
             +++   K  ++D    L  K++    +PN ++FN+ +   C + ++     +   MV 
Sbjct: 482 TALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVE 541

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G  P+   +  L++  C    +++A + +  +      L+  + T L+ GF R  R   
Sbjct: 542 MGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTE 601

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
             +LW++M   G   ++V++T ++   ++      +      ++ +G  PD +F+  +ID
Sbjct: 602 TYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMID 661

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF---SLLPKLVCGLEVEA 390
            LSK  +   AL+ +D ++     P++ T   L++ +C SG      LL K +    V  
Sbjct: 662 ALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLP 721

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           +   YN  L YF   G   +A  L++ ML +G      SF  L++GLC A KI EAI++ 
Sbjct: 722 NKFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLM 780

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
             I  +  + +   ++ I+  L + G  +KA +L+   + +    DVV+Y + IR     
Sbjct: 781 SKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVH 840

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVML 539
           G +++A  +Y+ M    V PN  TYR +L
Sbjct: 841 GESDKALGIYTNMIRSGVQPNWDTYRALL 869



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 112/493 (22%), Positives = 204/493 (41%), Gaps = 44/493 (8%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           +F   R +  ++ + G  +    +   +R Y               M   G   +    N
Sbjct: 178 QFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYN 237

Query: 159 IVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
           ++M  L K  RV   ++V    +      + +++   +   C++ ++     +   M+R 
Sbjct: 238 VLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRL 297

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           GF P+      +++   K   + EA+ L   +  LG   +V A+  LID   +  R D A
Sbjct: 298 GFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDA 357

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             L+++M   G  PN VTY  LI    +  M   A    D +  +G    +  +N LI+ 
Sbjct: 358 DRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLING 417

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----------------- 377
             K GS D A  +  G+++  L P + ++  L++ +C +G  S                 
Sbjct: 418 YCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWN 477

Query: 378 --LLPKLVCGL-------------------EVEADLVVYNALLSYFCKAGFPNQAVKLYN 416
                 L+ G                     V  + V +N ++  +C  G   +A +LY+
Sbjct: 478 NYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYD 537

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV-NAHVHTAIVDRLIEA 475
            M++ G  PDNY++  L+ GLC    + +A N +   + N+ AV N    TA++      
Sbjct: 538 QMVEMGLKPDNYTYRSLISGLCLTSGVSKA-NEFVADLENSYAVLNNFSLTALLYGFFRE 596

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
           GR  +   L+    V    LD+VS+T+ +   L+    E++ +L+ +MK   V P+   Y
Sbjct: 597 GRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFY 656

Query: 536 RVMLLSFCKERNI 548
             M+ +  KE N+
Sbjct: 657 TCMIDALSKEENM 669



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 101/440 (22%), Positives = 189/440 (42%), Gaps = 3/440 (0%)

Query: 168 GRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILL 227
           G   L +++  E    + + +N+ +  LCK   V    +V  +MV  G   +   +  L+
Sbjct: 216 GARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLV 275

Query: 228 NCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCS 287
             FC+M  +  A ++   MI LG   S    + +ID  R+   ++ A  L  K+   G  
Sbjct: 276 YGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMV 335

Query: 288 PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
           PNV  Y +LI    + + F  A      +   G  P+ V + +LI  L K G  +DAL +
Sbjct: 336 PNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCL 395

Query: 348 YDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCK 404
           +D + +  +    Y + SL++  C  G       L+ G+  E        Y+ L++  C+
Sbjct: 396 FDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCR 455

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV 464
            G  +  ++L+  M ++G   +NY+F  L+ G C  +K+DEA  ++  ++ +N   N   
Sbjct: 456 NGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVT 515

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
              +++     G   KA QL+ + +      D  +Y   I GL       +A    + ++
Sbjct: 516 FNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLE 575

Query: 525 HIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSS 584
           +     N ++   +L  F +E        L  ++    ++LD  +   +     K H   
Sbjct: 576 NSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKE 635

Query: 585 SAVNQLVEMCNLGLIPDEMW 604
            +     EM   G+ PD+++
Sbjct: 636 KSCVLFREMKEQGVKPDDIF 655



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/381 (23%), Positives = 170/381 (44%), Gaps = 3/381 (0%)

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           L +L K+   +  +D+   M++ G + +  ++   +  +C+   +  A  L+  M + G 
Sbjct: 170 LFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGV 229

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
             S   + VL+ G  +  R+  A  +   MV  G + + VTY +L+ GF   +   +A  
Sbjct: 230 KASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALR 289

Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
               +   G  P     + +ID L K    ++A  +   L +L +VP+ + + +L+  +C
Sbjct: 290 ITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLC 349

Query: 372 LSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
            + RF    +L   + G  +E + V Y  L+   CK G    A+ L++ M DKG     Y
Sbjct: 350 KNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVY 409

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
            +  L+ G C    +D A  +  G+V       A  ++ ++  L   G     ++L R  
Sbjct: 410 PYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREM 469

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
                  +  ++T  I G  +  + +EA  L+ +M    V PN  T+ VM+  +C   NI
Sbjct: 470 AERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNI 529

Query: 549 KMVKRLLQDVIDARIELDYHT 569
           +   +L   +++  ++ D +T
Sbjct: 530 RKAFQLYDQMVEMGLKPDNYT 550



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 88/401 (21%), Positives = 173/401 (43%), Gaps = 48/401 (11%)

Query: 245 LMITLGTSLSVNAWTV--LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           L ++L + ++VN +T   ++    ++R+  +A  L++KM+Q+G   +   YT+ I+ + E
Sbjct: 151 LGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCE 210

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
           ++    A   +  +ESEG     V +NVL+  L K     +A++V + ++ + +  D  T
Sbjct: 211 SRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVT 270

Query: 363 FCSLLSTVC---------------------------------------LSGRFSLLPKLV 383
           + +L+   C                                       +   FSL  KL 
Sbjct: 271 YRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKL- 329

Query: 384 CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
             L +  ++  YNAL+   CK    + A +L+  M  +G  P+  ++  L+  LC    I
Sbjct: 330 GDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMI 389

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           ++A+ ++  +      V  + + ++++   + G   +A  L    + E       SY+  
Sbjct: 390 EDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPL 449

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           I GL   G       L+ +M    +  N YT+  ++  FCK++ +    RL   +ID+ +
Sbjct: 450 IAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNV 509

Query: 564 ---ELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
              E+ ++  I     +     +    +Q+VEM   GL PD
Sbjct: 510 IPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEM---GLKPD 547



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/279 (22%), Positives = 126/279 (45%), Gaps = 5/279 (1%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GRF     +  E+A  G  +   +F + +    +          F EM   G  P+    
Sbjct: 597 GRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFY 656

Query: 158 NIVMDVLFK----IGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
             ++D L K    I  ++   +++ +   PN ++  + + NLCK   + + + +   M+ 
Sbjct: 657 TCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLA 716

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
               PN   +   L+ F   G + +A  L   M+  G   S+ ++ +LI G  +  ++  
Sbjct: 717 GNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQE 775

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L  K+ ++G SP+ ++Y+++I    +    + AF   + +  +G  PD+V +N+ I 
Sbjct: 776 AIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIR 835

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
             +  G  D AL +Y  ++   + P+  T+ +LLS + L
Sbjct: 836 WCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISL 874



 Score = 45.8 bits (107), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 40/184 (21%), Positives = 71/184 (38%), Gaps = 35/184 (19%)

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
           L  G T + Y+   +L  L   R+   A +++  ++ +   ++ +V+TA +    E+   
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
             A  L  R   E      V Y V + GL +  R +EA  + + M +I V  +  TYR +
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGL 598
           +  FC+   ++M  R+  D+I                                    LG 
Sbjct: 275 VYGFCRMEELEMALRITHDMI-----------------------------------RLGF 299

Query: 599 IPDE 602
           +P E
Sbjct: 300 VPSE 303



 Score = 41.2 bits (95), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 28/121 (23%), Positives = 56/121 (46%), Gaps = 4/121 (3%)

Query: 158 NIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           NI++  L K G++    DL  K+ +    P+ +S++  +  LCK+ D++   ++   M+ 
Sbjct: 761 NILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLY 820

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           KG  P+V  + I +      G   +A  +   MI  G   + + +  L+ G   +   D 
Sbjct: 821 KGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMLHYDF 880

Query: 274 A 274
           +
Sbjct: 881 S 881


>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial; Flags: Precursor
 gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 974

 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 106/425 (24%), Positives = 199/425 (46%), Gaps = 13/425 (3%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLS-----FNIALCNLCKL 198
           EM   G + +    ++++D L K GR     K L    + + ++     ++  +C + K 
Sbjct: 302 EMDSLGVSLDNHTYSLLIDGLLK-GRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKE 360

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
             +   K +   M+  G  P  + +  L+  +C+   + + Y+LL  M      +S   +
Sbjct: 361 GVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTY 420

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
             ++ G      LD A  + ++M+ +GC PNVV YT+LIK F++   F  A   L  ++ 
Sbjct: 421 GTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKE 480

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL 378
           +G APD+  +N LI  LSK    D+A      ++E  L P+++T+ + +S    +  F+ 
Sbjct: 481 QGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFAS 540

Query: 379 LPKLV-----CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
             K V     CG  V  + V+   L++ +CK G   +A   Y +M+D+G   D  ++  L
Sbjct: 541 ADKYVKEMRECG--VLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVL 598

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           + GL    K+D+A  +++ +     A +   +  +++   + G   KA  +F   + E  
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL 658

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
             +V+ Y + + G    G  E+A  L  +M    + PNA TY  ++  +CK  ++    R
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFR 718

Query: 554 LLQDV 558
           L  ++
Sbjct: 719 LFDEM 723



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 120/549 (21%), Positives = 235/549 (42%), Gaps = 62/549 (11%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           +G  +    IV E+   GC      +   ++ + +   +G  +    EM   G  P+ F 
Sbjct: 430 SGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFC 489

Query: 157 RNIVMDVLFKIGRVDLG----IKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N ++  L K  R+D      +++++    PN  ++   +    + ++ ++    +  M 
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR 549

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEA------------------YQLL--GL------- 245
             G  PN  +   L+N +CK G++ EA                  Y +L  GL       
Sbjct: 550 ECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVD 609

Query: 246 --------MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLI 297
                   M   G +  V ++ VLI+GF +L  +  A  ++++MV+ G +PNV+ Y  L+
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669

Query: 298 KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
            GF  +     A   LD +  +G  P+ V +  +ID   K G   +A  ++D +    LV
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729

Query: 358 PDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE-----ADLVVYNALLSYFCKAGFPNQAV 412
           PDS+ + +L+   C   R + + + +           +    +NAL+++  K G      
Sbjct: 730 PDSFVYTTLVDGCC---RLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKT 786

Query: 413 KLYNTMLDKGF----TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAI 468
           ++ N ++D  F     P++ ++  ++  LC    ++ A  ++  +   N       +T++
Sbjct: 787 EVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSL 846

Query: 469 VDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM-KHIA 527
           ++   + GR  +   +F  AI      D + Y+V I   L+ G T +A +L  QM    A
Sbjct: 847 LNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNA 906

Query: 528 VPP----NAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSS 583
           V      +  T R +L  F K   +++ ++++++++  +   D  T I L       + S
Sbjct: 907 VDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIEL------INES 960

Query: 584 SSAVNQLVE 592
             + NQ VE
Sbjct: 961 CISSNQRVE 969



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 156/682 (22%), Positives = 268/682 (39%), Gaps = 126/682 (18%)

Query: 42  QDFPIILAPHIVHSTL----LNCPSDLIALSFFIWCAKQR------DYFH-------DVQ 84
            +  I + P +V S L    ++ PS L  LSFF W   Q+      D F        +  
Sbjct: 54  SNLSIEINPEVVLSVLRSKRVDDPSKL--LSFFNWVDSQKVTEQKLDSFSFLALDLCNFG 111

Query: 85  SFDHMISVVTRLTGRFETVRGIVGELARVGC--VIKAQTFLLFLRIYWRGEMYGMVLEA- 141
           SF+  +SVV R+  R   V  +   + R     V K+   +LF  ++      G + EA 
Sbjct: 112 SFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAV 171

Query: 142 --FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFL----SFNIALCNL 195
             F         P      +++D L +  R+DL   V K     N +    ++++ +   
Sbjct: 172 FVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAH 231

Query: 196 CKLNDVSNVKDVI---------------------GMMVRKGFYPNVRMFEILLNCFCKMG 234
           C+  +V   KDV+                       M+ KG  P    +++L++  CK+ 
Sbjct: 232 CRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIK 291

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCS------- 287
           R+ +A  LL  M +LG SL  + +++LIDG  + R  D A  L  +MV +G +       
Sbjct: 292 RLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYD 351

Query: 288 ----------------------------PNVVTYTSLIKGF-------------MEAKMF 306
                                       P    Y SLI+G+             +E K  
Sbjct: 352 CCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKR 411

Query: 307 SI----------------------AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
           +I                      A++ +  + + G  P++V +  LI    +   + DA
Sbjct: 412 NIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDA 471

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF----SLLPKLV-CGLEVEADLVVYNALL 399
           + V   + E  + PD + + SL+  +  + R     S L ++V  GL+  A    Y A +
Sbjct: 472 MRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNA--FTYGAFI 529

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
           S + +A     A K    M + G  P+     GL+   C   K+ EA + Y+ +V     
Sbjct: 530 SGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGIL 589

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            +A  +T +++ L +  +   A ++FR    +    DV SY V I G  + G  ++A  +
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSI 649

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK 579
           + +M    + PN   Y ++L  FC+   I+  K LL ++    +  +  T   +     K
Sbjct: 650 FDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709

Query: 580 FHSSSSAVNQLVEMCNLGLIPD 601
               + A     EM   GL+PD
Sbjct: 710 SGDLAEAFRLFDEMKLKGLVPD 731



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 86/366 (23%), Positives = 141/366 (38%), Gaps = 39/366 (10%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV S+  +I+  ++L G  +    I  E+   G       + + L  + R        E 
Sbjct: 626 DVFSYGVLINGFSKL-GNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
            DEM   G  PN      ++D   K G +    ++  E +L    P+   +   +   C+
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL-----GLMITLGTS 252
           LNDV     + G   +KG   +   F  L+N   K G+     ++L     G     G  
Sbjct: 745 LNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKP 803

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
             V  + ++ID   +   L+ A  L+ +M      P V+TYTSL+ G+ +    +  F  
Sbjct: 804 NDV-TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
            D   + G  PD + ++V+I+   K G    AL + D +     V D    C L  + C 
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDG---CKLSISTC- 918

Query: 373 SGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
                                   ALLS F K G    A K+   M+   + PD+ + + 
Sbjct: 919 -----------------------RALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIE 955

Query: 433 LLRGLC 438
           L+   C
Sbjct: 956 LINESC 961


>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
 gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
          Length = 538

 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 124/484 (25%), Positives = 220/484 (45%), Gaps = 11/484 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D Q+F  + + + R +   E VR +   LA  G V    T+ L +       M    LE 
Sbjct: 18  DSQAFTLLATKLFRRSKFSEVVR-LFTLLASRGVVYGETTYKLVVDGLCGAGMANQALEL 76

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCK 197
             E+    +TP  F  N ++  L +  RV    KVL+    E+ +PN  ++ I L  LC+
Sbjct: 77  VRELSGV-YTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCR 135

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            N     ++V   M R G  PN   +  L+    + G I EA +++    +L     V  
Sbjct: 136 SNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVIT 195

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
            T ++ G  +  RLD A    E+M Q G  PN VTY++L+ GF +         F +  +
Sbjct: 196 CTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEK 255

Query: 318 S-EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
           + +G + +   +   +D L K G  D A    + L +  +VPD  T+  L++T   +G+F
Sbjct: 256 ARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQF 315

Query: 377 SLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
               +L+  +    V+ D+V Y+ L++  CK      A +L   M   G  P+  ++  +
Sbjct: 316 DASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSV 375

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           + GLC + K+DE   VY+ ++ +  + +   ++ I++ L +AG    A++LF      + 
Sbjct: 376 MDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSRE 435

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN-AYTYRVMLLSFCKERNIKMVK 552
             D  +Y++ I  L   G+ EEA  +Y  M+      N       ++ + C  +     +
Sbjct: 436 GPDAAAYSMVITSLCRAGKLEEACGMYHGMEVTVAGDNICRALAGLVAALCDAKRTDSAR 495

Query: 553 RLLQ 556
           R+++
Sbjct: 496 RIVE 499



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/286 (22%), Positives = 118/286 (41%), Gaps = 34/286 (11%)

Query: 273 MAGYLWEK-MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           MA  L E+ +V+ G   +   +T L         FS       +L S G       + ++
Sbjct: 1   MAAKLLERSVVEAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLV 60

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEAD 391
           +D L   G  + AL+         LV +            LSG ++              
Sbjct: 61  VDGLCGAGMANQALE---------LVRE------------LSGVYT------------PT 87

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
           + +YN +++  C+A     A K+   M+++   P+ +++  LL GLC + K   A  V+Q
Sbjct: 88  VFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQ 147

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
            +  N    N   +  ++  L  AG   +A+++       + P DV++ T  + GL +  
Sbjct: 148 EMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKAS 207

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
           R ++A     +M+ + V PN  TY  ++  F +   +  V R  ++
Sbjct: 208 RLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEE 253



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 71/360 (19%), Positives = 148/360 (41%), Gaps = 5/360 (1%)

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           ++  G  +   A+T+L     R  +      L+  +   G      TY  ++ G   A M
Sbjct: 10  VVEAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGM 69

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
            + A   +  L S  + P +  +N +I  L +     DA  V + ++E  +VP+ +T+  
Sbjct: 70  ANQALELVREL-SGVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTI 128

Query: 366 LLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
           LL+ +C S +  L  ++   ++    + + + Y  L+ +  +AG  ++A+++        
Sbjct: 129 LLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLE 188

Query: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI 482
              D  +   ++ GLC A ++D+A+   + +       N   ++ +V    + G   + I
Sbjct: 189 LPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVI 248

Query: 483 QLFRRAIVEKY-PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
           + F      K   L+  +Y   +  L + G  + A     +++   V P+  TY +++ +
Sbjct: 249 RFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINT 308

Query: 542 FCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           F +         LL+D+    ++ D  T   L   + K      A   L  M   G  P+
Sbjct: 309 FARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPN 368



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/227 (20%), Positives = 99/227 (43%), Gaps = 3/227 (1%)

Query: 378 LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
           LL + V     + D   +  L +   +    ++ V+L+  +  +G      ++  ++ GL
Sbjct: 5   LLERSVVEAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGL 64

Query: 438 CGARKIDEAINVYQGIV-MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
           CGA   ++A+ + + +  +  P V   ++  I+  L  A R   A ++  + + E    +
Sbjct: 65  CGAGMANQALELVRELSGVYTPTV--FIYNGIITGLCRASRVMDAYKVLEKMVEESIVPN 122

Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
           V +YT+ + GL    +T+ A  ++ +MK     PN  TY  ++    +   I    R++ 
Sbjct: 123 VFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMI 182

Query: 557 DVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           +     +  D  T   +   + K      A+  + EM  +G+ P+E+
Sbjct: 183 EQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEV 229


>gi|224068054|ref|XP_002302657.1| predicted protein [Populus trichocarpa]
 gi|222844383|gb|EEE81930.1| predicted protein [Populus trichocarpa]
          Length = 602

 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 118/541 (21%), Positives = 239/541 (44%), Gaps = 42/541 (7%)

Query: 42  QDFPIILAPHIVHSTLLNC-PSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRF 100
           Q+  ++L   +    L  C  + ++A  FF+W +KQ  Y H  +++  MI V++++  +F
Sbjct: 73  QESGVVLRNGLTERVLNRCGDAGILAYKFFVWASKQPCYRHCYENYKAMIKVLSKMK-QF 131

Query: 101 ETVRGIVGELARVGCV-IKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNI 159
             V  ++ E+ R   V I ++ F++ +R +    M    +E  DEM ++G  P+ +    
Sbjct: 132 GAVWALLEEMRRDNSVLITSEVFVVVMRRFASSRMVNKAIEVLDEMPKYGCEPDEYVFGC 191

Query: 160 VMDVLFKIGRVDLGIKVLKETQL---PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
           ++D L K G V     + ++ ++   P+   F   L   CK   +   K V+  M   GF
Sbjct: 192 LLDALCKNGSVKEAASLFEDMRVRFSPSLKHFTCLLYGWCKEGKLLEAKHVLVQMREAGF 251

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
            P++ ++  LL+ +   G++ +A+ LL  +   G   +  ++T+LI       ++D A  
Sbjct: 252 EPDIVVYNNLLSGYATAGKMGDAFDLLKEIRRKGCDPNATSYTILIQALCGQEKMDEAMR 311

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           ++ +M ++GC  +VVTYT+L+ GF + +M    +  L  +  +GH P+ + +  L+    
Sbjct: 312 VFVEMERSGCDADVVTYTALVSGFCKWRMIDKGYQILQSMIQKGHMPNQLTYLHLMLAHE 371

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYN 396
           K    ++  ++   + ++  +P                                DL +YN
Sbjct: 372 KKEELEECKELMGEMQKIGCIP--------------------------------DLSIYN 399

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            ++   CK G  N  V  +N M   G +P   +FV ++ G  G   + EA   ++ +V  
Sbjct: 400 VVIRLACKLGEVNAGVDAWNEMEVSGLSPGLDTFVIMINGFLGHGYLVEACQYFKEMVER 459

Query: 457 N--PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
               +    +   +++ L+   +   A  L+   + +   L+V S+T+ I  L   G  +
Sbjct: 460 GLLSSRQYGILKDLLNALLRGEKLELAKDLWSCIVTKGCELNVDSWTIWIHALFSNGHVK 519

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLT 574
           EA      M    + P   T+  ++    K  N +    + + V   ++  D H + ++ 
Sbjct: 520 EACSYCLDMMDADLMPKPETFAKLMRGLRKLYNRQFAAEITEKV--RKMAADRHVTFKMY 577

Query: 575 K 575
           K
Sbjct: 578 K 578



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/210 (19%), Positives = 90/210 (42%), Gaps = 1/210 (0%)

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
           V+  ++  F  +   N+A+++ + M   G  PD Y F  LL  LC    + EA ++++ +
Sbjct: 153 VFVVVMRRFASSRMVNKAIEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDM 212

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
            +       H  T ++    + G+  +A  +  +     +  D+V Y   + G    G+ 
Sbjct: 213 RVRFSPSLKHF-TCLLYGWCKEGKLLEAKHVLVQMREAGFEPDIVVYNNLLSGYATAGKM 271

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
            +A+ L  +++     PNA +Y +++ + C +  +    R+  ++  +  + D  T   L
Sbjct: 272 GDAFDLLKEIRRKGCDPNATSYTILIQALCGQEKMDEAMRVFVEMERSGCDADVVTYTAL 331

Query: 574 TKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
                K+         L  M   G +P+++
Sbjct: 332 VSGFCKWRMIDKGYQILQSMIQKGHMPNQL 361


>gi|300681581|emb|CBI75525.1| PPR repeat domain containing protein [Triticum aestivum]
          Length = 728

 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 113/527 (21%), Positives = 238/527 (45%), Gaps = 14/527 (2%)

Query: 84  QSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFD 143
           Q +  +I V   L+  FE       E  +VG  ++   FLL   +     MY  V   FD
Sbjct: 144 QVYATVIRVFVELS-MFEDALVTYVEAKKVGVELQVCNFLLKGLVEGNQIMY--VRSLFD 200

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDL--GIKVLKETQL----PNFLSFNIALCNLCK 197
           +M   G +PN ++ +++M +     ++ L    ++L E ++    PN  ++   L  LC+
Sbjct: 201 DMKISGPSPNIYSYSVLMSMYTHGAKLCLEEAQELLSEMEVEGVRPNAATYGTYLYGLCR 260

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              V +  + + M+ ++G+  N   F  +++ FC  G++ +A ++   M   G    V++
Sbjct: 261 AKQVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHS 320

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +++L+DG  +   +    Y+  +M +NG +PN+V+Y+SL+ G   A    +AF     L+
Sbjct: 321 YSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLK 380

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC----LS 373
            +G   D + +++++    +    +   D+++ ++    VPD+Y + SL+   C    L 
Sbjct: 381 DQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLK 440

Query: 374 GRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
               +   ++C   +  ++V    L+  F   G   +A    + +   G  P+  ++  +
Sbjct: 441 EALEVFELMICD-GICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTYRVI 499

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           + GLC   K ++   ++  ++      +  +++ I+D  ++A    +A +L+ + + E  
Sbjct: 500 INGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGT 559

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
             ++ +YT  I GL    +  E   L+  M    + P+   Y  ++  +CK  N+K    
Sbjct: 560 KPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYTSLIACYCKRSNMKAALE 619

Query: 554 LLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           + +++    +  D      L     K  +   A   + EM N GL P
Sbjct: 620 IFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTP 666



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 104/437 (23%), Positives = 195/437 (44%), Gaps = 36/437 (8%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALC 193
            +E FD M + GF P+  + +I++D L K G V  G  +L E       PN +S++  L 
Sbjct: 302 AVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLH 361

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
            LC+   V    ++   +  +GF  +  ++ I+L+  C+   +   Y L   M+      
Sbjct: 362 GLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVP 421

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
               ++ LI  + R R+L  A  ++E M+ +G  PNVVT T L+ GF    +   AF FL
Sbjct: 422 DAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFL 481

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           D +   G  P+L  + V+I+ L K+   +D   ++  +++   VPD+             
Sbjct: 482 DKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDT------------- 528

Query: 374 GRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
                              V+Y+ ++  F KA    +A +LY  M+D+G  P+ +++  L
Sbjct: 529 -------------------VLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSL 569

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           + GLC   K+ E + +++ ++      +  ++T+++    +      A+++FR    E  
Sbjct: 570 INGLCHDDKLPEVMTLFKHMIGEGLTPDRILYTSLIACYCKRSNMKAALEIFREMETEGL 629

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
             D   YT  I G  +    + A +   +M +  + P   TY  +++ + K  + K    
Sbjct: 630 SADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIIGYFKIGDEKKAMV 689

Query: 554 LLQDVIDARIELDYHTS 570
           +   ++ A I  D   S
Sbjct: 690 MYNSMLQAGIAPDAKLS 706



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 111/470 (23%), Positives = 192/470 (40%), Gaps = 51/470 (10%)

Query: 175 KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
           KV  E Q+ NFL     L  L + N +  V+ +   M   G  PN+  + +L++ +    
Sbjct: 171 KVGVELQVCNFL-----LKGLVEGNQIMYVRSLFDDMKISGPSPNIYSYSVLMSMYTHGA 225

Query: 235 RIA--EAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVT 292
           ++   EA +LL  M   G   +   +   + G  R +++  A    + + Q G   N   
Sbjct: 226 KLCLEEAQELLSEMEVEGVRPNAATYGTYLYGLCRAKQVKSAWNFLQMLCQRGYPCNSYC 285

Query: 293 YTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
           + ++I GF        A    D ++  G  PD+  +++L+D L K G   D L  Y  L+
Sbjct: 286 FNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQG---DVLTGYYMLV 342

Query: 353 ELK---LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAG 406
           E+    + P+  ++ SLL  +C +GR  L  +L   L+ +    D +VY+ +L   C+  
Sbjct: 343 EMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHL 402

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ-----GIVMNNPAVN 461
                  L+N M+   F PD Y++  L+   C  R++ EA+ V++     GI  N     
Sbjct: 403 DLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCT 462

Query: 462 AHVH------------------------------TAIVDRLIEAGRCHKAIQLFRRAIVE 491
             VH                                I++ L +  + +    +F   I  
Sbjct: 463 ILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKR 522

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
            Y  D V Y++ I G ++    +EA+ LY +M      PN +TY  ++   C +  +  V
Sbjct: 523 GYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEV 582

Query: 552 KRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
             L + +I   +  D      L     K  +  +A+    EM   GL  D
Sbjct: 583 MTLFKHMIGEGLTPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSAD 632



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 74/315 (23%), Positives = 134/315 (42%), Gaps = 36/315 (11%)

Query: 116 VIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIK 175
           V  A  +   +  Y R       LE F+ M   G  PN     I++      G +     
Sbjct: 420 VPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFL 479

Query: 176 VLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFC 231
            L + +    +PN  ++ + +  LCK+N  ++V  +   M+++G+ P+  ++ I+++ F 
Sbjct: 480 FLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFV 539

Query: 232 KMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVV 291
           K   + EA++L   M+  GT  ++  +T LI+G     +L     L++ M+  G +P+ +
Sbjct: 540 KALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRI 599

Query: 292 TYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGL 351
            YTSLI  + +      A      +E+EG + D   +  LI   SK+ + D A    + +
Sbjct: 600 LYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEM 659

Query: 352 LELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQA 411
           +   L P   T+  L                               ++ YF K G   +A
Sbjct: 660 MNKGLTPTVVTYTDL-------------------------------IIGYF-KIGDEKKA 687

Query: 412 VKLYNTMLDKGFTPD 426
           + +YN+ML  G  PD
Sbjct: 688 MVMYNSMLQAGIAPD 702


>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 106/425 (24%), Positives = 199/425 (46%), Gaps = 13/425 (3%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLS-----FNIALCNLCKL 198
           EM   G + +    ++++D L K GR     K L    + + ++     ++  +C + K 
Sbjct: 302 EMDSLGVSLDNHTYSLLIDGLLK-GRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKE 360

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
             +   K +   M+  G  P  + +  L+  +C+   + + Y+LL  M      +S   +
Sbjct: 361 GVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTY 420

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
             ++ G      LD A  + ++M+ +GC PNVV YT+LIK F++   F  A   L  ++ 
Sbjct: 421 GTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKE 480

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL 378
           +G APD+  +N LI  LSK    D+A      ++E  L P+++T+ + +S    +  F+ 
Sbjct: 481 QGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFAS 540

Query: 379 LPKLV-----CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
             K V     CG  V  + V+   L++ +CK G   +A   Y +M+D+G   D  ++  L
Sbjct: 541 ADKYVKEMRECG--VLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVL 598

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           + GL    K+D+A  +++ +     A +   +  +++   + G   KA  +F   + E  
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL 658

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
             +V+ Y + + G    G  E+A  L  +M    + PNA TY  ++  +CK  ++    R
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFR 718

Query: 554 LLQDV 558
           L  ++
Sbjct: 719 LFDEM 723



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 120/549 (21%), Positives = 235/549 (42%), Gaps = 62/549 (11%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           +G  +    IV E+   GC      +   ++ + +   +G  +    EM   G  P+ F 
Sbjct: 430 SGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFC 489

Query: 157 RNIVMDVLFKIGRVDLG----IKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N ++  L K  R+D      +++++    PN  ++   +    + ++ ++    +  M 
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR 549

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEA------------------YQLL--GL------- 245
             G  PN  +   L+N +CK G++ EA                  Y +L  GL       
Sbjct: 550 ECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVD 609

Query: 246 --------MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLI 297
                   M   G +  V ++ VLI+GF +L  +  A  ++++MV+ G +PNV+ Y  L+
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669

Query: 298 KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
            GF  +     A   LD +  +G  P+ V +  +ID   K G   +A  ++D +    LV
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729

Query: 358 PDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE-----ADLVVYNALLSYFCKAGFPNQAV 412
           PDS+ + +L+   C   R + + + +           +    +NAL+++  K G      
Sbjct: 730 PDSFVYTTLVDGCC---RLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKT 786

Query: 413 KLYNTMLDKGF----TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAI 468
           ++ N ++D  F     P++ ++  ++  LC    ++ A  ++  +   N       +T++
Sbjct: 787 EVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSL 846

Query: 469 VDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM-KHIA 527
           ++   + GR  +   +F  AI      D + Y+V I   L+ G T +A +L  QM    A
Sbjct: 847 LNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNA 906

Query: 528 VPP----NAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSS 583
           V      +  T R +L  F K   +++ ++++++++  +   D  T I L       + S
Sbjct: 907 VDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIEL------INES 960

Query: 584 SSAVNQLVE 592
             + NQ VE
Sbjct: 961 CISSNQRVE 969



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 154/682 (22%), Positives = 263/682 (38%), Gaps = 126/682 (18%)

Query: 42  QDFPIILAPHIVHSTL----LNCPSDLIALSFFIWCAKQR------DYFH-------DVQ 84
            +  I + P +V S L    ++ PS L  LSFF W   Q+      D F        +  
Sbjct: 54  SNLSIEINPEVVLSVLRSKRVDDPSKL--LSFFNWVDSQKVTEQKLDSFSFLALDLCNFG 111

Query: 85  SFDHMISVVTRLTGRFETVRGIVGELAR-----VGCVIKAQTFLLFLRIYWRGEMYGMVL 139
           SF+  +SVV R+  R   V  +   + R     VG       F +    Y   E     +
Sbjct: 112 SFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKEYIEEAV 171

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFL----SFNIALCNL 195
             F         P      +++D L +  R+DL   V K     N +    ++++ +   
Sbjct: 172 FVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAH 231

Query: 196 CKLNDVSNVKDVI---------------------GMMVRKGFYPNVRMFEILLNCFCKMG 234
           C+  +V   KDV+                       M+ KG  P    +++L++  CK+ 
Sbjct: 232 CRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIK 291

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCS------- 287
           R+ +A  LL  M +LG SL  + +++LIDG  + R  D A  L  +MV +G +       
Sbjct: 292 RLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYD 351

Query: 288 ----------------------------PNVVTYTSLIKGF-------------MEAKMF 306
                                       P    Y SLI+G+             +E K  
Sbjct: 352 CCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKR 411

Query: 307 SI----------------------AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
           +I                      A++ +  + + G  P++V +  LI    +   + DA
Sbjct: 412 NIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDA 471

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF----SLLPKLV-CGLEVEADLVVYNALL 399
           + V   + E  + PD + + SL+  +  + R     S L ++V  GL+  A    Y A +
Sbjct: 472 MRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNA--FTYGAFI 529

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
           S + +A     A K    M + G  P+     GL+   C   K+ EA + Y+ +V     
Sbjct: 530 SGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGIL 589

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            +A  +T +++ L +  +   A ++FR    +    DV SY V I G  + G  ++A  +
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSI 649

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK 579
           + +M    + PN   Y ++L  FC+   I+  K LL ++    +  +  T   +     K
Sbjct: 650 FDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709

Query: 580 FHSSSSAVNQLVEMCNLGLIPD 601
               + A     EM   GL+PD
Sbjct: 710 SGDLAEAFRLFDEMKLKGLVPD 731



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 85/366 (23%), Positives = 142/366 (38%), Gaps = 39/366 (10%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV S+  +I+  ++L G  +    I  E+   G       + + L  + R        E 
Sbjct: 626 DVFSYGVLINGFSKL-GNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
            DEM   G  PN      ++D   K G +    ++  E +L    P+   +   +   C+
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT-----LGTS 252
           LNDV     + G   +KG   +   F  L+N   K G+     ++L  ++       G  
Sbjct: 745 LNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKP 803

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
             V  + ++ID   +   L+ A  L+ +M      P V+TYTSL+ G+ +    +  F  
Sbjct: 804 NDV-TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
            D   + G  PD + ++V+I+   K G    AL + D +     V D    C L  + C 
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDG---CKLSISTC- 918

Query: 373 SGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
                                   ALLS F K G    A K+   M+   + PD+ + + 
Sbjct: 919 -----------------------RALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIE 955

Query: 433 LLRGLC 438
           L+   C
Sbjct: 956 LINESC 961


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 104/426 (24%), Positives = 189/426 (44%), Gaps = 45/426 (10%)

Query: 164 LFKIGRVDLGIKVLKET----QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN 219
           L + G ++ G K L++      +P+ ++    +  LCK         V+ ++   G  P+
Sbjct: 120 LVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPD 179

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
           V  + +L++ +CK G I  A QLL  M     S  V  +  ++       +L  A  + +
Sbjct: 180 VITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAMEVLD 236

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
           + +Q  C P+V+TYT LI+   +      A   LD +  +G  PD+V +NVLI+ + K G
Sbjct: 237 RQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEG 296

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYN 396
             D+A+   + +      P+  T   +L ++C +GR+    K +  +        +V +N
Sbjct: 297 RLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFN 356

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN-------- 448
            L+++ C+ G   +A+ +   M   G TP++ S+  LL  LC  +K++ AI         
Sbjct: 357 ILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSR 416

Query: 449 -VYQGIVMNNPAVNAH--------------------------VHTAIVDRLIEAGRCHKA 481
             Y  IV  N  + A                            +  ++D L + G+   A
Sbjct: 417 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDA 476

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
           I+L      +    D+++Y+  + GL   G+ +EA   +  ++ + V PNA TY  ++L 
Sbjct: 477 IKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLG 536

Query: 542 FCKERN 547
            CK R 
Sbjct: 537 LCKARQ 542



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 92/363 (25%), Positives = 175/363 (48%), Gaps = 8/363 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV +++ ++  +   +G+ +    ++    +  C     T+ + +    +    G  ++ 
Sbjct: 211 DVVTYNTILRTLCD-SGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKL 269

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
            DEM   G  P+    N++++ + K GR+D  I+ L         PN ++ NI L ++C 
Sbjct: 270 LDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCS 329

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
                + +  +  M+RKG  P+V  F IL+N  C+ G I  A  +L  M   G + +  +
Sbjct: 330 TGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLS 389

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  L+    + ++++ A    + MV  GC P++VTY +L+    +     +A   L+ L 
Sbjct: 390 YNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLG 449

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
           S+G +P L+ +N +ID LSK+G  DDA+ + D +    L PD  T+ +L+  +   G+  
Sbjct: 450 SKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVD 509

Query: 378 LLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
                   LE   V+ + + YN+++   CKA    +A+     M+ +G  P   S++ L+
Sbjct: 510 EAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILI 569

Query: 435 RGL 437
            GL
Sbjct: 570 EGL 572



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 135/297 (45%), Gaps = 12/297 (4%)

Query: 262 IDGFRRLRRLDMAGYL------WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
           ++    LRRL   G L       E MV  G  P+++  TSLI+G  +      A   +++
Sbjct: 111 VENNNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEI 170

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
           LE  G  PD++ +NVLI    K G    AL + D    + + PD  T+ ++L T+C SG+
Sbjct: 171 LEDSGAVPDVITYNVLISGYCKTGEIGSALQLLD---RMSVSPDVVTYNTILRTLCDSGK 227

Query: 376 FSLLPKLV---CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
                +++      E   D++ Y  L+   CK     QA+KL + M DKG  PD  ++  
Sbjct: 228 LKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNV 287

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           L+ G+C   ++DEAI     +       N   H  I+  +   GR   A +     I + 
Sbjct: 288 LINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKG 347

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
               VV++ + I  L   G    A  +  +M      PN+ +Y  +L + CK++ ++
Sbjct: 348 CSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKME 404



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/376 (22%), Positives = 160/376 (42%), Gaps = 12/376 (3%)

Query: 232 KMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVV 291
           + G + E ++ L  M+  G    + A T LI G  +  +   A  + E +  +G  P+V+
Sbjct: 122 RNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVI 181

Query: 292 TYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGL 351
           TY  LI G+ +      A   LD +     +PD+V +N ++  L   G   +A++V D  
Sbjct: 182 TYNVLISGYCKTGEIGSALQLLDRMSV---SPDVVTYNTILRTLCDSGKLKEAMEVLDRQ 238

Query: 352 LELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFP 408
           ++ +  PD  T+  L+   C         KL+  +     + D+V YN L++  CK G  
Sbjct: 239 MQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 298

Query: 409 NQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAI 468
           ++A++  N M   G  P+  +   +LR +C   +  +A      ++    + +      +
Sbjct: 299 DEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNIL 358

Query: 469 VDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAV 528
           ++ L   G   +AI +  +        + +SY   +  L +  + E A      M     
Sbjct: 359 INFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGC 418

Query: 529 PPNAYTYRVMLLSFCKERNIKMVKRLLQDVID---ARIELDYHTSIRLTKFIFKFHSSSS 585
            P+  TY  +L + CK+  + +   +L  +     + + + Y+T I     + K   +  
Sbjct: 419 YPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVI---DGLSKVGKTDD 475

Query: 586 AVNQLVEMCNLGLIPD 601
           A+  L EM   GL PD
Sbjct: 476 AIKLLDEMKGKGLKPD 491



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 126/268 (47%), Gaps = 4/268 (1%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           TGR+      + E+ R GC     TF + +    R  + G  ++  ++M + G TPN+ +
Sbjct: 330 TGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLS 389

Query: 157 RNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N ++  L K  +++  I+ L         P+ +++N  L  LCK   V    +++  + 
Sbjct: 390 YNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLG 449

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
            KG  P +  +  +++   K+G+  +A +LL  M   G    +  ++ L+ G  R  ++D
Sbjct: 450 SKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVD 509

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A   +  + + G  PN +TY S++ G  +A+    A  FL  + + G  P    + +LI
Sbjct: 510 EAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILI 569

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDS 360
           + L+  G   +AL++ + L    +V  S
Sbjct: 570 EGLAYEGLAKEALELLNELCSRGVVKKS 597



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 87/209 (41%), Gaps = 3/209 (1%)

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           V  N  L    + G   +  K    M+ +G  PD  +   L+RGLC   K  +A  V + 
Sbjct: 111 VENNNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEI 170

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           +  +    +   +  ++    + G    A+QL  R  V     DVV+Y   +R L + G+
Sbjct: 171 LEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRMSVSP---DVVTYNTILRTLCDSGK 227

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
            +EA  +  +       P+  TY +++ + CKE  +    +LL ++ D   + D  T   
Sbjct: 228 LKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNV 287

Query: 573 LTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           L   I K      A+  L  M + G  P+
Sbjct: 288 LINGICKEGRLDEAIRFLNHMPSYGCQPN 316



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/191 (20%), Positives = 80/191 (41%), Gaps = 5/191 (2%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
            R  + D+ +++ +++ + +  G+ +    I+ +L   GC     T+   +    +    
Sbjct: 415 SRGCYPDIVTYNTLLTALCK-DGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKT 473

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIA 191
              ++  DEM   G  P+    + ++  L + G+VD  I    + +     PN +++N  
Sbjct: 474 DDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSI 533

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           +  LCK        D +  MV +G  P    + IL+      G   EA +LL  + + G 
Sbjct: 534 MLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGV 593

Query: 252 SLSVNAWTVLI 262
               +A  V++
Sbjct: 594 VKKSSAEQVVV 604


>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
          Length = 798

 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 106/462 (22%), Positives = 198/462 (42%), Gaps = 7/462 (1%)

Query: 147 RFGFTPNTFARNIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCKLNDVS 202
           R G  P+  +   V++ L + G++D    L  ++L +   PN +++N  L   C      
Sbjct: 199 RGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPK 258

Query: 203 NVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLI 262
               +   M R G  P+V  +  L+   CK GR  EA ++   M+  G     + +  L+
Sbjct: 259 EAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLL 318

Query: 263 DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
            G+     L     L + MV+NG  P+   +  LI  + +  M   A      +  +G  
Sbjct: 319 HGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLH 378

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL 382
           P++V +  ++D L ++G  DDA+  +D L+   L P+   F +L+  +C   ++    +L
Sbjct: 379 PNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEEL 438

Query: 383 VC---GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
                G  +  + + +N LL++ CK G   +A  +++ M+      D  ++  L+ G C 
Sbjct: 439 AVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCL 498

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
             K+DEA  + +G+V++    N   +  I++   + GR   A  LFR+   +     +V 
Sbjct: 499 DGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVI 558

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           Y+  + GL +  R   A  LY  M    +     TY ++L   C+        R+  ++ 
Sbjct: 559 YSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLC 618

Query: 560 DARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
                L   T   +   + K      A +    +   GL+P+
Sbjct: 619 LIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPN 660



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 110/446 (24%), Positives = 196/446 (43%), Gaps = 42/446 (9%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCK 197
           FDEM   G +PN    N ++      G+    I    K+ ++   P+ +++N  +  LCK
Sbjct: 229 FDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCK 288

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
                  + V   MV+KG  P+  ++  LL+ +   G + + +QLL +M+  GT      
Sbjct: 289 NGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYI 348

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           + +LI  + +   +D A   + KM Q G  PN+VTY +++           A S  D L 
Sbjct: 349 FNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLI 408

Query: 318 SEG------------HA-----------------------PDLVFHNVLIDCLSKMGSYD 342
           SEG            H                        P+ +F N L++ L K G   
Sbjct: 409 SEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVT 468

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALL 399
            A +++D ++ + +  D  T+ +L+   CL G+     KL+ G+    V+ + V YN ++
Sbjct: 469 RAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTII 528

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
           + +CK G    A  L+  M  KG  P    +  +L GL   R+I  A  +Y  ++     
Sbjct: 529 NGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIK 588

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
           +    +  I+  L +      A+++F    +  + L   ++ + I  LL+GGR +EA  L
Sbjct: 589 LPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDL 648

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKE 545
           ++ +    + PN  TY +M+ S  ++
Sbjct: 649 FASLLARGLVPNVVTYWLMMKSLIEQ 674



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 112/464 (24%), Positives = 193/464 (41%), Gaps = 51/464 (10%)

Query: 133 EMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSF 188
           E   + L  F+ M R     +    +IV+    + G +DL      +V++       ++F
Sbjct: 79  ESPAVALSLFNRMPR----ADLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITF 134

Query: 189 NIALCNLCKLNDVSNVKDV-IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           +  L  LC     S+  D+ +  M   G  PN   + ILL   C   R  +A  LL  M+
Sbjct: 135 SPLLKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMM 194

Query: 248 T----LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
                 G    V ++T +I+G  R  +LD A  L+++M+  G SPN +TY  L+ G+  +
Sbjct: 195 ADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSS 254

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
                A      +  +G  PD+V +N L+  L K G   +A  V+D +++    PDS  +
Sbjct: 255 GKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIY 314

Query: 364 CSLLSTVCLSGRFSLLPKLV------------------------CGLEVEA--------- 390
            +LL      G    + +L+                         G+  EA         
Sbjct: 315 GTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQ 374

Query: 391 -----DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
                ++V Y  ++   C+ G  + A+  ++ ++ +G TP+   F  L+ GLC   K D+
Sbjct: 375 QGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDK 434

Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
           A  +   ++      N      +++ L + G   +A  +F   +      DV++YT  I 
Sbjct: 435 AEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLID 494

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
           G    G+ +EA  L   M    V PN  TY  ++  +CK   I+
Sbjct: 495 GYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIE 538



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/380 (23%), Positives = 171/380 (45%), Gaps = 9/380 (2%)

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
           + R G       F + +  Y +  M    + AF +M + G  PN      VMD L ++G+
Sbjct: 337 MVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGK 396

Query: 170 VDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEI 225
           VD  +    +++ E   PN + F   +  LC  +     +++   M+ +G  PN   F  
Sbjct: 397 VDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNT 456

Query: 226 LLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
           LLN  CK G +  A  +  LM+ +     V  +T LIDG+    ++D A  L E MV +G
Sbjct: 457 LLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDG 516

Query: 286 CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL 345
             PN VTY ++I G+ +      A S    + S+G  P +V ++ ++  L +      A 
Sbjct: 517 VKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAK 576

Query: 346 DVYDGLLE--LKLVPDSYTFC--SLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSY 401
           ++Y  +++  +KL   +Y      L    C      +   L C ++       +N ++  
Sbjct: 577 ELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNL-CLIDFHLQNRTFNIMIDA 635

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVN 461
             K G  ++A  L+ ++L +G  P+  ++  +++ L     ++E  +++  +  N    +
Sbjct: 636 LLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTAD 695

Query: 462 AHVHTAIVDRLIEAGRCHKA 481
           + +  A+V +L + G   KA
Sbjct: 696 SRMLNALVGKLPQKGEVRKA 715



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 98/222 (44%), Gaps = 11/222 (4%)

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
            ADL  Y+ ++    +AG  + A      ++  G+T    +F  LL+GLC  ++  +A++
Sbjct: 93  RADLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMD 152

Query: 449 VYQGIVMNNPAV----NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY----PLDVVSY 500
           +    +   PA+    NA  +  ++  L +  R  +A+ L    + +      P DVVSY
Sbjct: 153 I---ALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSY 209

Query: 501 TVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
           T  I GLL  G+ ++AY L+ +M    + PN  TY  +L  +C     K    + + +  
Sbjct: 210 TTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCR 269

Query: 561 ARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
             +E D  T   L  ++ K   S  A      M   G  PD 
Sbjct: 270 DGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDS 311


>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 794

 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 109/451 (24%), Positives = 195/451 (43%), Gaps = 42/451 (9%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNL 195
           + +DEM       + +   I++  L K G+V+ G K++++      +PN + +N  +   
Sbjct: 158 KVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGY 217

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIA------------------ 237
           CK  D      +   +  KGF P V+ +  ++N FCK G+                    
Sbjct: 218 CKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSI 277

Query: 238 -----------------EAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
                            EA   +G MI  G    +  + +LI G      +  A  L E+
Sbjct: 278 HIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQ 337

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
            ++ G  PN V+YT LI  + +   +  A   L  +   GH PDLV +  LI  L   G 
Sbjct: 338 AIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGE 397

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNA 397
            D AL V + ++E  ++PD+  +  L+S +C  GR      L+  +    V  D  +   
Sbjct: 398 VDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITAT 457

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
           L+  F + G   +A KL+   ++KG  P    +  +++G C    + +A+  ++ ++   
Sbjct: 458 LVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGL 517

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAY 517
            + +   ++ I+D  I+    H A+++F   +      +VV+YT+ I G    G    A 
Sbjct: 518 HSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAE 577

Query: 518 ILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
             + QM  + + PN  TY +++  FCK  N+
Sbjct: 578 KTFKQMLSLRLKPNVVTYTILIGCFCKGVNL 608



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 113/501 (22%), Positives = 216/501 (43%), Gaps = 11/501 (2%)

Query: 65  IALSFFIWCAKQRDYFHDVQSFD-HMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFL 123
           + L FF W +KQ +  + +  F    +  +      F  V  ++  +     +   + F 
Sbjct: 46  MGLEFFHWASKQSNCGNYLNEFSCSSLLRLLARRRLFSEVESLLKIMKSKDLMPTREAFS 105

Query: 124 LFLRIYWRGEMYGMVLEAFDEMGRFGF-TPNTFARNIVMDVLFKIGRVDLGIKVLKETQL 182
           L + ++    +    LE +    +     P+ F+ N +++VL K G+V++  KV  E   
Sbjct: 106 LVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSLLNVLVKHGKVEIACKVYDEMVD 165

Query: 183 PNFLSFNIALC----NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAE 238
            N    N  +C     LCK   V +   +I     +G  PN+  +  L++ +CK G    
Sbjct: 166 RNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYCKKGDTER 225

Query: 239 AYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIK 298
           A  L   +   G   +V  +  +I+GF +  + ++   L  +M + G   ++  Y ++I 
Sbjct: 226 ANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIID 285

Query: 299 G-FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
             F        A +   M++S G  PD+  +N+LI      G    A  + +  ++  L+
Sbjct: 286 AQFKHGCRIEAADTVGWMIKS-GCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLL 344

Query: 358 PDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV---EADLVVYNALLSYFCKAGFPNQAVKL 414
           P+  ++  L+   C  G +     L+  +     + DLV Y AL+     AG  + A+ +
Sbjct: 345 PNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTV 404

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
            N M++KG  PD   +  L+ GLC   ++  A  +   ++  N A +A +   +VD  I 
Sbjct: 405 RNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIR 464

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
            G   +A +LF   I +     VV Y   I+G  + G  ++A + + +M      P+ +T
Sbjct: 465 HGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFT 524

Query: 535 YRVMLLSFCKERNIKMVKRLL 555
           Y  ++  + K  ++    R+ 
Sbjct: 525 YSTIIDGYIKMNDLHGALRMF 545



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 109/500 (21%), Positives = 206/500 (41%), Gaps = 65/500 (13%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           K + +   V+++  +I+   +  G+FE V  ++ E++  G  +    +   +   ++   
Sbjct: 234 KMKGFLPTVKTYGAIINGFCK-KGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFK--- 289

Query: 135 YGMVLEAFDEMG---RFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET----QLPNFLS 187
           +G  +EA D +G   + G  P+    NI++      G V    ++L++      LPN +S
Sbjct: 290 HGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVS 349

Query: 188 FNIALCNLCKLNDVSNVKDVI-----------------------------------GMMV 212
           +   + N CK  +     D++                                     MV
Sbjct: 350 YTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMV 409

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
            KG  P+  ++ +L++  CK GR+  A  LL  M+    +        L+DGF R    +
Sbjct: 410 EKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFE 469

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A  L+E  ++ G  P VV Y ++IKG+ +  M   A      +    H+PD   ++ +I
Sbjct: 470 EAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTII 529

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG---RFSLLPKLVCGLEVE 389
           D   KM     AL ++  +++    P+  T+  L++  CLSG   R     K +  L ++
Sbjct: 530 DGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLK 589

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            ++V Y  L+  FCK     +A   +  ML +   P++ ++  L+ GL     +D  I+ 
Sbjct: 590 PNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGL--TNNVDFVISN 647

Query: 450 YQGIVMNNPAV--------------NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
            +     N  V               A  + +I+  L +      A+ L  + + + +  
Sbjct: 648 QRSEQTENSLVLESFGMMISDGWDRRAASYNSILICLCQHKMVKHALHLRDKMMSKGFLP 707

Query: 496 DVVSYTVAIRGLLEGGRTEE 515
           D VS    + GL   GR+++
Sbjct: 708 DPVSLVALLHGLCLEGRSQD 727



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 89/452 (19%), Positives = 194/452 (42%), Gaps = 29/452 (6%)

Query: 202 SNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL-SVNAWTV 260
           S V+ ++ +M  K   P    F ++++ F   G +  A +     I +   +  V +   
Sbjct: 83  SEVESLLKIMKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNS 142

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           L++   +  ++++A  ++++MV      +  T   ++KG  +       +  ++     G
Sbjct: 143 LLNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRG 202

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
             P++VF+N LID   K G  + A  ++  L     +P   T+ ++++  C  G+F ++ 
Sbjct: 203 CMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVD 262

Query: 381 KLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
           KL+  +    ++  + +YN ++    K G   +A      M+  G  PD  ++  L+ G 
Sbjct: 263 KLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGS 322

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
           C   ++ +A  + +  +      N   +T ++    + G   +A+ L  +     +  D+
Sbjct: 323 CSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDL 382

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
           V+Y   I GL+  G  + A  + ++M    V P+A  Y V++   CK+  +   K LL +
Sbjct: 383 VTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAE 442

Query: 558 VIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEM--------------------CNLG 597
           ++D  +  D   +  L     + H       +L E+                    C  G
Sbjct: 443 MLDQNVAPDAFITATLVDGFIR-HGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFG 501

Query: 598 LIPDEM--WRKL--GLLSDETMTPVSLFDGFV 625
           ++ D +  ++++  GL S +  T  ++ DG++
Sbjct: 502 MMKDALLCFKRMIQGLHSPDEFTYSTIIDGYI 533


>gi|255569207|ref|XP_002525572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223535151|gb|EEF36831.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 687

 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 100/340 (29%), Positives = 165/340 (48%), Gaps = 8/340 (2%)

Query: 166 KIGRVDLGIKVLKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFE 224
           K GR D  I +L    + PN   ++  +  LCK  ++         M   G YP+   + 
Sbjct: 336 KKGRSDKAINLLNFFNVRPNIFVYSSFMTKLCKDGNMLEASKTFQEMSEFGLYPDCFCYT 395

Query: 225 ILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN 284
           I++  +CK+G I +A+Q LG M+  G + SV  +T+LI+   +   + MA YL ++M+  
Sbjct: 396 IIIGGYCKVGDINKAFQYLGEMLKFGITPSVTTYTLLINACCKSGDMAMAEYLLQRMMLE 455

Query: 285 GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
           G  P+VVT+  LI GF +      AF  LD++ S G +PD V +N LI  L   G  ++A
Sbjct: 456 GLIPDVVTFNCLIDGFGKKGYLQKAFELLDIMRSAGMSPDTVTYNALIHSLIARGYPNEA 515

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSY 401
            D+   L+   L PD  TF  ++      G F    L+   +    V+ D+V  +ALL+ 
Sbjct: 516 KDILHELIRRGLSPDVMTFTDVIDGFSKKGNFEEAFLVWSYMSERHVKPDVVTCSALLNG 575

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVN 461
           +C+A   ++A  L+  MLD G  PD   +  L+ G C A  ++ A N+   ++ +    N
Sbjct: 576 YCRARRMDEANALFLKMLDAGLKPDLVLYNNLIHGFCSAGNMNAACNLVAMMIDDGFLPN 635

Query: 462 AHVHTAIV----DRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
              H A       + ++    H +++L +  +     LDV
Sbjct: 636 ITTHRAFALGFEKKWVKNPELHASLKLKQILLTHSTCLDV 675



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 94/454 (20%), Positives = 187/454 (41%), Gaps = 43/454 (9%)

Query: 148 FGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCN-----LCKLNDVS 202
           FG        ++++D      +V L + ++ E +L N    ++ +CN     L + + + 
Sbjct: 178 FGTKDLETVYSMLVDCYVTESKVSLALNLIHEIKLLNIFP-SMGVCNSLLKALLRSHQLD 236

Query: 203 NVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLI 262
              D++  M   G + N  +  + +  +C  G I   +++L  M   G    V A+T++I
Sbjct: 237 LAWDILEGMQSFGMHLNASILSLFIESYCAEGNIQSGWKILMEMKNYGIKADVIAYTIVI 296

Query: 263 DGFRRLRRLDMAGYLWEKMVQNG--------------------------------CSPNV 290
           D   ++  + +A  L  KM+  G                                  PN+
Sbjct: 297 DALCKISCVKVATSLLFKMIHCGISVDSVSVSSVIDGYCKKGRSDKAINLLNFFNVRPNI 356

Query: 291 VTYTS-LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
             Y+S + K   +  M   + +F +M E  G  PD   + ++I    K+G  + A     
Sbjct: 357 FVYSSFMTKLCKDGNMLEASKTFQEMSEF-GLYPDCFCYTIIIGGYCKVGDINKAFQYLG 415

Query: 350 GLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAG 406
            +L+  + P   T+  L++  C SG  ++   L+  + +E    D+V +N L+  F K G
Sbjct: 416 EMLKFGITPSVTTYTLLINACCKSGDMAMAEYLLQRMMLEGLIPDVVTFNCLIDGFGKKG 475

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
           +  +A +L + M   G +PD  ++  L+  L      +EA ++   ++    + +    T
Sbjct: 476 YLQKAFELLDIMRSAGMSPDTVTYNALIHSLIARGYPNEAKDILHELIRRGLSPDVMTFT 535

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
            ++D   + G   +A  ++          DVV+ +  + G     R +EA  L+ +M   
Sbjct: 536 DVIDGFSKKGNFEEAFLVWSYMSERHVKPDVVTCSALLNGYCRARRMDEANALFLKMLDA 595

Query: 527 AVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
            + P+   Y  ++  FC   N+     L+  +ID
Sbjct: 596 GLKPDLVLYNNLIHGFCSAGNMNAACNLVAMMID 629



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 95/407 (23%), Positives = 166/407 (40%), Gaps = 41/407 (10%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLG----IKVLKETQLPNFLSFNIALCNLCKLN 199
           EM  +G   +  A  IV+D L KI  V +      K++      + +S +  +   CK  
Sbjct: 279 EMKNYGIKADVIAYTIVIDALCKISCVKVATSLLFKMIHCGISVDSVSVSSVIDGYCKKG 338

Query: 200 DVSNVKDVIGMM-VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
                 +++    VR    PN+ ++   +   CK G + EA +    M   G       +
Sbjct: 339 RSDKAINLLNFFNVR----PNIFVYSSFMTKLCKDGNMLEASKTFQEMSEFGLYPDCFCY 394

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
           T++I G+ ++  ++ A     +M++ G +P+V TYT LI    ++   ++A   L  +  
Sbjct: 395 TIIIGGYCKVGDINKAFQYLGEMLKFGITPSVTTYTLLINACCKSGDMAMAEYLLQRMML 454

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL 378
           EG  PD+V  N LID   K G    A ++ D +    + PD+                  
Sbjct: 455 EGLIPDVVTFNCLIDGFGKKGYLQKAFELLDIMRSAGMSPDT------------------ 496

Query: 379 LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
                         V YNAL+      G+PN+A  + + ++ +G +PD  +F  ++ G  
Sbjct: 497 --------------VTYNALIHSLIARGYPNEAKDILHELIRRGLSPDVMTFTDVIDGFS 542

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
                +EA  V+  +   +   +    +A+++    A R  +A  LF + +      D+V
Sbjct: 543 KKGNFEEAFLVWSYMSERHVKPDVVTCSALLNGYCRARRMDEANALFLKMLDAGLKPDLV 602

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
            Y   I G    G    A  L + M      PN  T+R   L F K+
Sbjct: 603 LYNNLIHGFCSAGNMNAACNLVAMMIDDGFLPNITTHRAFALGFEKK 649



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 71/348 (20%), Positives = 150/348 (43%)

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
           ++ +L++C+    +++ A  L+  +  L    S+     L+    R  +LD+A  + E M
Sbjct: 186 VYSMLVDCYVTESKVSLALNLIHEIKLLNIFPSMGVCNSLLKALLRSHQLDLAWDILEGM 245

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
              G   N    +  I+ +         +  L  +++ G   D++ + ++ID L K+   
Sbjct: 246 QSFGMHLNASILSLFIESYCAEGNIQSGWKILMEMKNYGIKADVIAYTIVIDALCKISCV 305

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSY 401
             A  +   ++   +  DS +  S++   C  GR      L+    V  ++ VY++ ++ 
Sbjct: 306 KVATSLLFKMIHCGISVDSVSVSSVIDGYCKKGRSDKAINLLNFFNVRPNIFVYSSFMTK 365

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVN 461
            CK G   +A K +  M + G  PD + +  ++ G C    I++A      ++      +
Sbjct: 366 LCKDGNMLEASKTFQEMSEFGLYPDCFCYTIIIGGYCKVGDINKAFQYLGEMLKFGITPS 425

Query: 462 AHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYS 521
              +T +++   ++G    A  L +R ++E    DVV++   I G  + G  ++A+ L  
Sbjct: 426 VTTYTLLINACCKSGDMAMAEYLLQRMMLEGLIPDVVTFNCLIDGFGKKGYLQKAFELLD 485

Query: 522 QMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
            M+   + P+  TY  ++ S          K +L ++I   +  D  T
Sbjct: 486 IMRSAGMSPDTVTYNALIHSLIARGYPNEAKDILHELIRRGLSPDVMT 533


>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
 gi|194702156|gb|ACF85162.1| unknown [Zea mays]
 gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
          Length = 567

 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 92/360 (25%), Positives = 171/360 (47%), Gaps = 7/360 (1%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR      ++ ++ R GC+    T+ + L    +   Y   ++  DEM   G  P+    
Sbjct: 180 GRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTY 239

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N+V++ + + GRV+  ++ LK        PN +S+NI L  L       + + ++  M  
Sbjct: 240 NVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAH 299

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           KG  PNV  F +L++  C+ G +  A ++L  M   G + +  ++  L+  F + +++  
Sbjct: 300 KGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHK 359

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A    E MV  GC P++V+Y +L+          +A   L  L+ +G +P L+ +N +ID
Sbjct: 360 AMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVID 419

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEA 390
            L+K G   +AL++ D +    L PD  T+ ++ S +C   R     +  C ++   +  
Sbjct: 420 GLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRP 479

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
              +YNA+L   CK    + A+ L+  M+  G  P+  ++  L+ GL     + EA  ++
Sbjct: 480 TAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELF 539



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 94/379 (24%), Positives = 177/379 (46%), Gaps = 7/379 (1%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKET----QLPNFLSFNIALCNLCKLNDVSNVKDV 207
           P+ +  N ++  L   GR    + VL++      LP+ +++ I L   CK +       +
Sbjct: 164 PDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKL 223

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
           +  M  KG  P++  + ++LN  C+ GR+ +A + L  + + G   +  ++ +++ G   
Sbjct: 224 LDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFT 283

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
             R + A  L E+M   GC PNVVT+  LI       +   A   L+ +   G  P+ + 
Sbjct: 284 AERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLS 343

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE 387
           +N L+    K      A++  + ++     PD  ++ +LL+ +C +G   +  +L+  L+
Sbjct: 344 YNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLK 403

Query: 388 ---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
                  L+ YN ++    KAG   +A++L + M  KG  PD  ++  +  GLC   +I+
Sbjct: 404 DKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIE 463

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
           EA+  +  +        A ++ AI+  L +    H AI LF   I      +  +YT+ +
Sbjct: 464 EAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILV 523

Query: 505 RGLLEGGRTEEAYILYSQM 523
            GL   G  +EA  L++Q+
Sbjct: 524 EGLAYEGLVKEARELFAQL 542



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 102/456 (22%), Positives = 199/456 (43%), Gaps = 33/456 (7%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGM 210
           P+    N ++      G++D   +++ +  + P+  ++N  +  LC     SN   V+  
Sbjct: 132 PDVMVYNAMVAGYCGAGQLDAARRLVADMPVEPDAYTYNTLIRGLCGRGRTSNALAVLED 191

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M R+G  P+V  + ILL   CK     +A +LL  M   G +  +  + V+++G  +  R
Sbjct: 192 MFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGR 251

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           ++ A    + +   GC PN V+Y  ++KG   A+ +  A   ++ +  +G  P++V  N+
Sbjct: 252 VEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNM 311

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA 390
           LI  L + G  + A++V + + +    P+S +                            
Sbjct: 312 LISFLCRRGLVEPAMEVLEQMPQYGCTPNSLS---------------------------- 343

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
               YN LL  FCK    ++A++    M+ +G  PD  S+  LL  LC   ++D AI + 
Sbjct: 344 ----YNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELL 399

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
             +     +     +  ++D L +AG+  +A++L      +    D+++Y+    GL   
Sbjct: 400 HQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCRE 459

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
            R EEA   + +++ + + P A  Y  +LL  CK R       L   +I +    +  T 
Sbjct: 460 DRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTY 519

Query: 571 IRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRK 606
             L + +        A     ++C+ G++  ++ +K
Sbjct: 520 TILVEGLAYEGLVKEARELFAQLCSRGVVNKKLMKK 555



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 54/243 (22%), Positives = 108/243 (44%), Gaps = 5/243 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           +V +F+ +IS + R  G  E    ++ ++ + GC   + ++   L  + + +     +E 
Sbjct: 305 NVVTFNMLISFLCR-RGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEF 363

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
            + M   G  P+  + N ++  L + G VD+ I++L + +     P  +S+N  +  L K
Sbjct: 364 VELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTK 423

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
                   +++  M  KG  P++  +  + +  C+  RI EA +    +  +G   +   
Sbjct: 424 AGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAAL 483

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  ++ G  + R    A  L+  M+ +GC PN  TYT L++G     +   A      L 
Sbjct: 484 YNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLC 543

Query: 318 SEG 320
           S G
Sbjct: 544 SRG 546



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 63/271 (23%), Positives = 123/271 (45%), Gaps = 7/271 (2%)

Query: 335 LSKMGSYDDALDVYDGLLELKL-VPDSYTFCS-LLSTVCLSGRFSLLPKLVCGLEVEADL 392
           L + G  DDAL + D L  L    P +   C+ L+  +C SGR +   +++       D+
Sbjct: 77  LVRRGELDDALRLVDSLAGLNPPSPAAVGPCAALIKKLCASGRTADARRVLAA--SGPDV 134

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           +VYNA+++ +C AG  + A +L   + D    PD Y++  L+RGLCG  +   A+ V + 
Sbjct: 135 MVYNAMVAGYCGAGQLDAARRL---VADMPVEPDAYTYNTLIRGLCGRGRTSNALAVLED 191

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           +       +   +T +++   +     +A++L      +    D+V+Y V + G+ + GR
Sbjct: 192 MFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGR 251

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
            E+A      +      PN  +Y ++L         +  ++L++++       +  T   
Sbjct: 252 VEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNM 311

Query: 573 LTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           L  F+ +      A+  L +M   G  P+ +
Sbjct: 312 LISFLCRRGLVEPAMEVLEQMPQYGCTPNSL 342


>gi|255559961|ref|XP_002520999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539836|gb|EEF41416.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 628

 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 123/481 (25%), Positives = 206/481 (42%), Gaps = 72/481 (14%)

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
           L NF+S NI L  LC +  V     V GM++RKG+ PN R F  L+   C  G+I EA +
Sbjct: 139 LKNFISLNILLNCLCSVKRVFEGFVVFGMILRKGYRPNTRTFTNLVKGLCLEGKIGEAVR 198

Query: 242 LLGLM---------ITLGTSLS--------------------------------VNAWTV 260
           +  +M         IT G  +S                                V +++ 
Sbjct: 199 VFKIMGVFDCRPSAITCGVLISGLCRTGNTCNALKLHEAMINGNSDFGINCKPTVVSYSC 258

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           +ID   +   ++ A   + +M + G  PNVVTYTSL+ G   A  +  A      +   G
Sbjct: 259 IIDSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDHG 318

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
             PD+V  +VLI  L K+G   +A  ++D +++  + P + T+  L+   CL+G      
Sbjct: 319 LLPDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEGYCLAGMVDEGK 378

Query: 381 KLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD--NYSFVG--- 432
           K+   +     + D   Y+ L+  +CK    + A+ LY  M+D+G  P    YS VG   
Sbjct: 379 KIFLSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYREMMDRGIQPTVITYSKVGDAR 438

Query: 433 -----------------------LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
                                   L GLC    + EA++V+ G+     A N  +  +++
Sbjct: 439 KLFGEIQFQDMVLDSISYSIYNVYLDGLCKNGCVSEALDVFYGLENCKFASNVAIFNSLI 498

Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
           + +  + +   A +LF R   E    DVV+YT+ I GL + G+ ++AY L+ +M+     
Sbjct: 499 NGMCRSEKLEIAWELFNRLCNEALQPDVVTYTIMIYGLCKVGQPQKAYDLFLEMEEKGCA 558

Query: 530 PNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQ 589
           PN  T+  ++   C       +  LL  +   ++  D  T + +   + K  +    +N 
Sbjct: 559 PNVVTFNTLMRGLCLNSERPKIVELLHKMAARKLSPDASTLLIVMDILLKDENYHECLNL 618

Query: 590 L 590
           L
Sbjct: 619 L 619



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/362 (20%), Positives = 141/362 (38%), Gaps = 44/362 (12%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P    FN     L K     +V  + G M   G   N     ILLNC C + R+ E + +
Sbjct: 105 PALSRFNNLFGALAKKKQYLHVISMCGRMNSIGLLKNFISLNILLNCLCSVKRVFEGFVV 164

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
            G+              +L  G+R                     PN  T+T+L+KG   
Sbjct: 165 FGM--------------ILRKGYR---------------------PNTRTFTNLVKGLCL 189

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE------LKL 356
                 A     ++      P  +   VLI  L + G+  +AL +++ ++       +  
Sbjct: 190 EGKIGEAVRVFKIMGVFDCRPSAITCGVLISGLCRTGNTCNALKLHEAMINGNSDFGINC 249

Query: 357 VPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVK 413
            P   ++  ++ ++C  G      +    ++ +    ++V Y +LL   C A    +A +
Sbjct: 250 KPTVVSYSCIIDSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKR 309

Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
           L+  M+D G  PD  +F  L+  LC   K+ EA  ++  +V      +   +  +++   
Sbjct: 310 LFIEMVDHGLLPDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEGYC 369

Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
            AG   +  ++F   + ++   D  SY++ ++   +      A ILY +M    + P   
Sbjct: 370 LAGMVDEGKKIFLSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYREMMDRGIQPTVI 429

Query: 534 TY 535
           TY
Sbjct: 430 TY 431



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 74/348 (21%), Positives = 150/348 (43%), Gaps = 10/348 (2%)

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           L  A + + +M+    +P +  + +L     + K +    S    + S G   + +  N+
Sbjct: 88  LHEALHFFNQMIHMQTTPALSRFNNLFGALAKKKQYLHVISMCGRMNSIGLLKNFISLNI 147

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLE 387
           L++CL  +    +   V+  +L     P++ TF +L+  +CL G+      + K++   +
Sbjct: 148 LLNCLCSVKRVFEGFVVFGMILRKGYRPNTRTFTNLVKGLCLEGKIGEAVRVFKIMGVFD 207

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTML----DKGFT--PDNYSFVGLLRGLCGAR 441
                +    L+S  C+ G    A+KL+  M+    D G    P   S+  ++  LC   
Sbjct: 208 CRPSAITCGVLISGLCRTGNTCNALKLHEAMINGNSDFGINCKPTVVSYSCIIDSLCKDG 267

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYT 501
            ++ A   +  +       N   +T+++  L  A    +A +LF   +      DVV+++
Sbjct: 268 LVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDHGLLPDVVTFS 327

Query: 502 VAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
           V I  L + G+ +EA  L+  M    V P+  TY +++  +C    +   K++   +++ 
Sbjct: 328 VLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEGYCLAGMVDEGKKIFLSMVNK 387

Query: 562 RIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM-WRKLG 608
           R + D  +   L K   K      A+    EM + G+ P  + + K+G
Sbjct: 388 RCQHDAGSYSILMKAYCKDSEVHGAMILYREMMDRGIQPTVITYSKVG 435


>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 882

 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 105/481 (21%), Positives = 213/481 (44%), Gaps = 16/481 (3%)

Query: 79  YFHDVQ---------SFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIY 129
           +FH+++         S+  MI V+ +  GR      +  ++     V  A  +   +  Y
Sbjct: 271 FFHELKAQGLKPDDVSYTSMIWVLCK-AGRLGEAEELFAQMEAERSVPCAYAYNTMIMGY 329

Query: 130 WRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI---KVLKETQLPNFL 186
                +    +  + +   G  P+  + N ++  L K  +VD  +   +V+K+   PN  
Sbjct: 330 GSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSS 389

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           ++NI +  LC    V     ++  M     +PN+    I+++  CK  ++ EAY++    
Sbjct: 390 TYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESA 449

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
              G +     +  LIDG  +  ++D A  L+EKM+  G + N V YTSLI+ F      
Sbjct: 450 SQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRK 509

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
                    L   G  PDL   N  +DC+ K G  +    +++ +     +PD  ++  L
Sbjct: 510 EDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSIL 569

Query: 367 LSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           +  +  +G+      +   ++ +    D   YNA++  FCK+G  ++A ++   M +K  
Sbjct: 570 IHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCV 629

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
            P   ++  ++ GL    ++DEA  +++        +N  ++++++D   + GR  +A  
Sbjct: 630 QPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYL 689

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           +    + +    +V ++   +  L++     EA + +  MK +  PPN YTY +++   C
Sbjct: 690 ILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLC 749

Query: 544 K 544
           +
Sbjct: 750 R 750



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 89/338 (26%), Positives = 164/338 (48%), Gaps = 7/338 (2%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           F E+ R G  P+    N  MD +FK G V+ G  + ++ +    LP+  S++I +  L K
Sbjct: 516 FKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTK 575

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
                   ++   M ++GF  + R +  +++ FCK G++ +AY++L  M       +V  
Sbjct: 576 AGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVAT 635

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  ++DG  ++ RLD A  L+E+    G   NVV Y+SLI GF +      A+  L+ + 
Sbjct: 636 YGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMM 695

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
            +G  P++   N L+D L K    ++AL  +  + E+K  P++YT+  L++ +C   +++
Sbjct: 696 KKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYN 755

Query: 378 LLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
                   ++ +    ++V Y  ++S   K G    A  L+      G  PD  SF  L+
Sbjct: 756 KAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALI 815

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
            G+  A +  EA  V++   +    +N     +++D L
Sbjct: 816 EGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDAL 853



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 108/485 (22%), Positives = 217/485 (44%), Gaps = 43/485 (8%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
            GRFE    ++  L   GC+    +F   L    +       L  F+ M +    PN+  
Sbjct: 332 AGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSST 390

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            NI++D+L   GRV+   ++L E +     PN L+ NI +  LCK   +     +     
Sbjct: 391 YNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESAS 450

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
           ++G  P+   +  L++   K G++ EAY+L   M+  G + +   +T LI  F    R +
Sbjct: 451 QRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKE 510

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
               +++++++ GC P++    + +    +A          + + S G  PD+  +++LI
Sbjct: 511 DGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILI 570

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKL------ 382
             L+K G   +  +++  + +     D+  + +++   C SG+    + +L ++      
Sbjct: 571 HGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQ 630

Query: 383 ---------VCGLE-------------------VEADLVVYNALLSYFCKAGFPNQAVKL 414
                    V GL                    +E ++V+Y++L+  F K G  ++A  +
Sbjct: 631 PTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLI 690

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
              M+ KG TP+ Y++  LL  L  A +I+EA+  +Q +       N + ++ +++ L  
Sbjct: 691 LEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCR 750

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
             + +KA   ++    +    +VV+YT  I GL + G   +AY L+ + K     P+A +
Sbjct: 751 VQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAAS 810

Query: 535 YRVML 539
           +  ++
Sbjct: 811 FNALI 815



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 127/581 (21%), Positives = 229/581 (39%), Gaps = 80/581 (13%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           R E    ++ ++  VG  +    F   +R   R       L   DE+      P+    N
Sbjct: 194 RPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYN 253

Query: 159 IVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
           + +D   K G VD+  K   E +     P+ +S+   +  LCK   +   +++   M  +
Sbjct: 254 VCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAE 313

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
              P    +  ++  +   GR  +AY+LL  +   G   SV ++  ++    + R++D A
Sbjct: 314 RSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEA 373

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             L+E M ++   PN  TY  +I           A+  LD +E     P+L+  N+++D 
Sbjct: 374 LSLFEVMKKDA-EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDR 432

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEA 390
           L K    ++A  +++   +    PD  T+CSL+  +   G+    + L  K++      A
Sbjct: 433 LCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGH-NA 491

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLY---------------NTMLD--------------- 420
           + VVY +L+  F   G      K++               NT +D               
Sbjct: 492 NPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIF 551

Query: 421 -----KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
                 GF PD  S+  L+ GL  A +  E  N++  +     A++A  + A+VD   ++
Sbjct: 552 EDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKS 611

Query: 476 GRCHKAIQ-----------------------------------LFRRAIVEKYPLDVVSY 500
           G+ HKA +                                   LF  A  +   L+VV Y
Sbjct: 612 GKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLY 671

Query: 501 TVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
           +  I G  + GR +EAY++  +M    + PN YT+  +L +  K   I       Q + +
Sbjct: 672 SSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKE 731

Query: 561 ARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            +   + +T   L   + +    + A     +M   GL+P+
Sbjct: 732 MKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPN 772



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 86/366 (23%), Positives = 167/366 (45%), Gaps = 4/366 (1%)

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
           +D++ ++ V+  M   G+    +    L     +  R+ +A   + +M  L    + +A+
Sbjct: 123 HDLAALEKVLEEMAVLGYGLPNQACAHLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAY 182

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
           TVLI      RR + A  L  +M + G    V  +T+L++        + A + +D ++ 
Sbjct: 183 TVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKG 242

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL 378
               PD+V +NV IDC  K G+ D A   +  L    L PD  ++ S++  +C +GR   
Sbjct: 243 SCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGE 302

Query: 379 LPKLVCGLEVEADL---VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
             +L   +E E  +     YN ++  +  AG    A KL   + ++G  P   SF  +L 
Sbjct: 303 AEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILT 362

Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
            L   RK+DEA+++++ ++  +   N+  +  I+D L   GR  +A ++           
Sbjct: 363 CLGKKRKVDEALSLFE-VMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFP 421

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
           ++++  + +  L +  + EEAY ++         P+  TY  ++    K+  +    RL 
Sbjct: 422 NLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLF 481

Query: 556 QDVIDA 561
           + ++DA
Sbjct: 482 EKMLDA 487


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 111/460 (24%), Positives = 209/460 (45%), Gaps = 8/460 (1%)

Query: 118 KAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL 177
           K + + + +  Y + +   + +  F+EM   GF P +   N ++  +      +      
Sbjct: 93  KFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFF 152

Query: 178 KETQ---LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
            E +   + +  SF I +   C+  ++    D++  +   GF PNV ++  L++  CK G
Sbjct: 153 NENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKG 212

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
            I +A  L   M  LG   +   +TVLI+G  +         ++EKM ++G  PN+ TY 
Sbjct: 213 EIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYN 272

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
            ++    +      AF   D +   G + ++V +N LI  L +    ++A  V D +   
Sbjct: 273 CVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSD 332

Query: 355 KLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQA 411
            + P+  T+ +L+   C  G+      L   L+   +   LV YN L+S FC+ G  + A
Sbjct: 333 GINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGA 392

Query: 412 VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
            K+   M ++G  P   ++  L+     +  +++AI +   +       + H ++ ++  
Sbjct: 393 AKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHG 452

Query: 472 LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
               G+ ++A +LF+  + +    + V Y   I G  + G +  A  L  +M+   + PN
Sbjct: 453 FCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPN 512

Query: 532 AYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSI 571
             +YR M+   CKER  K  +RL++ +ID+ I  D  TSI
Sbjct: 513 VASYRYMIEVLCKERKSKEAERLVEKMIDSGI--DPSTSI 550



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/387 (25%), Positives = 181/387 (46%), Gaps = 7/387 (1%)

Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
           +V  F IL+   C+ G I +++ LL  +   G S +V  +T LIDG  +   ++ A  L+
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221

Query: 279 EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
            +M + G   N  TYT LI G  +  +    F   + ++ +G  P+L  +N +++ L K 
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVY 395
           G   DA  V+D + E  +  +  T+ +L+  +C   + +   K+V  ++   +  +L+ Y
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
           N L+  FC  G   +A+ L   +  +G +P   ++  L+ G C       A  + + +  
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE 401

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL--DVVSYTVAIRGLLEGGRT 513
                +   +T ++D    +    KAIQL  R  +E+  L  DV +Y+V I G    G+ 
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQL--RLSMEELGLVPDVHTYSVLIHGFCIKGQM 459

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
            EA  L+  M      PN   Y  M+L +CKE +     +LL+++ +  +  +  +   +
Sbjct: 460 NEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYM 519

Query: 574 TKFIFKFHSSSSAVNQLVEMCNLGLIP 600
            + + K   S  A   + +M + G+ P
Sbjct: 520 IEVLCKERKSKEAERLVEKMIDSGIDP 546



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/353 (23%), Positives = 153/353 (43%), Gaps = 36/353 (10%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G  E  + +  E+ ++G V   +T+ + +   ++  +     E +++M   G  PN +  
Sbjct: 212 GEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTY 271

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQLP----NFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N VM+ L K GR     +V  E +      N +++N  +  LC+   ++    V+  M  
Sbjct: 272 NCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKS 331

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G  PN+  +  L++ FC +G++ +A  L   + + G S S+  + +L+ GF R      
Sbjct: 332 DGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSG 391

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  + ++M + G  P+ VTYT LI  F  +     A      +E  G  PD+  ++VLI 
Sbjct: 392 AAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIH 451

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLV 393
                G  ++A  ++  ++E    P+                                 V
Sbjct: 452 GFCIKGQMNEASRLFKSMVEKNCEPNE--------------------------------V 479

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
           +YN ++  +CK G   +A+KL   M +K   P+  S+  ++  LC  RK  EA
Sbjct: 480 IYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEA 532



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 113/230 (49%), Gaps = 5/230 (2%)

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKL 198
           D+M   G  PN    N ++D    +G++   + + ++ +     P+ +++NI +   C+ 
Sbjct: 327 DQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRK 386

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
            D S    ++  M  +G  P+   + IL++ F +   + +A QL   M  LG    V+ +
Sbjct: 387 GDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTY 446

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
           +VLI GF    +++ A  L++ MV+  C PN V Y ++I G+ +      A   L  +E 
Sbjct: 447 SVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEE 506

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           +  AP++  +  +I+ L K     +A  + + +++  + P S +  SL+S
Sbjct: 507 KELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDP-STSILSLIS 555



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/347 (19%), Positives = 152/347 (43%), Gaps = 4/347 (1%)

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           + V+I+ + + + L+++   + +MV NG  P    +  L+   + +  F+  +SF +  +
Sbjct: 97  YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
           S+    D+    +LI    + G  + + D+   L E    P+   + +L+   C  G   
Sbjct: 157 SK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 378 LLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
               L   +  L + A+   Y  L++   K G   Q  ++Y  M + G  P+ Y++  ++
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
             LC   +  +A  V+  +     + N   +  ++  L    + ++A ++  +   +   
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
            ++++Y   I G    G+  +A  L   +K   + P+  TY +++  FC++ +     ++
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 395

Query: 555 LQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           ++++ +  I+    T   L     +  +   A+   + M  LGL+PD
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPD 442



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/282 (20%), Positives = 133/282 (47%), Gaps = 7/282 (2%)

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           +I G + ++ F+ +     + ESE        + V+I+   +  S + ++  ++ +++  
Sbjct: 65  VISGKIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNG 124

Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYN--ALLSYFCKAGFPNQAVK 413
            VP S  F  LL+ V  S  F+         + +  L VY+   L+   C+AG   ++  
Sbjct: 125 FVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFD 184

Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
           L   + + GF+P+   +  L+ G C   +I++A +++  +       N   +T +++ L 
Sbjct: 185 LLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLF 244

Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
           + G   +  +++ +   +    ++ +Y   +  L + GRT++A+ ++ +M+   V  N  
Sbjct: 245 KNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIV 304

Query: 534 TYRVMLLSFCKERNI----KMVKRLLQDVIDARIELDYHTSI 571
           TY  ++   C+E  +    K+V ++  D I+  + + Y+T I
Sbjct: 305 TYNTLIGGLCREMKLNEANKVVDQMKSDGINPNL-ITYNTLI 345



 Score = 42.7 bits (99), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 44/225 (19%), Positives = 82/225 (36%), Gaps = 36/225 (16%)

Query: 377 SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
           SLL  L      +    +Y  +++ + ++   N ++  +N M+D GF P +  F  LL  
Sbjct: 79  SLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTF 138

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
           + G+     + N +      N +                                K  LD
Sbjct: 139 VVGS----SSFNQWWSFFNENKS--------------------------------KVVLD 162

Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
           V S+ + I+G  E G  E+++ L  ++      PN   Y  ++   CK+  I+  K L  
Sbjct: 163 VYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFF 222

Query: 557 DVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           ++    +  +  T   L   +FK            +M   G+ P+
Sbjct: 223 EMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPN 267


>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 505

 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 116/474 (24%), Positives = 209/474 (44%), Gaps = 10/474 (2%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           R++ V+ +V  + +    +  Q F   + IY    M    L+      + G  P  +  +
Sbjct: 10  RYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYS 69

Query: 159 IVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
            ++ V  K G V  G+    ++LK   +P+  +FNI + +L K + V    +V G M + 
Sbjct: 70  SMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKL 129

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
              P+V  + IL+     +GRI    +L   M   G   ++  +  ++  F    R+D A
Sbjct: 130 NVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEA 189

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             ++++MVQ G  P+ VTY  LI  F +      AF F+    S     + V +N L+  
Sbjct: 190 CDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRS---FTNEVTYNSLLSS 246

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEAD 391
           L + G     ++++  +    LV +  T+  L+  +  +GR   + +L   +   +++ D
Sbjct: 247 LGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYD 306

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
           +V  N +L    KAG    A +L+  M  KG   D  ++  L+ GL  A K+D A  +  
Sbjct: 307 IVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLL 366

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
            +  N  A N   +  ++    +      A +LF          +VVSY+  I G  + G
Sbjct: 367 EMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAG 426

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
           RT+ A  L+ +MK    PPN  TY +++    +          L+++ DA  ++
Sbjct: 427 RTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRDAGCQM 480



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/316 (23%), Positives = 133/316 (42%), Gaps = 36/316 (11%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR + V  +   +   GC     T+   +  +          + F +M + G  P+    
Sbjct: 149 GRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTY 208

Query: 158 NIVMDVLFKIGRVDLGIK-VLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
           NI++D   K G+++     V K     N +++N  L +L +  D+  + ++ G M  KG 
Sbjct: 209 NILIDAFGKTGQLERAFDFVGKSRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGL 268

Query: 217 YPNVRMFEIL-----------------------------------LNCFCKMGRIAEAYQ 241
             N   + IL                                   L+C  K GR+  A++
Sbjct: 269 VSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFE 328

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           L   M   G +     + +LI+G  R  +LD AG L  +M +NGC+PN++TY +LI  + 
Sbjct: 329 LFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYG 388

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           +    S A      ++  G AP++V ++ LI+   K G  D A+ ++  +      P+  
Sbjct: 389 KWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHV 448

Query: 362 TFCSLLSTVCLSGRFS 377
           T+  L+  +  +GRF 
Sbjct: 449 TYNLLIDCLIRAGRFG 464



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 67/304 (22%), Positives = 132/304 (43%), Gaps = 6/304 (1%)

Query: 269 RRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH 328
           RR D    L E M ++    +   + +LI  + EA M   A   L     EG  P    +
Sbjct: 9   RRYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTY 68

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCG 385
           + +I    K G   + L +Y  +L+ K VPD  TF  L+ ++  + +      +   +  
Sbjct: 69  SSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFK 128

Query: 386 LEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
           L V  D+  Y  L+      G  +  +KL+ +M  +G  P+ +++  ++     A ++DE
Sbjct: 129 LNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDE 188

Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
           A +++Q +V      +A  +  ++D   + G+  +A     ++   +   + V+Y   + 
Sbjct: 189 ACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKS---RSFTNEVTYNSLLS 245

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
            L   G  +    L+ QMK   +  N  TY +++        ++ V +L  +++D  I+ 
Sbjct: 246 SLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKY 305

Query: 566 DYHT 569
           D  T
Sbjct: 306 DIVT 309


>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Glycine max]
          Length = 693

 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 127/535 (23%), Positives = 229/535 (42%), Gaps = 63/535 (11%)

Query: 55  STLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGR--FETVRGIVGELAR 112
           ++L +    ++ALSFF W      + H  + +   I+    L     FE    ++     
Sbjct: 84  ASLASDAGSMVALSFFNWAIASSKFRHFTRLY---IACAASLISNKNFEKAHEVMQ---- 136

Query: 113 VGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDL 172
             C++K+     F  I    E   MV+E  ++    G  P+T   N V+ ++ ++G V+ 
Sbjct: 137 --CMVKS-----FAEIGRVKEAIEMVIEMHNQ----GLAPSTKTLNWVVKIVTEMGLVEY 185

Query: 173 GIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFY----------- 217
              +  E       PN +S+ + +   CKL +V      +G M+ +GF            
Sbjct: 186 AENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVR 245

Query: 218 ------------------------PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
                                   PN+  F  ++   CK G + +A+++L  M+  G   
Sbjct: 246 EFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKP 305

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN-GCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
           +V   T LIDG  +    + A  L+ K+V++    PNV+TYT++I G+   +  + A   
Sbjct: 306 NVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEML 365

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
           L  ++ +G AP+   +  LID   K G+++ A ++ + + E    P+  T+ +++  +C 
Sbjct: 366 LSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCK 425

Query: 373 SGRFSLLPK-LVCGLE--VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
            GR     K L  G    ++AD V Y  L+S  CK     QA+ L+N M+  G  PD +S
Sbjct: 426 KGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHS 485

Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
           +  L+   C  +++ E+   ++  V          +T+++      G    A++ F R  
Sbjct: 486 YTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMS 545

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
                 D ++Y   I GL +  + +EA  LY  M    + P   T   +   +CK
Sbjct: 546 DHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTLAYEYCK 600



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 82/322 (25%), Positives = 142/322 (44%), Gaps = 14/322 (4%)

Query: 136 GMVLEAFD---EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIK-----VLKETQLPNFLS 187
           G V +AF+   EM   G+ PN +    ++D L K G  +   +     V  E   PN L+
Sbjct: 286 GSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLT 345

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           +   +   C+   ++  + ++  M  +G  PN   +  L++  CK G    AY+L+ +M 
Sbjct: 346 YTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMN 405

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
             G S +V  +  ++DG  +  R+  A  + +   +NG   + VTYT LI    +     
Sbjct: 406 EEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIK 465

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A    + +   G  PD+  +  LI    +     ++   ++  +   LVP + T+ S++
Sbjct: 466 QALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMI 525

Query: 368 STVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
              C  G   L  K    +      +D + Y AL+S  CK    ++A  LY+ M++KG T
Sbjct: 526 CGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLT 585

Query: 425 PDNYSFVGLLRGLCGARKIDEA 446
           P   + V L    C   KID+ 
Sbjct: 586 PCEVTRVTLAYEYC---KIDDG 604



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 78/328 (23%), Positives = 130/328 (39%), Gaps = 4/328 (1%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL--- 177
           T+   +  Y R E           M   G  PNT     ++D   K G  +   +++   
Sbjct: 345 TYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVM 404

Query: 178 -KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
            +E   PN  ++N  +  LCK   V     V+    R G   +   + IL++  CK   I
Sbjct: 405 NEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEI 464

Query: 237 AEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSL 296
            +A  L   M+  G    ++++T LI  F R +R+  +   +E+ V+ G  P   TYTS+
Sbjct: 465 KQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSM 524

Query: 297 IKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
           I G+       +A  F   +   G A D + +  LI  L K    D+A  +YD ++E  L
Sbjct: 525 ICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEKGL 584

Query: 357 VPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYN 416
            P   T  +L    C          ++  LE +  +   N L+   C       A   ++
Sbjct: 585 TPCEVTRVTLAYEYCKIDDGCSAMVVLERLEKKLWVRTVNTLVRKLCSERKVGMAALFFH 644

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKID 444
            +LDK    +  +    +     + K D
Sbjct: 645 KLLDKDPNVNRVTIAAFMTACYESNKYD 672


>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Glycine max]
          Length = 1113

 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 125/536 (23%), Positives = 235/536 (43%), Gaps = 51/536 (9%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFL-L 124
           ALS+F   ++  +  H  ++ ++M+  + R+ GR E +  +   + +        T+L +
Sbjct: 105 ALSYFKMVSQLPNIVHTPETCNYMLEFL-RVHGRVEDMAFVFDLMQKQVINRNPNTYLTI 163

Query: 125 FLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ET 180
           F  +  +G +      A  +M + GF  N ++ N ++  L + G     +KV K    E 
Sbjct: 164 FKALSIKGGIRQAPF-ALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEG 222

Query: 181 QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAY 240
             P+  +++  +  L +  D   + D++  M   G  PN+  + I +    + GRI +AY
Sbjct: 223 LKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAY 282

Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL----------------------- 277
            +L  M   G    V  +TVLID      +LD A  L                       
Sbjct: 283 GILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKF 342

Query: 278 ------------WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL 325
                       W +M  +G +P+VVTYT L++   ++     AF  LD++   G  P+L
Sbjct: 343 GNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNL 402

Query: 326 VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCG 385
             +N LI  L  +   D+AL++++ +  L + P +Y++   +      G+     K +  
Sbjct: 403 HTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYY---GKLGDPEKALDT 459

Query: 386 LE------VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
            E      +   +   NA L    + G   +A  ++N + + G +PD+ ++  +++    
Sbjct: 460 FEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSK 519

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
           A +ID+A  +   ++      +  V  +++D L +AGR  +A Q+F R    K    VV+
Sbjct: 520 AGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVT 579

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
           Y + I GL + G+  +A  L+  MK    PPN  T+  +L   CK   + +  ++ 
Sbjct: 580 YNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMF 635



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 119/513 (23%), Positives = 215/513 (41%), Gaps = 10/513 (1%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR    + I  ++   G    + T+ + ++ Y +        +   EM   G  P+    
Sbjct: 486 GRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVV 545

Query: 158 NIVMDVLFKIGRVDLGIKV---LKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N ++D L+K GRVD   ++   LK+ +L P  +++NI +  L K   +    D+ G M  
Sbjct: 546 NSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKE 605

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G  PN   F  LL+C CK   +  A ++   M  +  S  V  +  +I G  +  R   
Sbjct: 606 SGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGY 665

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF-LDMLESEGHAPDLVFHNVLI 332
           A + + +M +   SP+ VT  +L+ G ++      A    ++ +   G          L+
Sbjct: 666 AFWFYHQM-KKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELM 724

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF----SLLPKLVCGLEV 388
           +C+      ++A+   +GL+   +  D      L+  +C   +      L  K    L  
Sbjct: 725 ECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGT 784

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
                 YN L+           A+KL+  M + G  P+ +++  LL     +++IDE   
Sbjct: 785 HPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFE 844

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           +Y  ++      N   H  I+  L+++   +KA+ L+   I   +     +Y   I GLL
Sbjct: 845 LYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLL 904

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
           + GR+EEA  ++ +M      PN   Y +++  F K  N+ +   L + +I   I  D  
Sbjct: 905 KAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLK 964

Query: 569 TSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           +   L + +F       AV+   E+   GL PD
Sbjct: 965 SYTILVECLFMTGRVDDAVHYFEELKLTGLDPD 997



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 103/415 (24%), Positives = 179/415 (43%), Gaps = 20/415 (4%)

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
            +G M + GF  N   +  L+    + G   EA ++   MI+ G   S+  ++ L+    
Sbjct: 179 ALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALG 238

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
           R R       L E+M   G  PN+ TYT  I+    A     A+  L  +E EG  PD+V
Sbjct: 239 RRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVV 298

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL 386
            + VLID L   G  D A ++Y  +      PD  T+ +L+S     G    + +    +
Sbjct: 299 TYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEM 358

Query: 387 EVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
           E +    D+V Y  L+   CK+G  +QA  + + M  +G  P+ +++  L+ GL   R++
Sbjct: 359 EADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRL 418

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           DEA+ ++  +     A  A+ +   +D   + G   KA+  F +         + +   +
Sbjct: 419 DEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNAS 478

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           +  L E GR  EA  +++ + +  + P++ TY +M+  + K   I    +LL +++    
Sbjct: 479 LYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGC 538

Query: 564 ELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTPV 618
           E D                    VN L++        DE W+  G L D  + P 
Sbjct: 539 EPDI-----------------IVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPT 576



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 128/561 (22%), Positives = 225/561 (40%), Gaps = 64/561 (11%)

Query: 60  CPSDLIALSFFI--WCA-----KQRDYFHDVQSFDHMISVVTRLT--------GRFETVR 104
           C  D++  +  I   CA     K ++ +  +++  H   +VT +T        G  ETV+
Sbjct: 293 CGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVK 352

Query: 105 GIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVL 164
               E+   G      T+ + +    +        +  D M   G  PN    N ++  L
Sbjct: 353 RFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGL 412

Query: 165 FKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV 220
             + R+D  +++    +     P   S+ + +    KL D     D    M ++G  P++
Sbjct: 413 LNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSI 472

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
                 L    +MGRI EA  +   +   G S     + +++  + +  ++D A  L  +
Sbjct: 473 AACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTE 532

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           M+  GC P+++   SLI    +A     A+     L+    AP +V +N+LI  L K G 
Sbjct: 533 MLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGK 592

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV---EADLVVYNA 397
              ALD++  + E    P++ TF +LL  +C +    L  K+ C + +     D++ YN 
Sbjct: 593 LLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNT 652

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI---------- 447
           ++    K G    A   Y+ M  K  +PD+ +   LL G+    ++++AI          
Sbjct: 653 IIYGLIKEGRAGYAFWFYHQM-KKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQS 711

Query: 448 -----NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ-------LFRRAIVEKYPL 495
                N   G +M    + A +  AI     E   C+   Q       L R    +K  L
Sbjct: 712 GLQTSNQVWGELMECILIEAEIEEAI--SFAEGLVCNSICQDDNLILPLIRVLCKQKKAL 769

Query: 496 DVV-----------------SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
           D                   SY   + GLL    TE A  L+ +MK+    PN +TY ++
Sbjct: 770 DAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLL 829

Query: 539 LLSFCKERNIKMVKRLLQDVI 559
           L +  K + I  +  L  +++
Sbjct: 830 LDAHGKSKRIDELFELYNEML 850



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 119/551 (21%), Positives = 212/551 (38%), Gaps = 86/551 (15%)

Query: 98   GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
            G+      + G +   GC     TF   L    + +   + L+ F  M     +P+    
Sbjct: 591  GKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTY 650

Query: 158  NIVMDVLFKIGRVDLGI---KVLKETQLPNFLSFNIALCNLCKLNDVSN-VKDVIGMMVR 213
            N ++  L K GR          +K+   P+ ++    L  + K   V + +K V+  + +
Sbjct: 651  NTIIYGLIKEGRAGYAFWFYHQMKKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQ 710

Query: 214  KGFYPNVRMFEILLNC-----------------------------------FCKMGRIAE 238
             G   + +++  L+ C                                    CK  +  +
Sbjct: 711  SGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALD 770

Query: 239  AYQLLG-LMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLI 297
            A +L      +LGT  +  ++  L+DG       + A  L+ +M   GC PN+ TY  L+
Sbjct: 771  AKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLL 830

Query: 298  KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
                ++K     F   + +   G  P+++ HN++I  L K  S + ALD+Y  ++     
Sbjct: 831  DAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFS 890

Query: 358  PDSYTFCSLLSTVCLSGR-------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQ 410
            P   T+  L+  +  +GR       F  +P   C    + +  +YN L++ F KAG  N 
Sbjct: 891  PTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQC----KPNCAIYNILINGFGKAGNVNI 946

Query: 411  AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
            A  L+  M+ +G  PD  S+                                   T +V+
Sbjct: 947  ACDLFKRMIKEGIRPDLKSY-----------------------------------TILVE 971

Query: 471  RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
             L   GR   A+  F    +     D VSY + I GL +  R EEA  L+S+MK+  + P
Sbjct: 972  CLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISP 1031

Query: 531  NAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQL 590
              YTY  ++L F     +    ++ +++    +E +  T   L +   K  +   A +  
Sbjct: 1032 ELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVF 1091

Query: 591  VEMCNLGLIPD 601
             +M  +G  P+
Sbjct: 1092 KKMMIVGCSPN 1102



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 158/338 (46%), Gaps = 8/338 (2%)

Query: 142  FDEMGR-FGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLC 196
            FD+  +  G  P   + N +MD L      +  +K+  E +     PN  ++N+ L    
Sbjct: 775  FDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHG 834

Query: 197  KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
            K   +  + ++   M+ +G  PN+    I+++   K   I +A  L   +I+   S +  
Sbjct: 835  KSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPC 894

Query: 257  AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
             +  LI G  +  R + A  ++E+M    C PN   Y  LI GF +A   +IA      +
Sbjct: 895  TYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRM 954

Query: 317  ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
              EG  PDL  + +L++CL   G  DDA+  ++ L    L PD+ ++  +++ +  S R 
Sbjct: 955  IKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRL 1014

Query: 377  SLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
                 L   ++   +  +L  YNAL+ +F  AG  +QA K++  +   G  P+ +++  L
Sbjct: 1015 EEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNAL 1074

Query: 434  LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
            +RG   +   D A +V++ +++   + NA     + ++
Sbjct: 1075 IRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQLPNK 1112



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 145/303 (47%), Gaps = 7/303 (2%)

Query: 138  VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALC 193
             L+ F EM   G  PN F  N+++D   K  R+D   ++  E       PN ++ NI + 
Sbjct: 807  ALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIIS 866

Query: 194  NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
             L K N ++   D+   ++   F P    +  L+    K GR  EA ++   M       
Sbjct: 867  ALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKP 926

Query: 254  SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
            +   + +LI+GF +   +++A  L+++M++ G  P++ +YT L++          A  + 
Sbjct: 927  NCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYF 986

Query: 314  DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
            + L+  G  PD V +N++I+ L K    ++AL ++  +    + P+ YT+ +L+     +
Sbjct: 987  EELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNA 1046

Query: 374  GRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
            G      K+   L+   +E ++  YNAL+    K+G  ++A  ++  M+  G +P+  +F
Sbjct: 1047 GMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTF 1106

Query: 431  VGL 433
              L
Sbjct: 1107 AQL 1109



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 125/297 (42%), Gaps = 39/297 (13%)

Query: 109  ELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVL---- 164
            E+   GC     T+ L L  + + +    + E ++EM   G  PN    NI++  L    
Sbjct: 813  EMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSN 872

Query: 165  -------------------------------FKIGRVDLGIKVLKETQ----LPNFLSFN 189
                                            K GR +  +K+ +E       PN   +N
Sbjct: 873  SINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYN 932

Query: 190  IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
            I +    K  +V+   D+   M+++G  P+++ + IL+ C    GR+ +A      +   
Sbjct: 933  ILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLT 992

Query: 250  GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
            G      ++ ++I+G  + RRL+ A  L+ +M   G SP + TY +LI  F  A M   A
Sbjct: 993  GLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQA 1052

Query: 310  FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
                + L+  G  P++  +N LI   SK G+ D A  V+  ++ +   P++ TF  L
Sbjct: 1053 GKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQL 1109


>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 909

 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 126/476 (26%), Positives = 219/476 (46%), Gaps = 13/476 (2%)

Query: 137 MVLEAFD---EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFN 189
           +V EAF    ++G  G  PN FA N ++D L K  R D   ++ KE       PN +++ 
Sbjct: 341 LVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYA 400

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
           I +  LCK   + +   +   M  KG    V  +  L+N +CK G +  A  LL  M+  
Sbjct: 401 ILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKE 460

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           G + +  +++ LI G  R   L     L  +M + G + N  T+T+LI GF + K    A
Sbjct: 461 GLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEA 520

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
               D +      P+ V  NV+I+    +G+   A  +YD ++E+ L PD+YT+ SL+S 
Sbjct: 521 ARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 580

Query: 370 VCLSGRFSLLPKLVCGLEVEADLVVYN----ALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
           +CL+   S   + V  LE  +  V+ N    ALL  F + G   +   L++ M  +G   
Sbjct: 581 LCLTSGVSKANEFVADLE-NSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKL 639

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           D  SF  ++         +++  +++ +       +   +T ++D L +     +A+  +
Sbjct: 640 DLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCW 699

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
            + +V+ Y  + V++TV I  L + G    A +L  +M    V PN +TY   L  F  E
Sbjct: 700 DQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATE 759

Query: 546 RNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            +++  K L   ++   +      +I L K + K      A++ + ++   G  PD
Sbjct: 760 GDMEKAKDLHSAMLQGHLASIVSFNI-LIKGLCKAGKIQEAIDLMSKITESGFSPD 814



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 109/449 (24%), Positives = 206/449 (45%), Gaps = 8/449 (1%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G  +  RG++  + + G    A ++   +    R       +E   EM   G   N +  
Sbjct: 445 GSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTF 504

Query: 158 NIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
             +++   K  ++D    L  K++    +PN ++FN+ +   C + ++     +   MV 
Sbjct: 505 TALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVE 564

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G  P+   +  L++  C    +++A + +  +      L+  + T L+ GF R  R   
Sbjct: 565 MGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTE 624

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
             +LW++M   G   ++V++T ++   ++      +      ++ +G  PD +F+  +ID
Sbjct: 625 TYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMID 684

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF---SLLPKLVCGLEVEA 390
            LSK  +   AL+ +D ++     P++ T   L++ +C SG      LL K +    V  
Sbjct: 685 ALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLP 744

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           +   YN  L YF   G   +A  L++ ML +G      SF  L++GLC A KI EAI++ 
Sbjct: 745 NKFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLM 803

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
             I  +  + +   ++ I+  L + G  +KA +L+   + +    DVV+Y + IR     
Sbjct: 804 SKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVH 863

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVML 539
           G +++A  +Y+ M    V PN  TYR +L
Sbjct: 864 GESDKALGIYTNMIRSGVQPNWDTYRALL 892



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 112/493 (22%), Positives = 204/493 (41%), Gaps = 44/493 (8%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           +F   R +  ++ + G  +    +   +R Y               M   G   +    N
Sbjct: 201 QFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYN 260

Query: 159 IVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
           ++M  L K  RV   ++V    +      + +++   +   C++ ++     +   M+R 
Sbjct: 261 VLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRL 320

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           GF P+      +++   K   + EA+ L   +  LG   +V A+  LID   +  R D A
Sbjct: 321 GFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDA 380

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             L+++M   G  PN VTY  LI    +  M   A    D +  +G    +  +N LI+ 
Sbjct: 381 DRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLING 440

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----------------- 377
             K GS D A  +  G+++  L P + ++  L++ +C +G  S                 
Sbjct: 441 YCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWN 500

Query: 378 --LLPKLVCGL-------------------EVEADLVVYNALLSYFCKAGFPNQAVKLYN 416
                 L+ G                     V  + V +N ++  +C  G   +A +LY+
Sbjct: 501 NYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYD 560

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV-NAHVHTAIVDRLIEA 475
            M++ G  PDNY++  L+ GLC    + +A N +   + N+ AV N    TA++      
Sbjct: 561 QMVEMGLKPDNYTYRSLISGLCLTSGVSKA-NEFVADLENSYAVLNNFSLTALLYGFFRE 619

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
           GR  +   L+    V    LD+VS+T+ +   L+    E++ +L+ +MK   V P+   Y
Sbjct: 620 GRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFY 679

Query: 536 RVMLLSFCKERNI 548
             M+ +  KE N+
Sbjct: 680 TCMIDALSKEENM 692



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 101/440 (22%), Positives = 189/440 (42%), Gaps = 3/440 (0%)

Query: 168 GRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILL 227
           G   L +++  E    + + +N+ +  LCK   V    +V  +MV  G   +   +  L+
Sbjct: 239 GARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLV 298

Query: 228 NCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCS 287
             FC+M  +  A ++   MI LG   S    + +ID  R+   ++ A  L  K+   G  
Sbjct: 299 YGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMV 358

Query: 288 PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
           PNV  Y +LI    + + F  A      +   G  P+ V + +LI  L K G  +DAL +
Sbjct: 359 PNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCL 418

Query: 348 YDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCK 404
           +D + +  +    Y + SL++  C  G       L+ G+  E        Y+ L++  C+
Sbjct: 419 FDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCR 478

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV 464
            G  +  ++L+  M ++G   +NY+F  L+ G C  +K+DEA  ++  ++ +N   N   
Sbjct: 479 NGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVT 538

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
              +++     G   KA QL+ + +      D  +Y   I GL       +A    + ++
Sbjct: 539 FNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLE 598

Query: 525 HIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSS 584
           +     N ++   +L  F +E        L  ++    ++LD  +   +     K H   
Sbjct: 599 NSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKE 658

Query: 585 SAVNQLVEMCNLGLIPDEMW 604
            +     EM   G+ PD+++
Sbjct: 659 KSCVLFREMKEQGVKPDDIF 678



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/381 (23%), Positives = 170/381 (44%), Gaps = 3/381 (0%)

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           L +L K+   +  +D+   M++ G + +  ++   +  +C+   +  A  L+  M + G 
Sbjct: 193 LFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGV 252

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
             S   + VL+ G  +  R+  A  +   MV  G + + VTY +L+ GF   +   +A  
Sbjct: 253 KASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALR 312

Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
               +   G  P     + +ID L K    ++A  +   L +L +VP+ + + +L+  +C
Sbjct: 313 ITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLC 372

Query: 372 LSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
            + RF    +L   + G  +E + V Y  L+   CK G    A+ L++ M DKG     Y
Sbjct: 373 KNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVY 432

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
            +  L+ G C    +D A  +  G+V       A  ++ ++  L   G     ++L R  
Sbjct: 433 PYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREM 492

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
                  +  ++T  I G  +  + +EA  L+ +M    V PN  T+ VM+  +C   NI
Sbjct: 493 AERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNI 552

Query: 549 KMVKRLLQDVIDARIELDYHT 569
           +   +L   +++  ++ D +T
Sbjct: 553 RKAFQLYDQMVEMGLKPDNYT 573



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 88/401 (21%), Positives = 173/401 (43%), Gaps = 48/401 (11%)

Query: 245 LMITLGTSLSVNAWTV--LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           L ++L + ++VN +T   ++    ++R+  +A  L++KM+Q+G   +   YT+ I+ + E
Sbjct: 174 LGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCE 233

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
           ++    A   +  +ESEG     V +NVL+  L K     +A++V + ++ + +  D  T
Sbjct: 234 SRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVT 293

Query: 363 FCSLLSTVC---------------------------------------LSGRFSLLPKLV 383
           + +L+   C                                       +   FSL  KL 
Sbjct: 294 YRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKL- 352

Query: 384 CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
             L +  ++  YNAL+   CK    + A +L+  M  +G  P+  ++  L+  LC    I
Sbjct: 353 GDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMI 412

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           ++A+ ++  +      V  + + ++++   + G   +A  L    + E       SY+  
Sbjct: 413 EDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPL 472

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           I GL   G       L+ +M    +  N YT+  ++  FCK++ +    RL   +ID+ +
Sbjct: 473 IAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNV 532

Query: 564 ---ELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
              E+ ++  I     +     +    +Q+VEM   GL PD
Sbjct: 533 IPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEM---GLKPD 570



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/279 (22%), Positives = 126/279 (45%), Gaps = 5/279 (1%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GRF     +  E+A  G  +   +F + +    +          F EM   G  P+    
Sbjct: 620 GRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFY 679

Query: 158 NIVMDVLFK----IGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
             ++D L K    I  ++   +++ +   PN ++  + + NLCK   + + + +   M+ 
Sbjct: 680 TCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLA 739

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
               PN   +   L+ F   G + +A  L   M+  G   S+ ++ +LI G  +  ++  
Sbjct: 740 GNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQE 798

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L  K+ ++G SP+ ++Y+++I    +    + AF   + +  +G  PD+V +N+ I 
Sbjct: 799 AIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIR 858

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
             +  G  D AL +Y  ++   + P+  T+ +LLS + L
Sbjct: 859 WCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISL 897



 Score = 45.4 bits (106), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 40/184 (21%), Positives = 71/184 (38%), Gaps = 35/184 (19%)

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
           L  G T + Y+   +L  L   R+   A +++  ++ +   ++ +V+TA +    E+   
Sbjct: 178 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 237

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
             A  L  R   E      V Y V + GL +  R +EA  + + M +I V  +  TYR +
Sbjct: 238 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 297

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGL 598
           +  FC+   ++M  R+  D+I                                    LG 
Sbjct: 298 VYGFCRMEELEMALRITHDMI-----------------------------------RLGF 322

Query: 599 IPDE 602
           +P E
Sbjct: 323 VPSE 326


>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera]
 gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 126/528 (23%), Positives = 221/528 (41%), Gaps = 66/528 (12%)

Query: 50  PHIVHSTLLNCPSDLIALSFFIWCAKQRDYFH---------------------DVQSFDH 88
           PH     L N PS     S   +C     ++                      D+ +F+ 
Sbjct: 162 PHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNK 221

Query: 89  MISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRF 148
           +I  + R  G  +    ++ ++ + G      T  +F++ + +  M    +   D +GR 
Sbjct: 222 LIHTLCR-KGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVGR- 279

Query: 149 GFTPNTFARNIVMDVL---FKIGRVDLGI-KVLKETQLPNFLSFNIALCNLCKLNDVSNV 204
           G TP+    N ++  L   FK+   +  + K++ E   P+  ++N  +   CKL  + N 
Sbjct: 280 GLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNA 339

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
             ++     KGF P+   +  L+N  C+ G I  A  +    +  G   ++     L+ G
Sbjct: 340 DQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKG 399

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
             +   +  A  L  +M +NGCSP++ TY  +I G  +    S A + +    ++GH PD
Sbjct: 400 LSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPD 459

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP---K 381
           +   N LID   K    D+A+++ D +    + PD  T+ S+L+ +C +G++  +    K
Sbjct: 460 VFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFK 519

Query: 382 LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
           L+       +++ YN L   FCKA    +A+ L   M +KG TPD  +F  L++G C   
Sbjct: 520 LMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNG 579

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE-KYPLDVVSY 500
            +D                                    A QLF+R   + K+   + +Y
Sbjct: 580 DLD-----------------------------------GAYQLFKRVDEQYKFSHTIATY 604

Query: 501 TVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
            + I           A  L+++M      P++YTYRVM+  FCK  NI
Sbjct: 605 NIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNI 652



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 128/566 (22%), Positives = 246/566 (43%), Gaps = 48/566 (8%)

Query: 45  PIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVR 104
           P +L  H+  + +    + L AL  F    K+  + H + ++  MI  +    G FE + 
Sbjct: 3   PALLPKHVA-AVVKYQKNPLKALEIFNSVKKEDGFKHTLLTYKGMIEKLG-FHGEFEAME 60

Query: 105 GIVGEL-ARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDV 163
            ++ E    +   +    ++  +R Y R       ++ F+ M  F   P+  + N +M++
Sbjct: 61  EVLAETRMNIDNGLLEGVYIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNI 120

Query: 164 LFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMM-------- 211
           L +    D   KV    +    +P+  +F I + + C+ +     + ++  M        
Sbjct: 121 LVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESS 180

Query: 212 ------VRKGFY---------------------PNVRMFEILLNCFCKMGRIAEAYQLLG 244
                 V  GFY                     P++  F  L++  C+ G + E+ +LL 
Sbjct: 181 AVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLN 240

Query: 245 LMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
            ++  G S ++    + I GF +   L+ A  L +  V  G +P+V+TY +LI G  +  
Sbjct: 241 KVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDG-VGRGLTPDVITYNTLICGLCKNF 299

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVY-DGLLELKLVPDSYTF 363
               A  +L  + +EG+ PD   +N +ID   K+G   +A  +  DG  +   VPD  T+
Sbjct: 300 KVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFK-GFVPDESTY 358

Query: 364 CSLLSTVCLSGRFSLLPKLVC-GLE--VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
           CSL++ +C  G       +    +E  ++ +LV+ N L+    + G   QA+KL N M +
Sbjct: 359 CSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSE 418

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
            G +PD +++  ++ GLC    + +A N+    +      +      ++D   +  +   
Sbjct: 419 NGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDN 478

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
           AI++  R        DV++Y   + GL + G+ E+    +  M      PN  TY ++  
Sbjct: 479 AIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTE 538

Query: 541 SFCKERNIKMVKRLLQDVIDARIELD 566
           SFCK R ++    L++++ +  +  D
Sbjct: 539 SFCKARKVEEALNLIEEMQNKGLTPD 564



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/355 (23%), Positives = 159/355 (44%), Gaps = 50/355 (14%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCN-----LCKLNDVSN 203
           GF P+      +++ L + G +D  I V  E  +   L  N+ LCN     L +   +  
Sbjct: 350 GFVPDESTYCSLINGLCQDGDIDRAINVFNEA-MEKGLKPNLVLCNTLVKGLSQQGLILQ 408

Query: 204 VKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLID 263
              ++  M   G  P++  + +++N  CK+G +++A  L+   I  G    V  +  LID
Sbjct: 409 ALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLID 468

Query: 264 GFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP 323
           G+ +  +LD A  + ++M  +G SP+V+TY S++ G  +A  +        ++  +G  P
Sbjct: 469 GYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVP 528

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC----LSGRFSLL 379
           +++ +N+L +   K    ++AL++ + +    L PD   F +L+   C    L G + L 
Sbjct: 529 NIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLF 588

Query: 380 PKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG--- 436
            ++    +    +  YN +++ F      N A KL+N M + GF+PD+Y++  ++ G   
Sbjct: 589 KRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCK 648

Query: 437 --------------------------------LCGARKIDEAIN-----VYQGIV 454
                                           LC  R++ EA+      V++GIV
Sbjct: 649 TGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIV 703



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/403 (20%), Positives = 172/403 (42%), Gaps = 5/403 (1%)

Query: 204 VKDVIGMMVRKGFY---PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
           +++ + +  R  F+   P+V+ +  ++N   +     +A+++   M   G    V  +T+
Sbjct: 92  IQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTI 151

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
            +  F R  R   A  L   M   GC  + V Y ++I GF E      A    + +   G
Sbjct: 152 RMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLG 211

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
             PD++  N LI  L + G   ++  + + +L+  + P+ +T    +   C     +   
Sbjct: 212 ICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAI 271

Query: 381 KLVCGL--EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
           +L+ G+   +  D++ YN L+   CK     +A      M+++G+ PD +++  ++ G C
Sbjct: 272 RLLDGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYC 331

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
               +  A  + +         +   + ++++ L + G   +AI +F  A+ +    ++V
Sbjct: 332 KLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLV 391

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
                ++GL + G   +A  L ++M      P+ +TY +++   CK   +     L+ D 
Sbjct: 392 LCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDA 451

Query: 559 IDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           I      D  T   L     K     +A+  +  M N G+ PD
Sbjct: 452 IAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPD 494



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 125/275 (45%), Gaps = 21/275 (7%)

Query: 106 IVGELARVGCVIKAQ----------------TFLLFLRIYWRGEMYGMVLEAFDEMGRFG 149
           ++  L ++GCV  A                 TF   +  Y +       +E  D M   G
Sbjct: 431 VINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHG 490

Query: 150 FTPNTFARNIVMDVLFKIGRVD--LG-IKVLKETQ-LPNFLSFNIALCNLCKLNDVSNVK 205
            +P+    N +++ L K G+ +  +G  K++ E   +PN +++NI   + CK   V    
Sbjct: 491 VSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEAL 550

Query: 206 DVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI-TLGTSLSVNAWTVLIDG 264
           ++I  M  KG  P+V  F  L+  FC  G +  AYQL   +      S ++  + ++I+ 
Sbjct: 551 NLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINA 610

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
           F     ++MA  L+ KM +NG SP+  TY  +I GF +    +  +SFL +   +G  P 
Sbjct: 611 FAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPS 670

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
           L     +++CL       +A+ +   ++   +VP+
Sbjct: 671 LTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPE 705



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 50/217 (23%), Positives = 90/217 (41%), Gaps = 8/217 (3%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV +++ +++ + +  G++E V G    +   GCV    T+ +    + +       L  
Sbjct: 494 DVITYNSILNGLCK-AGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNL 552

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLC----- 196
            +EM   G TP+      +M      G +D   ++ K        S  IA  N+      
Sbjct: 553 IEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFA 612

Query: 197 -KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
            KLN ++  + +   M   GF P+   + ++++ FCK G I   Y  L + I  G   S+
Sbjct: 613 GKLN-MNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSL 671

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVT 292
             +  +++     RR+  A  +   MV  G  P VV 
Sbjct: 672 TTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEVVN 708


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 129/551 (23%), Positives = 236/551 (42%), Gaps = 31/551 (5%)

Query: 60  CPSDLIALSFFI-WCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIK 118
           C  D++A S  I    K+ D       F  M+     +   F T   +V  L +   + K
Sbjct: 215 CSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQ--RGIPPDFVTYSSVVHALCKARAMDK 272

Query: 119 AQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK 178
           A+ FL                    +M   G  PN +  N ++      G+    ++V K
Sbjct: 273 AEAFL-------------------RQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFK 313

Query: 179 ETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
           E +    LP+ ++ ++ + +LCK   +   +DV   M  KG  PNV  + I+LN +   G
Sbjct: 314 EMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKG 373

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
            + +   L  LM+  G +  +  + VLI  +     LD A  ++ +M  +G  P+VVTY 
Sbjct: 374 CLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYR 433

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
           ++I           A    + +  +G APD   ++ LI      GS   A ++   ++  
Sbjct: 434 TVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNN 493

Query: 355 KLVPDSYTFCSLLSTVCLSGRF---SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQA 411
            +  D   F S+++ +C  GR      +  L   + +    VVY+ L+  +C  G   +A
Sbjct: 494 GMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKA 553

Query: 412 VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
           +++++ M+  G  P++  +  L+ G C   +IDE +++++ ++      +  ++  I+D 
Sbjct: 554 LRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDG 613

Query: 472 LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
           L EAGR   A   F         ++  +Y + +RGL +    +EA  L+ +++ + V  N
Sbjct: 614 LFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKIN 673

Query: 532 AYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT-SIRLTKFIFKFHSSSSAVNQL 590
             T   M+    + R ++  K L   +  + +     T SI +T  I K      A +  
Sbjct: 674 IITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLI-KEGLVEEAEDMF 732

Query: 591 VEMCNLGLIPD 601
             M N G  PD
Sbjct: 733 SSMQNAGCEPD 743



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 104/460 (22%), Positives = 202/460 (43%), Gaps = 45/460 (9%)

Query: 150 FTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVK 205
            +P +    I+MD   +  R +L +    ++L+     N +  N  L   C+        
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEAL 166

Query: 206 DVIGMMVRK-GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT--SLSVNAWTVLI 262
           D++     + G  P+V  + ILL   C  G+  +A  LL +M   G   S  V A++ +I
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVI 226

Query: 263 DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
           DGF +   ++ A  L+++MVQ G  P+ VTY+S++    +A+    A +FL  + ++G  
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 286

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR------- 375
           P+   +N LI   S  G + +A+ V+  +    ++PD  T   L+ ++C  G+       
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 346

Query: 376 -------------FSL------------------LPKLVCGLEVEADLVVYNALLSYFCK 404
                        FS                   L  L+ G  +  D+  +N L+  +  
Sbjct: 347 FDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYAN 406

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV 464
            G  ++A+ ++N M D G  PD  ++  ++  LC   K+D+A+  +  ++    A + + 
Sbjct: 407 CGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 466

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
           +  ++      G   KA +L    +     LD+V ++  I  L + GR  +A  ++    
Sbjct: 467 YHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTV 526

Query: 525 HIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
           ++ + P A  Y +++  +C    ++   R+   ++ A IE
Sbjct: 527 NVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIE 566



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 92/392 (23%), Positives = 173/392 (44%), Gaps = 16/392 (4%)

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA-GY 276
           P    + IL++C  +  R   A    G ++  G  +++     L+ GF   +R D A   
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDI 168

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH--APDLVFHNVLIDC 334
           L  +  + GC P+V +Y+ L+K   +      A   L M+   G   +PD+V ++ +ID 
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDG 228

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC----LSGRFSLLPKLVCGLEVEA 390
             K G  + A D++  +++  + PD  T+ S++  +C    +    + L ++V    V  
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMV-NKGVLP 287

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           +   YN L+  +   G   +AV+++  M      PD  +   L+  LC   KI EA +V+
Sbjct: 288 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVF 347

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
             + M     N   +T +++     G       LF   + +    D+ ++ V I+     
Sbjct: 348 DTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANC 407

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD---Y 567
           G  ++A I++++M+   V P+  TYR ++ + C+   +         +ID  +  D   Y
Sbjct: 408 GMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAY 467

Query: 568 HTSIRLTKFIFKFHSSSSAVNQLV-EMCNLGL 598
           H  I+     F  H S     +L+ E+ N G+
Sbjct: 468 HCLIQG----FCTHGSLLKAKELISEIMNNGM 495



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 76/321 (23%), Positives = 140/321 (43%), Gaps = 6/321 (1%)

Query: 287 SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALD 346
           SP   TY  L+     A    +A +F   L   G   +++  N L+    +    D+ALD
Sbjct: 108 SPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALD 167

Query: 347 VY-DGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV-----CGLEVEADLVVYNALLS 400
           +      EL  VPD +++  LL ++C  G+      L+      G     D+V Y+ ++ 
Sbjct: 168 ILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVID 227

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
            F K G  N+A  L+  M+ +G  PD  ++  ++  LC AR +D+A    + +V      
Sbjct: 228 GFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLP 287

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
           N   +  ++      G+  +A+++F+         DVV+ ++ +  L + G+ +EA  ++
Sbjct: 288 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVF 347

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKF 580
             M      PN ++Y +ML  +  +  +  +  L   ++   I  D +T   L K     
Sbjct: 348 DTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANC 407

Query: 581 HSSSSAVNQLVEMCNLGLIPD 601
                A+    EM + G+ PD
Sbjct: 408 GMLDKAMIIFNEMRDHGVKPD 428



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 57/279 (20%), Positives = 112/279 (40%), Gaps = 32/279 (11%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D+  F  +I+ + +L GR    + I      VG    A  + + +  Y         L  
Sbjct: 498 DIVFFSSIINNLCKL-GRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRV 556

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDV 201
           FD M   G  PN      +++   KIGR+D G+ + +E                      
Sbjct: 557 FDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFRE---------------------- 594

Query: 202 SNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVL 261
                    M++KG  P+  ++ I+++   + GR   A      M   G +++   + ++
Sbjct: 595 ---------MLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIV 645

Query: 262 IDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH 321
           + G  + R  D A +L++++       N++T  ++I G  + +    A      +   G 
Sbjct: 646 LRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGL 705

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
            P +V ++++I  L K G  ++A D++  +      PDS
Sbjct: 706 VPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDS 744


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 119/508 (23%), Positives = 224/508 (44%), Gaps = 39/508 (7%)

Query: 101 ETVRGIVGELARVGCVIKAQTFLLFLRI---YWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           + V   V +  R+ C+      + F +I   + + + Y   +     +   G  P+    
Sbjct: 38  QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97

Query: 158 NIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           NI+++    +G++  G     K+LK    P+ ++ N  +  LC    V         ++ 
Sbjct: 98  NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +GF  N   +  L+N  CK+G    A +LL  +    T  +V  ++ +ID   + + +  
Sbjct: 158 QGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSE 217

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L+ +M   G S +VVTY++LI GF        A   L+ +  +   P++  +N+L+D
Sbjct: 218 AYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVD 277

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLV 393
            L K G   +A  V   +L+  + PD  T+ +L     + G F                +
Sbjct: 278 ALCKEGKVKEAKSVLAVMLKACVKPDVITYSTL-----MDGYF----------------L 316

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
           VY              +A  ++N M   G TPD +++  L+ G C  + +DEA+N+++ +
Sbjct: 317 VYEV-----------KKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEM 365

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
              N       +++++D L ++GR      L         P DV++Y+  I GL + G  
Sbjct: 366 HQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHL 425

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
           + A  L+++MK   + PN +T+ ++L   CK   +K  + + QD++     L+ +T   +
Sbjct: 426 DRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVM 485

Query: 574 TKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
                K      A+  L +M + G IP+
Sbjct: 486 INGHCKQGLLEEALTMLSKMEDNGCIPN 513



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/428 (24%), Positives = 198/428 (46%), Gaps = 42/428 (9%)

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCN 194
           L   D++   GF  N  +   +++ + KIG     IK+L++       PN   ++  +  
Sbjct: 149 LHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDA 208

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           LCK   VS    +   M  KG   +V  +  L+  FC  G++ EA  LL  M+    + +
Sbjct: 209 LCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPN 268

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           V  + +L+D   +  ++  A  +   M++    P+V+TY++L+ G+        A    +
Sbjct: 269 VYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFN 328

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            +   G  PD+  + +LI+   K    D+AL+++  + +  +VP   T+ SL+  +C SG
Sbjct: 329 AMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSG 388

Query: 375 RFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
           R   +  L+  +      AD++ Y++L+   CK G  ++A+ L+N M D+   P+ ++F 
Sbjct: 389 RIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFT 448

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            LL GLC                                   + GR   A ++F+  + +
Sbjct: 449 ILLDGLC-----------------------------------KGGRLKDAQEVFQDLLTK 473

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
            Y L+V +Y V I G  + G  EEA  + S+M+     PNA+T+  ++++  K+      
Sbjct: 474 GYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKA 533

Query: 552 KRLLQDVI 559
           ++LL+ +I
Sbjct: 534 EKLLRQMI 541



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 101/408 (24%), Positives = 193/408 (47%), Gaps = 22/408 (5%)

Query: 61  PSDLIALSFFI--WC----AKQRDYFHD---VQSFD-HMISVVTRLTG--RFETVRGIVG 108
           P D + L+  I   C     K+  +FHD    Q F  + +S  T + G  +    RG + 
Sbjct: 126 PPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIK 185

Query: 109 ELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA---FDEMGRFGFTPNTFARNIVMDVLF 165
            L ++   +      ++  I      Y +V EA   F EM   G + +    + ++    
Sbjct: 186 LLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFC 245

Query: 166 KIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
             G++   I +L E  L    PN  ++NI +  LCK   V   K V+ +M++    P+V 
Sbjct: 246 IEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVI 305

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            +  L++ +  +  + +A  +   M  +G +  V+ +T+LI+GF + + +D A  L+++M
Sbjct: 306 TYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEM 365

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
            Q    P +VTY+SLI G  ++      +  +D +   G   D++ ++ LID L K G  
Sbjct: 366 HQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHL 425

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNAL 398
           D A+ +++ + + ++ P+ +TF  LL  +C  GR     ++   L  +    ++  YN +
Sbjct: 426 DRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVM 485

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
           ++  CK G   +A+ + + M D G  P+ ++F  ++  L    + D+A
Sbjct: 486 INGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKA 533



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 87/339 (25%), Positives = 147/339 (43%), Gaps = 42/339 (12%)

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
           ++ +D A   + +M+    +P ++ +  ++  F + K +S A S    LE +G  PDL+ 
Sbjct: 37  IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLIT 96

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLV 383
            N+LI+C   MG       V   +L+    PD+ T  +L+  +CL G+         KL+
Sbjct: 97  LNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLL 156

Query: 384 C-GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
             G ++    V Y  L++  CK G    A+KL                          RK
Sbjct: 157 AQGFQLNQ--VSYATLINGVCKIGDTRGAIKLL-------------------------RK 189

Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTV 502
           ID          +  P  N  +++ I+D L +     +A  LF    V+    DVV+Y+ 
Sbjct: 190 IDGR--------LTKP--NVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYST 239

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
            I G    G+ +EA  L ++M    + PN YTY +++ + CKE  +K  K +L  ++ A 
Sbjct: 240 LIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKAC 299

Query: 563 IELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           ++ D  T   L    F  +    A +    M  +G+ PD
Sbjct: 300 VKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPD 338


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 121/508 (23%), Positives = 219/508 (43%), Gaps = 21/508 (4%)

Query: 71  IWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYW 130
           +W   + D    +Q+ + ++  + +  GRF+T+  + G++   G      T+   +    
Sbjct: 146 LWVYYKMDVLPAMQACNMVLDGLVK-KGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCC 204

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFL 186
           R   +      FDEM      P      I++  L    R+     + +  +    LPN  
Sbjct: 205 RQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLY 264

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           ++N  +   CK+  V    ++   M+  G  PNV  F IL++  CK   +  A + L  M
Sbjct: 265 TYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDM 324

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
            + G   ++  +  LIDG+ +   L  A  L  ++ ++   P+V TY+ LIKG       
Sbjct: 325 ASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRM 384

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
             A   L  ++ +G  P+ V +N LID   K G+ + A++V   + E  + P+  TF +L
Sbjct: 385 EEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTL 444

Query: 367 LSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           +   C +G+      L   + ++    D+V Y AL+    K G   +A +L+  M + G 
Sbjct: 445 IDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGL 504

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVY---QGIVMNNPAVNA---------HV-HTAIVD 470
            P+ ++   L+ GLC   +I +AI ++    G        N          HV +TA++ 
Sbjct: 505 HPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQ 564

Query: 471 RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
            L   GR  KA + F          DV +  V I+G        +  +L + +  + + P
Sbjct: 565 GLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIP 624

Query: 531 NAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           N+  YRV+   + +   +K   R  +D+
Sbjct: 625 NSSVYRVLAKGYEESGYLKSALRCSEDL 652



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 138/588 (23%), Positives = 256/588 (43%), Gaps = 90/588 (15%)

Query: 57  LLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGEL------ 110
           +L C +   AL  F   +++ D   + Q +  +I V+T     +   R ++ +L      
Sbjct: 44  ILTCRTANQALELFHSVSRRADLAKNPQLYSAIIHVLTG-AKLYAKARCLMRDLIQCLQN 102

Query: 111 ---ARVGCVIKAQTFLLFLRI---YWRGEMYGMVLEAFDEMG----------RFGFTPNT 154
              +R+ C +    F +  R+    +   ++G+++ AF EMG          +    P  
Sbjct: 103 SRRSRICCSV----FNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVLPAM 158

Query: 155 FARNIVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGM 210
            A N+V+D L K GR D   KV    +     PN +++   +   C+  D      +   
Sbjct: 159 QACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDE 218

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M+ K  +P V ++ IL+   C   RI+EA  +   M   G   ++  +  ++DG+ ++  
Sbjct: 219 MIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAH 278

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           +  A  L+++M+ +G  PNVVT+  LI G  +      A  FL  + S G  P++  +N 
Sbjct: 279 VKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNC 338

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA 390
           LID   K G+  +AL ++  + + +++PD +T+  L+  +C   R      L+  ++ + 
Sbjct: 339 LIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKG 398

Query: 391 ---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
              + V YN L+  +CK G   +A+++ + M +KG  P+  +F  L+ G C A K++ A+
Sbjct: 399 FLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAM 458

Query: 448 NVYQGIVMNN--PAVNAHVH---------------------------------TAIVDRL 472
            +Y  +V+    P V A+                                   + ++D L
Sbjct: 459 GLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGL 518

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDV-----------------VSYTVAIRGLLEGGRTEE 515
            + GR   AI+LF    + K   D                  V YT  I+GL   GR  +
Sbjct: 519 CKDGRISDAIKLF----LAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFK 574

Query: 516 AYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           A   +S M+   + P+ +T  V++    +  +++ V  L  D++   I
Sbjct: 575 ASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGI 622



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 174/355 (49%), Gaps = 3/355 (0%)

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
           P ++   ++L+   K GR    +++ G M+  G S +V  +  LIDG  R      A  L
Sbjct: 156 PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRL 215

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
           +++M++    P VV YT LI+G       S A S    + + G  P+L  +N ++D   K
Sbjct: 216 FDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCK 275

Query: 338 MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVV 394
           +     AL++Y  +L   L+P+  TF  L+  +C +       K +  +    V  ++ V
Sbjct: 276 IAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFV 335

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           YN L+  +CKAG  ++A+ L++ +      PD +++  L++GLCG  +++EA  + Q + 
Sbjct: 336 YNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMK 395

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
                 NA  +  ++D   + G   KAI++  +   +    ++++++  I G  + G+ E
Sbjct: 396 KKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKME 455

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
            A  LY++M    + P+   Y  ++    K+ N K   RL +++ +A +  +  T
Sbjct: 456 AAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFT 510



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/359 (25%), Positives = 167/359 (46%), Gaps = 16/359 (4%)

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
           +  + N + VLI  F  +  ++ A +++ KM      P +     ++ G ++   F   +
Sbjct: 122 SKFTPNVFGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLVKKGRFDTMW 178

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
                + + G +P++V +  LID   + G +  A  ++D ++E K+ P    +  L+  +
Sbjct: 179 KVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGL 238

Query: 371 CLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           C   R S    +   +       +L  YN ++  +CK     +A++LY  ML  G  P+ 
Sbjct: 239 CGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNV 298

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIV-MNNPAV--NAHVHTAIVDRLIEAGRCHKAIQL 484
            +F  L+ GLC   K DE ++  + ++ M +  V  N  V+  ++D   +AG   +A+ L
Sbjct: 299 VTFGILIDGLC---KTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSL 355

Query: 485 FRRAIVEKYPL--DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
                +EK+ +  DV +Y++ I+GL    R EEA  L  +MK     PNA TY  ++  +
Sbjct: 356 HSE--IEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGY 413

Query: 543 CKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           CKE N++    +   + +  IE +  T   L     K     +A+    EM   GL+PD
Sbjct: 414 CKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPD 472



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 132/295 (44%), Gaps = 8/295 (2%)

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
           F+ L  LES    P++    VLI   S+MG  ++AL VY    ++ ++P       +L  
Sbjct: 113 FNVLSRLESSKFTPNVF--GVLIIAFSEMGLVEEALWVY---YKMDVLPAMQACNMVLDG 167

Query: 370 VCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
           +   GRF  + K+   +       ++V Y  L+   C+ G   +A +L++ M++K   P 
Sbjct: 168 LVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPT 227

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
              +  L+RGLCG  +I EA ++++ +  +    N + +  ++D   +     KA++L++
Sbjct: 228 VVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQ 287

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
             + +    +VV++ + I GL +      A      M    V PN + Y  ++  +CK  
Sbjct: 288 EMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAG 347

Query: 547 NIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           N+     L  ++    I  D  T   L K +        A   L EM   G +P+
Sbjct: 348 NLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPN 402


>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 94/383 (24%), Positives = 186/383 (48%), Gaps = 7/383 (1%)

Query: 178 KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIA 237
           +E+  PN ++++I +  LC+   +     +   MV KG  P+ R + +L+   C +G   
Sbjct: 192 EESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTD 251

Query: 238 EAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLI 297
           +A ++L  M T     +V+ +T+LID   R  +++ A  ++ KM+++G  P ++T+ +LI
Sbjct: 252 KAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALI 311

Query: 298 KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
            G+ +      AF  L ++E     P++  +N L++ L ++     A  +   +++  L+
Sbjct: 312 NGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLL 371

Query: 358 PDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKL 414
           PD  T+  L+   C  G+ ++   +   +    +E D   + AL+   CK G   QA  +
Sbjct: 372 PDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGI 431

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
             +M+ KG + D  +F  L+ G C   K  +   +++ +V N     AH     +D L +
Sbjct: 432 LGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGK 491

Query: 475 AGRCHKAIQLFRRAIVEKYPL--DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
             + ++A  +  + +  KY L   VV++T+ I G    G T  +  +  +MK     PN 
Sbjct: 492 DYKLNEANAMLGKMM--KYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNV 549

Query: 533 YTYRVMLLSFCKERNIKMVKRLL 555
           YTY +++   C    ++  + +L
Sbjct: 550 YTYTIIINGLCNNGRVEEAETIL 572



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 110/434 (25%), Positives = 187/434 (43%), Gaps = 45/434 (10%)

Query: 136 GMVLEAFD---EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSF 188
           G + EAF    EM   G  P+T    +++     IG  D  +K+L E      +PN  ++
Sbjct: 213 GRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTY 272

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
            I +  LC+   +     V   M++ G  P +  F  L+N +CK G +  A+QLL +M  
Sbjct: 273 TILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEK 332

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
                ++  +  L++G  R+ +   A  L  ++V NG  P+ VTY  L+ GF +    ++
Sbjct: 333 GNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNM 392

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           AF+  + + S G  PD      LID L K+G  + A  +   +++  +  D  TF     
Sbjct: 393 AFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTF----- 447

Query: 369 TVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
                                       AL+   CK G       L+  M++       +
Sbjct: 448 ---------------------------TALIDGHCKIGKAKDVCFLFENMVENRCLTTAH 480

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV-HTAIVDRLIEAGRCHKAIQLFRR 487
           +F   L  L    K++EA N   G +M    V + V HT +++    AG    ++++  R
Sbjct: 481 TFNCFLDALGKDYKLNEA-NAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLER 539

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK--- 544
                   +V +YT+ I GL   GR EEA  +   M    V PN +TY V++ +  K   
Sbjct: 540 MKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGR 599

Query: 545 -ERNIKMVKRLLQD 557
            +R  ++V  ++++
Sbjct: 600 LDRAFQIVSTMVKN 613



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 116/506 (22%), Positives = 213/506 (42%), Gaps = 48/506 (9%)

Query: 48  LAPHIVHSTLL-NCPSDLIALSFFIW--CAKQRDYFHDVQSFDHMISVVTRLTGRFETVR 104
           L  H+  S +L NC  D +  +F ++   +K+     +  ++  +I  +    GR E   
Sbjct: 161 LDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCE-AGRLEEAF 219

Query: 105 GIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVL 164
            +  E+   GC    +T+ + ++      M    ++  DEM      PN     I++D L
Sbjct: 220 QLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRL 279

Query: 165 FKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFE 224
            + G+++    V ++                               M++ G  P +  F 
Sbjct: 280 CREGKIEEANGVFRK-------------------------------MLKHGLCPGIITFN 308

Query: 225 ILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN 284
            L+N +CK G +  A+QLL +M       ++  +  L++G  R+ +   A  L  ++V N
Sbjct: 309 ALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDN 368

Query: 285 GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
           G  P+ VTY  L+ GF +    ++AF+  + + S G  PD      LID L K+G  + A
Sbjct: 369 GLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQA 428

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLV----VYNA 397
             +   +++  +  D  TF +L+   C  G+     K VC L    VE   +     +N 
Sbjct: 429 NGILGSMVKKGISLDEVTFTALIDGHCKIGK----AKDVCFLFENMVENRCLTTAHTFNC 484

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
            L    K    N+A  +   M+  G  P   +   L+ G C A +   ++ + + +    
Sbjct: 485 FLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAG 544

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQ-LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
            + N + +T I++ L   GR  +A   LF  +     P +  +Y V ++  ++ GR + A
Sbjct: 545 CSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSP-NHFTYAVLVKAHVKAGRLDRA 603

Query: 517 YILYSQMKHIAVPPNAYTYRVMLLSF 542
           + + S M      PN++ Y  +L  F
Sbjct: 604 FQIVSTMVKNGCQPNSHIYSALLSGF 629



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/399 (24%), Positives = 171/399 (42%), Gaps = 14/399 (3%)

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           MV +GF      +  ++N  CK G +  A      ++ LG  L  +  T L+    R   
Sbjct: 119 MVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDD 178

Query: 271 LDMAGYLWEKMV-QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHN 329
           L  A  ++EKM  +  C PN VTY+ LI G  EA     AF     +  +G  P    + 
Sbjct: 179 LGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYT 238

Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS--------LLPK 381
           VLI     +G  D A+ + D +     VP+ +T+  L+  +C  G+          +L  
Sbjct: 239 VLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKH 298

Query: 382 LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
            +C       ++ +NAL++ +CK G+   A +L + M      P+  ++  L+ GLC   
Sbjct: 299 GLC-----PGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVS 353

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYT 501
           K  +A  + + +V N    +   +  +VD   + G+ + A  +F          D  ++T
Sbjct: 354 KSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFT 413

Query: 502 VAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
             I GL + GR E+A  +   M    +  +  T+  ++   CK    K V  L +++++ 
Sbjct: 414 ALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVEN 473

Query: 562 RIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           R     HT       + K +  + A   L +M   GL+P
Sbjct: 474 RCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVP 512



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 106/420 (25%), Positives = 184/420 (43%), Gaps = 16/420 (3%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD-----LGIK 175
           T+ + +  + +     M    F+ M   G  P+ F    ++D L K+GR++     LG  
Sbjct: 376 TYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSM 435

Query: 176 VLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGR 235
           V K   L   ++F   +   CK+    +V  +   MV          F   L+   K  +
Sbjct: 436 VKKGISLDE-VTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYK 494

Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
           + EA  +LG M+  G   SV   T+LI+G  R     ++  + E+M Q GCSPNV TYT 
Sbjct: 495 LNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTI 554

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           +I G         A + L  + S G +P+   + VL+    K G  D A  +   +++  
Sbjct: 555 IINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNG 614

Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVY-----NALLSYFCKAGFPNQ 410
             P+S+ + +LLS   LS        L    +++A  +       N L S+  +    + 
Sbjct: 615 CQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDH 674

Query: 411 AVKLYNTMLDKGF-TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
           A+K+ + +   G  T D Y+F  L+ GLC   +I EA  + Q +V +    +  + ++I+
Sbjct: 675 ALKIRDEIKKCGVPTEDLYNF--LVVGLCKEGRIIEADQLTQDMVKHGLFPDKAI-SSII 731

Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM-KHIAV 528
           +   +  +    ++  +  +  K+     SY   I GL   GR +EA  L S + +H  +
Sbjct: 732 EHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGI 791



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 94/388 (24%), Positives = 176/388 (45%), Gaps = 30/388 (7%)

Query: 85  SFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDE 144
           +F  +I  + +L GR E   GI+G + + G  +   TF   +  + +      V   F+ 
Sbjct: 411 TFTALIDGLCKL-GRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFEN 469

Query: 145 M--GRFGFTPNTFARNIVMDVLFKIGRVD-----LGIKVLKETQLPNFLSFNIALCNLCK 197
           M   R   T +TF  N  +D L K  +++     LG K++K   +P+ ++  I +   C+
Sbjct: 470 MVENRCLTTAHTF--NCFLDALGKDYKLNEANAMLG-KMMKYGLVPSVVTHTILIEGHCR 526

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
             + +    ++  M + G  PNV  + I++N  C  GR+ EA  +L  M + G S +   
Sbjct: 527 AGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFT 586

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM--EAKMFSIAFSFLDM 315
           + VL+    +  RLD A  +   MV+NGC PN   Y++L+ GF+     + + A S    
Sbjct: 587 YAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGD 646

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL-VPDSYTFCSLLSTVCLSG 374
           L++   + +   +N L   + ++   D AL + D + +  +   D Y F  L+  +C  G
Sbjct: 647 LDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDLYNF--LVVGLCKEG 704

Query: 375 RFSLLPKLVCGLEVEADLVVY--------NALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
           R     +L        D+V +        ++++ ++CK    +  ++    +LD  F P 
Sbjct: 705 RIIEADQLT------QDMVKHGLFPDKAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPS 758

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIV 454
             S+  ++ GL    ++ EA  +   +V
Sbjct: 759 FASYCWVIHGLRNEGRVQEAQKLVSDLV 786



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 73/313 (23%), Positives = 130/313 (41%), Gaps = 4/313 (1%)

Query: 293 YTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
           Y++L+    +  M  +AF     + +EG     + +  +++ L K G    A      +L
Sbjct: 96  YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 155

Query: 353 ELKLVPDSYTFCSLLSTVC----LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFP 408
            L    D++   SL+   C    L   F +  K+        + V Y+ L+   C+AG  
Sbjct: 156 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRL 215

Query: 409 NQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAI 468
            +A +L   M++KG  P   ++  L++  C     D+A+ +   +       N H +T +
Sbjct: 216 EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTIL 275

Query: 469 VDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAV 528
           +DRL   G+  +A  +FR+ +       ++++   I G  + G    A+ L S M+    
Sbjct: 276 IDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNC 335

Query: 529 PPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVN 588
            PN  TY  ++   C+         LL+ V+D  +  D  T   L     K    + A N
Sbjct: 336 KPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFN 395

Query: 589 QLVEMCNLGLIPD 601
               M + GL PD
Sbjct: 396 IFNSMNSAGLEPD 408



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/280 (20%), Positives = 124/280 (44%), Gaps = 4/280 (1%)

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCG-- 385
           ++ L+ CL+K+     A  VY  ++    V     + ++++ +C +G         C   
Sbjct: 96  YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 155

Query: 386 -LEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM-LDKGFTPDNYSFVGLLRGLCGARKI 443
            L    D  V  +L+   C+     +A +++  M  ++   P++ ++  L+ GLC A ++
Sbjct: 156 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRL 215

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           +EA  + Q +V      +   +T ++    + G   KA+++      +    +V +YT+ 
Sbjct: 216 EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTIL 275

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           I  L   G+ EEA  ++ +M    + P   T+  ++  +CKE  +    +LL  +     
Sbjct: 276 IDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNC 335

Query: 564 ELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           + +  T   L + + +   S  A   L  + + GL+PD +
Sbjct: 336 KPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRV 375


>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 584

 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 110/454 (24%), Positives = 208/454 (45%), Gaps = 10/454 (2%)

Query: 118 KAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL 177
           K++ + + +  Y + +     +  F+EM   GF P +   N ++  +      +      
Sbjct: 93  KSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFF 152

Query: 178 KETQLP---NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
            E+++    +  SF I +   C+  ++    D++  +   GF PNV ++  L++  CK G
Sbjct: 153 NESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKG 212

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWT--VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVT 292
            I +A  L   M   G  L  N WT  VLI G  +         ++EKM ++G  PN+ T
Sbjct: 213 EIEKAKDLFFEMGKFG--LVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHT 270

Query: 293 YTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
           Y  ++    +      AF   D +   G + ++V +N LI  L +    ++A +V D + 
Sbjct: 271 YNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMK 330

Query: 353 ELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPN 409
              + P+  T+ +L+   C   +      L   L+   +   LV YN L+S FCK G  +
Sbjct: 331 SDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTS 390

Query: 410 QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
            A K+   M ++G  P   ++  L+     +  +++AI +   +       + H ++ ++
Sbjct: 391 GAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLI 450

Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
                 GR ++A +LF+  + +K+  + V Y   + G  + G +  A  L+ +M+   +P
Sbjct: 451 HGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELP 510

Query: 530 PNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           PN  +YR M+   CKER  K  + L++ +ID+ I
Sbjct: 511 PNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGI 544



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 97/403 (24%), Positives = 182/403 (45%), Gaps = 39/403 (9%)

Query: 136 GMVLEAFD---EMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSF 188
           G + ++FD   E+  FGF+PN      ++D   K G +    DL  ++ K   + N  ++
Sbjct: 177 GEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTY 236

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
            + +  L K        ++   M   G +PN+  +  ++N  CK GR  +A+++   M  
Sbjct: 237 TVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRE 296

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
            G S ++  +  LI G  R  + + A  + ++M  +G +PN++TY +LI GF   +    
Sbjct: 297 RGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGK 356

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A S    L+S G +P LV +N+L+    K G    A  V   + E  + P          
Sbjct: 357 ALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSK-------- 408

Query: 369 TVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
                                   V Y  L+  F ++    +A++L ++M + G TPD +
Sbjct: 409 ------------------------VTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVH 444

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
           ++  L+ G C   +++EA  +++ +V      N  ++  +V    + G  ++A++LFR  
Sbjct: 445 TYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREM 504

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
             ++ P +V SY   I  L +  +++EA  L  +M    + P+
Sbjct: 505 EEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPS 547



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/361 (23%), Positives = 156/361 (43%), Gaps = 36/361 (9%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G  E  + +  E+ + G V    T+ + +   ++  +     E +++M   G  PN    
Sbjct: 212 GEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTY 271

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQLP----NFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N VM+ L K GR     KV  E +      N +++N  +  LC+    +   +V+  M  
Sbjct: 272 NCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKS 331

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G  PN+  +  L++ FC + ++ +A  L   + + G S S+  + +L+ GF +      
Sbjct: 332 DGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSG 391

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           AG + ++M + G  P+ VTYT LI  F  +     A      +E  G  PD+  ++VLI 
Sbjct: 392 AGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIH 451

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLV 393
                G  ++A  ++  ++E K  P+                                 V
Sbjct: 452 GFCIKGRMNEASRLFKSMVEKKFEPNE--------------------------------V 479

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
           +YN ++  +CK G   +A++L+  M +K   P+  S+  ++  LC  RK  EA  + + +
Sbjct: 480 IYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKM 539

Query: 454 V 454
           +
Sbjct: 540 I 540



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 77/382 (20%), Positives = 149/382 (39%), Gaps = 74/382 (19%)

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSP----------------------------- 288
           + V+I+ + + + LD + Y + +MV  G  P                             
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156

Query: 289 -----NVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
                +V ++  +IKG  EA     +F  L  L   G +P++V +  LID   K G  + 
Sbjct: 157 IKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEK 216

Query: 344 ALDVYDGLLELKLVPDSYTFCSLLSTVCLSG----RFSLLPKLVCGLEVEADLVVYNALL 399
           A D++  + +  LV + +T+  L+  +  +G     F +  K+     V  +L  YN ++
Sbjct: 217 AKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQ-EHGVFPNLHTYNCVM 275

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
           +  CK G    A K+++ M ++G + +  ++  L+ GLC   K +EA  V   +  +   
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGIN 335

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            N   +  ++D      +  KA+ L R                                 
Sbjct: 336 PNLITYNTLIDGFCGVRKLGKALSLCR--------------------------------- 362

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK 579
              +K   + P+  TY +++  FCK+ +     ++++++ +  I+    T   L     +
Sbjct: 363 --DLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFAR 420

Query: 580 FHSSSSAVNQLVEMCNLGLIPD 601
             +   A+     M  LGL PD
Sbjct: 421 SDNMEKAIQLRSSMEELGLTPD 442



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 72/345 (20%), Positives = 138/345 (40%), Gaps = 37/345 (10%)

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           +I G ++++ F+ +     + ESE        + V+I+   +  S D ++  ++ +++  
Sbjct: 65  VISGKIQSQFFTSSSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKG 124

Query: 356 LVPDSYTFCSLLSTVCLSGRFS---------------------LLPKLVC-GLEVEA--- 390
            VP S  F +LL+ V  S  F+                     ++ K  C   E+E    
Sbjct: 125 FVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFD 184

Query: 391 ------------DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
                       ++V+Y  L+   CK G   +A  L+  M   G   + +++  L+ GL 
Sbjct: 185 LLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLF 244

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
                 +   +Y+ +  +    N H +  ++++L + GR   A ++F          ++V
Sbjct: 245 KNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIV 304

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           +Y   I GL    +  EA  +  QMK   + PN  TY  ++  FC  R +     L +D+
Sbjct: 305 TYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDL 364

Query: 559 IDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
               +     T   L     K   +S A   + EM   G+ P ++
Sbjct: 365 KSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKV 409


>gi|357115308|ref|XP_003559432.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
           mitochondrial-like [Brachypodium distachyon]
          Length = 570

 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 97/408 (23%), Positives = 180/408 (44%), Gaps = 8/408 (1%)

Query: 30  QISSPKVCATTHQDFPIILAPHIVHSTLLNCPSDLIA-LSFFIWCAKQRDYFHDVQSFDH 88
             +SP+         P+ ++  +V   L    SD +A   FF+W   Q  Y H    ++ 
Sbjct: 106 HFASPEAIVIAMDCCPVRVSGRMVDKILRRFGSDWVAAFGFFMWAGAQEGYCHHADLYNL 165

Query: 89  MISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRF 148
           M+ ++ +   +F+ + G++ ++  +GC++   T    +R       +   ++AF++M +F
Sbjct: 166 MVDILGKFK-QFDLLWGLIRQMDEIGCLVSLATMTKVMRRLAGANRWTDAIDAFNKMDQF 224

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ---LPNFLSFNIALCNLCKLNDVSNVK 205
           G   +T A N ++D L K   V     V +E +    P+  SFN  +   C+   ++  +
Sbjct: 225 GVVRDTKAMNALLDTLCKEKSVKRARGVFQELRGVVPPDESSFNTLVHGWCQARMLNEAR 284

Query: 206 DVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF 265
           D +  M   GF P+V  +  L+  +C        Y +L  M + G   +V  +T+++   
Sbjct: 285 DTMKEMEEHGFSPSVITYTSLIEAYCMEKDFQTVYAILNEMCSKGCRPNVITYTIVMHAL 344

Query: 266 RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL 325
            +  R   A  +++K+ ++GC P+   Y S+I     A     A S  D +   G  P +
Sbjct: 345 GKAGRTQEALDVFDKVKRDGCVPDASFYNSIIYILGRAGRLEDANSVFDEMCRTGIPPTV 404

Query: 326 VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCG 385
              N +I         ++AL +   + E    PD  T+  LL   C      +LP L+C 
Sbjct: 405 AIFNTMISAACDHSQAENALKILVKMEEQSCKPDIKTYTPLLKLCCKRQWMKILPFLICH 464

Query: 386 L---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           +   ++  D   Y  L+++ C+ G P Q+      M+ KGF P   +F
Sbjct: 465 MFRKDISPDFSTYILLVTWLCRNGKPAQSCLFLEEMVLKGFMPKQETF 512



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/348 (20%), Positives = 148/348 (42%), Gaps = 4/348 (1%)

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           + +++D   + ++ D+   L  +M + GC  ++ T T +++    A  ++ A    + ++
Sbjct: 163 YNLMVDILGKFKQFDLLWGLIRQMDEIGCLVSLATMTKVMRRLAGANRWTDAIDAFNKMD 222

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G   D    N L+D L K  S   A  V+  L  + + PD  +F +L+   C +   +
Sbjct: 223 QFGVVRDTKAMNALLDTLCKEKSVKRARGVFQELRGV-VPPDESSFNTLVHGWCQARMLN 281

Query: 378 LLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
                +  +E       ++ Y +L+  +C          + N M  KG  P+  ++  ++
Sbjct: 282 EARDTMKEMEEHGFSPSVITYTSLIEAYCMEKDFQTVYAILNEMCSKGCRPNVITYTIVM 341

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
             L  A +  EA++V+  +  +    +A  + +I+  L  AGR   A  +F        P
Sbjct: 342 HALGKAGRTQEALDVFDKVKRDGCVPDASFYNSIIYILGRAGRLEDANSVFDEMCRTGIP 401

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
             V  +   I    +  + E A  +  +M+  +  P+  TY  +L   CK + +K++  L
Sbjct: 402 PTVAIFNTMISAACDHSQAENALKILVKMEEQSCKPDIKTYTPLLKLCCKRQWMKILPFL 461

Query: 555 LQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
           +  +    I  D+ T I L  ++ +    + +   L EM   G +P +
Sbjct: 462 ICHMFRKDISPDFSTYILLVTWLCRNGKPAQSCLFLEEMVLKGFMPKQ 509


>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
          Length = 871

 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 118/435 (27%), Positives = 205/435 (47%), Gaps = 29/435 (6%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+ L+FN  +C  C+ + V   + ++ +M +    P+V  F IL+N  C  GR   A   
Sbjct: 245 PSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRTWVAIDW 304

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           L LM+  G   SV  +T ++    R   +  A  L++ +   G +PN   Y +L+ G+ +
Sbjct: 305 LHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFK 364

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
           A+  + A    + + + G +PD V  N+L+    K G  +D+  +   L+   L  DS  
Sbjct: 365 AREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSL 424

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
           +  ++S++C +GR     KL+  L    +   +V +N+L+  + +AG  ++A + Y  M+
Sbjct: 425 YDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMV 484

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEA-INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
             GFTP + +   LL GLC    + EA I +Y+ +    P +N   +T ++D   +    
Sbjct: 485 RCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFP-INKVAYTVLLDGYFKMNNL 543

Query: 479 HKAIQLFRRAIVEK--YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
             A Q   + + E+  YP D V++T  I GL + G  EEAY ++ +M  I   PN + Y 
Sbjct: 544 EGA-QFLWKEMKERGIYP-DAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYN 601

Query: 537 VMLLSFCK----------ERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSA 586
            ++   C           E+ ++  K LL D     I +D        KF         A
Sbjct: 602 SLIRGLCDCGRVTEALKLEKEMRQ-KGLLSDTFTFNIIIDGFCRRGQMKF---------A 651

Query: 587 VNQLVEMCNLGLIPD 601
           +   ++M  +GL+PD
Sbjct: 652 IETFLDMQRIGLLPD 666



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 118/510 (23%), Positives = 204/510 (40%), Gaps = 79/510 (15%)

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNI 190
           YG V + F +M   G  P+    N ++    +  RV +G  +L    K    P+ ++FNI
Sbjct: 228 YGSVWKLFKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNI 287

Query: 191 ALCNLCKLNDVSNVK-DVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
            L N C +   + V  D + +MVR G  P+V  F  +L+  C+ G + EA +L   +  +
Sbjct: 288 -LINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDM 346

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG---------- 299
           G + +   +  L+DG+ + R +  A  L+E+M   G SP+ VT+  L+ G          
Sbjct: 347 GIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDS 406

Query: 300 ------------FMEAKMFSI-------------AFSFLDMLESEGHAPDLVFHNVLIDC 334
                       F+++ ++ +             A   L  L  +G    +V  N LI  
Sbjct: 407 DRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGA 466

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG-----RFSLLPKLVCGLEVE 389
            S+ G  D A + Y  ++     P S T  SLL  +C  G     R  L   L  G  + 
Sbjct: 467 YSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPIN 526

Query: 390 ---------------------------------ADLVVYNALLSYFCKAGFPNQAVKLYN 416
                                             D V + AL+    KAG   +A +++ 
Sbjct: 527 KVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFL 586

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
            M   GF P+N+++  L+RGLC   ++ EA+ + + +       +      I+D     G
Sbjct: 587 EMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRG 646

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
           +   AI+ F          D+ ++ + I G  +      A  + ++M    + P+  TY 
Sbjct: 647 QMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYN 706

Query: 537 VMLLSFCKERNIKMVKRLLQDVIDARIELD 566
             +  +C+ R +     +L  +I A I  D
Sbjct: 707 TYMHGYCRMRKMNQAVIILDQLISAGIVPD 736



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/408 (23%), Positives = 193/408 (47%), Gaps = 19/408 (4%)

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKD----VIGMMVR 213
           ++++  L   GR+D  +K+L+E          +A  +L      + ++D       +MVR
Sbjct: 426 DVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVR 485

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            GF P+      LL   C+ G + EA  LL  M+  G  ++  A+TVL+DG+ ++  L+ 
Sbjct: 486 CGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEG 545

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A +LW++M + G  P+ V +T+LI G  +A     A+     + + G  P+   +N LI 
Sbjct: 546 AQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIR 605

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEA 390
            L   G   +AL +   + +  L+ D++TF  ++   C  G+     +    ++   +  
Sbjct: 606 GLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLP 665

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           D+  +N L+  +CKA     A ++ N M   G  PD  ++   + G C  RK+++A+ + 
Sbjct: 666 DIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIIL 725

Query: 451 Q-----GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
                 GIV +    N  +     D L       +A+ L  + +   +  +V++  + + 
Sbjct: 726 DQLISAGIVPDTVTYNTMLSGICSDIL------DRAMILTAKLLKMGFIPNVITTNMLLS 779

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC-KERNIKMVK 552
              + G  E+A I   +++ I+   +  +YR++  ++C  + ++++V+
Sbjct: 780 HFCKQGMPEKALIWGQKLREISFGFDEISYRILDQAYCLMQDDVELVR 827



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 96/400 (24%), Positives = 167/400 (41%), Gaps = 42/400 (10%)

Query: 80  FHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVL 139
           F D   +D M+S +    GR +    ++ EL   G  +    F   +  Y R  +     
Sbjct: 419 FLDSSLYDVMVSSLC-WAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAF 477

Query: 140 EAFDEMGRFGFTP-----------------------------------NTFARNIVMDVL 164
           EA+  M R GFTP                                   N  A  +++D  
Sbjct: 478 EAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGY 537

Query: 165 FKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV 220
           FK+  ++    + KE +     P+ ++F   +  L K  +V    +V   M   GF PN 
Sbjct: 538 FKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNN 597

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
             +  L+   C  GR+ EA +L   M   G       + ++IDGF R  ++  A   +  
Sbjct: 598 FAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLD 657

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           M + G  P++ T+  LI G+ +A     A   ++ + S G  PD+  +N  +    +M  
Sbjct: 658 MQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRK 717

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVC--LSGRFSLLPKLVCGLEVEADLVVYNAL 398
            + A+ + D L+   +VPD+ T+ ++LS +C  +  R  +L   +  +    +++  N L
Sbjct: 718 MNQAVIILDQLISAGIVPDTVTYNTMLSGICSDILDRAMILTAKLLKMGFIPNVITTNML 777

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
           LS+FCK G P +A+     + +  F  D  S+  L +  C
Sbjct: 778 LSHFCKQGMPEKALIWGQKLREISFGFDEISYRILDQAYC 817



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 87/379 (22%), Positives = 174/379 (45%), Gaps = 3/379 (0%)

Query: 226 LLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
           LL  F  +G   EA ++L +M  +G    +++ T+L+    R+        L++ M+  G
Sbjct: 183 LLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLFKDMIFKG 242

Query: 286 CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL 345
             P+ +T+ ++I GF       +  S L ++     +PD+V  N+LI+     G    A+
Sbjct: 243 PRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRTWVAI 302

Query: 346 DVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYF 402
           D    ++   + P   TF ++L  +C  G      KL  G++   +  +  +YN L+  +
Sbjct: 303 DWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGY 362

Query: 403 CKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNA 462
            KA    QA  LY  M   G +PD  +F  L+ G     +I+++  + + ++++   +++
Sbjct: 363 FKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDS 422

Query: 463 HVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQ 522
            ++  +V  L  AGR  +A++L +  + +   L VV++   I      G  ++A+  Y  
Sbjct: 423 SLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRI 482

Query: 523 MKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHS 582
           M      P++ T   +L+  C++  ++  + LL  +++    ++      L    FK ++
Sbjct: 483 MVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNN 542

Query: 583 SSSAVNQLVEMCNLGLIPD 601
              A     EM   G+ PD
Sbjct: 543 LEGAQFLWKEMKERGIYPD 561



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 62/237 (26%), Positives = 108/237 (45%), Gaps = 5/237 (2%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLS----FNIALCNL 195
           E F EM   GF PN FA N ++  L   GRV   +K+ KE +    LS    FNI +   
Sbjct: 583 EVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGF 642

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
           C+   +    +    M R G  P++  F IL+  +CK   +  A +++  M + G    +
Sbjct: 643 CRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDI 702

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
             +   + G+ R+R+++ A  + ++++  G  P+ VTY +++ G   + +   A      
Sbjct: 703 TTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYNTMLSGIC-SDILDRAMILTAK 761

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
           L   G  P+++  N+L+    K G  + AL     L E+    D  ++  L    CL
Sbjct: 762 LLKMGFIPNVITTNMLLSHFCKQGMPEKALIWGQKLREISFGFDEISYRILDQAYCL 818


>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
 gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
          Length = 847

 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 122/515 (23%), Positives = 225/515 (43%), Gaps = 14/515 (2%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLR-IYWRGEMYGMVLEAFDEMGRFGFTPNT 154
           +TGR      ++  L   GC +K   +   +R +Y  G  Y      FDEM R    P+ 
Sbjct: 57  ITGRPHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYD-ARHLFDEMLRRDVFPDV 115

Query: 155 FARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGM 210
              N V+  L + G +     L  KVLK     N  + NI +  LC   +   +++ + +
Sbjct: 116 ATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLC---EGGRLEEAVAL 172

Query: 211 MVRKGFY--PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRL 268
           +     Y  P+V  +  L+   CK  ++ EA Q L  M+  G       +  +IDG+ + 
Sbjct: 173 VESMDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKR 232

Query: 269 RRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH 328
             L  A  L +  +  G  P+ VTY SLI G         A    +  +++   PDLV +
Sbjct: 233 DMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVY 292

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV 388
           N L+  L + G    AL V + ++E    PD +T+  +++ +C  G  S    ++    V
Sbjct: 293 NSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIV 352

Query: 389 EA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
           +    D+  +N ++  +CK    + A++L   M   G  PD  ++  +L GLC A K  E
Sbjct: 353 KGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKE 412

Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
               ++ +++     NA  +  +++   +  +  +A  +  R   +    D +S+   I 
Sbjct: 413 VNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIH 472

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
           G    G  + AY+L+ ++        A T+ +++ ++  + N++M +++  ++I    + 
Sbjct: 473 GFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKP 532

Query: 566 DYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           D +T   L     K  +   A   L EM + G +P
Sbjct: 533 DLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVP 567



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 100/474 (21%), Positives = 202/474 (42%), Gaps = 9/474 (1%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
           +RD F DV +F++++  + +  G       ++ ++ + G  +   T  +++R    G   
Sbjct: 108 RRDVFPDVATFNNVLHALCQ-KGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRL 166

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIA 191
              +   + M  +   P+    N +M  L K  +V    + L+       +P+  ++N  
Sbjct: 167 EEAVALVESMDAY-IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTI 225

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           +   CK + +    +++   + KGF P+   +  L+N  C  G +  A +L         
Sbjct: 226 IDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDL 285

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
              +  +  L+ G  R   +  A  +  +MV++GC P++ TY  +I G  +    S A  
Sbjct: 286 KPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAV 345

Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
            ++    +G+ PD+   N +ID   K    D AL + + +    + PD+ T+ S+L+ +C
Sbjct: 346 VMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLC 405

Query: 372 LSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
            +G+   + +    + ++    + + YN L+  FCK     +A  +   M   G  PD  
Sbjct: 406 KAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTI 465

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
           SF  L+ G C    +D A  ++Q +     +  A     ++           A ++F   
Sbjct: 466 SFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEM 525

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
           I + Y  D+ +Y V + G  +    + AY+  ++M      P+  T+  +L S 
Sbjct: 526 ISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSL 579



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/319 (23%), Positives = 140/319 (43%), Gaps = 7/319 (2%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALC 193
            LE F+E       P+    N ++  L + G +   ++V+ E       P+  ++NI + 
Sbjct: 273 ALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVIN 332

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
            LCK+ ++S+   V+   + KG+ P+V  F  +++ +CK  ++  A QL+  M   G + 
Sbjct: 333 GLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAP 392

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
               +  +++G  +  +       +E+M+  GC PN +TY  LI+ F +      A   +
Sbjct: 393 DAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVI 452

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
             +  +G  PD +  N LI    + G  D A  ++  L E      + TF  L+      
Sbjct: 453 VRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSK 512

Query: 374 GRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
               +  K+   +     + DL  Y  L+   CKA   ++A      M+ KGF P   +F
Sbjct: 513 LNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATF 572

Query: 431 VGLLRGLCGARKIDEAINV 449
             +L  L    ++ EA+ +
Sbjct: 573 GRVLNSLAMNHRVSEAVAI 591



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 78/391 (19%), Positives = 160/391 (40%), Gaps = 2/391 (0%)

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           G  P    +  +++         +A+++   M++ G +      TV I  F    R  +A
Sbjct: 5   GCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVA 64

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             L   + + GC    + Y ++++G         A    D +      PD+   N ++  
Sbjct: 65  LRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHA 124

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE--VEADL 392
           L + G   ++  +   +L+  +  + +T    +  +C  GR      LV  ++  +  D+
Sbjct: 125 LCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAYIAPDV 184

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           V YN L+   CK     +A +    M+++G  PD++++  ++ G C    + EA  + + 
Sbjct: 185 VTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKD 244

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
            +      +   + ++++ L   G   +A++LF  A  +    D+V Y   ++GL   G 
Sbjct: 245 AIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGL 304

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
              A  + ++M      P+ +TY +++   CK  NI     ++ D I      D  T   
Sbjct: 305 ILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNT 364

Query: 573 LTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           +     K     SA+  +  M   G+ PD +
Sbjct: 365 MIDGYCKRLKLDSALQLVERMWMYGIAPDAI 395



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 82/361 (22%), Positives = 153/361 (42%), Gaps = 8/361 (2%)

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           M   G   +  A+  ++D        D A  ++ +M+  G +P+  T+T  IK F     
Sbjct: 1   MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGR 60

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
             +A   L  L   G     + +  ++  L   G   DA  ++D +L   + PD  TF +
Sbjct: 61  PHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNN 120

Query: 366 LLSTVCLSGRF----SLLPKLVC-GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
           +L  +C  G      +LL K++  G+ V       N  +   C+ G   +AV L  +M D
Sbjct: 121 VLHALCQKGDIMESGALLAKVLKRGMSVNK--FTCNIWIRGLCEGGRLEEAVALVESM-D 177

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
               PD  ++  L+RGLC   K+ EA    + ++      +   +  I+D   +     +
Sbjct: 178 AYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQE 237

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
           A +L + AI + +  D V+Y   I GL   G  E A  L+++ +   + P+   Y  ++ 
Sbjct: 238 ATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVK 297

Query: 541 SFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
             C++  I    +++ ++++     D  T   +   + K  + S A   + +    G +P
Sbjct: 298 GLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLP 357

Query: 601 D 601
           D
Sbjct: 358 D 358


>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 106/421 (25%), Positives = 199/421 (47%), Gaps = 16/421 (3%)

Query: 147 RFGFTPNTFARNIVMDVLFKIGRVDLGI------KVLKETQL-PNFLSFNIALCNLCKLN 199
           R GF  +T     +  VL    R DLG       K+ KE    PN ++++I +  LC+  
Sbjct: 222 RLGFGLDTHVCTSL--VLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAG 279

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
            +     +   MV KG  P+ R + +L+   C +G   +A ++L  M T     +V+ +T
Sbjct: 280 RLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYT 339

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
           +LID   R  +++ A  ++ KM+++G  P ++T+ +LI G+ +      AF  L ++E  
Sbjct: 340 ILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKG 399

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
              P++  +N L++ L ++     A  +   +++  L+PD  T+  L+   C  G+ ++ 
Sbjct: 400 NCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMA 459

Query: 380 PKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
             +   +    +E D   + AL+   CK G   QA  +  +M+ KG + D  +F  L+ G
Sbjct: 460 FNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDG 519

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL- 495
            C   K  +   +++ +V N     AH     +D L +  + ++A  +  + +  KY L 
Sbjct: 520 HCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMM--KYGLV 577

Query: 496 -DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
             VV++T+ I G    G T  +  +  +MK     PN YTY +++   C    ++  + +
Sbjct: 578 PSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETI 637

Query: 555 L 555
           L
Sbjct: 638 L 638



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 110/434 (25%), Positives = 187/434 (43%), Gaps = 45/434 (10%)

Query: 136 GMVLEAFD---EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSF 188
           G + EAF    EM   G  P+T    +++     IG  D  +K+L E      +PN  ++
Sbjct: 279 GRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTY 338

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
            I +  LC+   +     V   M++ G  P +  F  L+N +CK G +  A+QLL +M  
Sbjct: 339 TILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEK 398

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
                ++  +  L++G  R+ +   A  L  ++V NG  P+ VTY  L+ GF +    ++
Sbjct: 399 GNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNM 458

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           AF+  + + S G  PD      LID L K+G  + A  +   +++  +  D  TF     
Sbjct: 459 AFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTF----- 513

Query: 369 TVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
                                       AL+   CK G       L+  M++       +
Sbjct: 514 ---------------------------TALIDGHCKIGKAKDVCFLFENMVENRCLTTAH 546

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV-HTAIVDRLIEAGRCHKAIQLFRR 487
           +F   L  L    K++EA N   G +M    V + V HT +++    AG    ++++  R
Sbjct: 547 TFNCFLDALGKDYKLNEA-NAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLER 605

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK--- 544
                   +V +YT+ I GL   GR EEA  +   M    V PN +TY V++ +  K   
Sbjct: 606 MKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGR 665

Query: 545 -ERNIKMVKRLLQD 557
            +R  ++V  ++++
Sbjct: 666 LDRAFQIVSTMVKN 679



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 118/544 (21%), Positives = 239/544 (43%), Gaps = 35/544 (6%)

Query: 48  LAPHIVHSTLL-NCPSDLIALSFFIW--CAKQRDYFHDVQSFDHMISVVTRLTGRFETVR 104
           L  H+  S +L NC  D +  +F ++   +K+ +   +  ++  +I  +    GR E   
Sbjct: 227 LDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCE-AGRLEEAF 285

Query: 105 GIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVL 164
            +  E+   GC    +T+ + ++      M    ++  DEM      PN     I++D L
Sbjct: 286 QLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRL 345

Query: 165 FKIGRVDL--GI--KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV 220
            + G+++   G+  K+LK    P  ++FN  +   CK   V +   ++ +M +    PN+
Sbjct: 346 CREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNI 405

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
           R +  L+   C++ +  +A+ LL  ++  G       + +L+DGF +  +L+MA  ++  
Sbjct: 406 RTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNS 465

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           M   G  P+  T+T+LI G  +      A   L  +  +G + D V    LID   K+G 
Sbjct: 466 MNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGK 525

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVC----LSGRFSLLPKLVCGLEVEADLVVYN 396
             D   +++ ++E + +  ++TF   L  +     L+   ++L K++    +   +V + 
Sbjct: 526 AKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMM-KYGLVPSVVTHT 584

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            L+   C+AG    ++K+   M   G +P+ Y++  ++ GLC   +++EA  +   +   
Sbjct: 585 ILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSF 644

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE-----GG 511
             + N   +  +V   ++AGR  +A Q+    +      +   Y+  + G +      G 
Sbjct: 645 GVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGA 704

Query: 512 RT----------------EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
           R                  +   L +++K   VP     Y  +++  CKE  I    +L 
Sbjct: 705 RALSSTGDLDARSLSSEENDNNCLSNEIKKCGVPTEDL-YNFLVVGLCKEGRIIEADQLT 763

Query: 556 QDVI 559
           QD++
Sbjct: 764 QDMV 767



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/399 (24%), Positives = 171/399 (42%), Gaps = 14/399 (3%)

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           MV +GF      +  ++N  CK G +  A      ++ LG  L  +  T L+    R   
Sbjct: 185 MVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDD 244

Query: 271 LDMAGYLWEKMV-QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHN 329
           L  A  ++EKM  +  C PN VTY+ LI G  EA     AF     +  +G  P    + 
Sbjct: 245 LGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYT 304

Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS--------LLPK 381
           VLI     +G  D A+ + D +     VP+ +T+  L+  +C  G+          +L  
Sbjct: 305 VLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKH 364

Query: 382 LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
            +C       ++ +NAL++ +CK G+   A +L + M      P+  ++  L+ GLC   
Sbjct: 365 GLC-----PGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVS 419

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYT 501
           K  +A  + + +V N    +   +  +VD   + G+ + A  +F          D  ++T
Sbjct: 420 KSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFT 479

Query: 502 VAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
             I GL + GR E+A  +   M    +  +  T+  ++   CK    K V  L +++++ 
Sbjct: 480 ALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVEN 539

Query: 562 RIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           R     HT       + K +  + A   L +M   GL+P
Sbjct: 540 RCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVP 578



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 105/419 (25%), Positives = 177/419 (42%), Gaps = 30/419 (7%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD-----LGIK 175
           T+ + +  + +     M    F+ M   G  P+ F    ++D L K+GR++     LG  
Sbjct: 442 TYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSM 501

Query: 176 VLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGR 235
           V K   L   ++F   +   CK+    +V  +   MV          F   L+   K  +
Sbjct: 502 VKKGISLDE-VTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYK 560

Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
           + EA  +LG M+  G   SV   T+LI+G  R     ++  + E+M Q GCSPNV TYT 
Sbjct: 561 LNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTI 620

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           +I G         A + L  + S G +P+   + VL+    K G  D A  +   +++  
Sbjct: 621 IINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNG 680

Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVY-----NALLSYFCKAGFPNQ 410
             P+S+ + +LLS   LS        L    +++A  +       N L +   K G P  
Sbjct: 681 CQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNEIKKCGVP-- 738

Query: 411 AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
                        T D Y+F  L+ GLC   +I EA  + Q +V +    +  + ++I++
Sbjct: 739 -------------TEDLYNF--LVVGLCKEGRIIEADQLTQDMVKHGLFPDKAI-SSIIE 782

Query: 471 RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM-KHIAV 528
              +  +    ++  +  +  K+     SY   I GL   GR +EA  L S + +H  +
Sbjct: 783 HYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGI 841



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 90/387 (23%), Positives = 171/387 (44%), Gaps = 44/387 (11%)

Query: 85  SFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDE 144
           +F  +I  + +L GR E   GI+G + + G  +   TF   +  + +      V   F+ 
Sbjct: 477 TFTALIDGLCKL-GRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFEN 535

Query: 145 M--GRFGFTPNTFARNIVMDVLFKIGRVD-----LGIKVLKETQLPNFLSFNIALCNLCK 197
           M   R   T +TF  N  +D L K  +++     LG K++K   +P+ ++  I +   C+
Sbjct: 536 MVENRCLTTAHTF--NCFLDALGKDYKLNEANAMLG-KMMKYGLVPSVVTHTILIEGHCR 592

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
             + +    ++  M + G  PNV  + I++N  C  GR+ EA  +L  M + G S +   
Sbjct: 593 AGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFT 652

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM--EAKMFSIAFSFLDM 315
           + VL+    +  RLD A  +   MV+NGC PN   Y++L+ GF+     + + A S    
Sbjct: 653 YAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGD 712

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
           L++   + +   +N L + + K G                 VP    +  L+  +C  GR
Sbjct: 713 LDARSLSSEENDNNCLSNEIKKCG-----------------VPTEDLYNFLVVGLCKEGR 755

Query: 376 FSLLPKLVCGLEVEADLVVY--------NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
                 ++   ++  D+V +        ++++ ++CK    +  ++    +LD  F P  
Sbjct: 756 ------IIEADQLTQDMVKHGLFPDKAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSF 809

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIV 454
            S+  ++ GL    ++ EA  +   +V
Sbjct: 810 ASYCWVIHGLRNEGRVQEAQKLVSDLV 836



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/313 (23%), Positives = 130/313 (41%), Gaps = 4/313 (1%)

Query: 293 YTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
           Y++L+    +  M  +AF     + +EG     + +  +++ L K G    A      +L
Sbjct: 162 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 221

Query: 353 ELKLVPDSYTFCSLLSTVC----LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFP 408
            L    D++   SL+   C    L   F +  K+        + V Y+ L+   C+AG  
Sbjct: 222 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRL 281

Query: 409 NQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAI 468
            +A +L   M++KG  P   ++  L++  C     D+A+ +   +       N H +T +
Sbjct: 282 EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTIL 341

Query: 469 VDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAV 528
           +DRL   G+  +A  +FR+ +       ++++   I G  + G    A+ L S M+    
Sbjct: 342 IDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNC 401

Query: 529 PPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVN 588
            PN  TY  ++   C+         LL+ V+D  +  D  T   L     K    + A N
Sbjct: 402 KPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFN 461

Query: 589 QLVEMCNLGLIPD 601
               M + GL PD
Sbjct: 462 IFNSMNSAGLEPD 474



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/280 (20%), Positives = 124/280 (44%), Gaps = 4/280 (1%)

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCG-- 385
           ++ L+ CL+K+     A  VY  ++    V     + ++++ +C +G         C   
Sbjct: 162 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 221

Query: 386 -LEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM-LDKGFTPDNYSFVGLLRGLCGARKI 443
            L    D  V  +L+   C+     +A +++  M  ++   P++ ++  L+ GLC A ++
Sbjct: 222 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRL 281

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           +EA  + Q +V      +   +T ++    + G   KA+++      +    +V +YT+ 
Sbjct: 282 EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTIL 341

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           I  L   G+ EEA  ++ +M    + P   T+  ++  +CKE  +    +LL  +     
Sbjct: 342 IDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNC 401

Query: 564 ELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           + +  T   L + + +   S  A   L  + + GL+PD +
Sbjct: 402 KPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRV 441


>gi|302816356|ref|XP_002989857.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
 gi|300142423|gb|EFJ09124.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
          Length = 394

 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 172/356 (48%), Gaps = 10/356 (2%)

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
           ++G M   G  P +  F  L+   C++    +A Q+   MI +        +TV+I    
Sbjct: 1   LLGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLC 60

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
           ++ +LD+A   +E+MVQ+GC P+ VTYT L+    +A  +       + + S+GH+P+LV
Sbjct: 61  KINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELV 120

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL 386
            +  +++   K G  D AL +   L      P    + +L+  +C   R     +L    
Sbjct: 121 TYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEAREL---F 177

Query: 387 EVEA----DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
           E+ A    D++VY + +S  CKAG  ++A  ++  M++ G  PD  S+  ++  LC   +
Sbjct: 178 EMAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNR 237

Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV--EKYPLDVVSY 500
           + EA  +    +         V T +VD L ++ R  +A  +  R +   ++ P  VV+Y
Sbjct: 238 VSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAP-SVVTY 296

Query: 501 TVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
           +  I GL +  R ++AYI+  +M+     P+  TY  ++ +FCK   +   + L Q
Sbjct: 297 SAVIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQ 352



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 105/427 (24%), Positives = 186/427 (43%), Gaps = 47/427 (11%)

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           ++GE+   G      TF   +R           L+ F +M      P+ F   +V+  L 
Sbjct: 1   LLGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLC 60

Query: 166 KIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
           KI ++DL      ++++   LP+ +++ + + +L K         +   M+ KG  P + 
Sbjct: 61  KINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELV 120

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            +  ++N +CK GRI +A  L+  +   G S S + ++ LIDG  +  R + A  L+E  
Sbjct: 121 TYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFE-- 178

Query: 282 VQNGCSPNVVTYTSLIKGFMEA-KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           +  G   +V+ YTS I G  +A K+       + M+E+ G APD V +NV+I  L K   
Sbjct: 179 MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEA-GCAPDPVSYNVIIYSLCKDNR 237

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLVCGLEVEADLVVYN 396
             +A ++ D  +E K +P       L+  +C S R      +L +++   +    +V Y+
Sbjct: 238 VSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYS 297

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
           A++   CKA   + A  +   M   G  PD  ++  ++   C   ++DEA  ++Q     
Sbjct: 298 AVIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQ----- 352

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
                         R+ E G C                 DVV+Y + IRG     + +EA
Sbjct: 353 --------------RMHERG-CAS---------------DVVAYNILIRGYCRAAKVDEA 382

Query: 517 YILYSQM 523
             +  +M
Sbjct: 383 IAMIEEM 389



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 47/210 (22%), Positives = 95/210 (45%), Gaps = 6/210 (2%)

Query: 81  HDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLE 140
            DV  +   IS + +  G+ +  + +  ++   GC     ++ + +    +        E
Sbjct: 185 QDVIVYTSFISGLCK-AGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKE 243

Query: 141 AFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE-----TQLPNFLSFNIALCNL 195
             D+       P      +++D L K  RV+    +L+       + P+ ++++  +  L
Sbjct: 244 LMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSAVIDGL 303

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
           CK + + +   V+  M R G  P+V  +  +++ FCK+GR+ EA +L   M   G +  V
Sbjct: 304 CKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCASDV 363

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
            A+ +LI G+ R  ++D A  + E+M   G
Sbjct: 364 VAYNILIRGYCRAAKVDEAIAMIEEMAGRG 393


>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
 gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
 gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 819

 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 113/432 (26%), Positives = 193/432 (44%), Gaps = 11/432 (2%)

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIA 191
           G   + +DEM   G + + ++  I++  +   G+V++G K+++    +  +PN + +N  
Sbjct: 187 GDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTI 246

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           +   CKL D+ N   V   +  KGF P +  F  ++N FCK G    + +LL  +   G 
Sbjct: 247 IGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGL 306

Query: 252 SLSVNAWTVLIDG-FRRLRRLDMAGYL-WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
            +SV     +ID  +R   ++D A  + W  ++ N C P+V TY  LI    +     +A
Sbjct: 307 RVSVWFLNNIIDAKYRHGYKVDPAESIGW--IIANDCKPDVATYNILINRLCKEGKKEVA 364

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
             FLD    +G  P+ + +  LI    K   YD A  +   + E    PD  T+  L+  
Sbjct: 365 VGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHG 424

Query: 370 VCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
           + +SG       +   L    V  D  +YN L+S  CK G    A  L++ MLD+   PD
Sbjct: 425 LVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPD 484

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
            Y +  L+ G   +   DEA  V+   V     V+   H A++     +G   +A+    
Sbjct: 485 AYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMN 544

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
           R   E    D  +Y+  I G ++      A  ++  M+     PN  TY  ++  FC + 
Sbjct: 545 RMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQG 604

Query: 547 NIKMVKRLLQDV 558
           + KM +   +++
Sbjct: 605 DFKMAEETFKEM 616



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/421 (20%), Positives = 170/421 (40%), Gaps = 29/421 (6%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
            DE  + G  PN  +   ++    K    D+  K+L +       P+ +++ I +  L  
Sbjct: 368 LDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVV 427

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              + +  ++   ++ +G  P+  ++ +L++  CK GR   A  L   M+          
Sbjct: 428 SGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYV 487

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  LIDGF R    D A  ++   V+ G   +VV + ++IKGF  + M   A + ++ + 
Sbjct: 488 YATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMN 547

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
            E   PD   ++ +ID   K      A+ ++  + + K  P+  T+ SL++  C  G F 
Sbjct: 548 EEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFK 607

Query: 378 LLPKLVCGLEVE---ADLVVYNALLSYFCKAGFP-NQAVKLYNTMLDKGFTPDNYSFVGL 433
           +  +    +++     ++V Y  L+    K      +AV  +  M+     P+  +F  L
Sbjct: 608 MAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCL 667

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           L+G          +    G V+  P  + H  +++              + F R   + +
Sbjct: 668 LQGF---------VKKTSGKVLAEPDGSNHGQSSLFS------------EFFHRMKSDGW 706

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
                +Y  A+  L   G  + A +   +M      P+  ++  +L  FC   N K  + 
Sbjct: 707 SDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRN 766

Query: 554 L 554
           +
Sbjct: 767 M 767



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/353 (20%), Positives = 151/353 (42%), Gaps = 5/353 (1%)

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
           P+V     LL+   K  R+ +A ++   M   G S+   +  +L+ G     ++++   L
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
            E     GC PN+V Y ++I G+ +      A+     L+ +G  P L     +I+   K
Sbjct: 228 IEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCK 287

Query: 338 MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL----EVEADLV 393
            G +  +  +   + E  L    +   +++      G + + P    G     + + D+ 
Sbjct: 288 EGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHG-YKVDPAESIGWIIANDCKPDVA 346

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            YN L++  CK G    AV   +    KG  P+N S+  L++  C +++ D A  +   +
Sbjct: 347 TYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQM 406

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
                  +   +  ++  L+ +G    A+ +  + I      D   Y + + GL + GR 
Sbjct: 407 AERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRF 466

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
             A +L+S+M    + P+AY Y  ++  F +  +    +++    ++  +++D
Sbjct: 467 LPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVD 519



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/312 (22%), Positives = 128/312 (41%), Gaps = 4/312 (1%)

Query: 294 TSLIKGFMEAKMFSIAFSFLD-MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
           + ++  + E+   S A    D ++E     PD++  N L+  L K     DA  VYD + 
Sbjct: 138 SHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMC 197

Query: 353 ELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPN 409
           +     D+Y+ C L+  +C  G+  +  KL+ G   +    ++V YN ++  +CK G   
Sbjct: 198 DRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIE 257

Query: 410 QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
            A  ++  +  KGF P   +F  ++ G C       +  +   +      V+      I+
Sbjct: 258 NAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNII 317

Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
           D     G      +     I      DV +Y + I  L + G+ E A     +     + 
Sbjct: 318 DAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLI 377

Query: 530 PNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQ 589
           PN  +Y  ++ ++CK +   +  +LL  + +   + D  T   L   +        AVN 
Sbjct: 378 PNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNM 437

Query: 590 LVEMCNLGLIPD 601
            V++ + G+ PD
Sbjct: 438 KVKLIDRGVSPD 449


>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial [Vitis vinifera]
          Length = 876

 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 106/421 (25%), Positives = 199/421 (47%), Gaps = 16/421 (3%)

Query: 147 RFGFTPNTFARNIVMDVLFKIGRVDLGI------KVLKETQL-PNFLSFNIALCNLCKLN 199
           R GF  +T     +  VL    R DLG       K+ KE    PN ++++I +  LC+  
Sbjct: 199 RLGFGLDTHVCTSL--VLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAG 256

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
            +     +   MV KG  P+ R + +L+   C +G   +A ++L  M T     +V+ +T
Sbjct: 257 RLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYT 316

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
           +LID   R  +++ A  ++ KM+++G  P ++T+ +LI G+ +      AF  L ++E  
Sbjct: 317 ILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKG 376

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
              P++  +N L++ L ++     A  +   +++  L+PD  T+  L+   C  G+ ++ 
Sbjct: 377 NCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMA 436

Query: 380 PKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
             +   +    +E D   + AL+   CK G   QA  +  +M+ KG + D  +F  L+ G
Sbjct: 437 FNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDG 496

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL- 495
            C   K  +   +++ +V N     AH     +D L +  + ++A  +  + +  KY L 
Sbjct: 497 HCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMM--KYGLV 554

Query: 496 -DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
             VV++T+ I G    G T  +  +  +MK     PN YTY +++   C    ++  + +
Sbjct: 555 PSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETI 614

Query: 555 L 555
           L
Sbjct: 615 L 615



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 110/434 (25%), Positives = 187/434 (43%), Gaps = 45/434 (10%)

Query: 136 GMVLEAFD---EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSF 188
           G + EAF    EM   G  P+T    +++     IG  D  +K+L E      +PN  ++
Sbjct: 256 GRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTY 315

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
            I +  LC+   +     V   M++ G  P +  F  L+N +CK G +  A+QLL +M  
Sbjct: 316 TILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEK 375

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
                ++  +  L++G  R+ +   A  L  ++V NG  P+ VTY  L+ GF +    ++
Sbjct: 376 GNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNM 435

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           AF+  + + S G  PD      LID L K+G  + A  +   +++  +  D  TF     
Sbjct: 436 AFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTF----- 490

Query: 369 TVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
                                       AL+   CK G       L+  M++       +
Sbjct: 491 ---------------------------TALIDGHCKIGKAKDVCFLFENMVENRCLTTAH 523

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV-HTAIVDRLIEAGRCHKAIQLFRR 487
           +F   L  L    K++EA N   G +M    V + V HT +++    AG    ++++  R
Sbjct: 524 TFNCFLDALGKDYKLNEA-NAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLER 582

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK--- 544
                   +V +YT+ I GL   GR EEA  +   M    V PN +TY V++ +  K   
Sbjct: 583 MKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGR 642

Query: 545 -ERNIKMVKRLLQD 557
            +R  ++V  ++++
Sbjct: 643 LDRAFQIVSTMVKN 656



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 116/506 (22%), Positives = 214/506 (42%), Gaps = 48/506 (9%)

Query: 48  LAPHIVHSTLL-NCPSDLIALSFFIW--CAKQRDYFHDVQSFDHMISVVTRLTGRFETVR 104
           L  H+  S +L NC  D +  +F ++   +K+ +   +  ++  +I  +    GR E   
Sbjct: 204 LDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCE-AGRLEEAF 262

Query: 105 GIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVL 164
            +  E+   GC    +T+ + ++      M    ++  DEM      PN     I++D L
Sbjct: 263 QLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRL 322

Query: 165 FKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFE 224
            + G+++    V ++                               M++ G  P +  F 
Sbjct: 323 CREGKIEEANGVFRK-------------------------------MLKHGLCPGIITFN 351

Query: 225 ILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN 284
            L+N +CK G +  A+QLL +M       ++  +  L++G  R+ +   A  L  ++V N
Sbjct: 352 ALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDN 411

Query: 285 GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
           G  P+ VTY  L+ GF +    ++AF+  + + S G  PD      LID L K+G  + A
Sbjct: 412 GLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQA 471

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLV----VYNA 397
             +   +++  +  D  TF +L+   C  G+     K VC L    VE   +     +N 
Sbjct: 472 NGILGSMVKKGISLDEVTFTALIDGHCKIGK----AKDVCFLFENMVENRCLTTAHTFNC 527

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
            L    K    N+A  +   M+  G  P   +   L+ G C A +   ++ + + +    
Sbjct: 528 FLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAG 587

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQ-LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
            + N + +T I++ L   GR  +A   LF  +     P +  +Y V ++  ++ GR + A
Sbjct: 588 CSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSP-NHFTYAVLVKAHVKAGRLDRA 646

Query: 517 YILYSQMKHIAVPPNAYTYRVMLLSF 542
           + + S M      PN++ Y  +L  F
Sbjct: 647 FQIVSTMVKNGCQPNSHIYSALLSGF 672



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/399 (24%), Positives = 171/399 (42%), Gaps = 14/399 (3%)

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           MV +GF      +  ++N  CK G +  A      ++ LG  L  +  T L+    R   
Sbjct: 162 MVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDD 221

Query: 271 LDMAGYLWEKMV-QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHN 329
           L  A  ++EKM  +  C PN VTY+ LI G  EA     AF     +  +G  P    + 
Sbjct: 222 LGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYT 281

Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS--------LLPK 381
           VLI     +G  D A+ + D +     VP+ +T+  L+  +C  G+          +L  
Sbjct: 282 VLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKH 341

Query: 382 LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
            +C       ++ +NAL++ +CK G+   A +L + M      P+  ++  L+ GLC   
Sbjct: 342 GLC-----PGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVS 396

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYT 501
           K  +A  + + +V N    +   +  +VD   + G+ + A  +F          D  ++T
Sbjct: 397 KSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFT 456

Query: 502 VAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
             I GL + GR E+A  +   M    +  +  T+  ++   CK    K V  L +++++ 
Sbjct: 457 ALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVEN 516

Query: 562 RIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           R     HT       + K +  + A   L +M   GL+P
Sbjct: 517 RCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVP 555



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 106/420 (25%), Positives = 184/420 (43%), Gaps = 16/420 (3%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD-----LGIK 175
           T+ + +  + +     M    F+ M   G  P+ F    ++D L K+GR++     LG  
Sbjct: 419 TYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSM 478

Query: 176 VLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGR 235
           V K   L   ++F   +   CK+    +V  +   MV          F   L+   K  +
Sbjct: 479 VKKGISLDE-VTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYK 537

Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
           + EA  +LG M+  G   SV   T+LI+G  R     ++  + E+M Q GCSPNV TYT 
Sbjct: 538 LNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTI 597

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           +I G         A + L  + S G +P+   + VL+    K G  D A  +   +++  
Sbjct: 598 IINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNG 657

Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVY-----NALLSYFCKAGFPNQ 410
             P+S+ + +LLS   LS        L    +++A  +       N L S+  +    + 
Sbjct: 658 CQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDH 717

Query: 411 AVKLYNTMLDKGF-TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
           A+K+ + +   G  T D Y+F  L+ GLC   +I EA  + Q +V +    +  + ++I+
Sbjct: 718 ALKIRDEIKKCGVPTEDLYNF--LVVGLCKEGRIIEADQLTQDMVKHGLFPDKAI-SSII 774

Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM-KHIAV 528
           +   +  +    ++  +  +  K+     SY   I GL   GR +EA  L S + +H  +
Sbjct: 775 EHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGI 834



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 94/388 (24%), Positives = 176/388 (45%), Gaps = 30/388 (7%)

Query: 85  SFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDE 144
           +F  +I  + +L GR E   GI+G + + G  +   TF   +  + +      V   F+ 
Sbjct: 454 TFTALIDGLCKL-GRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFEN 512

Query: 145 M--GRFGFTPNTFARNIVMDVLFKIGRVD-----LGIKVLKETQLPNFLSFNIALCNLCK 197
           M   R   T +TF  N  +D L K  +++     LG K++K   +P+ ++  I +   C+
Sbjct: 513 MVENRCLTTAHTF--NCFLDALGKDYKLNEANAMLG-KMMKYGLVPSVVTHTILIEGHCR 569

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
             + +    ++  M + G  PNV  + I++N  C  GR+ EA  +L  M + G S +   
Sbjct: 570 AGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFT 629

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM--EAKMFSIAFSFLDM 315
           + VL+    +  RLD A  +   MV+NGC PN   Y++L+ GF+     + + A S    
Sbjct: 630 YAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGD 689

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL-VPDSYTFCSLLSTVCLSG 374
           L++   + +   +N L   + ++   D AL + D + +  +   D Y F  L+  +C  G
Sbjct: 690 LDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDLYNF--LVVGLCKEG 747

Query: 375 RFSLLPKLVCGLEVEADLVVY--------NALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
           R     +L        D+V +        ++++ ++CK    +  ++    +LD  F P 
Sbjct: 748 RIIEADQLT------QDMVKHGLFPDKAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPS 801

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIV 454
             S+  ++ GL    ++ EA  +   +V
Sbjct: 802 FASYCWVIHGLRNEGRVQEAQKLVSDLV 829



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 73/313 (23%), Positives = 130/313 (41%), Gaps = 4/313 (1%)

Query: 293 YTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
           Y++L+    +  M  +AF     + +EG     + +  +++ L K G    A      +L
Sbjct: 139 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 198

Query: 353 ELKLVPDSYTFCSLLSTVC----LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFP 408
            L    D++   SL+   C    L   F +  K+        + V Y+ L+   C+AG  
Sbjct: 199 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRL 258

Query: 409 NQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAI 468
            +A +L   M++KG  P   ++  L++  C     D+A+ +   +       N H +T +
Sbjct: 259 EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTIL 318

Query: 469 VDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAV 528
           +DRL   G+  +A  +FR+ +       ++++   I G  + G    A+ L S M+    
Sbjct: 319 IDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNC 378

Query: 529 PPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVN 588
            PN  TY  ++   C+         LL+ V+D  +  D  T   L     K    + A N
Sbjct: 379 KPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFN 438

Query: 589 QLVEMCNLGLIPD 601
               M + GL PD
Sbjct: 439 IFNSMNSAGLEPD 451



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/280 (20%), Positives = 124/280 (44%), Gaps = 4/280 (1%)

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCG-- 385
           ++ L+ CL+K+     A  VY  ++    V     + ++++ +C +G         C   
Sbjct: 139 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 198

Query: 386 -LEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM-LDKGFTPDNYSFVGLLRGLCGARKI 443
            L    D  V  +L+   C+     +A +++  M  ++   P++ ++  L+ GLC A ++
Sbjct: 199 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRL 258

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           +EA  + Q +V      +   +T ++    + G   KA+++      +    +V +YT+ 
Sbjct: 259 EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTIL 318

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           I  L   G+ EEA  ++ +M    + P   T+  ++  +CKE  +    +LL  +     
Sbjct: 319 IDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNC 378

Query: 564 ELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           + +  T   L + + +   S  A   L  + + GL+PD +
Sbjct: 379 KPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRV 418


>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
          Length = 716

 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 105/481 (21%), Positives = 213/481 (44%), Gaps = 16/481 (3%)

Query: 79  YFHDVQ---------SFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIY 129
           +FH+++         S+  MI V+ +  GR      +  ++     V  A  +   +  Y
Sbjct: 137 FFHELKAQGLKPDDVSYTSMIWVLCK-AGRLGEAEELFAQMEAERSVPCAYAYNTMIMGY 195

Query: 130 WRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI---KVLKETQLPNFL 186
                +    +  + +   G  P+  + N ++  L K  +VD  +   +V+K+   PN  
Sbjct: 196 GSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSS 255

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           ++NI +  LC    V     ++  M     +PN+    I+++  CK  ++ EAY++    
Sbjct: 256 TYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESA 315

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
              G +     +  LIDG  +  ++D A  L+EKM+  G + N V YTSLI+ F      
Sbjct: 316 SQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRK 375

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
                    L   G  PDL   N  +DC+ K G  +    +++ +     +PD  ++  L
Sbjct: 376 EDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSIL 435

Query: 367 LSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           +  +  +G+      +   ++ +    D   YNA++  FCK+G  ++A ++   M +K  
Sbjct: 436 IHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCV 495

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
            P   ++  ++ GL    ++DEA  +++        +N  ++++++D   + GR  +A  
Sbjct: 496 QPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYL 555

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           +    + +    +V ++   +  L++     EA + +  MK +  PPN YTY +++   C
Sbjct: 556 ILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLC 615

Query: 544 K 544
           +
Sbjct: 616 R 616



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 108/485 (22%), Positives = 217/485 (44%), Gaps = 43/485 (8%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
            GRFE    ++  L   GC+    +F   L    +       L  F+ M +    PN+  
Sbjct: 198 AGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSST 256

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            NI++D+L   GRV+   ++L E +     PN L+ NI +  LCK   +     +     
Sbjct: 257 YNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESAS 316

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
           ++G  P+   +  L++   K G++ EAY+L   M+  G + +   +T LI  F    R +
Sbjct: 317 QRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKE 376

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
               +++++++ GC P++    + +    +A          + + S G  PD+  +++LI
Sbjct: 377 DGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILI 436

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKL------ 382
             L+K G   +  +++  + +     D+  + +++   C SG+    + +L ++      
Sbjct: 437 HGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQ 496

Query: 383 ---------VCGLE-------------------VEADLVVYNALLSYFCKAGFPNQAVKL 414
                    V GL                    +E ++V+Y++L+  F K G  ++A  +
Sbjct: 497 PTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLI 556

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
              M+ KG TP+ Y++  LL  L  A +I+EA+  +Q +       N + ++ +++ L  
Sbjct: 557 LEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCR 616

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
             + +KA   ++    +    +VV+YT  I GL + G   +AY L+ + K     P+A +
Sbjct: 617 VQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAAS 676

Query: 535 YRVML 539
           +  ++
Sbjct: 677 FNALI 681



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 156/319 (48%), Gaps = 9/319 (2%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           F E+ R G  P+    N  MD +FK G V+ G  + ++ +    LP+  S++I +  L K
Sbjct: 382 FKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTK 441

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
                   ++   M ++GF  + R +  +++ FCK G++ +AY++L  M       +V  
Sbjct: 442 AGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVAT 501

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  ++DG  ++ RLD A  L+E+    G   NVV Y+SLI GF +      A+  L+ + 
Sbjct: 502 YGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMM 561

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
            +G  P++   N L+D L K    ++AL  +  + E+K  P++YT+  L++ +C   +++
Sbjct: 562 KKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYN 621

Query: 378 LLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
                   ++ +    ++V Y  ++S   K G    A  L+      G  PD  SF  L+
Sbjct: 622 KAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALI 681

Query: 435 RGLCGARKIDEA--INVYQ 451
            G+  A +  EA    VYQ
Sbjct: 682 EGMSNANRAMEAYQTTVYQ 700



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 126/581 (21%), Positives = 229/581 (39%), Gaps = 80/581 (13%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           R E    ++ ++  VG  +    F   +R   R       L   DE+      P+    N
Sbjct: 60  RPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYN 119

Query: 159 IVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
           + +D   K G VD+  K   E +     P+ +S+   +  LCK   +   +++   M  +
Sbjct: 120 VCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAE 179

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
              P    +  ++  +   GR  +AY+LL  +   G   SV ++  ++    + R++D A
Sbjct: 180 RSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEA 239

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             L+E M ++   PN  TY  +I           A+  LD +E     P+L+  N+++D 
Sbjct: 240 LSLFEVMKKDA-EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDR 298

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEA 390
           L K    ++A  +++   +    PD  T+CSL+  +   G+    + L  K++      A
Sbjct: 299 LCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGH-NA 357

Query: 391 DLVVYNALLSYF--------------------C---------------KAGFPNQAVKLY 415
           + VVY +L+  F                    C               KAG   +   ++
Sbjct: 358 NPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIF 417

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
             +   GF PD  S+  L+ GL  A +  E  N++  +     A++A  + A+VD   ++
Sbjct: 418 EDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKS 477

Query: 476 GRCHKAIQ-----------------------------------LFRRAIVEKYPLDVVSY 500
           G+ HKA +                                   LF  A  +   L+VV Y
Sbjct: 478 GKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLY 537

Query: 501 TVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
           +  I G  + GR +EAY++  +M    + PN YT+  +L +  K   I       Q + +
Sbjct: 538 SSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKE 597

Query: 561 ARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            +   + +T   L   + +    + A     +M   GL+P+
Sbjct: 598 MKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPN 638



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 81/330 (24%), Positives = 153/330 (46%), Gaps = 4/330 (1%)

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
           R+ +A   + +M  L    + +A+TVLI      RR + A  L  +M + G    V  +T
Sbjct: 25  RLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFT 84

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
           +L++        + A + +D ++     PD+V +NV IDC  K G+ D A   +  L   
Sbjct: 85  TLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQ 144

Query: 355 KLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADL---VVYNALLSYFCKAGFPNQA 411
            L PD  ++ S++  +C +GR     +L   +E E  +     YN ++  +  AG    A
Sbjct: 145 GLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDA 204

Query: 412 VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
            KL   + ++G  P   SF  +L  L   RK+DEA+++++ ++  +   N+  +  I+D 
Sbjct: 205 YKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFE-VMKKDAEPNSSTYNIIIDM 263

Query: 472 LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
           L   GR  +A ++           ++++  + +  L +  + EEAY ++         P+
Sbjct: 264 LCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPD 323

Query: 532 AYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
             TY  ++    K+  +    RL + ++DA
Sbjct: 324 CVTYCSLIDGLGKKGQVDEAYRLFEKMLDA 353



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/389 (23%), Positives = 163/389 (41%), Gaps = 39/389 (10%)

Query: 136 GMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE----TQLPNFLSF 188
           G V EA   F++M   G   N      ++   F  GR + G KV KE       P+    
Sbjct: 338 GQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLL 397

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           N  +  + K  +V   + +   +   GF P+VR + IL++   K G+  E   +   M  
Sbjct: 398 NTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQ 457

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
            G +L   A+  ++DGF +  ++  A  + E+M +    P V TY +++ G  +      
Sbjct: 458 QGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDE 517

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A+   +  +S+G   ++V ++ LID   K+G  D+A  + + +++  L P+ YT      
Sbjct: 518 AYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYT------ 571

Query: 369 TVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
                                     +N+LL    KA   N+A+  + +M +    P+ Y
Sbjct: 572 --------------------------WNSLLDALVKAEEINEALVCFQSMKEMKCPPNTY 605

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
           ++  L+ GLC  +K ++A   +Q +       N   +T ++  L + G    A  LF R 
Sbjct: 606 TYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERF 665

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAY 517
                  D  S+   I G+    R  EAY
Sbjct: 666 KANGGIPDAASFNALIEGMSNANRAMEAY 694



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 91/382 (23%), Positives = 175/382 (45%), Gaps = 9/382 (2%)

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
           LPN    ++A   L +   + +    + +M R  F P    + +L+    +  R   A +
Sbjct: 8   LPNQACADLAAA-LVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALE 66

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           LL  M  +G  + V+ +T L+    R  ++  A  L +++  +   P++V Y   I  F 
Sbjct: 67  LLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFG 126

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           +A    +A  F   L+++G  PD V +  +I  L K G   +A +++  +   + VP +Y
Sbjct: 127 KAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAY 186

Query: 362 TFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTM 418
            + +++     +GRF    KL+  L        +V +N++L+   K    ++A+ L+  M
Sbjct: 187 AYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM 246

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
             K   P++ ++  ++  LC   +++EA  +   +   +   N      +VDRL +A + 
Sbjct: 247 -KKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKL 305

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            +A ++F  A       D V+Y   I GL + G+ +EAY L+ +M       N   Y  +
Sbjct: 306 EEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSL 365

Query: 539 LLSFC----KERNIKMVKRLLQ 556
           + +F     KE   K+ K L++
Sbjct: 366 IRNFFIHGRKEDGHKVFKELIR 387


>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
 gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
          Length = 896

 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 116/535 (21%), Positives = 218/535 (40%), Gaps = 45/535 (8%)

Query: 79  YFHDVQS---------FDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIY 129
           +FH+++S         +  MI V+ +  GR      + G++     V  A  +   +  Y
Sbjct: 274 FFHELKSQGLKPDDVSYTSMIWVLCK-AGRLSEAEELFGQMETERAVPCAYAYNTMIMGY 332

Query: 130 WRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI---KVLKETQLPNFL 186
                +    +  D++   G  P+  + N ++  L K  +VD  +   + +K+   PN  
Sbjct: 333 GSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDAEPNSS 392

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           ++NI +  LC    V     +   M   G +PN+    I+++  CK  +   AY++    
Sbjct: 393 TYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETA 452

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
              G + +   +  LIDG  +   +D A  L+E M+  G + N V YTSLI+ F      
Sbjct: 453 SQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRK 512

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
                    +   G  PDL   N  +DC+ K G  +    +++ +     +PD  +    
Sbjct: 513 EDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRS---- 568

Query: 367 LSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
                                       Y+ L+    KAG   +   +++ M  +GF  D
Sbjct: 569 ----------------------------YSILIHGLTKAGQARETSSIFHAMKQQGFALD 600

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
             ++  ++ G C + K+D+A  V + + +         + +I+D L +  R  +A  LF 
Sbjct: 601 ARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFE 660

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
            A  +   L+V+ Y+  I G  + GR +EAY++  +M    + PN YT+  ++ +  K  
Sbjct: 661 EAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAE 720

Query: 547 NIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            I       Q + + +   + +T   L   + +    + A     EM   GL+P+
Sbjct: 721 EINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPN 775



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 168/343 (48%), Gaps = 11/343 (3%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           F EM R G  P+    N  MD +FK G V+ G  + ++ +    LP+  S++I +  L K
Sbjct: 519 FKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTK 578

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
                    +   M ++GF  + R +  +++ FCK G++ +AY++L  M       +V  
Sbjct: 579 AGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVAT 638

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  +IDG  ++ RLD A  L+E+    G   NV+ Y+SLI GF +      A+  L+ + 
Sbjct: 639 YGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMM 698

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
            +G  P++   N L+D L K    ++AL  +  + E+K  P++YT+  L++ +C   +++
Sbjct: 699 KKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYN 758

Query: 378 LLPKLVCGLEVE-----ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
                V   E++      ++V Y  +++   K G    A  L+      G TPD  SF  
Sbjct: 759 --KAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNA 816

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
           L+ G+  A +  EA +V++   +    +N     +++D L +A
Sbjct: 817 LIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDALNKA 859



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 108/485 (22%), Positives = 211/485 (43%), Gaps = 43/485 (8%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
            G+FE    ++ +L   GC+    +F   L    +       L  F+ M +    PN+  
Sbjct: 335 AGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDA-EPNSST 393

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            NI++D+L   G+V+    +  E +     PN L+ NI +  LCK        ++     
Sbjct: 394 YNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETAS 453

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
           ++G  PN   +  L++   K G + +AY+L   M+  G + +   +T LI  F    R +
Sbjct: 454 QRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKE 513

Query: 273 MAGYLWEKMVQNGCSPN-----------------------------------VVTYTSLI 297
               ++++M + GC P+                                   V +Y+ LI
Sbjct: 514 DGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILI 573

Query: 298 KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
            G  +A       S    ++ +G A D   +N ++D   K G  D A +V + +   ++ 
Sbjct: 574 HGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVP 633

Query: 358 PDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKL 414
           P   T+ S++  +    R     +L +      +E +++VY++L+  F K G  ++A  +
Sbjct: 634 PTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLI 693

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
              M+ KG TP+ Y++  L+  L  A +I+EA+  +Q +     + N + ++ +++ L  
Sbjct: 694 LEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCR 753

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
             + +KA   ++    +    +VV+YT  I GL + G   +A  L+ + K     P+A +
Sbjct: 754 VQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAAS 813

Query: 535 YRVML 539
           +  ++
Sbjct: 814 FNALI 818



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 114/524 (21%), Positives = 216/524 (41%), Gaps = 49/524 (9%)

Query: 109 ELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIG 168
           ++  VG  +    F   +R   R       L   DE+      P+    N+ +D   K G
Sbjct: 207 QMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAG 266

Query: 169 RVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFE 224
            VD+  K   E +     P+ +S+   +  LCK   +S  +++ G M  +   P    + 
Sbjct: 267 NVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYN 326

Query: 225 ILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN 284
            ++  +   G+   AY+LL  +   G   SV ++  ++    + R++D A  L+E M ++
Sbjct: 327 TMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKD 386

Query: 285 ----------------------------------GCSPNVVTYTSLIKGFMEAKMFSIAF 310
                                             G  PN++T   ++    +AK F  A+
Sbjct: 387 AEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAY 446

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
              +     G  P+ V +  LID L K G+ DDA  +++ +L+     +   + SL+   
Sbjct: 447 EMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNF 506

Query: 371 CLSGR-------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
            + GR       F  + +  C    + DL + N  +    KAG   +   ++  +   GF
Sbjct: 507 FMHGRKEDGHKIFKEMNRRGC----QPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGF 562

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
            PD  S+  L+ GL  A +  E  +++  +     A++A  + A+VD   ++G+  KA +
Sbjct: 563 LPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYE 622

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           +     V++ P  V +Y   I GL +  R +EAY+L+ + K   +  N   Y  ++  F 
Sbjct: 623 VLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFG 682

Query: 544 KERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAV 587
           K   I     +L++++   +  + +T   L   + K    + A+
Sbjct: 683 KVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEAL 726



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 103/457 (22%), Positives = 187/457 (40%), Gaps = 41/457 (8%)

Query: 77  RDYFHDVQSFDHMISV---VTRL--TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWR 131
           RD       F ++++V   V RL    +FE    +    ++ GC   + T+   +    +
Sbjct: 414 RDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGK 473

Query: 132 GEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLS 187
                     F+ M   G   N      ++   F  GR + G K+ KE       P+   
Sbjct: 474 KGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTL 533

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
            N  +  + K  DV   + +   +   GF P+VR + IL++   K G+  E   +   M 
Sbjct: 534 LNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMK 593

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
             G +L   A+  ++DGF +  +LD A  + E+M      P V TY S+I G  +     
Sbjct: 594 QQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLD 653

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A+   +  +S+G   +++ ++ LID   K+G  D+A  + + +++  L P+ YT     
Sbjct: 654 EAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYT----- 708

Query: 368 STVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
                                      +N+L+    KA   N+A+  + +M +   +P+ 
Sbjct: 709 ---------------------------WNSLMDALVKAEEINEALICFQSMKEMKCSPNT 741

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
           Y++  L+ GLC  +K ++A   +Q +       N   +T ++  L + G    A  LF R
Sbjct: 742 YTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFER 801

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
                   D  S+   I G+    R  EAY ++ + +
Sbjct: 802 FKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETR 838



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 98/409 (23%), Positives = 185/409 (45%), Gaps = 10/409 (2%)

Query: 199 NDVSNVKDVIGMMVRKGF-YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
           +D++ ++ V+  M   G+  PN    + L++   +  R+ +A +++  M  L    + +A
Sbjct: 126 HDLAAMEKVLEEMSVLGYGVPNPACAD-LVSALVRTRRLDDAERVIAAMRRLKFRPAFSA 184

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +TVLI      R+ + A  L  +M + G    V  +T+L++          A + +D ++
Sbjct: 185 YTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVK 244

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
                PD+V +NV IDC  K G+ D A   +  L    L PD  ++ S++  +C +GR S
Sbjct: 245 GSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLS 304

Query: 378 LLPKLVCGLEVEADL---VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
              +L   +E E  +     YN ++  +  AG    A KL + + ++G  P   SF  +L
Sbjct: 305 EAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSIL 364

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
             L   RK+DEA+ +++ +   +   N+  +  I+D L  AG+  +A  +  R  +E   
Sbjct: 365 TCLGKKRKVDEALTLFEAM-KKDAEPNSSTYNIIIDMLCMAGKVEEAYMI--RDEMEHAG 421

Query: 495 L--DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVK 552
           L  ++++  + +  L +  + E AY ++         PN+ TY  ++    K+ N+    
Sbjct: 422 LFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAY 481

Query: 553 RLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           RL ++++D     +      L +  F             EM   G  PD
Sbjct: 482 RLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPD 530



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 93/380 (24%), Positives = 175/380 (46%), Gaps = 18/380 (4%)

Query: 175 KVLKETQLPNFLSFNIALCNLC----KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCF 230
           KVL+E  +  +   N A  +L     +   + + + VI  M R  F P    + +L+   
Sbjct: 133 KVLEEMSVLGYGVPNPACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAM 192

Query: 231 CKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNV 290
            +  +   A +LL  M  +G  + V  +T L+    R  R++ A  L +++  +   P++
Sbjct: 193 AEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDI 252

Query: 291 VTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDG 350
           V Y   I  F +A    +A+ F   L+S+G  PD V +  +I  L K G   +A +++  
Sbjct: 253 VLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQ 312

Query: 351 LLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGF 407
           +   + VP +Y + +++     +G+F    KL+  L+       +V +N++L+   K   
Sbjct: 313 METERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRK 372

Query: 408 PNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV-----YQGIVMNNPAVNA 462
            ++A+ L+  M  K   P++ ++  ++  LC A K++EA  +     + G+  N   VN 
Sbjct: 373 VDEALTLFEAM-KKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVN- 430

Query: 463 HVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQ 522
                +VDRL +A +   A ++F  A       + V+Y   I GL + G  ++AY L+  
Sbjct: 431 ----IMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFEN 486

Query: 523 MKHIAVPPNAYTYRVMLLSF 542
           M       N   Y  ++ +F
Sbjct: 487 MLDTGHNANPVVYTSLIRNF 506


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 112/495 (22%), Positives = 218/495 (44%), Gaps = 42/495 (8%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNV 204
           G  P+  +   V++  FK G  D       ++L    LP+ +++N  +  LCK   +   
Sbjct: 191 GSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKA 250

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
            +V+  MV+ G  P+   +  +L+ +C  G+  EA   L  M + G    V  +++L+D 
Sbjct: 251 MEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDY 310

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
             +  R   A  +++ M + G  P + TY +L++G+            LD++   G  PD
Sbjct: 311 LCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPD 370

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS------- 377
               ++LI   +K G  D A+ V+  + +  L P++ T+ +++  +C SGR         
Sbjct: 371 HYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFE 430

Query: 378 ------LLP------KLVCGL------EVEADLVV-------------YNALLSYFCKAG 406
                 L P       L+ GL      E   +L++             +N+++   CK G
Sbjct: 431 QMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEG 490

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
              ++ KL+  M+  G  P+  ++  L+ G C A K+DEA+ +  G+V      N   ++
Sbjct: 491 RVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYS 550

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
            +++   +  R   A+ LF+         D+++Y + ++GL +  RT  A  LY ++   
Sbjct: 551 TLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITES 610

Query: 527 AVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSA 586
                  TY ++L   CK +      ++ Q++    ++L+  T   +   + K   +  A
Sbjct: 611 GTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEA 670

Query: 587 VNQLVEMCNLGLIPD 601
            +  V   + GL+P+
Sbjct: 671 KDLFVAFSSNGLVPN 685



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 125/540 (23%), Positives = 221/540 (40%), Gaps = 84/540 (15%)

Query: 142 FDEMGRFG---FTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF----LSFNIALCN 194
           ++ M R G    TP+     I++    + GR+DLG   L       F    ++F   L  
Sbjct: 72  YNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 131

Query: 195 LCKLNDVSNVKD-VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT---LG 250
           LC     S+  D V+  M   G  PNV  + ILL   C   R  EA +LL +M      G
Sbjct: 132 LCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGG 191

Query: 251 TSLSVNAWTVLIDGFR-----------------------------------RLRRLDMAG 275
           +   V ++T +I+GF                                    + + +D A 
Sbjct: 192 SPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAM 251

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
            +   MV+NG  P+ +TY S++ G+  +     A  FL  + S+G  PD+V +++L+D L
Sbjct: 252 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYL 311

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG-------------RFSLLPK- 381
            K G   +A  ++D + +  L P+  T+ +LL      G             R  + P  
Sbjct: 312 CKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDH 371

Query: 382 -----LVCGLEVEA-------------------DLVVYNALLSYFCKAGFPNQAVKLYNT 417
                L+C    +                    + V Y A++   CK+G    A+  +  
Sbjct: 372 YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQ 431

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           M+D+G +P N  +  L+ GLC   K + A  +   ++     +N     +I+D   + GR
Sbjct: 432 MIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 491

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
             ++ +LF   +      +V++Y   I G    G+ +EA  L S M  + + PN  TY  
Sbjct: 492 VIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYST 551

Query: 538 MLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLG 597
           ++  +CK   ++    L +++  + +  D  T   + + +F+   +++A    V +   G
Sbjct: 552 LINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESG 611



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/470 (21%), Positives = 209/470 (44%), Gaps = 8/470 (1%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
            R    DV +++ +I+ + +     +    ++  + + G +    T+   L  Y      
Sbjct: 224 DRGILPDVVTYNSIIAALCKAQA-MDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQP 282

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIA 191
              +    +M   G  P+    +++MD L K GR     K+     K    P   ++   
Sbjct: 283 KEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTL 342

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           L        +  +  ++ +MVR G +P+  +F IL+  + K G++ +A  +   M   G 
Sbjct: 343 LQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 402

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
           + +   +  +I    +  R++ A   +E+M+  G SP  + Y SLI G      +  A  
Sbjct: 403 NPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEE 462

Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
            +  +   G   + +F N +ID   K G   ++  +++ ++ + + P+  T+ +L++  C
Sbjct: 463 LILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYC 522

Query: 372 LSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
           L+G+     KL+ G+    ++ + V Y+ L++ +CK      A+ L+  M   G +PD  
Sbjct: 523 LAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDII 582

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
           ++  +L+GL   R+   A  +Y  I  +   +    +  I+  L +      A+Q+F+  
Sbjct: 583 TYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNL 642

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            +    L+  ++ + I  LL+ GR +EA  L+       + PN +TYR+M
Sbjct: 643 CLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 692



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 90/459 (19%), Positives = 189/459 (41%), Gaps = 72/459 (15%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G    + G++  + R G       F + +  Y +       +  F +M + G  PN    
Sbjct: 350 GALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTY 409

Query: 158 NIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVI----- 208
             V+ +L K GRV+  +    +++ E   P  + +N  +  LC  N     +++I     
Sbjct: 410 GAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLD 469

Query: 209 ------------------------------GMMVRKGFYPNVRMFEILLNCFCKMGRIAE 238
                                          +MVR G  PNV  +  L+N +C  G++ E
Sbjct: 470 RGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDE 529

Query: 239 AYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIK 298
           A +LL  M+++G   +   ++ LI+G+ ++ R++ A  L+++M  +G SP+++TY  +++
Sbjct: 530 AMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQ 589

Query: 299 GFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP 358
           G  + +  + A      +   G   +L  +N+++  L K    DDAL ++  L       
Sbjct: 590 GLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNL------- 642

Query: 359 DSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
                                    C ++++ +   +N ++    K G  ++A  L+   
Sbjct: 643 -------------------------CLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAF 677

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
              G  P+ +++  +   + G   ++E   ++  +  N   V++ +   IV  L++ G  
Sbjct: 678 SSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEI 737

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAY 517
            +A         + + L+  + ++ I  LL GG+ +E Y
Sbjct: 738 TRAGTYLSMIDEKHFSLEASTASLFI-DLLSGGKYQEYY 775



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 98/219 (44%), Gaps = 4/219 (1%)

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
           EV  DL  Y  L+   C+AG  +        ++ KGF  D  +F  LL+GLC  ++  +A
Sbjct: 82  EVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 141

Query: 447 IN-VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK---YPLDVVSYTV 502
           ++ V + +       N   +  ++  L +  R  +A++L      ++    P DVVSYT 
Sbjct: 142 MDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTT 201

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
            I G  + G +++AY  Y +M    + P+  TY  ++ + CK + +     +L  ++   
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261

Query: 563 IELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           +  D  T   +            A+  L +M + G+ PD
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPD 300


>gi|297842741|ref|XP_002889252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335093|gb|EFH65511.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 780

 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 125/530 (23%), Positives = 231/530 (43%), Gaps = 16/530 (3%)

Query: 23  ISFKSIHQISSPKVCATTHQDFPIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHD 82
           IS + I  ++  K      +     L+ +I+ S +    +  +   FFIW A +R+    
Sbjct: 33  ISGEVISILAKKKPIEPALEPLVPFLSKNIITSVIKEEVNRQLGFRFFIW-ASRRERLRS 91

Query: 83  VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF 142
            +SF  +I +++   G  +     + EL   G  + +  F + +  Y +  +    +E+F
Sbjct: 92  GESFGLVIDMLSEDNG-CDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGLAEKAVESF 150

Query: 143 DEMGRFGFTPNTFARNIVM------DVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLC 196
             M  F   P+ F  N+++      DV F +    +  ++LK    PN  +F I +  L 
Sbjct: 151 GRMKEFDCRPDVFTYNVILRIMMREDVFFMLA-FAVYNEMLKCNCSPNLYTFGILMDGLY 209

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
           K    S+ + +   M  +G  PN   + IL++  C+ G   +A +L   M   G      
Sbjct: 210 KKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSPEDARKLFYEMKASGNYPDSV 269

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
           A   L+DGF +L R+  A  L     ++G    +  Y+SLI G   A+ ++ AF     +
Sbjct: 270 AHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANM 329

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
                 PD++ + +LI  LSK G  +DAL +   +    + PD+Y + +++  +C  G  
Sbjct: 330 LKRNIKPDIILYTILIQGLSKAGKIEDALKLLRSMPSKGITPDTYCYNAVIKALCGRGLL 389

Query: 377 SLLPKLVCGL-EVEA--DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
                L   + E E+  D   +  L+   C+ G   +A +++  +   G +P   +F  L
Sbjct: 390 EEGRSLQLEMSETESFPDACTHTILICSMCRNGLVRKAEEIFLEIEKSGCSPSVATFNAL 449

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAV----NAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
           + GLC + ++ EA  +   + +  PA      AH      D ++++G   KA +      
Sbjct: 450 IDGLCKSGELKEARLLLHKMEVGRPASLFLRLAHSGNRSFDTMVQSGSILKAYKNLAHFA 509

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
                 D+VSY V I G    G  + A  L + ++   + P++ TY  ++
Sbjct: 510 DTGNSPDIVSYNVLINGFCREGDIDGALKLLNVLQLKGLSPDSVTYNTLI 559



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 80/323 (24%), Positives = 148/323 (45%), Gaps = 4/323 (1%)

Query: 240 YQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG 299
           +Q L  + + G S+    + VLI  + ++   + A   + +M +  C P+V TY  +++ 
Sbjct: 112 WQTLEELKSGGVSVDSYCFCVLISAYAKMGLAEKAVESFGRMKEFDCRPDVFTYNVILRI 171

Query: 300 FM-EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP 358
            M E   F +AF+  + +     +P+L    +L+D L K G   DA  ++D +    + P
Sbjct: 172 MMREDVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISP 231

Query: 359 DSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLY 415
           +  T+  L+S +C  G      KL   ++      D V +NALL  FCK G   +A +L 
Sbjct: 232 NRVTYTILISGLCQRGSPEDARKLFYEMKASGNYPDSVAHNALLDGFCKLGRMVEAFELL 291

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
                 GF      +  L+ GL  AR+  +A  +Y  ++  N   +  ++T ++  L +A
Sbjct: 292 RLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKA 351

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
           G+   A++L R    +    D   Y   I+ L   G  EE   L  +M      P+A T+
Sbjct: 352 GKIEDALKLLRSMPSKGITPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTH 411

Query: 536 RVMLLSFCKERNIKMVKRLLQDV 558
            +++ S C+   ++  + +  ++
Sbjct: 412 TILICSMCRNGLVRKAEEIFLEI 434



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 91/385 (23%), Positives = 168/385 (43%), Gaps = 51/385 (13%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV---LKETQ-LPNFLSFNIALC 193
            L+    M   G TP+T+  N V+  L   G ++ G  +   + ET+  P+  +  I +C
Sbjct: 357 ALKLLRSMPSKGITPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILIC 416

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
           ++C+   V   +++   + + G  P+V  F  L++  CK G + EA  LL  M  +G   
Sbjct: 417 SMCRNGLVRKAEEIFLEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKM-EVGRPA 475

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEK------MVQNGCSPNVVTYTSLIKGFMEAKMFS 307
           S+    +   G R    +  +G + +           G SP++V+Y  LI GF       
Sbjct: 476 SL-FLRLAHSGNRSFDTMVQSGSILKAYKNLAHFADTGNSPDIVSYNVLINGFCREGDID 534

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A   L++L+ +G +PD V +N LI+ L ++G  ++A  ++    + +  P  Y   SL+
Sbjct: 535 GALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAVYR--SLM 592

Query: 368 STVCLSGR----FSL----LPKLVC--------------------------GLEVEAD-- 391
           +  C   +    F+L    L K+ C                           L+   D  
Sbjct: 593 TWSCRRRKLLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTRKDEL 652

Query: 392 -LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
            L  Y   L   C++G  ++A+ +++ + +K       S V L+ GLC   ++D AI+V+
Sbjct: 653 TLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIDVF 712

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEA 475
              + NN  +   V   ++  L+++
Sbjct: 713 LYTLDNNFKLMPRVCNYLLSSLLQS 737


>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
 gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
          Length = 795

 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 128/540 (23%), Positives = 241/540 (44%), Gaps = 27/540 (5%)

Query: 70  FIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIY 129
            + C ++ D   D  S+  ++    R  G       +  ++ R G      T+   L+  
Sbjct: 229 LLMCMRKLDLKPDSYSYCTLVDGYCR-DGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGL 287

Query: 130 WRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNF 185
            R   Y   L  +  M + G TPN      ++D LFK+G     +     +L      + 
Sbjct: 288 CRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSI 347

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGL 245
            +FN  +  LCK+ ++   K+    M   G  P+   +  L + +CK+G + EA+++   
Sbjct: 348 YAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEK 407

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           M       S+  +  LI G    +++     L  +M   G SPNVVTY +LI G+ +   
Sbjct: 408 MEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGR 467

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
              AFS    +  +G AP+++  + ++  L ++G  D+A  +   +++  LV D      
Sbjct: 468 LDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHR---- 523

Query: 366 LLSTVCLSG-RFSLLPKLVC-----GLEVEA------DLVVYNALLSYFCKAGFPNQAVK 413
                CL   + + + KL C      L+  A      + VVYN  ++  CK+G  N A +
Sbjct: 524 -----CLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARR 578

Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
            +  +    FTPDN+++  L+ G   A  ++EA N+   +V      N   + A+++ L 
Sbjct: 579 FFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLC 638

Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
           ++G   +A +LF +  ++    +VV+Y + I G  + G   EA  L  +M    + P+  
Sbjct: 639 KSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSII 698

Query: 534 TYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEM 593
           TY  ++  FCK+ +++   +LL ++  + ++    T  +L +   + H     +++L  M
Sbjct: 699 TYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQ-HGDVKKMSKLHNM 757



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 105/430 (24%), Positives = 190/430 (44%), Gaps = 35/430 (8%)

Query: 124 LFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP 183
           + L++Y    M    L  FD MG++G                               + P
Sbjct: 1   MILKVYAEKGMVKNALHVFDNMGKYG-------------------------------RKP 29

Query: 184 NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
           +  S N  L NL K  +  +   V   M R    P+V    I++N +CK G++  A + +
Sbjct: 30  SLRSCNSLLSNLVKRGESYSAVLVYDQMRRLDIVPDVFTCAIMVNAYCKAGKVERAVEFV 89

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
             M  LG  L+  ++  L+DG+  L  ++ A  + + M + G   N VT T LIKG+ + 
Sbjct: 90  REMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEKGVMRNKVTLTLLIKGYCKQ 149

Query: 304 KMFSIAFSFLDMLESE-GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
                A   L  +E E G   D   +  LID   K+G   DA+ V D +L++ L  + + 
Sbjct: 150 CKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFV 209

Query: 363 FCSLLSTVCLSGRFSLLPKLVC---GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
             SL++  C +G+     +L+     L+++ D   Y  L+  +C+ G  ++A  + + ML
Sbjct: 210 CNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQML 269

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
            KG  P   ++  LL+GLC      +A+ ++  ++      N   +  ++D L + G   
Sbjct: 270 RKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFS 329

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
           +A+ L+   +       + ++   I GL + G  + A   + +M+ +   P+  TYR + 
Sbjct: 330 RALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLS 389

Query: 540 LSFCKERNIK 549
             +CK  N++
Sbjct: 390 DGYCKVGNVE 399



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 105/488 (21%), Positives = 219/488 (44%), Gaps = 10/488 (2%)

Query: 91  SVVTRLTGRFETVRGIV--GELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRF 148
           S+++ L  R E+   ++   ++ R+  V    T  + +  Y +       +E   EM + 
Sbjct: 36  SLLSNLVKRGESYSAVLVYDQMRRLDIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKL 95

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCKLNDVSNV 204
           GF  N  + N ++D    +G ++    VLK    +  + N ++  + +   CK   V   
Sbjct: 96  GFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEA 155

Query: 205 KDVIGMMVRK-GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLID 263
           + V+  M ++ G   +   +  L++ +CK+G++ +A ++   M+ +G  +++     LI+
Sbjct: 156 EKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLIN 215

Query: 264 GFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP 323
           G+ +  ++     L   M +    P+  +Y +L+ G+    + S AF+  D +  +G  P
Sbjct: 216 GYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEP 275

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL- 382
            +V +N L+  L + G Y DAL ++  +L+  + P+   +C+LL  +   G FS    L 
Sbjct: 276 TVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLW 335

Query: 383 --VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
             +    +   +  +N +++  CK G  + A + +  M + G  PD  ++  L  G C  
Sbjct: 336 DDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKV 395

Query: 441 RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSY 500
             ++EA  + + +       +  ++ +++  L  + +  K I L           +VV+Y
Sbjct: 396 GNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTY 455

Query: 501 TVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
              I G  + GR ++A+  Y +M      PN      ++ S  +   I     LLQ ++D
Sbjct: 456 GALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVD 515

Query: 561 ARIELDYH 568
             + LD+ 
Sbjct: 516 FDLVLDHR 523



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 97/423 (22%), Positives = 197/423 (46%), Gaps = 20/423 (4%)

Query: 132 GEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLS 187
           GEM G   E F  M   G  P+      + D   K+G V+   K+ ++ +     P+   
Sbjct: 361 GEMDG-AKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEM 419

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           +N  +  L     +S + D++  M  +G  PNV  +  L+  +C  GR+ +A+     MI
Sbjct: 420 YNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMI 479

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
             G + +V   + ++    RL R+D A  L +KMV      ++V     ++ F  A +  
Sbjct: 480 GKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVD----FDLVLDHRCLEDFQNADIRK 535

Query: 308 I-AFSFLDMLESEG---HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
           +  +   D L+        P+ V +N+ +  L K G  +DA   + GL      PD++T+
Sbjct: 536 LDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTY 595

Query: 364 CSLLSTVCLSG----RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
           C+L+     +G     F+L  ++V    +  ++  YNALL+  CK+G+ ++A +L++ + 
Sbjct: 596 CTLIHGFSAAGYVNEAFNLRDEMV-NKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLH 654

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
            KG  P+  ++  L+ G C +    EA+++   ++    + +   ++++++   +     
Sbjct: 655 LKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVE 714

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT-YRVM 538
           +A++L            + +++  + G ++ G  ++   L++ M H+A P    T ++ M
Sbjct: 715 EAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVKKMSKLHNMM-HMACPSAGITSHKQM 773

Query: 539 LLS 541
            LS
Sbjct: 774 ELS 776



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 119/559 (21%), Positives = 226/559 (40%), Gaps = 65/559 (11%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWR-GEMYGM--VLEAFDEMGRFGFTPN 153
            G+ E     V E+ ++G  + A ++   +  Y   G++ G   VL+   E G      N
Sbjct: 79  AGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEKG---VMRN 135

Query: 154 TFARNIVMDVLFKIGRVDLGIKVLKETQLPNFL-----SFNIALCNLCKLNDVSNVKDVI 208
                +++    K  +V+   KVL+E +  + +     ++   +   CK+  + +   V 
Sbjct: 136 KVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDAIRVR 195

Query: 209 GMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRL 268
             M++ G   N+ +   L+N +CK G++ E  +LL  M  L       ++  L+DG+ R 
Sbjct: 196 DEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRD 255

Query: 269 RRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH 328
                A  + ++M++ G  P VVTY +L+KG      +  A     ++   G  P+ V +
Sbjct: 256 GLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGY 315

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-------FSLLPK 381
             L+D L KMG +  AL ++D +L   +    Y F ++++ +C  G        F  + +
Sbjct: 316 CTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEE 375

Query: 382 LVCGLEVEADLVVYNALLSYFCKAGFPNQA---------------VKLYNTML------- 419
           L C    + D + Y  L   +CK G   +A               +++YN+++       
Sbjct: 376 LGC----KPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSK 431

Query: 420 -------------DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
                         +G +P+  ++  L+ G C   ++D+A + Y  ++    A N  + +
Sbjct: 432 KISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICS 491

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG-RTEEAYILYSQMKH 525
            IV  L   GR  +A  L ++ +      D+V     +        R  + + +   +  
Sbjct: 492 KIVSSLYRLGRIDEANMLLQKMV----DFDLVLDHRCLEDFQNADIRKLDCWKIADTLDE 547

Query: 526 IAVP---PNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHS 582
            A+    PN   Y + +   CK   +   +R    +       D  T   L         
Sbjct: 548 SAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGY 607

Query: 583 SSSAVNQLVEMCNLGLIPD 601
            + A N   EM N GL+P+
Sbjct: 608 VNEAFNLRDEMVNKGLVPN 626



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 70/312 (22%), Positives = 136/312 (43%), Gaps = 4/312 (1%)

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           ++K + E  M   A    D +   G  P L   N L+  L K G    A+ VYD +  L 
Sbjct: 2   ILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLD 61

Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAV 412
           +VPD +T   +++  C +G+     + V  +E    E + V YN+L+  +   G    A 
Sbjct: 62  IVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAK 121

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP-AVNAHVHTAIVDR 471
            +   M +KG   +  +   L++G C   K++EA  V + +   +   V+ + + A++D 
Sbjct: 122 GVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDG 181

Query: 472 LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
             + G+   AI++    +     +++      I G  + G+  E   L   M+ + + P+
Sbjct: 182 YCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPD 241

Query: 532 AYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLV 591
           +Y+Y  ++  +C++        +   ++   IE    T   L K + +F     A+    
Sbjct: 242 SYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWH 301

Query: 592 EMCNLGLIPDEM 603
            M   G+ P+E+
Sbjct: 302 LMLQRGVTPNEV 313


>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
          Length = 1014

 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 125/476 (26%), Positives = 219/476 (46%), Gaps = 13/476 (2%)

Query: 137 MVLEAFD---EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFN 189
           +V EAF    ++G  G  PN FA N ++D L K  R D   ++ KE       PN +++ 
Sbjct: 318 LVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYA 377

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
           I +  LCK   + +   +   M  KG    V  +  L+N +CK G +  A  LL  M+  
Sbjct: 378 ILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKE 437

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           G + +  +++ LI G  R   L  A  L  +M + G + N  T+T+LI GF + K    A
Sbjct: 438 GLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEA 497

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
               D +      P+ V  NV+I+    +G+   A  +YD ++E+ L PD+YT+ SL+S 
Sbjct: 498 ARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 557

Query: 370 VCLSGRFSLLPKLVCGLEVEADLVVYN----ALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
           +CL+   S   + V  LE  +  V+ N    ALL    + G   +   L++ M  +G   
Sbjct: 558 LCLTSGVSKANEFVADLE-NSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKL 616

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           D  SF  ++         +++  +++ +       +   +T ++D L +     +A+  +
Sbjct: 617 DLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCW 676

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
            + +++ Y  + V++TV I  L + G    A +L  +M    V PN +TY   L  F  E
Sbjct: 677 DQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATE 736

Query: 546 RNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            +++  K L   ++   +      +I L K + K      A++ + ++   G  PD
Sbjct: 737 GDMEKAKDLHSAMLQGHLASIVSFNI-LIKGLCKAGKIQEAIDLMRKITESGFSPD 791



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 108/449 (24%), Positives = 206/449 (45%), Gaps = 8/449 (1%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G  +  RG++  + + G    A ++   +    R       +E   EM   G   N +  
Sbjct: 422 GSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTF 481

Query: 158 NIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
             +++   K  ++D    L  K++    +PN ++FN+ +   C + ++     +   MV 
Sbjct: 482 TALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVE 541

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G  P+   +  L++  C    +++A + +  +      L+  + T L+ G  R  R   
Sbjct: 542 MGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTE 601

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
             +LW++M   G   ++V++T ++   ++      +      ++ +G  PD +F+  +ID
Sbjct: 602 TYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMID 661

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF---SLLPKLVCGLEVEA 390
            LSK  +   AL+ +D ++     P++ T   L++ +C SG      LL K +    V  
Sbjct: 662 ALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLP 721

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           +   YN  L YF   G   +A  L++ ML +G      SF  L++GLC A KI EAI++ 
Sbjct: 722 NKFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLM 780

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
           + I  +  + +   ++ I+  L + G  +KA +L+   + +    DVV+Y + IR     
Sbjct: 781 RKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVH 840

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVML 539
           G +++A  +Y+ M    V PN  TYR +L
Sbjct: 841 GESDKALGIYTNMIRSGVQPNWDTYRALL 869



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 118/507 (23%), Positives = 211/507 (41%), Gaps = 45/507 (8%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           +F   R +  ++ + G  +    +   +R Y               M   G   +    N
Sbjct: 178 QFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYN 237

Query: 159 IVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
           ++M  L K  RV   ++V    +      + +++   +   C++ ++     +   M+R 
Sbjct: 238 VLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRL 297

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           GF P+      +++   K   + EA+ L   +  LG   +V A+  LID   +  R D A
Sbjct: 298 GFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDA 357

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             L+++M   G  PN VTY  LI    +  M   A    D +  +G    +  +N LI+ 
Sbjct: 358 DRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLING 417

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----------------- 377
             K GS D A  +  G+++  L P + ++  L++ +C +G  S                 
Sbjct: 418 YCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWN 477

Query: 378 --LLPKLVCGL-------------------EVEADLVVYNALLSYFCKAGFPNQAVKLYN 416
                 L+ G                     V  + V +N ++  +C  G   +A +LY+
Sbjct: 478 NYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYD 537

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV-NAHVHTAIVDRLIEA 475
            M++ G  PDNY++  L+ GLC    + +A N +   + N+ AV N    TA++  L   
Sbjct: 538 QMVEMGLKPDNYTYRSLISGLCLTSGVSKA-NEFVADLENSYAVLNNFSLTALLYGLFRE 596

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
           GR  +   L+    V    LD+VS+T+ +   L+    E++ +L+ +MK   V P+   Y
Sbjct: 597 GRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFY 656

Query: 536 RVMLLSFCKERN-IKMVKRLLQDVIDA 561
             M+ +  KE N I+ +    Q VID 
Sbjct: 657 TCMIDALSKEENMIQALNCWDQMVIDG 683



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 101/440 (22%), Positives = 189/440 (42%), Gaps = 3/440 (0%)

Query: 168 GRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILL 227
           G   L +++  E    + + +N+ +  LCK   V    +V  +MV  G   +   +  L+
Sbjct: 216 GARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLV 275

Query: 228 NCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCS 287
             FC+M  +  A ++   MI LG   S    + +ID  R+   ++ A  L  K+   G  
Sbjct: 276 YGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMV 335

Query: 288 PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
           PNV  Y +LI    + + F  A      +   G  P+ V + +LI  L K G  +DAL +
Sbjct: 336 PNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCL 395

Query: 348 YDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCK 404
           +D + +  +    Y + SL++  C  G       L+ G+  E        Y+ L++  C+
Sbjct: 396 FDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCR 455

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV 464
            G  + A++L+  M ++G   +NY+F  L+ G C  +K+DEA  ++  ++ +N   N   
Sbjct: 456 NGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVT 515

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
              +++     G   KA QL+ + +      D  +Y   I GL       +A    + ++
Sbjct: 516 FNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLE 575

Query: 525 HIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSS 584
           +     N ++   +L    +E        L  ++    ++LD  +   +     K H   
Sbjct: 576 NSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKE 635

Query: 585 SAVNQLVEMCNLGLIPDEMW 604
            +     EM   G+ PD+++
Sbjct: 636 KSCVLFREMKEQGVKPDDIF 655



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 90/381 (23%), Positives = 171/381 (44%), Gaps = 3/381 (0%)

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           L +L K+   +  +D+   M++ G + +  ++   +  +C+   +  A  L+  M + G 
Sbjct: 170 LFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGV 229

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
             S   + VL+ G  +  R+  A  +   MV  G + + VTY +L+ GF   +   +A  
Sbjct: 230 KASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALR 289

Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
               +   G  P     + +ID L K    ++A  +   L +L +VP+ + + +L+  +C
Sbjct: 290 ITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLC 349

Query: 372 LSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
            + RF    +L   + G  +E + V Y  L+   CK G    A+ L++ M DKG     Y
Sbjct: 350 KNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVY 409

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
            +  L+ G C    +D A  +  G+V       A  ++ ++  L   G    A++L R  
Sbjct: 410 PYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREM 469

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
                  +  ++T  I G  +  + +EA  L+ +M    V PN  T+ VM+  +C   NI
Sbjct: 470 AERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNI 529

Query: 549 KMVKRLLQDVIDARIELDYHT 569
           +   +L   +++  ++ D +T
Sbjct: 530 RKAFQLYDQMVEMGLKPDNYT 550



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 89/401 (22%), Positives = 174/401 (43%), Gaps = 48/401 (11%)

Query: 245 LMITLGTSLSVNAWTV--LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           L ++L + ++VN +T   ++    ++R+  +A  L++KM+Q+G   +   YT+ I+ + E
Sbjct: 151 LGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCE 210

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
           ++    A   +  +ESEG     V +NVL+  L K     +A++V + ++ + +  D  T
Sbjct: 211 SRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVT 270

Query: 363 FCSLLSTVC---------------------------------------LSGRFSLLPKLV 383
           + +L+   C                                       +   FSL  KL 
Sbjct: 271 YRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKL- 329

Query: 384 CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
             L +  ++  YNAL+   CK    + A +L+  M  +G  P+  ++  L+  LC    I
Sbjct: 330 GDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMI 389

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           ++A+ ++  +      V  + + ++++   + G   +A  L    + E       SY+  
Sbjct: 390 EDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPL 449

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           I GL   G    A  L+ +M    +  N YT+  ++  FCK++ +    RL   +ID+ +
Sbjct: 450 IAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNV 509

Query: 564 ---ELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
              E+ ++  I     +     +    +Q+VEM   GL PD
Sbjct: 510 IPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEM---GLKPD 547



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/279 (22%), Positives = 126/279 (45%), Gaps = 5/279 (1%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GRF     +  E+A  G  +   +F + +    +          F EM   G  P+    
Sbjct: 597 GRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFY 656

Query: 158 NIVMDVLFK----IGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
             ++D L K    I  ++   +++ +   PN ++  + + NLCK   + + + +   M+ 
Sbjct: 657 TCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLA 716

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
               PN   +   L+ F   G + +A  L   M+  G   S+ ++ +LI G  +  ++  
Sbjct: 717 GNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQE 775

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L  K+ ++G SP+ ++Y+++I    +    + AF   + +  +G  PD+V +N+ I 
Sbjct: 776 AIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIR 835

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
             +  G  D AL +Y  ++   + P+  T+ +LLS + L
Sbjct: 836 WCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISL 874



 Score = 45.8 bits (107), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 40/184 (21%), Positives = 71/184 (38%), Gaps = 35/184 (19%)

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
           L  G T + Y+   +L  L   R+   A +++  ++ +   ++ +V+TA +    E+   
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
             A  L  R   E      V Y V + GL +  R +EA  + + M +I V  +  TYR +
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGL 598
           +  FC+   ++M  R+  D+I                                    LG 
Sbjct: 275 VYGFCRMEELEMALRITHDMI-----------------------------------RLGF 299

Query: 599 IPDE 602
           +P E
Sbjct: 300 VPSE 303



 Score = 40.4 bits (93), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 28/121 (23%), Positives = 56/121 (46%), Gaps = 4/121 (3%)

Query: 158 NIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           NI++  L K G++    DL  K+ +    P+ +S++  +  LCK+ D++   ++   M+ 
Sbjct: 761 NILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLY 820

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           KG  P+V  + I +      G   +A  +   MI  G   + + +  L+ G   +   D 
Sbjct: 821 KGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMLHYDF 880

Query: 274 A 274
           +
Sbjct: 881 S 881


>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
          Length = 719

 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 114/524 (21%), Positives = 224/524 (42%), Gaps = 41/524 (7%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTP--NTFARNIVMDVLFKIGRVD 171
           GC+   +T LLF              E + EM + G     NT     ++      G+V 
Sbjct: 200 GCLKAGKTELLF--------------EFYQEMIKAGTASDANTETVGCLIQAFCDSGQVA 245

Query: 172 LGIKVLKE---TQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILL 227
            G ++L +   T L P   ++N  +   C+  + +++ +V+  M+ +   P +  ++ ++
Sbjct: 246 RGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEII 305

Query: 228 NCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCS 287
           N  CK     EAY++   +   G +     +T +I G   +     A  LW +M+  G  
Sbjct: 306 NGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQ 365

Query: 288 PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
           PN  TY +++ G +++  F  A    + + ++G+    V  N +I  L   G  D+A +V
Sbjct: 366 PNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEV 425

Query: 348 YDGLLELKLVPDSYTFCSLLSTVCLSG----RFSLLPKLVCGLEVEADLVVYNALLSYFC 403
           +  + E  +  D+ T+ SL+   C  G    R +LL +LV   + +  + +Y  L+   C
Sbjct: 426 FKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELV-AQDPQPSVSLYELLIIKSC 484

Query: 404 KAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAH 463
           K G    A +L   M  KG  P+ Y++  +L G   +   +    +Y             
Sbjct: 485 KDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTA 544

Query: 464 VHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM 523
               I+  L   G+  +A ++F++        D ++Y   IRG  + G+  ++  L +++
Sbjct: 545 TCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNEL 604

Query: 524 KHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSS 583
               + P+A +Y  +++  C+  + +  KRL  D++   IE   H ++R           
Sbjct: 605 VAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEP--HANLR----------- 651

Query: 584 SSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTPVSLFDGFVPC 627
               + +  +C  G   + M R +G+L ++     + F+    C
Sbjct: 652 ---EHLISGLCKQGRATEGMDRLMGMLENKIKPKKAAFEDLAEC 692



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 98/459 (21%), Positives = 204/459 (44%), Gaps = 33/459 (7%)

Query: 211 MVRK--GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRL 268
           MVR   GF P+    E  + C C +G I EA ++   +   G  +S+ A   ++ G  + 
Sbjct: 145 MVRDIAGFIPDSASLEQYVKCLCGVGFIEEAIEVYFQLKEAGIRISIVACNSILSGCLKA 204

Query: 269 RRLDMAGYLWEKMVQNGCSPNVVTYT--SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
            + ++    +++M++ G + +  T T   LI+ F ++   +  +  L+     G  P   
Sbjct: 205 GKTELLFEFYQEMIKAGTASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNP 264

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL 386
            +N LI    +  +Y    +V   ++    +P  YT+  +++ +C +       ++   L
Sbjct: 265 TYNKLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDL 324

Query: 387 EVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
           +      D V+Y  ++   C+ G   +A KL+  M+DKG  P+ Y++  +L G   +   
Sbjct: 325 KDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDF 384

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           + A  +Y  +              I+  L   G+  +A ++F++        D ++Y   
Sbjct: 385 ERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSL 444

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           IRG  + G+ +E   L +++      P+   Y ++++  CK+ + +  KRLL D+    +
Sbjct: 445 IRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGL 504

Query: 564 ELDY-------HTSIRLTKFIF-----------KFHSSSSAVNQLV-EMCNLGLIPD--E 602
             +        H S++   F              + ++++  N+++ E+C+ G   +  E
Sbjct: 505 HPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASE 564

Query: 603 MWRKL---GLLSDETMTPVSLFDGFVPCERRAGNANHLL 638
           M++K+   G+ +D  +T  SL  GF   E + G + +LL
Sbjct: 565 MFKKMSETGIKAD-AITYNSLIRGFCK-EGKVGKSMNLL 601


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 124/512 (24%), Positives = 217/512 (42%), Gaps = 71/512 (13%)

Query: 48  LAPHIVHSTLLNCPSDLIALSFFIWCAKQR--DYFHDVQSFDHMISVVTRLTGRFETVRG 105
           L P+ V   L       ++L FF W  +    +  H+  + + ++  + +     +  + 
Sbjct: 32  LVPNTVGRVLQVIKDVDVSLFFFRWVTRSHRGESIHNNFTCNCLLRTLVKARRHHQAYQI 91

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
              EL    C     T+   +  + +        +   EM   G +P+    + ++  L 
Sbjct: 92  FRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALC 151

Query: 166 KIGRVDLGIKVLKETQ--LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMF 223
             G +   ++  +E+    P+ + FNI +  LCK N +S  + +I  M  +G  P+V  +
Sbjct: 152 NTGNLSRAMQYFRESVECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTY 211

Query: 224 EILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQ 283
             L++  CK  R+ EA QLL  M+      ++  +  LI G+ +     +A  L E+M+Q
Sbjct: 212 NSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQ 271

Query: 284 NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
           +G  P+VVT+ SLI GF +      A   L +++    AP+LV +NVLI  L   G  ++
Sbjct: 272 SGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANE 331

Query: 344 ALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFC 403
           A                   C LLS   + GR  +LP          D++ YN+L+  FC
Sbjct: 332 A-------------------CELLSE--MDGR-GILP----------DIITYNSLIGIFC 359

Query: 404 KAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAH 463
           +     QA ++ N M+++G  PD  S+  L   L  + + DEA                 
Sbjct: 360 RNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAF---------------- 403

Query: 464 VHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM 523
              A++D + +AG    AI             ++ ++   + GL    R +EA  L + M
Sbjct: 404 ---ALLDNMFDAG----AIP------------NLFTFNSLMEGLCCSRRLDEARHLLAVM 444

Query: 524 KHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
           + +   P A TY V++   CK   +   K +L
Sbjct: 445 RRVGCDPAASTYEVLVTGLCKAGRVDDAKEVL 476



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 95/398 (23%), Positives = 162/398 (40%), Gaps = 63/398 (15%)

Query: 267 RLRRLDMAGYLW-EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL 325
           + RR   A  ++ ++++   C  N +TY +LI GF +A     AF  L  ++  GH+PD+
Sbjct: 81  KARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDV 140

Query: 326 VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCG 385
           V H+ ++  L   G+   A+  +   +E    PDS                         
Sbjct: 141 VTHSSIVQALCNTGNLSRAMQYFRESVEC--APDS------------------------- 173

Query: 386 LEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
                  V++N L+   CKA   ++A ++   M ++G  PD  ++  L+ GLC + +++E
Sbjct: 174 -------VLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEE 226

Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
           A  + + +V      N   +  ++    + G    A QL  R I      DVV++   I 
Sbjct: 227 ARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLIS 286

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
           G  +  + ++A  +   MK     PN  TY V++   C          LL ++    I  
Sbjct: 287 GFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILP 346

Query: 566 D---YHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWR---KLGLLSDETMTPV- 618
           D   Y++ I +    F+   +    N +VE    G+IPD +      + LL  E      
Sbjct: 347 DIITYNSLIGIFCRNFQIEQAFQIQNLMVER---GVIPDGISYCTLAVALLKSERFDEAF 403

Query: 619 ----SLFD-GFVP-------------CERRAGNANHLL 638
               ++FD G +P             C RR   A HLL
Sbjct: 404 ALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLL 441



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/218 (21%), Positives = 90/218 (41%), Gaps = 7/218 (3%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
            GR      ++ E+   G +    T+   + I+ R        +  + M   G  P+  +
Sbjct: 326 AGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGIS 385

Query: 157 RNIVMDVLFKIGRVDLGIKVLKET----QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
              +   L K  R D    +L        +PN  +FN  +  LC    +   + ++ +M 
Sbjct: 386 YCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMR 445

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
           R G  P    +E+L+   CK GR+ +A ++L +M++ G    V++   ++    R  + D
Sbjct: 446 RVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQD 505

Query: 273 MAGYLWEKMV---QNGCSPNVVTYTSLIKGFMEAKMFS 307
           +A + ++++V      C P+       +K   E K  S
Sbjct: 506 LALHYFDQVVAAESKACDPSYQKLLEFVKVLREGKSNS 543


>gi|357140804|ref|XP_003571953.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g62370-like [Brachypodium distachyon]
          Length = 926

 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 103/435 (23%), Positives = 204/435 (46%), Gaps = 19/435 (4%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
            D++  +G+ P+    NIV+  L +  R+D    ++   Q     P+  + +I +   CK
Sbjct: 417 LDKLVAYGYEPSVLTYNIVIKYLCRQKRMDDARTLINLMQSRGVRPDMSTNSIMVTAYCK 476

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
           + D+ +   +   M + G  P++ +++ ++ C C++G   EA   L  MI  G       
Sbjct: 477 IGDIESALSLFDEMAKDGLEPSIAVYDSIIACLCRLGHFKEAEFTLRQMIEAGLVPDEVI 536

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T L++G+  +R    A  ++++M++ G  P    Y +LI G ++      A  +L+ + 
Sbjct: 537 YTTLLNGYSTMRHTKAACRVFDEMLERGLQPGSHAYGALINGLVKDNKIRKALHYLERML 596

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS-GRF 376
            EG A   V + +LI+   + G     LD+ D +++  + PD  T+ +L++ +C +  R 
Sbjct: 597 EEGFATQTVIYTMLINQFFRKGEEWLGLDLVDLMMKNHVEPDLITYGALVTGICRNIDRR 656

Query: 377 SLLPKLVCGLEVEADLVVYNAL--LSYFCKAGFPNQ-----------AVKLYNTMLDKGF 423
            + P L   L+ EA  +++  L  +S+  + G   +           A  +   +++ G 
Sbjct: 657 DMRPSLAAKLD-EARYMLFRLLPQISFGTRKGKQKKKRMSSEEKIDLAQNIIQDLVESGM 715

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
            PD + + G+L GLC A+K+D+A N+   +  +    N   +T +++  I  G  ++AIQ
Sbjct: 716 MPDLHIYNGMLNGLCRAQKMDDAYNLLSLMEQSGVLPNHVTYTILMNNDIRLGDSNRAIQ 775

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           LF     + +  D V Y   I+GL    RT+EA   +  M+     P+   Y  ++    
Sbjct: 776 LFNSLNSDGHVFDDVVYNTFIKGLSLARRTKEALSFFLMMQKRGFVPSKAAYDKIMEQLL 835

Query: 544 KERNIKMVKRLLQDV 558
            E +  +   +  D+
Sbjct: 836 AENSTDLALNIFDDM 850



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 105/503 (20%), Positives = 222/503 (44%), Gaps = 27/503 (5%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKV 176
           T+ + +  Y + +  G  +E ++ M R G +P+     ++M  L K G++     L  K+
Sbjct: 256 TYNVMMWWYCKNKWVGAAMELYNVMVRGGVSPDLRCYTMLMTSLCKEGKLVEAEQLFTKM 315

Query: 177 LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
           L+    P+ + F        K  +V  V+  +  + +      +     L +    M   
Sbjct: 316 LERGVFPDHVLFISIARFFPKGWEVVFVRKALKAVAKLDCSGELLELSSLASGCSNMSLQ 375

Query: 237 AEAYQLLGLMITLGTSLSVNA-WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
            EA +LL  M+     L ++A   ++I       RLD++ YL +K+V  G  P+V+TY  
Sbjct: 376 QEAERLLDEMMR-SNLLPIDAILNMMIIAMCSEGRLDVSYYLLDKLVAYGYEPSVLTYNI 434

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           +IK     K    A + +++++S G  PD+  +++++    K+G  + AL ++D + +  
Sbjct: 435 VIKYLCRQKRMDDARTLINLMQSRGVRPDMSTNSIMVTAYCKIGDIESALSLFDEMAKDG 494

Query: 356 LVPDSYTFCSLLSTVCLSG-----RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQ 410
           L P    + S+++ +C  G      F+L   +  GL    D V+Y  LL+ +        
Sbjct: 495 LEPSIAVYDSIIACLCRLGHFKEAEFTLRQMIEAGLV--PDEVIYTTLLNGYSTMRHTKA 552

Query: 411 AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
           A ++++ ML++G  P ++++  L+ GL    KI +A++  + ++    A    ++T +++
Sbjct: 553 ACRVFDEMLERGLQPGSHAYGALINGLVKDNKIRKALHYLERMLEEGFATQTVIYTMLIN 612

Query: 471 RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL------------LEGGRTEEAYI 518
           +    G     + L    +      D+++Y   + G+            L     E  Y+
Sbjct: 613 QFFRKGEEWLGLDLVDLMMKNHVEPDLITYGALVTGICRNIDRRDMRPSLAAKLDEARYM 672

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
           L+  +  I+        +   +S   E  I + + ++QD++++ +  D H    +   + 
Sbjct: 673 LFRLLPQISFGTRKGKQKKKRMS--SEEKIDLAQNIIQDLVESGMMPDLHIYNGMLNGLC 730

Query: 579 KFHSSSSAVNQLVEMCNLGLIPD 601
           +      A N L  M   G++P+
Sbjct: 731 RAQKMDDAYNLLSLMEQSGVLPN 753



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/282 (26%), Positives = 122/282 (43%), Gaps = 4/282 (1%)

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV 383
           D    + L+ C S +G+   AL  +D L+E + VP   +  +LL  +C +  +S +  L 
Sbjct: 42  DPALSDALVACHSHLGNIASALTCFDHLIESRYVPSPASSAALLRAMCAASMYSEVVDLF 101

Query: 384 C---GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
               G      +  +  L+   C  G  ++A  L++ ML  G  P    +  L+   C A
Sbjct: 102 VLWEGAPSPLPVSKFPFLIHGLCSKGAVDKARFLFDVMLGLGLAPPVRVYKSLVFTYCKA 161

Query: 441 RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV-EKYPLDVVS 499
           R+  EA  +   +V N   ++  + TA+V  L + GR   A+ +F R  V E   LD  +
Sbjct: 162 RRSLEADEMCCLMVKNGMYLDRMLGTALVKGLCQEGRLELAMDVFNRMRVNEGAQLDAYA 221

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           YT  I GL E G  +  + LY +MK   + P   TY VM+  +CK + +     L   ++
Sbjct: 222 YTTMIGGLFEHGYVDHGWELYQEMKDRGMEPTPVTYNVMMWWYCKNKWVGAAMELYNVMV 281

Query: 560 DARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
              +  D      L   + K      A     +M   G+ PD
Sbjct: 282 RGGVSPDLRCYTMLMTSLCKEGKLVEAEQLFTKMLERGVFPD 323



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 87/420 (20%), Positives = 172/420 (40%), Gaps = 44/420 (10%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNV 204
           G   + +A   ++  LF+ G VD G ++ +E +     P  +++N+ +   CK   V   
Sbjct: 214 GAQLDAYAYTTMIGGLFEHGYVDHGWELYQEMKDRGMEPTPVTYNVMMWWYCKNKWVGAA 273

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
            ++  +MVR G  P++R + +L+   CK G++ EA Q                       
Sbjct: 274 MELYNVMVRGGVSPDLRCYTMLMTSLCKEGKLVEAEQ----------------------- 310

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
                       L+ KM++ G  P+ V + S+ + F +          L  +     + +
Sbjct: 311 ------------LFTKMLERGVFPDHVLFISIARFFPKGWEVVFVRKALKAVAKLDCSGE 358

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLP 380
           L+  + L    S M    +A  + D ++   L+P       ++  +C  GR    + LL 
Sbjct: 359 LLELSSLASGCSNMSLQQEAERLLDEMMRSNLLPIDAILNMMIIAMCSEGRLDVSYYLLD 418

Query: 381 KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
           KLV     E  ++ YN ++ Y C+    + A  L N M  +G  PD  +   ++   C  
Sbjct: 419 KLV-AYGYEPSVLTYNIVIKYLCRQKRMDDARTLINLMQSRGVRPDMSTNSIMVTAYCKI 477

Query: 441 RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSY 500
             I+ A++++  +  +    +  V+ +I+  L   G   +A    R+ I      D V Y
Sbjct: 478 GDIESALSLFDEMAKDGLEPSIAVYDSIIACLCRLGHFKEAEFTLRQMIEAGLVPDEVIY 537

Query: 501 TVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
           T  + G      T+ A  ++ +M    + P ++ Y  ++    K+  I+     L+ +++
Sbjct: 538 TTLLNGYSTMRHTKAACRVFDEMLERGLQPGSHAYGALINGLVKDNKIRKALHYLERMLE 597



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 106/526 (20%), Positives = 204/526 (38%), Gaps = 64/526 (12%)

Query: 86  FDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEM 145
           FDH+I        R+         L R  C     + ++ L + W G    +       +
Sbjct: 66  FDHLIE------SRYVPSPASSAALLRAMCAASMYSEVVDLFVLWEGAPSPL------PV 113

Query: 146 GRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVK 205
            +F F  +       +D    +  V LG+ +    ++   L F       CK        
Sbjct: 114 SKFPFLIHGLCSKGAVDKARFLFDVMLGLGLAPPVRVYKSLVFTY-----CKARRSLEAD 168

Query: 206 DVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM-ITLGTSLSVNAWTVLIDG 264
           ++  +MV+ G Y +  +   L+   C+ GR+  A  +   M +  G  L   A+T +I G
Sbjct: 169 EMCCLMVKNGMYLDRMLGTALVKGLCQEGRLELAMDVFNRMRVNEGAQLDAYAYTTMIGG 228

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
                 +D    L+++M   G  P  VTY  ++  + + K    A    +++   G +PD
Sbjct: 229 LFEHGYVDHGWELYQEMKDRGMEPTPVTYNVMMWWYCKNKWVGAAMELYNVMVRGGVSPD 288

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP---K 381
           L  + +L+  L K G   +A  ++  +LE  + PD   F S+            +    K
Sbjct: 289 LRCYTMLMTSLCKEGKLVEAEQLFTKMLERGVFPDHVLFISIARFFPKGWEVVFVRKALK 348

Query: 382 LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
            V  L+   +L+  ++L S         +A +L + M+     P +     ++  +C   
Sbjct: 349 AVAKLDCSGELLELSSLASGCSNMSLQQEAERLLDEMMRSNLLPIDAILNMMIIAMCSEG 408

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYT 501
           ++D                   V   ++D+L+  G                Y   V++Y 
Sbjct: 409 RLD-------------------VSYYLLDKLVAYG----------------YEPSVLTYN 433

Query: 502 VAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK----ERNIKMVKRLLQD 557
           + I+ L    R ++A  L + M+   V P+  T  +M+ ++CK    E  + +   + +D
Sbjct: 434 IVIKYLCRQKRMDDARTLINLMQSRGVRPDMSTNSIMVTAYCKIGDIESALSLFDEMAKD 493

Query: 558 VIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
            ++  I + Y + I     +  F  +   + Q++E    GL+PDE+
Sbjct: 494 GLEPSIAV-YDSIIACLCRLGHFKEAEFTLRQMIEA---GLVPDEV 535



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 81/164 (49%)

Query: 204 VKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLID 263
            +++I  +V  G  P++ ++  +LN  C+  ++ +AY LL LM   G   +   +T+L++
Sbjct: 703 AQNIIQDLVESGMMPDLHIYNGMLNGLCRAQKMDDAYNLLSLMEQSGVLPNHVTYTILMN 762

Query: 264 GFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP 323
              RL   + A  L+  +  +G   + V Y + IKG   A+    A SF  M++  G  P
Sbjct: 763 NDIRLGDSNRAIQLFNSLNSDGHVFDDVVYNTFIKGLSLARRTKEALSFFLMMQKRGFVP 822

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
               ++ +++ L    S D AL+++D +     +P    + SLL
Sbjct: 823 SKAAYDKIMEQLLAENSTDLALNIFDDMFCHGYIPRYSNYSSLL 866



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 48/232 (20%), Positives = 97/232 (41%), Gaps = 12/232 (5%)

Query: 169 RVDLGIKVLKE----TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFE 224
           ++DL   ++++      +P+   +N  L  LC+   + +  +++ +M + G  PN   + 
Sbjct: 699 KIDLAQNIIQDLVESGMMPDLHIYNGMLNGLCRAQKMDDAYNLLSLMEQSGVLPNHVTYT 758

Query: 225 ILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN 284
           IL+N   ++G    A QL   + + G       +   I G    RR   A   +  M + 
Sbjct: 759 ILMNNDIRLGDSNRAIQLFNSLNSDGHVFDDVVYNTFIKGLSLARRTKEALSFFLMMQKR 818

Query: 285 GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
           G  P+   Y  +++  +      +A +  D +   G+ P    ++ L+  L+K   + + 
Sbjct: 819 GFVPSKAAYDKIMEQLLAENSTDLALNIFDDMFCHGYIPRYSNYSSLLLVLAKDNQWREV 878

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCL-SGRFSLLPKLVCGLEVEADLVVY 395
             V+  +LE     D+ T   LL  +C   G   L        E+E ++ +Y
Sbjct: 879 DRVFMMMLEKGRSLDTETK-KLLEELCYKQGELDL------AFELEGNMPLY 923


>gi|302763305|ref|XP_002965074.1| hypothetical protein SELMODRAFT_83127 [Selaginella moellendorffii]
 gi|300167307|gb|EFJ33912.1| hypothetical protein SELMODRAFT_83127 [Selaginella moellendorffii]
          Length = 484

 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 103/413 (24%), Positives = 183/413 (44%), Gaps = 10/413 (2%)

Query: 48  LAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIV 107
           L P +V S +   PS  +A  FF W +KQ  Y HDV  +  ++  + R     E VR   
Sbjct: 9   LEPRLVGSVIRRVPSLALARKFFDWSSKQEGYRHDVYCYTRLLHHLVRARRTREAVRFFK 68

Query: 108 GELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDV---L 164
            EL    C     +F + ++ +      G        M   G  P+  A N+V+     L
Sbjct: 69  RELC-AHCRPSLYSFTIIIQCFCNVRNPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDL 127

Query: 165 FKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFE 224
            ++GR  +    + +T  PN  ++N  +  LCK   +     +   +      P+   + 
Sbjct: 128 GRVGRALIKFGKMGKTCKPNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYS 187

Query: 225 ILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN 284
            L++  C+  R+  A ++  +M+         A+  + DGF + RR+D A  + + M+Q 
Sbjct: 188 TLVHGLCQAERLEAAIKVYDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQR 247

Query: 285 GCSPNVVTYTSLIKGFMEAK-MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
            C P+VVTY  +I G  + K     A+     +      P+ V +  +I  LSK+     
Sbjct: 248 RCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQR 307

Query: 344 ALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLS 400
            L+++ G+ +  L PD Y + SL+       +      ++       V  D+ +Y  L+S
Sbjct: 308 CLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLIS 367

Query: 401 YFCKAGFP--NQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
            +C+A  P  ++A+ L+  M D+   P+  ++  +LRGLC   + DEA  ++Q
Sbjct: 368 GYCRARKPRVDEALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQ 420



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 89/384 (23%), Positives = 181/384 (47%), Gaps = 9/384 (2%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+  SF I +   C + +       +G M   G  P+V  + ++L  +C +GR+  A   
Sbjct: 77  PSLYSFTIIIQCFCNVRNPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIK 136

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
            G M       +V  +  +I+G  +  ++D A +L+ ++  +   P+  TY++L+ G  +
Sbjct: 137 FGKMGKT-CKPNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQ 195

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
           A+    A    DM+    +  D   +N + D   K    D+AL+V   +++ +  P   T
Sbjct: 196 AERLEAAIKVYDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRRCKPSVVT 255

Query: 363 FCSLLSTVC-----LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
           +  +++ VC     +   + L  ++V G +   + V Y  ++    K     + ++L+  
Sbjct: 256 YNCIINGVCQYKNRIEEAYRLFQQMV-GSDCPPNAVTYGTMILGLSKIYEVQRCLELFKG 314

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA-- 475
           M   G +PD Y++  L+      RK+DEA ++ Q    N+   + +++T ++     A  
Sbjct: 315 MSKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARK 374

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
            R  +A+ LF+     +   +V++Y + +RGL + GR +EAY ++ +M  +   PN  T+
Sbjct: 375 PRVDEALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTF 434

Query: 536 RVMLLSFCKERNIKMVKRLLQDVI 559
           +VM +     R     +R+  D++
Sbjct: 435 KVMTMGMIHCRKTDKFERIFMDMV 458



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/326 (24%), Positives = 141/326 (43%), Gaps = 37/326 (11%)

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           G    V  +T L+    R RR   A   +++ +   C P++ ++T +I+ F   +    A
Sbjct: 39  GYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNPGRA 98

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
           + +L  + S G  PD+  +NV++     +G    AL  +  +                  
Sbjct: 99  WRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKM------------------ 140

Query: 370 VCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
                          G   + ++  YN +++  CK G  + AV L+  +      PD ++
Sbjct: 141 ---------------GKTCKPNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFT 185

Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
           +  L+ GLC A +++ AI VY  ++  N   +A  + A+ D   +  R  +A+++ +  I
Sbjct: 186 YSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMI 245

Query: 490 VEKYPLDVVSYTVAIRGLLE-GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
             +    VV+Y   I G+ +   R EEAY L+ QM     PPNA TY  M+L   K   +
Sbjct: 246 QRRCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEV 305

Query: 549 KMVKRLLQDVIDARIELD---YHTSI 571
           +    L + +  A +  D   YH+ I
Sbjct: 306 QRCLELFKGMSKAGLSPDGYAYHSLI 331



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/216 (21%), Positives = 88/216 (40%), Gaps = 6/216 (2%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
           QR     V +++ +I+ V +   R E    +  ++    C   A T+   +    +    
Sbjct: 246 QRRCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEV 305

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIA 191
              LE F  M + G +P+ +A + ++    K+ ++D    +L++       P+   +   
Sbjct: 306 QRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTL 365

Query: 192 LCNLCKLND--VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
           +   C+     V     +   M  +  +PNV  + I+L   CK GR  EAYQ+   M  +
Sbjct: 366 ISGYCRARKPRVDEALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKV 425

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
             S +   + V+  G    R+ D    ++  MV  G
Sbjct: 426 KCSPNRMTFKVMTMGMIHCRKTDKFERIFMDMVYKG 461


>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
 gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
          Length = 577

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 129/520 (24%), Positives = 228/520 (43%), Gaps = 76/520 (14%)

Query: 14  QRTQILKTIISFKSIHQISSPKV----------CATTHQDFPIILAPHIV--HSTLLNCP 61
           ++ +I + +  FKS+ +  SP V          C     D  + L   +   +     C 
Sbjct: 46  RKGRIDEALEQFKSMGEECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCE 105

Query: 62  SDLIALSFFI--WCAKQR-----DYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVG 114
            D+I+ S  I   C  QR     +YF  +++     +VVT           ++  L +V 
Sbjct: 106 PDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVT--------YSSLIDGLCKVD 157

Query: 115 CVIKAQTFLLFLR---IYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD 171
            V +A + L+ L+   +  R   Y  V+  F   G+    P+       +++L  +    
Sbjct: 158 RVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGK----PSE-----CLELLLHMKEKG 208

Query: 172 LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFC 231
            GI         N + FN  L  L K ++          +++ G  PNV  + + ++  C
Sbjct: 209 FGI---------NIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLC 259

Query: 232 KMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVV 291
           K G++ EAY++L  M+    +  V  ++ +IDGF +  R+D A  ++ +M+ + C P+ V
Sbjct: 260 KAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPV 319

Query: 292 TYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGL 351
           T+ +L+ GF E K    AF   + + + G  P L  +NVL+DC+    S + AL++Y  +
Sbjct: 320 TFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKM 379

Query: 352 LELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV-EADLVVYNALLSY--------- 401
              K  PD+ T+  L+  +C + R     +    L+V EAD VV N  + +         
Sbjct: 380 KRKKRQPDANTYAPLIQCLCRARRVDEAKEF---LDVMEADNVVPNGAICHALVEVLCKQ 436

Query: 402 ---------------FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
                           CKAG P++AV++   M+ KG  PD  ++V +LR LCG  ++D A
Sbjct: 437 GEVDEACSVLDNVVEICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSA 496

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
           I  ++ +     A     +T ++     A     A ++F 
Sbjct: 497 IAEFEKMASRGCAPGLVTYTLLIGEACSADMADDAFRIFE 536



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 175/349 (50%), Gaps = 11/349 (3%)

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
           M+  ++N FCK G++ +A++LL  M   G  + V   + LI G  R  R+D A   ++ M
Sbjct: 1   MYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM 60

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE-----SEGHAPDLVFHNVLIDCLS 336
            +  CSPNV+TY +++ G  +A          D +E     S G  PD++ ++ +ID L 
Sbjct: 61  GEE-CSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALC 119

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADL 392
           K    D A + +  +  +   P+  T+ SL+  +C   R    +SLL +L  G ++    
Sbjct: 120 KAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLK-GEDMVPRA 178

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           + YNA+++ F + G P++ ++L   M +KGF  +   F  +L  L    + ++A   ++ 
Sbjct: 179 MYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFER 238

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           ++ +    N   +   V  L +AG+  +A ++    +  K   DV++Y+  I G  + GR
Sbjct: 239 LLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGR 298

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
            ++A  ++++M      P+  T+  +L  F + +  +   R+ +D+++A
Sbjct: 299 MDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNA 347



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/482 (22%), Positives = 213/482 (44%), Gaps = 32/482 (6%)

Query: 136 GMVLEAF---DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK---ETQLPNFLSFN 189
           G V +AF   DEM   G   +    + ++  L + GR+D  ++  K   E   PN +++N
Sbjct: 13  GQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEECSPNVITYN 72

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRK-----GFYPNVRMFEILLNCFCKMGRIAEAYQLLG 244
             +  LCK N +    ++   M ++     G  P+V  +  +++  CK  R+ +AY+   
Sbjct: 73  TVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFK 132

Query: 245 LMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
            M  +G + +V  ++ LIDG  ++ R+D A  L  ++      P  + Y +++ GF    
Sbjct: 133 RMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQG 192

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
             S     L  ++ +G   +++  N ++  L K    + A   ++ LL+    P+  T+ 
Sbjct: 193 KPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYN 252

Query: 365 SLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
             +  +C +G+    + +L ++V   +V  D++ Y++++  FCKAG  ++A  ++  M+ 
Sbjct: 253 VAVHGLCKAGKVDEAYRILLEMV-ESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMV 311

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
               P   +F+ LL G    +K  EA  V++ +V          +  ++D +  A     
Sbjct: 312 HECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVES 371

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
           A++++ +   +K   D  +Y   I+ L    R +EA      M+   V PN      ++ 
Sbjct: 372 ALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVE 431

Query: 541 SFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
             CK+  +     +L +V++                I K      AV  + +M   G+ P
Sbjct: 432 VLCKQGEVDEACSVLDNVVE----------------ICKAGEPDEAVEVIEQMVLKGVRP 475

Query: 601 DE 602
           DE
Sbjct: 476 DE 477



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/284 (21%), Positives = 108/284 (38%), Gaps = 24/284 (8%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV ++  +I    +  GR +    +   +    C+    TF+  L  +   +        
Sbjct: 282 DVITYSSIIDGFCK-AGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRV 340

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCK 197
            ++M   GF P     N++MD +     V+  +    K+ ++ + P+  ++   +  LC+
Sbjct: 341 HEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCR 400

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEA------------------ 239
              V   K+ + +M      PN  +   L+   CK G + EA                  
Sbjct: 401 ARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEICKAGEPDE 460

Query: 240 -YQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIK 298
             +++  M+  G       +  ++     L R+D A   +EKM   GC+P +VTYT LI 
Sbjct: 461 AVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIG 520

Query: 299 GFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
               A M   AF   + + + G  P       L  CL   G  D
Sbjct: 521 EACSADMADDAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAGYQD 564


>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
 gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
          Length = 538

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 209/451 (46%), Gaps = 10/451 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D Q+F  + + + R +   E VR +   LA  G V    T+ L +       M    LE 
Sbjct: 18  DSQAFTLLATKLFRRSKFSEVVR-LFTLLASRGVVYGETTYKLVVDGLCGAGMANQALEL 76

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCK 197
             E+    +TP  F  N ++  L +  RV    KVL+    E+ +PN  ++ I L  LC+
Sbjct: 77  VRELSGV-YTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCR 135

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            N     ++V   M R G  PN   +  L+    + G I EA +++    +L     V  
Sbjct: 136 SNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVIT 195

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
            T ++ G  +  RLD A    E+M Q G  PN VTY++L+ GF +         F +  +
Sbjct: 196 CTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEK 255

Query: 318 S-EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
           + +G + +   +   +D L K G  D A    + L +  +VPD  T+  L++T   +G+F
Sbjct: 256 ARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQF 315

Query: 377 SLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
               +L+  +    V+ D+V Y+ L++  CK      A +L   M   G  P+  ++  +
Sbjct: 316 DASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSV 375

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           + GLC + K+DE   VY+ ++ +  + +   ++ I++ L +AG    A++LF      + 
Sbjct: 376 MDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSRE 435

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
             D  +Y++ I  L   G+ EEA  +Y  M+
Sbjct: 436 GPDAAAYSMVITSLCRAGKLEEACGMYHGME 466



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/335 (22%), Positives = 151/335 (45%), Gaps = 8/335 (2%)

Query: 216 FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAG 275
           + P + ++  ++   C+  R+ +AY++L  M+      +V  +T+L++G  R  +  +A 
Sbjct: 84  YTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAR 143

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
            ++++M +NGC PN +TY +LI+    A     A   +    S     D++    ++  L
Sbjct: 144 EVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGL 203

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG------RFSLLPKLVCGLEVE 389
            K    DDAL   + + ++ + P+  T+ +L+      G      RF    K   G  +E
Sbjct: 204 CKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLE 263

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
           A    Y   L   CKAG+ ++A K    +   G  PD  ++  L+     A + D ++ +
Sbjct: 264 A--AAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLEL 321

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
            + +  N    +   ++ +++ L +  +   A +L         P +VV+Y   + GL +
Sbjct: 322 LEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCK 381

Query: 510 GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
            G+ +E + +Y  M      P+  TY +++    K
Sbjct: 382 SGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSK 416



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/404 (22%), Positives = 179/404 (44%), Gaps = 12/404 (2%)

Query: 170 VDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
           V+ G+KV       +  +F +    L + +  S V  +  ++  +G       ++++++ 
Sbjct: 11  VEAGVKV-------DSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDG 63

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
            C  G   +A +L+  +  + T  ++  +  +I G  R  R+  A  + EKMV+    PN
Sbjct: 64  LCGAGMANQALELVRELSGVYTP-TLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPN 122

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
           V TYT L+ G   +    +A      ++  G  P+ + +  LI  LS+ G  D+AL V  
Sbjct: 123 VFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMI 182

Query: 350 GLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAG 406
               L+L  D  T  +++  +C + R     K +  +    V  + V Y+ L+  F + G
Sbjct: 183 EQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHG 242

Query: 407 FPNQAVKLYNT-MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVH 465
             ++ ++ +      KG + +  ++ G L  LC A  +D A    + +  +    +   +
Sbjct: 243 ELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTY 302

Query: 466 TAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKH 525
           + +++    AG+   +++L           DVV+Y+  I  L +  + ++A+ L   M+ 
Sbjct: 303 SMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEA 362

Query: 526 IAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
              PPN  TY  ++   CK   +  V R+ + ++ +R   D  T
Sbjct: 363 AGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVT 406



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 125/247 (50%), Gaps = 7/247 (2%)

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKL 198
           +E  R G +    A    +D L K G +D   K ++E +    +P+ +++++ +    + 
Sbjct: 253 EEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARA 312

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
                  +++  M R G  P+V  +  L+N  CK  +  +A++LL LM   G+  +V  +
Sbjct: 313 GQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTY 372

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
             ++DG  +  ++D    ++E M+++ CSP+VVTY+ ++ G  +A M   A    ++++S
Sbjct: 373 NSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKS 432

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS--YTFCSLLSTVCLSGRF 376
               PD   ++++I  L + G  ++A  +Y G +E+ +  D+       L++ +C + R 
Sbjct: 433 SREGPDAAAYSMVITSLCRAGKLEEACGMYHG-MEVTVAGDNICRALAGLVAALCDAERT 491

Query: 377 SLLPKLV 383
               ++V
Sbjct: 492 DSARRIV 498



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/294 (22%), Positives = 135/294 (45%), Gaps = 9/294 (3%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIA-----L 192
            L+  +EM + G  PN    + ++    + G +D  I+  +E +     S   A     L
Sbjct: 212 ALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYL 271

Query: 193 CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
             LCK   +   +  +  + + G  P+V  + +L+N F + G+   + +LL  M   G  
Sbjct: 272 DALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVK 331

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
             V  ++ LI+   + R+   A  L E M   G  PNVVTY S++ G  ++         
Sbjct: 332 PDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRV 391

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
            +M+     +PD+V ++++++ LSK G  D A+ +++ +   +  PD+  +  +++++C 
Sbjct: 392 YEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCR 451

Query: 373 SGRFSLLPKLVCGLE--VEADLV--VYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
           +G+      +  G+E  V  D +      L++  C A   + A ++     ++G
Sbjct: 452 AGKLEEACGMYHGMEVTVAGDNICRALAGLVAALCDAERTDSARRIVEVASERG 505



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 72/360 (20%), Positives = 148/360 (41%), Gaps = 5/360 (1%)

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           ++  G  +   A+T+L     R  +      L+  +   G      TY  ++ G   A M
Sbjct: 10  VVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGM 69

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
            + A   +  L S  + P L  +N +I  L +     DA  V + ++E  +VP+ +T+  
Sbjct: 70  ANQALELVREL-SGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTI 128

Query: 366 LLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
           LL+ +C S +  L  ++   ++    + + + Y  L+ +  +AG  ++A+++        
Sbjct: 129 LLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLE 188

Query: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI 482
              D  +   ++ GLC A ++D+A+   + +       N   ++ +V    + G   + I
Sbjct: 189 LPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVI 248

Query: 483 QLFRRAIVEKY-PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
           + F      K   L+  +Y   +  L + G  + A     +++   V P+  TY +++ +
Sbjct: 249 RFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINT 308

Query: 542 FCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           F +         LL+D+    ++ D  T   L   + K      A   L  M   G  P+
Sbjct: 309 FARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPN 368



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/227 (20%), Positives = 100/227 (44%), Gaps = 3/227 (1%)

Query: 378 LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
           LL + V    V+ D   +  L +   +    ++ V+L+  +  +G      ++  ++ GL
Sbjct: 5   LLERSVVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGL 64

Query: 438 CGARKIDEAINVYQGIV-MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
           CGA   ++A+ + + +  +  P +   ++  I+  L  A R   A ++  + + E    +
Sbjct: 65  CGAGMANQALELVRELSGVYTPTL--FIYNGIITGLCRASRVMDAYKVLEKMVEESIVPN 122

Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
           V +YT+ + GL    +T+ A  ++ +MK     PN  TY  ++    +   I    R++ 
Sbjct: 123 VFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMI 182

Query: 557 DVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           +     +  D  T   +   + K      A+  + EM  +G+ P+E+
Sbjct: 183 EQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEV 229


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 116/447 (25%), Positives = 199/447 (44%), Gaps = 19/447 (4%)

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNI 190
           Y  V+  F +    G TP+    NI+M+    +  +     VL    K    PN ++ N 
Sbjct: 79  YPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNT 138

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +  LC   ++         +V +GF  N   +  L+N  CK G      +LL  +    
Sbjct: 139 LIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHS 198

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
               V  +  +I    + + L  A  L+ +M+  G SPNVVTY +L+ GF        AF
Sbjct: 199 VKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAF 258

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS-- 368
           S L+ ++ +   PD+   N LID L K G    A  V   +++  + PD  T+ SL+   
Sbjct: 259 SLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGY 318

Query: 369 ---TVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
                  + ++        G  V  ++  Y  ++   CK    ++A+ L+  M  K   P
Sbjct: 319 FFLNKVKNAKYVFYSMAQSG--VTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIP 376

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           D  ++  L+ GLC    ++ AI + + +       + + +T ++D L + GR   A + F
Sbjct: 377 DIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFF 436

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS-FCK 544
           +R +V+ Y L+V +Y V I GL +     EA  L S+M+     P+A T++ ++ + F K
Sbjct: 437 QRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEK 496

Query: 545 ERNIK-------MVKRLLQDVIDARIE 564
           + N K       M+ R LQ+    R++
Sbjct: 497 DENDKAEKILREMIARGLQEARKVRLK 523



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 127/514 (24%), Positives = 224/514 (43%), Gaps = 55/514 (10%)

Query: 130 WRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNF 185
           +RGE+    L   D++   GF  N  +   +++ L K G      ++L++ +     P+ 
Sbjct: 145 FRGEI-KKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDV 203

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLG- 244
           + +N  + +LCK   + +  D+   M+ KG  PNV  +  L+  FC MG + EA+ LL  
Sbjct: 204 VMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNE 263

Query: 245 ---------------LMITLGTSLSVNA-------------------WTVLIDGFRRLRR 270
                          L+  LG    + A                   +  LIDG+  L +
Sbjct: 264 MKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNK 323

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           +  A Y++  M Q+G +PNV TYT++I G  + KM   A S  + ++ +   PD+V +  
Sbjct: 324 VKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTS 383

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA 390
           LID L K    + A+ +   + E  + PD Y++  LL  +C  GR     +    L V+ 
Sbjct: 384 LIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKG 443

Query: 391 ---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
              ++  YN +++  CKA    +A+ L + M  KG  PD  +F  ++  L    + D+A 
Sbjct: 444 YHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAE 503

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            + + ++         +  A   RL EA      + +  +A ++    DVV+Y   + G 
Sbjct: 504 KILREMIARG------LQEARKVRLKEAKI---VLAVMTKACIKP---DVVTYGTLMDGY 551

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
                 + A  ++  M  + V PN   Y +M+   CK++ +     L +++    +  + 
Sbjct: 552 FLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNI 611

Query: 568 HTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            T   L   + K H    A+  L EM   G+ PD
Sbjct: 612 VTYTSLIDALCKNHHLERAIALLKEMKEHGIQPD 645



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/428 (24%), Positives = 178/428 (41%), Gaps = 5/428 (1%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P    FN  L +L        V  +       G  P++    IL+NCFC +  I  A+ +
Sbjct: 61  PPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSV 120

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           L  ++  G   +      LI G      +  A Y  +++V  G   N V+Y +LI G  +
Sbjct: 121 LANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCK 180

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
                     L  LE     PD+V +N +I  L K     DA D+Y  ++   + P+  T
Sbjct: 181 TGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVT 240

Query: 363 FCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           + +L+   C+ G     FSLL ++     +  D+  +N L+    K G    A  +   M
Sbjct: 241 YNALVYGFCIMGHLKEAFSLLNEMKLK-NINPDVCTFNTLIDALGKEGKMKAAKIVLAVM 299

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
           +     PD  ++  L+ G     K+  A  V+  +  +    N   +T ++D L +    
Sbjct: 300 MKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMV 359

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            +A+ LF     +    D+V+YT  I GL +    E A  L  +MK   + P+ Y+Y ++
Sbjct: 360 DEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTIL 419

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGL 598
           L + CK   ++  K   Q ++     L+  T   +   + K      A++   +M   G 
Sbjct: 420 LDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGC 479

Query: 599 IPDEMWRK 606
           +PD +  K
Sbjct: 480 MPDAITFK 487



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 121/490 (24%), Positives = 212/490 (43%), Gaps = 69/490 (14%)

Query: 136 GMVLEAF---DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSF 188
           G + EAF   +EM      P+    N ++D L K G++     VL    K    P+ +++
Sbjct: 252 GHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTY 311

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           N  +     LN V N K V   M + G  PNVR +  +++  CK   + EA  L   M  
Sbjct: 312 NSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKY 371

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
                 +  +T LIDG  +   L+ A  L +KM + G  P+V +YT L+    +      
Sbjct: 372 KNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLEN 431

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF----C 364
           A  F   L  +G+  ++  +NV+I+ L K   + +A+D+   +     +PD+ TF    C
Sbjct: 432 AKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIIC 491

Query: 365 SLLSTVCLSGRFSLLPKLVC-GLE---------------------VEADLVVYNALLSYF 402
           +L           +L +++  GL+                     ++ D+V Y  L+  +
Sbjct: 492 ALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGY 551

Query: 403 CKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN--PAV 460
                   A  ++ +M   G TP+   +  ++ GLC  + +DEA+++++ +   N  P +
Sbjct: 552 FLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNI 611

Query: 461 ------------NAHVHTAI---------------------VDRLIEAGRCHKAIQLFRR 487
                       N H+  AI                     +D L ++GR   A ++F+R
Sbjct: 612 VTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQR 671

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS-FCKER 546
            +V+ Y L+V  YT  I  L + G  +EA  L  +M+     P+A T+ +++ + F K+ 
Sbjct: 672 LLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDE 731

Query: 547 NIKMVKRLLQ 556
           N K  K L +
Sbjct: 732 NDKAEKILXE 741



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/366 (21%), Positives = 142/366 (38%), Gaps = 46/366 (12%)

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
           +++M+     P    +  ++   +  K +    S     ES G  PDL   N+L++C   
Sbjct: 51  FDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCH 110

Query: 338 MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS-------------------- 377
           +     A  V   +L+    P++ T  +L+  +C  G                       
Sbjct: 111 LTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVS 170

Query: 378 -------------------LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
                              LL KL  G  V+ D+V+YN ++   CK      A  LY+ M
Sbjct: 171 YRTLINGLCKTGETKAVARLLRKLE-GHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEM 229

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
           + KG +P+  ++  L+ G C    + EA ++   + + N   +      ++D L + G+ 
Sbjct: 230 IVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKM 289

Query: 479 HKA---IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
             A   + +  +A ++    DVV+Y   I G     + + A  ++  M    V PN  TY
Sbjct: 290 KAAKIVLAVMMKACIKP---DVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTY 346

Query: 536 RVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCN 595
             M+   CKE+ +     L +++    +  D  T   L   + K H    A+    +M  
Sbjct: 347 TTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKE 406

Query: 596 LGLIPD 601
            G+ PD
Sbjct: 407 QGIQPD 412



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/316 (21%), Positives = 138/316 (43%), Gaps = 28/316 (8%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           K++    DV S+  ++  + +  GR E  +     L   G  +  QT+ + +    + ++
Sbjct: 405 KEQGIQPDVYSYTILLDALCK-GGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADL 463

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----------------K 178
           +G  ++   +M   G  P+      ++  LF+    D   K+L                K
Sbjct: 464 FGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLK 523

Query: 179 ETQL-----------PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILL 227
           E ++           P+ +++   +     +N++ + K V   M + G  PNV+ + I++
Sbjct: 524 EAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMI 583

Query: 228 NCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCS 287
           +  CK   + EA  L   M       ++  +T LID   +   L+ A  L ++M ++G  
Sbjct: 584 DGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQ 643

Query: 288 PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
           P+V +YT L+ G  ++     A      L  +G+  ++  +  +I+ L K G +D+ALD+
Sbjct: 644 PDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDL 703

Query: 348 YDGLLELKLVPDSYTF 363
              + +   +PD+ TF
Sbjct: 704 QXKMEDKGCMPDAVTF 719



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 42/194 (21%), Positives = 81/194 (41%), Gaps = 4/194 (2%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           L    +  + +   +A++G     Q + + +    + +     +  F+EM      PN  
Sbjct: 553 LVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIV 612

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
               ++D L K   ++  I +LKE +     P+  S+ I L  LCK   +   K++   +
Sbjct: 613 TYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRL 672

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
           + KG++ NV+++  ++N  CK G   EA  L   M   G       + ++I         
Sbjct: 673 LVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDEN 732

Query: 272 DMAGYLWEKMVQNG 285
           D A  +  +M+  G
Sbjct: 733 DKAEKILXEMIARG 746


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 106/478 (22%), Positives = 206/478 (43%), Gaps = 49/478 (10%)

Query: 134 MYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFN 189
           +YGM       M +FG  P     N ++D   K GRVD  +++L E Q     PN +++N
Sbjct: 202 VYGM-------MEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYN 254

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
           + +  L K  ++   K +I  M+  G   +   +  L+N FC+ G   EA+ L+  M+  
Sbjct: 255 VLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNR 314

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
               +++ +  L+ G  +  ++      +  M+++  +P++V++ SL+ G+      S A
Sbjct: 315 RAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEA 374

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT------- 362
           F   D L+     P ++ +N LI  L   G  D AL +   + +  L PD +T       
Sbjct: 375 FLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNG 434

Query: 363 -------------FCSLLSTVCLSGRFSLLPKLVCGLEVE------------------AD 391
                        F  +LS      RF+   ++V  +++                    D
Sbjct: 435 CFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPD 494

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
           ++ YN  +   C+ G   +A  L   M+  G  PD+ ++  ++ G      + +A  V+ 
Sbjct: 495 VITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFN 554

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
            ++    A +   +T ++           A   F + + +  P +V++Y   I GL    
Sbjct: 555 EMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTR 614

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
           R +EAY  + +M+   + PN ++Y +++   C     +   RL ++++D +I+ D  T
Sbjct: 615 RMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFT 672



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 98/389 (25%), Positives = 180/389 (46%), Gaps = 5/389 (1%)

Query: 175 KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
           K+++   LP+  + N  L  L   N +S  K+V GMM + G  P V  +  +L+ +CK G
Sbjct: 170 KMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEG 229

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
           R+ +A +LL  M   G   +   + VL++G  +   L+ A  L E+M+ +G + +  TY 
Sbjct: 230 RVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYN 289

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
            LI GF +  +F  AF  ++ + +    P L  +N L+  L K          +  +L+ 
Sbjct: 290 PLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKS 349

Query: 355 KLVPDSYTFCSLL----STVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQ 410
           K  PD  +F SLL     T C+S  F L  +L C  ++   ++ YN L+   C  G+ + 
Sbjct: 350 KFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCR-DLVPTVITYNTLIHGLCMWGYLDA 408

Query: 411 AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
           A++L   M D+G  PD +++  L+ G      +  A   +  ++      +   +   + 
Sbjct: 409 ALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIV 468

Query: 471 RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
             ++      A  +    +   +P DV++Y V +  L + G  EEA  L   M    + P
Sbjct: 469 GEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIP 528

Query: 531 NAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           +  TY  ++  F K  +++  + +  +++
Sbjct: 529 DHVTYTSIINGFVKNGHLRKAREVFNEML 557



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 119/506 (23%), Positives = 221/506 (43%), Gaps = 20/506 (3%)

Query: 74  AKQRDYFHDVQSFDHMISVVTRLT--------GRFETVRGIVGELARVGCVIKAQTFLLF 125
           +K ++ +  ++ F    +VVT  T        GR +    ++ E+   GC     T+ + 
Sbjct: 197 SKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVL 256

Query: 126 LR-IYWRGEM---YGMVLEAFDE-MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET 180
           +  +  +GE+    G++ E  +  +    +T N          LF +   DL  +++   
Sbjct: 257 VNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLF-VEAFDLVEEMVNRR 315

Query: 181 QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAY 240
             P   ++N  +  LCK   V+ V+     M++  F P++  F  LL  +C+ G I+EA+
Sbjct: 316 AFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAF 375

Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
            L   +       +V  +  LI G      LD A  L ++M   G  P++ TYT L+ G 
Sbjct: 376 LLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGC 435

Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
            +    S+A  F + + S+G  PD   +N  I    K+     A  + + +L     PD 
Sbjct: 436 FKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDV 495

Query: 361 YTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNT 417
            T+   +  +C  G F     L+  +  +    D V Y ++++ F K G   +A +++N 
Sbjct: 496 ITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNE 555

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           ML KG  P   ++  L+      + +D A   +  ++  +   N   + AI++ L    R
Sbjct: 556 MLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRR 615

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
             +A + F     +    +  SYT+ I      G  EEA  LY +M    + P+++T+ V
Sbjct: 616 MDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSV 675

Query: 538 MLLSFCKE---RNIKMVKRLLQDVID 560
            L +  ++     ++ V+ L+Q+V D
Sbjct: 676 FLKNLHRDYQVHAVQCVESLIQNVED 701



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/401 (22%), Positives = 178/401 (44%), Gaps = 11/401 (2%)

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
           V   M+R G  P+V+    +L        +++A  + G+M   G   +V  +  ++D + 
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
           +  R+D A  L  +M + GC PN VTY  L+ G  +      A   ++ + + G      
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC----LSG---RFSLL 379
            +N LI+   + G + +A D+ + ++  +  P   T+ +L+  +C    ++G   RFS +
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346

Query: 380 PKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
            K     +   D+V +N+LL  +C+ G  ++A  L++ +  +   P   ++  L+ GLC 
Sbjct: 347 LK----SKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCM 402

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
              +D A+ + + +       +   +T +V+   + G    A   F   + +    D  +
Sbjct: 403 WGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFA 462

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           Y   I G ++   T  A+ +  +M     PP+  TY V + + C++ N +    LL++++
Sbjct: 463 YNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMV 522

Query: 560 DARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
              +  D+ T   +     K      A     EM + G+ P
Sbjct: 523 SDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAP 563



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 77/330 (23%), Positives = 135/330 (40%), Gaps = 42/330 (12%)

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           +++KM++NG  P+V     +++   +  + S A +   M+E  G  P +V +N ++D   
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV-----CGLEVEAD 391
           K G  D AL++   + E    P+  T+  L++ +   G       L+      GL V A 
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSA- 285

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
              YN L++ FC+ G   +A  L   M+++   P   ++  L+ GLC   ++        
Sbjct: 286 -YTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQV-------- 336

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
                         T +  R             F   +  K+  D+VS+   + G    G
Sbjct: 337 --------------TGVRLR-------------FSDMLKSKFTPDIVSFNSLLYGYCRTG 369

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSI 571
              EA++L+ ++K   + P   TY  ++   C    +    RL +++ D  +  D  T  
Sbjct: 370 CISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYT 429

Query: 572 RLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            L    FK    S A     EM + GL PD
Sbjct: 430 ILVNGCFKLGYVSMARGFFNEMLSKGLKPD 459


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 123/524 (23%), Positives = 230/524 (43%), Gaps = 39/524 (7%)

Query: 49  APHIVHSTLLNCPSDL-IALSFFIWCAKQRDYFHDVQSFDHMISVVTR------------ 95
           A H++   L+N  +D  + LSFF W   +RD   + +     I+  ++            
Sbjct: 94  ADHLIW-VLMNIKNDYRLVLSFFEWACLRRDPSLEARCIVAQIATASKDLKMARKLIQDF 152

Query: 96  -----LTGRFETVRGIVGELARVGCVIKAQTFLLFL----------RIYWRGEMYGMVLE 140
                L       R +  ++   G +I   +  LF+          +I  +GE    VL+
Sbjct: 153 WVNPNLDVGVSFARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEW---VLK 209

Query: 141 AFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLC 196
             +EM   G  PN +  N V+ +L K G+V    +VL+E       P+ + +   +   C
Sbjct: 210 LIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFC 269

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
           KL +VS+   +   M ++   P+   +  ++   C+ GR+ EA +L   M+         
Sbjct: 270 KLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEV 329

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
            +T LIDG+ +  ++  A  L  +M+Q G +PN+VTYT+L  G  +      A   L  +
Sbjct: 330 TYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEM 389

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG-- 374
             +G   ++  +N L++ L K G+ D A+ +   +      PD+ T+ +L+   C S   
Sbjct: 390 CRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREM 449

Query: 375 -RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
            R   L + +   E++  +V +N L++ FC +G      KL   ML+KG  P+  ++  L
Sbjct: 450 VRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSL 509

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           ++  C    +     +Y+G+       + + +  ++    +A    +A  L R  + + +
Sbjct: 510 IKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGF 569

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
            L V SY   I+G  +  +  EA  L+ QM+   +  +   Y +
Sbjct: 570 NLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNI 613



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/398 (25%), Positives = 179/398 (44%), Gaps = 3/398 (0%)

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
           +I  M  KG  PN   +  ++   CK G++AEA ++L  MI+ G +     +T LIDGF 
Sbjct: 210 LIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFC 269

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
           +L  +  A  L+++M +   SP+ +TYT++I G  +      A      +  +   PD V
Sbjct: 270 KLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEV 329

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV--- 383
            +  LID   K G   +A  +++ +L++ L P+  T+ +L   +C  G      +L+   
Sbjct: 330 TYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEM 389

Query: 384 CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
           C   +E ++  YN+L++  CKAG  +QAVKL   M   GF PD  ++  L+   C +R++
Sbjct: 390 CRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREM 449

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
             A  + + ++             +++    +G      +L +  + +    +  +Y   
Sbjct: 450 VRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSL 509

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           I+             +Y  M    V P+  TY +++   CK RN+K    L +D++    
Sbjct: 510 IKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGF 569

Query: 564 ELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            L   +   L K  +K      A     +M   GL+ D
Sbjct: 570 NLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVAD 607



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/392 (24%), Positives = 182/392 (46%), Gaps = 7/392 (1%)

Query: 174 IKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
           +K+++E Q+    PN  ++N  +  LCK   V+  + V+  M+ +G  P+  ++  L++ 
Sbjct: 208 LKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDG 267

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
           FCK+G ++ AY+L   M     S     +T +I G  +  R+  A  L+ +MV     P+
Sbjct: 268 FCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPD 327

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
            VTYT+LI G+ +      AFS  + +   G  P++V +  L D L K G  D A ++  
Sbjct: 328 EVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLH 387

Query: 350 GLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAG 406
            +    L  + YT+ SL++ +C +G      KL+  +EV     D V Y  L+  +CK+ 
Sbjct: 388 EMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSR 447

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
              +A +L   MLD+   P   +F  L+ G C +  +++   + + ++      NA  + 
Sbjct: 448 EMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYN 507

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
           +++ +           +++R    +    D  +Y + I+G  +    +EA+ L+  M   
Sbjct: 508 SLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGK 567

Query: 527 AVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
                  +Y  ++  F K +     + L + +
Sbjct: 568 GFNLTVSSYNALIKGFYKRKKFLEARELFEQM 599



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 175/374 (46%), Gaps = 12/374 (3%)

Query: 239 AYQLLGLMITLGTSLSVNAWTVLI-------DGFRRLRRLDMAGYLWEKMVQNGCSPNVV 291
           A +L   M+  G  +SV++  + I       DG +   + +    L E+M   G  PN  
Sbjct: 165 ARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPY 224

Query: 292 TYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGL 351
           TY  +I    +    + A   L  + SEG APD V +  LID   K+G+   A  ++D +
Sbjct: 225 TYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM 284

Query: 352 LELKLVPDSYTFCSLLSTVCLSGRF----SLLPKLVCGLEVEADLVVYNALLSYFCKAGF 407
            + K+ PD  T+ +++  +C +GR      L  ++VC   +E D V Y AL+  +CK G 
Sbjct: 285 QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCK-RLEPDEVTYTALIDGYCKEGK 343

Query: 408 PNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTA 467
             +A  L+N ML  G TP+  ++  L  GLC   ++D A  +   +      +N + + +
Sbjct: 344 MKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNS 403

Query: 468 IVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIA 527
           +V+ L +AG   +A++L +   V  +  D V+YT  +    +      A+ L  QM    
Sbjct: 404 LVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRE 463

Query: 528 VPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAV 587
           + P   T+ V++  FC    ++  ++LL+ +++  I  +  T   L K     ++  +  
Sbjct: 464 LQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATT 523

Query: 588 NQLVEMCNLGLIPD 601
                MC  G++PD
Sbjct: 524 EIYRGMCAKGVVPD 537



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 109/262 (41%), Gaps = 39/262 (14%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNL 195
           E   EM R G   N +  N +++ L K G +D  +K++K+ ++    P+ +++   +   
Sbjct: 384 ELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAY 443

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
           CK  ++    +++  M+ +   P V  F +L+N FC  G + +  +LL  M+  G   + 
Sbjct: 444 CKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNA 503

Query: 256 -----------------------------------NAWTVLIDGFRRLRRLDMAGYLWEK 280
                                              N + +LI G  + R +  A +L   
Sbjct: 504 TTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRD 563

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           MV  G +  V +Y +LIKGF + K F  A    + +  EG   D   +N+  D     G 
Sbjct: 564 MVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGK 623

Query: 341 YDDALDVYDGLLELKLVPDSYT 362
            +  L++ D  +E  LV D  T
Sbjct: 624 MELTLELCDEAIEKCLVGDIQT 645


>gi|414884149|tpg|DAA60163.1| TPA: hypothetical protein ZEAMMB73_830458 [Zea mays]
          Length = 378

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 167/343 (48%), Gaps = 11/343 (3%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           F EM R G  P+    N  MD +FK G V+ G  + ++ +    LP+  S++I +  L K
Sbjct: 12  FKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTK 71

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
                    +   M ++GF  + R +  +++ FCK G++ +AY+ L  M       +V  
Sbjct: 72  AGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKHVPPTVAT 131

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  +IDG  ++ RLD A  L+E+    G   NV+ Y+SLI GF +      A+  L+ + 
Sbjct: 132 YGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMM 191

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
            +G AP++   N L+D L K    ++AL  +  + E+K  P++YT+  L++ +C   +++
Sbjct: 192 KKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYN 251

Query: 378 LLPKLVCGLEVEA-----DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
                V   E++      ++V Y  ++S   K G    A  L+      G  PD  SF  
Sbjct: 252 --KAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITDACSLFERFKANGGIPDAASFNA 309

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
           L+ G+  A +  EA +V++   +    +N     +++D L +A
Sbjct: 310 LIEGMSHANRAIEAYHVFEETRLRGCRINVKACISLLDALNKA 352



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/332 (23%), Positives = 141/332 (42%), Gaps = 48/332 (14%)

Query: 60  CPSDLIALSFFIWC-------AKQRDYFHD---------VQSFDHMISVVTRLTGRFETV 103
           C  DL  L+ ++ C        K R  F D         V+S+  +I  +T+  G+    
Sbjct: 20  CQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTK-AGQARET 78

Query: 104 RGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDV 163
             I   + + G  + A+ +   +  + +        EA +EM      P       ++D 
Sbjct: 79  SSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKHVPPTVATYGSIIDG 138

Query: 164 LFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMF 223
           L KI R+D    + +E +                                KG   NV ++
Sbjct: 139 LAKIDRLDEAYMLFEEAK-------------------------------SKGIELNVIVY 167

Query: 224 EILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQ 283
             L++ F K+GRI EAY +L  M+  G + +V  W  L+D   +   ++ A   ++ M +
Sbjct: 168 SSLIDGFGKVGRIDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKE 227

Query: 284 NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
             CSPN  TY+ LI G    + ++ AF F   ++ +G  P++V +  +I  L+K+G+  D
Sbjct: 228 MKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITD 287

Query: 344 ALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
           A  +++       +PD+ +F +L+  +  + R
Sbjct: 288 ACSLFERFKANGGIPDAASFNALIEGMSHANR 319



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/329 (20%), Positives = 148/329 (44%), Gaps = 32/329 (9%)

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M R+G  P++ +    ++C  K G + +   +   +   G    V ++++LI G  +  +
Sbjct: 15  MNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQ 74

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
                 ++  M Q G + +   Y +++ GF ++     A+  L+ ++ +   P +  +  
Sbjct: 75  ARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKHVPPTVATYGS 134

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA 390
           +ID L+K+   D+A  +++   E K                                +E 
Sbjct: 135 IIDGLAKIDRLDEAYMLFE---EAK-----------------------------SKGIEL 162

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           +++VY++L+  F K G  ++A  +   M+ KG  P+ Y++  L+  L  A +I+EA+  +
Sbjct: 163 NVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICF 222

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
           Q +     + N + ++ +++ L    + +KA   ++    +    +VV+YT  I GL + 
Sbjct: 223 QSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKV 282

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVML 539
           G   +A  L+ + K     P+A ++  ++
Sbjct: 283 GNITDACSLFERFKANGGIPDAASFNALI 311



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 59/282 (20%), Positives = 115/282 (40%), Gaps = 32/282 (11%)

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
           G  PDL   N  +DC+ K G  +    +++ +     +PD  +                 
Sbjct: 19  GCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRS----------------- 61

Query: 380 PKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
                          Y+ L+    KAG   +   +++ M  +GF  D  ++  ++ G C 
Sbjct: 62  ---------------YSILIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCK 106

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
           + K+D+A    + + + +       + +I+D L +  R  +A  LF  A  +   L+V+ 
Sbjct: 107 SGKVDKAYEALEEMKVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIV 166

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           Y+  I G  + GR +EAY++  +M    + PN YT+  ++ +  K   I       Q + 
Sbjct: 167 YSSLIDGFGKVGRIDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMK 226

Query: 560 DARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           + +   + +T   L   + +    + A     EM   GL+P+
Sbjct: 227 EMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPN 268



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/275 (18%), Positives = 125/275 (45%), Gaps = 3/275 (1%)

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           ++++M + GC P++    + +    +A       +  + ++  G  PD+  +++LI  L+
Sbjct: 11  IFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLT 70

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE---ADLV 393
           K G   +   ++  + +     D+  + +++   C SG+     + +  ++V+     + 
Sbjct: 71  KAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKHVPPTVA 130

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            Y +++    K    ++A  L+     KG   +   +  L+ G     +IDEA  + + +
Sbjct: 131 TYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEM 190

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
           +    A N +   +++D L++A   ++A+  F+     K   +  +Y++ I GL    + 
Sbjct: 191 MKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKY 250

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
            +A++ + +M+   + PN  TY  M+    K  NI
Sbjct: 251 NKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNI 285


>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/381 (26%), Positives = 177/381 (46%), Gaps = 6/381 (1%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P FL FN  L +L K      V  +       G  P++    IL+NCFC +  I  A+ +
Sbjct: 60  PTFL-FNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSV 118

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
              ++  G   +      LI G      +  A +  +K+V  G   + V+Y +LI G  +
Sbjct: 119 FANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCK 178

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
           A         L  LE     PDLV +  +I CL K     DA D+Y  ++   + P+ +T
Sbjct: 179 AGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFT 238

Query: 363 FCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           + +L+   C+ G     FSLL ++     +  D+  +N L+    K G  ++A+ L+  M
Sbjct: 239 YTTLIHGFCIMGNLKEAFSLLNEMKLK-NINPDVYTFNILIDALAKEGKIDEAMSLFEEM 297

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
             K   P+  ++  L+ GLC    ++ AI + + +       N + +T ++D L + GR 
Sbjct: 298 KHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRL 357

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
             A Q F+  +V+ Y L+V +Y V I GL + G   +   L S+M+     PNA T++ +
Sbjct: 358 ENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTI 417

Query: 539 LLSFCKERNIKMVKRLLQDVI 559
           + +  ++      ++ L+++I
Sbjct: 418 ICALLEKDENDKAEKFLREMI 438



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/307 (25%), Positives = 147/307 (47%), Gaps = 7/307 (2%)

Query: 269 RRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH 328
           +R      L+++   NG +P++ T + LI  F      + AFS    +   G+ P+ +  
Sbjct: 75  KRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSVFANILKRGYHPNAITL 134

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE- 387
           N LI  L   G    AL  +D ++      D  ++ +L++ +C +G    + +L+  LE 
Sbjct: 135 NTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEG 194

Query: 388 --VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
             V+ DLV+Y  ++   CK      A  LY+ M+ KG +P+ +++  L+ G C    + E
Sbjct: 195 HSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKE 254

Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
           A ++   + + N   + +    ++D L + G+  +A+ LF     +    ++V+YT  I 
Sbjct: 255 AFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLID 314

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
           GL +    E A  L  +MK   + PN Y+Y ++L + CK   ++  K+  Q ++      
Sbjct: 315 GLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVK---- 370

Query: 566 DYHTSIR 572
            YH ++R
Sbjct: 371 GYHLNVR 377



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/367 (24%), Positives = 162/367 (44%), Gaps = 7/367 (1%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV----LKETQLPNFL 186
           + + Y  V+  F +    G TP+    +I+++    +  +     V    LK    PN +
Sbjct: 73  KNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSVFANILKRGYHPNAI 132

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           + N  +  LC   ++         +V +GF  +   +  L+N  CK G      +LL  +
Sbjct: 133 TLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKL 192

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
                   +  +T +I    + + L  A  L+ +M+  G SPNV TYT+LI GF      
Sbjct: 193 EGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNL 252

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
             AFS L+ ++ +   PD+   N+LID L+K G  D+A+ +++ +    + P+  T+ SL
Sbjct: 253 KEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSL 312

Query: 367 LSTVCLSG---RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           +  +C +    R   L K +    ++ ++  Y  LL   CK G    A + +  +L KG+
Sbjct: 313 IDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGY 372

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
             +  ++  ++ GLC A    + +++   +       NA     I+  L+E     KA +
Sbjct: 373 HLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTIICALLEKDENDKAEK 432

Query: 484 LFRRAIV 490
             R  I 
Sbjct: 433 FLREMIA 439



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 121/262 (46%), Gaps = 3/262 (1%)

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALL 399
           DA+  ++ +L ++  P ++ F ++LS++  + R+  +  L    E   +  DL   + L+
Sbjct: 44  DAVASFNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILI 103

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
           + FC       A  ++  +L +G+ P+  +   L++GLC   +I  A++ +  +V     
Sbjct: 104 NCFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQ 163

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
           ++   +  +++ L +AG      +L R+        D+V YT  I  L +     +A  L
Sbjct: 164 LDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDL 223

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK 579
           YS+M    + PN +TY  ++  FC   N+K    LL ++    I  D +T   L   + K
Sbjct: 224 YSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAK 283

Query: 580 FHSSSSAVNQLVEMCNLGLIPD 601
                 A++   EM +  + P+
Sbjct: 284 EGKIDEAMSLFEEMKHKNMFPN 305



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/324 (19%), Positives = 130/324 (40%), Gaps = 32/324 (9%)

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
           + +M+     P    + +++   ++ K +    S     E  G  PDL   ++LI+C   
Sbjct: 49  FNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCH 108

Query: 338 MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNA 397
           +     A  V+  +L+    P++ T  +L+  +C  G                       
Sbjct: 109 LTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIK-------------------- 148

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
                       +A+  ++ ++ +GF  D  S+  L+ GLC A +      + + +  ++
Sbjct: 149 ------------RALHFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHS 196

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAY 517
              +  ++T I+  L +      A  L+   IV+    +V +YT  I G    G  +EA+
Sbjct: 197 VKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAF 256

Query: 518 ILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFI 577
            L ++MK   + P+ YT+ +++ +  KE  I     L +++    +  +  T   L   +
Sbjct: 257 SLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGL 316

Query: 578 FKFHSSSSAVNQLVEMCNLGLIPD 601
            K H    A+    +M   G+ P+
Sbjct: 317 CKNHHLERAIALCKKMKEQGIQPN 340


>gi|302792409|ref|XP_002977970.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
 gi|300153991|gb|EFJ20627.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
          Length = 695

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 128/518 (24%), Positives = 217/518 (41%), Gaps = 34/518 (6%)

Query: 149 GFTPNTFARNIVMDVLFKIG---RVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVK 205
           G  PN    N ++  L K G     +  +K + +   PN +S+NI +   CK  ++    
Sbjct: 5   GLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQHCAPNVVSYNIIIDGYCKARNIEKAL 64

Query: 206 DVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF 265
             +  M   G  P    +  ++  FCK G +++A  +   M   G    +  + VL+ G 
Sbjct: 65  AFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGL 124

Query: 266 RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL 325
            R R++  A  L+  M   GC P+VVTY ++I G  + K    A   L+ ++ E  +P  
Sbjct: 125 WRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTF 184

Query: 326 VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF--------S 377
           V +  LID L K      A +V++ + E         +  L + +  +G+          
Sbjct: 185 VTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSD 244

Query: 378 LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
           +  K VC  +    LVV    L      G   +A KL   M+ K   PD Y++  L+ GL
Sbjct: 245 MCRKNVCMTDNTYSLVV----LGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILINGL 300

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
           C AR+  EA  ++Q +     +     +  +++ L+   +   A++L    + +    D 
Sbjct: 301 CKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDT 360

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK----MVKR 553
            SY + IRG    G T EAY L+  M    +  N +TY  M++ F K+        + KR
Sbjct: 361 CSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKR 420

Query: 554 LLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD-EMWR------- 605
           +     D     +  T   L   + K      A   L  M + G +P  ++W        
Sbjct: 421 MQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLA 480

Query: 606 KLGLLSD--ETMTPVSLFDGFVPCERRAGNANHLLLNG 641
           + G L D  E    +S  +    C++  G++N +LL+G
Sbjct: 481 RAGRLDDAFELYKEMSRIN----CQQLVGSSN-ILLDG 513



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 117/522 (22%), Positives = 206/522 (39%), Gaps = 84/522 (16%)

Query: 136 GMVLEAFDEMGRFG--FTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFN 189
           GM+ EA   + R      PN  + NI++D   K   ++  +  L+E +     P   +++
Sbjct: 24  GMLAEAESYLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYS 83

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
             + + CK  +VS   DV   M  KG  P++  F +LL+   +  +I EA +L   M + 
Sbjct: 84  SIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSR 143

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           G    V  +  +I G  + ++LD A +L E+M Q   SP  VTYT+LI    +      A
Sbjct: 144 GCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQA 203

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVY--------------------- 348
           +   + +     A     ++VL + L + G   +A  VY                     
Sbjct: 204 YEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMCRKNVCMTDNTYSLVVLG 263

Query: 349 ----DG-----------LLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEA 390
               DG           ++  K+ PD Y +  L++ +C + R     ++   + G  +  
Sbjct: 264 LSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISP 323

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
            +V YN LL           A++L   MLD+G  PD  S+  ++RG C     +EA  ++
Sbjct: 324 TVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLF 383

Query: 451 Q-----GIVMNN----------------------------------PAVNAHVHTAIVDR 471
           Q     GIV+N                                   PA N   +  ++  
Sbjct: 384 QDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISS 443

Query: 472 LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
           L +  +  +A +L      + +   +  + V +  L   GR ++A+ LY +M  I     
Sbjct: 444 LCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQL 503

Query: 532 AYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
             +  ++L    +  ++   K  L+ + D  I  D  T  +L
Sbjct: 504 VGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKL 545



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 94/476 (19%), Positives = 200/476 (42%), Gaps = 14/476 (2%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           TG       +  E+   GC      F + L   WR        E F  M   G  P+   
Sbjct: 92  TGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVT 151

Query: 157 RNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N ++  L K  ++D  +    ++ +E   P F+++   + +LCK   +    +V   M 
Sbjct: 152 YNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMA 211

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
                     + +L N   + G++ EA ++   M      ++ N +++++ G  ++   +
Sbjct: 212 EGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGN 271

Query: 273 M-AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           + A  L  +M+    +P+   Y+ LI G  +A+    A      +   G +P +V +N L
Sbjct: 272 VEAAKLVTEMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTL 331

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG----RFSLLPKLVCGLE 387
           ++ L       DA+++   +L+   +PD+ ++  ++   C +G     + L   ++    
Sbjct: 332 LEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKD-G 390

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTML----DKGFTPDNYSFVGLLRGLCGARKI 443
           +  +   YN ++  F K    + A  L+  M     DK   P+ +++  L+  LC   ++
Sbjct: 391 IVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQV 450

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           +EA  +   +       +  +   ++ RL  AGR   A +L++          V S  + 
Sbjct: 451 EEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNIL 510

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           + G+L  G  +EA     QM    + P+ +TY  +++  C +      ++L+++++
Sbjct: 511 LDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELV 566



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 82/336 (24%), Positives = 156/336 (46%), Gaps = 11/336 (3%)

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M+  G +PN  ++  L++C CK G +AEA   L  M     + +V ++ ++IDG+ + R 
Sbjct: 1   MLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRM-PQHCAPNVVSYNIIIDGYCKARN 59

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           ++ A     +M + G  P    Y+S+++ F +    S A      + ++G  PD+V  NV
Sbjct: 60  IEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNV 119

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE--- 387
           L+  L +     +A +++  +      PD  T+ ++++ +C   ++  L + V  LE   
Sbjct: 120 LLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLC---KWKKLDEAVFLLERMK 176

Query: 388 ---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
              V    V Y  L+ + CK     QA +++  M +        ++  L   L  A K+ 
Sbjct: 177 QEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLV 236

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEA-GRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           EA  VY  +   N  +  + ++ +V  L +  G   +A +L    + +K   D  +Y++ 
Sbjct: 237 EASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSIL 296

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
           I GL +  R  EA  ++ +M+   + P   TY  +L
Sbjct: 297 INGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLL 332



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 140/341 (41%), Gaps = 19/341 (5%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLN 199
           EM      P+ +A +I+++ L K  R     ++ +E +     P  +++N  L  L    
Sbjct: 280 EMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTA 339

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
            + +  ++   M+ +G  P+   + +++  FC  G   EAY L   MI  G  L+   + 
Sbjct: 340 KLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYN 399

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNG-----CSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
            +I GF +      A  L+++M Q+G      +PN+ TY  LI    +      AF  L 
Sbjct: 400 FMIVGFIKDEAWSSAWMLFKRM-QSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLS 458

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL---KLVPDSYTFCSLLSTVC 371
            +  +G  P L    VL+  L++ G  DDA ++Y  +  +   +LV  S     LL  + 
Sbjct: 459 AMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNI---LLDGIL 515

Query: 372 LSGRFSLLP---KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
             G         K +    +  D   Y+ L+   C  G  +QA KL   ++  G  P+N 
Sbjct: 516 RRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDGKRPENQ 575

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
               LL  LC       A   Y  +      V   +H  +V
Sbjct: 576 GLRQLLGALCAQGDFQGAYEFYCWLPSVGVEVTLGMHNTLV 616



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/288 (22%), Positives = 123/288 (42%), Gaps = 11/288 (3%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ--------LPNFLSFNIALC 193
           F +M + G   NT+  N ++    K         + K  Q         PN  ++ I + 
Sbjct: 383 FQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILIS 442

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
           +LCK + V     ++  M  KGF P+++++E+LL+   + GR+ +A++L   M  +    
Sbjct: 443 SLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQ 502

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
            V +  +L+DG  R   +D A    ++M   G  P+  TY  L+ G         A   +
Sbjct: 503 LVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLV 562

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           + L  +G  P+      L+  L   G +  A + Y  L  + +        +L+++ CL+
Sbjct: 563 EELVRDGKRPENQGLRQLLGALCAQGDFQGAYEFYCWLPSVGVEVTLGMHNTLVTSCCLA 622

Query: 374 GRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
            +   L  ++   E   D++V    +  F    F  + VK+Y    D+
Sbjct: 623 RKLDYL-DMIEQREGVPDVIVER--IEKFRAELFREEEVKIYEETRDR 667


>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
 gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
          Length = 676

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/400 (27%), Positives = 182/400 (45%), Gaps = 20/400 (5%)

Query: 75  KQRDYF-HDVQSFDHM-ISVVTR----------LTGRFETVRGIVGELARVGCVIKAQTF 122
           +QR +F H  Q+FD M +    R            GRFE    ++  + R G  + + T 
Sbjct: 160 RQRHHFAHARQAFDGMGVRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATC 219

Query: 123 LLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ- 181
            + +R + R   +  V   F  M   G  PN       +D L K G V     VL+E   
Sbjct: 220 TVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVG 279

Query: 182 ---LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFY-PNVRMFEILLNCFCKMGRIA 237
               PN  +    +  LCK+        +   +V+   Y PNV  + +++  +CK G++A
Sbjct: 280 KGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLA 339

Query: 238 EAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLI 297
            A  LLG M+  G + + N +T LIDG  R    D A  L  KM   G  PN+ TY ++I
Sbjct: 340 RAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAII 399

Query: 298 KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
            GF +      A+  L M  S+G  PD V + +LI    K G    ALD+++ + E    
Sbjct: 400 GGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCH 459

Query: 358 PDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKL 414
           PD  T+ ++++  C   +     +L      + +      Y ++++ +C+ G    A+K+
Sbjct: 460 PDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKV 519

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           +  M+  G  PD  ++  L+ GLC   +++EA  +++ ++
Sbjct: 520 FERMVQHGCLPDPITYGALISGLCKESRLEEARALFETML 559



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 93/385 (24%), Positives = 178/385 (46%), Gaps = 4/385 (1%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+  SF   +   C+         ++  M R+GF  +     +++  FC+ GR  +   L
Sbjct: 179 PDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGL 238

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
            G M+ +G   +V  +T  +DG  +   +  A ++ E+MV  G  PNV T+TSLI G  +
Sbjct: 239 FGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCK 298

Query: 303 AKMFSIAFS-FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
                 AF  FL +++S  + P++  + V+I    K G    A  +   ++E  L P++ 
Sbjct: 299 IGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTN 358

Query: 362 TFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           T+ +L+   C  G F    +L+  +++E    ++  YNA++  FCK G   QA K+    
Sbjct: 359 TYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMA 418

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
             +G  PD  ++  L+   C    I  A++++  +  N+   +   +T I+    +  + 
Sbjct: 419 TSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQM 478

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            ++ QLF + +         +YT  I G    G++  A  ++ +M      P+  TY  +
Sbjct: 479 EQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGAL 538

Query: 539 LLSFCKERNIKMVKRLLQDVIDARI 563
           +   CKE  ++  + L + ++D  +
Sbjct: 539 ISGLCKESRLEEARALFETMLDKHM 563



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 91/393 (23%), Positives = 160/393 (40%), Gaps = 39/393 (9%)

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           G  P+ R F  L+   C+ GR  EA  LL  M   G SL     TV++  F R  R    
Sbjct: 176 GVRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDV 235

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             L+ +MV+ G                                   + P++V +   +D 
Sbjct: 236 PGLFGRMVEMG-----------------------------------NPPNVVNYTAWVDG 260

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG----RFSLLPKLVCGLEVEA 390
           L K G    A  V + ++   L P+ YT  SL+  +C  G     F L  KLV     + 
Sbjct: 261 LCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKP 320

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           ++  Y  ++  +CK G   +A  L   M+++G  P+  ++  L+ G C     D A  + 
Sbjct: 321 NVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELM 380

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
             + +     N + + AI+    + G+  +A ++ R A  +    D V+YT+ I    + 
Sbjct: 381 NKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQ 440

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
           G    A  L++QM   +  P+  TY  ++  +C++R ++  ++L    +   +     T 
Sbjct: 441 GHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTY 500

Query: 571 IRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
             +     +   S+SA+     M   G +PD +
Sbjct: 501 TSMIAGYCRVGKSTSALKVFERMVQHGCLPDPI 533



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 81/412 (19%), Positives = 155/412 (37%), Gaps = 75/412 (18%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GRF  V G+ G +  +G       +  ++    +           +EM   G  PN +  
Sbjct: 230 GRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTH 289

Query: 158 NIVMDVLFKIGRVD----LGIKVLKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
             ++D L KIG  +    L +K++K +   PN  ++ + +   CK   ++  + ++G MV
Sbjct: 290 TSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMV 349

Query: 213 RKGFYPNV-----------------RMFEIL------------------LNCFCKMGRIA 237
            +G  PN                  R FE++                  +  FCK G+I 
Sbjct: 350 EQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQ 409

Query: 238 EAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNV------- 290
           +AY++L +  + G       +T+LI    +   +  A  L+ +M +N C P++       
Sbjct: 410 QAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTII 469

Query: 291 ----------------------------VTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
                                        TYTS+I G+      + A    + +   G  
Sbjct: 470 AMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCL 529

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL 382
           PD + +  LI  L K    ++A  +++ +L+  +VP   T  +L    C   + ++    
Sbjct: 530 PDPITYGALISGLCKESRLEEARALFETMLDKHMVPCDVTCVTLAYEYCRRDKTTIAVSF 589

Query: 383 VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
           + GL+        +AL+         + A      +LDK +  D+ ++   +
Sbjct: 590 LDGLDKRQQAHAADALVRKLSAVDNLDAASLFLKNVLDKHYAVDHATYTSFI 641


>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 511

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 111/433 (25%), Positives = 207/433 (47%), Gaps = 9/433 (2%)

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNI 190
           Y  V+  F +    G TP+    +I+++       + L   V    LK    PN ++ N 
Sbjct: 73  YPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNT 132

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +  LC   ++         +V +GF  +   +  L+N  CK G      +LL  +    
Sbjct: 133 LIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHS 192

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
               V  +  +I+   + + L  A  ++ +M+  G SP+VVTYT+LI GF        AF
Sbjct: 193 VKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAF 252

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
           S L+ ++ +   P++   N+LID LSK G   +A  +   +++  + PD +T+ SL+   
Sbjct: 253 SLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGY 312

Query: 371 CLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
            L         +   +    V  D+  Y  +++  CK    ++A+ L+  M  K   PD 
Sbjct: 313 FLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDI 372

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
            ++  L+ GLC    ++ AI + + +       + + +T ++D L ++GR   A ++F+R
Sbjct: 373 VTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQR 432

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS-FCKER 546
            + + Y L+V +YTV I  L + G  +EA  L S+M+     P+A T+ +++ + F K+ 
Sbjct: 433 LLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDE 492

Query: 547 NIKMVKRLLQDVI 559
           N K  +++L+++I
Sbjct: 493 NDK-AEKILREMI 504



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/423 (23%), Positives = 176/423 (41%), Gaps = 5/423 (1%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P    FN  L +L        V  +       G  P++    IL+NCFC    I  A+ +
Sbjct: 55  PPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 114

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
              ++  G   +      LI G      +  A Y  +++V  G   + V+Y +LI G  +
Sbjct: 115 FANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCK 174

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
                     L  LE     PD+V +N +I+ L K     DA DVY  ++   + PD  T
Sbjct: 175 TGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVT 234

Query: 363 FCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           + +L+   C+ G     FSLL ++     +  ++  +N L+    K G   +A  L   M
Sbjct: 235 YTTLIHGFCIMGHLKEAFSLLNEMKLK-NINPNVCTFNILIDALSKEGKMKEAKILLAVM 293

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
           +     PD +++  L+ G     ++  A  V+  +       +   +T +++ L +    
Sbjct: 294 MKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMV 353

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            +A+ LF     +    D+V+Y   I GL +    E A  L  +MK   + P+ Y+Y ++
Sbjct: 354 DEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTIL 413

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGL 598
           L   CK   ++  K + Q ++     L+ H    L   + K      A++   +M + G 
Sbjct: 414 LDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGC 473

Query: 599 IPD 601
           +PD
Sbjct: 474 MPD 476


>gi|308082018|ref|NP_001183846.1| uncharacterized protein LOC100502439 [Zea mays]
 gi|238014984|gb|ACR38527.1| unknown [Zea mays]
 gi|414872746|tpg|DAA51303.1| TPA: hypothetical protein ZEAMMB73_971718 [Zea mays]
          Length = 623

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 102/415 (24%), Positives = 184/415 (44%), Gaps = 8/415 (1%)

Query: 30  QISSPKVCATTHQDFPIILAPHIVHSTLLNCPSDLIA-LSFFIWCAKQRDYFHDVQSFDH 88
           + +SP+    T    P+ ++  +V   L    +D +A   FF+W   Q  Y H   S+D 
Sbjct: 143 RFASPEAIVITMDCCPVRVSARLVSKVLSRFSNDWVAAFGFFMWAGTQEGYCHCADSYDM 202

Query: 89  MISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRF 148
           M+ ++ +   +F+ + G++G++  +G ++   T    +R       +   ++AF +M RF
Sbjct: 203 MVDILGKFK-QFDLMCGLIGQMHEIGGLVSLATMTKVMRRLCGANRWSDAIDAFHKMDRF 261

Query: 149 GFTPNTFARNIVMDVLFK---IGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVK 205
           G   +T A N+++D L K   + R     + LK T  P+  SFN  +   CK   +   +
Sbjct: 262 GVAKDTKAMNVLLDTLCKERSVKRARGAFQALKGTIPPDESSFNTLVHGWCKARMLKEAR 321

Query: 206 DVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF 265
           + +  M R GF P+V  +  L+  +C          +L  M T G + ++  +T+++   
Sbjct: 322 ETMKEMERHGFSPSVTTYTCLIEAYCMEKDFQTVDGILDEMHTKGCTPNIITYTIVMHAL 381

Query: 266 RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL 325
            +  R   A   ++K+ Q+GC+ +   Y  LI     A     A   ++ +   G +P+L
Sbjct: 382 GKAGRTQEALDTFDKVKQDGCALDASFYNCLIYILCRAGRLQDANFVVEEMHRTGISPNL 441

Query: 326 VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCG 385
              N LI         ++AL +   + E    PD  T+  LL   C       L  L+C 
Sbjct: 442 TTFNTLISAACDHSLAENALKLLVQMEEQSCNPDIKTYTPLLKLCCRRKWVKTLLFLICH 501

Query: 386 L---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
           +   ++  D   Y  L+ + C+ G   Q+      M+ KGFTP   +F  +L  L
Sbjct: 502 MFRKDITPDFSTYTLLVCWLCRNGRLTQSCLFLEEMVLKGFTPQQATFDLVLEKL 556



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 94/392 (23%), Positives = 169/392 (43%), Gaps = 49/392 (12%)

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           ++++D+L K  + DL   ++ +      L +  +    +  LC  N  S+  D    M R
Sbjct: 201 DMMVDILGKFKQFDLMCGLIGQMHEIGGLVSLATMTKVMRRLCGANRWSDAIDAFHKMDR 260

Query: 214 KGFYPNVRMFEILLNCFCK---MGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
            G   + +   +LL+  CK   + R   A+Q L   I    S    ++  L+ G+ + R 
Sbjct: 261 FGVAKDTKAMNVLLDTLCKERSVKRARGAFQALKGTIPPDES----SFNTLVHGWCKARM 316

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           L  A    ++M ++G SP+V TYT LI+ +   K F      LD + ++G  P+++ + +
Sbjct: 317 LKEARETMKEMERHGFSPSVTTYTCLIEAYCMEKDFQTVDGILDEMHTKGCTPNIITYTI 376

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE--- 387
           ++  L K G   +ALD +D + +     D+  +  L+  +C +GR      +V  +    
Sbjct: 377 VMHALGKAGRTQEALDTFDKVKQDGCALDASFYNCLIYILCRAGRLQDANFVVEEMHRTG 436

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
           +  +L  +N L+S  C       A+KL   M ++   PD  ++  LL+ LC  RK     
Sbjct: 437 ISPNLTTFNTLISAACDHSLAENALKLLVQMEEQSCNPDIKTYTPLLK-LCCRRKW---- 491

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
                           V T +   LI    CH    +FR+ I      D  +YT+ +  L
Sbjct: 492 ----------------VKTLLF--LI----CH----MFRKDITP----DFSTYTLLVCWL 521

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
              GR  ++ +   +M      P   T+ ++L
Sbjct: 522 CRNGRLTQSCLFLEEMVLKGFTPQQATFDLVL 553



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 69/351 (19%), Positives = 144/351 (41%), Gaps = 4/351 (1%)

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
            +++ +++D   + ++ D+   L  +M + G   ++ T T +++    A  +S A     
Sbjct: 197 ADSYDMMVDILGKFKQFDLMCGLIGQMHEIGGLVSLATMTKVMRRLCGANRWSDAIDAFH 256

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            ++  G A D    NVL+D L K  S   A   +  L +  + PD  +F +L+   C + 
Sbjct: 257 KMDRFGVAKDTKAMNVLLDTLCKERSVKRARGAFQAL-KGTIPPDESSFNTLVHGWCKAR 315

Query: 375 RFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
                 + +  +E       +  Y  L+  +C          + + M  KG TP+  ++ 
Sbjct: 316 MLKEARETMKEMERHGFSPSVTTYTCLIEAYCMEKDFQTVDGILDEMHTKGCTPNIITYT 375

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            ++  L  A +  EA++ +  +  +  A++A  +  ++  L  AGR   A  +       
Sbjct: 376 IVMHALGKAGRTQEALDTFDKVKQDGCALDASFYNCLIYILCRAGRLQDANFVVEEMHRT 435

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
               ++ ++   I    +    E A  L  QM+  +  P+  TY  +L   C+ + +K +
Sbjct: 436 GISPNLTTFNTLISAACDHSLAENALKLLVQMEEQSCNPDIKTYTPLLKLCCRRKWVKTL 495

Query: 552 KRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
             L+  +    I  D+ T   L  ++ +    + +   L EM   G  P +
Sbjct: 496 LFLICHMFRKDITPDFSTYTLLVCWLCRNGRLTQSCLFLEEMVLKGFTPQQ 546



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/212 (21%), Positives = 89/212 (41%), Gaps = 4/212 (1%)

Query: 100 FETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNI 159
           F+TV GI+ E+   GC     T+ + +    +       L+ FD++ + G   +    N 
Sbjct: 352 FQTVDGILDEMHTKGCTPNIITYTIVMHALGKAGRTQEALDTFDKVKQDGCALDASFYNC 411

Query: 160 VMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG 215
           ++ +L + GR+     V++E       PN  +FN  +   C  +   N   ++  M  + 
Sbjct: 412 LIYILCRAGRLQDANFVVEEMHRTGISPNLTTFNTLISAACDHSLAENALKLLVQMEEQS 471

Query: 216 FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAG 275
             P+++ +  LL   C+   +     L+  M     +   + +T+L+    R  RL  + 
Sbjct: 472 CNPDIKTYTPLLKLCCRRKWVKTLLFLICHMFRKDITPDFSTYTLLVCWLCRNGRLTQSC 531

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
              E+MV  G +P   T+  +++      M S
Sbjct: 532 LFLEEMVLKGFTPQQATFDLVLEKLKNMHMLS 563


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 105/437 (24%), Positives = 202/437 (46%), Gaps = 18/437 (4%)

Query: 133 EMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV--DLGI-KVLKETQLPNFLSFN 189
           E  G++L+    M   G  P T   N+V+  L + GR+   LG+ + + +   P+FL++ 
Sbjct: 98  EAMGLLLD----MKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHPPDFLTYT 153

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
             +  L K   + +   V+  MV     P+     +++   C   R+ +A +L+  M+  
Sbjct: 154 KLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHR 213

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMA-GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
           G + +   ++ L+DG  +  RLD A   L  ++ + G +P++VTY+++I G  +A     
Sbjct: 214 GMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRD 273

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A   +D+ E    AP  + +N LI    + G  D+A+ +   +++    PD  T+ +L+S
Sbjct: 274 A---VDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMS 330

Query: 369 TVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
             C  GR    + L  ++V   ++  D+V + +L+   C  G    A++L   +  +G  
Sbjct: 331 AFCKMGRLDDAYELFQQMVAN-KLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCP 389

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           P  Y++  ++ G C + ++ +A  +           N   +  +V     AGR  +A+Q 
Sbjct: 390 PTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQY 449

Query: 485 FRRAIVE--KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
             +   E    P  V  Y + +  L   GRT++A   Y +M      P A T+  ++ + 
Sbjct: 450 LDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFAL 509

Query: 543 CKERNIKMVKRLLQDVI 559
           CK    +    LL+++I
Sbjct: 510 CKAHQPQQAHELLEEMI 526



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 99/405 (24%), Positives = 187/405 (46%), Gaps = 13/405 (3%)

Query: 164 LFKIGRVDLGIKVLKET----QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN 219
           L K GR+   ++VL+E      +P+  +  + + +LC  + V + ++++  M+ +G   N
Sbjct: 159 LSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAAN 218

Query: 220 VRMFEILLNCFCKMGRIAEAYQLL-GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
              +  L++  CK  R+ EA  LL G +   G +  +  ++ +IDG  +  RL  A  ++
Sbjct: 219 AITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIF 278

Query: 279 EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
           E+M    C+P  +TY SLI G+  A     A   L  +  +  APD++ +  L+    KM
Sbjct: 279 EEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKM 335

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVY 395
           G  DDA +++  ++  KL PD  TF SL+  +C  GR     +L+  +        +  Y
Sbjct: 336 GRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTY 395

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
           N ++  +CK+    +A +L      +GF P+  ++  L+ G C A + D+A+     +  
Sbjct: 396 NCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNS 455

Query: 456 NNPAVNAHV--HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
                   V  +  I+D L   GR   A+Q +   I   Y     ++   +  L +  + 
Sbjct: 456 EGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQP 515

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           ++A+ L  +M      P   T   ++ ++C+   I+    L  ++
Sbjct: 516 QQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 560



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/380 (26%), Positives = 171/380 (45%), Gaps = 11/380 (2%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+ +  N  L  LC   D +    +   M   G   +   +  L++  CK   + EA  L
Sbjct: 44  PDPVELNTILAELCDARDTTTAMALFDKMAELGAVNHTTYYN-LIHPLCKARLLDEAMGL 102

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           L  M + G +       V+I G  R  RL  A  ++ +M  +   P+ +TYT L+ G  +
Sbjct: 103 LLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSK 161

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
           A     A   L  + S  H PD     V++  L      DDA ++ + +L   +  ++ T
Sbjct: 162 AGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAIT 221

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGLEVE-----ADLVVYNALLSYFCKAGFPNQAVKLYNT 417
           + +L+  +C   R      L+ G EV       D+V Y+ ++   CKAG    AV ++  
Sbjct: 222 YSALVDGLCKCERLDEAVALLLG-EVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEE 280

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           M      P   ++  L+ G C A  +DEAI +   +V +N A +   +T ++    + GR
Sbjct: 281 M---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGR 337

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
              A +LF++ +  K   DVV++T  + GL   GR E+A  L  ++     PP  YTY  
Sbjct: 338 LDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNC 397

Query: 538 MLLSFCKERNIKMVKRLLQD 557
           ++  +CK   ++  + L+ D
Sbjct: 398 VVDGYCKSNQVRKAEELVAD 417



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/392 (24%), Positives = 167/392 (42%), Gaps = 34/392 (8%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGE-MYGMVLEAFDEMGRFGFTPNT 154
           L  R +  R +V E+   G    A T+   +    + E +   V     E+ R GFTP+ 
Sbjct: 196 LGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDI 255

Query: 155 FARNIVMDVLFKIGRVDLGIKVLKETQ-LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
              + V+D L K GR+   + + +E    P  +++N  +   C+  D+     ++G MV 
Sbjct: 256 VTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVD 315

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
               P+V  +  L++ FCKMGR+ +AY+L   M+    S  V  +T L+DG     R++ 
Sbjct: 316 DNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMED 375

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L E++ + GC P + TY  ++ G+ ++     A   +    S G  P+ V +N+L+ 
Sbjct: 376 ALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVA 435

Query: 334 CLSKMGSYDDALDVYDGL-LELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADL 392
              + G  D AL   D L  E    P S                               +
Sbjct: 436 GCCRAGRTDQALQYLDQLNSEGGPCPTS-------------------------------V 464

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
            +Y  +L   C+ G  + AV+ Y  M+ +G+ P   +F  ++  LC A +  +A  + + 
Sbjct: 465 AMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEE 524

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           ++            A+V     AG   KA +L
Sbjct: 525 MIKYGHTPGPGTCDAVVSAYCRAGMIQKADEL 556



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 94/408 (23%), Positives = 177/408 (43%), Gaps = 42/408 (10%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
           FD+M   G   +T   N++   L K   +D  + +L + +     P  L  N+ +  LC+
Sbjct: 69  FDKMAELGAVNHTTYYNLIHP-LCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCR 127

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              + +   V   M      P+   +  L++   K GR+ +A Q+L  M++         
Sbjct: 128 AGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTT 186

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL-DML 316
            TV++       R+D A  L E+M+  G + N +TY++L+ G  + +    A + L   +
Sbjct: 187 LTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEV 246

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
              G  PD+V ++ +ID L K G   DA+D+++   E+   P + T              
Sbjct: 247 TRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFE---EMSCAPTAIT-------------- 289

Query: 377 SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
                             YN+L+  +C+AG  ++A++L   M+D    PD  ++  L+  
Sbjct: 290 ------------------YNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSA 331

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
            C   ++D+A  ++Q +V N  + +    T++VD L   GR   A++L         P  
Sbjct: 332 FCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPT 391

Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
           + +Y   + G  +  +  +A  L +  +     PN  TY +++   C+
Sbjct: 392 IYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCR 439



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/349 (24%), Positives = 164/349 (46%), Gaps = 9/349 (2%)

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +G  P+      +L   C       A  L   M  LG +++   +  LI    + R LD 
Sbjct: 40  RGLSPDPVELNTILAELCDARDTTTAMALFDKMAELG-AVNHTTYYNLIHPLCKARLLDE 98

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L   M   G +P  + +  +I G   A     A      + ++ H PD + +  L+ 
Sbjct: 99  AMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVH 157

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEA 390
            LSK G   DA+ V   ++  + VPD+ T   ++ ++CL  R     +LV  +    + A
Sbjct: 158 GLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAA 217

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLY-NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
           + + Y+AL+   CK    ++AV L    +  +GFTPD  ++  ++ GLC A ++ +A+++
Sbjct: 218 NAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDI 277

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
           ++ +   + A  A  + +++     AG   +AI+L  + + +    DV++YT  +    +
Sbjct: 278 FEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCK 334

Query: 510 GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
            GR ++AY L+ QM    + P+  T+  ++   C E  ++    LL+++
Sbjct: 335 MGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEI 383



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 93/375 (24%), Positives = 163/375 (43%), Gaps = 59/375 (15%)

Query: 269 RRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH 328
           R    A  L++KM + G + N  TY +LI    +A++   A   L  ++S G  P  + H
Sbjct: 60  RDTTTAMALFDKMAELG-AVNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLH 118

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV 388
           NV+I  L + G    AL VY      + + D++                           
Sbjct: 119 NVVIGGLCRAGRLRHALGVY------RQMNDAHP-------------------------- 146

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
             D + Y  L+    KAG    AV++   M+     PDN +   +++ LC   ++D+A  
Sbjct: 147 -PDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARE 205

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK-YPLDVVSYTVAIRGL 507
           + + ++    A NA  ++A+VD L +  R  +A+ L    +  + +  D+V+Y+  I GL
Sbjct: 206 LVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGL 265

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
            + GR  +A  ++ +M   +  P A TY  ++  +C+  ++    RLL  ++D     D 
Sbjct: 266 CKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDV 322

Query: 568 HTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD--EMWRKL--GLLSDETMTPVSLFDG 623
              I  T  +  F             C +G + D  E+++++    LS + +T  SL DG
Sbjct: 323 ---ITYTTLMSAF-------------CKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDG 366

Query: 624 FVPCERRAGNANHLL 638
               E R  +A  LL
Sbjct: 367 LCG-EGRMEDALELL 380



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 87/355 (24%), Positives = 143/355 (40%), Gaps = 53/355 (14%)

Query: 281 MVQNGCSPNVVTYTSLIKGF-MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
           M+  G   +  T+  +++G    AK+  +    LD +   G +PD V  N ++  L    
Sbjct: 1   MLDAGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDAR 60

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALL 399
               A+ ++D + EL  V                                 +   Y  L+
Sbjct: 61  DTTTAMALFDKMAELGAV---------------------------------NHTTYYNLI 87

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
              CKA   ++A+ L   M  +G  P       ++ GLC A ++  A+ VY+ +   +P 
Sbjct: 88  HPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHPP 147

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            +   +T +V  L +AGR   A+Q+ +  +  ++  D  + TV ++ L  G R ++A  L
Sbjct: 148 -DFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDAREL 206

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCK-ERNIKMVKRLLQDVIDARIELD---YHTSI---- 571
             +M H  +  NA TY  ++   CK ER  + V  LL +V       D   Y T I    
Sbjct: 207 VEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLC 266

Query: 572 ---RLTKFIFKFHSSSSA-----VNQLV-EMCNLGLIPDEMWRKLGLLSDETMTP 617
              RL   +  F   S A      N L+   C  G + DE  R LG + D+   P
Sbjct: 267 KAGRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDM-DEAIRLLGKMVDDNCAP 320


>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
 gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
          Length = 658

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 112/450 (24%), Positives = 206/450 (45%), Gaps = 43/450 (9%)

Query: 128 IYWRG-EMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQL 182
           +Y RG E Y  V+ +   M     +PN  + N+V+  L K+G VD  I+V +    +  L
Sbjct: 163 LYHRGLEFYDYVVNSNMNMN---ISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCL 219

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+  ++   +  LCK   +     ++  M  +G  P+  ++ +L++  CK G ++   +L
Sbjct: 220 PDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKL 279

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           +  M   G   +   +  LI G     +LD A  L E+MV + C PN VTY +LI G ++
Sbjct: 280 VDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVK 339

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
            +        L  +E  G+  +   ++VLI  L K G  ++A+ ++  + E    P    
Sbjct: 340 QRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRP---- 395

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
                                       ++VVY+A++   C+ G PN+A ++ N M+  G
Sbjct: 396 ----------------------------NIVVYSAVIDGLCREGKPNEAKEILNGMISSG 427

Query: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI 482
             P+ Y++  L++G       +EAI V++ +     + N   ++ ++D L   GR  +A+
Sbjct: 428 CLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAM 487

Query: 483 QLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP---PNAYTYRVML 539
            ++ + +      D V+Y+  I+GL   G  + A  LY +M     P   P+  TY ++L
Sbjct: 488 MVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILL 547

Query: 540 LSFCKERNIKMVKRLLQDVIDARIELDYHT 569
              C ++++     LL  ++D   + D  T
Sbjct: 548 DGLCMQKDVSRAVDLLNCMLDRGCDPDVIT 577



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 115/511 (22%), Positives = 221/511 (43%), Gaps = 34/511 (6%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEM-GRFGFTPNTFA 156
           G F +V  ++  +     VI  ++F++  R Y +  +    ++ F  M   F    +  +
Sbjct: 91  GDFASVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPEKAVDLFHRMVDEFRCKRSVKS 150

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
            N V++V+   G    G++        N ++ NI+                         
Sbjct: 151 FNSVLNVIINEGLYHRGLEFYDYVVNSN-MNMNIS------------------------- 184

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
            PN   F +++   CK+G +  A ++   M           +  L+DG  +  R+D A  
Sbjct: 185 -PNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVL 243

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           L ++M   GCSP+ V Y  LI G  +    S     +D +  +G  P+ V +N LI  L 
Sbjct: 244 LLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLC 303

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLV 393
             G  D A+ + + ++  K +P+  T+ +L++ +    R     +L+  +E      +  
Sbjct: 304 LKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQH 363

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
           +Y+ L+S   K G   +A+ L+  M +KG  P+   +  ++ GLC   K +EA  +  G+
Sbjct: 364 IYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGM 423

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
           + +    N + +++++    + G   +AIQ++R         +   Y+V I GL   GR 
Sbjct: 424 ISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRV 483

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI---DARIELDYHTS 570
           +EA +++S+M  I + P+   Y  M+   C   ++    +L  +++   + + + D  T 
Sbjct: 484 KEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTY 543

Query: 571 IRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
             L   +      S AV+ L  M + G  PD
Sbjct: 544 NILLDGLCMQKDVSRAVDLLNCMLDRGCDPD 574



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/381 (24%), Positives = 174/381 (45%), Gaps = 8/381 (2%)

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN-GCSP 288
           +  +G  A   +LL  +      +   ++ V+   + +    + A  L+ +MV    C  
Sbjct: 87  YANLGDFASVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPEKAVDLFHRMVDEFRCKR 146

Query: 289 NVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH----APDLVFHNVLIDCLSKMGSYDDA 344
           +V ++ S++   +   ++     F D + +       +P+ +  N++I  L K+G  D A
Sbjct: 147 SVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLGFVDRA 206

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSY 401
           ++V+ G+ E K +PD YT+C+L+  +C   R      L+  ++ E      V+YN L+  
Sbjct: 207 IEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDG 266

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVN 461
            CK G  ++  KL + M  KG  P+  ++  L+ GLC   K+D+A+++ + +V +    N
Sbjct: 267 LCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPN 326

Query: 462 AHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYS 521
              +  +++ L++  R     +L        Y L+   Y+V I GL + G+ EEA  L+ 
Sbjct: 327 DVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWK 386

Query: 522 QMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFH 581
           +M      PN   Y  ++   C+E      K +L  +I +    + +T   L K  FK  
Sbjct: 387 KMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTG 446

Query: 582 SSSSAVNQLVEMCNLGLIPDE 602
            S  A+    EM   G   +E
Sbjct: 447 LSEEAIQVWREMDETGCSRNE 467



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 94/368 (25%), Positives = 160/368 (43%), Gaps = 34/368 (9%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLR--IYWRGEMYGMVLEAFDEMGRFGFTPN 153
           L G+ +    ++  +    C+    T+   +   +  R  M G  L     M   G+  N
Sbjct: 304 LKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARL--LISMEERGYRLN 361

Query: 154 TFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIG 209
               ++++  LFK G+ +  + + K+       PN + ++  +  LC+    +  K+++ 
Sbjct: 362 QHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILN 421

Query: 210 MMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLR 269
            M+  G  PNV  +  L+  F K G   EA Q+   M   G S +   ++VLIDG   + 
Sbjct: 422 GMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVG 481

Query: 270 RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS-FLDML--ESEGHAPDLV 326
           R+  A  +W KM+  G  P+ V Y+S+IKG         A   + +ML  E     PD+V
Sbjct: 482 RVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVV 541

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV------CLSGRFSLLP 380
            +N+L+D L        A+D+ + +L+    PD  T  + L+T+      C  GR S L 
Sbjct: 542 TYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKSDSCEEGR-SFLE 600

Query: 381 KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
           +LV  L                 K    + A K+   ML K   P   ++  ++  +C  
Sbjct: 601 ELVARL----------------LKRQRVSGACKIVEVMLGKYLAPKTSTWAMIVPEICKP 644

Query: 441 RKIDEAIN 448
           +KI+ AIN
Sbjct: 645 KKINAAIN 652


>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
 gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 119/488 (24%), Positives = 219/488 (44%), Gaps = 29/488 (5%)

Query: 86  FDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEM 145
            D  + +   +  R+E   G   ++     VI A           + +      E F  M
Sbjct: 196 IDEALELFDDMEKRYEASHGCEPDVISYSTVIDA---------LCKAQRVDKAYEYFKRM 246

Query: 146 GRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL---KETQLP-NFLSFNIALCNLCKLNDV 201
              G  PN    + ++D L K+ R    +++L   KE     N + FN  L  L K ++ 
Sbjct: 247 RAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQ 306

Query: 202 SNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVL 261
                    +++ G  PNV  + + ++  CK GR+ EAY++L  M+    +  V  ++ +
Sbjct: 307 EKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSI 366

Query: 262 IDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH 321
           IDGF +  R+D A  ++ +M+ + C P+ VT+ +L+ GF E K    AF   + + + G 
Sbjct: 367 IDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGF 426

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPK 381
            P L  +NVL+DC+    S + AL++Y  +   K  PD  T+  L+  +C + R     +
Sbjct: 427 IPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKE 486

Query: 382 LVCGLEV-EADLVVYN-----ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
               L+V EAD VV N     AL+   CK G  ++A  + + +++ G  P   +F  L+ 
Sbjct: 487 F---LDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVE 543

Query: 436 GLCGARKIDEAINVYQGIVMNNPA--VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
            L   +K + A       ++ +P    +A  ++  V  + +AG+  +A+++  + +++  
Sbjct: 544 ELYLRKKWEAASK-----LLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGV 598

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
             D  +Y   +R L    R E A   + +M      P   TY +++   C         R
Sbjct: 599 RPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFR 658

Query: 554 LLQDVIDA 561
           + + ++ A
Sbjct: 659 IFEAMVAA 666



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 123/578 (21%), Positives = 228/578 (39%), Gaps = 79/578 (13%)

Query: 44  FPIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETV 103
           +   + P +    L       +A +FF W   +  + H+  +   +++   +     E  
Sbjct: 37  YASTVTPEVAGRVLQQVEDPDVAWTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAH 96

Query: 104 RGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDV 163
           R +  EL  + C      +   +  + +        E  DEM   G   +    + ++  
Sbjct: 97  RLLKEELEPL-CFPNEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQG 155

Query: 164 LFKIGRVDLGIKVLK---ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK-----G 215
           L + GR+D  ++  K   E   PN +++N  +  LCK N +    ++   M ++     G
Sbjct: 156 LCRKGRIDEALEQFKSMGEECSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHG 215

Query: 216 FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAG 275
             P+V  +  +++  CK  R+ +AY+    M  +G + +V  ++ LIDG  ++ R     
Sbjct: 216 CEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECL 275

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
            L   M + G   N++ + +++    +      A  F + L   G  P++V +NV +  L
Sbjct: 276 ELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGL 335

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-------------------- 375
            K G  D+A  +   ++E K+ PD  T+ S++   C +GR                    
Sbjct: 336 CKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHP 395

Query: 376 ---------FSLLPKLVCGLEVEADLV---------VYNALLSYFCKAGFPNQAVKLYNT 417
                    FS   K      V  D+V          YN L+   C A     A+++Y+ 
Sbjct: 396 VTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHK 455

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           M  K   PD  ++  L++ LC AR++DEA      +  +N   N  +  A+V+ L + G 
Sbjct: 456 MKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGE 515

Query: 478 ---------------CHKAIQLFRRAIVEKY--------------P---LDVVSYTVAIR 505
                          C    + F+  + E Y              P    D  +Y++ + 
Sbjct: 516 VDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRSPGFVADAATYSLCVA 575

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
            + + G+ +EA  +  QM    V P+  TY  +L S C
Sbjct: 576 EICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLC 613



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/461 (23%), Positives = 206/461 (44%), Gaps = 40/461 (8%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVI 208
           GF  N +   ++++   K  R +   ++LKE   P           LC            
Sbjct: 71  GFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEP-----------LC------------ 107

Query: 209 GMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRL 268
                   +PN  M+  ++N FCK G++ +A++LL  M   G  + V   + LI G  R 
Sbjct: 108 --------FPNEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRK 159

Query: 269 RRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE-----SEGHAP 323
            R+D A   ++ M +  CSPNV+TY +++ G  +A     A    D +E     S G  P
Sbjct: 160 GRIDEALEQFKSMGEE-CSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEP 218

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV 383
           D++ ++ +ID L K    D A + +  +  +   P+  T+ SL+  +C   R S   +L+
Sbjct: 219 DVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELL 278

Query: 384 CGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
             ++ +    +++ +NA+L    K     +A + +  +L  G  P+  ++   + GLC A
Sbjct: 279 LHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKA 338

Query: 441 RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSY 500
            ++DEA  +   +V +    +   +++I+D   +AGR  KA  +F R +V +     V++
Sbjct: 339 GRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTF 398

Query: 501 TVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
              + G  E  ++ EA+ ++  M +    P   TY V++   C   +++    +   +  
Sbjct: 399 MTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKR 458

Query: 561 ARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            + + D +T   L + + +      A   L  M    ++P+
Sbjct: 459 KKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPN 499



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 120/529 (22%), Positives = 214/529 (40%), Gaps = 66/529 (12%)

Query: 14  QRTQILKTIISFKSIHQISSPKV----------CATTHQDFPIILAPHIV--HSTLLNCP 61
           ++ +I + +  FKS+ +  SP V          C     D  + L   +   +     C 
Sbjct: 158 RKGRIDEALEQFKSMGEECSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCE 217

Query: 62  SDLIALSFFI--WCAKQR-----DYFHDVQSFDHMISVVTRLT--------GRFETVRGI 106
            D+I+ S  I   C  QR     +YF  +++     +VVT  +         R      +
Sbjct: 218 PDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLEL 277

Query: 107 VGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK 166
           +  +   G  I    F   L   W+ +      + F+ + + G  PN    N+ +  L K
Sbjct: 278 LLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCK 337

Query: 167 IGRVDLGIKVLKE----TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
            GRVD   ++L E       P+ ++++  +   CK   +    DV   M+     P+   
Sbjct: 338 AGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVT 397

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           F  LL+ F +  +  EA+++   M+  G    +  + VL+D       ++ A  ++ KM 
Sbjct: 398 FMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMK 457

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
           +    P+  TY  LI+    A+    A  FLD++E++   P+    + L++ L K G  D
Sbjct: 458 RKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVD 517

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYF 402
           +A  V D ++E+   P   TF  L+  + L  ++    KL+      AD   Y+  ++  
Sbjct: 518 EACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRSPGFVADAATYSLCVAEI 577

Query: 403 CKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI------------------- 443
           CKAG P++AV++   M+ KG  PD  ++V +LR LCG  ++                   
Sbjct: 578 CKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGL 637

Query: 444 ----------------DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
                           DEA  +++ +V       A     +   L +AG
Sbjct: 638 VTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAG 686



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/334 (18%), Positives = 127/334 (38%), Gaps = 37/334 (11%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV ++  +I    +  GR +    +   +    C+    TF+  L  +   +        
Sbjct: 359 DVITYSSIIDGFCK-AGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRV 417

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCK 197
            ++M   GF P     N++MD +     V+  +    K+ ++ + P+  ++   +  LC+
Sbjct: 418 HEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCR 477

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              V   K+ + +M      PN  +   L+   CK G + EA  +L  ++ +G       
Sbjct: 478 ARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGET 537

Query: 258 WTVLIDGFRRLRRLDMAGYLW--------------------------------EKMVQNG 285
           + +L++     ++ + A  L                                 E+MV  G
Sbjct: 538 FKILVEELYLRKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKG 597

Query: 286 CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL 345
             P+  TY ++++          A +  + + S G AP LV + +LI         D+A 
Sbjct: 598 VRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAF 657

Query: 346 DVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
            +++ ++     P + T  +L S +  +G   LL
Sbjct: 658 RIFEAMVAAGFTPQAQTMRTLSSCLRDAGYQDLL 691


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 119/509 (23%), Positives = 224/509 (44%), Gaps = 39/509 (7%)

Query: 100 FETVRGIVGELARVGCVIKAQTFLLFLRI---YWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
            + V   V +  R+ C+      + F +I   + + + Y   +     +   G  P+   
Sbjct: 37  IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLIT 96

Query: 157 RNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            NI+++    +G++  G     K+LK    P+ ++ N  +  LC    V         ++
Sbjct: 97  LNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLL 156

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
            +GF  N   +  L+N  CK+G    A +LL  +    T  +V  ++ +ID   + + + 
Sbjct: 157 AQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVS 216

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A  L+ +M   G S +VVTY++LI GF        A   L+ +  +   P++  +N+L+
Sbjct: 217 EAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILV 276

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADL 392
           D L K G   +A  V   +L+  + PD  T+ +L     + G F                
Sbjct: 277 DALCKEGKVKEAKSVLAVMLKACVKPDVITYSTL-----MDGYF---------------- 315

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           +VY              +A  ++N M   G TPD +++  L+ G C  + +DEA+N+++ 
Sbjct: 316 LVYEV-----------KKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKE 364

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           +   N       +++++D L ++GR      L         P +V++Y+  I GL + G 
Sbjct: 365 MHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGH 424

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
            + A  L+++MK   + PN +T+ ++L   CK   +K  + + QD++     L+ +T   
Sbjct: 425 LDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNV 484

Query: 573 LTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           +     K      A+  L +M + G IPD
Sbjct: 485 MIDGHCKQGLLEEALTMLSKMEDNGCIPD 513



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 110/445 (24%), Positives = 201/445 (45%), Gaps = 15/445 (3%)

Query: 147 RFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVS 202
           + G+ P+T   N ++  L   G+V   +    K+L +    N +S+   +  +CK+ D  
Sbjct: 122 KRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTR 181

Query: 203 NVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLI 262
               ++  +  +   PNV M+  +++  CK   ++EAY L   M   G S  V  ++ LI
Sbjct: 182 AAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLI 241

Query: 263 DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
            GF    +L  A  L  +MV    +PNV TY  L+    +      A S L ++      
Sbjct: 242 YGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVK 301

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL 382
           PD++ ++ L+D    +     A  V++ +  + + PD +T+  L++  C +        L
Sbjct: 302 PDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNL 361

Query: 383 VCGLEVE---ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
              +  +     +V Y++L+   CK+G       L + M D+G   +  ++  L+ GLC 
Sbjct: 362 FKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCK 421

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
              +D AI ++  +       N    T ++D L + GR   A ++F+  + + Y L+V +
Sbjct: 422 NGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYT 481

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS-FCKERNIKMVKRLLQDV 558
           Y V I G  + G  EEA  + S+M+     P+A T+ +++++ F K+ N   V       
Sbjct: 482 YNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFKKDENGGNVG------ 535

Query: 559 IDARI-ELDYHTSIRLTKFIFKFHS 582
            D ++ E+  H         FK HS
Sbjct: 536 FDKKVWEIVEHKKGETPSITFKCHS 560



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 97/392 (24%), Positives = 184/392 (46%), Gaps = 22/392 (5%)

Query: 61  PSDLIALSFFI--WC----AKQRDYFHD---VQSFD-HMISVVTRLTG--RFETVRGIVG 108
           P D + L+  I   C     K+  +FHD    Q F  + +S  T + G  +    R  + 
Sbjct: 126 PPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIK 185

Query: 109 ELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA---FDEMGRFGFTPNTFARNIVMDVLF 165
            L ++   +     +++  I      Y +V EA   F EM   G + +    + ++    
Sbjct: 186 LLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFC 245

Query: 166 KIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
             G++   I +L E  L    PN  ++NI +  LCK   V   K V+ +M++    P+V 
Sbjct: 246 IEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVI 305

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            +  L++ +  +  + +A  +   M  +G +  V+ +T+LI+GF + + +D A  L+++M
Sbjct: 306 TYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEM 365

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
            Q    P +VTY+SLI G  ++      +  +D +   G   +++ ++ LID L K G  
Sbjct: 366 HQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHL 425

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNAL 398
           D A+ +++ + +  + P+++TF  LL  +C  GR     ++   L  +    ++  YN +
Sbjct: 426 DRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVM 485

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           +   CK G   +A+ + + M D G  PD  +F
Sbjct: 486 IDGHCKQGLLEEALTMLSKMEDNGCIPDAVTF 517



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 119/279 (42%), Gaps = 34/279 (12%)

Query: 214  KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            KG  P++    IL+NCFC MG+I   + +L  ++  G       +T LI+G     +++ 
Sbjct: 955  KGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNK 1014

Query: 274  AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
            A +  +K++  G   N V+Y +LI G  +      A   L  ++     PD+V +N +ID
Sbjct: 1015 ALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIID 1074

Query: 334  CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLV 393
             L K                 +LV  +Y    L   + + G             + AD+V
Sbjct: 1075 ALCKH----------------QLVSKAY---GLFFEMNVKG-------------ISADVV 1102

Query: 394  VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC--GARKIDEAINVYQ 451
             YN L+  FC  G   +A+ L N M+ K   P+  ++  L+  LC  G   +DE++++  
Sbjct: 1103 TYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLS 1162

Query: 452  GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             +  N    NA     I+  L E     K  +L    I 
Sbjct: 1163 KMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIA 1201



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 113/261 (43%), Gaps = 5/261 (1%)

Query: 268  LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
            ++    A  L  ++   G  P++ T   LI  F      +  FS L  +   G+ PD + 
Sbjct: 939  MKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTIT 998

Query: 328  HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VC 384
               LI+ L   G  + AL  +D LL      +  ++ +L++ VC  G      KL   + 
Sbjct: 999  FTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKID 1058

Query: 385  GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
            G   + D+V+YN ++   CK    ++A  L+  M  KG + D  ++  L+ G C   K+ 
Sbjct: 1059 GRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLK 1118

Query: 445  EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR--CHKAIQLFRRAIVEKYPLDVVSYTV 502
            EAI +   +V+     N   +  +VD L + G+    +++ +  +        + V++ +
Sbjct: 1119 EAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEI 1178

Query: 503  AIRGLLEGGRTEEAYILYSQM 523
             I  L E    ++   L  +M
Sbjct: 1179 IISALFEKDENDKVEKLLHEM 1199



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 102/242 (42%), Gaps = 32/242 (13%)

Query: 304  KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
            K +S A S    LE +G  PDL   N+LI+C   MG       +   +L+    PD+ TF
Sbjct: 940  KHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITF 999

Query: 364  CSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
             +L++ +                                C  G  N+A+  ++ +L +GF
Sbjct: 1000 TTLINGL--------------------------------CLKGQVNKALHFHDKLLAQGF 1027

Query: 424  TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
              +  S+  L+ G+C       AI + + I       +  ++  I+D L +     KA  
Sbjct: 1028 QLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYG 1087

Query: 484  LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
            LF    V+    DVV+Y   I G    G+ +EA  L ++M    + PN  TY +++ + C
Sbjct: 1088 LFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALC 1147

Query: 544  KE 545
            KE
Sbjct: 1148 KE 1149



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 50/247 (20%), Positives = 116/247 (46%), Gaps = 7/247 (2%)

Query: 183  PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
            P+  + NI +   C +  ++    ++  ++++G++P+   F  L+N  C  G++ +A   
Sbjct: 959  PDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHF 1018

Query: 243  LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
               ++  G  L+  ++  LI+G  ++     A  L  K+      P+VV Y ++I    +
Sbjct: 1019 HDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCK 1078

Query: 303  AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
             ++ S A+     +  +G + D+V +N LI     +G   +A+ + + ++   + P+  T
Sbjct: 1079 HQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRT 1138

Query: 363  FCSLLSTVCLSGR------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYN 416
            +  L+  +C  G+       S+L K+      +A+ V +  ++S   +    ++  KL +
Sbjct: 1139 YNILVDALCKEGKDLLDESLSMLSKMEDN-GCKANAVTFEIIISALFEKDENDKVEKLLH 1197

Query: 417  TMLDKGF 423
             M+ +G 
Sbjct: 1198 EMIARGL 1204



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 6/228 (2%)

Query: 149  GFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNV 204
            G  P+ F  NI+++    +G++        K+LK    P+ ++F   +  LC    V+  
Sbjct: 956  GIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKA 1015

Query: 205  KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
                  ++ +GF  N   +  L+N  CK+G    A +LL  +    T   V  +  +ID 
Sbjct: 1016 LHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDA 1075

Query: 265  FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
              + + +  A  L+ +M   G S +VVTY +LI GF        A   L+ +  +   P+
Sbjct: 1076 LCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPN 1135

Query: 325  LVFHNVLIDCLSKMGS--YDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
            +  +N+L+D L K G    D++L +   + +     ++ TF  ++S +
Sbjct: 1136 VRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISAL 1183



 Score = 46.2 bits (108), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 36/159 (22%), Positives = 64/159 (40%), Gaps = 35/159 (22%)

Query: 388  VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
            ++ DL   N L++ FC  G       +   +L +G+ PD  +F  L+ GLC   ++++A+
Sbjct: 957  IQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKAL 1016

Query: 448  NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
                           H H    D+L+  G                + L+ VSY   I G+
Sbjct: 1017 ---------------HFH----DKLLAQG----------------FQLNQVSYGTLINGV 1041

Query: 508  LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
             + G T  A  L  ++      P+   Y  ++ + CK +
Sbjct: 1042 CKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQ 1080


>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1246

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 117/491 (23%), Positives = 219/491 (44%), Gaps = 11/491 (2%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
           A S+F   ++  ++ H   + ++M+ ++ R   R E +  +   + +        T++  
Sbjct: 114 AFSYFKIVSQLTNFVHTTDACNYMLEIL-REQRRIEDMVFVFDLMQKKVIYRNLTTYMTI 172

Query: 126 LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQ 181
            +        G    A  +M   GF  N ++ N ++ +L   G  +  +KV K    E  
Sbjct: 173 FKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLIHLLLP-GFCNEALKVYKRMISEGM 231

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
            P+  +++  +  L +  D   + +++  M   G  PN+  + I +    +  RI +A+ 
Sbjct: 232 KPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWG 291

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           +   M   G    V  +TVLID      +LD A  L+ KM  +  SP+ VTY +L+  F 
Sbjct: 292 IFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFG 351

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           +         F + +E +G+APD+V + +LI+ L K G  D A D+ D +    + P+ +
Sbjct: 352 KVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLH 411

Query: 362 TF----CSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
           T+    C LL    L     LL  +   L V+     Y   + Y+ K+G P +A+  + T
Sbjct: 412 TYNTMICGLLKARRLDEALELLENME-SLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFET 470

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           M  +G  P   +    L  L    +I EA +++  +     + ++  +  ++    +AG+
Sbjct: 471 MKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQ 530

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
             KA QL    I +    DV+     I  L + GR + A+ ++ ++K++ + P   TY +
Sbjct: 531 IDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNI 590

Query: 538 MLLSFCKERNI 548
           +L    KE  I
Sbjct: 591 LLTGLGKEGKI 601



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 117/514 (22%), Positives = 220/514 (42%), Gaps = 10/514 (1%)

Query: 97   TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
            TGR      I  +L + G    + T+ + ++ Y +        +   EM   G  P+   
Sbjct: 493  TGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMI 552

Query: 157  RNIVMDVLFKIGRVDLGIKV---LKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
             N +++ L+K GRVD   K+   LK  +L P  +++NI L  L K   +    ++ G M 
Sbjct: 553  INSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMT 612

Query: 213  RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
              G  PN   F  LL+C  K   +  A ++   M  +  +  V  +  +I G  R  R+D
Sbjct: 613  ESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRID 672

Query: 273  MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF-LDMLESEGHAPDLVFHNVL 331
             A + + +M +   SP+ VT  +LI G +       A    ++ +       +  F   L
Sbjct: 673  YAFWFFHQM-KKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGEL 731

Query: 332  IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF----SLLPKLVCGLE 387
            ++C+      ++A+   + L+   +  D +    L+  +C   +     ++  K    L 
Sbjct: 732  MECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLG 791

Query: 388  VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
            +   L  YN L+     + F  +A++L+  M   G  P+N+++  LL     +++I++  
Sbjct: 792  IHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLY 851

Query: 448  NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            ++Y  +       NA  H  I+  L+++   +KA+ L+   +   +     +Y   I GL
Sbjct: 852  DLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGL 911

Query: 508  LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
            L+ GR+E+A  ++ +M      PN+  Y +++  F K   I     L + ++   I  D 
Sbjct: 912  LKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDL 971

Query: 568  HTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
             +   L + +        AV    E+   GL PD
Sbjct: 972  KSYTILVECLCITGRIDEAVQYFEELKLTGLDPD 1005



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 110/440 (25%), Positives = 194/440 (44%), Gaps = 30/440 (6%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIG----RVDLGIKVLKETQLPNFLSFNIALC 193
            LE  + M   G  P  F+  + +D   K G     +D    + K   +P+  + N +L 
Sbjct: 429 ALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLY 488

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
            L +   +S  +D+   + + G  P+   + +L+ C+ K G+I +A QLL  MI+ G   
Sbjct: 489 TLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEP 548

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF-MEAKMFSIAFSF 312
            V     LI+   +  R+D A  ++ ++     +P VVTY  L+ G   E K+      F
Sbjct: 549 DVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELF 608

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
             M ES G  P+ +  N L+DCLSK  + D AL ++  +  +   PD  T+ +++  +  
Sbjct: 609 GSMTES-GCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIR 667

Query: 373 SGR-------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
            GR       F  + K      +  D V    L+    + G    A+K+    + +    
Sbjct: 668 EGRIDYAFWFFHQMKKF-----LSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQ 722

Query: 426 DNYSFVG-LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
            N  F G L+  +    +I+EAI+  + +V N+   + HV   ++  L     C +   L
Sbjct: 723 TNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVL-----CKRKKAL 777

Query: 485 FRRAIVEKYPLD------VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
             + + +K+  +      + SY   + GLL    TE+A  L+  MK     PN +TY ++
Sbjct: 778 DAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLL 837

Query: 539 LLSFCKERNIKMVKRLLQDV 558
           L +  K + I  +  L  ++
Sbjct: 838 LDAHGKSKRINKLYDLYSEM 857



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 112/487 (22%), Positives = 190/487 (39%), Gaps = 80/487 (16%)

Query: 98   GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
            G+      + G +   GC     TF   L    + +   + L+ F  M      P+    
Sbjct: 599  GKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTY 658

Query: 158  NIVMDVLFKIGRVDLGIKVLKETQLPNFLSFN-IALCNLC-------KLNDVSNVKDVIG 209
            N ++  L + GR+D         Q+  FLS + + LC L        ++ D   +K V+ 
Sbjct: 659  NTIIYGLIREGRIDYAFWFFH--QMKKFLSPDYVTLCTLIPGVVRHGRVEDA--IKVVME 714

Query: 210  MMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI---------------------- 247
             + +     N + +  L+ C      I EA     +++                      
Sbjct: 715  FVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRK 774

Query: 248  --------------TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTY 293
                           LG   ++ ++  L+DG       + A  L+E M   G  PN  TY
Sbjct: 775  KALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTY 834

Query: 294  TSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE 353
              L+    ++K  +  +     + S G  P+ + HN++I  L K  + + ALD+Y  L+ 
Sbjct: 835  NLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELM- 893

Query: 354  LKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVK 413
                               SG FS  P              Y  L+    KAG   QA+K
Sbjct: 894  -------------------SGDFSPTP------------CTYGPLIDGLLKAGRSEQAMK 922

Query: 414  LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
            ++  MLD G  P++  +  L+ G   + +ID A  +++ +V      +   +T +V+ L 
Sbjct: 923  IFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLC 982

Query: 474  EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
              GR  +A+Q F    +     D VSY   I GL +  R +EA  L+S+MK+  + P+ Y
Sbjct: 983  ITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLY 1042

Query: 534  TYRVMLL 540
            TY  ++L
Sbjct: 1043 TYNALIL 1049



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 150/303 (49%), Gaps = 7/303 (2%)

Query: 138  VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALC 193
             LE F++M   G  PN F  N+++D   K  R+    DL  ++      PN ++ NI + 
Sbjct: 815  ALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIIS 874

Query: 194  NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
             L K N+++   D+   ++   F P    +  L++   K GR  +A ++   M+  G   
Sbjct: 875  ALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGP 934

Query: 254  SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
            +   + +LI+GF +   +D A  L++KMV+ G  P++ +YT L++          A  + 
Sbjct: 935  NSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYF 994

Query: 314  DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
            + L+  G  PD V +N +I+ L K    D+AL ++  +    + PD YT+ +L+  + ++
Sbjct: 995  EELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIA 1054

Query: 374  GRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
            G+  +  K+   L+   +E  +  YNAL+     +G  +QA  ++  M+  G +P+  +F
Sbjct: 1055 GKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETF 1114

Query: 431  VGL 433
              L
Sbjct: 1115 AQL 1117



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 84/346 (24%), Positives = 161/346 (46%), Gaps = 8/346 (2%)

Query: 142  FDEMGR-FGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLC 196
            FD+  +  G  P   + N +MD L      +  +++ ++ +     PN  ++N+ L    
Sbjct: 783  FDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHG 842

Query: 197  KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
            K   ++ + D+   M  +G  PN     I+++   K   + +A  L   +++   S +  
Sbjct: 843  KSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPC 902

Query: 257  AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
             +  LIDG  +  R + A  ++E+M+  GC PN V Y  LI GF ++     A      +
Sbjct: 903  TYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKM 962

Query: 317  ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
              EG  PDL  + +L++CL   G  D+A+  ++ L    L PD+ ++  +++ +  S R 
Sbjct: 963  VKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRL 1022

Query: 377  SLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
                 L   ++   +  DL  YNAL+ +   AG  + AVK+Y  +   G  P  +++  L
Sbjct: 1023 DEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNAL 1082

Query: 434  LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
            +RG   +   D+A +V++ +++   + N      + ++   AG  H
Sbjct: 1083 IRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAGLVH 1128



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/380 (21%), Positives = 170/380 (44%), Gaps = 20/380 (5%)

Query: 176  VLKETQLPNFLSF-NIALCN---------------LCKLNDVSNVKDVIGMMVRK-GFYP 218
            +L E ++   +SF  I +CN               LCK     + ++V     +  G +P
Sbjct: 735  ILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHP 794

Query: 219  NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
             +  +  L++         +A +L   M + GT  +   + +L+D   + +R++    L+
Sbjct: 795  TLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLY 854

Query: 279  EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
             +M   GC PN +T+  +I   +++   + A      L S   +P    +  LID L K 
Sbjct: 855  SEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKA 914

Query: 339  GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVY 395
            G  + A+ +++ +L+    P+S  +  L++    SG      +L   +  E    DL  Y
Sbjct: 915  GRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSY 974

Query: 396  NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
              L+   C  G  ++AV+ +  +   G  PD  S+  ++ GL  +R++DEA++++  +  
Sbjct: 975  TILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKN 1034

Query: 456  NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
               + + + + A++  L  AG+   A++++    +      V +Y   IRG    G  ++
Sbjct: 1035 RGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQ 1094

Query: 516  AYILYSQMKHIAVPPNAYTY 535
            A+ ++ +M  +   PN  T+
Sbjct: 1095 AFSVFKKMMVVGCSPNTETF 1114


>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 106/478 (22%), Positives = 206/478 (43%), Gaps = 49/478 (10%)

Query: 134 MYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFN 189
           +YGM       M +FG  P     N ++D   K GRVD  +++L E Q     PN +++N
Sbjct: 202 VYGM-------MEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYN 254

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
           + +  L K  ++   K +I  M+  G   +   +  L+N FC+ G   EA+ L+  M+  
Sbjct: 255 VLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNR 314

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
               +++ +  L+ G  +  ++      +  M+++  +P++V++ SL+ G+      S A
Sbjct: 315 RAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEA 374

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT------- 362
           F   D L+     P ++ +N LI  L   G  D AL +   + +  L PD +T       
Sbjct: 375 FLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNG 434

Query: 363 -------------FCSLLSTVCLSGRFSLLPKLVCGLEVE------------------AD 391
                        F  +LS      RF+   ++V  +++                    D
Sbjct: 435 CFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPD 494

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
           ++ YN  +   C+ G   +A  L   M+  G  PD+ ++  ++ G      + +A  V+ 
Sbjct: 495 VITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFN 554

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
            ++    A +   +T ++           A   F + + +  P +V++Y   I GL    
Sbjct: 555 EMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTR 614

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
           R +EAY  + +M+   + PN ++Y +++   C     +   RL ++++D +I+ D  T
Sbjct: 615 RMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFT 672



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 122/514 (23%), Positives = 226/514 (43%), Gaps = 23/514 (4%)

Query: 74  AKQRDYFHDVQSFDHMISVVTRLT--------GRFETVRGIVGELARVGCVIKAQTFLLF 125
           +K ++ +  ++ F    +VVT  T        GR +    ++ E+   GC     T+ + 
Sbjct: 197 SKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVL 256

Query: 126 LR-IYWRGEM---YGMVLEAFDE-MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET 180
           +  +  +GE+    G++ E  +  +    +T N          LF +   DL  +++   
Sbjct: 257 VNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLF-VEAFDLVEEMVNRR 315

Query: 181 QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAY 240
             P   ++N  +  LCK   V+ V+     M++  F P++  F  LL  +C+ G I+EA+
Sbjct: 316 AFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAF 375

Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
            L   +       +V  +  LI G      LD A  L ++M   G  P++ TYT L+ G 
Sbjct: 376 LLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGC 435

Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
            +    S+A  F + + S+G  PD   +N  I    K+     A  + + +L     PD 
Sbjct: 436 FKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDV 495

Query: 361 YTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNT 417
            T+   +  +C  G F     L+  +  +    D V Y ++++ F K G   +A +++N 
Sbjct: 496 ITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNE 555

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           ML KG  P   ++  L+      + +D A   +  ++  +   N   + AI++ L    R
Sbjct: 556 MLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRR 615

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
             +A + F     +    +  SYT+ I      G  EEA  LY +M    + P+++T+ V
Sbjct: 616 MDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSV 675

Query: 538 MLLSFCKE---RNIKMVKRLLQDV---IDARIEL 565
            L +  ++     ++ V+ L+Q+V   I+ RIE+
Sbjct: 676 FLKNLHRDYQVHAVQCVESLIQNVEDNINVRIEM 709



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 98/389 (25%), Positives = 180/389 (46%), Gaps = 5/389 (1%)

Query: 175 KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
           K+++   LP+  + N  L  L   N +S  K+V GMM + G  P V  +  +L+ +CK G
Sbjct: 170 KMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEG 229

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
           R+ +A +LL  M   G   +   + VL++G  +   L+ A  L E+M+ +G + +  TY 
Sbjct: 230 RVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYN 289

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
            LI GF +  +F  AF  ++ + +    P L  +N L+  L K          +  +L+ 
Sbjct: 290 PLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKS 349

Query: 355 KLVPDSYTFCSLL----STVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQ 410
           K  PD  +F SLL     T C+S  F L  +L C  ++   ++ YN L+   C  G+ + 
Sbjct: 350 KFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCR-DLVPTVITYNTLIHGLCMWGYLDA 408

Query: 411 AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
           A++L   M D+G  PD +++  L+ G      +  A   +  ++      +   +   + 
Sbjct: 409 ALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIV 468

Query: 471 RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
             ++      A  +    +   +P DV++Y V +  L + G  EEA  L   M    + P
Sbjct: 469 GEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIP 528

Query: 531 NAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           +  TY  ++  F K  +++  + +  +++
Sbjct: 529 DHVTYTSIINGFVKNGHLRKAREVFNEML 557



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/401 (22%), Positives = 178/401 (44%), Gaps = 11/401 (2%)

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
           V   M+R G  P+V+    +L        +++A  + G+M   G   +V  +  ++D + 
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
           +  R+D A  L  +M + GC PN VTY  L+ G  +      A   ++ + + G      
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC----LSG---RFSLL 379
            +N LI+   + G + +A D+ + ++  +  P   T+ +L+  +C    ++G   RFS +
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346

Query: 380 PKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
            K     +   D+V +N+LL  +C+ G  ++A  L++ +  +   P   ++  L+ GLC 
Sbjct: 347 LK----SKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCM 402

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
              +D A+ + + +       +   +T +V+   + G    A   F   + +    D  +
Sbjct: 403 WGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFA 462

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           Y   I G ++   T  A+ +  +M     PP+  TY V + + C++ N +    LL++++
Sbjct: 463 YNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMV 522

Query: 560 DARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
              +  D+ T   +     K      A     EM + G+ P
Sbjct: 523 SDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAP 563



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 77/330 (23%), Positives = 135/330 (40%), Gaps = 42/330 (12%)

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           +++KM++NG  P+V     +++   +  + S A +   M+E  G  P +V +N ++D   
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV-----CGLEVEAD 391
           K G  D AL++   + E    P+  T+  L++ +   G       L+      GL V A 
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSA- 285

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
              YN L++ FC+ G   +A  L   M+++   P   ++  L+ GLC   ++        
Sbjct: 286 -YTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQV-------- 336

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
                         T +  R             F   +  K+  D+VS+   + G    G
Sbjct: 337 --------------TGVRLR-------------FSDMLKSKFTPDIVSFNSLLYGYCRTG 369

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSI 571
              EA++L+ ++K   + P   TY  ++   C    +    RL +++ D  +  D  T  
Sbjct: 370 CISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYT 429

Query: 572 RLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            L    FK    S A     EM + GL PD
Sbjct: 430 ILVNGCFKLGYVSMARGFFNEMLSKGLKPD 459


>gi|242061542|ref|XP_002452060.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
 gi|241931891|gb|EES05036.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
          Length = 674

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 114/442 (25%), Positives = 205/442 (46%), Gaps = 13/442 (2%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           ++E    ++ E+ R  C     TF   +R + +  +    +E  ++M ++G  P+    +
Sbjct: 234 QWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYS 293

Query: 159 IVMDVLFKIGRVDLGIKVLKETQL--PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
            +++   + GRVD  +K+L  T L  PN + +N AL  LC       V ++I  MVRK  
Sbjct: 294 TLVNGFSEHGRVDDALKLLS-TMLCRPNTVCYNAALKGLCIAGRWDEVGELIAEMVRKDC 352

Query: 217 YPNVRMFEILLNCFCKMGRIAE-AYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAG 275
            PN   F  L+N  C+  R+AE A ++L  M   G    V ++  +I  F      D A 
Sbjct: 353 PPNDATFSTLINSLCQ-NRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACADDAL 411

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL-DMLESEGHAPDLVFHNVLIDC 334
            L   M+   C P+ +++ +++K    A+ +  A   +  ML+ + H  ++ F N+LID 
Sbjct: 412 KLLNSML---CKPDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTF-NILIDS 467

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVV 394
           L + G   DA+++++ + + +  PD  T+ SL++     G   +   L   +   AD+  
Sbjct: 468 LCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSMPCRADIFS 527

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           YNA L   C A   + A +L   M+ K   P+  +F  L+  LC    ++ AI VY+ + 
Sbjct: 528 YNATLKGLCMAARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQMP 587

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
                 +   + A+++   E G    A++       E    D +SY   ++GL    R +
Sbjct: 588 KYGITPDIFTYNALINGYSEQGCLDDALKFLSTMPCEP---DTISYNSILKGLCRAERWK 644

Query: 515 EAYILYSQMKHIAVPPNAYTYR 536
           +A  L ++M      PN  T++
Sbjct: 645 DAEKLVTEMLRKNCTPNEVTFK 666



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/472 (21%), Positives = 214/472 (45%), Gaps = 23/472 (4%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D  S + +++   R    ++  R  V E AR        T+   +  Y R    G + +A
Sbjct: 152 DAVSHNTLVAGYCRDGSLWDAER--VLEAARASGAANVVTYTALIDGYCRS---GRLTDA 206

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE----TQLPNFLSFNIALCNLCK 197
              +      P+T+  N V+  L    + +   ++++E       PN ++F   +   C+
Sbjct: 207 LRLIASMPVAPDTYTYNTVLKGLCFAKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQ 266

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              +    +++  M + G  P+V ++  L+N F + GR+ +A +LL  M+    ++  NA
Sbjct: 267 NGLLDRAVELLEQMPKYGCMPDVVIYSTLVNGFSEHGRVDDALKLLSTMLCRPNTVCYNA 326

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
               + G     R D  G L  +MV+  C PN  T+++LI    + ++   A   L+ ++
Sbjct: 327 ---ALKGLCIAGRWDEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQ 383

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G+ PD+V +N +I C S+    DDAL + + +L     PD+ +F ++L  +C + R+ 
Sbjct: 384 KYGYMPDVVSYNTIISCFSEQACADDALKLLNSML---CKPDTISFNAVLKCLCRAERWY 440

Query: 378 LLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
              +L+  +   +   + + +N L+   C+ G    A++++  M     TPD  ++  L+
Sbjct: 441 DAAELMAKMLKEDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLI 500

Query: 435 RGLCGARKIDE-AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
            G    + +D+ A ++++ +       +   + A +  L  A R   A +L    + +  
Sbjct: 501 NGF-SEQGLDKVAFDLFRSMPCR---ADIFSYNATLKGLCMAARWDDAGELIADMVTKDC 556

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
             + V++ + I  L + G    A  +Y QM    + P+ +TY  ++  + ++
Sbjct: 557 LPNEVTFNILINSLCQKGLVNRAIEVYEQMPKYGITPDIFTYNALINGYSEQ 608



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/376 (22%), Positives = 159/376 (42%), Gaps = 42/376 (11%)

Query: 174 IKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKM 233
           ++ LK +   + +S N  +   C+   + + + V+    R     NV  +  L++ +C+ 
Sbjct: 142 LEALKTSGAADAVSHNTLVAGYCRDGSLWDAERVLEA-ARASGAANVVTYTALIDGYCRS 200

Query: 234 GRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTY 293
           GR+ +A +L+  M     + + N    ++ G    ++ + A  L  +M++N C PN VT+
Sbjct: 201 GRLTDALRLIASMPVAPDTYTYN---TVLKGLCFAKQWEEAEELMREMIRNNCHPNEVTF 257

Query: 294 TSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE 353
            + I+ F +  +   A   L+ +   G  PD+V ++ L++  S+ G  DDAL        
Sbjct: 258 ATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYSTLVNGFSEHGRVDDAL-------- 309

Query: 354 LKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVK 413
                       LLST+         P  VC          YNA L   C AG  ++  +
Sbjct: 310 -----------KLLSTMLCR------PNTVC----------YNAALKGLCIAGRWDEVGE 342

Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
           L   M+ K   P++ +F  L+  LC  R  + AI V + +       +   +  I+    
Sbjct: 343 LIAEMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFS 402

Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
           E      A++L    + +    D +S+   ++ L    R  +A  L ++M       N  
Sbjct: 403 EQACADDALKLLNSMLCKP---DTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEM 459

Query: 534 TYRVMLLSFCKERNIK 549
           T+ +++ S C+   +K
Sbjct: 460 TFNILIDSLCQNGQVK 475



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 115/259 (44%), Gaps = 5/259 (1%)

Query: 288 PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
           P V+T   LIK     +  + A   L+ L++ G A D V HN L+    + GS  DA  V
Sbjct: 117 PAVITCNILIKKLCARRRLADAERVLEALKTSGAA-DAVSHNTLVAGYCRDGSLWDAERV 175

Query: 348 YDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGF 407
            +         +  T+ +L+   C SGR +   +L+  + V  D   YN +L   C A  
Sbjct: 176 LEAA-RASGAANVVTYTALIDGYCRSGRLTDALRLIASMPVAPDTYTYNTVLKGLCFAKQ 234

Query: 408 PNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTA 467
             +A +L   M+     P+  +F   +R  C    +D A+ + + +       +  +++ 
Sbjct: 235 WEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYST 294

Query: 468 IVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIA 527
           +V+   E GR   A++L    +      + V Y  A++GL   GR +E   L ++M    
Sbjct: 295 LVNGFSEHGRVDDALKLLSTMLCRP---NTVCYNAALKGLCIAGRWDEVGELIAEMVRKD 351

Query: 528 VPPNAYTYRVMLLSFCKER 546
            PPN  T+  ++ S C+ R
Sbjct: 352 CPPNDATFSTLINSLCQNR 370



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/130 (20%), Positives = 62/130 (47%), Gaps = 1/130 (0%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           +  R++    ++ ++    C+    TF + +    +  +    +E +++M ++G TP+ F
Sbjct: 537 MAARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQMPKYGITPDIF 596

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
             N +++   + G +D  +K L      P+ +S+N  L  LC+     + + ++  M+RK
Sbjct: 597 TYNALINGYSEQGCLDDALKFLSTMPCEPDTISYNSILKGLCRAERWKDAEKLVTEMLRK 656

Query: 215 GFYPNVRMFE 224
              PN   F+
Sbjct: 657 NCTPNEVTFK 666


>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
 gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
          Length = 973

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/412 (25%), Positives = 188/412 (45%), Gaps = 20/412 (4%)

Query: 210 MMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLR 269
           +M   G   N   +  L+    K G   EA ++  +M+  G   SV  ++VL+  F + R
Sbjct: 185 VMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRR 244

Query: 270 RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHN 329
            ++   +L  +M  +G  PNV +YT  I+   +AK F  A+  L  +E+EG  PD++ H 
Sbjct: 245 DVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHT 304

Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE 389
           VLI  L   G   DA DV+  + +    PD  T+ +LL     +G    + ++   ++ +
Sbjct: 305 VLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKAD 364

Query: 390 A---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
               ++V Y A++   C+ G   +A+++++ M  KG  P+ YS+  L+ G   A +  +A
Sbjct: 365 GYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDA 424

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
           + +++ + ++ P  N + H   ++   ++G   KAIQ +     +    DVV+    + G
Sbjct: 425 LELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFG 484

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           L + GR   A  ++ ++K + V P+  TY +M+    K        ++  D+I+     D
Sbjct: 485 LAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPD 544

Query: 567 YHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTPV 618
                              AVN L++        DE WR    L +  + P 
Sbjct: 545 V-----------------LAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPT 579



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 131/568 (23%), Positives = 260/568 (45%), Gaps = 25/568 (4%)

Query: 49  APHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVG 108
           A  ++H+ L +      AL  F   A++    H   S ++M+ ++ R  GR       VG
Sbjct: 92  AEDVIHA-LRSADGPAEALERFRSAARKPRVAHTTASCNYMLELM-RGHGR-------VG 142

Query: 109 ELARVGCVIKAQ-------TFL-LFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIV 160
           ++A V  V++ Q       TF  +F  +   G +    + A   M   G   N +  N +
Sbjct: 143 DMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPV-ALPVMKEAGIVLNAYTYNGL 201

Query: 161 MDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
           +  L K G     ++V +    +  +P+  ++++ +    K  DV  V  ++  M   G 
Sbjct: 202 VYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGV 261

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
            PNV  + I +    +  R  EAY++L  M   G    V   TVLI       R+  A  
Sbjct: 262 KPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKD 321

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           ++ KM ++   P+ VTY +L+  F +           + ++++G+  ++V +  +ID L 
Sbjct: 322 VFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALC 381

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV---EADLV 393
           ++G   +AL+++D + +  +VP+ Y++ SL+S    + RF    +L   +++   + +  
Sbjct: 382 QVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGY 441

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            +   ++Y+ K+G   +A++ Y  M  KG  PD  +   +L GL  + ++  A  V+  +
Sbjct: 442 THVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHEL 501

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
                + +   +T ++    +A +  +A+++F   I      DV++    I  L + GR 
Sbjct: 502 KAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRG 561

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
           +EA+ ++ Q+K + + P   TY  +L    +E  +K V  LL+++  +    +  T   +
Sbjct: 562 DEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTI 621

Query: 574 TKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
              + K  + + A++ L  M   G IPD
Sbjct: 622 LDCLCKNGAVNDALDMLYSMTTKGCIPD 649



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 102/478 (21%), Positives = 208/478 (43%), Gaps = 9/478 (1%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           +GR    + +  EL  +G      T+ + ++   +   +   ++ F +M      P+  A
Sbjct: 488 SGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLA 547

Query: 157 RNIVMDVLFKIGRVDLGIKV---LKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N ++D L+K GR D   ++   LKE  L P   ++N  L  L +   V  V  ++  M 
Sbjct: 548 VNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMY 607

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
              + PN+  +  +L+C CK G + +A  +L  M T G    ++++  +I G  +  R +
Sbjct: 608 HSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYN 667

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL-DMLESEGHAPDLVFHNVL 331
            A  ++ +M +    P+  T  +++  F++  +   A   + D     G   D    + L
Sbjct: 668 EAFSIFCQM-KKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSL 726

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---V 388
           ++ + K    + +++  + +    +  D +  C L+  +C   +     +LV   +   V
Sbjct: 727 MEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGV 786

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
                +YN+L+         + A  L+  M + G  PD +++  LL  +  + +I+E + 
Sbjct: 787 SLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLK 846

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           V + +           +  I+  L+++ R  +AI L+   + + +     +Y   + GLL
Sbjct: 847 VQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLL 906

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           + GR E+A  L+++M       N   Y ++L       N + V  L QD++D  I  D
Sbjct: 907 KAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPD 964



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 110/541 (20%), Positives = 231/541 (42%), Gaps = 15/541 (2%)

Query: 71  IWCAKQRDYFHD-VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIY 129
           IW A + D ++D V ++  +I  + ++   FE +  +  E+ + G V +  ++   +  +
Sbjct: 357 IWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALE-MFDEMKQKGIVPEQYSYNSLISGF 415

Query: 130 WRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL------- 182
            + + +G  LE F  M   G  PN +   + ++   K G     IK ++  +L       
Sbjct: 416 LKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGE---SIKAIQRYELMKSKGIV 472

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+ ++ N  L  L K   +   K V   +   G  P+   + +++ C  K  +  EA ++
Sbjct: 473 PDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKI 532

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
              MI       V A   LID   +  R D A  ++ ++ +    P   TY +L+ G   
Sbjct: 533 FYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGR 592

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
                     L+ +    + P+L+ +N ++DCL K G+ +DALD+   +     +PD  +
Sbjct: 593 EGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSS 652

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGLE--VEADLVVYNALLSYFCKAGFPNQAVK-LYNTML 419
           + +++  +    R++    + C ++  +  D      +L  F K G   +A+  + +  L
Sbjct: 653 YNTVIYGLVKEERYNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFL 712

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
             G   D  S   L+ G+     I+++I   + I  +   ++      ++  L +  +  
Sbjct: 713 QPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKAL 772

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
           +A +L ++       L    Y   I GL++    + A  L+++MK +   P+ +TY ++L
Sbjct: 773 EAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLL 832

Query: 540 LSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLI 599
            +  K   I+ + ++ +++     E  Y T   +   + K      A++    + + G  
Sbjct: 833 DAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFS 892

Query: 600 P 600
           P
Sbjct: 893 P 893



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 3/209 (1%)

Query: 226 LLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
           L+   CK  +  EA++L+    + G SL    +  LI G      +D+A  L+ +M + G
Sbjct: 761 LIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELG 820

Query: 286 CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL 345
           C P+  TY  L+    ++          + +  +G+    V +N +I  L K    + A+
Sbjct: 821 CGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAI 880

Query: 346 DVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYF 402
           D+Y  L+     P   T+  LL  +  +GR      L   +     +A+  +YN LL+  
Sbjct: 881 DLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGH 940

Query: 403 CKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
             AG   +   L+  M+D+G  PD  S+ 
Sbjct: 941 RIAGNTEKVCHLFQDMVDQGINPDIKSYT 969



 Score = 48.1 bits (113), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 36/167 (21%), Positives = 70/167 (41%), Gaps = 4/167 (2%)

Query: 101 ETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIV 160
           +   G+  E+  +GC     T+ L L    +      +L+  +EM R G+       N +
Sbjct: 807 DIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTI 866

Query: 161 MDVLFKIGR----VDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
           +  L K  R    +DL   ++ +   P   ++   L  L K   + + +++   M+  G 
Sbjct: 867 ISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGC 926

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLID 263
             N  ++ ILLN     G   +   L   M+  G +  + ++T++ID
Sbjct: 927 KANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIID 973


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 115/509 (22%), Positives = 218/509 (42%), Gaps = 12/509 (2%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCK 197
           + EM   G  P+    + ++  L K   +D  ++VL    K   +P+ +++N  L   C 
Sbjct: 224 YHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCS 283

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
                     +  M   G  PNV  +  L+N  CK GR  EA ++   M   G    +  
Sbjct: 284 SGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIAT 343

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  L+ G+     L     L + MV+NG  P+   +  LI  + + +    A      + 
Sbjct: 344 YRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMR 403

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G  P++V +  +ID L K GS DDA+  ++ +++  L P+   + SL+  +C   ++ 
Sbjct: 404 QHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWD 463

Query: 378 LLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
              +L+  +    +  + + +N+++   CK G   ++ KL++ M+  G  PD  ++  L+
Sbjct: 464 KAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLI 523

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            G C A K+DEA  +   +V      +   +  +++      R   A+ LF+  +     
Sbjct: 524 DGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVS 583

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
            ++++Y + ++GL    RT  A  LY  +          TY ++L   CK        R+
Sbjct: 584 PNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRM 643

Query: 555 LQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDET 614
            Q++    ++L+  T   +   + K      A +        GL+PD   R   L+++  
Sbjct: 644 FQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPD--VRTYSLMAENL 701

Query: 615 MTPVSLF---DGFVPCERRAGNANHLLLN 640
           +   SL    D F+  E    +A+  +LN
Sbjct: 702 IEQGSLEELDDLFLSMEENGCSADSRMLN 730



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 97/443 (21%), Positives = 204/443 (46%), Gaps = 7/443 (1%)

Query: 109 ELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIG 168
           E+   G +    T+   +    + +     +E  + M + G  P+    N ++      G
Sbjct: 226 EMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSG 285

Query: 169 RVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFE 224
           +    I  LK+ +     PN ++++  +  LCK    +  + +   M ++G  P++  + 
Sbjct: 286 QPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYR 345

Query: 225 ILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN 284
            LL  +   G + E + LL LM+  G     + + +LI  + +  ++D A  ++ KM Q+
Sbjct: 346 TLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQH 405

Query: 285 GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
           G +PNVV Y ++I    ++     A  + + +  EG  P+++ +  LI  L     +D A
Sbjct: 406 GLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKA 465

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF---SLLPKLVCGLEVEADLVVYNALLSY 401
            ++   +L+  +  ++  F S++ + C  GR      L  L+  + V+ D++ YN L+  
Sbjct: 466 EELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDG 525

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVN 461
            C AG  ++A KL  +M+  G  PD  ++  L+ G C   ++D+A+ +++ +V +  + N
Sbjct: 526 CCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPN 585

Query: 462 AHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYS 521
              +  I+  L    R   A +L+         L++ +Y + + GL +   T+EA  ++ 
Sbjct: 586 IITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQ 645

Query: 522 QMKHIAVPPNAYTYRVMLLSFCK 544
            +    +     T+ +M+ +  K
Sbjct: 646 NLCLTDLQLETRTFNIMIGALLK 668



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 102/457 (22%), Positives = 197/457 (43%), Gaps = 41/457 (8%)

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK---GFYPNVRMFEILLNCFCKMGRIAE 238
           +P+  S+N  L  LC  N      +++ MM      G  P+V  +  +LN F K G   +
Sbjct: 160 IPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDK 219

Query: 239 AYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIK 298
           AY     M+  G    V  ++ +I    + + +D A  +   MV+NG  P+ +TY S++ 
Sbjct: 220 AYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 279

Query: 299 GFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP 358
           G+  +     A   L  + S+G  P++V ++ L++ L K G   +A  ++D + +  L P
Sbjct: 280 GYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEP 339

Query: 359 DSYTFCSLLSTVCLSG-------------RFSLLPK------LVCGLE------------ 387
           D  T+ +LL      G             R  + P       L+C               
Sbjct: 340 DIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVF 399

Query: 388 -------VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
                  +  ++V Y  ++   CK+G  + A+  +  M+D+G TP+   +  L+ GLC  
Sbjct: 400 SKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTC 459

Query: 441 RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSY 500
            K D+A  +   ++     +N     +I+D   + GR  ++ +LF   +      D+++Y
Sbjct: 460 DKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITY 519

Query: 501 TVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
              I G    G+ +EA  L + M  + V P+  TY  ++  +C+   +     L ++++ 
Sbjct: 520 NTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVS 579

Query: 561 ARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLG 597
           + +  +  T   + + +F    +++A    V +   G
Sbjct: 580 SGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSG 616



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 113/474 (23%), Positives = 204/474 (43%), Gaps = 14/474 (2%)

Query: 142 FDEMGRFG---FTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF----LSFNIALCN 194
           ++ M R G    TP      I++    + GR+DLG   L       F    ++F   L  
Sbjct: 77  YNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKG 136

Query: 195 LCKLNDVSNVKD-VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL---G 250
           LC     S+  D V+  M   G  P+V  +  LL   C   R  EA +LL +M      G
Sbjct: 137 LCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGG 196

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
           +   V ++  +++GF +    D A   + +M+  G  P+VVTY+S+I    +A+    A 
Sbjct: 197 SPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAM 256

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
             L+ +   G  PD + +N ++      G   +A+     +    + P+  T+ SL++ +
Sbjct: 257 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYL 316

Query: 371 CLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           C +GR +   K+   +    +E D+  Y  LL  +   G   +   L + M+  G  PD+
Sbjct: 317 CKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDH 376

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
           + F  L+       K+D+A+ V+  +  +    N   +  ++D L ++G    A+  F +
Sbjct: 377 HVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQ 436

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN 547
            I E    +++ YT  I GL    + ++A  L  +M    +  N   +  ++ S CKE  
Sbjct: 437 MIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 496

Query: 548 IKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           +   ++L   ++   ++ D  T   L            A   L  M ++G+ PD
Sbjct: 497 VIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPD 550



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 83/379 (21%), Positives = 170/379 (44%), Gaps = 7/379 (1%)

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
           + R G       F + +  Y + E     +  F +M + G  PN      V+DVL K G 
Sbjct: 367 MVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGS 426

Query: 170 VDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEI 225
           VD  +    +++ E   PN + +   +  LC  +     +++I  M+ +G   N   F  
Sbjct: 427 VDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNS 486

Query: 226 LLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
           +++  CK GR+ E+ +L  LM+ +G    +  +  LIDG     ++D A  L   MV  G
Sbjct: 487 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVG 546

Query: 286 CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL 345
             P++VTY +LI G+        A +    + S G +P+++ +N+++  L        A 
Sbjct: 547 VKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 606

Query: 346 DVYDGLLELKLVPDSYTFCSLLSTVC---LSGRFSLLPKLVCGLEVEADLVVYNALLSYF 402
           ++Y  + +     +  T+  +L  +C   L+     + + +C  +++ +   +N ++   
Sbjct: 607 ELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGAL 666

Query: 403 CKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNA 462
            K G  ++A  L+      G  PD  ++  +   L     ++E  +++  +  N  + ++
Sbjct: 667 LKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADS 726

Query: 463 HVHTAIVDRLIEAGRCHKA 481
            +  +IV +L++ G   +A
Sbjct: 727 RMLNSIVRKLLQRGDITRA 745



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/228 (21%), Positives = 90/228 (39%), Gaps = 4/228 (1%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           L G+ +    ++  +  VG      T+   +  Y R       L  F EM   G +PN  
Sbjct: 528 LAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNII 587

Query: 156 ARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
             NI++  LF   R     +L + + K        ++NI L  LCK N       +   +
Sbjct: 588 TYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 647

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
                    R F I++    K GR+ EA  L       G    V  ++++ +       L
Sbjct: 648 CLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSL 707

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
           +    L+  M +NGCS +     S+++  ++    + A ++L M++ +
Sbjct: 708 EELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEK 755


>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Glycine max]
          Length = 703

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 113/461 (24%), Positives = 215/461 (46%), Gaps = 12/461 (2%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDV 207
           P+  A + ++D L K  + D  +    K++    LP F S +    +    +  S    V
Sbjct: 40  PSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSV 99

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN--AWTVLIDGF 265
           + +M ++GF  NV    ++L  FC+ G+  +A  L   M      +  +   +  L++GF
Sbjct: 100 LSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGF 159

Query: 266 RRLRRLDMAGYLWEKMVQNG-CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
            + +RL  A  L+E M + G C PN+VTY+ LI  + ++         L+ +E EG   D
Sbjct: 160 CKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKAD 219

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF---SLLPK 381
           +  ++ LI      G  +   +++D +L  K+ P+  T+  L+  +  +GR+   S + K
Sbjct: 220 VFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLK 279

Query: 382 LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
            +    V  D+V Y  L    CK G    A+K+ + M+ KG  P   ++  ++ GLC   
Sbjct: 280 DMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKED 339

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL--DVVS 499
           ++D+A  V + +V      +A  +  ++  L  AG+ H+A+ L++  + EK+ +  DV +
Sbjct: 340 RMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFT 399

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
               I+GL + GR  +A  ++S M  + +  N  TY  ++  +   R +    +L +  +
Sbjct: 400 CNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAV 459

Query: 560 DARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           ++    +  T   +   + K    S A     +M + G+ P
Sbjct: 460 ESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRP 500



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 108/460 (23%), Positives = 204/460 (44%), Gaps = 46/460 (10%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           PN +++++ +   CK  +V     ++  M R+G   +V ++  L++ FC  G I    +L
Sbjct: 183 PNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGREL 242

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
              M+    S +V  ++ L+ G  R  R   A  + + M   G  P+VV YT L  G  +
Sbjct: 243 FDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCK 302

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
                 A   LD++  +G  P  + +NV+++ L K    DDA  V + +++    PD+ T
Sbjct: 303 NGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVT 362

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
           +                                N LL   C AG  ++A+ L+  +L + 
Sbjct: 363 Y--------------------------------NTLLKGLCGAGKIHEAMDLWKLLLSEK 390

Query: 423 F--TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
           F   PD ++   L++GLC   ++ +A  ++  +V      N   +  +++  + A +  +
Sbjct: 391 FHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIE 450

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
           A++L++ A+   +  + ++Y+V I GL +      A  L+ +MK   + P    Y  ++ 
Sbjct: 451 ALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMT 510

Query: 541 SFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           S C+E +++  + L Q++ +    +D  +   +     K     SA   L EM  + L+P
Sbjct: 511 SLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVP 570

Query: 601 DEM--------WRKLGLLSDETMTPVSLFDGFVPCERRAG 632
           D +        + KLG+L DE M    L++  V C    G
Sbjct: 571 DAVTFSILINRFSKLGML-DEAM---GLYEKMVSCGHVPG 606



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/432 (23%), Positives = 193/432 (44%), Gaps = 42/432 (9%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG----IKV 176
           T+ + +  Y +    G  L   +EM R G   + F  + ++      G ++ G     ++
Sbjct: 187 TYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEM 246

Query: 177 LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
           L+    PN ++++  +  L +        +++  M  +G  P+V  + +L +  CK GR 
Sbjct: 247 LRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRA 306

Query: 237 AEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSL 296
            +A ++L LM+  G       + V+++G  +  R+D A  + E MV+ G  P+ VTY +L
Sbjct: 307 GDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTL 366

Query: 297 IKGFMEAKMFSIAFSFLDMLESEGH--APDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
           +KG   A     A     +L SE     PD+   N LI  L K G   DA  ++  ++E+
Sbjct: 367 LKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEM 426

Query: 355 KLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKL 414
            L                                + ++V YN L+  +  A    +A+KL
Sbjct: 427 GL--------------------------------QGNIVTYNFLIEGYLAARKLIEALKL 454

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV--HTAIVDRL 472
           +   ++ GF+P++ ++  ++ GLC  + +  A  ++    M +  +   V  + A++  L
Sbjct: 455 WKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLF--CKMKDSGIRPTVIDYNALMTSL 512

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
                  +A  LF+      + +DVVS+ + I G L+ G  + A  L S+M  + + P+A
Sbjct: 513 CREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDA 572

Query: 533 YTYRVMLLSFCK 544
            T+ +++  F K
Sbjct: 573 VTFSILINRFSK 584



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 46/203 (22%), Positives = 91/203 (44%), Gaps = 4/203 (1%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           PN +++++ +  LCK+  +S  + +   M   G  P V  +  L+   C+   + +A  L
Sbjct: 465 PNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSL 524

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
              M  +  ++ V ++ ++IDG  +   +  A  L  +M      P+ VT++ LI  F +
Sbjct: 525 FQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSK 584

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
             M   A    + + S GH P +V  + L+      G  +  + +   + +  +V DS  
Sbjct: 585 LGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKL 644

Query: 363 FCSLLSTVCLSGR----FSLLPK 381
             ++L+ +C   R      +LPK
Sbjct: 645 TSTILACLCHMSRNLDVEKILPK 667


>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
          Length = 700

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 115/484 (23%), Positives = 210/484 (43%), Gaps = 52/484 (10%)

Query: 130 WRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV----LKETQLPNF 185
           WR       L+ FDEM   G  PN    N ++D   K G ++ G ++    L +   PN 
Sbjct: 205 WRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNI 264

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN-----------VRMFE---------- 224
           +++N+ L  LC+   +   + ++  M     +P+            R  E          
Sbjct: 265 VTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAE 324

Query: 225 --------------ILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
                         ILLN  CK G++A+A Q+L +++  G   +   +  LI+G+ ++R 
Sbjct: 325 SLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRD 384

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           L  A  ++E+M      P+ +TY +LI G  + +M + A   +  +E  G  P +   N 
Sbjct: 385 LRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNT 444

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---- 386
           LID     G  +    V   + +  +  D  +F S++   C +G+   +P+ V  L    
Sbjct: 445 LIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGK---IPEAVAILDDMI 501

Query: 387 --EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
             +V  +  VYN+++  + ++G   QA  L   M + G +    ++  LL+GLC + +ID
Sbjct: 502 YKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQID 561

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL--DVVSYTV 502
           EA  +   +       +   +  I+      G   KA++L +   + KY +   + +Y  
Sbjct: 562 EAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQE--MNKYGIRPTLRTYHT 619

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
            +  L   GR  +   LY QM H  V P++  Y +M+ ++ +  N   V  L +++ +  
Sbjct: 620 LVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKG 679

Query: 563 IELD 566
           I  D
Sbjct: 680 IAFD 683



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/465 (22%), Positives = 197/465 (42%), Gaps = 44/465 (9%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE------TQLPNFLSFNIA 191
           V  AF  +   G  P+TFA N V+      G +D+ + +++          P+  S+N+ 
Sbjct: 141 VRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNVV 200

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           +  L +    S+   V   MV  G  PN   +  +++   K G +   ++L   M+  G 
Sbjct: 201 IAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGP 260

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT----------------- 294
             ++  + VL+ G  R  R+D    L ++M  +   P+  TY+                 
Sbjct: 261 KPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLS 320

Query: 295 ----SLIKGFM--------------EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
               SL KG M              +    + A   L+ML   G  P  V +N LI+   
Sbjct: 321 LFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYC 380

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLV 393
           ++     A  +++ +    + PD  T+ +L++ +C     +    LV  +E   V+  + 
Sbjct: 381 QVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVE 440

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            +N L+  +  AG   +   + + M  KG   D  SF  +++  C   KI EA+ +   +
Sbjct: 441 TFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDM 500

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
           +  + A NA V+ +I+D  IE+G   +A  L  +         +V+Y + ++GL    + 
Sbjct: 501 IYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQI 560

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           +EA  L   +++  + P+  +Y  ++ + C + +      LLQ++
Sbjct: 561 DEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEM 605



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 82/390 (21%), Positives = 159/390 (40%), Gaps = 43/390 (11%)

Query: 80  FHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVL 139
           F D  ++  +   +TR TG   T+  +  E  + G ++ A T  + L    +        
Sbjct: 296 FPDGFTYSILFDGLTR-TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAE 354

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNL 195
           +  + +   G  P T   N +++   ++  +     + ++ +     P+ +++N  +  L
Sbjct: 355 QVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGL 414

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC-------------------------- 229
           CKL  V+  +D++  M + G  P+V  F  L++                           
Sbjct: 415 CKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDV 474

Query: 230 ---------FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
                    FCK G+I EA  +L  MI    + +   +  +ID +      + A  L EK
Sbjct: 475 ISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEK 534

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           M  +G S ++VTY  L+KG   +     A   +  L ++G  PD+V +N +I      G 
Sbjct: 535 MKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGD 594

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR---FSLLPKLVCGLEVEADLVVYNA 397
            D AL++   + +  + P   T+ +L+S +  +GR      L + +    VE    +Y  
Sbjct: 595 TDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGI 654

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           ++  + +    ++   L   M +KG   D+
Sbjct: 655 MVDAYVRCENDSKVASLKKEMSEKGIAFDD 684



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 96/466 (20%), Positives = 182/466 (39%), Gaps = 89/466 (19%)

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG------------- 264
           P++    +LL     +GR A+     GL++  G      AW  ++               
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179

Query: 265 FRRLRRLDMA------------GYLW------------EKMVQNGCSPNVVTYTSLIKGF 300
            RR+ R + A              LW            ++MV  G  PN +TY ++I G 
Sbjct: 180 VRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGH 239

Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
           ++       F   D +  +G  P++V +NVL+  L + G  D+   + D +    + PD 
Sbjct: 240 VKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDG 299

Query: 361 YTF----------------------------------CS-LLSTVCLSGRFSLLPKLVCG 385
           +T+                                  CS LL+ +C  G+ +   + V  
Sbjct: 300 FTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQ-VLE 358

Query: 386 LEVEADL----VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
           + V   L    V+YN L++ +C+      A  ++  M  +   PD+ ++  L+ GLC   
Sbjct: 359 MLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLE 418

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHT--AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
            + +A ++   + M    V+  V T   ++D    AG+  K   +      +    DV+S
Sbjct: 419 MVTKAEDLV--MEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVIS 476

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           +   ++   + G+  EA  +   M +  V PNA  Y  ++ ++ +  + +    L++ + 
Sbjct: 477 FGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMK 536

Query: 560 DARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMC----NLGLIPD 601
           ++ +      SI     + K    SS +++  E+     N GL PD
Sbjct: 537 NSGVS----ASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPD 578


>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Glycine max]
          Length = 827

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 117/513 (22%), Positives = 235/513 (45%), Gaps = 12/513 (2%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G+F       G+ A  G  + A ++ + ++   RG    +  +  +     G+ P+    
Sbjct: 236 GKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTY 295

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCN-----LCKLNDVSNVKDVIGMMV 212
             V+    ++G     ++ LK+  + + +  N+A+        C   DV++   +   +V
Sbjct: 296 AAVIGACVRLGNFGEALR-LKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVV 354

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
             G  PNV +F +L+    K+G + +A +L   M  +G   +V     L+ GFR+   L+
Sbjct: 355 EVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLE 414

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A  L +  V+NG + +VVTY  ++    E    + A +  D +  +G  P LV +N +I
Sbjct: 415 NAYLLLDGAVENGIA-SVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMI 473

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG----RFSLLPKLVCGLEV 388
               K G  DDA +V +G++E  L P++ T+  L+      G     F++  ++V    V
Sbjct: 474 LGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIV 533

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
             D   +N++++  CK G  ++A    NT + + F P + ++  ++ G      ID A +
Sbjct: 534 PTDYT-FNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAES 592

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           VY+ +  +  + N   +T++++   ++ +   A+++      +   LD+  Y   I G  
Sbjct: 593 VYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFC 652

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
           +    E A   +S++  + + PN   Y +M+ ++    N++    L +++I+ +I  D  
Sbjct: 653 KMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLK 712

Query: 569 TSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
               L   + K    S A++   EM   G++PD
Sbjct: 713 IYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPD 745



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/436 (23%), Positives = 206/436 (47%), Gaps = 6/436 (1%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK---ETQLPNFLSFNIALCNLC 196
           E +  M   G  P  F  N ++    K   ++    +L    E  + + +++NI L  LC
Sbjct: 383 ELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIASVVTYNIVLLWLC 442

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
           +L  V+   ++   M+ KG  P++  +  ++   CK G + +A++++  +I  G   +  
Sbjct: 443 ELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAI 502

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
            +T+L++G  +    + A  ++++MV  G  P   T+ S+I G  +    S A   L+  
Sbjct: 503 TYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTF 562

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
             +   P  + +N +ID   K G+ D A  VY  +   ++ P+  T+ SL++  C S + 
Sbjct: 563 IKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKM 622

Query: 377 SLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
            L  K+   ++   +E D+ VY  L++ FCK      A K ++ +L+ G TP+   +  +
Sbjct: 623 DLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIM 682

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           +        ++ A+N+++ ++ N    +  ++T+++D L++ G+   A+ L+   +    
Sbjct: 683 ISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGI 742

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
             D+  Y V I GL   G+ E A  +  +M    + P    Y  ++    KE N++   R
Sbjct: 743 VPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFR 802

Query: 554 LLQDVIDARIELDYHT 569
           L  +++D  +  D  T
Sbjct: 803 LHDEMLDKGLVPDDTT 818



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/392 (25%), Positives = 187/392 (47%), Gaps = 13/392 (3%)

Query: 128 IYWRGEMYGMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK---ETQ 181
           + W  E+ G V EA   +D+M   G TP+  + N ++    K G +D   +V+    E+ 
Sbjct: 438 LLWLCEL-GKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESG 496

Query: 182 L-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAY 240
           L PN +++ I +    K  D  +  ++   MV  G  P    F  ++N  CK+GR++EA 
Sbjct: 497 LKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEAR 556

Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
             L   I      +   +  +IDG+ +   +D A  ++ +M ++  SPNV+TYTSLI GF
Sbjct: 557 DKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGF 616

Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
            ++    +A    D ++ +G   D+  +  LI    KM   ++A   +  LLE+ L P++
Sbjct: 617 CKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNT 676

Query: 361 YTFCSLLSTV----CLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYN 416
             +  ++S       +    +L  +++   ++  DL +Y +L+    K G  + A+ LY+
Sbjct: 677 IVYNIMISAYRNLNNMEAALNLHKEMINN-KIPCDLKIYTSLIDGLLKEGKLSFALDLYS 735

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
            ML +G  PD + +  L+ GLC   +++ A  + + +  NN      ++  ++    + G
Sbjct: 736 EMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEG 795

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
              +A +L    + +    D  +Y + + G L
Sbjct: 796 NLQEAFRLHDEMLDKGLVPDDTTYDILVNGKL 827



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 114/538 (21%), Positives = 207/538 (38%), Gaps = 86/538 (15%)

Query: 176 VLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGR 235
           +L++  +P     N+ L  + + N V +   +   M  +  Y +    ++L+    K G+
Sbjct: 178 MLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLFDEMAERRIYGDCYTLQVLMRACLKGGK 237

Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE---------------- 279
             EA +  G     G  L   +++++I    R   LD+A  L E                
Sbjct: 238 FVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAA 297

Query: 280 -------------------KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
                              +MV +    NV   TSLIKG+      + A    D +   G
Sbjct: 298 VIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVG 357

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV----CLSGRF 376
             P++   +VLI+  SK+G+ + A ++Y  +  + L P  +    LL        L   +
Sbjct: 358 VTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAY 417

Query: 377 SLLPKLV-CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
            LL   V  G+   A +V YN +L + C+ G  N+A  L++ M+ KG TP   S+  ++ 
Sbjct: 418 LLLDGAVENGI---ASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMIL 474

Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK-YP 494
           G C    +D+A  V  GI+ +    NA  +T +++   + G C  A  +F + +     P
Sbjct: 475 GHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVP 534

Query: 495 LDV----------------------------------VSYTVAIRGLLEGGRTEEAYILY 520
            D                                   ++Y   I G ++ G  + A  +Y
Sbjct: 535 TDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVY 594

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKF 580
            +M    + PN  TY  ++  FCK   + +  ++  D+    +ELD      L     K 
Sbjct: 595 REMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKM 654

Query: 581 HSSSSAVNQLVEMCNLGLIPDEM--------WRKLGLLSDETMTPVSLFDGFVPCERR 630
               +A     ++  +GL P+ +        +R L  +         + +  +PC+ +
Sbjct: 655 QDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLK 712


>gi|2462828|gb|AAB72163.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1152

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 147/575 (25%), Positives = 247/575 (42%), Gaps = 44/575 (7%)

Query: 65  IALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETV----RGI------VGELARVG 114
           IA  FF W  +Q D     Q+F  M+ ++       E      R I      + +L   G
Sbjct: 138 IAFRFFNWIQRQSDVKQSRQAFAAMLEILAENDLMSEAYLVAERSIDLGMHEIDDLLIDG 197

Query: 115 CVIKAQTFLLFLRIYW---RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD 171
              K     L   + W   +  M    L +F++M R GF P+    NIV+ VL +  R+ 
Sbjct: 198 SFDKLIALKLLDLLLWVYTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVL-RDSRMM 256

Query: 172 LGIKVLKETQ-----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEIL 226
                + ET      +P  ++FN  L +  K  D+  V  +   M R+    +   + IL
Sbjct: 257 NKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNIL 316

Query: 227 LNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGC 286
           +N F K G++ EA +  G M   G +++  ++  LI+G+ +    D A  + ++M+  G 
Sbjct: 317 INGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGI 376

Query: 287 SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALD 346
            P   TY   I    +      A   L  +     APD+V +N L+    KMG + +A  
Sbjct: 377 YPTTSTYNIYICALCDFGRIDDARELLSSMA----APDVVSYNTLMHGYIKMGKFVEASL 432

Query: 347 VYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE---ADLVVYNALLSYFC 403
           ++D L    + P   T+ +L+  +C SG      +L   +  +    D++ Y  L+  F 
Sbjct: 433 LFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFV 492

Query: 404 KAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV-MNNPAVNA 462
           K G  + A ++Y+ ML KG  PD Y++     G       D+A  +++ +V  ++ A + 
Sbjct: 493 KNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDL 552

Query: 463 HVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQ 522
            ++   +D L + G   KAI+  R+        D V+YT  IRG LE G+ + A  LY +
Sbjct: 553 TIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDE 612

Query: 523 MKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHS 582
           M    + P+  TY V++    K                 R+E  +  S  + K   + + 
Sbjct: 613 MLRKRLYPSVITYFVLIYGHAKA---------------GRLEQAFQYSTEMKKRGVRPNV 657

Query: 583 SSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTP 617
            +     L  MC  G I DE +R L  + +E + P
Sbjct: 658 MTHNA-LLYGMCKAGNI-DEAYRYLCKMEEEGIPP 690



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 104/448 (23%), Positives = 196/448 (43%), Gaps = 12/448 (2%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF----LSFNIALCNLCKLN 199
           EM R     +    NI+++   K G+++   +   + +   F     SFN  +   CK  
Sbjct: 300 EMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQG 359

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
              +   V   M+  G YP    + I +   C  GRI +A +LL  M     +  V ++ 
Sbjct: 360 LFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVSYN 415

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
            L+ G+ ++ +   A  L++ +      P++VTY +LI G  E+     A    + + ++
Sbjct: 416 TLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQ 475

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR---- 375
              PD++ +  L+    K G+   A +VYD +L   + PD Y + +        G     
Sbjct: 476 LIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKA 535

Query: 376 FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
           F L  ++V       DL +YN  +   CK G   +A++    +   G  PD+ ++  ++R
Sbjct: 536 FRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIR 595

Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
           G     +   A N+Y  ++      +   +  ++    +AGR  +A Q            
Sbjct: 596 GYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRP 655

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
           +V+++   + G+ + G  +EAY    +M+   +PPN Y+Y +++   C     + V +L 
Sbjct: 656 NVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLY 715

Query: 556 QDVIDARIELDYHTSIRLTKFIFKFHSS 583
           ++++D  IE D +T   L K + K H S
Sbjct: 716 KEMLDKEIEPDGYTHRALFKHLEKDHES 743



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/453 (23%), Positives = 191/453 (42%), Gaps = 39/453 (8%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
            G+ E  R   G++ R G  +   +F   +  Y +  ++       DEM   G  P T  
Sbjct: 323 NGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTST 382

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
            NI +  L   GR+D   ++L     P+ +S+N  +    K+        +   +     
Sbjct: 383 YNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDI 442

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
           +P++  +  L++  C+ G +  A +L   M T      V  +T L+ GF +   L MA  
Sbjct: 443 HPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATE 502

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF-LDMLESEGHAPDLVFHNVLIDCL 335
           ++++M++ G  P+   YT+   G +       AF    +M+ ++ HAPDL  +NV ID L
Sbjct: 503 VYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGL 562

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADL 392
            K+G+   A++    +  + LVPD  T+ +++     +G+F +   L   +    +   +
Sbjct: 563 CKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSV 622

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           + Y  L+    KAG   QA +    M  +G  P+  +   LL G+C A  IDEA   Y+ 
Sbjct: 623 ITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEA---YRY 679

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           +                 ++ E G                 P +  SYT+ I    +  +
Sbjct: 680 LC----------------KMEEEG----------------IPPNKYSYTMLISKNCDFEK 707

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
            EE   LY +M    + P+ YT+R +     K+
Sbjct: 708 WEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKD 740



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/301 (22%), Positives = 131/301 (43%), Gaps = 13/301 (4%)

Query: 80  FHDVQSFDHMISVVTRLT--------GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWR 131
           F D+++ D   S+VT  T        G  E  + +  E+          T+   ++ + +
Sbjct: 434 FDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVK 493

Query: 132 GEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET-----QLPNFL 186
                M  E +DEM R G  P+ +A         ++G  D   ++ +E        P+  
Sbjct: 494 NGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLT 553

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
            +N+ +  LCK+ ++    +    + R G  P+   +  ++  + + G+   A  L   M
Sbjct: 554 IYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEM 613

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
           +      SV  + VLI G  +  RL+ A     +M + G  PNV+T+ +L+ G  +A   
Sbjct: 614 LRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNI 673

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
             A+ +L  +E EG  P+   + +LI        +++ + +Y  +L+ ++ PD YT  +L
Sbjct: 674 DEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRAL 733

Query: 367 L 367
            
Sbjct: 734 F 734


>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
          Length = 609

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 171/351 (48%), Gaps = 16/351 (4%)

Query: 115 CVIKAQT---------FLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           C I  QT         F  +++   +    G  ++  DEM   G  P+    N++++ + 
Sbjct: 69  CCINQQTLFPCFSLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 128

Query: 166 KIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
           K GR+D  IK L         PN ++ NI L ++C      + + ++  M+RKG  P+V 
Sbjct: 129 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV 188

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            F IL+N  C+ G +  A  +L  M   G + +  ++  L+ GF + +++D A    + M
Sbjct: 189 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 248

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
           V  GC P++VTY +L+    +     +A   L+ L S+G +P L+ +N +ID LSK+G  
Sbjct: 249 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKT 308

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNAL 398
           + A+ + D +    L PD  T+ SL+S +   G+     K    + GL +  + + YN++
Sbjct: 309 ERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSI 368

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
           +   CK+   ++A+     M+ K   P   ++  L+ G+       EA+++
Sbjct: 369 MLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDL 419



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/358 (25%), Positives = 165/358 (46%), Gaps = 9/358 (2%)

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
           TL    S++ ++  +    +   +  A  L ++M   G  P+VVTY  LI G  +     
Sbjct: 75  TLFPCFSLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLD 134

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A  FL+ + S G  P+++ HN+++  +   G + DA  +   +L     P   TF  L+
Sbjct: 135 EAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILI 194

Query: 368 STVCLSGRFSLLPKLVCGLE------VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
           + +C  G   LL + +  LE         + + YN LL  FCK    ++A++  + M+ +
Sbjct: 195 NFLCRQG---LLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 251

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
           G  PD  ++  LL  LC   K+D A+ +   +     +     +  ++D L + G+  +A
Sbjct: 252 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERA 311

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
           I+L      +    D+++Y+  + GL   G+ +EA   +  ++ + + PNA TY  ++L 
Sbjct: 312 IKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLG 371

Query: 542 FCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLI 599
            CK R        L  +I  R +    T   L + I     +  A++ L E+C+ GL+
Sbjct: 372 LCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLV 429



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 123/268 (45%), Gaps = 4/268 (1%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           TGR+     ++ ++ R GC     TF + +    R  + G  ++  ++M   G TPN+ +
Sbjct: 165 TGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLS 224

Query: 157 RNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N ++    K  ++D  I+ L         P+ +++N  L  LCK   V    +++  + 
Sbjct: 225 YNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLS 284

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
            KG  P +  +  +++   K+G+   A +LL  M   G    +  ++ L+ G  R  ++D
Sbjct: 285 SKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVD 344

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A   +  +   G  PN +TY S++ G  +++    A  FL  + S+   P    + +LI
Sbjct: 345 EAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILI 404

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDS 360
           + ++  G   +ALD+ + L    LV  S
Sbjct: 405 EGIAYEGLAKEALDLLNELCSRGLVKKS 432



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/216 (21%), Positives = 92/216 (42%), Gaps = 6/216 (2%)

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
           + D+V YN L++  CK G  ++A+K  N M   G  P+  +   +LR +C   +  +A  
Sbjct: 114 KPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEK 173

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           +   ++    + +      +++ L   G   +AI +  +  +     + +SY   + G  
Sbjct: 174 LLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFC 233

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID---ARIEL 565
           +  + + A      M      P+  TY  +L + CK+  + +   +L  +     + + +
Sbjct: 234 KEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLI 293

Query: 566 DYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            Y+T I     + K   +  A+  L EM   GL PD
Sbjct: 294 TYNTVI---DGLSKVGKTERAIKLLDEMRRKGLKPD 326


>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
 gi|219887141|gb|ACL53945.1| unknown [Zea mays]
          Length = 522

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 115/484 (23%), Positives = 210/484 (43%), Gaps = 52/484 (10%)

Query: 130 WRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV----LKETQLPNF 185
           WR       L+ FDEM   G  PN    N ++D   K G ++ G ++    L +   PN 
Sbjct: 27  WRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNI 86

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN-----------VRMFE---------- 224
           +++N+ L  LC+   +   + ++  M     +P+            R  E          
Sbjct: 87  VTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAE 146

Query: 225 --------------ILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
                         ILLN  CK G++A+A Q+L +++  G   +   +  LI+G+ ++R 
Sbjct: 147 SLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRD 206

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           L  A  ++E+M      P+ +TY +LI G  + +M + A   +  +E  G  P +   N 
Sbjct: 207 LRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNT 266

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---- 386
           LID     G  +    V   + +  +  D  +F S++   C +G+   +P+ V  L    
Sbjct: 267 LIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGK---IPEAVAILDDMI 323

Query: 387 --EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
             +V  +  VYN+++  + ++G   QA  L   M + G +    ++  LL+GLC + +ID
Sbjct: 324 YKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQID 383

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL--DVVSYTV 502
           EA  +   +       +   +  I+      G   KA++L +   + KY +   + +Y  
Sbjct: 384 EAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQE--MNKYGIRPTLRTYHT 441

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
            +  L   GR  +   LY QM H  V P++  Y +M+ ++ +  N   V  L +++ +  
Sbjct: 442 LVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKG 501

Query: 563 IELD 566
           I  D
Sbjct: 502 IAFD 505



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/414 (22%), Positives = 189/414 (45%), Gaps = 7/414 (1%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKET----QLPNFLSFNIALCNLCKLNDVSNVKDV 207
           P+ F+ N+V+  L++ G+    +KV  E      +PN++++N  +    K  D+     +
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
              M+  G  PN+  + +LL+  C+ GR+ E   L+  M +         +++L DG  R
Sbjct: 74  RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
                    L+ + ++ G      T + L+ G  +    + A   L+ML   G  P  V 
Sbjct: 134 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 193

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE 387
           +N LI+   ++     A  +++ +    + PD  T+ +L++ +C     +    LV  +E
Sbjct: 194 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 253

Query: 388 ---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
              V+  +  +N L+  +  AG   +   + + M  KG   D  SF  +++  C   KI 
Sbjct: 254 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 313

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
           EA+ +   ++  + A NA V+ +I+D  IE+G   +A  L  +         +V+Y + +
Sbjct: 314 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLL 373

Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           +GL    + +EA  L   +++  + P+  +Y  ++ + C + +      LLQ++
Sbjct: 374 KGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEM 427



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 85/394 (21%), Positives = 178/394 (45%), Gaps = 17/394 (4%)

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
           P+   + +++    + G+ ++A ++   M+ +G   +   +  +IDG  +   L+    L
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
            ++M+ +G  PN+VTY  L+ G   A         +D + S    PD   +++L D L++
Sbjct: 74  RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133

Query: 338 MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLV---- 393
            G     L ++   L+  ++  +YT   LL+ +C  G+ +   +++  L V   LV    
Sbjct: 134 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEML-VHTGLVPTTV 192

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
           +YN L++ +C+      A  ++  M  +   PD+ ++  L+ GLC    + +A ++   +
Sbjct: 193 IYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLV--M 250

Query: 454 VMNNPAVNAHVHT--AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
            M    V+  V T   ++D    AG+  K   +      +    DV+S+   ++   + G
Sbjct: 251 EMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNG 310

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSI 571
           +  EA  +   M +  V PNA  Y  ++ ++ +  + +    L++ + ++ +      SI
Sbjct: 311 KIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVS----ASI 366

Query: 572 RLTKFIFKFHSSSSAVNQLVEMC----NLGLIPD 601
                + K    SS +++  E+     N GL PD
Sbjct: 367 VTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPD 400



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 82/390 (21%), Positives = 159/390 (40%), Gaps = 43/390 (11%)

Query: 80  FHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVL 139
           F D  ++  +   +TR TG   T+  +  E  + G ++ A T  + L    +        
Sbjct: 118 FPDGFTYSILFDGLTR-TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAE 176

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNL 195
           +  + +   G  P T   N +++   ++  +     + ++ +     P+ +++N  +  L
Sbjct: 177 QVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGL 236

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC-------------------------- 229
           CKL  V+  +D++  M + G  P+V  F  L++                           
Sbjct: 237 CKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDV 296

Query: 230 ---------FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
                    FCK G+I EA  +L  MI    + +   +  +ID +      + A  L EK
Sbjct: 297 ISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEK 356

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           M  +G S ++VTY  L+KG   +     A   +  L ++G  PD+V +N +I      G 
Sbjct: 357 MKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGD 416

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR---FSLLPKLVCGLEVEADLVVYNA 397
            D AL++   + +  + P   T+ +L+S +  +GR      L + +    VE    +Y  
Sbjct: 417 TDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGI 476

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           ++  + +    ++   L   M +KG   D+
Sbjct: 477 MVDAYVRCENDSKVASLKKEMSEKGIAFDD 506


>gi|357127090|ref|XP_003565218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Brachypodium distachyon]
          Length = 886

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 120/468 (25%), Positives = 203/468 (43%), Gaps = 42/468 (8%)

Query: 129 YWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV---LKETQL-PN 184
           + R E   M LE   +M R GF P+    + ++D L K GRV+   ++   L E ++ PN
Sbjct: 277 FCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPN 336

Query: 185 FLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLG 244
             ++N  L N+CK    S    ++  M  KG  PN   + IL++  CK G + +A  +L 
Sbjct: 337 IFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLD 396

Query: 245 LMITLGTSLSVNAWTVLIDGFRRLRRLDMA-GYLWE------------------------ 279
            M   G  ++V  +  LI+   +   LDMA G+L E                        
Sbjct: 397 RMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKG 456

Query: 280 ----------KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHN 329
                     KM + G + N  T+T+LI GF +AK    A    + +      P+ V  N
Sbjct: 457 DLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFN 516

Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE 389
            +I+    +G    A  +YD ++   L PD+YT+ SL+S +CL+   S   + V  LE  
Sbjct: 517 AVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENN 576

Query: 390 ADLV---VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
             ++      ALL  FC+ G   +A  ++N M   G   D  SF  ++         +++
Sbjct: 577 CSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKS 636

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
             +++ +       +   HT +++   + G   +A+  +   I + +  + V+YT  +  
Sbjct: 637 CVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNN 696

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
           L +      A +L  +M      PN+YT+   L  F  E N++  K L
Sbjct: 697 LCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEGNLETAKDL 744



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 102/444 (22%), Positives = 208/444 (46%), Gaps = 10/444 (2%)

Query: 105 GIVGELARVGCVIKAQTFL-LFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDV 163
           G + E+  +G    A ++  +   +  +G++ G V E   +M   G   NT+    +++ 
Sbjct: 428 GFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAV-ELHRKMAEKGVAWNTYTFTALING 486

Query: 164 LFKIGRVDLGIKV---LKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN 219
             K  ++D   ++   + E+ L PN ++FN  +   C + D+     +   M+ +G  P+
Sbjct: 487 FCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPD 546

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
              +  L++  C     ++A + +  +    + L+  + T L+ GF R  RL  A ++W 
Sbjct: 547 NYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWN 606

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
           +M   G   +++++T ++   ++      +      ++ +G  PD VFH  +I+  SK G
Sbjct: 607 EMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEG 666

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYN 396
           +   AL+ +D ++    +P++ T+ +L++ +C S   S   LL K +       +   +N
Sbjct: 667 NMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFN 726

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
             L YF   G    A  LY  ML +GF  +  S   L++G C   +I EAI++      N
Sbjct: 727 CFLDYFATEGNLETAKDLYFAML-QGFLANIVSVNTLIKGFCKVGQIQEAIDLISRSTEN 785

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
               +   ++ ++  L + G  ++AI+L+   + +    D+V+Y + IR     G +++ 
Sbjct: 786 GFFPDCISYSTVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNILIRWCNIHGESDKC 845

Query: 517 YILYSQMKHIAVPPNAYTYRVMLL 540
             +Y  M    V PN +T+R + +
Sbjct: 846 LGIYIDMVKKGVQPNWHTHRALFV 869



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 106/456 (23%), Positives = 194/456 (42%), Gaps = 48/456 (10%)

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALC-- 193
           G+V    DE  +    P     N+++  L K  RV   + V K + L   ++ +   C  
Sbjct: 218 GLVARMQDEGDKVSAVP----YNVLIYGLCKNQRVREAVDV-KNSMLARGVAADEVTCRT 272

Query: 194 ---NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
                C+  ++    ++ G M R GF P+      +L+   K GR+ EA++L   +  L 
Sbjct: 273 LVYGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELR 332

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
              ++ A+  L++   +      A  L  +M   G  PN VTY  LI    +  M   A 
Sbjct: 333 MVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDAL 392

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP------------ 358
             LD +  +G    +  +N LI+C  K    D A+     ++E+ L P            
Sbjct: 393 CMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGL 452

Query: 359 -----------------------DSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADL 392
                                  ++YTF +L++  C + +     +L   +    +E + 
Sbjct: 453 CRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNE 512

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           V +NA++  +C  G   +A +LY+ M+ +G TPDNY++  L+ GLC      +A      
Sbjct: 513 VTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVAD 572

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           +  N   +N    TA++      GR  +A  ++    +    LD++S+T+ +   L+   
Sbjct: 573 LENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHD 632

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
           +E++ +L+ +MK   V P+   +  M+  + KE N+
Sbjct: 633 SEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNM 668



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 109/549 (19%), Positives = 215/549 (39%), Gaps = 43/549 (7%)

Query: 95  RLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNT 154
           R  GR E    +  +L  +  V     +   L    +  M+       +EM   G  PN 
Sbjct: 313 RKKGRVEEAFRLACQLGELRMVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNE 372

Query: 155 FARNIVMDVLFKIGRVDLGIKVLKETQLP----NFLSFNIALCNLCKLNDVSNVKDVIGM 210
               I++  L K G +D  + +L   +          +N  +   CK +D+      +  
Sbjct: 373 VTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSE 432

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           MV  G  PN   +  ++   C+ G ++ A +L   M   G + +   +T LI+GF + ++
Sbjct: 433 MVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKK 492

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           +D A  L+ KM ++   PN VT+ ++I+G+        AF   D +   G  PD   +  
Sbjct: 493 MDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRS 552

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS------------- 377
           LI  L        A +    L     V + ++  +LL   C  GR +             
Sbjct: 553 LISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWG 612

Query: 378 -------------------------LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAV 412
                                    +L + +    V  D V +  +++ + K G   QA+
Sbjct: 613 GKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQAL 672

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
             ++ M+  G  P+  ++  L+  LC +  +  A  + + ++ ++   N++     +D  
Sbjct: 673 NCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYF 732

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
              G    A  L+  A+++ +  ++VS    I+G  + G+ +EA  L S+       P+ 
Sbjct: 733 ATEGNLETAKDLYF-AMLQGFLANIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDC 791

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVE 592
            +Y  ++   CK+ +I     L  +++   ++ D      L ++      S   +   ++
Sbjct: 792 ISYSTVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNILIRWCNIHGESDKCLGIYID 851

Query: 593 MCNLGLIPD 601
           M   G+ P+
Sbjct: 852 MVKKGVQPN 860



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/390 (21%), Positives = 176/390 (45%), Gaps = 3/390 (0%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+  + +  L +L K+   +  + +   M+  G   +  ++   +  +C++  +  A  L
Sbjct: 160 PDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLDGAKGL 219

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           +  M   G  +S   + VLI G  + +R+  A  +   M+  G + + VT  +L+ GF  
Sbjct: 220 VARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYGFCR 279

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
            +   +A      +   G  P     + ++D L K G  ++A  +   L EL++VP+ + 
Sbjct: 280 TEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFA 339

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
           + +LL+ +C +G FS   +LV  +    +E + V Y  L+   CK G  + A+ + + M 
Sbjct: 340 YNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMR 399

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
           +KG     Y +  L+   C    +D A+     +V      NA  ++ ++  L   G   
Sbjct: 400 EKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLS 459

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
            A++L R+   +    +  ++T  I G  +  + +EA  L+++M    + PN  T+  ++
Sbjct: 460 GAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVI 519

Query: 540 LSFCKERNIKMVKRLLQDVIDARIELDYHT 569
             +C   +I+   +L   ++   +  D +T
Sbjct: 520 EGYCLVGDIRKAFQLYDQMMCRGLTPDNYT 549



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/361 (23%), Positives = 149/361 (41%), Gaps = 3/361 (0%)

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
           V+ + +  G  P+      +L    K+ + A A  L   M+  G  L    +T  I  + 
Sbjct: 149 VLHLSLSAGIAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYC 208

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
            +R LD A  L  +M   G   + V Y  LI G  + +    A    + + + G A D V
Sbjct: 209 EVRNLDGAKGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEV 268

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCG- 385
               L+    +    D AL++   +  L  VP       +L  +   GR     +L C  
Sbjct: 269 TCRTLVYGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQL 328

Query: 386 --LEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
             L +  ++  YNALL+  CK G  ++A +L N M DKG  P+  ++  L+  LC    +
Sbjct: 329 GELRMVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMM 388

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           D+A+ +   +      +  + + ++++   +      A+      +      +  SY+  
Sbjct: 389 DDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPV 448

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           I GL   G    A  L+ +M    V  N YT+  ++  FCK + +    RL   + ++ +
Sbjct: 449 IAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNL 508

Query: 564 E 564
           E
Sbjct: 509 E 509



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 90/434 (20%), Positives = 166/434 (38%), Gaps = 83/434 (19%)

Query: 82  DVQSFDHMISVVTR---LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMV 138
           +  S+  +I+ + R   L+G  E  R    ++A  G      TF   +  + + +     
Sbjct: 441 NAASYSPVIAGLCRKGDLSGAVELHR----KMAEKGVAWNTYTFTALINGFCKAKKMDEA 496

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCN 194
              F++M      PN    N V++    +G +    ++  +       P+  ++   +  
Sbjct: 497 SRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISG 556

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           LC  +  S  K+ +  +       N      LL+ FC+ GR+ EAY +   M   G  L 
Sbjct: 557 LCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLD 616

Query: 255 VNAWTVLIDG-------------FRRLR----RLD------------------MAGYLWE 279
           + ++T+++               FR ++    R D                   A   W+
Sbjct: 617 LISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWD 676

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIA-------------------FSFLDMLESEG 320
           +M+ +G  PN VTYT+L+    ++   S A                     FLD   +EG
Sbjct: 677 EMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEG 736

Query: 321 H---APDLVFH------------NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
           +   A DL F             N LI    K+G   +A+D+     E    PD  ++ +
Sbjct: 737 NLETAKDLYFAMLQGFLANIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISYST 796

Query: 366 LLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
           ++  +C  G  +   +L   +    V+ D+V YN L+ +    G  ++ + +Y  M+ KG
Sbjct: 797 VIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNILIRWCNIHGESDKCLGIYIDMVKKG 856

Query: 423 FTPDNYSFVGLLRG 436
             P+ ++   L  G
Sbjct: 857 VQPNWHTHRALFVG 870



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/287 (22%), Positives = 123/287 (42%), Gaps = 3/287 (1%)

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
           S G APD    + ++  L K+  +  A  ++DG+L   ++ D Y + + +   C      
Sbjct: 155 SAGIAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLD 214

Query: 378 LLPKLVCGLEVEAD---LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
               LV  ++ E D    V YN L+   CK     +AV + N+ML +G   D  +   L+
Sbjct: 215 GAKGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLV 274

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            G C   ++D A+ +   +       +    + ++D L + GR  +A +L  +    +  
Sbjct: 275 YGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMV 334

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
            ++ +Y   +  + + G   EA  L ++M    + PN  TY +++ S CK   +     +
Sbjct: 335 PNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCM 394

Query: 555 LQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           L  + +  + +  +    L     K      A+  L EM  +GL P+
Sbjct: 395 LDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPN 441



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 64/288 (22%), Positives = 126/288 (43%), Gaps = 9/288 (3%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR      +  E+A  G  +   +F + +    +          F EM   G  P+    
Sbjct: 596 GRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFH 655

Query: 158 NIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
             ++++  K G +   +    +++ +  LPN +++   + NLCK   +S+ + +   M+ 
Sbjct: 656 TCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLA 715

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT--LGTSLSVNAWTVLIDGFRRLRRL 271
             F PN   F   L+ F   G +  A  L   M+   L   +SVN    LI GF ++ ++
Sbjct: 716 SHFLPNSYTFNCFLDYFATEGNLETAKDLYFAMLQGFLANIVSVN---TLIKGFCKVGQI 772

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
             A  L  +  +NG  P+ ++Y+++I    +    + A    + +  +G  PD+V +N+L
Sbjct: 773 QEAIDLISRSTENGFFPDCISYSTVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNIL 832

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
           I   +  G  D  L +Y  +++  + P+ +T  +L     L  + + L
Sbjct: 833 IRWCNIHGESDKCLGIYIDMVKKGVQPNWHTHRALFVGTSLMSKGNTL 880


>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
          Length = 1263

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/412 (25%), Positives = 188/412 (45%), Gaps = 20/412 (4%)

Query: 210 MMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLR 269
           +M   G   N   +  L+    K G   EA ++  +M+  G   SV  ++VL+  F + R
Sbjct: 275 VMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRR 334

Query: 270 RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHN 329
            ++   +L  +M  +G  PNV +YT  I+   +AK F  A+  L  +E+EG  PD++ H 
Sbjct: 335 DVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHT 394

Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE 389
           VLI  L   G   DA DV+  + +    PD  T+ +LL     +G    + ++   ++ +
Sbjct: 395 VLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKAD 454

Query: 390 A---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
               ++V Y A++   C+ G   +A+++++ M  KG  P+ YS+  L+ G   A +  +A
Sbjct: 455 GYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDA 514

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
           + +++ + ++ P  N + H   ++   ++G   KAIQ +     +    DVV+    + G
Sbjct: 515 LELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFG 574

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           L + GR   A  ++ ++K + V P+  TY +M+    K        ++  D+I+     D
Sbjct: 575 LAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPD 634

Query: 567 YHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTPV 618
                              AVN L++        DE WR    L +  + P 
Sbjct: 635 V-----------------LAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPT 669



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 108/468 (23%), Positives = 218/468 (46%), Gaps = 7/468 (1%)

Query: 141 AFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLC 196
           A   M   G   N +  N ++  L K G     ++V +    +  +P+  ++++ +    
Sbjct: 272 ALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFG 331

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
           K  DV  V  ++  M   G  PNV  + I +    +  R  EAY++L  M   G    V 
Sbjct: 332 KRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVI 391

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
             TVLI       R+  A  ++ KM ++   P+ VTY +L+  F +           + +
Sbjct: 392 THTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAM 451

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
           +++G+  ++V +  +ID L ++G   +AL+++D + +  +VP+ Y++ SL+S    + RF
Sbjct: 452 KADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRF 511

Query: 377 SLLPKLVCGLEV---EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
               +L   +++   + +   +   ++Y+ K+G   +A++ Y  M  KG  PD  +   +
Sbjct: 512 GDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAV 571

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           L GL  + ++  A  V+  +     + +   +T ++    +A +  +A+++F   I    
Sbjct: 572 LFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNC 631

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
             DV++    I  L + GR +EA+ ++ Q+K + + P   TY  +L    +E  +K V  
Sbjct: 632 VPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMH 691

Query: 554 LLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           LL+++  +    +  T   +   + K  + + A++ L  M   G IPD
Sbjct: 692 LLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPD 739



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 134/619 (21%), Positives = 249/619 (40%), Gaps = 116/619 (18%)

Query: 97   TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
            +GR    + +  EL  +G      T+ + ++   +   +   ++ F +M      P+  A
Sbjct: 578  SGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLA 637

Query: 157  RNIVMDVLFKIGRVDLGIKV---LKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
             N ++D L+K GR D   ++   LKE  L P   ++N  L  L +   V  V  ++  M 
Sbjct: 638  VNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMY 697

Query: 213  RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
               + PN+  +  +L+C CK G + +A  +L  M T G    ++++  +I G  +  R +
Sbjct: 698  HSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYN 757

Query: 273  MA----------------------------GYLWEKM-------VQNGCSPNVVTYTSLI 297
             A                            G + E +       +Q G   +  +  SL+
Sbjct: 758  EAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLM 817

Query: 298  KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM------------------- 338
            +G ++      +  F +++ S G   D  F   LI  L K                    
Sbjct: 818  EGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVS 877

Query: 339  ---GSY---------DDALDVYDGLL----ELKLVPDSYTFCSLLSTVCLSGRFSLLPKL 382
               G Y         ++ +D+ +GL     EL   PD +T+  LL  +  S R   + K+
Sbjct: 878  LKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKV 937

Query: 383  VCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
               +     E+  V YN ++S   K+    QA+ LY  ++ +GF+P   ++  LL GL  
Sbjct: 938  QEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLK 997

Query: 440  ARKIDEAINVYQ--------------GIVMN-----------------------NPAVNA 462
            A +I++A N++                I++N                       NP + +
Sbjct: 998  AGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKS 1057

Query: 463  HVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQ 522
              +T I+D L +AG+ +  +  FR+ +      D+++Y + I GL +  R EEA  L+++
Sbjct: 1058 --YTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNE 1115

Query: 523  MKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHS 582
            M+   + PN YTY  ++L   K        ++ ++++    + +  T   L +      S
Sbjct: 1116 MQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGS 1175

Query: 583  SSSAVNQLVEMCNLGLIPD 601
            + SA      M   G +P+
Sbjct: 1176 TDSAYAAYGRMIVGGCLPN 1194



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 154/321 (47%), Gaps = 9/321 (2%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALC 193
           V+E ++ M   G+  N  A   V+D L ++GRV   +++  E +    +P   S+N  + 
Sbjct: 444 VMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLIS 503

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
              K +   +  ++   M   G  PN     + +N + K G   +A Q   LM + G   
Sbjct: 504 GFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVP 563

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS-F 312
            V A   ++ G  +  RL MA  ++ ++   G SP+ +TYT +IK   +A  F  A   F
Sbjct: 564 DVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIF 623

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
            DM+E+    PD++  N LID L K G  D+A  ++  L E+ L P   T+ +LL+ +  
Sbjct: 624 YDMIENN-CVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGR 682

Query: 373 SGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
            G+   +  L+  +       +L+ YN +L   CK G  N A+ +  +M  KG  PD  S
Sbjct: 683 EGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSS 742

Query: 430 FVGLLRGLCGARKIDEAINVY 450
           +  ++ GL    + +EA +++
Sbjct: 743 YNTVIYGLVKEERYNEAFSIF 763



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 110/541 (20%), Positives = 231/541 (42%), Gaps = 15/541 (2%)

Query: 71  IWCAKQRDYFHD-VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIY 129
           IW A + D ++D V ++  +I  + ++   FE +  +  E+ + G V +  ++   +  +
Sbjct: 447 IWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALE-MFDEMKQKGIVPEQYSYNSLISGF 505

Query: 130 WRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL------- 182
            + + +G  LE F  M   G  PN +   + ++   K G     IK ++  +L       
Sbjct: 506 LKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGE---SIKAIQRYELMKSKGIV 562

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+ ++ N  L  L K   +   K V   +   G  P+   + +++ C  K  +  EA ++
Sbjct: 563 PDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKI 622

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
              MI       V A   LID   +  R D A  ++ ++ +    P   TY +L+ G   
Sbjct: 623 FYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGR 682

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
                     L+ +    + P+L+ +N ++DCL K G+ +DALD+   +     +PD  +
Sbjct: 683 EGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSS 742

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGLE--VEADLVVYNALLSYFCKAGFPNQAVK-LYNTML 419
           + +++  +    R++    + C ++  +  D      +L  F K G   +A+  + +  L
Sbjct: 743 YNTVIYGLVKEERYNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFL 802

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
             G   D  S   L+ G+     I+++I   + I  +   ++      ++  L +  +  
Sbjct: 803 QPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKAL 862

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
           +A +L ++       L    Y   I GL++    + A  L+++MK +   P+ +TY ++L
Sbjct: 863 EAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLL 922

Query: 540 LSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLI 599
            +  K   I+ + ++ +++     E  Y T   +   + K      A++    + + G  
Sbjct: 923 DAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFS 982

Query: 600 P 600
           P
Sbjct: 983 P 983



 Score = 43.1 bits (100), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 39/186 (20%), Positives = 80/186 (43%)

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
           V+A++  + A+       G    A      M + G   + Y++ GL+  L  +    EA+
Sbjct: 246 VKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREAL 305

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            VY+ ++++    +   ++ ++    +       + L R         +V SYT+ IR L
Sbjct: 306 EVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVL 365

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
            +  R +EAY + ++M++    P+  T+ V++   C    I   K +   +  +  + D 
Sbjct: 366 GQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDR 425

Query: 568 HTSIRL 573
            T I L
Sbjct: 426 VTYITL 431


>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
          Length = 792

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 123/500 (24%), Positives = 219/500 (43%), Gaps = 42/500 (8%)

Query: 109 ELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIG 168
           E+   GC   A+ + + +R   RG M+   +  FDEM   G  P+               
Sbjct: 175 EMRGKGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAGVKPDE-------------- 220

Query: 169 RVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLN 228
           RV                 + I +  LCKL D      V+G M   GF P    +  +++
Sbjct: 221 RV-----------------YAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVD 263

Query: 229 CFCKMGRIAEAYQLLG-LMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCS 287
              K+GR+ EA +L   +++  G  + V   T+L+ G+     +  A  L++++V +G +
Sbjct: 264 VLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEVVSDGVT 323

Query: 288 PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
           P  VTY  LIKG     M    +     +  +G        N++I  L +   + DA+  
Sbjct: 324 PTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAI-- 381

Query: 348 YDGLLELKL---VPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSY 401
             GLLEL +   VPD +T+  L+  +C   +      L   ++   V+  +V Y++LL  
Sbjct: 382 --GLLELVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLG 439

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVN 461
           +C+ G  ++A+KLY+ M DKGF P+  ++  L++G    +  D A  +   +  N  +  
Sbjct: 440 YCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCG 499

Query: 462 AHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYS 521
            + +  +++ L    R  +  ++ +R + E +    ++Y   I G ++ G    A+ +Y 
Sbjct: 500 DYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYR 559

Query: 522 QMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFH 581
           QM+   + PN  TY   +  +C+     +  +LL  V    I+ D            K  
Sbjct: 560 QMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQG 619

Query: 582 SSSSAVNQLVEMCNLGLIPD 601
           + S A++ LV +   GL PD
Sbjct: 620 NMSRALHFLVLLLKDGLTPD 639



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 103/417 (24%), Positives = 180/417 (43%), Gaps = 10/417 (2%)

Query: 136 GMVLEAFD---EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK---ETQLPNFLSFN 189
           GM  E +    +M   G   +T+  N+V+  L +  R    I +L+   +T +P+  ++ 
Sbjct: 340 GMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIGLLELVVDTGVPDVFTYG 399

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
             +  LCK   +    ++   M   G  P++  +  LL  +C+ GR+ EA +L   M   
Sbjct: 400 CLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDK 459

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           G   +   +T L+ G+ + +  D A  L  +M QNG S    TY  LI G          
Sbjct: 460 GFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEV 519

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
              L    SEG  P  + +N +I+   K G    A  +Y  + +  + P+  T+ S +  
Sbjct: 520 DEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDG 579

Query: 370 VCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
            C +    L  KL+  +    ++ D+  YNA +  FCK G  ++A+     +L  G TPD
Sbjct: 580 YCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPD 639

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
              +   + G    + + EA   Y  ++      +  ++T ++D   + G    A++L+ 
Sbjct: 640 VTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYS 699

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
             +      D  ++T    GL   G  + A  L   M+ + V PN  TY  ML++ C
Sbjct: 700 EMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYN-MLINAC 755



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/340 (22%), Positives = 157/340 (46%), Gaps = 7/340 (2%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR +    +  E+   G      T+   ++ Y + + +       +EM + G +   +  
Sbjct: 444 GRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTY 503

Query: 158 NIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           NI+++ L+ + RV    ++  + L E  +P  +++N  +    K   + +   +   M +
Sbjct: 504 NILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRK 563

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           KG  PN+  +   ++ +C+      A +LL  +   G    + A+   ID F +   +  
Sbjct: 564 KGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSR 623

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A +    ++++G +P+V  Y S + G+   KM + A  F   +  +    D   +  LID
Sbjct: 624 ALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLID 683

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCG---LEVEA 390
             SK+G+   AL++Y  ++   ++PD  TF +L   +C SG      +L+     L+V  
Sbjct: 684 GFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSP 743

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           ++V YN L++   + G   +A +L++ ML  G  PD+ ++
Sbjct: 744 NIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTY 783



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 95/404 (23%), Positives = 170/404 (42%), Gaps = 42/404 (10%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           +D+M   G  P+    + ++    + GR+D  +K+  E       PN +++   +    K
Sbjct: 418 WDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIK 477

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
                N   ++  M + G       + IL+N    + R+ E  ++L   ++ G   +   
Sbjct: 478 KKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMT 537

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  +I+GF +   +  A  ++ +M + G +PN+VTYTS I G+       +A   L  + 
Sbjct: 538 YNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVR 597

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS---TVCLSG 374
            +G  PD+  +N  ID   K G+   AL     LL+  L PD   + S ++    + +  
Sbjct: 598 RDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMA 657

Query: 375 RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
             S     +    V AD  +Y  L+  F K G    A++LY+ M+     PD+ +F  L 
Sbjct: 658 EASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALT 717

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            GLC +  ID A                        RL++           RR  V    
Sbjct: 718 HGLCRSGDIDGA-----------------------KRLLDD---------MRRLDVSP-- 743

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            ++V+Y + I   +  G+ +EA+ L+ +M    V P+  TY ++
Sbjct: 744 -NIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 95/421 (22%), Positives = 178/421 (42%), Gaps = 56/421 (13%)

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M  KG Y + +M+++++    + G   +A +L   M   G       + + I G  +LR 
Sbjct: 176 MRGKGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRD 235

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD-MLESEGHAPDLVFHN 329
            D A  +  KM + G  P  +TY+S++   ++      A    D ML + G   D+V   
Sbjct: 236 ADRALQVLGKMREAGFEPWELTYSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLAT 295

Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE 389
           +L+      G    ALD++D ++   + P + T+  L+                 G + E
Sbjct: 296 MLMHGYCLHGEVGKALDLFDEVVSDGVTPTNVTYGVLIK----------------GCDAE 339

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
                           G  ++  KL   M+++G     Y F  +++GL   ++  +AI +
Sbjct: 340 ----------------GMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIGL 383

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
            + +V++    +   +  ++  L +  + H+A+ L+ +         +V+Y   + G  E
Sbjct: 384 LE-LVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCE 442

Query: 510 GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL-DYH 568
            GR +EA  LYS+M     PPN  TY  ++  + K++       LL ++    +   DY 
Sbjct: 443 KGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYT 502

Query: 569 TSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSD----ETMTPVSLFDGF 624
            +I +             VN++ E+       DEM ++   LS+     TMT  S+ +GF
Sbjct: 503 YNILINGLYM--------VNRVCEV-------DEMLKR--FLSEGFVPTTMTYNSIINGF 545

Query: 625 V 625
           V
Sbjct: 546 V 546



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/257 (21%), Positives = 99/257 (38%), Gaps = 39/257 (15%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG 173
           G V    T+   +  + +  M G     + +M + G TPN       +D   +    DL 
Sbjct: 530 GFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLA 589

Query: 174 IKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
           +K+L    ++   P+  ++N  +   CK  ++S     + ++++ G  P+V ++   +  
Sbjct: 590 VKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTG 649

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN----- 284
           +  +  +AEA +    MI          +T LIDGF ++  +  A  L+ +M+ N     
Sbjct: 650 YKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPD 709

Query: 285 ------------------------------GCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
                                           SPN+VTY  LI   +       AF   D
Sbjct: 710 DKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHD 769

Query: 315 MLESEGHAPDLVFHNVL 331
            + S G  PD   +++L
Sbjct: 770 EMLSSGVVPDDTTYDIL 786


>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 452

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/383 (24%), Positives = 182/383 (47%), Gaps = 9/383 (2%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG------RI 236
           P    F     +L K+N    V  +   M  +G   ++    IL+NCFC +G      ++
Sbjct: 6   PTIFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVCLNDKV 65

Query: 237 AEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSL 296
            E       +I  G  L+  ++  LIDG  +      A  +   +      PNVV Y+++
Sbjct: 66  KETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTI 125

Query: 297 IKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
           I    + K+   AF     +  +  +PD++ +N L+     +G   +A+ +++ +L   +
Sbjct: 126 IYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNI 185

Query: 357 VPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVK 413
            PD YTF  L+  +C  G       ++  +    V+ D++ YN+L+  +      N+A  
Sbjct: 186 KPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATF 245

Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
           ++NTM  +G TPD +S+  ++ GLC  + +DEA+N+ + +   + A N   +++++D L 
Sbjct: 246 VFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLH 305

Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
           ++GR   A  L         P DV++Y   +  L +  + ++A  L +++K   + P+ Y
Sbjct: 306 KSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIY 365

Query: 534 TYRVMLLSFCKERNIKMVKRLLQ 556
           TY +++   CK   +K  + + Q
Sbjct: 366 TYTILVDGLCKNGRLKDAQEVYQ 388



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 95/420 (22%), Positives = 196/420 (46%), Gaps = 40/420 (9%)

Query: 62  SDLIALSFFIWC------------AKQRDYFHD---VQSFD-HMISVVTRLTG--RFETV 103
           +DL+ L+  + C             K+  +FHD    + F  + +S  T + G  +    
Sbjct: 41  TDLVNLNILVNCFCHLGQVCLNDKVKETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGET 100

Query: 104 RGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFD---EMGRFGFTPNTFARNIV 160
           R  +  L  +  ++     +++  I +      +V++AFD   +M     +P+    N +
Sbjct: 101 RAAMQVLRNIDGLLVQPNVVMYSTIIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTL 160

Query: 161 MDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
           M     +GR+   + +  +  L    P+  +FNI +  LCK  ++   ++V+ +M+++  
Sbjct: 161 MYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSV 220

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
            P+V  +  L++ +  + +  +A  +   M   G +  V++++V+I+G  + + +D A  
Sbjct: 221 DPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVN 280

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           L ++M     +PN VTY+SLI G  ++     A+  ++ + + G   D++ +N L+D L 
Sbjct: 281 LLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALC 340

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYN 396
           K    D A+ +   + +  + PD YT+  L+  +C +GR     +            VY 
Sbjct: 341 KNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGLCKNGRLKDAQE------------VYQ 388

Query: 397 ALL--SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
            LL   Y   + F ++A+ L + M D G TP+  +F  L+R L      D+A+ + + ++
Sbjct: 389 ILLIKGYHLDSLF-DKALSLLSKMEDNGCTPNPVTFEILIRALFENDMNDKAVELLREMI 447



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 60/284 (21%), Positives = 128/284 (45%), Gaps = 9/284 (3%)

Query: 284 NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS--- 340
           N  +P +  +  +    ++   F    S    +E  G   DLV  N+L++C   +G    
Sbjct: 2   NNPTPTIFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVCL 61

Query: 341 ---YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVV 394
                + L  +D ++      +  ++ +L+  +C +G      ++   + GL V+ ++V+
Sbjct: 62  NDKVKETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVM 121

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           Y+ ++   CK      A  LY+ ML K  +PD  ++  L+ G     ++ EA+ ++  ++
Sbjct: 122 YSTIIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQML 181

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
           + N   + +    +VD L + G   KA  +    I +    DV++Y   + G     +  
Sbjct: 182 LKNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQEN 241

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           +A  +++ M    V P+ ++Y VM+   CK + +     LL+++
Sbjct: 242 KATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEM 285



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 95/219 (43%), Gaps = 18/219 (8%)

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           +   +AR G      ++ + +    + +M    +    EM      PNT   + ++D L 
Sbjct: 246 VFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLH 305

Query: 166 KIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
           K GR+    DL  ++    Q  + +++N  L  LCK + V     ++  +  +G  P++ 
Sbjct: 306 KSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIY 365

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            + IL++  CK GR+ +A ++  ++              LI G+      D A  L  KM
Sbjct: 366 TYTILVDGLCKNGRLKDAQEVYQIL--------------LIKGYHLDSLFDKALSLLSKM 411

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
             NGC+PN VT+  LI+   E  M   A   L  + + G
Sbjct: 412 EDNGCTPNPVTFEILIRALFENDMNDKAVELLREMIARG 450


>gi|15219974|ref|NP_173709.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806406|sp|P0C7Q9.1|PPR56_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g22960, mitochondrial; Flags: Precursor
 gi|332192194|gb|AEE30315.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 718

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 148/575 (25%), Positives = 247/575 (42%), Gaps = 44/575 (7%)

Query: 65  IALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETV----RGI------VGELARVG 114
           IA  FF W  +Q D     Q+F  M+ ++       E      R I      + +L   G
Sbjct: 101 IAFRFFNWIQRQSDVKQSRQAFAAMLEILAENDLMSEAYLVAERSIDLGMHEIDDLLIDG 160

Query: 115 CVIKAQTFLLFLRIYW---RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD 171
              K     L   + W   +  M    L +F++M R GF P+    NIV+ VL +  R+ 
Sbjct: 161 SFDKLIALKLLDLLLWVYTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVL-RDSRMM 219

Query: 172 LGIKVLKETQ-----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEIL 226
                + ET      +P  ++FN  L +  K  D+  V  +   M R+    +   + IL
Sbjct: 220 NKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNIL 279

Query: 227 LNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGC 286
           +N F K G++ EA +  G M   G +++  ++  LI+G+ +    D A  + ++M+  G 
Sbjct: 280 INGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGI 339

Query: 287 SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALD 346
            P   TY   I    +      A   L    S   APD+V +N L+    KMG + +A  
Sbjct: 340 YPTTSTYNIYICALCDFGRIDDARELL----SSMAAPDVVSYNTLMHGYIKMGKFVEASL 395

Query: 347 VYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE---ADLVVYNALLSYFC 403
           ++D L    + P   T+ +L+  +C SG      +L   +  +    D++ Y  L+  F 
Sbjct: 396 LFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFV 455

Query: 404 KAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV-MNNPAVNA 462
           K G  + A ++Y+ ML KG  PD Y++     G       D+A  +++ +V  ++ A + 
Sbjct: 456 KNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDL 515

Query: 463 HVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQ 522
            ++   +D L + G   KAI+  R+        D V+YT  IRG LE G+ + A  LY +
Sbjct: 516 TIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDE 575

Query: 523 MKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHS 582
           M    + P+  TY V++    K                 R+E  +  S  + K   + + 
Sbjct: 576 MLRKRLYPSVITYFVLIYGHAKA---------------GRLEQAFQYSTEMKKRGVRPNV 620

Query: 583 SSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTP 617
            +     L  MC  G I DE +R L  + +E + P
Sbjct: 621 MTHNA-LLYGMCKAGNI-DEAYRYLCKMEEEGIPP 653



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 104/448 (23%), Positives = 196/448 (43%), Gaps = 12/448 (2%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF----LSFNIALCNLCKLN 199
           EM R     +    NI+++   K G+++   +   + +   F     SFN  +   CK  
Sbjct: 263 EMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQG 322

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
              +   V   M+  G YP    + I +   C  GRI +A +LL  M     +  V ++ 
Sbjct: 323 LFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVSYN 378

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
            L+ G+ ++ +   A  L++ +      P++VTY +LI G  E+     A    + + ++
Sbjct: 379 TLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQ 438

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR---- 375
              PD++ +  L+    K G+   A +VYD +L   + PD Y + +        G     
Sbjct: 439 LIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKA 498

Query: 376 FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
           F L  ++V       DL +YN  +   CK G   +A++    +   G  PD+ ++  ++R
Sbjct: 499 FRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIR 558

Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
           G     +   A N+Y  ++      +   +  ++    +AGR  +A Q            
Sbjct: 559 GYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRP 618

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
           +V+++   + G+ + G  +EAY    +M+   +PPN Y+Y +++   C     + V +L 
Sbjct: 619 NVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLY 678

Query: 556 QDVIDARIELDYHTSIRLTKFIFKFHSS 583
           ++++D  IE D +T   L K + K H S
Sbjct: 679 KEMLDKEIEPDGYTHRALFKHLEKDHES 706



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 117/493 (23%), Positives = 213/493 (43%), Gaps = 44/493 (8%)

Query: 71  IWCA-KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIY 129
           IW   K+R+      +++ +I+  ++  G+ E  R   G++ R G  +   +F   +  Y
Sbjct: 260 IWLEMKRRNIEFSEVTYNILINGFSK-NGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGY 318

Query: 130 WRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFN 189
            +  ++       DEM   G  P T   NI +  L   GR+D   ++L     P+ +S+N
Sbjct: 319 CKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYN 378

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
             +    K+        +   +     +P++  +  L++  C+ G +  A +L   M T 
Sbjct: 379 TLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQ 438

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
                V  +T L+ GF +   L MA  ++++M++ G  P+   YT+   G +       A
Sbjct: 439 LIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKA 498

Query: 310 FSF-LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           F    +M+ ++ HAPDL  +NV ID L K+G+   A++    +  + LVPD  T+ +++ 
Sbjct: 499 FRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIR 558

Query: 369 TVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
               +G+F +   L   +    +   ++ Y  L+    KAG   QA +    M  +G  P
Sbjct: 559 GYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRP 618

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           +  +   LL G+C A  IDEA   Y+ +                 ++ E G         
Sbjct: 619 NVMTHNALLYGMCKAGNIDEA---YRYLC----------------KMEEEG--------- 650

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
                   P +  SYT+ I    +  + EE   LY +M    + P+ YT+R +     K+
Sbjct: 651 -------IPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKD 703

Query: 546 ---RNIKMVKRLL 555
              R ++ ++RLL
Sbjct: 704 HESREVEFLERLL 716


>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/407 (26%), Positives = 185/407 (45%), Gaps = 46/407 (11%)

Query: 144 EMGRFGFTPNTFARNIVMDVLF--KIGRVDLGIKVLKE----TQLPNFLSFNIALCNLCK 197
           +M  F   P+  + N ++DVL+  + G+ D  I  L E      +P+ +++N  +   C+
Sbjct: 217 KMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGLVPHQITYNTIIHGYCR 276

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              V         MV K F P++    ILL   C  G +  A +L    I+ G ++    
Sbjct: 277 EGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVT 336

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK-MFSIAFSFLDML 316
           +  +I G  +  R + A  L  +M +    P+  TY +++    +A+     AF F + +
Sbjct: 337 YNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFRNKM 396

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
             +   PDL   N+L+  L   G  D+AL +++  +      D+ T+ +++S +C  GRF
Sbjct: 397 VEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRF 456

Query: 377 SLLPKLVCGLEVEADLV----VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
                L+  +E +  LV     YN ++  +C+ G   +A +  N M++K F PD ++   
Sbjct: 457 EEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNI 516

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           LLRGLC            +G+++                        KA++LF   I + 
Sbjct: 517 LLRGLC-----------REGMLV------------------------KALKLFNTWISKG 541

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
             +D V+Y   I GL + GR EEA+ L ++MK   + P+ YTY  +L
Sbjct: 542 KAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAIL 588



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 107/439 (24%), Positives = 192/439 (43%), Gaps = 20/439 (4%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLN 199
           + F+ M R    PN   RN +++ L +          L +    N + F +        N
Sbjct: 156 QIFNRMKRLHLKPNLLTRNTLINALVRYPSKP--SVCLSKAIFTNVIKFGVK-------N 206

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCF--CKMGRIAEAYQLLGLMITLGTSLSVNA 257
            +S    +IG M     +P+   +  +L+    C+ G+  ++   L  ++  G       
Sbjct: 207 KLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGLVPHQIT 266

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  +I G+ R  +++ A     KMV+    P++ T   L++G     M   A    +   
Sbjct: 267 YNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWI 326

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC-----L 372
           S+G A D V +N +I  L K G +++A D+   + E KL PD YT+ ++L  +      +
Sbjct: 327 SKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQV 386

Query: 373 SGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
              F    K+V     + DL   N LL   C  G  + A+KL+NT + KG   D  ++  
Sbjct: 387 EKAFQFRNKMV-EKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNT 445

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAV-NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
           ++ GLC   + +EA ++   +   N  V +   +  I+      G+  KA Q FR  +VE
Sbjct: 446 IISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQ-FRNKMVE 504

Query: 492 K-YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
           K +  D+ +  + +RGL   G   +A  L++         +A TY  ++   CKE   + 
Sbjct: 505 KSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEE 564

Query: 551 VKRLLQDVIDARIELDYHT 569
              LL ++ + ++  D +T
Sbjct: 565 AFDLLAEMKEKKLGPDCYT 583


>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 117/477 (24%), Positives = 219/477 (45%), Gaps = 19/477 (3%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALC 193
            LE    M   G  P+     I+  +L ++G       L   V++    P   +F+  + 
Sbjct: 5   ALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIIL 64

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
             C+   +   + ++ +M +    PN   + I++N  C  GR ++A     LMI  G + 
Sbjct: 65  GFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNP 124

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
           +V  +  +I+ F +   +  A  L++ + + G SPN + Y +L+ G+++ +    A    
Sbjct: 125 TVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLY 184

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           + +  +G APD +  N+L+    K G  +D   +   +  L L+PD   F   +S +C +
Sbjct: 185 EEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWA 244

Query: 374 GRFS-----LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
           GR       L+  L  GL     ++ +N++++ + +AG  ++A + Y  M+  G TP   
Sbjct: 245 GRLDEAMEFLMDMLEKGL--SPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPS 302

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF--- 485
           +   LL GL    ++ EA  +   ++    +VN    T ++D+  + G    A  L+   
Sbjct: 303 TCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEM 362

Query: 486 -RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
            RR I   +P DVV+++  I GL + G  EEAY ++ +M    + PN + Y  ++  FCK
Sbjct: 363 ERRGI---FP-DVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCK 418

Query: 545 ERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
              +    +L + +    +  D  T+  +   + K     SA+N  ++M   GL PD
Sbjct: 419 CGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPD 475



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 124/538 (23%), Positives = 223/538 (41%), Gaps = 83/538 (15%)

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           I+G +  VG    A    +  ++  R   YG V + F ++ R G  P  +  + ++    
Sbjct: 8   ILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFC 67

Query: 166 KIGRVDLGIKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
           + G + LG  +L    K    PN  ++NI +   C     S+      +M+ +G  P V 
Sbjct: 68  RKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVV 127

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            F  ++N FCK G + EA +L   +  +G S +   +  L++G+ ++R +D A  L+E+M
Sbjct: 128 TFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEM 187

Query: 282 VQNGCSPNVVTYTSLIKG----------------------FMEAKMFSIAFS-------- 311
            + G +P+ +T+  L+ G                        +  +F I+ S        
Sbjct: 188 RKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRL 247

Query: 312 ------FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
                  +DMLE +G +P ++  N +I   S+ G  D A + Y  ++   L P   T  S
Sbjct: 248 DEAMEFLMDMLE-KGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSS 306

Query: 366 LLSTVCLSGRFSLLPKLVC-----GLEVE------------------------------- 389
           LL  + ++GR     +L+      GL V                                
Sbjct: 307 LLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRG 366

Query: 390 --ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
              D+V ++A +    K G   +A  ++  ML KG  P+N+++  L+ G C   K++EA+
Sbjct: 367 IFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEAL 426

Query: 448 NVYQGIVMNNPAVNAHVHTA--IVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
            + +  VM +  +   + T   I+  L + GR   AI +F          D+++Y   I 
Sbjct: 427 KLEK--VMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLIN 484

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           G  +      A  L ++M      P+  TY + +  FC  R +     +L +++ A I
Sbjct: 485 GYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGI 542



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 95/377 (25%), Positives = 171/377 (45%), Gaps = 57/377 (15%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           ++EM + G  P+    NI++   +K GR + G ++LK+      LP+   F+I++  LC 
Sbjct: 184 YEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCW 243

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG----------------------- 234
              +    + +  M+ KG  P++  F  ++  + + G                       
Sbjct: 244 AGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPST 303

Query: 235 ------------RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAG--YLWEK 280
                       R+ EA +L+G MI  G S++  A+TVL+D F   +R D+ G   LW +
Sbjct: 304 CSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKF--FKRGDVVGAQSLWGE 361

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS-FLDMLESEGHAPDLVFHNVLIDCLSKMG 339
           M + G  P+VV +++ I G  +  +   A++ FL+ML  +G  P+   +N LI    K G
Sbjct: 362 MERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLR-KGLIPNNFAYNSLICGFCKCG 420

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYN 396
             ++AL +   +    L+PD +T   ++  +C  GR      +   +    +  D++ YN
Sbjct: 421 KLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYN 480

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            L++ +CKA     A  L N M   G  PD  ++   + G C +R+++ A+ +   +V  
Sbjct: 481 TLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSA 540

Query: 457 N---------PAVNAHV 464
                     P +NAH 
Sbjct: 541 GILSFSFACPPTLNAHT 557



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 80/370 (21%), Positives = 157/370 (42%), Gaps = 9/370 (2%)

Query: 238 EAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE---KMVQNGCSPNVVTYT 294
           +A ++LG M  +G   S +   +L   F+ L R+   G +W+    +++ G  P   T++
Sbjct: 4   QALEILGRMREVGVRPSASGVAIL---FKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFS 60

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
            +I GF       +  S L ++      P+   +N++I+     G   DAL  ++ ++E 
Sbjct: 61  GIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIER 120

Query: 355 KLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQA 411
              P   TF ++++  C  G      KL  GL+      + ++YN L++ + K    +QA
Sbjct: 121 GCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQA 180

Query: 412 VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
             LY  M  KG  PD  +F  L+ G     + ++   + + I +     +  +    V  
Sbjct: 181 NMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSG 240

Query: 472 LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
           L  AGR  +A++     + +     ++++   I    + G  ++A+  Y  M H  + P+
Sbjct: 241 LCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPS 300

Query: 532 AYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLV 591
             T   +L+       ++    L+  +I+  + ++      L    FK      A +   
Sbjct: 301 PSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWG 360

Query: 592 EMCNLGLIPD 601
           EM   G+ PD
Sbjct: 361 EMERRGIFPD 370



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 111/234 (47%), Gaps = 7/234 (2%)

Query: 136 GMVLEAFDEMGRF---GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSF 188
           G + EA + +G+    G + N  A  +++D  FK G V     +  E +     P+ ++F
Sbjct: 315 GRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAF 374

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           +  +  L K   V    +V   M+RKG  PN   +  L+  FCK G++ EA +L  +M  
Sbjct: 375 SAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRH 434

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
            G    +    ++I G  +  R+  A  ++  M Q G SP+++TY +LI G+ +A     
Sbjct: 435 RGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVN 494

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
           A + ++ + + G  PDL  +N+ I         + A+ + D L+   ++  S+ 
Sbjct: 495 ADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGILSFSFA 548


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 113/502 (22%), Positives = 224/502 (44%), Gaps = 16/502 (3%)

Query: 112 RVGCVIKAQTFLLFLRIYW-----RGEMYGMVLEAFDEMGRFGFTP-NTFARNIVMDVLF 165
           RV  V K++   +  R+        G++ G+ +E+    G  G      FA NI +  L 
Sbjct: 59  RVSAVSKSEASGMNGRLQQIVSTPNGDLNGIGMESSSPNGVNGSRSFEEFASNIHLRKLV 118

Query: 166 KIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
           + G ++ G+K L+    +  +P+ ++    +   C+         ++ ++   G  P+V 
Sbjct: 119 RNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVI 178

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            + +L+  +CK G I +A Q+L  M     +  V  +  ++       +L  A  + ++ 
Sbjct: 179 TYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQ 235

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
           +Q  C P+V+TYT LI+          A   LD +  +G  PD+V +NVLI+ + K G  
Sbjct: 236 MQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRL 295

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNAL 398
           D+A+   + +      P+  T   +L ++C +GR+    +L+  +        +V +N L
Sbjct: 296 DEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNIL 355

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           +++ C+     +A+ +   M   G  P++ S+  LL G C  +K+D AI   + +V    
Sbjct: 356 INFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGC 415

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
             +   +  ++  L + G+   A+++  +   +     +++Y   I GL + G+TE A  
Sbjct: 416 YPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAE 475

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
           L  +M+   + P+  TY  +L     E  +    ++  D+    I+    T   +   + 
Sbjct: 476 LLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLC 535

Query: 579 KFHSSSSAVNQLVEMCNLGLIP 600
           K   +S A++ L  M   G  P
Sbjct: 536 KAQQTSRAIDFLAYMVEKGCKP 557



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 170/348 (48%), Gaps = 7/348 (2%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           +G+ +    ++    +  C     T+ + +         G  ++  DEM + G  P+   
Sbjct: 222 SGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVT 281

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N++++ + K GR+D  IK L    L    PN ++ NI L ++C      + + ++  M+
Sbjct: 282 YNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADML 341

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
           RKG  P+V  F IL+N  C+   +  A  +L  M   G   +  ++  L+ GF + +++D
Sbjct: 342 RKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMD 401

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A    E MV  GC P++VTY +L+    +      A   L+ L S+G +P L+ +N +I
Sbjct: 402 RAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVI 461

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVE 389
           D L+K+G  + A ++ + +    L PD  T+ +LL  +   G+     K+   + GL ++
Sbjct: 462 DGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIK 521

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
              V YNA++   CKA   ++A+     M++KG  P   ++  L+ G+
Sbjct: 522 PSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGI 569



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/207 (23%), Positives = 90/207 (43%), Gaps = 5/207 (2%)

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
           N  L    + G   + +K    M+ +G  PD  +   L+RG C + K  +A  + + I+ 
Sbjct: 111 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIME-ILE 169

Query: 456 NNPAV-NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
           N+ AV +   +  ++    ++G   KA+Q+  R  V     DVV+Y   +R L + G+ +
Sbjct: 170 NSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMSVAP---DVVTYNTILRSLCDSGKLK 226

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLT 574
           EA  +  +       P+  TY +++ + C +  +    +LL ++     + D  T   L 
Sbjct: 227 EAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLI 286

Query: 575 KFIFKFHSSSSAVNQLVEMCNLGLIPD 601
             I K      A+  L  M   G  P+
Sbjct: 287 NGICKEGRLDEAIKFLNNMPLYGCQPN 313


>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 113/481 (23%), Positives = 215/481 (44%), Gaps = 8/481 (1%)

Query: 153 NTFARNIVMDVLFKIGRVDLGIKVLKE-TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
           N  + NI++  L   GR+    +   E +  P+ +++   +   C   ++ N   ++  M
Sbjct: 254 NVCSHNILLKALLSAGRLKDACQHFDEMSSPPDVVTYGTMVHGYCVRGELENAVKLLDEM 313

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
             KG   N  ++  ++   C  G++++A ++L  M   G +L    +T +I GF     L
Sbjct: 314 AAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDL 373

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
             A  L+E+M + G + + VT+T+LI G   A     A   L  +  +G   D+V + VL
Sbjct: 374 AAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVL 433

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV---CGLEV 388
           ID   K G+  +A  V++ ++  ++ P+  T+ +L   +C  G      +L+   C   +
Sbjct: 434 IDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGL 493

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
           E ++  YN+L++  CK G   QA+++   M   G   D Y++  L+  LC + + D A N
Sbjct: 494 ELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHN 553

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           + Q ++      +   +  +++    +GR     +L    + +    +VV+Y   ++   
Sbjct: 554 MLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYC 613

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
                +    +Y  M    V PN  TY +++   CK RN+K      Q++I+  + L   
Sbjct: 614 IDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTAS 673

Query: 569 TSIRLTKFIFKFHSSSSAVNQLVEMCNLGLI--PD--EMWRKLGLLSDETMTPVSLFDGF 624
           +   L + + K    S A     +M N GL   PD    +  +    D   + ++L D  
Sbjct: 674 SYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTITLCDEL 733

Query: 625 V 625
           V
Sbjct: 734 V 734



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 106/440 (24%), Positives = 206/440 (46%), Gaps = 12/440 (2%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP----NFL 186
           RGE+   V +  DEM   G   N      V+ +L   G+V   ++VL++  +     + +
Sbjct: 300 RGELENAV-KLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAV 358

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
            F   +   C   D++  + +   M ++G   +      L+N  C+ G + EA ++L  M
Sbjct: 359 VFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEM 418

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
           +  G  + V  +TVLIDG+ +   +  A  +  +MV    +PNVVTYT+L  G  +    
Sbjct: 419 VDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDV 478

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
             A   L  + ++G   ++  +N LI+ L K G+ + A+ +   +       D YT+ +L
Sbjct: 479 RAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTL 538

Query: 367 LSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           + T+C SG F     ++  +    ++  +  YN L++ FC +G      KL   ML+K  
Sbjct: 539 IDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNV 598

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
            P+  ++  L++  C  + +     +Y+G+     A N + +  ++    +A    +A+ 
Sbjct: 599 RPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALY 658

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKH--IAVPPNAYTYRVMLLS 541
             +  I +   L   SY+  IR L +  +  EA + + +M++  +   P+ Y++  M +S
Sbjct: 659 FHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSF-YMDIS 717

Query: 542 FCKERNIKMVKRLLQDVIDA 561
           F  E N++    L  ++++A
Sbjct: 718 F-NEDNLESTITLCDELVEA 736



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 94/391 (24%), Positives = 171/391 (43%), Gaps = 23/391 (5%)

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           K F  +   F++LL C         + +LL  +   G S S  +   ++        LD 
Sbjct: 194 KAFSSDPASFDLLLLCL-------PSAELLRRLRQYGLSPSPESCNAVLSRLP----LDE 242

Query: 274 AGYLWEKMV-QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
           A  L+ ++  +N CS N+     L+K  + A     A    D + S    PD+V +  ++
Sbjct: 243 AIALFRELPDKNVCSHNI-----LLKALLSAGRLKDACQHFDEMSS---PPDVVTYGTMV 294

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VE 389
                 G  ++A+ + D +    L  ++  + S+++ +C  G+ S   +++  +    V 
Sbjct: 295 HGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVA 354

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            D VV+  ++S FC  G    A +L+  M  +G   D  +   L+ GLC A ++ EA  V
Sbjct: 355 LDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRV 414

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
            Q +V     V+   +T ++D   + G   +A ++    +  +   +VV+YT    GL +
Sbjct: 415 LQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCK 474

Query: 510 GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
            G    A  L  +M +  +  N YTY  ++   CK  N++   R++ ++  A    D +T
Sbjct: 475 QGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYT 534

Query: 570 SIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
              L   + K      A N L EM + G+ P
Sbjct: 535 YTTLIDTLCKSGEFDRAHNMLQEMLDKGIKP 565



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 77/310 (24%), Positives = 135/310 (43%), Gaps = 15/310 (4%)

Query: 63  DLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTF 122
           DL A        ++R    D  +   +I+ + R  G  +    ++ E+   G  +   T+
Sbjct: 372 DLAAARRLFEEMQKRGLAADRVTHTALINGLCR-AGELKEADRVLQEMVDKGLDVDVVTY 430

Query: 123 LLFLRIYWRGEMYGMVLEAF---DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE 179
            + +  Y +    G ++EAF   +EM      PN      + D L K G V    ++L E
Sbjct: 431 TVLIDGYCK---RGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHE 487

Query: 180 T-----QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
                 +L N  ++N  +  LCK  ++     ++  M   G   +V  +  L++  CK G
Sbjct: 488 MCNKGLEL-NVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSG 546

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
               A+ +L  M+  G   S+  + VL++GF    R++    L E M++    PNVVTY 
Sbjct: 547 EFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYN 606

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE- 353
           SL+K +   K           + S+  AP+   +N+LI    K  +  +AL  +  ++E 
Sbjct: 607 SLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEK 666

Query: 354 -LKLVPDSYT 362
            L+L   SY+
Sbjct: 667 GLRLTASSYS 676


>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
 gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
          Length = 727

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 137/572 (23%), Positives = 234/572 (40%), Gaps = 47/572 (8%)

Query: 24  SFKSIHQISSPKVCATTHQDFPIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDV 83
           S +S  + ++P  C+T       ++A H V   + +C   L  L         R  + ++
Sbjct: 175 SAESQARDATPAACSTLCLAAFRVVACHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREM 234

Query: 84  QSFDHMISVVTRLT--------GRFETVRGIVGELARVG--CVIKAQTFLLFLRIYWRGE 133
              +   ++VT  T        GR +    ++ E+   G  C++   T+ + +    R  
Sbjct: 235 LQLEIEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREG 294

Query: 134 MYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFN 189
                 +  D M R     ++F  N ++  L + G V     L +++  E  +P  +++N
Sbjct: 295 HLENAAKLVDSM-RLSKKASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYN 353

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
             +  L K   V   +     M   G  P++  +  +LN +CK G + EA  LLG +   
Sbjct: 354 AIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRA 413

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           G + +V  +  LIDG+ RL  L+ A  L E+MV+ GC P+V TYT L+ G  + +   +A
Sbjct: 414 GLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMA 473

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
             F D + S+G  PD   +N  I     +G    A  + + ++   + PD+         
Sbjct: 474 REFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDT--------- 524

Query: 370 VCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
                                  V YN ++   CK G    A  L   M+  G  PD  +
Sbjct: 525 -----------------------VTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCIT 561

Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
           +  L+   C    + EA  +  G+V +    +   +T ++      G  + A   FR+ +
Sbjct: 562 YTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKML 621

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
                 + ++Y V I  L   GRT  AY  + +M    + PN YTY +++   C+E N  
Sbjct: 622 DVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWA 681

Query: 550 MVKRLLQDVIDARIELDYHTSIRLTKFIFKFH 581
              RL  ++    I  DY T   L K   K H
Sbjct: 682 DAIRLYFEMHQNGIPPDYCTHNALFKGFDKGH 713



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 74/299 (24%), Positives = 122/299 (40%), Gaps = 42/299 (14%)

Query: 83  VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF 142
           V +++ +I    RL G  E  R +  E+   GC     T+ + +    +     M  E F
Sbjct: 419 VLTYNTLIDGYCRLGG-LEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFF 477

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-----PNFLSFNIALCNLCK 197
           DEM   G  P+ FA N  +     +G      + L+E  +     P+ +++N+ +  LCK
Sbjct: 478 DEMLSKGLQPDCFAYNTRICAELILGDTHKAFQ-LREVMMLKGIYPDTVTYNVIIDGLCK 536

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
             ++ + KD+   MV  G  P+   +  L++  C+ G ++EA +LL  M++ G   SV  
Sbjct: 537 TGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVT 596

Query: 258 WTVLIDG-------------FR----------------------RLRRLDMAGYLWEKMV 282
           +T+LI               FR                      R  R  +A + + +M+
Sbjct: 597 YTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEML 656

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
           + G +PN  TYT LI G      ++ A      +   G  PD   HN L     K   Y
Sbjct: 657 ERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGFDKGHMY 715



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/291 (23%), Positives = 125/291 (42%), Gaps = 14/291 (4%)

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
           G APD+   N ++  L     +DD   VY  +L+L++ P   T+ +LL +    GR    
Sbjct: 203 GVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEA 262

Query: 380 PKLVCGLEVEA-----DLVVYNALLSYFCKAGFPNQAVKLYNTM-LDK---GFTPDNYSF 430
             L+  +E +      + V YN ++S+  + G    A KL ++M L K    FT +    
Sbjct: 263 SMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSKKASSFTYNPLIT 322

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             L RG     +  +     +GI+      NA +H  +    +EA +  K  ++    ++
Sbjct: 323 ALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQL-KFAEMRAMGLL 381

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
                D+++Y   + G  + G  +EA  L   ++   + P   TY  ++  +C+   ++ 
Sbjct: 382 P----DLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEE 437

Query: 551 VKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            +RL +++++     D  T   L     K  +   A     EM + GL PD
Sbjct: 438 ARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPD 488


>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 120/527 (22%), Positives = 224/527 (42%), Gaps = 51/527 (9%)

Query: 65  IALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLL 124
           + + FF W  K+R++ HD  ++  +I  +    G    +   + E+ R  CVI       
Sbjct: 106 VKIQFFKWAGKRRNFEHDSTTYMALIHCLDE-AGMLGEMWKTIQEMVRSTCVIGPADLSE 164

Query: 125 FLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE----- 179
            +++  + +M    L  F ++      P +   N ++ +L + G  +   ++  E     
Sbjct: 165 IVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEG 224

Query: 180 TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEA 239
             LP+ ++++  +    KL    +   +   M   G +P  +++  +L  + K+GR+ +A
Sbjct: 225 DCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKA 284

Query: 240 YQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGC------------- 286
             L+  M   G +L+V  +T LI G  +  +++ A  ++  M++ GC             
Sbjct: 285 LGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINL 344

Query: 287 ----------------------SPNVVTYTSLIKGFMEAKM-FSIAFSFLDMLESEGHAP 323
                                 +PNVVTY ++IK   E+K   S AF + + ++  G  P
Sbjct: 345 LGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVP 404

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV 383
               +++LID   K    + AL + + + E    P    +CSL++ +  + R+    +L 
Sbjct: 405 SSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELF 464

Query: 384 ------CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
                 CG    +   VY  ++ +  K G  ++AV L+N M   G  PD Y++  L+ G+
Sbjct: 465 QELRENCGY---SSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGM 521

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
                 DEA ++ + +  N    + + H  I++     G    AI++F R    K   DV
Sbjct: 522 VRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDV 581

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
           VSY   +  L   G  EEA  L  +M       +  TY  +L +  K
Sbjct: 582 VSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSILEAVGK 628



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 92/391 (23%), Positives = 158/391 (40%), Gaps = 81/391 (20%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFD---EMGRFGFTPNT 154
           GR E   G+V E+   GC +   T+   ++   +    G V EA+     M + G  P+ 
Sbjct: 279 GRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKA---GKVEEAYSIFMNMLKEGCKPDV 335

Query: 155 FARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLN-DVSNVKDVIG 209
              N ++++L K GR+   IK+ +E +     PN +++N  +  L +     S       
Sbjct: 336 VLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYE 395

Query: 210 MMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLR 269
            M   G  P+   + IL++ FCK  R+ +A  LL  M   G +    A+  LI+   + +
Sbjct: 396 KMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAK 455

Query: 270 RLDMAGYLWEKMVQN-----------------------------------GCSPNVVTYT 294
           R + A  L++++ +N                                   GC+P+V  Y 
Sbjct: 456 RYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYN 515

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
           +L+ G +   M   A S L  +E  G  PDL  HN++++  ++ G    A++++  +   
Sbjct: 516 ALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNS 575

Query: 355 KLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKL 414
           K+ PD                                +V YN +L    +AG   +A KL
Sbjct: 576 KIKPD--------------------------------VVSYNTVLGCLSRAGMFEEAAKL 603

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
              M  KGF  D  ++  +L  +    KIDE
Sbjct: 604 MKEMNSKGFEYDLITYSSILEAVG---KIDE 631



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 46/214 (21%), Positives = 90/214 (42%), Gaps = 1/214 (0%)

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
           E D   Y AL+    +AG   +  K    M+             +++ L  A+ +++A++
Sbjct: 121 EHDSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALS 180

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL-DVVSYTVAIRGL 507
           ++  I        ++ + +++  L++ G   K  +L+     E   L D V+Y+  I   
Sbjct: 181 IFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAF 240

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
            + GR + A  L+ +MK   + P A  Y  +L  + K   ++    L+Q++ +    L  
Sbjct: 241 GKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTV 300

Query: 568 HTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           +T   L K + K      A +  + M   G  PD
Sbjct: 301 YTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPD 334


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 115/509 (22%), Positives = 218/509 (42%), Gaps = 12/509 (2%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCK 197
           + EM   G  P+    + ++  L K   +D  ++VL    K   +P+ +++N  L   C 
Sbjct: 224 YHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCS 283

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
                     +  M   G  PNV  +  L+N  CK GR  EA ++   M   G    +  
Sbjct: 284 SGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIAT 343

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  L+ G+     L     L + MV+NG  P+   +  LI  + + +    A      + 
Sbjct: 344 YRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMR 403

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G  P++V +  +ID L K GS DDA+  ++ +++  L P+   + SL+  +C   ++ 
Sbjct: 404 QHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWD 463

Query: 378 LLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
              +L+  +    +  + + +N+++   CK G   ++ KL++ M+  G  PD  ++  L+
Sbjct: 464 KAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLI 523

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            G C A K+DEA  +   +V      +   +  +++      R   A+ LF+  +     
Sbjct: 524 DGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVS 583

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
            ++++Y + ++GL    RT  A  LY  +          TY ++L   CK        R+
Sbjct: 584 PNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRM 643

Query: 555 LQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDET 614
            Q++    ++L+  T   +   + K      A +        GL+PD   R   L+++  
Sbjct: 644 FQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPD--VRTYSLMAENL 701

Query: 615 MTPVSLF---DGFVPCERRAGNANHLLLN 640
           +   SL    D F+  E    +A+  +LN
Sbjct: 702 IEQGSLEELDDLFLSMEENGCSADSRMLN 730



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/443 (21%), Positives = 204/443 (46%), Gaps = 7/443 (1%)

Query: 109 ELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIG 168
           E+   G +    T+   +    + +     +E  + M + G  P+    N ++      G
Sbjct: 226 EMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSG 285

Query: 169 RVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFE 224
           +    I  LK+ +     PN ++++  +  LCK    +  + +   M ++G  P++  + 
Sbjct: 286 QPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYR 345

Query: 225 ILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN 284
            LL  +   G + E + LL LM+  G     + + +LI  + +  ++D A  ++ KM Q+
Sbjct: 346 TLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQH 405

Query: 285 GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
           G +PNVV Y ++I    ++     A  + + +  EG  P+++ +  LI  L     +D A
Sbjct: 406 GLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKA 465

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF---SLLPKLVCGLEVEADLVVYNALLSY 401
            ++   +L+  +  ++  F S++ + C  GR      L  L+  + V+ D++ YN L+  
Sbjct: 466 EELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDG 525

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVN 461
            C AG  ++A KL  +M+  G  PD  ++  L+ G C   ++D+A+ +++ +V +  + N
Sbjct: 526 CCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPN 585

Query: 462 AHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYS 521
              +  I+  L    R   A +L+         L++ +Y + + GL +   T+EA  ++ 
Sbjct: 586 IITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQ 645

Query: 522 QMKHIAVPPNAYTYRVMLLSFCK 544
            +    +     T+ +M+ +  K
Sbjct: 646 NLCLTDLQLETRTFNIMIGALLK 668



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 102/457 (22%), Positives = 197/457 (43%), Gaps = 41/457 (8%)

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK---GFYPNVRMFEILLNCFCKMGRIAE 238
           +P+  S+N  L  LC  N      +++ MM      G  P+V  +  +LN F K G   +
Sbjct: 160 IPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDK 219

Query: 239 AYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIK 298
           AY     M+  G    V  ++ +I    + + +D A  +   MV+NG  P+ +TY S++ 
Sbjct: 220 AYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 279

Query: 299 GFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP 358
           G+  +     A   L  + S+G  P++V ++ L++ L K G   +A  ++D + +  L P
Sbjct: 280 GYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEP 339

Query: 359 DSYTFCSLLSTVCLSG-------------RFSLLPK------LVCGLE------------ 387
           D  T+ +LL      G             R  + P       L+C               
Sbjct: 340 DIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVF 399

Query: 388 -------VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
                  +  ++V Y  ++   CK+G  + A+  +  M+D+G TP+   +  L+ GLC  
Sbjct: 400 SKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTC 459

Query: 441 RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSY 500
            K D+A  +   ++     +N     +I+D   + GR  ++ +LF   +      D+++Y
Sbjct: 460 DKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITY 519

Query: 501 TVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
              I G    G+ +EA  L + M  + V P+  TY  ++  +C+   +     L ++++ 
Sbjct: 520 NTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVS 579

Query: 561 ARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLG 597
           + +  +  T   + + +F    +++A    V +   G
Sbjct: 580 SGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSG 616



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 113/474 (23%), Positives = 204/474 (43%), Gaps = 14/474 (2%)

Query: 142 FDEMGRFG---FTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF----LSFNIALCN 194
           ++ M R G    TP      I++    + GR+DLG   L       F    ++F   L  
Sbjct: 77  YNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKG 136

Query: 195 LCKLNDVSNVKD-VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT---LG 250
           LC     S+  D V+  M   G  P+V  +  LL   C   R  EA +LL +M      G
Sbjct: 137 LCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGG 196

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
           +   V ++  +++GF +    D A   + +M+  G  P+VVTY+S+I    +A+    A 
Sbjct: 197 SPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAM 256

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
             L+ +   G  PD + +N ++      G   +A+     +    + P+  T+ SL++ +
Sbjct: 257 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYL 316

Query: 371 CLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           C +GR +   K+   +    +E D+  Y  LL  +   G   +   L + M+  G  PD+
Sbjct: 317 CKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDH 376

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
           + F  L+       K+D+A+ V+  +  +    N   +  ++D L ++G    A+  F +
Sbjct: 377 HVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQ 436

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN 547
            I E    +++ YT  I GL    + ++A  L  +M    +  N   +  ++ S CKE  
Sbjct: 437 MIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 496

Query: 548 IKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           +   ++L   ++   ++ D  T   L            A   L  M ++G+ PD
Sbjct: 497 VIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPD 550



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 83/379 (21%), Positives = 170/379 (44%), Gaps = 7/379 (1%)

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
           + R G       F + +  Y + E     +  F +M + G  PN      V+DVL K G 
Sbjct: 367 MVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGS 426

Query: 170 VDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEI 225
           VD  +    +++ E   PN + +   +  LC  +     +++I  M+ +G   N   F  
Sbjct: 427 VDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNS 486

Query: 226 LLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
           +++  CK GR+ E+ +L  LM+ +G    +  +  LIDG     ++D A  L   MV  G
Sbjct: 487 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVG 546

Query: 286 CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL 345
             P++VTY +LI G+        A +    + S G +P+++ +N+++  L        A 
Sbjct: 547 VKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 606

Query: 346 DVYDGLLELKLVPDSYTFCSLLSTVC---LSGRFSLLPKLVCGLEVEADLVVYNALLSYF 402
           ++Y  + +     +  T+  +L  +C   L+     + + +C  +++ +   +N ++   
Sbjct: 607 ELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGAL 666

Query: 403 CKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNA 462
            K G  ++A  L+      G  PD  ++  +   L     ++E  +++  +  N  + ++
Sbjct: 667 LKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADS 726

Query: 463 HVHTAIVDRLIEAGRCHKA 481
            +  +IV +L++ G   +A
Sbjct: 727 RMLNSIVRKLLQRGDITRA 745



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/228 (21%), Positives = 90/228 (39%), Gaps = 4/228 (1%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           L G+ +    ++  +  VG      T+   +  Y R       L  F EM   G +PN  
Sbjct: 528 LAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNII 587

Query: 156 ARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
             NI++  LF   R     +L + + K        ++NI L  LCK N       +   +
Sbjct: 588 TYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 647

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
                    R F I++    K GR+ EA  L       G    V  ++++ +       L
Sbjct: 648 CLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSL 707

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
           +    L+  M +NGCS +     S+++  ++    + A ++L M++ +
Sbjct: 708 EELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEK 755


>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
          Length = 1351

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 113/473 (23%), Positives = 211/473 (44%), Gaps = 8/473 (1%)

Query: 138 VLEAFDEMGRFGFTPNTFAR-NIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIAL 192
            LE F    R     +T A  N ++D++   GRV    +V    Q      N  +F    
Sbjct: 152 ALERFRSAARRPRVVHTTASCNYMLDLMRDHGRVGDMAEVFDVMQRQIVKANVGTFAAIF 211

Query: 193 CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
             L     + +    + +M   G   N   +  L+    K G   EA ++  +M+  G  
Sbjct: 212 GGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVV 271

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
            SV  ++VL+  F + R ++   +L  +M  +G  PNV +YT  I+   +A+ F  A+  
Sbjct: 272 PSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRI 331

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
           L  +E+EG  PD++ H VLI  L   G   DA DV+  + +    PD  T+ +LL     
Sbjct: 332 LAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFAD 391

Query: 373 SGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
           +G    + ++   ++ +    ++V Y A++   C+ G   +A+++++ M  KG  P+ YS
Sbjct: 392 NGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYS 451

Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
           +  L+ G   A +  +A+ +++ + ++ P  N + H   ++   ++G   KAIQ +    
Sbjct: 452 YNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMK 511

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
            +    DVV+    + GL + GR   A  ++ ++K + V P+  TY +M+    K     
Sbjct: 512 SKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFD 571

Query: 550 MVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
              ++  D+I+     D      L   ++K      A     ++  + L P +
Sbjct: 572 EAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTD 624



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 132/568 (23%), Positives = 259/568 (45%), Gaps = 25/568 (4%)

Query: 49  APHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVG 108
           A  ++H+ L +      AL  F   A++    H   S ++M+ ++ R  GR       VG
Sbjct: 136 AEDVIHA-LRSADGPAEALERFRSAARRPRVVHTTASCNYMLDLM-RDHGR-------VG 186

Query: 109 ELARVGCVIKAQ-------TFL-LFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIV 160
           ++A V  V++ Q       TF  +F  +   G +    + A   M   G   N +  N +
Sbjct: 187 DMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPV-ALPVMKEAGIVLNAYTYNGL 245

Query: 161 MDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
           +  L K G     ++V K    +  +P+  ++++ +    K  DV  V  ++  M   G 
Sbjct: 246 VYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGV 305

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
            PNV  + I +    +  R  EAY++L  M   G    V   TVLI       R+  A  
Sbjct: 306 KPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKD 365

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           ++ KM ++   P+ VTY +L+  F +           + ++++G+  ++V +  +ID L 
Sbjct: 366 VFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALC 425

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV---EADLV 393
           ++G   +AL+++D + +  +VP+ Y++ SL+S    + RF    +L   +++   + +  
Sbjct: 426 QVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGY 485

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            +   ++Y+ K+G   +A++ Y  M  KG  PD  +   +L GL  + ++  A  V+  +
Sbjct: 486 THVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHEL 545

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
                + +   +T ++    +A +  +A+++F   I      DV+     I  L + GR 
Sbjct: 546 KAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRG 605

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
           +EA+ ++ Q+K + + P   TY  +L    +E  +K V  LL+++  +    +  T   +
Sbjct: 606 DEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTI 665

Query: 574 TKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
              + K  + + A++ L  M   G IPD
Sbjct: 666 LDCLCKNGAVNDALDMLYSMTTKGCIPD 693



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 134/619 (21%), Positives = 249/619 (40%), Gaps = 116/619 (18%)

Query: 97   TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
            +GR    + +  EL  +G      T+ + ++   +   +   ++ F +M      P+   
Sbjct: 532  SGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLV 591

Query: 157  RNIVMDVLFKIGRVDLGIKV---LKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
             N ++D L+K GR D   ++   LKE  L P   ++N  L  L +   V  V  ++  M 
Sbjct: 592  VNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMY 651

Query: 213  RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
               + PN+  +  +L+C CK G + +A  +L  M T G    ++++  +I G  +  R +
Sbjct: 652  HSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYN 711

Query: 273  MA----------------------------GYLWEKM-------VQNGCSPNVVTYTSLI 297
             A                            G + E +       +Q G   +  +  SL+
Sbjct: 712  EAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLM 771

Query: 298  KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM------------------- 338
            +G ++      +  F +++ S G   D  F   LI  L K                    
Sbjct: 772  EGILKKAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVS 831

Query: 339  ---GSY---------DDALDVYDGLL----ELKLVPDSYTFCSLLSTVCLSGRFSLLPKL 382
               GSY         ++ +D+ +GL     EL   PD +T+  LL  +  S R   + K+
Sbjct: 832  LKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKV 891

Query: 383  VCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
               +     E+  V YN ++S   K+    QA+ LY  ++ +GF+P   ++  LL GL  
Sbjct: 892  QEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLK 951

Query: 440  ARKIDEAINVYQ--------------GIVMN-----------------------NPAVNA 462
            A +I++A N++                I++N                       NP + +
Sbjct: 952  AGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKS 1011

Query: 463  HVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQ 522
              +T I+D L +AG+ +  +  FR+ +      D+++Y + I GL +  R EEA  L+++
Sbjct: 1012 --YTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNE 1069

Query: 523  MKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHS 582
            M+   + PN YTY  ++L   K        ++ ++++    + +  T   L +      S
Sbjct: 1070 MQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGS 1129

Query: 583  SSSAVNQLVEMCNLGLIPD 601
            + SA      M   G +P+
Sbjct: 1130 TDSAYAAYGRMIVGGCLPN 1148



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 80/331 (24%), Positives = 152/331 (45%), Gaps = 39/331 (11%)

Query: 142  FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
            F EM   G  P+ F  N+++D + K  R++  +KV +E         ++++N  +  L K
Sbjct: 857  FAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVK 916

Query: 198  LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
               +    D+   ++ +GF P    +  LL+   K GRI +A  L   M+  G   +   
Sbjct: 917  SRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTI 976

Query: 258  WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
            + +L++G R     +   +L++ MV  G +P++ +YT +I    +A   +   ++   L 
Sbjct: 977  YNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLL 1036

Query: 318  SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
              G  PDL+ +N+LID L K    ++A+ +++ + +  +VP+ YT               
Sbjct: 1037 EMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYT--------------- 1081

Query: 378  LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
                             YN+L+ +  KAG   +A K+Y  +L KG+ P+ +++  L+RG 
Sbjct: 1082 -----------------YNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGY 1124

Query: 438  CGARKIDEAINVYQGIVMNNPAVNA---HVH 465
              +   D A   Y  +++     N+   H+H
Sbjct: 1125 SVSGSTDSAYAAYGRMIVGGCLPNSSTCHIH 1155



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 109/541 (20%), Positives = 229/541 (42%), Gaps = 15/541 (2%)

Query: 71  IWCAKQRDYFHD-VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIY 129
           IW A + D ++D V ++  +I  + ++   FE +  +  E+ + G V +  ++   +  +
Sbjct: 401 IWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALE-MFDEMKQKGIVPEQYSYNSLISGF 459

Query: 130 WRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL------- 182
            + + +G  LE F  M   G  PN +   + ++   K G     IK ++  +L       
Sbjct: 460 LKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGE---SIKAIQRYELMKSKGIV 516

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+ ++ N  L  L K   +   K V   +   G  P+   + +++ C  K  +  EA ++
Sbjct: 517 PDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKI 576

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
              MI       V     LID   +  R D A  ++ ++ +    P   TY +L+ G   
Sbjct: 577 FYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGR 636

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
                     L+ +    + P+L+ +N ++DCL K G+ +DALD+   +     +PD  +
Sbjct: 637 EGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSS 696

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGLE--VEADLVVYNALLSYFCKAGFPNQAVKLYNT-ML 419
           + +++  +    R++    + C ++  +  D      +L  F K G   +A+ +     L
Sbjct: 697 YNTVIYGLVKEERYNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKEYFL 756

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
             G   D  S   L+ G+      +++I   + I  +   ++      ++  L +  +  
Sbjct: 757 QPGSKTDRSSCHSLMEGILKKAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKAL 816

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
           +A +L ++       L   SY   I GL++    + A  L+++MK +   P+ +TY ++L
Sbjct: 817 EAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLL 876

Query: 540 LSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLI 599
            +  K   I+ + ++ +++     E  Y T   +   + K      A++    + + G  
Sbjct: 877 DAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFS 936

Query: 600 P 600
           P
Sbjct: 937 P 937



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/351 (22%), Positives = 155/351 (44%), Gaps = 46/351 (13%)

Query: 226  LLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
            L+   CK  +  EA++L+    + G SL   ++  LI G      +D+A  L+ +M + G
Sbjct: 805  LIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELG 864

Query: 286  CSPN-----------------------------------VVTYTSLIKGFMEAKMFSIAF 310
            C P+                                    VTY ++I G ++++    A 
Sbjct: 865  CGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAI 924

Query: 311  SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
                 L S+G +P    +  L+D L K G  +DA ++++ +LE     +    C++ + +
Sbjct: 925  DLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKAN----CTIYNIL 980

Query: 371  CLSGRFSLLPKLVCGL-------EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
                R +   + VC L        +  D+  Y  ++   CKAG  N  +  +  +L+ G 
Sbjct: 981  LNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGL 1040

Query: 424  TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
             PD  ++  L+ GL  +++++EA++++  +       N + + +++  L +AG+  +A +
Sbjct: 1041 EPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGK 1100

Query: 484  LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
            ++   + + +  +V +Y   IRG    G T+ AY  Y +M      PN+ T
Sbjct: 1101 MYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSST 1151


>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1080

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 103/412 (25%), Positives = 188/412 (45%), Gaps = 20/412 (4%)

Query: 210 MMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLR 269
           +M   G   N   +  L+    K G   EA ++  +M+  G   SV  ++VL+  F + R
Sbjct: 150 VMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRR 209

Query: 270 RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHN 329
            ++   +L  +M  +G  PNV +YT  I+   +AK F  A+  L  +E+EG  PD++ H 
Sbjct: 210 DVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHT 269

Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE 389
           VLI  L   G   DA DV+  + +    PD  T+ +LL     +G    + ++   ++ +
Sbjct: 270 VLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKAD 329

Query: 390 A---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
               ++V Y A++   C+ G   +A+++++ M  KG  P+ YS+  L+ G   A +  +A
Sbjct: 330 GYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDA 389

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
           + +++ + ++ P  N + H   ++   ++G   KAIQ +     +    DVV+    + G
Sbjct: 390 LELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFG 449

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           L + GR   A  ++ ++K + V P+  TY +M+    K        ++  D+I+     D
Sbjct: 450 LAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPD 509

Query: 567 YHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTPV 618
                              AVN L++        DE WR    L +  + P 
Sbjct: 510 V-----------------LAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPT 544



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 131/568 (23%), Positives = 260/568 (45%), Gaps = 25/568 (4%)

Query: 49  APHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVG 108
           A  ++H+ L +      AL  F   A++    H   S ++M+ ++ R  GR       VG
Sbjct: 57  AEDVIHA-LRSADGPAEALERFRSAARKPRVAHTTASCNYMLELM-RGHGR-------VG 107

Query: 109 ELARVGCVIKAQ-------TFL-LFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIV 160
           ++A V  V++ Q       TF  +F  +   G +    + A   M   G   N +  N +
Sbjct: 108 DMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPV-ALPVMKEAGIVLNAYTYNGL 166

Query: 161 MDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
           +  L K G     ++V +    +  +P+  ++++ +    K  DV  V  ++  M   G 
Sbjct: 167 VYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGV 226

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
            PNV  + I +    +  R  EAY++L  M   G    V   TVLI       R+  A  
Sbjct: 227 KPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKD 286

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           ++ KM ++   P+ VTY +L+  F +           + ++++G+  ++V +  +ID L 
Sbjct: 287 VFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALC 346

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV---EADLV 393
           ++G   +AL+++D + +  +VP+ Y++ SL+S    + RF    +L   +++   + +  
Sbjct: 347 QVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGY 406

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            +   ++Y+ K+G   +A++ Y  M  KG  PD  +   +L GL  + ++  A  V+  +
Sbjct: 407 THVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHEL 466

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
                + +   +T ++    +A +  +A+++F   I      DV++    I  L + GR 
Sbjct: 467 KAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRG 526

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
           +EA+ ++ Q+K + + P   TY  +L    +E  +K V  LL+++  +    +  T   +
Sbjct: 527 DEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTI 586

Query: 574 TKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
              + K  + + A++ L  M   G IPD
Sbjct: 587 LDCLCKNGAVNDALDMLYSMTTKGCIPD 614



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 134/619 (21%), Positives = 249/619 (40%), Gaps = 116/619 (18%)

Query: 97   TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
            +GR    + +  EL  +G      T+ + ++   +   +   ++ F +M      P+  A
Sbjct: 453  SGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLA 512

Query: 157  RNIVMDVLFKIGRVDLGIKV---LKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
             N ++D L+K GR D   ++   LKE  L P   ++N  L  L +   V  V  ++  M 
Sbjct: 513  VNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMY 572

Query: 213  RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
               + PN+  +  +L+C CK G + +A  +L  M T G    ++++  +I G  +  R +
Sbjct: 573  HSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYN 632

Query: 273  MA----------------------------GYLWEKM-------VQNGCSPNVVTYTSLI 297
             A                            G + E +       +Q G   +  +  SL+
Sbjct: 633  EAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLM 692

Query: 298  KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM------------------- 338
            +G ++      +  F +++ S G   D  F   LI  L K                    
Sbjct: 693  EGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVS 752

Query: 339  ---GSY---------DDALDVYDGLL----ELKLVPDSYTFCSLLSTVCLSGRFSLLPKL 382
               G Y         ++ +D+ +GL     EL   PD +T+  LL  +  S R   + K+
Sbjct: 753  LKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKV 812

Query: 383  VCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
               +     E+  V YN ++S   K+    QA+ LY  ++ +GF+P   ++  LL GL  
Sbjct: 813  QEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLK 872

Query: 440  ARKIDEAINVYQ--------------GIVMN-----------------------NPAVNA 462
            A +I++A N++                I++N                       NP + +
Sbjct: 873  AGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKS 932

Query: 463  HVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQ 522
              +T I+D L +AG+ +  +  FR+ +      D+++Y + I GL +  R EEA  L+++
Sbjct: 933  --YTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNE 990

Query: 523  MKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHS 582
            M+   + PN YTY  ++L   K        ++ ++++    + +  T   L +      S
Sbjct: 991  MQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGS 1050

Query: 583  SSSAVNQLVEMCNLGLIPD 601
            + SA      M   G +P+
Sbjct: 1051 TDSAYAAYGRMIVGGCLPN 1069



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 79/335 (23%), Positives = 154/335 (45%), Gaps = 36/335 (10%)

Query: 142  FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
            F EM   G  P+ F  N+++D + K  R++  +KV +E         ++++N  +  L K
Sbjct: 778  FAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVK 837

Query: 198  LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
               +    D+   ++ +GF P    +  LL+   K GRI +A  L   M+  G   +   
Sbjct: 838  SRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTI 897

Query: 258  WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
            + +L++G R     +   +L++ MV  G +P++ +YT +I    +A   +   ++   L 
Sbjct: 898  YNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLL 957

Query: 318  SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
              G  PDL+ +N+LID L K    ++A+ +++ + +  +VP+ YT               
Sbjct: 958  EMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYT--------------- 1002

Query: 378  LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
                             YN+L+ +  KAG   +A K+Y  +L KG+ P+ +++  L+RG 
Sbjct: 1003 -----------------YNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGY 1045

Query: 438  CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
              +   D A   Y  +++     N+  +  + ++L
Sbjct: 1046 SVSGSTDSAYAAYGRMIVGGCLPNSSTYMQLPNQL 1080



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 110/541 (20%), Positives = 231/541 (42%), Gaps = 15/541 (2%)

Query: 71  IWCAKQRDYFHD-VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIY 129
           IW A + D ++D V ++  +I  + ++   FE +  +  E+ + G V +  ++   +  +
Sbjct: 322 IWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALE-MFDEMKQKGIVPEQYSYNSLISGF 380

Query: 130 WRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL------- 182
            + + +G  LE F  M   G  PN +   + ++   K G     IK ++  +L       
Sbjct: 381 LKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGE---SIKAIQRYELMKSKGIV 437

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+ ++ N  L  L K   +   K V   +   G  P+   + +++ C  K  +  EA ++
Sbjct: 438 PDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKI 497

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
              MI       V A   LID   +  R D A  ++ ++ +    P   TY +L+ G   
Sbjct: 498 FYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGR 557

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
                     L+ +    + P+L+ +N ++DCL K G+ +DALD+   +     +PD  +
Sbjct: 558 EGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSS 617

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGLE--VEADLVVYNALLSYFCKAGFPNQAVK-LYNTML 419
           + +++  +    R++    + C ++  +  D      +L  F K G   +A+  + +  L
Sbjct: 618 YNTVIYGLVKEERYNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFL 677

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
             G   D  S   L+ G+     I+++I   + I  +   ++      ++  L +  +  
Sbjct: 678 QPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKAL 737

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
           +A +L ++       L    Y   I GL++    + A  L+++MK +   P+ +TY ++L
Sbjct: 738 EAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLL 797

Query: 540 LSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLI 599
            +  K   I+ + ++ +++     E  Y T   +   + K      A++    + + G  
Sbjct: 798 DAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFS 857

Query: 600 P 600
           P
Sbjct: 858 P 858



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/352 (22%), Positives = 155/352 (44%), Gaps = 46/352 (13%)

Query: 226  LLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
            L+   CK  +  EA++L+    + G SL    +  LI G      +D+A  L+ +M + G
Sbjct: 726  LIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELG 785

Query: 286  CSPN-----------------------------------VVTYTSLIKGFMEAKMFSIAF 310
            C P+                                    VTY ++I G ++++    A 
Sbjct: 786  CGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAI 845

Query: 311  SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
                 L S+G +P    +  L+D L K G  +DA ++++ +LE     +    C++ + +
Sbjct: 846  DLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKAN----CTIYNIL 901

Query: 371  CLSGRFSLLPKLVCGL-------EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
                R +   + VC L        +  D+  Y  ++   CKAG  N  +  +  +L+ G 
Sbjct: 902  LNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGL 961

Query: 424  TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
             PD  ++  L+ GL  +++++EA++++  +       N + + +++  L +AG+  +A +
Sbjct: 962  EPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGK 1021

Query: 484  LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
            ++   + + +  +V +Y   IRG    G T+ AY  Y +M      PN+ TY
Sbjct: 1022 MYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTY 1073


>gi|356533985|ref|XP_003535538.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like, partial [Glycine max]
          Length = 594

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 112/474 (23%), Positives = 196/474 (41%), Gaps = 52/474 (10%)

Query: 136 GMVLEAF---DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-----PNFLS 187
           G + EA    DEM      P+    N ++D  FK      G ++L+E +      PN ++
Sbjct: 151 GKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLLEEMKSRGGVEPNAVT 210

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
            NI +    K   ++   D +  MV  G  P+   +  ++N FCK G++ EA++++  M 
Sbjct: 211 HNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFCKAGKLGEAFRMMDEMA 270

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
             G    +     ++      ++ + A  L  K  + G   + VTY +LI G+ + K   
Sbjct: 271 RKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVTYGTLIMGYFKGKQED 330

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A    + ++  G  P +V +N LI  L   G  D A+D  + LLE  LVPD        
Sbjct: 331 KALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELLEKGLVPD-------- 382

Query: 368 STVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
                              EV  +++++      +C  G  ++A + +N M+   F PD 
Sbjct: 383 -------------------EVSCNIIIHG-----YCWEGMVDKAFQFHNKMVGNSFKPDI 418

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
           ++   LLRGLC    +++A  ++   +    +V+   +  ++  L + GR  +A  L   
Sbjct: 419 FTRNILLRGLCRVDMLEKAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTD 478

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT------------Y 535
             V+K+  D  +Y   +R L   GRTEEA    S++         +             Y
Sbjct: 479 MEVKKFEPDQYTYNAIVRALTHAGRTEEAEKFMSKLSETGQAVKTHDTSQELDASSDIMY 538

Query: 536 RVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQ 589
              +   C +   K   +L Q+     + L+ +T I+L     K   S S V+ 
Sbjct: 539 SQQISDLCTQGKYKEAMKLFQESEQKGVSLNKYTYIKLMDGFLKRRKSISKVDH 592



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 115/470 (24%), Positives = 206/470 (43%), Gaps = 65/470 (13%)

Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
           +V  +  L+   C  G+I EA ++   M +L     V  +  LIDG  + R       L 
Sbjct: 136 DVWTYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLL 195

Query: 279 EKM-VQNGCSPNVVTYTSLIKGF-MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           E+M  + G  PN VT+  ++K F  E K+   + + + M+ES G +PD   +N +I+   
Sbjct: 196 EEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVES-GVSPDCFTYNTMINGFC 254

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA------ 390
           K G   +A  + D +    L PD  T  ++L T+C+  +    P+    L V+A      
Sbjct: 255 KAGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKK----PEEAYELTVKARKRGYI 310

Query: 391 -DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN- 448
            D V Y  L+  + K    ++A+KL+  M  +G  P   S+  L+RGLC + K D+A++ 
Sbjct: 311 LDEVTYGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDK 370

Query: 449 ----VYQGIVMNNPAVNAHVH----TAIVDRLIE---------------------AGRC- 478
               + +G+V +  + N  +H      +VD+  +                      G C 
Sbjct: 371 LNELLEKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCR 430

Query: 479 ----HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
                KA +LF   I ++  +DVV+Y   I  L + GR +EA+ L + M+     P+ YT
Sbjct: 431 VDMLEKAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYT 490

Query: 535 YRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAV--NQLVE 592
           Y  ++ +       +  ++ +  + +    +  H + +      +  +SS  +   Q+ +
Sbjct: 491 YNAIVRALTHAGRTEEAEKFMSKLSETGQAVKTHDTSQ------ELDASSDIMYSQQISD 544

Query: 593 MCNLGLIPDEMWRKLGLLSDE------TMTPVSLFDGFVPCERRAGNANH 636
           +C  G   + M  KL   S++        T + L DGF+   +     +H
Sbjct: 545 LCTQGKYKEAM--KLFQESEQKGVSLNKYTYIKLMDGFLKRRKSISKVDH 592



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 94/403 (23%), Positives = 158/403 (39%), Gaps = 92/403 (22%)

Query: 130 WRGEMYGMVLEAFDEM-GRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPN 184
           WRG   G  L   +EM  R G  PN    NI++    K G++    D  +K+++    P+
Sbjct: 185 WRGSTEGFRL--LEEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPD 242

Query: 185 FLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL- 243
             ++N  +   CK   +     ++  M RKG  P++     +L+  C   +  EAY+L  
Sbjct: 243 CFTYNTMINGFCKAGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTV 302

Query: 244 -----GLM---ITLGTSL--------------------------SVNAWTVLIDGFRRLR 269
                G +   +T GT +                          SV ++  LI G     
Sbjct: 303 KARKRGYILDEVTYGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSG 362

Query: 270 RLDMA------------------------GYLWE-----------KMVQNGCSPNVVTYT 294
           + D A                        GY WE           KMV N   P++ T  
Sbjct: 363 KTDQAVDKLNELLEKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRN 422

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
            L++G     M   AF   +   S+ ++ D+V +N +I  L K G  D+A D+   +   
Sbjct: 423 ILLRGLCRVDMLEKAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVK 482

Query: 355 KLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL--------------EVEADL-VVYNALL 399
           K  PD YT+ +++  +  +GR     K +  L              E++A   ++Y+  +
Sbjct: 483 KFEPDQYTYNAIVRALTHAGRTEEAEKFMSKLSETGQAVKTHDTSQELDASSDIMYSQQI 542

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
           S  C  G   +A+KL+     KG + + Y+++ L+ G    RK
Sbjct: 543 SDLCTQGKYKEAMKLFQESEQKGVSLNKYTYIKLMDGFLKRRK 585



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/247 (20%), Positives = 104/247 (42%), Gaps = 19/247 (7%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIY-WRGE 133
           K+R     V S++ +I  +  L+G+ +     + EL   G V    +  + +  Y W G 
Sbjct: 340 KKRGIVPSVVSYNPLIRGLC-LSGKTDQAVDKLNELLEKGLVPDEVSCNIIIHGYCWEG- 397

Query: 134 MYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV----LKETQLPNFLSFN 189
           M     +  ++M    F P+ F RNI++  L ++  ++   K+    + +    + +++N
Sbjct: 398 MVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCRVDMLEKAFKLFNSWISKQNSVDVVTYN 457

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
             +  LCK   +    D++  M  K F P+   +  ++      GR  EA + +  +   
Sbjct: 458 TMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAIVRALTHAGRTEEAEKFMSKLSET 517

Query: 250 GTSLSVNAWTVLIDGFRRLR------------RLDMAGYLWEKMVQNGCSPNVVTYTSLI 297
           G ++  +  +  +D    +             +   A  L+++  Q G S N  TY  L+
Sbjct: 518 GQAVKTHDTSQELDASSDIMYSQQISDLCTQGKYKEAMKLFQESEQKGVSLNKYTYIKLM 577

Query: 298 KGFMEAK 304
            GF++ +
Sbjct: 578 DGFLKRR 584



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 72/149 (48%), Gaps = 4/149 (2%)

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV---EKYPLDVVSYTVAIRGLLEGGRT 513
           NPA++  +    +   + A + H A QLF+  ++       +DV +Y   ++GL + G+ 
Sbjct: 94  NPALSKPLLDTSLAAYVHANQPHLAFQLFQNELIXXXXXXSIDVWTYNTLVKGLCDEGKI 153

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID-ARIELDYHTSIR 572
           +EA  +  +M+ + + P+  TY  ++    K R      RLL+++     +E +  T   
Sbjct: 154 DEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLLEEMKSRGGVEPNAVTHNI 213

Query: 573 LTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           + K+  K    + A + +V+M   G+ PD
Sbjct: 214 MVKWFGKEGKINEASDAVVKMVESGVSPD 242


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 117/480 (24%), Positives = 200/480 (41%), Gaps = 43/480 (8%)

Query: 109 ELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIG 168
           E+ R G      T+ L +    +            +M   G  P+T   N ++     +G
Sbjct: 290 EMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLG 349

Query: 169 RVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV---- 220
           R+    K+ ++ +    +PN +  N  L +LCK        ++   M  KG  P++    
Sbjct: 350 RLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYC 409

Query: 221 -------------------------------RMFEILLNCFCKMGRIAEAYQLLGLMITL 249
                                          R+F IL++ + K G + +A  +   M   
Sbjct: 410 TLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQ 469

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF-MEAKMFSI 308
           G S  V  ++ +I  F R+ RL  A   + +MV  G  PN   Y S+I+GF M   +   
Sbjct: 470 GVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKA 529

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
                +M+      PD+VF N +I+ L K G   DA D++D + ++   PD  TF SL+ 
Sbjct: 530 KELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLID 589

Query: 369 TVCLSGRFSLLPKLVCGLEV---EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
             CL G+     K++  +EV   E D+V Y+ LL  + K G  N  + L+  M  KG  P
Sbjct: 590 GYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKP 649

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           +  ++  +L GL  A +   A   +  ++ +   V   ++  I+  L       +AI LF
Sbjct: 650 NTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILF 709

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
           ++         +      I  + +  R EEA  L++ +    + PN  TY VM+++  K+
Sbjct: 710 QKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKD 769



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 105/483 (21%), Positives = 205/483 (42%), Gaps = 11/483 (2%)

Query: 129 YWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PN 184
           +  GE  G     F EM R G  P+    N+++D L K   +D    VL++       P+
Sbjct: 276 FKEGET-GKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPD 334

Query: 185 FLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLG 244
            +++N  +     L  +     +   M  +G  PN+ +    L   CK GR  EA ++  
Sbjct: 335 TVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFD 394

Query: 245 LMITLGTSLSVNAWTVLIDGFRRLRRL-DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
            M   G    + ++  L+ G+       DM G L+  M  NG + +   +  LI  + + 
Sbjct: 395 SMTAKGHKPDIVSYCTLLHGYASEGWFADMIG-LFNSMKSNGIAADCRVFNILIHAYAKR 453

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
            M   A      ++ +G +PD+V ++ +I   S+MG   DA++ ++ ++   + P++  +
Sbjct: 454 GMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVY 513

Query: 364 CSLLSTVCLSGRFSLLPKLVCGLEVEA----DLVVYNALLSYFCKAGFPNQAVKLYNTML 419
            S++   C+ G      +LV  +  +     D+V +N++++  CK G    A  +++ + 
Sbjct: 514 HSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVT 573

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
           D G  PD  +F  L+ G C   K+D+A  +   + +     +   ++ ++D   + GR +
Sbjct: 574 DIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRIN 633

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
             + LFR    +    + V+Y + + GL   GRT  A   + +M           Y ++L
Sbjct: 634 DGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIIL 693

Query: 540 LSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLI 599
              C+         L Q +    ++        +   ++K      A      +   GL+
Sbjct: 694 GGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLL 753

Query: 600 PDE 602
           P+E
Sbjct: 754 PNE 756



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 100/426 (23%), Positives = 186/426 (43%), Gaps = 6/426 (1%)

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG--FYPNVRMFEILLNCFCKMGRIAEA 239
           +PN  S++I L  LC  +      D+  MM ++G    PNV  +  +++ F K G   +A
Sbjct: 225 VPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKA 284

Query: 240 YQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG 299
             L   M   G    V  + ++ID   + R +D A  +  +M  NG  P+ VTY  +I G
Sbjct: 285 CSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHG 344

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
           +        A      ++S G  P++V  N  +  L K G   +A +++D +      PD
Sbjct: 345 YATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPD 404

Query: 360 SYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYN 416
             ++C+LL      G F+ +  L   ++   + AD  V+N L+  + K G  + A+ ++ 
Sbjct: 405 IVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFT 464

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
            M  +G +PD  ++  ++       ++ +A+  +  +V      N  V+ +I+      G
Sbjct: 465 EMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHG 524

Query: 477 RCHKAIQLFRRAIVEKYPL-DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
              KA +L    I +  P  D+V +   I  L + GR  +A+ ++  +  I   P+  T+
Sbjct: 525 GLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITF 584

Query: 536 RVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCN 595
             ++  +C    +    ++L  +    +E D  T   L    FK    +  +    EM  
Sbjct: 585 TSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQR 644

Query: 596 LGLIPD 601
            G+ P+
Sbjct: 645 KGVKPN 650



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 74/382 (19%), Positives = 164/382 (42%), Gaps = 39/382 (10%)

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           I  E+ + G      T+   +  + R       +E F++M   G  PNT   + ++    
Sbjct: 462 IFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFC 521

Query: 166 KIGRVDLGIKVLKE-----TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV 220
             G +    +++ E        P+ + FN  + +LCK   V +  D+  ++   G  P+V
Sbjct: 522 MHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDV 581

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
             F  L++ +C +G++ +A+++L  M  +G    +  ++ L+DG+ +  R++    L+ +
Sbjct: 582 ITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFRE 641

Query: 281 MVQNGCSPNVVTYTSLIKG-FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
           M + G  PN VTY  ++ G F   +  +    F +M+ES G    +  + +++  L +  
Sbjct: 642 MQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIES-GTTVTVSIYGIILGGLCRNN 700

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALL 399
             D+A+ ++  L  + +                  +FS              + + N ++
Sbjct: 701 CADEAIILFQKLGTMNV------------------KFS--------------ITILNTMI 728

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
           +   K     +A +L+ T+   G  P+  ++  ++  L     +++A N++  +  +   
Sbjct: 729 NAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIV 788

Query: 460 VNAHVHTAIVDRLIEAGRCHKA 481
             + +   I+  L+E G   KA
Sbjct: 789 PGSRLLNRIIRMLLEKGEIAKA 810



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 68/308 (22%), Positives = 108/308 (35%), Gaps = 58/308 (18%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV +F  +I     L G+ +    I+  +  VG      T+   L  Y++       L  
Sbjct: 580 DVITFTSLIDGYC-LVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTL 638

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDV 201
           F EM R G  PNT    I++  LF+ GR     K   E                      
Sbjct: 639 FREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHE---------------------- 676

Query: 202 SNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVL 261
                    M+  G    V ++ I+L   C+     EA  L   + T+    S+     +
Sbjct: 677 ---------MIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTM 727

Query: 262 IDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH 321
           I+   +++R + A  L+  +  +G  PN  TY  +I   ++      A +    +E  G 
Sbjct: 728 INAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGI 787

Query: 322 APDLVFHNVLIDCL------SKMGSYDDALDVYDGLLE--------------------LK 355
            P     N +I  L      +K G+Y   +D    LLE                    +K
Sbjct: 788 VPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYHEDMK 847

Query: 356 LVPDSYTF 363
           L+P  Y F
Sbjct: 848 LLPAKYNF 855


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 111/495 (22%), Positives = 217/495 (43%), Gaps = 42/495 (8%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNV 204
           G  P+  +   V++  FK G  D       ++L    LP+ +++N  +  LCK   +   
Sbjct: 191 GSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKA 250

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
            +V+  MV+ G  P+   +  +L+ +C  G+  EA   L  M + G    V  +++L+D 
Sbjct: 251 MEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDY 310

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
             +  R   A  +++ M + G  P + TY +L++G+            LD++   G  PD
Sbjct: 311 LCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPD 370

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS------- 377
               ++LI   +  G  D A+ V+  + +  L P++ T+ +++  +C SGR         
Sbjct: 371 HYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFE 430

Query: 378 ------LLP------KLVCGL------EVEADLVV-------------YNALLSYFCKAG 406
                 L P       L+ GL      E   +L++             +N+++   CK G
Sbjct: 431 QMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEG 490

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
              ++ KL+  M+  G  P+  ++  L+ G C A K+DEA+ +  G+V      N   ++
Sbjct: 491 RVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYS 550

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
            +++   +  R   A+ LF+         D+++Y + ++GL +  RT  A  LY ++   
Sbjct: 551 TLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITES 610

Query: 527 AVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSA 586
                  TY ++L   CK +      ++ Q++    ++L+  T   +   + K   +  A
Sbjct: 611 GTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEA 670

Query: 587 VNQLVEMCNLGLIPD 601
            +  V   + GL+P+
Sbjct: 671 KDLFVAFSSNGLVPN 685



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 125/540 (23%), Positives = 221/540 (40%), Gaps = 84/540 (15%)

Query: 142 FDEMGRFG---FTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF----LSFNIALCN 194
           ++ M R G    TP+     I++    + GR+DLG   L       F    ++F   L  
Sbjct: 72  YNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 131

Query: 195 LCKLNDVSNVKD-VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT---LG 250
           LC     S+  D V+  M   G  PNV  + ILL   C   R  EA +LL +M      G
Sbjct: 132 LCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGG 191

Query: 251 TSLSVNAWTVLIDGFR-----------------------------------RLRRLDMAG 275
           +   V ++T +I+GF                                    + + +D A 
Sbjct: 192 SPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAM 251

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
            +   MV+NG  P+ +TY S++ G+  +     A  FL  + S+G  PD+V +++L+D L
Sbjct: 252 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYL 311

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG-------------RFSLLPK- 381
            K G   +A  ++D + +  L P+  T+ +LL      G             R  + P  
Sbjct: 312 CKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDH 371

Query: 382 -----LVCGLEVEA-------------------DLVVYNALLSYFCKAGFPNQAVKLYNT 417
                L+C    +                    + V Y A++   CK+G    A+  +  
Sbjct: 372 YVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQ 431

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           M+D+G +P N  +  L+ GLC   K + A  +   ++     +N     +I+D   + GR
Sbjct: 432 MIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 491

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
             ++ +LF   +      +V++Y   I G    G+ +EA  L S M  + + PN  TY  
Sbjct: 492 VIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYST 551

Query: 538 MLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLG 597
           ++  +CK   ++    L +++  + +  D  T   + + +F+   +++A    V +   G
Sbjct: 552 LINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESG 611



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/470 (21%), Positives = 208/470 (44%), Gaps = 8/470 (1%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
            R    DV +++ +I+ + +     +    ++  + + G +    T+   L  Y      
Sbjct: 224 DRGILPDVVTYNSIIAALCKAQA-MDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQP 282

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIA 191
              +    +M   G  P+    +++MD L K GR     K+     K    P   ++   
Sbjct: 283 KEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTL 342

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           L        +  +  ++ +MVR G +P+  +F IL+  +   G++ +A  +   M   G 
Sbjct: 343 LQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGL 402

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
           + +   +  +I    +  R++ A   +E+M+  G SP  + Y SLI G      +  A  
Sbjct: 403 NPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEE 462

Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
            +  +   G   + +F N +ID   K G   ++  +++ ++ + + P+  T+ +L++  C
Sbjct: 463 LILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYC 522

Query: 372 LSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
           L+G+     KL+ G+    ++ + V Y+ L++ +CK      A+ L+  M   G +PD  
Sbjct: 523 LAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDII 582

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
           ++  +L+GL   R+   A  +Y  I  +   +    +  I+  L +      A+Q+F+  
Sbjct: 583 TYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNL 642

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            +    L+  ++ + I  LL+ GR +EA  L+       + PN +TYR+M
Sbjct: 643 CLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 692



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 90/459 (19%), Positives = 188/459 (40%), Gaps = 72/459 (15%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G    + G++  + R G       F + +  Y         +  F +M + G  PN    
Sbjct: 350 GALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTY 409

Query: 158 NIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVI----- 208
             V+ +L K GRV+  +    +++ E   P  + +N  +  LC  N     +++I     
Sbjct: 410 GAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLD 469

Query: 209 ------------------------------GMMVRKGFYPNVRMFEILLNCFCKMGRIAE 238
                                          +MVR G  PNV  +  L+N +C  G++ E
Sbjct: 470 RGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDE 529

Query: 239 AYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIK 298
           A +LL  M+++G   +   ++ LI+G+ ++ R++ A  L+++M  +G SP+++TY  +++
Sbjct: 530 AMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQ 589

Query: 299 GFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP 358
           G  + +  + A      +   G   +L  +N+++  L K    DDAL ++  L       
Sbjct: 590 GLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNL------- 642

Query: 359 DSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
                                    C ++++ +   +N ++    K G  ++A  L+   
Sbjct: 643 -------------------------CLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAF 677

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
              G  P+ +++  +   + G   ++E   ++  +  N   V++ +   IV  L++ G  
Sbjct: 678 SSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEI 737

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAY 517
            +A         + + L+  + ++ I  LL GG+ +E Y
Sbjct: 738 TRAGTYLSMIDEKHFSLEASTASLFI-DLLSGGKYQEYY 775



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 98/219 (44%), Gaps = 4/219 (1%)

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
           EV  DL  Y  L+   C+AG  +        ++ KGF  D  +F  LL+GLC  ++  +A
Sbjct: 82  EVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 141

Query: 447 IN-VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK---YPLDVVSYTV 502
           ++ V + +       N   +  ++  L +  R  +A++L      ++    P DVVSYT 
Sbjct: 142 MDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTT 201

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
            I G  + G +++AY  Y +M    + P+  TY  ++ + CK + +     +L  ++   
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261

Query: 563 IELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           +  D  T   +            A+  L +M + G+ PD
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPD 300


>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 814

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 118/522 (22%), Positives = 225/522 (43%), Gaps = 12/522 (2%)

Query: 48  LAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIV 107
           L P  V + L +   + +AL FF W  +Q  Y HD   +  M+ V+++ T   +  R ++
Sbjct: 175 LKPSQVCAVLRSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSK-TKMCQGARRVL 233

Query: 108 GELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKI 167
             + R G     + FL  +  Y R       L+    M R G  PN    N  +DV  + 
Sbjct: 234 VLMKRRGIYRTPEAFLRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRA 293

Query: 168 GRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMF 223
            R++  ++ L+  Q+    PN +++N  +   C L+ V    +++  M  KG  P+   +
Sbjct: 294 NRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSY 353

Query: 224 EILLNCFCKMGRIAEAYQLLGLMITL-GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
             ++   CK  RI E   L+  M    G       +  LI    +    D A +  +   
Sbjct: 354 YTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAE 413

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH-APDLVFHNVLIDCLSKMGSY 341
           + G   + V Y++++    +    S A   ++ + S+GH  PD+V +  +++   ++G  
Sbjct: 414 EKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEV 473

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA----DLVVYNA 397
           D A  +   +      P++ ++ +LL+ +C +G+ SL  + +  +  E     + + Y+ 
Sbjct: 474 DKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGK-SLEAREMMNMSEEQWWSPNSITYSV 532

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
           L+    K G  ++A  +   M+ KGF P       LL+ LC   +  EA    +  +   
Sbjct: 533 LMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKG 592

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAY 517
            A+N    T ++    +      A+ +     +     DV +YT  +  L + GR  EA 
Sbjct: 593 CAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDALGKKGRIAEAT 652

Query: 518 ILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
            L  +M H  + P   TYR ++  +C+   +  +  +L+ +I
Sbjct: 653 ELMKKMLHKGIDPTPVTYRTVIHRYCQMEKVDDLVAILEKMI 694



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 102/446 (22%), Positives = 180/446 (40%), Gaps = 40/446 (8%)

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           L K       + V+ +M R+G Y     F  ++  + + G++ +A ++L LM   G   +
Sbjct: 220 LSKTKMCQGARRVLVLMKRRGIYRTPEAFLRVMVSYSRAGQLRDALKVLTLMQRAGVEPN 279

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           +      ID F R  RL+ A    E+M   G  PNVVTY  +I+G+ +      A   LD
Sbjct: 280 LLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLD 339

Query: 315 MLESEGHAP------------------------------------DLVFHNVLIDCLSKM 338
            + S+G  P                                    D V +N LI  L+K 
Sbjct: 340 DMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKH 399

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLVCGLEVEADLVV 394
              D+AL       E     D   + +++  +C  GR S    L+ +++       D+V 
Sbjct: 400 DHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVT 459

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           Y A+++ FC+ G  ++A KL   M   G+ P+  S+  LL GLC   K  EA  +     
Sbjct: 460 YTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSE 519

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
               + N+  ++ ++  L + G+  +A  + R  +++ +    V   + ++ L   GRT 
Sbjct: 520 EQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTH 579

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLT 574
           EA     +  +     N   +  ++  FC+   +     +L D+       D  T   L 
Sbjct: 580 EARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLV 639

Query: 575 KFIFKFHSSSSAVNQLVEMCNLGLIP 600
             + K    + A   + +M + G+ P
Sbjct: 640 DALGKKGRIAEATELMKKMLHKGIDP 665



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 75/383 (19%), Positives = 157/383 (40%), Gaps = 48/383 (12%)

Query: 99  RFETVRGIVGELARVGCVIKAQ-TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           R   VR ++ ++A+   +++ Q T+   + +  + +     L    +    GF  +    
Sbjct: 365 RIVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGY 424

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQL-----PNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
           + ++  L K GR+     ++ E        P+ +++   +   C+L +V   K ++ +M 
Sbjct: 425 SAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMH 484

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR----- 267
             G+ PN   +  LLN  C+ G+  EA +++ +      S +   ++VL+ G R+     
Sbjct: 485 THGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLS 544

Query: 268 -----LRRLDMAGY-------------------------LWEKMVQNGCSPNVVTYTSLI 297
                +R + + G+                           E+ +  GC+ NVV +T++I
Sbjct: 545 EACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVI 604

Query: 298 KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
            GF +      A S LD +       D+  +  L+D L K G   +A ++   +L   + 
Sbjct: 605 HGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKMLHKGID 664

Query: 358 PDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVK 413
           P   T+ +++   C   +     ++L K++   + +    +YN ++   C  G   +A K
Sbjct: 665 PTPVTYRTVIHRYCQMEKVDDLVAILEKMILRQKCK---TIYNQVIEKLCGLGKLEEADK 721

Query: 414 LYNTMLDKGFTPDNYSFVGLLRG 436
           L   +L      D  +   L+ G
Sbjct: 722 LLGKVLRTASRSDAKTCYALMEG 744


>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
 gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
          Length = 353

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 89/319 (27%), Positives = 163/319 (51%), Gaps = 7/319 (2%)

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNI 190
           Y   ++  DEM   G TP+    N+V++ + + GRVD  I+ LK        PN +S+NI
Sbjct: 8   YKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNI 67

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            L  LC      + ++++G M +KG  PNV  F +L++  C+ G +  A ++L  +   G
Sbjct: 68  VLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYG 127

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
            + +  ++  L+  F + +++D A    + MV  GC P++V+Y +L+     +    +A 
Sbjct: 128 CTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAV 187

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
             L  L+ +G AP L+ +N +ID L+K G   +AL++ + ++   L PD  T+ ++ + +
Sbjct: 188 ELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGL 247

Query: 371 CLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           C   R     +    V  + +  + V+YNA++   CK    + A+ L+  M+  G  P+ 
Sbjct: 248 CREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNE 307

Query: 428 YSFVGLLRGLCGARKIDEA 446
            ++  L+ GL     I EA
Sbjct: 308 STYTILIEGLAYEGLIKEA 326



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 86/331 (25%), Positives = 155/331 (46%), Gaps = 3/331 (0%)

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
           CK +       ++  M  KG  P++  + +++N  C+ GR+ +A + L  + + G   + 
Sbjct: 3   CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
            ++ +++ G     R + A  L  +M Q GC PNVVT+  LI       +   A   L+ 
Sbjct: 63  VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 122

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
           +   G  P+ + +N L+    K    D A+   D ++     PD  ++ +LL+ +C SG 
Sbjct: 123 IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGE 182

Query: 376 FSLLPKLVCGLEVEAD---LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
             +  +L+  L+ +     L+ YN ++    KAG   +A++L N M+ KG  PD  ++  
Sbjct: 183 VDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYST 242

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           +  GLC   +I++AI  +  +       N  ++ AI+  L +    H AI LF   I   
Sbjct: 243 IAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNG 302

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQM 523
              +  +YT+ I GL   G  +EA  L  ++
Sbjct: 303 CMPNESTYTILIEGLAYEGLIKEARDLLDEL 333



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 132/277 (47%), Gaps = 11/277 (3%)

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           L ++M   GC+P++VTY  ++ G  +      A  FL  L S G  P+ V +N+++  L 
Sbjct: 14  LLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLC 73

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-------FSLLPKLVCGLEVE 389
               ++DA ++   + +    P+  TF  L+S +C  G           +PK  C     
Sbjct: 74  TAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGC----T 129

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            + + YN LL  FCK    ++A+   + M+ +G  PD  S+  LL  LC + ++D A+ +
Sbjct: 130 PNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVEL 189

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
              +     A     +  ++D L +AG+  +A++L    + +    D+++Y+    GL  
Sbjct: 190 LHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCR 249

Query: 510 GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
             R E+A   + +++ + + PN   Y  ++L  CK R
Sbjct: 250 EDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRR 286



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 86/331 (25%), Positives = 149/331 (45%), Gaps = 3/331 (0%)

Query: 231 CKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNV 290
           CK     +A +LL  M   G +  +  + V+++G  +  R+D A    + +   GC PN 
Sbjct: 3   CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62

Query: 291 VTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDG 350
           V+Y  ++KG   A+ +  A   +  +  +G  P++V  N+LI  L + G  + AL+V + 
Sbjct: 63  VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 122

Query: 351 LLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGF 407
           + +    P+S ++  LL   C   +         L+       D+V YN LL+  C++G 
Sbjct: 123 IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGE 182

Query: 408 PNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTA 467
            + AV+L + + DKG  P   S+  ++ GL  A K  EA+ +   +V      +   ++ 
Sbjct: 183 VDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYST 242

Query: 468 IVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIA 527
           I   L    R   AI+ F +        + V Y   I GL +   T  A  L++ M    
Sbjct: 243 IAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNG 302

Query: 528 VPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
             PN  TY +++     E  IK  + LL ++
Sbjct: 303 CMPNESTYTILIEGLAYEGLIKEARDLLDEL 333



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 135/297 (45%), Gaps = 5/297 (1%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D+ +++ +++ + +  GR +     +  L   GC     ++ + L+     E +    E 
Sbjct: 26  DIVTYNVVVNGICQ-EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEEL 84

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
             EMG+ G  PN    N+++  L + G V+  ++VL++       PN LS+N  L   CK
Sbjct: 85  MGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCK 144

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              +      + +MV +G YP++  +  LL   C+ G +  A +LL  +   G +  + +
Sbjct: 145 QKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLIS 204

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  +IDG  +  +   A  L  +MV  G  P+++TY+++  G         A      ++
Sbjct: 205 YNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQ 264

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
             G  P+ V +N +I  L K      A+D++  ++    +P+  T+  L+  +   G
Sbjct: 265 DMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEG 321



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 69/300 (23%), Positives = 140/300 (46%), Gaps = 3/300 (1%)

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
           +  A   LD +  +G  PD+V +NV+++ + + G  DDA++    L      P++ ++  
Sbjct: 8   YKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNI 67

Query: 366 LLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
           +L  +C + R+    +L+  +  +    ++V +N L+S+ C+ G    A+++   +   G
Sbjct: 68  VLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYG 127

Query: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI 482
            TP++ S+  LL   C  +K+D+A+     +V      +   +  ++  L  +G    A+
Sbjct: 128 CTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAV 187

Query: 483 QLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
           +L  +   +     ++SY   I GL + G+T+EA  L ++M    + P+  TY  +    
Sbjct: 188 ELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGL 247

Query: 543 CKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
           C+E  I+   R    V D  I  +      +   + K   + SA++    M   G +P+E
Sbjct: 248 CREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNE 307



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/266 (23%), Positives = 121/266 (45%), Gaps = 4/266 (1%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           R+E    ++GE+ + GC     TF + +    R  +    LE  +++ ++G TPN+ + N
Sbjct: 77  RWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYN 136

Query: 159 IVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
            ++    K  ++D  +  L         P+ +S+N  L  LC+  +V    +++  +  K
Sbjct: 137 PLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDK 196

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           G  P +  +  +++   K G+  EA +LL  M++ G    +  ++ +  G  R  R++ A
Sbjct: 197 GCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDA 256

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
              + K+   G  PN V Y ++I G  + +    A      +   G  P+   + +LI+ 
Sbjct: 257 IRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEG 316

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDS 360
           L+  G   +A D+ D L    +V  S
Sbjct: 317 LAYEGLIKEARDLLDELCSRGVVRKS 342


>gi|297842914|ref|XP_002889338.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335180|gb|EFH65597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 712

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 134/545 (24%), Positives = 227/545 (41%), Gaps = 65/545 (11%)

Query: 57  LLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARV--G 114
           L+  P+D   L FF W    + + H  QSF  M+  + R        R  +  + +   G
Sbjct: 80  LIKVPAD--GLRFFDWVY-NKGFSHKEQSFFLMLEFLGR-ARNLNAARNFLFSIEKRSNG 135

Query: 115 CV-IKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG 173
           CV ++ + F   +R Y    ++   +  F  M + G +P+    N ++ +L K GR  + 
Sbjct: 136 CVKLQDRYFNSLIRSYGNAGLFQESVNLFQTMKKMGISPSVLTFNSLLSILLKRGRTGMA 195

Query: 174 IKVLKETQ-----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLN 228
             +  E +      P+  +FN  +   CK + V     +   M      P+V  +  +++
Sbjct: 196 HDMFDEMRRTYGVTPDSYTFNTLISGFCKNSMVDQAFTIFKEMELYSCNPDVVTYNTIID 255

Query: 229 CFCKMGRIAEAYQLLGLMITLGTSLSVN--AWTVLIDGFRRLRRLDMAGYLWEKMVQNGC 286
             C+ G++  A+ LL  M+   T++  N  ++T L+ G+   + +D A  ++ +M+  G 
Sbjct: 256 GLCRAGKVKIAHNLLNGMLKKATAVHPNIVSYTTLLRGYCMKQEIDEALLVFHEMLTRGL 315

Query: 287 SPNVVTYTSLIKGFMEAKMFSIAFSFL---DMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
            PN VTY +LIKG  EA  +     FL   D   +   +PD    N+LI      G  D 
Sbjct: 316 KPNAVTYNTLIKGLSEAHRYDEIKGFLIGGDAFTT--FSPDACTFNILIKAHCDAGHLDA 373

Query: 344 ALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL----------EVEADLV 393
           A+ V+  +L +KL PDS ++  L+ T+CL   F     L   L          E +    
Sbjct: 374 AMKVFQEMLNMKLHPDSASYSVLIRTLCLRNEFDKAETLFNELFEKEVLLGKNECKPLAA 433

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            YN +  Y C  G   QA K++  ++ +G   D  S+  L+ GLC   K   A   Y+ +
Sbjct: 434 AYNLMFEYLCANGKAKQAEKVFRQLMKRG-AQDPSSYRTLITGLCREGKFKAA---YELL 489

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
           V+                            + RR  V     D  +Y V I GLL+ G  
Sbjct: 490 VL----------------------------MLRREFVP----DPETYEVLIDGLLKIGEA 517

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
             A+    +M   +  P A T+  +L    K +       LL  +++ RI  +   S + 
Sbjct: 518 LLAHDTLQRMLRSSYLPVATTFHSVLAELVKRKFANDSFGLLTVMLEKRIRQNIDLSTQA 577

Query: 574 TKFIF 578
            + +F
Sbjct: 578 VRLVF 582



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 107/511 (20%), Positives = 194/511 (37%), Gaps = 86/511 (16%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGR-FGFTPNTFA 156
           G F+    +   + ++G      TF   L I  +    GM  + FDEM R +G TP+++ 
Sbjct: 155 GLFQESVNLFQTMKKMGISPSVLTFNSLLSILLKRGRTGMAHDMFDEMRRTYGVTPDSYT 214

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N ++    K   VD    + KE +L    P+ +++N  +  LC+   V    +++  M+
Sbjct: 215 FNTLISGFCKNSMVDQAFTIFKEMELYSCNPDVVTYNTIIDGLCRAGKVKIAHNLLNGML 274

Query: 213 RKG--FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           +K    +PN+  +  LL  +C    I EA  +   M+T G   +   +  LI G     R
Sbjct: 275 KKATAVHPNIVSYTTLLRGYCMKQEIDEALLVFHEMLTRGLKPNAVTYNTLIKGLSEAHR 334

Query: 271 LD-MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS-FLDMLESEGHAPDLVFH 328
            D + G+L         SP+  T+  LIK   +A     A   F +ML  + H PD   +
Sbjct: 335 YDEIKGFLIGGDAFTTFSPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLH-PDSASY 393

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLV------------------------------- 357
           +VLI  L     +D A  +++ L E +++                               
Sbjct: 394 SVLIRTLCLRNEFDKAETLFNELFEKEVLLGKNECKPLAAAYNLMFEYLCANGKAKQAEK 453

Query: 358 ----------PDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCK 404
                      D  ++ +L++ +C  G+F    +L+  +   E   D   Y  L+    K
Sbjct: 454 VFRQLMKRGAQDPSSYRTLITGLCREGKFKAAYELLVLMLRREFVPDPETYEVLIDGLLK 513

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV 464
            G    A      ML   + P   +F  +L  L   +  +++  +   ++      N  +
Sbjct: 514 IGEALLAHDTLQRMLRSSYLPVATTFHSVLAELVKRKFANDSFGLLTVMLEKRIRQNIDL 573

Query: 465 HTAIVDRLIEAGRCHKAIQLFR---------------------RAIVEKYPL-------- 495
            T  V  +  + +  KA  + R                     R +++ + L        
Sbjct: 574 STQAVRLVFSSAQKEKAFLIVRLLYDNGYLIKMEELLDFLCENRKLLDAHTLVLFCLEKS 633

Query: 496 ---DVVSYTVAIRGLLEGGRTEEAYILYSQM 523
              D+ +    I GL +  R  EA+ LY+++
Sbjct: 634 QMVDIDTCNTIIEGLCKHKRHSEAFSLYNEL 664



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 105/514 (20%), Positives = 174/514 (33%), Gaps = 120/514 (23%)

Query: 83  VQSFDHMISVVTRLTGRFETVRGIVGELARV-GCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           V +F+ ++S++ +  GR      +  E+ R  G    + TF   +  + +  M       
Sbjct: 176 VLTFNSLLSILLK-RGRTGMAHDMFDEMRRTYGVTPDSYTFNTLISGFCKNSMVDQAFTI 234

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL-----KETQL-PNFLSFNIALCNL 195
           F EM  +   P+    N ++D L + G+V +   +L     K T + PN +S+   L   
Sbjct: 235 FKEMELYSCNPDVVTYNTIIDGLCRAGKVKIAHNLLNGMLKKATAVHPNIVSYTTLLRGY 294

Query: 196 CKLNDVSNVKDVIGMMVRKG------------------------------------FYPN 219
           C   ++     V   M+ +G                                    F P+
Sbjct: 295 CMKQEIDEALLVFHEMLTRGLKPNAVTYNTLIKGLSEAHRYDEIKGFLIGGDAFTTFSPD 354

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA----G 275
              F IL+   C  G +  A ++   M+ +       +++VLI         D A     
Sbjct: 355 ACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCLRNEFDKAETLFN 414

Query: 276 YLWEKMV---QNGCSP----------------------------------NVVTYTSLIK 298
            L+EK V   +N C P                                  +  +Y +LI 
Sbjct: 415 ELFEKEVLLGKNECKPLAAAYNLMFEYLCANGKAKQAEKVFRQLMKRGAQDPSSYRTLIT 474

Query: 299 GFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP 358
           G      F  A+  L ++      PD   + VLID L K+G    A D    +L    +P
Sbjct: 475 GLCREGKFKAAYELLVLMLRREFVPDPETYEVLIDGLLKIGEALLAHDTLQRMLRSSYLP 534

Query: 359 DSYTFCSLLS---------------TVCLSGR---------------FSLLPK-----LV 383
            + TF S+L+               TV L  R               FS   K     +V
Sbjct: 535 VATTFHSVLAELVKRKFANDSFGLLTVMLEKRIRQNIDLSTQAVRLVFSSAQKEKAFLIV 594

Query: 384 CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
             L     L+    LL + C+      A  L    L+K    D  +   ++ GLC  ++ 
Sbjct: 595 RLLYDNGYLIKMEELLDFLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTIIEGLCKHKRH 654

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
            EA ++Y  +V          H  + + L  AG+
Sbjct: 655 SEAFSLYNELVELGNHQQLSCHVVLTNALEAAGK 688



 Score = 47.8 bits (112), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 77/375 (20%), Positives = 149/375 (39%), Gaps = 45/375 (12%)

Query: 99  RFETVRG-IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           R++ ++G ++G  A       A TF + ++ +         ++ F EM      P++ + 
Sbjct: 334 RYDEIKGFLIGGDAFTTFSPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASY 393

Query: 158 NIVMDVLFKIGRVDLGIKVL-----KETQL------PNFLSFNIALCNLCKLNDVSNVKD 206
           ++++  L      D    +      KE  L      P   ++N+    LC        + 
Sbjct: 394 SVLIRTLCLRNEFDKAETLFNELFEKEVLLGKNECKPLAAAYNLMFEYLCANGKAKQAEK 453

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
           V   ++++G   +   +  L+   C+ G+   AY+LL LM+          + VLIDG  
Sbjct: 454 VFRQLMKRG-AQDPSSYRTLITGLCREGKFKAAYELLVLMLRREFVPDPETYEVLIDGLL 512

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD-MLES------- 318
           ++    +A    ++M+++   P   T+ S++   ++ K  + +F  L  MLE        
Sbjct: 513 KIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELVKRKFANDSFGLLTVMLEKRIRQNID 572

Query: 319 -EGHAPDLVFHN-------VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
               A  LVF +       +++  L   G      ++ D L E + + D++T    L   
Sbjct: 573 LSTQAVRLVFSSAQKEKAFLIVRLLYDNGYLIKMEELLDFLCENRKLLDAHT----LVLF 628

Query: 371 CLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           CL        ++V       D+   N ++   CK    ++A  LYN +++ G        
Sbjct: 629 CLEK-----SQMV-------DIDTCNTIIEGLCKHKRHSEAFSLYNELVELGNHQQLSCH 676

Query: 431 VGLLRGLCGARKIDE 445
           V L   L  A K +E
Sbjct: 677 VVLTNALEAAGKWEE 691


>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
 gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
 gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 104/413 (25%), Positives = 200/413 (48%), Gaps = 19/413 (4%)

Query: 160 VMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG 215
           V+ V+ K+ + D+ I +  + +      +  SF I +   C+ + +S    ++G M++ G
Sbjct: 85  VLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLG 144

Query: 216 FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAG 275
           F P++     LLN FC+  R  EA  L+  M   G   +V  +  +I+G  + R L+ A 
Sbjct: 145 FRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNAL 204

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
            ++  M + G   + VTY +LI G   +  ++ A   L  +      P+++F   LID  
Sbjct: 205 EVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTF 264

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG-------RFSLLPKLVCGLEV 388
            K G+  +A ++Y  ++   +VP+ +T+ SL++  C+ G        F L+    C    
Sbjct: 265 VKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCF--- 321

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
             D+V YN L++ FCK+      +KL+  M  +G   D +++  L+ G C A K++ A  
Sbjct: 322 -PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQK 380

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           V+  +V    + +   +  ++D L   G+  KA+ +       +  +D+++Y + I+GL 
Sbjct: 381 VFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLC 440

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE----RNIKMVKRLLQD 557
              + +EA+ L+  +    V P+A  Y  M+   C++       K+ +R+ +D
Sbjct: 441 RTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKED 493



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 110/460 (23%), Positives = 198/460 (43%), Gaps = 43/460 (9%)

Query: 83  VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF 142
           +  F  +++V+ ++  +F+ V  +  ++  +G      +F + +  + R     + L   
Sbjct: 79  IVDFTRVLTVIAKMN-KFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALL 137

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKL 198
            +M + GF P+      +++   +  R    + ++        +PN + +N  +  LCK 
Sbjct: 138 GKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKN 197

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
            D++N  +V   M +KG   +   +  L++     GR  +A +LL  M+      +V  +
Sbjct: 198 RDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFF 257

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
           T LID F +   L  A  L+++M++    PNV TY SLI GF                  
Sbjct: 258 TALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF------------------ 299

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL 378
                          C+   G   DA  ++D ++     PD  T+ +L++  C S R   
Sbjct: 300 ---------------CIH--GCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVED 342

Query: 379 LPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
             KL C +  +    D   YN L+  +C+AG  N A K++N M+D G +PD  ++  LL 
Sbjct: 343 GMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLD 402

Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
            LC   KI++A+ + + +  +   V+   +  I+  L    +  +A  LFR    +    
Sbjct: 403 CLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKP 462

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
           D ++Y   I GL   G   EA  L  +MK     P+   Y
Sbjct: 463 DAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY 502



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 98/424 (23%), Positives = 197/424 (46%), Gaps = 12/424 (2%)

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
           P++  F  +L    KM +      L   M  LG S  + ++T+LI  F R  RL +A  L
Sbjct: 77  PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 136

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
             KM++ G  P++VT  SL+ GF +   F  A S +D ++  G  P++V +N +I+ L K
Sbjct: 137 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 196

Query: 338 MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVV 394
               ++AL+V+  + +  +  D+ T+ +L+S +  SGR++   +L+  +   +++ +++ 
Sbjct: 197 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 256

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           + AL+  F K G   +A  LY  M+ +   P+ +++  L+ G C    + +A  ++  +V
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 316

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
                 +   +  ++    ++ R    ++LF     +    D  +Y   I G  + G+  
Sbjct: 317 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLN 376

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLT 574
            A  ++++M    V P+  TY ++L   C    I+    +++D+  + +++D  T   + 
Sbjct: 377 VAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIII 436

Query: 575 KFIFKFHSSSSAVNQLVEMCNLGLIPDE---------MWRKLGLLSDETMTPVSLFDGFV 625
           + + +      A      +   G+ PD          + RK      + +      DGF+
Sbjct: 437 QGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFM 496

Query: 626 PCER 629
           P ER
Sbjct: 497 PSER 500



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 68/283 (24%), Positives = 126/283 (44%), Gaps = 3/283 (1%)

Query: 270 RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHN 329
           + D A  L+ +M+Q+   P++V +T ++    +   F I       +E+ G + DL    
Sbjct: 59  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118

Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV---CGL 386
           +LI C  +      AL +   +++L   P   T  SLL+  C   RF     LV    G 
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
               ++V+YN +++  CK    N A++++  M  KG   D  ++  L+ GL  + +  +A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
             + + +V      N    TA++D  ++ G   +A  L++  I      +V +Y   I G
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
               G   +A  ++  M      P+  TY  ++  FCK + ++
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVE 341



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 119/255 (46%), Gaps = 5/255 (1%)

Query: 293 YTSLIKGFMEAKMFSIAFS-FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGL 351
           Y   ++  +    F  AFS F +ML+S    P +V    ++  ++KM  +D  + +Y  +
Sbjct: 47  YRERLRNELHCIKFDDAFSLFCEMLQSRP-IPSIVDFTRVLTVIAKMNKFDIVIYLYHKM 105

Query: 352 LELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFP 408
             L +  D Y+F  L+   C   R SL   L   +  L     +V   +LL+ FC+    
Sbjct: 106 ENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRF 165

Query: 409 NQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAI 468
            +AV L ++M   GF P+   +  ++ GLC  R ++ A+ V+  +       +A  +  +
Sbjct: 166 QEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTL 225

Query: 469 VDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAV 528
           +  L  +GR   A +L R  +  K   +V+ +T  I   ++ G   EA  LY +M   +V
Sbjct: 226 ISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSV 285

Query: 529 PPNAYTYRVMLLSFC 543
            PN +TY  ++  FC
Sbjct: 286 VPNVFTYNSLINGFC 300


>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
          Length = 933

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 110/464 (23%), Positives = 202/464 (43%), Gaps = 39/464 (8%)

Query: 182 LP-NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAY 240
           LP + + +N  +   C+   V   + V+ MM   G  PNV  +   +  +C+   + EA+
Sbjct: 200 LPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAF 259

Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
            L   M+  G  L V   + L+ G  R  R   A  L+ +M + G +PN VTY +LI   
Sbjct: 260 DLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSL 319

Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
            +A       S L  + S G   DLV +  L+D L K G  D+  D     L   L P+ 
Sbjct: 320 AKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNG 379

Query: 361 YTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
            T+  L+  +C +       +++  +E   +  ++V ++++++ F K G  ++A +    
Sbjct: 380 VTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRM 439

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           M ++G  P+  ++  L+ G    +  D A+ VY  ++     VN  +  ++V+ L + G+
Sbjct: 440 MKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGK 499

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG--------------------------- 510
             +A+ LF+ A      LD V+YT  I GL +                            
Sbjct: 500 IEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNV 559

Query: 511 --------GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
                   G+ +EA    ++M+++ + P+  TY  M++S C++       +LL ++  + 
Sbjct: 560 FINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSS 619

Query: 563 IELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRK 606
           I+ +  T   L   +F   +   A   L EM + G  P  +  +
Sbjct: 620 IKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHR 663



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 126/561 (22%), Positives = 233/561 (41%), Gaps = 43/561 (7%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV +   +++ + R  GRF     +  E+ +VG      T+   +    +      +L  
Sbjct: 273 DVVTLSALVAGLCR-DGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSL 331

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCK 197
             EM   G   +      +MD L K G+ D     L+    +   PN +++ + +  LCK
Sbjct: 332 LGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCK 391

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            ++V   + V+  M  K   PNV  F  ++N F K G + +A +   +M   G + +V  
Sbjct: 392 AHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVT 451

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMV-------------------QN-------------- 284
           +  LIDGF + +  D A  ++  M+                   QN              
Sbjct: 452 YGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDAS 511

Query: 285 --GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
             G S + V YT+LI G  +A     AF F   L      PD V +NV I+CL  +G + 
Sbjct: 512 GSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFK 571

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALL 399
           +A      +  + L PD  T+ +++ + C  G  +   KL+  ++   ++ +L+ YN L+
Sbjct: 572 EAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLV 631

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
           +     G   +A  L N M+  GF+P + +   +L+    +R++D  +++++ ++     
Sbjct: 632 AGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLH 691

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            +  V+  ++  L   G   KA  +    +      D +++   I G  +    + A+  
Sbjct: 692 ADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFAT 751

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK 579
           Y+QM H  + PN  T+  +L        I     +L ++  + +E +  T   L     K
Sbjct: 752 YAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGK 811

Query: 580 FHSSSSAVNQLVEMCNLGLIP 600
             +   A+    EM   G +P
Sbjct: 812 QSNKVEAMRLYCEMVGKGFVP 832



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 93/430 (21%), Positives = 189/430 (43%), Gaps = 11/430 (2%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP----NFLSFNIALC 193
            LE + +M   G   N F  + +++ L + G+++  + + K+        + +++   + 
Sbjct: 468 ALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLID 527

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
            L K  D+         ++ +   P+  ++ + +NC C +G+  EA   L  M  +G   
Sbjct: 528 GLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKP 587

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
             + +  +I    R      A  L  +M  +   PN++TY +L+ G         A   L
Sbjct: 588 DQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLL 647

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           + + S G +P  + H  ++   S+    D  LD+++ ++   L  D   + +LL  +C  
Sbjct: 648 NEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYH 707

Query: 374 G---RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           G   + +++ + + G  +  D + +NAL+   CK+   + A   Y  ML +  +P+  +F
Sbjct: 708 GMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATF 767

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK--AIQLFRRA 488
             LL GL    +I EA  V   I M    +  +  T  +       + +K  A++L+   
Sbjct: 768 NTLLGGLESVGRIGEAGTVL--IEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEM 825

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
           + + +   V +Y   I    + G   +A  L+  M+   V P + TY +++  + + RN 
Sbjct: 826 VGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNG 885

Query: 549 KMVKRLLQDV 558
             VK+ L+D+
Sbjct: 886 TEVKKCLKDM 895



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 101/246 (41%), Gaps = 4/246 (1%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           TG  E  + ++ E+   G    + T    L+   +     ++L+  + M   G   +   
Sbjct: 637 TGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITV 696

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N ++ VL   G       VL+E       P+ ++FN  +   CK + + N       M+
Sbjct: 697 YNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQML 756

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
            +   PN+  F  LL     +GRI EA  +L  M   G   +   + +L  G  +     
Sbjct: 757 HQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKV 816

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A  L+ +MV  G  P V TY +LI  F +A M + A      ++  G  P    +++L+
Sbjct: 817 EAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILV 876

Query: 333 DCLSKM 338
              S++
Sbjct: 877 SGWSRI 882



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/212 (23%), Positives = 86/212 (40%), Gaps = 7/212 (3%)

Query: 135 YGMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLS 187
           +GM  +A    +EM   G  P+T   N ++    K   +D       ++L +   PN  +
Sbjct: 707 HGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIAT 766

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           FN  L  L  +  +     V+  M + G  PN   ++IL     K     EA +L   M+
Sbjct: 767 FNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMV 826

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
             G    V+ +  LI  F +   +  A  L++ M + G  P   TY  L+ G+   +  +
Sbjct: 827 GKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGT 886

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
                L  ++ +G +P     + +    SK G
Sbjct: 887 EVKKCLKDMKEKGFSPSKGTLSFICRAFSKPG 918



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 4/168 (2%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
           + +M     +PN    N ++  L  +GR+     VL E +     PN L+++I      K
Sbjct: 752 YAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGK 811

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            ++      +   MV KGF P V  +  L++ F K G + +A +L   M   G   +   
Sbjct: 812 QSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCT 871

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           + +L+ G+ R+R         + M + G SP+  T + + + F +  M
Sbjct: 872 YDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGM 919



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 56/246 (22%), Positives = 98/246 (39%), Gaps = 8/246 (3%)

Query: 359 DSYTFCSLLSTVCLSGRFSLL-PKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
           D  +  +LL + C   R  LL P +          V YN LL+          A  +   
Sbjct: 72  DPASLNALLYSHC---RLRLLRPAIALLRSSRPTTVAYNILLAALSDHA---HAPAVLAE 125

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           M  +G   D  +   LL GLC   ++D A  +        P +++    +++D +   G 
Sbjct: 126 MCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRAGGITPWMSSAGTLSLLD-IAGFGD 184

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
              A+ +  R   +  P+DVV Y   + G    G+ + A  +   MK   V PN  TY  
Sbjct: 185 TPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTP 244

Query: 538 MLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLG 597
            ++ +C+ + ++    L + ++   + LD  T   L   + +    S A     EM  +G
Sbjct: 245 FIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVG 304

Query: 598 LIPDEM 603
             P+ +
Sbjct: 305 AAPNHV 310


>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1016

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 111/485 (22%), Positives = 214/485 (44%), Gaps = 50/485 (10%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFD---EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL 177
           T LL+ ++ +    +G+V +  D   EM      PN +  N+++    K+G + L + +L
Sbjct: 9   TLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGNLILALDLL 68

Query: 178 KETQLP-NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
           +   +  + +++N  +                                     FC+ G +
Sbjct: 69  RNVDVEVDTVTYNTVIWG-----------------------------------FCQHGLV 93

Query: 237 AEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSL 296
            +A+  L +M+   T        +L+ GF R+        + + +V  G   +V+ + +L
Sbjct: 94  NQAFGFLSIMVKKDTCFDTITCNILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTL 153

Query: 297 IKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
           I G+ +A   S+A   ++ +  EG   D+V +N LI+   K G YD A  +   + E + 
Sbjct: 154 IDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRG 213

Query: 357 VPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYN 416
           V DS  F        +  R     K    L +EADL+ Y  ++S +CK     +A  LY 
Sbjct: 214 VKDSVFFN-------IDDRI----KKDDNLNLEADLITYTTIISTYCKQHGLEEARALYE 262

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
            M+  GF PD  ++  ++ GLC   ++ EA  + + +       N   +T ++D L +AG
Sbjct: 263 EMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAG 322

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
              +A     + +V    LD+V  T  + GL +  + +EA  ++  +  + + PN+ TY 
Sbjct: 323 SAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYT 382

Query: 537 VMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNL 596
            ++  +CK  +++ V+ LLQ++ +  I  +  T   +     K      A+N + +M + 
Sbjct: 383 ALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQ 442

Query: 597 GLIPD 601
            +IP+
Sbjct: 443 NIIPN 447



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 103/420 (24%), Positives = 194/420 (46%), Gaps = 33/420 (7%)

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
           LP+ ++++  +  LCK   +S  ++++  M + G  PN   +  L++   K G   EA+ 
Sbjct: 270 LPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFA 329

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
               ++  G +L +   T L+DG  +  +   A  ++  + +    PN +TYT+LI G+ 
Sbjct: 330 CQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYC 389

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           +        S L  +E +   P+++ ++ +I+  +K G  D+A++V   +L+  ++P++Y
Sbjct: 390 KVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAY 449

Query: 362 TFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
                                           VY  L+  +CKAG    A  LYN M   
Sbjct: 450 --------------------------------VYAILIDGYCKAGKQEIATDLYNEMKLS 477

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
           G   +N  F  L+  L   +++DEA  + + +      ++   +T+++D   +AG+   A
Sbjct: 478 GLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAA 537

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
           + +      +  P DVV+Y V I GLLE G+  EA  +YS M  + + PN  TY +M+ +
Sbjct: 538 LNMVEEMTEKSIPFDVVTYNVLINGLLEHGKY-EAKSVYSGMIEMGLAPNQATYNIMIKA 596

Query: 542 FCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           +CK+  +     L  ++   +I     T   L   + +      A+N L EM  +G+ P+
Sbjct: 597 YCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPN 656



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 111/513 (21%), Positives = 234/513 (45%), Gaps = 38/513 (7%)

Query: 102 TVRGIVGELARV-------GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNT 154
           T +GI+ E   V         +  A  + + +  Y +     +  + ++EM   G   N 
Sbjct: 424 TKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNN 483

Query: 155 FARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGM 210
              +++++ L +  R+D   ++LK+      L + +++   +    K    S   +++  
Sbjct: 484 VLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEE 543

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M  K    +V  + +L+N   + G+  EA  +   MI +G + +   + ++I  + +   
Sbjct: 544 MTEKSIPFDVVTYNVLINGLLEHGKY-EAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGE 602

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           LD A  LW +M  +   P+ +T  +L+ G  EA     A + L+ +   G  P+LV H V
Sbjct: 603 LDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRV 662

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC---LSGRFSLLPKLVCGLE 387
           L++  SK G  +  L +++ L+++ L  +   + +L+   C   ++ + + + K +    
Sbjct: 663 LLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDG 722

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
             AD V YNAL+  +C++    +A+  Y  ML++G +P+  ++  LL GL GA  + E  
Sbjct: 723 FVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERD 782

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            ++  +  N    +A  +  ++    + G   ++I+L+   + + +     +Y V I   
Sbjct: 783 ELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDF 842

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
            + G+ ++A  L ++M+   VPP++ TY +++  +C               +    +LD 
Sbjct: 843 AKVGKMDQARELLNEMQVRGVPPSSSTYDILICGWCN--------------LSKHPDLD- 887

Query: 568 HTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
               R  K I++    + A N + EM + G +P
Sbjct: 888 ----RTLKKIYR----TDAKNLITEMNDKGFVP 912



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 127/564 (22%), Positives = 227/564 (40%), Gaps = 63/564 (11%)

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
           L+++  +  + T+   +  Y +      V     EM      PN    + +++   K G 
Sbjct: 369 LSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGI 428

Query: 170 VDLGIKVLK----ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEI 225
           +D  I V+K    +  +PN   + I +   CK        D+   M   G   N  +F++
Sbjct: 429 LDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDV 488

Query: 226 LLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
           L+N   +  R+ EA +LL  + + G  L    +T L+DGF +  +   A  + E+M +  
Sbjct: 489 LVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKS 548

Query: 286 CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL 345
              +VVTY  LI G +E   +     +  M+E  G AP+   +N++I    K G  D+AL
Sbjct: 549 IPFDVVTYNVLINGLLEHGKYEAKSVYSGMIEM-GLAPNQATYNIMIKAYCKQGELDNAL 607

Query: 346 DVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS-------------LLPKLVCG------- 385
           ++++ +   K++P S T  +L+  +  +G                + P LV         
Sbjct: 608 ELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNAS 667

Query: 386 ---------LEVEADLV---------VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
                    L++   LV          YN L+  FC+     +A  +   M+  GF  D 
Sbjct: 668 SKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADT 727

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
            ++  L+RG C +  + +A+  Y  ++    + N   +  ++  L+ AG   +  +LF +
Sbjct: 728 VTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDK 787

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN 547
                   D  +Y   I G  + G  +E+  LY +M      P   TY V++  F K   
Sbjct: 788 MKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGK 847

Query: 548 IKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLV-EMCNLGLIP--DEMW 604
           +   + LL ++                  +     SSS  + L+   CNL   P  D   
Sbjct: 848 MDQARELLNEM-----------------QVRGVPPSSSTYDILICGWCNLSKHPDLDRTL 890

Query: 605 RKLGLLSDETMTPVSLFDGFVPCE 628
           +K+     + +       GFVPC+
Sbjct: 891 KKIYRTDAKNLITEMNDKGFVPCK 914



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 125/596 (20%), Positives = 228/596 (38%), Gaps = 79/596 (13%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D+ ++  +IS   +  G  E  R +  E+   G +    T+   +    +        E 
Sbjct: 237 DLITYTTIISTYCKQHG-LEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQEL 295

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGR--------------------------VDLGIK 175
             EM + G  PN  A   ++D LFK G                           VD   K
Sbjct: 296 LREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFK 355

Query: 176 VLKETQ-------------LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
             K  +             +PN +++   +   CK+ D+  V+ ++  M  K   PNV  
Sbjct: 356 SSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVIT 415

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF----------------- 265
           +  ++N + K G + EA  ++  M+      +   + +LIDG+                 
Sbjct: 416 YSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMK 475

Query: 266 ------------------RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
                             +R +R+D A  L + +   G   + V YTSL+ GF +A   S
Sbjct: 476 LSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKES 535

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A + ++ +  +    D+V +NVLI+ L + G Y +A  VY G++E+ L P+  T+  ++
Sbjct: 536 AALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKY-EAKSVYSGMIEMGLAPNQATYNIMI 594

Query: 368 STVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
              C  G      +L   +   ++    +  N L+    +AG   +A+ + N M   G  
Sbjct: 595 KAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIH 654

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           P+      LL     + K +  + +++ +V     +N   +  ++          KA  +
Sbjct: 655 PNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSV 714

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
            +  I + +  D V+Y   IRG  E    ++A   Y+QM +  V PN  TY ++L     
Sbjct: 715 LKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLG 774

Query: 545 ERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
              +     L   + +  +  D  T   L     K  +   ++    EM   G +P
Sbjct: 775 AGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVP 830



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 72/302 (23%), Positives = 122/302 (40%), Gaps = 25/302 (8%)

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL 382
           P L+  N LI   +  G      D+Y  +L   + P+ YT   L+   C  G   L   L
Sbjct: 8   PTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGNLILALDL 67

Query: 383 VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC--GA 440
           +  ++VE D V YN ++  FC+ G  NQA    + M+ K    D  +   L++G C  G 
Sbjct: 68  LRNVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVKGFCRIGL 127

Query: 441 RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSY 500
            K  E I     +V      +      ++D   +AG    A+ L  R   E    D+VSY
Sbjct: 128 AKYGERI--MDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSY 185

Query: 501 TVAIRGLLEGGRTEEAYILYSQMK---------------------HIAVPPNAYTYRVML 539
              I G  + G  ++A  L  ++                      ++ +  +  TY  ++
Sbjct: 186 NTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTII 245

Query: 540 LSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLI 599
            ++CK+  ++  + L +++I      D  T   +   + K    S A   L EM  +G+ 
Sbjct: 246 STYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVD 305

Query: 600 PD 601
           P+
Sbjct: 306 PN 307


>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
          Length = 792

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 125/517 (24%), Positives = 223/517 (43%), Gaps = 42/517 (8%)

Query: 92  VVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFT 151
           V T L         +  E+   GC   A+ + + +R   RG M+   +  FDEM   G  
Sbjct: 158 VTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAGVK 217

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
           P+               RV                 + I +  LCKL D      V+G M
Sbjct: 218 PDE--------------RV-----------------YAITISGLCKLRDADRALQVLGKM 246

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLG-LMITLGTSLSVNAWTVLIDGFRRLRR 270
              GF P    +  +++   K+ R+ EA +L   +++  G  + V   T+L+ G+     
Sbjct: 247 REAGFEPWELTYSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGE 306

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           +  A  L++++V +G +P  VTY  LIKG     M    +     +  +G  P     N+
Sbjct: 307 VGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNL 366

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKL---VPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE 387
           +I  L +   + DA+    GLL+L +   VPD +T+  L+  +C   +      L   ++
Sbjct: 367 VIKGLLRDKRWKDAI----GLLKLVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMK 422

Query: 388 ---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
              V+  +V Y++LL  +C+ G  ++A+KLY+ M DKGF P+  ++  L++G    +  D
Sbjct: 423 EAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFD 482

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
            A  +   +  N  +   + +  +++ L    R  +  ++ +R + E +    ++Y   I
Sbjct: 483 NAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSII 542

Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
            G ++ G    A+ +Y QM+   + PN  TY   +  +C+     +  +LL  V    I+
Sbjct: 543 NGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQ 602

Query: 565 LDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            D            K  + S A++ LV +   GL PD
Sbjct: 603 PDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPD 639



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 105/417 (25%), Positives = 181/417 (43%), Gaps = 10/417 (2%)

Query: 136 GMVLEAFD---EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK---ETQLPNFLSFN 189
           GM  E +    +M   G  P+T+  N+V+  L +  R    I +LK   +T +P+  ++ 
Sbjct: 340 GMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTGVPDVFTYG 399

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
             +  LCK   +    ++   M   G  P++  +  LL  +C+ GR+ EA +L   M   
Sbjct: 400 CLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDK 459

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           G   +   +T L+ G+ + +  D A  L  +M QNG S    TY  LI G          
Sbjct: 460 GFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEV 519

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
              L    SEG  P  + +N +I+   K G    A  +Y  + +  + P+  T+ S +  
Sbjct: 520 DEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDG 579

Query: 370 VCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
            C +    L  KL+  +    ++ D+  YNA +  FCK G  ++A+     +L  G TPD
Sbjct: 580 YCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPD 639

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
              +   + G    + + EA   Y  ++      +  ++T ++D   + G    A++L+ 
Sbjct: 640 VTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYS 699

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
             +      D  ++T    GL   G  + A  L   M+ + V PN  TY  ML++ C
Sbjct: 700 EMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYN-MLINAC 755



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 77/340 (22%), Positives = 157/340 (46%), Gaps = 7/340 (2%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR +    +  E+   G      T+   ++ Y + + +       +EM + G +   +  
Sbjct: 444 GRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTY 503

Query: 158 NIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           NI+++ L+ + RV    ++  + L E  +P  +++N  +    K   + +   +   M +
Sbjct: 504 NILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRK 563

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           KG  PN+  +   ++ +C+      A +LL  +   G    + A+   ID F +   +  
Sbjct: 564 KGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSR 623

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A +    ++++G +P+V  Y S + G+   KM + A  F   +  +    D   +  LID
Sbjct: 624 ALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLID 683

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCG---LEVEA 390
             SK+G+   AL++Y  ++   ++PD  TF +L   +C SG      +L+     L+V  
Sbjct: 684 GFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSP 743

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           ++V YN L++   + G   +A +L++ ML  G  PD+ ++
Sbjct: 744 NIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTY 783



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 95/404 (23%), Positives = 170/404 (42%), Gaps = 42/404 (10%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           +D+M   G  P+    + ++    + GR+D  +K+  E       PN +++   +    K
Sbjct: 418 WDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIK 477

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
                N   ++  M + G       + IL+N    + R+ E  ++L   ++ G   +   
Sbjct: 478 KKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMT 537

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  +I+GF +   +  A  ++ +M + G +PN+VTYTS I G+       +A   L  + 
Sbjct: 538 YNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVR 597

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS---TVCLSG 374
            +G  PD+  +N  ID   K G+   AL     LL+  L PD   + S ++    + +  
Sbjct: 598 RDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMA 657

Query: 375 RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
             S     +    V AD  +Y  L+  F K G    A++LY+ M+     PD+ +F  L 
Sbjct: 658 EASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALT 717

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            GLC +  ID A                        RL++           RR  V    
Sbjct: 718 HGLCRSGDIDGA-----------------------KRLLDD---------MRRLDVSP-- 743

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            ++V+Y + I   +  G+ +EA+ L+ +M    V P+  TY ++
Sbjct: 744 -NIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 96/421 (22%), Positives = 180/421 (42%), Gaps = 56/421 (13%)

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M  KG Y + +M+++++    + G   +A +L   M   G       + + I G  +LR 
Sbjct: 176 MRGKGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRD 235

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD-MLESEGHAPDLVFHN 329
            D A  +  KM + G  P  +TY+S++   ++ +    A    D ML + G   D+V   
Sbjct: 236 ADRALQVLGKMREAGFEPWELTYSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLAT 295

Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE 389
           +L+      G    ALD++D ++   + P + T+  L+                 G + E
Sbjct: 296 MLMHGYCLNGEVGKALDLFDEVVSDGVTPTNVTYGVLIK----------------GCDAE 339

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
                           G  ++  KL   M+++G  P  Y F  +++GL   ++  +AI +
Sbjct: 340 ----------------GMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGL 383

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
            + +V++    +   +  ++  L +  + H+A+ L+ +         +V+Y   + G  E
Sbjct: 384 LK-LVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCE 442

Query: 510 GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL-DYH 568
            GR +EA  LYS+M     PPN  TY  ++  + K++       LL ++    +   DY 
Sbjct: 443 KGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYT 502

Query: 569 TSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSD----ETMTPVSLFDGF 624
            +I +             VN++ E+       DEM ++   LS+     TMT  S+ +GF
Sbjct: 503 YNILINGLYM--------VNRVCEV-------DEMLKR--FLSEGFVPTTMTYNSIINGF 545

Query: 625 V 625
           V
Sbjct: 546 V 546



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/257 (21%), Positives = 99/257 (38%), Gaps = 39/257 (15%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG 173
           G V    T+   +  + +  M G     + +M + G TPN       +D   +    DL 
Sbjct: 530 GFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLA 589

Query: 174 IKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
           +K+L    ++   P+  ++N  +   CK  ++S     + ++++ G  P+V ++   +  
Sbjct: 590 VKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTG 649

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN----- 284
           +  +  +AEA +    MI          +T LIDGF ++  +  A  L+ +M+ N     
Sbjct: 650 YKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPD 709

Query: 285 ------------------------------GCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
                                           SPN+VTY  LI   +       AF   D
Sbjct: 710 DKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHD 769

Query: 315 MLESEGHAPDLVFHNVL 331
            + S G  PD   +++L
Sbjct: 770 EMLSSGVVPDDTTYDIL 786


>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
 gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
          Length = 382

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 157/325 (48%), Gaps = 11/325 (3%)

Query: 136 GMVLEAFDEMGRF----GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLS 187
           G V  AFD   +     G  PN F  N ++D L K  R+D    V+ E +     P+ ++
Sbjct: 60  GRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVT 119

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           +N  +  L +L  V         M  +G+ P +  F  ++   C+  R+A+A ++   MI
Sbjct: 120 YNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMI 179

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
                 ++  ++V+IDG  +  +LD A  L ++MV  GC P++V YT L+ GF  A    
Sbjct: 180 DRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLD 239

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A   L  + S+G  PD+V + V+ID L K+G  DDA +++  L+  K  P+  T+ +L+
Sbjct: 240 SALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALI 299

Query: 368 STVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
              C + R     K++  +    ++V YN ++          +A  ++  M + GF PD 
Sbjct: 300 GGYCRASRVDEGGKVMREMACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDA 359

Query: 428 YSFVGLLRGLCGARKIDEAINVYQG 452
            ++ GL R L   R ID   +V  G
Sbjct: 360 RTYRGLKRAL---RMIDHPPHVLTG 381



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 165/331 (49%), Gaps = 8/331 (2%)

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG-TSLSVNAWTVLIDGFRRLRRLD 272
           +G   N R   I+L   C+ GR+A+A +     + L      V ++T LI+G  +L R+D
Sbjct: 4   EGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVD 63

Query: 273 MAGYLWEKMV-QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
            A  L+ KMV   GC PN  TY +L+ G  +      A + +        APD+V +N L
Sbjct: 64  AAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTL 123

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EV 388
           +  L ++G  D+AL  +  + E   VP   +F ++++ +C + R +   ++   +   + 
Sbjct: 124 MAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDF 183

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
             +LV Y+ ++   CK+   ++A +L + M+ +G  PD  ++  L+ G   A ++D A+ 
Sbjct: 184 HPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALG 243

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           + + +V      +   +T ++D+L + GR   A ++FR  +  K   +VV+Y+  I G  
Sbjct: 244 LLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYC 303

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
              R +E   +   M+ +A  PN  TY  M+
Sbjct: 304 RASRVDEGGKV---MREMACRPNVVTYNTMI 331



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/305 (25%), Positives = 136/305 (44%), Gaps = 36/305 (11%)

Query: 60  CPSD-LIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIK 118
           C  D L A    I  A++RD+  DV +++ +++ + +L GR +       ++   G V  
Sbjct: 93  CKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQL-GRVDEALATFTQMTEEGYVPT 151

Query: 119 AQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK 178
             +F   +    R       LE F+EM    F PN    ++V+D                
Sbjct: 152 LVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVID---------------- 195

Query: 179 ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAE 238
                           LCK + +   + ++  MV +G  P++  +  L+  F   GR+  
Sbjct: 196 ---------------GLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDS 240

Query: 239 AYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIK 298
           A  LL  M++ G    V  +TV+ID   ++ R+D A  ++ ++V N CSPNVVTY++LI 
Sbjct: 241 ALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIG 300

Query: 299 GFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP 358
           G+  A         +  +      P++V +N +I  LS +   ++A  ++  + E   VP
Sbjct: 301 GYCRASRVDEGGKVMREMACR---PNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVP 357

Query: 359 DSYTF 363
           D+ T+
Sbjct: 358 DARTY 362


>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Vitis vinifera]
          Length = 725

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 120/527 (22%), Positives = 224/527 (42%), Gaps = 51/527 (9%)

Query: 65  IALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLL 124
           + + FF W  K+R++ HD  ++  +I  +    G    +   + E+ R  CVI       
Sbjct: 106 VKIQFFKWAGKRRNFEHDSTTYMALIHCLDE-AGMLGEMWKTIQEMVRSTCVIGPADLSE 164

Query: 125 FLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE----- 179
            +++  + +M    L  F ++      P +   N ++ +L + G  +   ++  E     
Sbjct: 165 IVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEG 224

Query: 180 TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEA 239
             LP+ ++++  +    KL    +   +   M   G +P  +++  +L  + K+GR+ +A
Sbjct: 225 DCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKA 284

Query: 240 YQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGC------------- 286
             L+  M   G +L+V  +T LI G  +  +++ A  ++  M++ GC             
Sbjct: 285 LGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINL 344

Query: 287 ----------------------SPNVVTYTSLIKGFMEAKM-FSIAFSFLDMLESEGHAP 323
                                 +PNVVTY ++IK   E+K   S AF + + ++  G  P
Sbjct: 345 LGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVP 404

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV 383
               +++LID   K    + AL + + + E    P    +CSL++ +  + R+    +L 
Sbjct: 405 SSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELF 464

Query: 384 ------CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
                 CG    +   VY  ++ +  K G  ++AV L+N M   G  PD Y++  L+ G+
Sbjct: 465 QELRENCGY---SSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGM 521

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
                 DEA ++ + +  N    + + H  I++     G    AI++F R    K   DV
Sbjct: 522 VRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDV 581

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
           VSY   +  L   G  EEA  L  +M       +  TY  +L +  K
Sbjct: 582 VSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSILEAVGK 628



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 92/391 (23%), Positives = 158/391 (40%), Gaps = 81/391 (20%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFD---EMGRFGFTPNT 154
           GR E   G+V E+   GC +   T+   ++   +    G V EA+     M + G  P+ 
Sbjct: 279 GRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKA---GKVEEAYSIFMNMLKEGCKPDV 335

Query: 155 FARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLN-DVSNVKDVIG 209
              N ++++L K GR+   IK+ +E +     PN +++N  +  L +     S       
Sbjct: 336 VLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYE 395

Query: 210 MMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLR 269
            M   G  P+   + IL++ FCK  R+ +A  LL  M   G +    A+  LI+   + +
Sbjct: 396 KMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAK 455

Query: 270 RLDMAGYLWEKMVQN-----------------------------------GCSPNVVTYT 294
           R + A  L++++ +N                                   GC+P+V  Y 
Sbjct: 456 RYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYN 515

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
           +L+ G +   M   A S L  +E  G  PDL  HN++++  ++ G    A++++  +   
Sbjct: 516 ALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNS 575

Query: 355 KLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKL 414
           K+ PD                                +V YN +L    +AG   +A KL
Sbjct: 576 KIKPD--------------------------------VVSYNTVLGCLSRAGMFEEAAKL 603

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
              M  KGF  D  ++  +L  +    KIDE
Sbjct: 604 MKEMNSKGFEYDLITYSSILEAVG---KIDE 631



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 46/214 (21%), Positives = 90/214 (42%), Gaps = 1/214 (0%)

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
           E D   Y AL+    +AG   +  K    M+             +++ L  A+ +++A++
Sbjct: 121 EHDSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALS 180

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL-DVVSYTVAIRGL 507
           ++  I        ++ + +++  L++ G   K  +L+     E   L D V+Y+  I   
Sbjct: 181 IFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAF 240

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
            + GR + A  L+ +MK   + P A  Y  +L  + K   ++    L+Q++ +    L  
Sbjct: 241 GKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTV 300

Query: 568 HTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           +T   L K + K      A +  + M   G  PD
Sbjct: 301 YTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPD 334


>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/397 (24%), Positives = 189/397 (47%), Gaps = 11/397 (2%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDV 207
           P+ FA N V+    K+ R++   +VL   +    LP+ +++NI + +LC    +     V
Sbjct: 135 PDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKV 194

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
           +  ++     P V  + IL+      G I EA +LL  M+  G    +  +  +I G  +
Sbjct: 195 LDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCK 254

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
              ++ A  L   +   GC P+V++Y  L++ F+    +      +  + S G  P+ V 
Sbjct: 255 EGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVT 314

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE 387
           +++LI  L + G  D+A+ V   ++E +L PD+Y++  L+S +C  GR  L   ++  + 
Sbjct: 315 YSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMI 374

Query: 388 VEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL--CGARK 442
                 D+V YN +L+  CK G  NQA++++N +   G  P+  S+  ++  L  CG R 
Sbjct: 375 SNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRS 434

Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTV 502
              A+ +   ++      +   + +++  L   G   +AI L        +   V+SY +
Sbjct: 435 --RALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNI 492

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
            + GL +  R ++A  ++++M      PN  TY +++
Sbjct: 493 VLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLI 529



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/436 (22%), Positives = 197/436 (45%), Gaps = 8/436 (1%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLG---IKVLKETQLPNFLSFNIALCNLCKLNDVSNVK 205
           G+TP+      ++   F    ++     +++L+    P+  ++N  +   CK+N +    
Sbjct: 98  GYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHTEPDVFAYNAVISGFCKVNRIEAAT 157

Query: 206 DVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF 265
            V+  M  +GF P++  + I++   C   ++  A ++L  ++      +V  +T+LI+  
Sbjct: 158 QVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEAT 217

Query: 266 RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL 325
                ++ A  L E+M+  G  P++ TY ++I+G  +  M   A   +  L S+G  PD+
Sbjct: 218 IVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDV 277

Query: 326 VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPK 381
           + +N+L+      G +D+   +   +      P+  T+  L+S++C  GR     S+L K
Sbjct: 278 ISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVL-K 336

Query: 382 LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
           ++   E+  D   Y+ L+S  CK G  + A+ + + M+  G  PD  ++  +L  LC   
Sbjct: 337 VMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNG 396

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYT 501
             ++A+ ++  +       N   +  ++  L   G   +A+ +    I +    D ++Y 
Sbjct: 397 NANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYN 456

Query: 502 VAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
             I  L   G  EEA  L   M+     P   +Y ++LL  CK R I     +  ++I+ 
Sbjct: 457 SLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEK 516

Query: 562 RIELDYHTSIRLTKFI 577
               +  T I L + I
Sbjct: 517 GCRPNETTYILLIEGI 532



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 98/423 (23%), Positives = 202/423 (47%), Gaps = 14/423 (3%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV +++ +IS   ++  R E    ++  +   G +    T+ + +         G+ L+ 
Sbjct: 136 DVFAYNAVISGFCKVN-RIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKV 194

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
            D++      P      I+++     G ++  +K+L+E      LP+  ++N  +  +CK
Sbjct: 195 LDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCK 254

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              V    ++I  +  KG  P+V  + ILL  F   G+  E  +L+  M + G   +   
Sbjct: 255 EGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVT 314

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +++LI    R  R+D A  + + M++   +P+  +Y  LI    +     +A   +D + 
Sbjct: 315 YSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMI 374

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
           S G  PD+V +N ++  L K G+ + AL++++ L  +   P+  ++ +++S +   G  S
Sbjct: 375 SNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRS 434

Query: 378 ----LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
               ++P ++    V+ D + YN+L+S  C+ G   +A+ L + M   GF P   S+  +
Sbjct: 435 RALGMVPAMI-SKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIV 493

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ----LFRRAI 489
           L GLC  R+ID+AI ++  ++      N   +  +++ +  AG   +A++    LF R +
Sbjct: 494 LLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDV 553

Query: 490 VEK 492
           + +
Sbjct: 554 ISQ 556



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 89/368 (24%), Positives = 180/368 (48%), Gaps = 9/368 (2%)

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           +V KG+ P+V +   L+  F     I +A +++ ++ +  T   V A+  +I GF ++ R
Sbjct: 94  LVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILES-HTEPDVFAYNAVISGFCKVNR 152

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           ++ A  +  +M   G  P++VTY  +I      +   +A   LD L  +   P ++ + +
Sbjct: 153 IEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTI 212

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA 390
           LI+     G  ++A+ + + +L   L+PD YT+ +++  +C  G      +L+  L  + 
Sbjct: 213 LIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKG 272

Query: 391 ---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
              D++ YN LL  F   G  ++  KL   M  +G  P+  ++  L+  LC   +IDEAI
Sbjct: 273 CKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAI 332

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
           +V + ++      + + +  ++  L + GR   AI +    I      D+V+Y   +  L
Sbjct: 333 SVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAAL 392

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF--CKERN--IKMVKRLLQDVIDARI 563
            + G   +A  ++++++ +  PPN  +Y  M+ +   C +R+  + MV  ++   +D   
Sbjct: 393 CKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPD- 451

Query: 564 ELDYHTSI 571
           E+ Y++ I
Sbjct: 452 EITYNSLI 459



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 65/300 (21%), Positives = 125/300 (41%), Gaps = 33/300 (11%)

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           +A  F+ +  FL+ L ++G+ PD++    LI                 G    K +  + 
Sbjct: 80  KAGKFNESLYFLECLVNKGYTPDVILCTKLIK----------------GFFNFKNIEKAS 123

Query: 362 TFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
               +L +                   E D+  YNA++S FCK      A ++ N M  +
Sbjct: 124 RVMEILES-----------------HTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKAR 166

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
           GF PD  ++  ++  LC  RK+  A+ V   ++++N       +T +++  I  G  ++A
Sbjct: 167 GFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEA 226

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
           ++L    +      D+ +Y   IRG+ + G  E A  L + +      P+  +Y ++L +
Sbjct: 227 MKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRA 286

Query: 542 FCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           F  +      ++L+ ++     E +  T   L   + +F     A++ L  M    L PD
Sbjct: 287 FLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPD 346


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 103/420 (24%), Positives = 191/420 (45%), Gaps = 36/420 (8%)

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKL 198
           D M   G  P+     +V++ L K G  DL   +L + +     P  L +N  +  LCK 
Sbjct: 5   DRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKY 64

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
             + +  ++   M  KG  PNV  +  L++C C  GR ++A +LL  MI    +  V  +
Sbjct: 65  KHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTF 124

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
           + LID F +  +L  A  L+++MV+    P++VTY+SLI GF        A    + + S
Sbjct: 125 SALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS 184

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL 378
           +   PD+V +N LI    K    ++ ++V+  + +  LV ++                  
Sbjct: 185 KHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT------------------ 226

Query: 379 LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
                         V YN L+    +AG  + A +++  M+  G  P+  ++  LL GLC
Sbjct: 227 --------------VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 272

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
              K+++A+ V++ +  +      + +  +++ + +AG+      LF    ++    DVV
Sbjct: 273 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVV 332

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           +Y   I G    G  EEA  L+ +MK     PN+  Y  ++ +  ++ + +    L++++
Sbjct: 333 AYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 392



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 75/311 (24%), Positives = 158/311 (50%), Gaps = 3/311 (0%)

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           L+  M+  G    +  + V+++G  +    D+A  L  KM Q    P V+ Y ++I G  
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           + K    A +    +E++G  P++V ++ LI CL   G + DA  +   ++E K+ PD +
Sbjct: 63  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122

Query: 362 TFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           TF +L+      G+     KL   +    ++  +V Y++L++ FC     ++A +++  M
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
           + K   PD  ++  L++G C  ++++E + V++ +       N   +  ++  L +AG C
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 242

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
             A ++F+  + +  P ++++Y   + GL + G+ E+A +++  ++   + P  YTY +M
Sbjct: 243 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 302

Query: 539 LLSFCKERNIK 549
           +   CK   ++
Sbjct: 303 IEGMCKAGKVE 313



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 172/356 (48%), Gaps = 5/356 (1%)

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
           +I  MV KG  P++  + +++N  CK G    A+ LL  M        V  +  +IDG  
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL-DMLESEGHAPDL 325
           + + +D A  L+++M   G  PNVVTY+SLI        +S A   L DM+E + + PD+
Sbjct: 63  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN-PDV 121

Query: 326 VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL--- 382
              + LID   K G   +A  +YD +++  + P   T+ SL++  C+  R     ++   
Sbjct: 122 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 181

Query: 383 VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
           +       D+V YN L+  FCK     + ++++  M  +G   +  ++  L++GL  A  
Sbjct: 182 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 241

Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTV 502
            D A  +++ +V +    N   +  ++D L + G+  KA+ +F      K    + +Y +
Sbjct: 242 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 301

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
            I G+ + G+ E+ + L+  +    V P+   Y  M+  FC++ + +    L +++
Sbjct: 302 MIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 357



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/329 (25%), Positives = 162/329 (49%), Gaps = 21/329 (6%)

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           L ++MV  GC P++VTY  ++ G  +     +AF+ L+ +E     P ++ +N +ID L 
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLV 393
           K    DDAL+++  +    + P+  T+ SL+S +C  GR+S   +L+  +   ++  D+ 
Sbjct: 63  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            ++AL+  F K G   +A KLY+ M+ +   P   ++  L+ G C   ++DEA  +++ +
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
           V  +   +   +  ++    +  R  + +++FR         + V+Y + I+GL + G  
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 242

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
           + A  ++ +M    VPPN  TY  +L   CK  N K+ K        A +  +Y    ++
Sbjct: 243 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK--NGKLEK--------AMVVFEYLQRSKM 292

Query: 574 TKFIFKFHSSSSAVNQLVE-MCNLGLIPD 601
              I+ +       N ++E MC  G + D
Sbjct: 293 EPTIYTY-------NIMIEGMCKAGKVED 314



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 88/384 (22%), Positives = 179/384 (46%), Gaps = 8/384 (2%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
            ++M +    P     N ++D L K   +D  + + KE +     PN ++++  +  LC 
Sbjct: 39  LNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCN 98

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
               S+   ++  M+ +   P+V  F  L++ F K G++ EA +L   M+      S+  
Sbjct: 99  YGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVT 158

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           ++ LI+GF    RLD A  ++E MV   C P+VVTY +LIKGF + K           + 
Sbjct: 159 YSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMS 218

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G   + V +N+LI  L + G  D A +++  ++   + P+  T+ +LL  +C +G+  
Sbjct: 219 QRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLE 278

Query: 378 ---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
              ++ + +   ++E  +  YN ++   CKAG       L+  +  KG  PD  ++  ++
Sbjct: 279 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMI 338

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            G C     +EA  +++ +  +    N+  +  ++   +  G    + +L +      + 
Sbjct: 339 SGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFA 398

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYI 518
            D  +  + +  +L  GR +++++
Sbjct: 399 GDASTIGL-VTNMLHDGRLDKSFL 421


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 112/417 (26%), Positives = 188/417 (45%), Gaps = 10/417 (2%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCK 197
           F +M   G  P     N  M  L K GR     ++ +    +  +P+ +S++I L     
Sbjct: 357 FRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYAT 416

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
               +++ ++   M  KG   N   F IL++   K G + EA  +   M   G    V  
Sbjct: 417 EGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVT 476

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF-MEAKMFSIAFSFLDML 316
           ++ LI  F R+ RL  A   + +M+  G  PN V Y SLI GF M   +        +M+
Sbjct: 477 YSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMM 536

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR- 375
                 P++VF + +I  L   G   DA DV++ ++ +   P   TF SL+   CL G+ 
Sbjct: 537 SKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKM 596

Query: 376 ---FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
              F +L  +V  + +E D+V YN L+S +CK+G  +  + L+  ML K   P   ++  
Sbjct: 597 EKAFGVLDAMV-SVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSI 655

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           +L GL  A +   A  ++  ++ +  AV+   +  ++  L       +AI LF +     
Sbjct: 656 VLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMD 715

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
              D+      I  L +  R EEA  L++ +    + PN  TY VM+ +  KE +++
Sbjct: 716 CKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVE 772



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 119/499 (23%), Positives = 211/499 (42%), Gaps = 47/499 (9%)

Query: 116 VIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR----VD 171
            I+A TFL  L    R +    VL     M   G  PN  + N V+  L    R    +D
Sbjct: 191 TIEANTFLKCLCHAKRTDEAVDVL--LHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALD 248

Query: 172 LGIKVLKETQL--PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
           +  ++ KE     P+ +SFN  +    K  +VS   ++I  MV+KG  P+V  +  +++ 
Sbjct: 249 MVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDA 308

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
            CK   + +A  +L  M+  G       +T +I G+        +  ++ KM   G  P 
Sbjct: 309 LCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPG 368

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV---------------------FH 328
           +VT+ S +    +      A      + ++GH PDLV                     FH
Sbjct: 369 IVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFH 428

Query: 329 --------------NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
                         N+LI   +K G  D+A+ V+  +    + PD  T+ +L+S  C  G
Sbjct: 429 SMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMG 488

Query: 375 RFS-LLPKL--VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT-PDNYSF 430
           R +  + K   +  + +E + VVY++L+  FC  G   +A +L + M+ KG   P+   F
Sbjct: 489 RLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFF 548

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             ++  LC   ++ +A +V+  ++            +++D     G+  KA  +    + 
Sbjct: 549 SSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVS 608

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
                DVV+Y   + G  + G+ ++  IL+ +M H  V P   TY ++L           
Sbjct: 609 VGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSA 668

Query: 551 VKRLLQDVIDARIELDYHT 569
            K++  ++ID+   +D  T
Sbjct: 669 AKKMFHEMIDSGTAVDIDT 687



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 83/387 (21%), Positives = 149/387 (38%), Gaps = 76/387 (19%)

Query: 253 LSVNAWTVLIDGFRRLRRLDM----------AG--------------------------Y 276
           LSV+ + +L+D   R RR D+          AG                           
Sbjct: 154 LSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDV 213

Query: 277 LWEKMVQNGCSPNVVTYTSLIK-------------------------------------G 299
           L  +M   GC PN ++Y ++IK                                     G
Sbjct: 214 LLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHG 273

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
           F +    S A + ++ +  +G  PD+V +N ++D L K  + D A  V   +++  + PD
Sbjct: 274 FFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPD 333

Query: 360 SYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYN 416
             T+ +++     SG +    K+   +  +     +V +N+ +S  CK G    A +++ 
Sbjct: 334 GLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQ 393

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
            M  KG  PD  S+  LL G     +  +  N++  +       N H    ++    + G
Sbjct: 394 YMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRG 453

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
              +A+ +F     +    DVV+Y+  I      GR  +A   +SQM  I + PN   Y 
Sbjct: 454 MMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYH 513

Query: 537 VMLLSFCKERNIKMVKRLLQDVIDARI 563
            ++  FC   ++   K L+ +++   I
Sbjct: 514 SLIHGFCMHGDLVKAKELVSEMMSKGI 540



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/390 (18%), Positives = 159/390 (40%), Gaps = 44/390 (11%)

Query: 104 RGIVGELARVGCVIKAQ-------TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           RG++ E   V   ++ Q       T+   +  + R       +E F +M   G  PNT  
Sbjct: 452 RGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVV 511

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQ-----LPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
            + ++      G +    +++ E        PN + F+  + +LC    V +  DV  ++
Sbjct: 512 YHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLV 571

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
           +  G  P +  F  L++ +C +G++ +A+ +L  M+++G    V  +  L+ G+ +  ++
Sbjct: 572 IHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKI 631

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           D    L+ +M+     P  VTY+ ++ G   A   S A      +   G A D+  + +L
Sbjct: 632 DDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKIL 691

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEAD 391
           +  L +    D+A+ ++  L                                  ++ + D
Sbjct: 692 LKGLCRNDLTDEAITLFHKL--------------------------------GAMDCKFD 719

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
           + + N +++   K     +A  L+  +   G  P+  ++  ++  L     ++EA  ++ 
Sbjct: 720 ITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFS 779

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
            +  +  A ++ +   I+  L++ G   KA
Sbjct: 780 SMEKSGCAPSSRLLNDIIRMLLQKGDIVKA 809



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/301 (23%), Positives = 124/301 (41%), Gaps = 28/301 (9%)

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLE----------------LKLVPDSYTFCSL 366
           P + F   +    +   S DDA  ++D LL                 L   PDS + CS 
Sbjct: 72  PQVAFVAAIARVRAGTFSTDDAHHLFDELLRQGTPVHNPALNGFLAALARAPDSVS-CSN 130

Query: 367 LSTVCLSGRFSLLPKLVCGLEVEA-DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
              + L+  F+ + +   G  V    +  Y  L+   C+A  P+     +  +L  G   
Sbjct: 131 GPALVLA-LFNRICREEAGPRVAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRT 189

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV-NAHVHTAIVDRLIEAGRCHKAIQL 484
                   L+ LC A++ DEA++V    + +   V NA  +  ++  L    R  +A+ +
Sbjct: 190 RTIEANTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDM 249

Query: 485 FRRAIVE--KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
            +R   E  +   DVVS+   I G  + G   +A  L ++M    V P+  TY  ++ + 
Sbjct: 250 VQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDAL 309

Query: 543 CKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSS---SAVNQLVEMCNLGLI 599
           CK R +   + +L+ ++D  +E D    +  T  I  +  S     +     +M + GLI
Sbjct: 310 CKARAMDKAELVLRQMVDKGVEPD---GLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLI 366

Query: 600 P 600
           P
Sbjct: 367 P 367



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/244 (21%), Positives = 87/244 (35%), Gaps = 31/244 (12%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           L G+ E   G++  +  VG      T+   +  Y +       L  F EM      P T 
Sbjct: 592 LVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTV 651

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG 215
             +IV+D LF  GR     K+  E                               M+  G
Sbjct: 652 TYSIVLDGLFHAGRTSAAKKMFHE-------------------------------MIDSG 680

Query: 216 FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAG 275
              ++  ++ILL   C+     EA  L   +  +     +     +I+   ++RR + A 
Sbjct: 681 TAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEAN 740

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
            L+  +  +G  PNV TY  +I   ++      A +    +E  G AP     N +I  L
Sbjct: 741 DLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRML 800

Query: 336 SKMG 339
            + G
Sbjct: 801 LQKG 804


>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
          Length = 748

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 114/523 (21%), Positives = 221/523 (42%), Gaps = 43/523 (8%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD----LGIKV 176
           T+ + +  Y R     + L  F  + R G  P+  + N ++D   K G VD    L  K+
Sbjct: 124 TYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKM 183

Query: 177 LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
           ++++  P+ +++N  +  LCK  ++   + V+  MV  G  PN + +  L+  +   G  
Sbjct: 184 IEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMW 243

Query: 237 AEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSL 296
            E+ ++   M + G    V      I    R  R+  A  +++ MV  G  PN+++Y++L
Sbjct: 244 KESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTL 303

Query: 297 IKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
           + G+     F+   S ++++ S+G  P+  F N+LI+  ++ G  D A+ +++ +    +
Sbjct: 304 LHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGM 363

Query: 357 VPDSYTFCSLLSTVCLSGRFS-------------LLPK------LVCGLEVEADLVVYNA 397
           +PD+ TF +++S++C  GR               + P       L+ G     +LV    
Sbjct: 364 IPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKE 423

Query: 398 LLSYFCKAGFPNQAVKLYNT--------------------MLDKGFTPDNYSFVGLLRGL 437
           L+S       P   VK +++                    M+  G  P+  +F  L+ G 
Sbjct: 424 LISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGY 483

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
           C    ++EA  +   +       N +++  +VD   + GR   A+ +FR  + +      
Sbjct: 484 CLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTS 543

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
           V Y + + GL +  RT  A  ++ +M       +  TY V+L   C+         LL+ 
Sbjct: 544 VLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEK 603

Query: 558 VIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           +    ++ D  T   +   + K      A      +   GL+P
Sbjct: 604 LFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVP 646



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 114/518 (22%), Positives = 222/518 (42%), Gaps = 11/518 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV +++ +I  + +     ++ R ++ ++   G     +T+   +  Y    M+   +  
Sbjct: 191 DVVTYNSLIDGLCKTKEMVKSER-VLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRV 249

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
           F EM   G  P     N  +  L +  R+     +     L    PN +S++  L     
Sbjct: 250 FKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAA 309

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
               +N+  ++ +MV KG  PN R F IL+N + + G + +A  +   M   G       
Sbjct: 310 EGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVT 369

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL-DML 316
           +  +I    R+ RLD A + +  MV  G  P+   Y  LI+G         A   + +M+
Sbjct: 370 FATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMM 429

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR- 375
             +   P + + + +I+ L K G   +  D+ D +++    P+  TF SL+   CL G  
Sbjct: 430 NKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNM 489

Query: 376 ---FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
              F+LL  +   + +E +  +Y  L+  +CK G  + A+ ++  ML KG  P +  +  
Sbjct: 490 EEAFALLDAMA-SIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNI 548

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           +L GL  AR+   A  ++  ++ +   V+   +  ++  L       +A  L  +     
Sbjct: 549 ILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMN 608

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVK 552
              D++++ + I  +L+ GR +EA  L++ +    + P  +TY +M+ +  KE + +   
Sbjct: 609 VKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEAD 668

Query: 553 RLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQL 590
            L   V  +    D      + + + K    + A N L
Sbjct: 669 NLFISVEKSGRAPDSRLLNHIVRMLLKKAEVAKASNYL 706



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 92/417 (22%), Positives = 169/417 (40%), Gaps = 76/417 (18%)

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
           P +  + IL++C+ +M R   A  + G ++  G    V ++  LIDGF +   +D A  L
Sbjct: 120 PTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYEL 179

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAK--------------------------------- 304
           + KM++   SP+VVTY SLI G  + K                                 
Sbjct: 180 FYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYST 239

Query: 305 --MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
             M+  +      + S G  P +V  N  I  L +     +A D++D ++     P+  +
Sbjct: 240 AGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIIS 299

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGLEVEADLV----VYNALLSYFCKAGFPNQAVKLYNTM 418
           + +LL      G F+ +  LV  L V   +V     +N L++ + + G  ++A+ ++  M
Sbjct: 300 YSTLLHGYAAEGCFANMNSLV-NLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDM 358

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV------------------------ 454
            +KG  PD  +F  ++  LC   ++D+A++ +  +V                        
Sbjct: 359 QNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGEL 418

Query: 455 ----------MNN--PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTV 502
                     MN   P       ++I++ L + GR  +   +    +      +VV++  
Sbjct: 419 VKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNS 478

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
            + G    G  EEA+ L   M  I + PN Y Y  ++  +CK   I     + +D++
Sbjct: 479 LMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDML 535



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 111/481 (23%), Positives = 201/481 (41%), Gaps = 53/481 (11%)

Query: 57  LLNCPSDLIALSFFIWCAKQRDYFHDV---QSFDHMISVVTRLTGR-----FETVRGIVG 108
           ++NC S + AL       + +D F  +       ++IS  T L G      F  +  +V 
Sbjct: 262 VVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVN 321

Query: 109 ELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIG 168
            +   G V   + F + +  Y R  M    +  F++M   G  P+T     V+  L +IG
Sbjct: 322 LMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIG 381

Query: 169 R-----------VDLGI------------------KVLKETQL-----------PNFLSF 188
           R           VD+G+                  +++K  +L           P    F
Sbjct: 382 RLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYF 441

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           +  + NL K   V+  KD++ +MV+ G  PNV  F  L+  +C +G + EA+ LL  M +
Sbjct: 442 SSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMAS 501

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
           +G   +   +  L+DG+ +  R+D A  ++  M+  G  P  V Y  ++ G  +A+  + 
Sbjct: 502 IGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTA 561

Query: 309 AFS-FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
           A   F +M+ES G    +  + V++  L +    D+A  + + L  + +  D  TF  ++
Sbjct: 562 AKKMFHEMIES-GTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVI 620

Query: 368 STVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
           S +   GR     +L   +        +  YN ++S   K     +A  L+ ++   G  
Sbjct: 621 SAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRA 680

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           PD+     ++R L    ++ +A N    I  NN  + A   + +       G+C + I+L
Sbjct: 681 PDSRLLNHIVRMLLKKAEVAKASNYLSIIDENNLTLEASTISLLASLFSREGKCREHIKL 740

Query: 485 F 485
            
Sbjct: 741 L 741



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 82/347 (23%), Positives = 145/347 (41%), Gaps = 49/347 (14%)

Query: 273 MAGYLWEKMVQNGC------SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
           +A  L+++M +  C      +P + TY  LI  +       +A +    L   G  PD+ 
Sbjct: 99  LAVELFKRMDRWACPHAAADAPTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVC 158

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF----SLLPKL 382
            +N LID  SK G  D A +++  ++E  + PD  T+ SL+  +C +        +L ++
Sbjct: 159 SYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQM 218

Query: 383 VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
           V    +  +   YN+L+  +  AG   ++V+++  M   G  P   +    +  LC   +
Sbjct: 219 V-DAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNR 277

Query: 443 IDEAINVYQGIVMNNPA-------------------------VNAHVHTAIVDR------ 471
           I EA +++  +V+  P                          VN  V   IV        
Sbjct: 278 IKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNI 337

Query: 472 LIEA-GRC---HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIA 527
           LI A  RC    KA+ +F     +    D V++   I  L   GR ++A   ++ M  I 
Sbjct: 338 LINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIG 397

Query: 528 VPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE---LDYHTSI 571
           VPP+   YR ++   C    +   K L+ ++++  I    + Y +SI
Sbjct: 398 VPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSI 444



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/290 (21%), Positives = 129/290 (44%), Gaps = 15/290 (5%)

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FS 377
           AP +  +N+LIDC  +M   + AL V+  LL   L PD  ++ +L+      G     + 
Sbjct: 119 APTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYE 178

Query: 378 LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
           L  K++    V  D+V YN+L+   CK     ++ ++   M+D G  P+N ++  L+ G 
Sbjct: 179 LFYKMI-EQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGY 237

Query: 438 CGARKIDEAINVYQGIVMNN--PAV---NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
             A    E++ V++ +  +   P V   N+ +H      L    R  +A  +F   +++ 
Sbjct: 238 STAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHA-----LCRHNRIKEAKDIFDSMVLKG 292

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVK 552
              +++SY+  + G    G       L + M    + PN   + +++ ++ +   +    
Sbjct: 293 PKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAM 352

Query: 553 RLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
            + +D+ +  +  D  T   +   + +      A+++   M ++G+ P E
Sbjct: 353 LIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSE 402


>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
          Length = 933

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 110/464 (23%), Positives = 202/464 (43%), Gaps = 39/464 (8%)

Query: 182 LP-NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAY 240
           LP + + +N  +   C+   V   + V+ MM   G  PNV  +   +  +C+   + EA+
Sbjct: 200 LPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAF 259

Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
            L   M+  G  L V   + L+ G  R  R   A  L+ +M + G +PN VTY +LI   
Sbjct: 260 DLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSL 319

Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
            +A       S L  + S G   DLV +  L+D L K G  D+  D     L   L P+ 
Sbjct: 320 AKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNG 379

Query: 361 YTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
            T+  L+  +C +       +++  +E   +  ++V ++++++ F K G  ++A +    
Sbjct: 380 VTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRM 439

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           M ++G  P+  ++  L+ G    +  D A+ VY  ++     VN  +  ++V+ L + G+
Sbjct: 440 MKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGK 499

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG--------------------------- 510
             +A+ LF+ A      LD V+YT  I GL +                            
Sbjct: 500 IEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNV 559

Query: 511 --------GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
                   G+ +EA    ++M+++ + P+  TY  M++S C++       +LL ++  + 
Sbjct: 560 FINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSS 619

Query: 563 IELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRK 606
           I+ +  T   L   +F   +   A   L EM + G  P  +  +
Sbjct: 620 IKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHR 663



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 126/561 (22%), Positives = 233/561 (41%), Gaps = 43/561 (7%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV +   +++ + R  GRF     +  E+ +VG      T+   +    +      +L  
Sbjct: 273 DVVTLSALVAGLCR-DGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSL 331

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCK 197
             EM   G   +      +MD L K G+ D     L+    +   PN +++ + +  LCK
Sbjct: 332 LGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCK 391

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            ++V   + V+  M  K   PNV  F  ++N F K G + +A +   +M   G + +V  
Sbjct: 392 AHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVT 451

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMV-------------------QN-------------- 284
           +  LIDGF + +  D A  ++  M+                   QN              
Sbjct: 452 YGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDAS 511

Query: 285 --GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
             G S + V YT+LI G  +A     AF F   L      PD V +NV I+CL  +G + 
Sbjct: 512 GSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFK 571

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALL 399
           +A      +  + L PD  T+ +++ + C  G  +   KL+  ++   ++ +L+ YN L+
Sbjct: 572 EAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLV 631

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
           +     G   +A  L N M+  GF+P + +   +L+    +R++D  +++++ ++     
Sbjct: 632 AGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLH 691

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            +  V+  ++  L   G   KA  +    +      D +++   I G  +    + A+  
Sbjct: 692 ADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFAT 751

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK 579
           Y+QM H  + PN  T+  +L        I     +L ++  + +E +  T   L     K
Sbjct: 752 YAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGK 811

Query: 580 FHSSSSAVNQLVEMCNLGLIP 600
             +   A+    EM   G +P
Sbjct: 812 QSNKVEAMRLYCEMVGKGFVP 832



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 91/374 (24%), Positives = 170/374 (45%), Gaps = 8/374 (2%)

Query: 174 IKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKM 233
           I +L+ ++ P  +++NI L     L+D ++   V+  M ++G   +      LL   C+ 
Sbjct: 93  IALLRSSR-PTTVAYNILLA---ALSDHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRN 148

Query: 234 GRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTY 293
           G++  A  L      +  +L V  W  LI G+ R+     A  + ++M   G   +VV Y
Sbjct: 149 GQVDAAAALADRGGGI-HALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGY 207

Query: 294 TSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE 353
            +L+ GF  A     A   LDM++  G  P++  +   I    +    ++A D+Y+G++ 
Sbjct: 208 NTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVR 267

Query: 354 LKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQ 410
             ++ D  T  +L++ +C  GRFS    L   ++      + V Y  L+    KAG   +
Sbjct: 268 NGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKE 327

Query: 411 AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
            + L   M+ +G   D  ++  L+  L    K DE  +  +  + +N + N   +T ++D
Sbjct: 328 LLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLID 387

Query: 471 RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
            L +A    +A Q+      +    +VV+++  I G ++ G  ++A      MK   + P
Sbjct: 388 ALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINP 447

Query: 531 NAYTYRVMLLSFCK 544
           N  TY  ++  F K
Sbjct: 448 NVVTYGTLIDGFFK 461



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 93/430 (21%), Positives = 189/430 (43%), Gaps = 11/430 (2%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP----NFLSFNIALC 193
            LE + +M   G   N F  + +++ L + G+++  + + K+        + +++   + 
Sbjct: 468 ALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLID 527

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
            L K  D+         ++ +   P+  ++ + +NC C +G+  EA   L  M  +G   
Sbjct: 528 GLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKP 587

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
             + +  +I    R      A  L  +M  +   PN++TY +L+ G         A   L
Sbjct: 588 DQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLL 647

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           + + S G +P  + H  ++   S+    D  LD+++ ++   L  D   + +LL  +C  
Sbjct: 648 NEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYH 707

Query: 374 G---RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           G   + +++ + + G  +  D + +NAL+   CK+   + A   Y  ML +  +P+  +F
Sbjct: 708 GMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATF 767

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK--AIQLFRRA 488
             LL GL    +I EA  V   I M    +  +  T  +       + +K  A++L+   
Sbjct: 768 NTLLGGLESVGRIGEAGTVL--IEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEM 825

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
           + + +   V +Y   I    + G   +A  L+  M+   V P + TY +++  + + RN 
Sbjct: 826 VGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNG 885

Query: 549 KMVKRLLQDV 558
             VK+ L+D+
Sbjct: 886 TEVKKCLKDM 895



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 101/246 (41%), Gaps = 4/246 (1%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           TG  E  + ++ E+   G    + T    L+   +     ++L+  + M   G   +   
Sbjct: 637 TGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITV 696

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N ++ VL   G       VL+E       P+ ++FN  +   CK + + N       M+
Sbjct: 697 YNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQML 756

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
            +   PN+  F  LL     +GRI EA  +L  M   G   +   + +L  G  +     
Sbjct: 757 HQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKV 816

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A  L+ +MV  G  P V TY +LI  F +A M + A      ++  G  P    +++L+
Sbjct: 817 EAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILV 876

Query: 333 DCLSKM 338
              S++
Sbjct: 877 SGWSRI 882



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/212 (23%), Positives = 86/212 (40%), Gaps = 7/212 (3%)

Query: 135 YGMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLS 187
           +GM  +A    +EM   G  P+T   N ++    K   +D       ++L +   PN  +
Sbjct: 707 HGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIAT 766

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           FN  L  L  +  +     V+  M + G  PN   ++IL     K     EA +L   M+
Sbjct: 767 FNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMV 826

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
             G    V+ +  LI  F +   +  A  L++ M + G  P   TY  L+ G+   +  +
Sbjct: 827 GKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGT 886

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
                L  ++ +G +P     + +    SK G
Sbjct: 887 EVKKCLKDMKEKGFSPSKGTLSFICRAFSKPG 918



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 4/168 (2%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
           + +M     +PN    N ++  L  +GR+     VL E +     PN L+++I      K
Sbjct: 752 YAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGK 811

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            ++      +   MV KGF P V  +  L++ F K G + +A +L   M   G   +   
Sbjct: 812 QSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCT 871

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           + +L+ G+ R+R         + M + G SP+  T + + + F +  M
Sbjct: 872 YDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGM 919



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 95/251 (37%), Gaps = 18/251 (7%)

Query: 359 DSYTFCSLLSTVCLSGRFSLL-PKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
           D  +  +LL + C   R  LL P +          V YN LL+          A  +   
Sbjct: 72  DPASLNALLYSHC---RLRLLRPAIALLRSSRPTTVAYNILLAALSDHA---HAPAVLAE 125

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           M  +G   D  +   LL GLC   ++D A        + +     H    I    + AG 
Sbjct: 126 MCKRGVPFDGVTVNTLLAGLCRNGQVDAAA------ALADRGGGIHALDVIGWNTLIAGY 179

Query: 478 CH-----KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
           C       A+ +  R   +  P+DVV Y   + G    G+ + A  +   MK   V PN 
Sbjct: 180 CRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNV 239

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVE 592
            TY   ++ +C+ + ++    L + ++   + LD  T   L   + +    S A     E
Sbjct: 240 ATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFRE 299

Query: 593 MCNLGLIPDEM 603
           M  +G  P+ +
Sbjct: 300 MDKVGAAPNHV 310


>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 105/425 (24%), Positives = 198/425 (46%), Gaps = 13/425 (3%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLS-----FNIALCNLCKL 198
           EM   G + +    ++++D L K GR     K L    + + ++     ++  +C + K 
Sbjct: 302 EMDSLGVSLDNHTYSLLIDGLLK-GRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKE 360

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
             +   K +   M+  G  P  + +  L+  +C+   + + Y+LL  M      +S   +
Sbjct: 361 GVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTY 420

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
             ++ G      LD A  + ++M+ +GC PNVV YT+LIK F++   F  A   L  ++ 
Sbjct: 421 GTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKE 480

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL 378
           +G APD+  +N LI  LSK    D+A      ++E  L P+++T+ + +S    +  F+ 
Sbjct: 481 QGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFAS 540

Query: 379 LPKLV-----CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
             K V     CG  V  + V+   L++ +CK     +A   Y +M+D+G   D  ++  L
Sbjct: 541 ADKYVKEMRECG--VLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVL 598

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           + GL    K+D+A  +++ +     A +   +  +++   + G   KA  +F   + E  
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL 658

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
             +V+ Y + + G    G  E+A  L  +M    + PNA TY  ++  +CK  ++    R
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFR 718

Query: 554 LLQDV 558
           L  ++
Sbjct: 719 LFDEM 723



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 118/549 (21%), Positives = 231/549 (42%), Gaps = 62/549 (11%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           +G  +    IV E+   GC      +   ++ + +   +G  +    EM   G  P+ F 
Sbjct: 430 SGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFC 489

Query: 157 RNIVMDVLFKIGRVDLG----IKVLKETQLPNFLSF------------------------ 188
            N ++  L K  R+D      +++++    PN  ++                        
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR 549

Query: 189 ------NIALC-----NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIA 237
                 N  LC       CK   V         MV +G   + + + +L+N   K  ++ 
Sbjct: 550 ECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVD 609

Query: 238 EAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLI 297
           +A ++   M   G +  V ++ VLI+GF +L  +  A  ++++MV+ G +PNV+ Y  L+
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669

Query: 298 KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
            GF  +     A   LD +  +G  P+ V +  +ID   K G   +A  ++D +    LV
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729

Query: 358 PDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE-----ADLVVYNALLSYFCKAGFPNQAV 412
           PDS+ + +L+   C   R + + + +           +    +NAL+++  K G      
Sbjct: 730 PDSFVYTTLVDGCC---RLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKT 786

Query: 413 KLYNTMLDKGF----TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAI 468
           ++ N ++D  F     P++ ++  ++  LC    ++ A  ++  +   N       +T++
Sbjct: 787 EVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSL 846

Query: 469 VDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM-KHIA 527
           ++   + GR  +   +F  AI      D + Y+V I   L+ G T +A +L  QM    A
Sbjct: 847 LNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNA 906

Query: 528 VPP----NAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSS 583
           V      +  T R +L  F K   +++ ++++++++  +   D  T I L       + S
Sbjct: 907 VDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIEL------INES 960

Query: 584 SSAVNQLVE 592
             + NQ VE
Sbjct: 961 CISSNQRVE 969



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 156/682 (22%), Positives = 268/682 (39%), Gaps = 126/682 (18%)

Query: 42  QDFPIILAPHIVHSTL----LNCPSDLIALSFFIWCAKQR------DYFH-------DVQ 84
            +  I + P +V S L    ++ PS L  LSFF W   Q+      D F        +  
Sbjct: 54  SNLSIEINPEVVLSVLRSKRVDDPSKL--LSFFNWVDSQKVTEQKLDSFSFLALDLCNFG 111

Query: 85  SFDHMISVVTRLTGRFETVRGIVGELARVGC--VIKAQTFLLFLRIYWRGEMYGMVLEA- 141
           SF+  +SVV R+  R   V  +   + R     V K+   +LF  ++      G + EA 
Sbjct: 112 SFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAV 171

Query: 142 --FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFL----SFNIALCNL 195
             F         P      +++D L +  R+DL   V K     N +    ++++ +   
Sbjct: 172 FVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAH 231

Query: 196 CKLNDVSNVKDVI---------------------GMMVRKGFYPNVRMFEILLNCFCKMG 234
           C+  +V   KDV+                       M+ KG  P    +++L++  CK+ 
Sbjct: 232 CRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIK 291

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCS------- 287
           R+ +A  LL  M +LG SL  + +++LIDG  + R  D A  L  +MV +G +       
Sbjct: 292 RLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYD 351

Query: 288 ----------------------------PNVVTYTSLIKGF-------------MEAKMF 306
                                       P    Y SLI+G+             +E K  
Sbjct: 352 CCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKR 411

Query: 307 SI----------------------AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
           +I                      A++ +  + + G  P++V +  LI    +   + DA
Sbjct: 412 NIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDA 471

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF----SLLPKLV-CGLEVEADLVVYNALL 399
           + V   + E  + PD + + SL+  +  + R     S L ++V  GL+  A    Y A +
Sbjct: 472 MRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNA--FTYGAFI 529

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
           S + +A     A K    M + G  P+     GL+   C   K+ EA + Y+ +V     
Sbjct: 530 SGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGIL 589

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            +A  +T +++ L +  +   A ++FR    +    DV SY V I G  + G  ++A  +
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSI 649

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK 579
           + +M    + PN   Y ++L  FC+   I+  K LL ++    +  +  T   +     K
Sbjct: 650 FDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709

Query: 580 FHSSSSAVNQLVEMCNLGLIPD 601
               + A     EM   GL+PD
Sbjct: 710 SGDLAEAFRLFDEMKLKGLVPD 731



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 85/366 (23%), Positives = 142/366 (38%), Gaps = 39/366 (10%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV S+  +I+  ++L G  +    I  E+   G       + + L  + R        E 
Sbjct: 626 DVFSYGVLINGFSKL-GNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
            DEM   G  PN      ++D   K G +    ++  E +L    P+   +   +   C+
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT-----LGTS 252
           LNDV     + G   +KG   +   F  L+N   K G+     ++L  ++       G  
Sbjct: 745 LNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKP 803

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
             V  + ++ID   +   L+ A  L+ +M      P V+TYTSL+ G+ +    +  F  
Sbjct: 804 NDV-TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
            D   + G  PD + ++V+I+   K G    AL + D +     V D    C L  + C 
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDG---CKLSISTC- 918

Query: 373 SGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
                                   ALLS F K G    A K+   M+   + PD+ + + 
Sbjct: 919 -----------------------RALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIE 955

Query: 433 LLRGLC 438
           L+   C
Sbjct: 956 LINESC 961


>gi|224058846|ref|XP_002299640.1| predicted protein [Populus trichocarpa]
 gi|222846898|gb|EEE84445.1| predicted protein [Populus trichocarpa]
          Length = 609

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 128/524 (24%), Positives = 223/524 (42%), Gaps = 45/524 (8%)

Query: 65  IALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARV-GCVIKAQTFL 123
           + + FF W  K+R++ HD+ ++  +I  +    G F  +  ++ E+ R   CVI      
Sbjct: 77  VKIQFFKWAGKRRNFEHDLTTYMPLIRCLDD-CGLFGEMWKMIQEMVRSPTCVIGPADLS 135

Query: 124 LFLRIYWRGEMYGMVL-----------------------------------EAFDEMGRF 148
             ++I  + +M    L                                   E + EM   
Sbjct: 136 EVVKILGKAKMVNKALSVFYQIKSRKCKPTASTYNSMILMLMQEGHHEKIHELYHEMCNE 195

Query: 149 GFT-PNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDV 207
           G   P+T   ++++    K+GR D  I++  E +             L  +   S  +  
Sbjct: 196 GDCFPDTMTYSVLVSAFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTLLAIYFKSGDEKA 255

Query: 208 IGM---MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
           +G+   M  KG  P V  +  L+    K GR+ +AY +   M+  G    V     LI+ 
Sbjct: 256 LGLVQEMKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINI 315

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM-FSIAFSFLDMLESEGHAP 323
           F +  RL+ A  L+++M    C+PNVVTY ++IK   E+K   S A S+ + +++ G  P
Sbjct: 316 FGKAGRLEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTP 375

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV 383
               +++LID   K    + AL + + + E    P    +CSL++ +  + R+    +L 
Sbjct: 376 SSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELF 435

Query: 384 CGLEV---EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
             L+     +   +Y  ++    K G P++AV L+N M   G  PD Y++  L+ GL  A
Sbjct: 436 LELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRA 495

Query: 441 RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSY 500
             I+EA +  + +  N    + + H  I++ L   GR  +A ++F +        D VSY
Sbjct: 496 GMIEEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSY 555

Query: 501 TVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
              +  L   G  EEA  L  +M       +  TY  +L +  K
Sbjct: 556 NTILGSLSRSGMFEEAAKLMREMGSRGFEYDHITYSSILEAVGK 599



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 85/355 (23%), Positives = 146/355 (41%), Gaps = 39/355 (10%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           +GR E    +   + + GC          + I+ +       L+ FD+M      PN   
Sbjct: 284 SGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGKAGRLEDALKLFDQMRSLKCAPNVVT 343

Query: 157 RNIVMDVLFK----IGRVDLGIKVLKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
            N V+  LF+            + +K   + P+  +++I +   CK N V     ++  M
Sbjct: 344 YNTVIKALFESKAPASEAASWFEKMKANGVTPSSFTYSILIDGFCKTNRVEKALLLLEEM 403

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQL-LGLMITLGTSLSVNAWTVLIDGFRRLRR 270
             KGF P    +  L+N   K  R   A +L L L    G S S   + V+I    +  R
Sbjct: 404 DEKGFPPCPAAYCSLINALGKAKRYEAANELFLELKENCGRS-SARIYAVMIKNLGKCGR 462

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
              A  L+ +M + GC+P+V  Y +L+ G + A M   AFS L  +E  G  PDL  HN+
Sbjct: 463 PSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEAFSALRTMEENGCTPDLNSHNI 522

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA 390
           +++ L++ G  + A +++  + +  + PD+                              
Sbjct: 523 ILNGLARTGRPEQATEMFMKMKDSLIKPDA------------------------------ 552

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
             V YN +L    ++G   +A KL   M  +GF  D+ ++  +L  +    + DE
Sbjct: 553 --VSYNTILGSLSRSGMFEEAAKLMREMGSRGFEYDHITYSSILEAVGKVDEDDE 605



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 44/209 (21%), Positives = 92/209 (44%), Gaps = 3/209 (1%)

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFT-PDNYSFVGLLRGLCGARKIDEAINVYQG 452
            YN+++    + G   +  +LY+ M ++G   PD  ++  L+       + D AI ++  
Sbjct: 168 TYNSMILMLMQEGHHEKIHELYHEMCNEGDCFPDTMTYSVLVSAFVKLGRDDYAIRLFDE 227

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           +  N     A ++T ++    ++G   KA+ L +    +     V +YT  I+GL + GR
Sbjct: 228 MKANGLHPTAKIYTTLLAIYFKSGD-EKALGLVQEMKDKGCAPTVFTYTELIKGLGKSGR 286

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
            E+AY ++  M      P+      ++  F K   ++   +L   +   +   +  T   
Sbjct: 287 VEDAYSVFLNMLKDGCKPDVVLINNLINIFGKAGRLEDALKLFDQMRSLKCAPNVVTYNT 346

Query: 573 LTKFIFKFHS-SSSAVNQLVEMCNLGLIP 600
           + K +F+  + +S A +   +M   G+ P
Sbjct: 347 VIKALFESKAPASEAASWFEKMKANGVTP 375


>gi|449491568|ref|XP_004158939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 412

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 99/377 (26%), Positives = 178/377 (47%), Gaps = 21/377 (5%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+  + NI    LC LN VS     +  ++R+G+ P++  +  L+   C++ RI+ A   
Sbjct: 8   PDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVA--- 64

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
                            ++IDG  ++   D A  ++E+M   G  PNV++Y+SL+ GF  
Sbjct: 65  ---------------TCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCC 109

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
           A     +    + +  +G  P+LV  NVLID L K G   +A  + +  ++  ++ D  T
Sbjct: 110 AGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVT 169

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
           + SL+   C  G  S   KL   +     E + + Y  L++ +CK     +A+ LYN M 
Sbjct: 170 YNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMP 229

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
             G  P+  ++  LL GL    K+ +A  ++  +  +  +V++ ++   +D L + G   
Sbjct: 230 QVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLF 289

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
           +A++LF       + LD  SY+  I GL + G+ E A+  + Q+    + PN  T  +M+
Sbjct: 290 EAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMI 349

Query: 540 LSFCKERNIKMVKRLLQ 556
             FC+   +     L +
Sbjct: 350 HGFCRVEQVDKANILFE 366



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 99/410 (24%), Positives = 190/410 (46%), Gaps = 35/410 (8%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIK----VLKETQLPNFLSFN-------------IA 191
           G +P+ F  NI+ + L  + RV  G+     +L+   +P+ +++N             +A
Sbjct: 5   GLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVA 64

Query: 192 LC----NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
            C     LCK+      K++   M  +G  PNV  +  L++ FC  G++ E+ +L   M+
Sbjct: 65  TCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMV 124

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
             G   ++  + VLID   +  ++  A  L E  +Q G   ++VTY SLI GF +    S
Sbjct: 125 DQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLS 184

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A      + S+G   + + + +LI+   K+   ++A+++Y+ + ++   P+  T+ +LL
Sbjct: 185 SARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLL 244

Query: 368 STVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
           + +  +G+     KL   ++   +  D  +Y   L   CK G   +A++L+N +    F 
Sbjct: 245 TGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFK 304

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
            D  S+  L+ GLC A K++ A   ++ +       N      ++       +  KA  L
Sbjct: 305 LDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANIL 364

Query: 485 FRRAIVEKYPL-----DVVSYTVAIRGLLEGGRTEEA----YILYSQMKH 525
           F +  +EK        D+++Y   +RG  E  + EE     + ++ +M+H
Sbjct: 365 FEK--MEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMFKRMRH 412



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/320 (24%), Positives = 163/320 (50%), Gaps = 10/320 (3%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNL 195
           E F+EM   G  PN  + + ++      G+++   ++  E       PN + FN+ +  L
Sbjct: 83  EIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDIL 142

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
           CK   V   K ++ + +++G   ++  +  L++ FCK+G ++ A +L   M + G   + 
Sbjct: 143 CKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNE 202

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
            ++T+LI+G+ ++ +++ A  L+ +M Q G  PNV TY++L+ G ++      A     +
Sbjct: 203 ISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGV 262

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
           +++ G + D   + + +D L K G   +A+++++ L       D  ++  L+  +C +G+
Sbjct: 263 MKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGK 322

Query: 376 FSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLY---NTMLDKGFTPDNYS 429
             +  +    L  E    ++V  N ++  FC+    ++A  L+     M + G TPD  +
Sbjct: 323 VEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIIT 382

Query: 430 FVGLLRGLCGARKIDEAINV 449
           +  LLRG C + K++E +N+
Sbjct: 383 YNTLLRGFCESNKLEEVVNL 402



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/391 (22%), Positives = 162/391 (41%), Gaps = 58/391 (14%)

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           G  P++    IL NC C + R++E     GL    G                 LRR    
Sbjct: 5   GLSPDLFTLNILANCLCNLNRVSE-----GLAAMTGI----------------LRR---- 39

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
           GY+          P++VTY +LIKG       S+A                    ++ID 
Sbjct: 40  GYI----------PDIVTYNTLIKGLCRVHRISVATC------------------IIIDG 71

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEAD 391
           L K+G  D+A ++++ +    ++P+  ++ SL+   C +G+     +L   +    V+ +
Sbjct: 72  LCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPN 131

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
           LV +N L+   CK G   +A KL    + +G   D  ++  L+ G C    +  A  ++ 
Sbjct: 132 LVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSARKLFL 191

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR-AIVEKYPLDVVSYTVAIRGLLEG 510
            +       N   +T +++   +  +  +A+ L+     V K P +V +Y+  + GLL+ 
Sbjct: 192 SMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRP-NVKTYSTLLTGLLQT 250

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
           G+  +A  L+  MK   +  ++  Y + L   CK   +     L  ++     +LD+ + 
Sbjct: 251 GKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESY 310

Query: 571 IRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            RL   + K      A     ++   GL P+
Sbjct: 311 SRLIDGLCKAGKVEIAWEFFKQLSQEGLQPN 341



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/245 (22%), Positives = 113/245 (46%), Gaps = 8/245 (3%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
           QR    D+ +++ +I    ++ G   + R +   +   GC     ++ + +  Y +    
Sbjct: 160 QRGIILDLVTYNSLIDGFCKI-GDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKV 218

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIK---VLKETQLP-NFLSFNIA 191
              +  ++EM + G  PN    + ++  L + G+V    K   V+K + +  +   + I 
Sbjct: 219 EEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIF 278

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           L  LCK   +    ++   +    F  +   +  L++  CK G++  A++    +   G 
Sbjct: 279 LDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGL 338

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLW---EKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
             +V    ++I GF R+ ++D A  L+   EKM +NGC+P+++TY +L++GF E+     
Sbjct: 339 QPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEE 398

Query: 309 AFSFL 313
             + L
Sbjct: 399 VVNLL 403



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 91/213 (42%), Gaps = 18/213 (8%)

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           DL   N L +  C     ++ +     +L +G+ PD  ++  L++GLC   +I  A  + 
Sbjct: 9   DLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVATCI- 67

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
                            I+D L + G   +A ++F     +    +V+SY+  + G    
Sbjct: 68  -----------------IIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCA 110

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
           G+ EE+  L+++M    V PN   + V++   CKE  +   K+LL+  I   I LD  T 
Sbjct: 111 GKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTY 170

Query: 571 IRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
             L     K    SSA    + M + G   +E+
Sbjct: 171 NSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEI 203



 Score = 46.6 bits (109), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 77/167 (46%), Gaps = 16/167 (9%)

Query: 94  TRLTGRFETVRGIVGELARVGCVIKAQ-------TFLLFLRIYWRGEMYGMVLEAFDEMG 146
           T LTG  +T  G VG+  ++  V+KA         +++FL    +  +    +E F+E+ 
Sbjct: 242 TLLTGLLQT--GKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELK 299

Query: 147 RFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCKLNDVS 202
            + F  +  + + ++D L K G+V++  +  K    E   PN ++ NI +   C++  V 
Sbjct: 300 SYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVD 359

Query: 203 NVK---DVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
                 + +  M   G  P++  +  LL  FC+  ++ E   LL  M
Sbjct: 360 KANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKM 406


>gi|449463822|ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49730-like [Cucumis sativus]
          Length = 641

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 103/482 (21%), Positives = 213/482 (44%), Gaps = 40/482 (8%)

Query: 42  QDFPIILAPHIVHSTLLNC-PSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRF 100
           Q+  +I+   +    L  C  +  +   FF+W +KQ  Y H  + +  MI  + ++  +F
Sbjct: 99  QESGVIMRSGLPERVLSRCGDAGNLGYRFFVWASKQPGYRHSYEVYKAMIKTLGKMR-QF 157

Query: 101 ETVRGIVGELARVGC-VIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNI 159
             V  ++ E+ +    ++  + F++ +R +    M    +E  DEM ++G  P+ +    
Sbjct: 158 GAVWALIEEMRKENPYMLTPEVFIVLMRRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGC 217

Query: 160 VMDVLFKIGRVDLGIKVLKETQL---PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
           ++D L K G V     + ++ ++   PN   F   L   C+   +   K V+  +   GF
Sbjct: 218 LLDALCKNGSVKEAASLFEDMRVRFNPNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGF 277

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
            P++ ++  LL  + + G++ +A+ LL  M  +    +  ++T+LI  F +  ++D A  
Sbjct: 278 EPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMR 337

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           ++ +M  +GC  +VVTYT+LI GF +      A+  LD +  +GH P  + +  ++    
Sbjct: 338 IFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHE 397

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYN 396
           K    ++ +++ + + ++  VP                                DL +YN
Sbjct: 398 KKEELEECMELIEEMRKIGCVP--------------------------------DLNIYN 425

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            ++   CK G   +AV+L+  M   G  P   +++ ++ G      + EA + ++ +V  
Sbjct: 426 TMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEACDYFKEMVER 485

Query: 457 N--PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
               A        + + L+ A +   A  ++     +   L+V ++T+ I  L   G  +
Sbjct: 486 GLLSAPQYGTLKELTNALLRAEKLEMAKNMWSCMTTKGCELNVSAWTIWIHALFSNGHVK 545

Query: 515 EA 516
           EA
Sbjct: 546 EA 547



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 83/369 (22%), Positives = 151/369 (40%), Gaps = 9/369 (2%)

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVT---YTSLIKGFMEAKMF 306
           G   S   +  +I    ++R+      L E+M +   +P ++T   +  L++ F   +M 
Sbjct: 136 GYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKE--NPYMLTPEVFIVLMRRFASVRMV 193

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
             A   LD +   G  PD      L+D L K GS  +A  +++ +  ++  P+   F SL
Sbjct: 194 KKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDM-RVRFNPNLRHFTSL 252

Query: 367 LSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           L   C  G+      ++  ++    E D+VVYN LL  + +AG    A  L   M     
Sbjct: 253 LYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNC 312

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
            P+  SF  L++  C   K+DEA+ ++  +  +    +   +T ++    + G   KA +
Sbjct: 313 GPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYE 372

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           +    I + +    +SY   +    +    EE   L  +M+ I   P+   Y  M+   C
Sbjct: 373 ILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVC 432

Query: 544 KERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           K  ++K   RL  ++    +     T I +            A +   EM   GL+    
Sbjct: 433 KLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEACDYFKEMVERGLLSAPQ 492

Query: 604 WRKLGLLSD 612
           +  L  L++
Sbjct: 493 YGTLKELTN 501



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/355 (18%), Positives = 145/355 (40%), Gaps = 31/355 (8%)

Query: 33  SPKVCATTHQDFPIILAPHIVHSTLLNCPSDLIALSFFIWCA--------------KQRD 78
           S K  A+  +D  +   P++ H T L           + WC               K+  
Sbjct: 227 SVKEAASLFEDMRVRFNPNLRHFTSL----------LYGWCREGKIMEAKHVLVQIKEAG 276

Query: 79  YFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMV 138
           +  D+  +++++    +  G+      ++ E+ +V C   A +F + ++ + + E     
Sbjct: 277 FEPDIVVYNNLLGGYAQ-AGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEA 335

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCN 194
           +  F EM   G   +      ++    K G  D   ++L    ++   P+ LS+   +  
Sbjct: 336 MRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMA 395

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
             K  ++    ++I  M + G  P++ ++  ++   CK+G + EA +L G M   G +  
Sbjct: 396 HEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPG 455

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG--CSPNVVTYTSLIKGFMEAKMFSIAFSF 312
           ++ + +++ GF     L  A   +++MV+ G   +P   T   L    + A+   +A + 
Sbjct: 456 LDTYILMVHGFLSQGCLVEACDYFKEMVERGLLSAPQYGTLKELTNALLRAEKLEMAKNM 515

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
              + ++G   ++    + I  L   G   +A      +++  L+P   TF  L+
Sbjct: 516 WSCMTTKGCELNVSAWTIWIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLM 570


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 107/442 (24%), Positives = 199/442 (45%), Gaps = 36/442 (8%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
           F +M      P      +++  LF+ GR    I +  E +     PN  ++ + +  +CK
Sbjct: 62  FKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCK 121

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              +   + ++  MV KG  P+V  +  L++ +CK G +  A ++L LM +   + +   
Sbjct: 122 ETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERT 181

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  LI GF R + +  A  L  KM+++  +P+VVTY SLI G  +      A+  L+++ 
Sbjct: 182 YNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMN 241

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G  PD   ++V ID L K G  ++A  +++ L E                        
Sbjct: 242 ENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKG---------------------- 279

Query: 378 LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
                     ++A+ V+Y AL+  +CKAG  + A  L + ML +   P++ ++  L+ GL
Sbjct: 280 ----------IKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGL 329

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
           C  RK+ EA+ + + ++          +T ++  +++ G    A ++  + +   Y  DV
Sbjct: 330 CKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDV 389

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
             YT  I      G  +EA  + S M    V P+A TY +++ ++     +     +L+ 
Sbjct: 390 YIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKR 449

Query: 558 VIDARIELDYHTSIRLTKFIFK 579
           + D   +  +HT   L K + K
Sbjct: 450 MFDTGCDPSHHTYSCLIKHLLK 471



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 93/376 (24%), Positives = 177/376 (47%), Gaps = 3/376 (0%)

Query: 184 NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
           N +S+   +  LC++  V    ++   M     YP VR + ++++   + GR  EA  L 
Sbjct: 38  NEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLF 97

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
             M   G   +++ +TV+I+   +  +L+    + ++MV+ G  P+V TY +LI G+ + 
Sbjct: 98  SEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKE 157

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
            M   A   LD++ S    P+   +N LI    +  +   A+ +   +LE +L P   T+
Sbjct: 158 GMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTY 217

Query: 364 CSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
            SL+   C  G      +L+  +    V  D   Y+  +   CK G   +A  L+N++ +
Sbjct: 218 NSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKE 277

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
           KG   +   +  L+ G C A K+D+A ++   ++  +   N+  + A++D L +  +  +
Sbjct: 278 KGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQE 337

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
           A+ L    I +     V +YT+ I  +L+ G  + A+ +  QM      P+ Y Y   + 
Sbjct: 338 ALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIH 397

Query: 541 SFCKERNIKMVKRLLQ 556
           +FC   NIK  + ++ 
Sbjct: 398 AFCTRGNIKEAEDMMS 413



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 104/413 (25%), Positives = 190/413 (46%), Gaps = 13/413 (3%)

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
           NDV++   V  MM +KG   N   +  L++  C++GR+ E   +   M       +V  +
Sbjct: 18  NDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTY 77

Query: 259 TVLIDG-FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           TV++   F   RR++ A  L+ +M + GC PN+ TYT +I    +          LD + 
Sbjct: 78  TVIVHALFESGRRME-AINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMV 136

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-- 375
            +G  P +  +N LID   K G  + A ++ D +      P+  T+  L+   C      
Sbjct: 137 EKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVH 196

Query: 376 --FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
              +LL K++    +   +V YN+L+   CK G+ + A +L N M + G  PD +++   
Sbjct: 197 RAMALLSKML-ESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVF 255

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           +  LC   +I+EA  ++  +       N  ++TA++D   +AG+   A  L  R + E  
Sbjct: 256 IDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDC 315

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
             +  +Y   I GL +  + +EA +L   M    +     TY +++++  KE +     R
Sbjct: 316 LPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHR 375

Query: 554 LLQDVIDARIELDYHTSIRLTKFIFKFHSSSS---AVNQLVEMCNLGLIPDEM 603
           +L  ++ +  + D +     T FI  F +  +   A + +  M   G++PD +
Sbjct: 376 ILDQMVSSGYQPDVYI---YTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDAL 425



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 105/490 (21%), Positives = 212/490 (43%), Gaps = 16/490 (3%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           ++ D +  V+++  ++  +     R E +  +  E+   GC     T+ + +    +   
Sbjct: 66  REDDCYPTVRTYTVIVHALFESGRRMEAIN-LFSEMRERGCEPNIHTYTVMINAMCKETK 124

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNI 190
                   DEM   G  P+    N ++D   K G V+   ++L      +  PN  ++N 
Sbjct: 125 LEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNE 184

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +C  C+  +V     ++  M+     P+V  +  L++  CK+G +  AY+LL LM   G
Sbjct: 185 LICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENG 244

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
                  ++V ID   +  R++ A  L+  + + G   N V YT+LI G+ +A     A 
Sbjct: 245 VVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDAN 304

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
           S LD + +E   P+   +N LID L K     +AL + + +++  L     T+  L+  +
Sbjct: 305 SLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAM 364

Query: 371 CLSGRFS----LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
              G F     +L ++V     + D+ +Y A +  FC  G   +A  + + M ++G  PD
Sbjct: 365 LKEGDFDYAHRILDQMVSS-GYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPD 423

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
             ++  ++    G   ++ A +V + +       + H ++ ++  L++     K   +  
Sbjct: 424 ALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNV-- 481

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
            A+ +  P    +    +  ++   + E A  L+ +M      PN  TY  +++  CK  
Sbjct: 482 -ALCDSIPNVFFADVADVWKMM---KFETALELFEKMLEHGCSPNINTYAKLIIGLCKVG 537

Query: 547 NIKMVKRLLQ 556
            + + ++L  
Sbjct: 538 RLGVAQKLFD 547



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/388 (23%), Positives = 170/388 (43%), Gaps = 12/388 (3%)

Query: 226 LLNCFCKMGRIAEA---------YQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
           ++N +CK+G + EA         + +  +M   G   +  ++T LI G   + R+D    
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           +++KM ++ C P V TYT ++    E+     A +    +   G  P++  + V+I+ + 
Sbjct: 61  IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPK---LVCGLEVEADLV 393
           K    ++   + D ++E  LVP   T+ +L+   C  G      +   L+       +  
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNER 180

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            YN L+  FC+    ++A+ L + ML+   TP   ++  L+ G C    +D A  +   +
Sbjct: 181 TYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLM 240

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
             N    +   ++  +D L + GR  +A  LF     +    + V YT  I G  + G+ 
Sbjct: 241 NENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKM 300

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
           ++A  L  +M      PN+ TY  ++   CKER ++    L++ +I   ++    T   L
Sbjct: 301 DDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTIL 360

Query: 574 TKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
              + K      A   L +M + G  PD
Sbjct: 361 IVAMLKEGDFDYAHRILDQMVSSGYQPD 388



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 112/569 (19%), Positives = 230/569 (40%), Gaps = 77/569 (13%)

Query: 44  FPIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETV 103
           +P +    ++   L      + A++ F    ++R    ++ ++  MI+ + + T + E  
Sbjct: 71  YPTVRTYTVIVHALFESGRRMEAINLFSE-MRERGCEPNIHTYTVMINAMCKET-KLEEG 128

Query: 104 RGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDV 163
           R I+ E+   G V    T+   +  Y +  M     E  D M      PN    N ++  
Sbjct: 129 RRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICG 188

Query: 164 LFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN 219
             +   V   +    K+L+    P+ +++N  +   CK+  + +   ++ +M   G  P+
Sbjct: 189 FCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPD 248

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
              + + ++  CK GRI EA  L   +   G   +   +T LIDG+ +  ++D A  L +
Sbjct: 249 QWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLD 308

Query: 280 KMVQNGCSPNVVTYTSLIKGF------------MEAKM---------------------- 305
           +M+   C PN  TY +LI G             ME+ +                      
Sbjct: 309 RMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEG 368

Query: 306 -FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
            F  A   LD + S G+ PD+  +   I      G+  +A D+   + E  ++PD+ T+ 
Sbjct: 369 DFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYT 428

Query: 365 SLLSTV----CLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKA-------------GF 407
            ++        L+  F +L ++      +     Y+ L+ +  K                
Sbjct: 429 LVIDAYGGLGLLNPAFDVLKRMF-DTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSI 487

Query: 408 PN----------------QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
           PN                 A++L+  ML+ G +P+  ++  L+ GLC   ++  A  ++ 
Sbjct: 488 PNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFD 547

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV-SYTVAIRGLLEG 510
            +     + +  ++ ++++   E G    A++L   A++E   L ++ S  V   GL E 
Sbjct: 548 HMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLV-GAMMEHGHLPLLESLNVLFCGLYEE 606

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVML 539
           G  E+A +++S +       +   +++++
Sbjct: 607 GSKEKAKVVFSNLLQCGYNDDEVAWKILI 635



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 102/450 (22%), Positives = 189/450 (42%), Gaps = 50/450 (11%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR E    +   L   G       +   +  Y +           D M      PN+   
Sbjct: 263 GRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTY 322

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQLPNFL-----SFNIALCNLCKLNDVSNVKDVIGMMV 212
           N ++D L K  +V   + +L E+ +   L     ++ I +  + K  D      ++  MV
Sbjct: 323 NALIDGLCKERKVQEAL-LLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMV 381

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
             G+ P+V ++   ++ FC  G I EA  ++ +M   G       +T++ID +  L  L+
Sbjct: 382 SSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLN 441

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A  + ++M   GC P+  TY+ LIK  ++ ++ +  +  + + +S    P++ F +V  
Sbjct: 442 PAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEEL-TKKYKNVALCDS---IPNVFFADVAD 497

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VE 389
             + KM  ++ AL++++ +LE    P+  T+  L+  +C  GR  +  KL   +    V 
Sbjct: 498 --VWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVS 555

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
               +YN+LL+  C+ G    AV+L   M++ G  P                 + E++NV
Sbjct: 556 PSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLP-----------------LLESLNV 598

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
                             +   L E G   KA  +F   +   Y  D V++ + I GLL+
Sbjct: 599 ------------------LFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLK 640

Query: 510 GGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
            G ++    L   M+      +  TYR+++
Sbjct: 641 NGLSDGCSELLGVMEARGCQIHPQTYRMLI 670



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/382 (19%), Positives = 148/382 (38%), Gaps = 40/382 (10%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
            G+ +    ++  +    C+  + T+   +    +       L   + M + G       
Sbjct: 297 AGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPT 356

Query: 157 RNIVMDVLFKIGRVDLGIKVLKET----QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
             I++  + K G  D   ++L +       P+   +   +   C   ++   +D++ MM 
Sbjct: 357 YTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMF 416

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR----- 267
            +G  P+   + ++++ +  +G +  A+ +L  M   G   S + ++ LI    +     
Sbjct: 417 ERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTK 476

Query: 268 ------------------------LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
                                   + + + A  L+EKM+++GCSPN+ TY  LI G  + 
Sbjct: 477 KYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKV 536

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP--DSY 361
               +A    D +   G +P    +N L++C  ++G Y DA+ +   ++E   +P  +S 
Sbjct: 537 GRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESL 596

Query: 362 T--FCSLLSTVCLSGRFSLLPKLV-CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
              FC L           +   L+ CG     D V +  L+    K G  +   +L   M
Sbjct: 597 NVLFCGLYEEGSKEKAKVVFSNLLQCG--YNDDEVAWKILIDGLLKNGLSDGCSELLGVM 654

Query: 419 LDKGFTPDNYSFVGLLRGLCGA 440
             +G      ++  L+ GL G 
Sbjct: 655 EARGCQIHPQTYRMLIEGLDGT 676


>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
 gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 110/464 (23%), Positives = 202/464 (43%), Gaps = 39/464 (8%)

Query: 182 LP-NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAY 240
           LP + + +N  +   C+   V   + V+ MM   G  PNV  +   +  +C+   + EA+
Sbjct: 200 LPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAF 259

Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
            L   M+  G  L V   + L+ G  R  R   A  L+ +M + G +PN VTY +LI   
Sbjct: 260 DLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSL 319

Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
            +A       S L  + S G   DLV +  L+D L K G  D+  D     L   L P+ 
Sbjct: 320 AKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNG 379

Query: 361 YTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
            T+  L+  +C +       +++  +E   +  ++V ++++++ F K G  ++A +    
Sbjct: 380 VTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRM 439

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           M ++G  P+  ++  L+ G    +  D A+ VY  ++     VN  +  ++V+ L + G+
Sbjct: 440 MKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGK 499

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG--------------------------- 510
             +A+ LF+ A      LD V+YT  I GL +                            
Sbjct: 500 IEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNV 559

Query: 511 --------GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
                   G+ +EA    ++M+++ + P+  TY  M++S C++       +LL ++  + 
Sbjct: 560 FINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSS 619

Query: 563 IELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRK 606
           I+ +  T   L   +F   +   A   L EM + G  P  +  +
Sbjct: 620 IKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHR 663



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 126/561 (22%), Positives = 233/561 (41%), Gaps = 43/561 (7%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV +   +++ + R  GRF     +  E+ +VG      T+   +    +      +L  
Sbjct: 273 DVVTLSALVAGLCR-DGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSL 331

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCK 197
             EM   G   +      +MD L K G+ D     L+    +   PN +++ + +  LCK
Sbjct: 332 LGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCK 391

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            ++V   + V+  M  K   PNV  F  ++N F K G + +A +   +M   G + +V  
Sbjct: 392 AHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVT 451

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMV-------------------QN-------------- 284
           +  LIDGF + +  D A  ++  M+                   QN              
Sbjct: 452 YGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDAS 511

Query: 285 --GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
             G S + V YT+LI G  +A     AF F   L      PD V +NV I+CL  +G + 
Sbjct: 512 GSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFK 571

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALL 399
           +A      +  + L PD  T+ +++ + C  G  +   KL+  ++   ++ +L+ YN L+
Sbjct: 572 EAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLV 631

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
           +     G   +A  L N M+  GF+P + +   +L+    +R++D  +++++ ++     
Sbjct: 632 AGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLH 691

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            +  V+  ++  L   G   KA  +    +      D +++   I G  +    + A+  
Sbjct: 692 ADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFAT 751

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK 579
           Y+QM H  + PN  T+  +L        I     +L ++  + +E +  T   L     K
Sbjct: 752 YAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGK 811

Query: 580 FHSSSSAVNQLVEMCNLGLIP 600
             +   A+    EM   G +P
Sbjct: 812 QSNKVEAMRLYCEMVGKGFVP 832



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 91/375 (24%), Positives = 170/375 (45%), Gaps = 8/375 (2%)

Query: 173 GIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCK 232
            I +L+ ++ P  +++NI L     L+D ++   V+  M ++G   +      LL   C+
Sbjct: 92  AIALLRSSR-PTTVAYNILLA---ALSDHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCR 147

Query: 233 MGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVT 292
            G++  A  L      +  +L V  W  LI G+ R+     A  + ++M   G   +VV 
Sbjct: 148 NGQVDAAAALADRGGGI-HALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVG 206

Query: 293 YTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
           Y +L+ GF  A     A   LDM++  G  P++  +   I    +    ++A D+Y+G++
Sbjct: 207 YNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMV 266

Query: 353 ELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPN 409
              ++ D  T  +L++ +C  GRFS    L   ++      + V Y  L+    KAG   
Sbjct: 267 RNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGK 326

Query: 410 QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
           + + L   M+ +G   D  ++  L+  L    K DE  +  +  + +N + N   +T ++
Sbjct: 327 ELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLI 386

Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
           D L +A    +A Q+      +    +VV+++  I G ++ G  ++A      MK   + 
Sbjct: 387 DALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGIN 446

Query: 530 PNAYTYRVMLLSFCK 544
           PN  TY  ++  F K
Sbjct: 447 PNVVTYGTLIDGFFK 461



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/361 (21%), Positives = 145/361 (40%), Gaps = 45/361 (12%)

Query: 136 GMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSF 188
           G + EA   F +    G + +      ++D LFK G +      G +++    LP+ + +
Sbjct: 498 GKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVY 557

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           N+ +  LC L      K  +  M   G  P+   +  ++   C+ G  A+A +LL  M  
Sbjct: 558 NVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKM 617

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
                ++  +  L+ G      ++ A YL  +MV  G SP+ +T+  +++   +++   +
Sbjct: 618 SSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDV 677

Query: 309 -----------------------------------AFSFLDMLESEGHAPDLVFHNVLID 333
                                              A   L+ +   G APD +  N LI 
Sbjct: 678 ILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALIL 737

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEA 390
              K    D+A   Y  +L   + P+  TF +LL  +   GR      ++  +E   +E 
Sbjct: 738 GHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEP 797

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           + + Y+ L +   K     +A++LY  M+ KGF P   ++  L+     A  + +A  ++
Sbjct: 798 NNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELF 857

Query: 451 Q 451
           +
Sbjct: 858 K 858



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 69/314 (21%), Positives = 131/314 (41%), Gaps = 7/314 (2%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLN 199
           EM   G  P+    N ++    + G     +K+L E ++    PN +++N  +  L    
Sbjct: 579 EMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTG 638

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
            V   K ++  MV  GF P+      +L    +  R+     +   M+  G    +  + 
Sbjct: 639 AVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYN 698

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
            L+           A  + E+M+ +G +P+ +T+ +LI G  ++     AF+    +  +
Sbjct: 699 TLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQ 758

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
             +P++   N L+  L  +G   +A  V   + +  L P++ T+  L +           
Sbjct: 759 NISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEA 818

Query: 380 PKLVC---GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
            +L C   G      +  YNAL+S F KAG   QA +L+  M  +G  P + ++  L+ G
Sbjct: 819 MRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSG 878

Query: 437 LCGARKIDEAINVY 450
                +  ++ N Y
Sbjct: 879 WYDLAREQKSQNTY 892



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 101/250 (40%), Gaps = 9/250 (3%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           TG  E  + ++ E+   G    + T    L+   +     ++L+  + M   G   +   
Sbjct: 637 TGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITV 696

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N ++ VL   G       VL+E       P+ ++FN  +   CK + + N       M+
Sbjct: 697 YNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQML 756

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
            +   PN+  F  LL     +GRI EA  +L  M   G   +   + +L  G  +     
Sbjct: 757 HQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKV 816

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A  L+ +MV  G  P V TY +LI  F +A M + A      ++  G  P    +++L+
Sbjct: 817 EAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILV 876

Query: 333 DCLSKMGSYD 342
                 G YD
Sbjct: 877 S-----GWYD 881



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 95/251 (37%), Gaps = 18/251 (7%)

Query: 359 DSYTFCSLLSTVCLSGRFSLL-PKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
           D  +  +LL + C   R  LL P +          V YN LL+          A  +   
Sbjct: 72  DPASLNALLYSHC---RLRLLRPAIALLRSSRPTTVAYNILLAALSDHA---HAPAVLAE 125

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           M  +G   D  +   LL GLC   ++D A        + +     H    I    + AG 
Sbjct: 126 MCKRGVPFDGVTVNTLLAGLCRNGQVDAAA------ALADRGGGIHALDVIGWNTLIAGY 179

Query: 478 CH-----KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
           C       A+ +  R   +  P+DVV Y   + G    G+ + A  +   MK   V PN 
Sbjct: 180 CRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNV 239

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVE 592
            TY   ++ +C+ + ++    L + ++   + LD  T   L   + +    S A     E
Sbjct: 240 ATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFRE 299

Query: 593 MCNLGLIPDEM 603
           M  +G  P+ +
Sbjct: 300 MDKVGAAPNHV 310


>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 104/425 (24%), Positives = 202/425 (47%), Gaps = 7/425 (1%)

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGR----VDLGIKVLKETQLPNFLSFNIALCN 194
           LE FD+M R GF  +      +++ L K  +    V+L  ++L E    NF ++ + + +
Sbjct: 29  LELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVELHRRMLSEICSGNFFTYGLVIDS 88

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           LCK         +   M+  G  PNV ++  L+N  C++G++ EA  L   M++ G   +
Sbjct: 89  LCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKAN 148

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           V  +  LI    R      A   + +MV  G  P+VVT+T+LI    +      A+   +
Sbjct: 149 VITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFE 208

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
           ++  +G AP++V +N L++ L      D A+ +++ ++E  +  D  ++ +L++  C SG
Sbjct: 209 LMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSG 268

Query: 375 RFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
           +      L   ++ E     +  Y  LL    + G    A +L+N M   G +P   ++ 
Sbjct: 269 KTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYT 328

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            LL GLC    I+EAI+V++ +       +  +++ ++  + +A R   A+++F      
Sbjct: 329 VLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTV 388

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
               ++V+Y + I GL + G+  EA  L+ QM+      +  ++  ++  F +E  ++  
Sbjct: 389 GLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKA 448

Query: 552 KRLLQ 556
              L+
Sbjct: 449 MEFLK 453



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/428 (23%), Positives = 194/428 (45%), Gaps = 38/428 (8%)

Query: 177 LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC------- 229
           +K    PN ++ +  +  +C    V +  ++   M R GF  ++ ++  L+N        
Sbjct: 1   MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60

Query: 230 ----------------------------FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVL 261
                                        CK G   +  ++   MI +G   +V  ++ L
Sbjct: 61  RRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSL 120

Query: 262 IDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH 321
           I+G  R+ +L  A  L+++MV  G   NV+TY SLI       ++  A      +  EG 
Sbjct: 121 INGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGI 180

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---L 378
            PD+V    LID LSK G   +A  +++ +++    P+  T+ SLL+ +CL  +      
Sbjct: 181 LPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVR 240

Query: 379 LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
           L +++    ++ D++ YN L++ +C +G   +A+ L+  M  +  TP   ++  LL+ L 
Sbjct: 241 LFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALY 300

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
              +I  A  ++  + +   + +   +T ++D L + G   +AI +FR     KY   + 
Sbjct: 301 QNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIR 360

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
            Y++ I G+ +  R E A  ++ ++  + + PN  TY +M+   CKE  +   +RL   +
Sbjct: 361 IYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQM 420

Query: 559 IDARIELD 566
            ++  E D
Sbjct: 421 EESGCEQD 428



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 92/400 (23%), Positives = 188/400 (47%), Gaps = 17/400 (4%)

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
           ++ G+ PN+     L+   C  G++ +A +L   M   G    +  +  LI+  R+ R+ 
Sbjct: 1   MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
             A  L  +M+   CS N  TY  +I    +  +          + + G  P+++ ++ L
Sbjct: 61  RRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSL 120

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL------VCG 385
           I+ L ++G   +A++++D ++   +  +  T+ SL+   C   RF L  +       + G
Sbjct: 121 INGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASC---RFGLWKEATRTFSQMVG 177

Query: 386 LEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
             +  D+V +  L+ +  K G   +A K++  M+ +G  P+  ++  LL GLC   ++D 
Sbjct: 178 EGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDH 237

Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
           A+ +++ +V     ++   +  +++    +G+  +A+ LFR+   E+    + +YT+ ++
Sbjct: 238 AVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLK 297

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
            L + GR   A  L++ M+     P+  TY V+L   CK   I+       DV  +   +
Sbjct: 298 ALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAI----DVFRSLKSI 353

Query: 566 DYHTSIRLTKFI----FKFHSSSSAVNQLVEMCNLGLIPD 601
            Y  SIR+   +    F+     SA+    E+  +GL+P+
Sbjct: 354 KYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPN 393



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 92/390 (23%), Positives = 176/390 (45%), Gaps = 11/390 (2%)

Query: 151 TPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKD 206
           + N F   +V+D L K G    G+K+ +E       PN + ++  +  LC++  +    +
Sbjct: 76  SGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVN 135

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
           +   MV +G   NV  +  L++  C+ G   EA +    M+  G    V  +T LID   
Sbjct: 136 LFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLS 195

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
           +  ++  A  ++E M++ G +PN+VTY SL+ G         A    +++   G   D++
Sbjct: 196 KKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVI 255

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---- 382
            +N LI+     G  ++A+ ++  +   +L P   T+  LL  +  +GR     +L    
Sbjct: 256 SYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNM 315

Query: 383 -VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
            +CG     D   Y  LL   CK G   +A+ ++ ++    + P    +  L+ G+  AR
Sbjct: 316 QICGQSPSLD--TYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQAR 373

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYT 501
           + + A+ ++  I       N   +  +++ L + G+  +A +LF +        D +S+ 
Sbjct: 374 RWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFN 433

Query: 502 VAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
             IRG L+  + ++A     +M+     PN
Sbjct: 434 FIIRGFLQENQVQKAMEFLKRMREKNFSPN 463



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/361 (22%), Positives = 162/361 (44%), Gaps = 7/361 (1%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCK 197
           FDEM   G   N    N ++    + G      +       E  LP+ ++F   + +L K
Sbjct: 137 FDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSK 196

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              V     +  +M+++G  PN+  +  LLN  C   ++  A +L  +M+  G  + V +
Sbjct: 197 KGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVIS 256

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  LI+G+    + + A  L+ KM     +P++ TYT L+K   +      A    + ++
Sbjct: 257 YNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQ 316

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G +P L  + VL+D L K G  ++A+DV+  L  +K  P    +  L+  +  + R+ 
Sbjct: 317 ICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWE 376

Query: 378 LLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
              ++   +  + +  ++V YN +++  CK G   +A +L+  M + G   D  SF  ++
Sbjct: 377 SAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFII 436

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
           RG     ++ +A+   + +   N + N  V   +V+      +  +    F   +V+K  
Sbjct: 437 RGFLQENQVQKAMEFLKRMREKNFSPNDSVTLMLVNLYAADAQSSELPNNFLHELVQKKT 496

Query: 495 L 495
           L
Sbjct: 497 L 497


>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
 gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
          Length = 698

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 101/426 (23%), Positives = 195/426 (45%), Gaps = 13/426 (3%)

Query: 147 RFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVS 202
           RFGF  +    N ++DV  +  R      +LK        P+  ++N+ +   C   +  
Sbjct: 112 RFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPE 171

Query: 203 NVKDVIGMMVRK-GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVL 261
               VI  M    G  P+++   ++L+  CK G++  A       +     +S   +++L
Sbjct: 172 EAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFE-AVRRSMPVSAATFSIL 230

Query: 262 IDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH 321
           I+G  +   +  A  L ++   NGC+ ++ TYT+++    + K    A + ++ + + G 
Sbjct: 231 INGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGC 290

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FS 377
            P +  +N L++ L KMG  ++A+D+   +++    PD  T+ SL+  +    R    + 
Sbjct: 291 TPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYK 350

Query: 378 LLPKLVC-GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
           L  ++   GL +  D V Y AL+    + G   QA  +Y TM   G  PD  +   ++ G
Sbjct: 351 LFKEMASRGLAL--DTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDG 408

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
           L  A +I  A+ +++ +     A N  V++A++  L +A +   A+++  +        D
Sbjct: 409 LSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPD 468

Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
            ++Y + I GL + G  E A   + +M      P+ YTY +++   CK  N      +L 
Sbjct: 469 TITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLD 528

Query: 557 DVIDAR 562
           D+  +R
Sbjct: 529 DMSSSR 534



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 115/503 (22%), Positives = 227/503 (45%), Gaps = 26/503 (5%)

Query: 41  HQDFPIILAPHI-VHSTLLN--CPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLT 97
            +DF +  AP +  H+ +L+  C S  +  +   + A +R       +F  +I+ + +  
Sbjct: 181 EEDFGV--APSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRSMPVSAATFSILINGLVK-A 237

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G       +  E    GC I   T+   +    + +     +   +++   G TP     
Sbjct: 238 GMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATY 297

Query: 158 NIVMDVLFKIGR----VDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N +++ L K+GR    +DL  K++     P+ +++   +  L K         +   M  
Sbjct: 298 NALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMAS 357

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +G   +   +  L+    + G+I +A  +   M + G    V   + +IDG  +  R+  
Sbjct: 358 RGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGA 417

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  +++ M   G +PN V Y++LI G  +A+    A   L  ++     PD + +N+LID
Sbjct: 418 AVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILID 477

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL--EVEAD 391
            L K G  + A   +D +LE    PD YT+  L+S +C +G         CG+  ++ + 
Sbjct: 478 GLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGN----TDAACGVLDDMSSS 533

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
             VY++L+   CK+G       L++ M   G   ++ +   L+  LC A ++DEA++++ 
Sbjct: 534 RFVYSSLVDGLCKSGKLEGGCMLFHEMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLFN 592

Query: 452 GIV---MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
            I    M +P    + + +I+  LI++G+ ++   +++  +   +  D V+Y   + G++
Sbjct: 593 AIRKEGMPHP----YAYNSIISALIKSGKVNEGQAVYQE-MTRWWKPDRVTYNALLNGMI 647

Query: 509 EGGRTEEAYILYSQMKHIA-VPP 530
              R + A+  Y +M     VPP
Sbjct: 648 GANRMDRAHYYYLEMTGRGYVPP 670



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 2/212 (0%)

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTML-DKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
           D+  +N L++ +C A  P +A  +   M  D G  P   +   +L GLC + K+  A++ 
Sbjct: 153 DVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDH 212

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
           ++ +  + P V+A   + +++ L++AG   +A  L +        +D+ +YT  +  L +
Sbjct: 213 FEAVRRSMP-VSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAK 271

Query: 510 GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
             + +EA  L  ++      P   TY  +L   CK   ++    LL+ ++D     D  T
Sbjct: 272 NKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVT 331

Query: 570 SIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
              L   + K   S  A     EM + GL  D
Sbjct: 332 YTSLIDGLGKEKRSFEAYKLFKEMASRGLALD 363


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 113/471 (23%), Positives = 210/471 (44%), Gaps = 10/471 (2%)

Query: 140 EAF-DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCN 194
           EAF  +M   G  P+ +  N ++      G+    ++V KE +    LP+ ++ N  + +
Sbjct: 276 EAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGS 335

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           LCK   +   +DV   M  KG  P+V  + I+LN +   G + +   L  LM+  G +  
Sbjct: 336 LCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPV 395

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           +  + VLI  +     LD A  ++ +M  +G  P+VVTY ++I           A    +
Sbjct: 396 ICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFN 455

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            +  +G  PD   ++ LI      GS   A ++   ++   +  D   F S+++ +C  G
Sbjct: 456 QMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLG 515

Query: 375 RF---SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
           R      +  L   + +  D VVYN L+  +C  G   +A+++++ M+  G  P+   + 
Sbjct: 516 RVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYG 575

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            L+ G C   +IDE +++++ ++      +  ++  I+D L EAGR   A   F      
Sbjct: 576 TLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTES 635

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
              ++  +Y++ +RGL +    +EA  L+ +++ + V  +  T   M+    + R ++  
Sbjct: 636 GIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEA 695

Query: 552 KRLLQDVI-DARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           K L   +     +      SI +T  I K      A +    M N G  PD
Sbjct: 696 KDLFASISRSGLVPCAVTYSIMITNLI-KEGLVEEAEDMFSSMQNAGCEPD 745



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 110/459 (23%), Positives = 200/459 (43%), Gaps = 39/459 (8%)

Query: 150 FTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVK 205
            +P ++   I+MD   +  R +L +    ++L+     + +  +  L   C+        
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 168

Query: 206 DVIGMMVRK-GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT--SLSVNAWTVLI 262
           D++     + G  P+V  + ILL   C  G+  +A  LL +M   GT  S  V A+  +I
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVI 228

Query: 263 DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
           DGF +   ++ A  L+++MVQ G  P++VTY+S++    +A+    A +FL  + ++G  
Sbjct: 229 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 288

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL 382
           PD   +N LI   S  G + +A+ V+    E++                   R S+LP  
Sbjct: 289 PDNWTYNNLIYGYSSTGQWKEAVRVFK---EMR-------------------RQSILP-- 324

Query: 383 VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
                   D+V  N L+   CK G   +A  +++TM  KG  PD +S+  +L G      
Sbjct: 325 --------DVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGC 376

Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTV 502
           + +  +++  ++ +  A        ++      G   KA+ +F           VV+Y  
Sbjct: 377 LVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMT 436

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
            I  L   G+ ++A   ++QM    V P+ Y Y  ++  FC   ++   K L+ ++++  
Sbjct: 437 VIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNG 496

Query: 563 IELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           + LD      +   + K      A N      N+GL PD
Sbjct: 497 MRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPD 535



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 83/408 (20%), Positives = 177/408 (43%), Gaps = 44/408 (10%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIK----- 175
           TF + ++ Y    M    +  F+EM   G  P+      V+  L +IG++D  ++     
Sbjct: 398 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQM 457

Query: 176 ------------------------VLKETQLP----------NFLSFNIALCNLCKLNDV 201
                                   +LK  +L           + + F   + NLCKL  V
Sbjct: 458 IDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRV 517

Query: 202 SNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVL 261
            + +++  + V  G +P+  ++ +L++ +C +G++ +A ++   M++ G   +V  +  L
Sbjct: 518 MDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTL 577

Query: 262 IDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA-KMFSIAFSFLDMLESEG 320
           ++G+ ++ R+D    L+ +M+Q G  P+ + Y  +I G  EA +       F +M ES G
Sbjct: 578 VNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTES-G 636

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
            A +   +++++  L K   +D+A+ ++  L  + +  D  T  ++++ +  + R     
Sbjct: 637 IAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAK 696

Query: 381 KLVCGLEVEADL---VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
            L   +     +   V Y+ +++   K G   +A  ++++M + G  PD+     ++R L
Sbjct: 697 DLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVREL 756

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
               +I  A      I   N ++       +VD     G C + I+  
Sbjct: 757 LKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 804


>gi|356536611|ref|XP_003536830.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 578

 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 110/447 (24%), Positives = 210/447 (46%), Gaps = 30/447 (6%)

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
           LP+ + F   L  + K+   +   D+  +M  KG  P    F IL+NCFC MG++  A+ 
Sbjct: 51  LPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFTVTFNILINCFCHMGQMDFAFS 110

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           ++G ++  G   +V  +T L+ GF    ++  A Y++++MV      + V Y +LI G  
Sbjct: 111 VMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEMVARRIRFDDVLYGTLINGLC 170

Query: 302 EAKMFS--IAFSFLD-MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP 358
           ++K+     A   L  M E +   P+L+ +N ++  L K G+ ++A  +   ++   + P
Sbjct: 171 KSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCKDGNINEARVLCSKMIVQGIFP 230

Query: 359 DSYTFCSLLSTVCLSGRFSLLPKLVCGLEV-------------------EADLVVYNALL 399
           D +T+ SL+  +C +G+   +  L+ G  +                   + D++ YN L+
Sbjct: 231 DIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARELFNVMIERGEQHDIINYNILM 290

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
           + +C      +A KL++ M+++G  PD  ++  L+ G C   K+DEA N++ G++     
Sbjct: 291 NGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLV 350

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            +   +  ++    +  R  +A+ L     ++    ++++Y   + GL + G   +A+ L
Sbjct: 351 PDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVVDGLCKSGGILDAWKL 410

Query: 520 YSQMKHIA-VPPNAYTYRVMLLSFCK----ERNIKMVKRLLQDVIDARIELDYHTSIRLT 574
             +M +    PP+  TY ++L S C+    E+ I   K L+ +   A     Y+    L 
Sbjct: 411 VDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKHLIFERSFAPNVWSYNI---LI 467

Query: 575 KFIFKFHSSSSAVNQLVEMCNLGLIPD 601
               K      A+N    MC   L+PD
Sbjct: 468 SGCCKNRRLDEAINLFNHMCFKNLVPD 494



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 108/466 (23%), Positives = 214/466 (45%), Gaps = 28/466 (6%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEM--GRFGFTPNTF 155
           G+ +    ++G++ + GC     TF   ++ +   +     L  +DEM   R  F    +
Sbjct: 103 GQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEMVARRIRFDDVLY 162

Query: 156 ARNIVMDVLFKIGRVDLGIKVLK---ETQL--PNFLSFNIALCNLCKLNDVSNVKDVIGM 210
              I      KIG+    +++L+   E QL  PN + +N  +  LCK  +++  + +   
Sbjct: 163 GTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCKDGNINEARVLCSK 222

Query: 211 MVRKGFYPNVRMFEIL----------------LNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           M+ +G +P++  +  L                LN FC   ++ EA +L  +MI  G    
Sbjct: 223 MIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARELFNVMIERGEQHD 282

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           +  + +L++G+    ++  A  L+  MV+ G  P+ +TYT L+ G+        A +   
Sbjct: 283 IINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYCLIDKVDEARNLFH 342

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            +   G  PD+  +N+LI    K     +A+++ + +    LVP+  T+ S++  +C SG
Sbjct: 343 GMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVVDGLCKSG 402

Query: 375 ----RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTML-DKGFTPDNYS 429
                + L+ ++    +   D+  YN LL   C+     +A+  +  ++ ++ F P+ +S
Sbjct: 403 GILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKHLIFERSFAPNVWS 462

Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
           +  L+ G C  R++DEAIN++  +   N   +   +  ++D L    +  KAI L  + +
Sbjct: 463 YNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQLDKAIALLVQIV 522

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
            +    ++ +Y + I GL +GGR + A  +   +      P+  TY
Sbjct: 523 DQGISPNLRTYNILINGLHKGGRPKTAQKISLYLSIRGYHPDVKTY 568



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 101/236 (42%), Gaps = 6/236 (2%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           L  + +  R +   +   G V    ++ + ++ Y + E  G  +   ++M      PN  
Sbjct: 330 LIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNII 389

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKETQL-----PNFLSFNIALCNLCKLNDVSNVKDVIGM 210
             N V+D L K G +    K++ E        P+  ++NI L +LC++  V         
Sbjct: 390 TYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKH 449

Query: 211 MV-RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLR 269
           ++  + F PNV  + IL++  CK  R+ EA  L   M        +  + +L+D     +
Sbjct: 450 LIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQ 509

Query: 270 RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL 325
           +LD A  L  ++V  G SPN+ TY  LI G  +      A      L   G+ PD+
Sbjct: 510 QLDKAIALLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQKISLYLSIRGYHPDV 565


>gi|449494638|ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49730-like [Cucumis sativus]
          Length = 664

 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 103/482 (21%), Positives = 213/482 (44%), Gaps = 40/482 (8%)

Query: 42  QDFPIILAPHIVHSTLLNC-PSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRF 100
           Q+  +I+   +    L  C  +  +   FF+W +KQ  Y H  + +  MI  + ++  +F
Sbjct: 122 QESGVIMRSGLPERVLSRCGDAGNLGYRFFVWASKQPGYRHSYEVYKAMIKTLGKMR-QF 180

Query: 101 ETVRGIVGELARVGC-VIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNI 159
             V  ++ E+ +    ++  + F++ +R +    M    +E  DEM ++G  P+ +    
Sbjct: 181 GAVWALIEEMRKENPYMLTPEVFIVLMRRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGC 240

Query: 160 VMDVLFKIGRVDLGIKVLKETQL---PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
           ++D L K G V     + ++ ++   PN   F   L   C+   +   K V+  +   GF
Sbjct: 241 LLDALCKNGSVKEAASLFEDMRVRFNPNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGF 300

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
            P++ ++  LL  + + G++ +A+ LL  M  +    +  ++T+LI  F +  ++D A  
Sbjct: 301 EPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMR 360

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           ++ +M  +GC  +VVTYT+LI GF +      A+  LD +  +GH P  + +  ++    
Sbjct: 361 IFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHE 420

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYN 396
           K    ++ +++ + + ++  VP                                DL +YN
Sbjct: 421 KKEELEECMELIEEMRKIGCVP--------------------------------DLNIYN 448

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            ++   CK G   +AV+L+  M   G  P   +++ ++ G      + EA + ++ +V  
Sbjct: 449 TMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEACDYFKEMVER 508

Query: 457 N--PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
               A        + + L+ A +   A  ++     +   L+V ++T+ I  L   G  +
Sbjct: 509 GLLSAPQYGTLKELTNALLRAEKLEMAKNMWSCMTTKGCELNVSAWTIWIHALFSNGHVK 568

Query: 515 EA 516
           EA
Sbjct: 569 EA 570



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 83/369 (22%), Positives = 151/369 (40%), Gaps = 9/369 (2%)

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVT---YTSLIKGFMEAKMF 306
           G   S   +  +I    ++R+      L E+M +   +P ++T   +  L++ F   +M 
Sbjct: 159 GYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKE--NPYMLTPEVFIVLMRRFASVRMV 216

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
             A   LD +   G  PD      L+D L K GS  +A  +++ +  ++  P+   F SL
Sbjct: 217 KKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDM-RVRFNPNLRHFTSL 275

Query: 367 LSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           L   C  G+      ++  ++    E D+VVYN LL  + +AG    A  L   M     
Sbjct: 276 LYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNC 335

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
            P+  SF  L++  C   K+DEA+ ++  +  +    +   +T ++    + G   KA +
Sbjct: 336 GPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYE 395

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           +    I + +    +SY   +    +    EE   L  +M+ I   P+   Y  M+   C
Sbjct: 396 ILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVC 455

Query: 544 KERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           K  ++K   RL  ++    +     T I +            A +   EM   GL+    
Sbjct: 456 KLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEACDYFKEMVERGLLSAPQ 515

Query: 604 WRKLGLLSD 612
           +  L  L++
Sbjct: 516 YGTLKELTN 524



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/356 (18%), Positives = 145/356 (40%), Gaps = 31/356 (8%)

Query: 32  SSPKVCATTHQDFPIILAPHIVHSTLLNCPSDLIALSFFIWCA--------------KQR 77
            S K  A+  +D  +   P++ H T L           + WC               K+ 
Sbjct: 249 GSVKEAASLFEDMRVRFNPNLRHFTSL----------LYGWCREGKIMEAKHVLVQIKEA 298

Query: 78  DYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGM 137
            +  D+  +++++    +  G+      ++ E+ +V C   A +F + ++ + + E    
Sbjct: 299 GFEPDIVVYNNLLGGYAQ-AGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDE 357

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALC 193
            +  F EM   G   +      ++    K G  D   ++L    ++   P+ LS+   + 
Sbjct: 358 AMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMM 417

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
              K  ++    ++I  M + G  P++ ++  ++   CK+G + EA +L G M   G + 
Sbjct: 418 AHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNP 477

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG--CSPNVVTYTSLIKGFMEAKMFSIAFS 311
            ++ + +++ GF     L  A   +++MV+ G   +P   T   L    + A+   +A +
Sbjct: 478 GLDTYILMVHGFLSQGCLVEACDYFKEMVERGLLSAPQYGTLKELTNALLRAEKLEMAKN 537

Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
               + ++G   ++    + I  L   G   +A      +++  L+P   TF  L+
Sbjct: 538 MWSCMTTKGCELNVSAWTIWIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLM 593


>gi|413934035|gb|AFW68586.1| hypothetical protein ZEAMMB73_127077 [Zea mays]
          Length = 800

 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 126/505 (24%), Positives = 229/505 (45%), Gaps = 36/505 (7%)

Query: 138 VLEAFDEM-GRFGFTPNTFARNIVMDVLFKI-GRVDLGI----KVLKETQLPNFLSFNIA 191
            +EAF  M G FG  P TF  N V+ VL    G V L +    +++    LPN  ++N+ 
Sbjct: 158 AVEAFSRMEGEFGCRPTTFVYNAVLRVLVASGGAVPLALALYNRMVAAGCLPNRATYNVL 217

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           +  LCK     +   +   M+ +G  PNV+   ILL+  C  G++ EA  LL  M   G 
Sbjct: 218 IHGLCKRGTPVDALKLFDEMISRGITPNVKTHTILLSSMCNAGQLKEAENLLHSMEDKGC 277

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGC-SPNVVTYTSLIKGFMEAKMFSIAF 310
                 +   + G  +  R+D A    E +   G     +  Y+ LI G   A  +   F
Sbjct: 278 PPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLKGYSCLIDGLFLAGRYEEGF 337

Query: 311 S-FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
             ++++LE    +PD+V + ++I   ++ G  +DA   +D + E    PD++ + +LL  
Sbjct: 338 QCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKA 397

Query: 370 VC----LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
           +C    L G  SL+ ++V    V  D+  Y  ++   CK    ++A+++++ M++ G  P
Sbjct: 398 LCDAGDLDGARSLMSEMVRN-NVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHP 456

Query: 426 DNYSFVGLLRGLCGARKIDEA-INVYQGIVMNNPAV------------NAHVHTAIVDRL 472
              ++  L+ GL  A +++EA +  Y+  V NNP++            ++     +V+ +
Sbjct: 457 SVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVRDSETLQKLVESM 516

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
            ++G+  KA +L R  I      DVV+Y   + GL +    + A  L+ +++    P + 
Sbjct: 517 CQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFPLDE 576

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVE 592
            TY  ++ S  +         L QD++ +           + + + +    S A+N    
Sbjct: 577 ITYGTLIDSLLRAHRYNDALTLFQDILHSGGTPSMPIYNSMMRSLCRMQKLSQAIN---- 632

Query: 593 MCNLGLIPDEMWRKLGLLS-DETMT 616
                L  D + RK  LL+ DE ++
Sbjct: 633 -----LWFDHLPRKYNLLAQDEVIS 652



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 103/450 (22%), Positives = 195/450 (43%), Gaps = 29/450 (6%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFG-FTPNTF 155
            G+ +    ++  +   GC     T+  FL    +       +E  + +   G F     
Sbjct: 259 AGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLK 318

Query: 156 ARNIVMDVLFKIGRVDLG----IKVLKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGM 210
             + ++D LF  GR + G    ++VL++  + P+ + + I +    +    ++       
Sbjct: 319 GYSCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDE 378

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M  KGF P+   +  LL   C  G +  A  L+  M+     L ++ +T +I G  + + 
Sbjct: 379 MKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQL 438

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH-- 328
           +D A  +++ MV+ GC P+V+TY  LI G   A     A      +E  G+ P L     
Sbjct: 439 VDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKMEV-GNNPSLFLRLT 497

Query: 329 ------------NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC----L 372
                         L++ + + G    A  +  G+++  +VPD  T+ +LL+ +C    L
Sbjct: 498 LGANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNL 557

Query: 373 SGRFSLLPKL-VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
            G   L  +L V G  +  D + Y  L+    +A   N A+ L+  +L  G TP    + 
Sbjct: 558 DGALRLFRELQVKGFPL--DEITYGTLIDSLLRAHRYNDALTLFQDILHSGGTPSMPIYN 615

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT-AIVDRLIEAGRCHKAIQLFRRAIV 490
            ++R LC  +K+ +AIN++   +     + A     +   +  E G  H+A++   +   
Sbjct: 616 SMMRSLCRMQKLSQAINLWFDHLPRKYNLLAQDEVISSARKKFEEGCLHEAVRELIKIDQ 675

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
           E   ++   YT+ + GL++ GR E+A  ++
Sbjct: 676 EYGSVNSCPYTIWLIGLIQAGRIEDALKIF 705



 Score = 42.0 bits (97), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 66/167 (39%), Gaps = 9/167 (5%)

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLI----EAGRCHKAIQLFRRAIVE--KYPLDV 497
           D    +Y  I  +  A      TA  + LI     AGR H+A++ F R   E    P   
Sbjct: 118 DADAAMYDAIA-DAQAAGLQPPTAAFEALIFAHASAGRHHEAVEAFSRMEGEFGCRPTTF 176

Query: 498 VSYTVAIRGLL-EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
           V Y   +R L+  GG    A  LY++M      PN  TY V++   CK        +L  
Sbjct: 177 V-YNAVLRVLVASGGAVPLALALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFD 235

Query: 557 DVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           ++I   I  +  T   L   +        A N L  M + G  PDE+
Sbjct: 236 EMISRGITPNVKTHTILLSSMCNAGQLKEAENLLHSMEDKGCPPDEV 282


>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 901

 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 135/599 (22%), Positives = 240/599 (40%), Gaps = 57/599 (9%)

Query: 61  PSDLIALSFFIWCAKQ---RDYFHDVQ-----SFDHMISVVTRLTGRFETVR------GI 106
           PS    +   + C K    R+ F  +Q      F    S  T L G   +V+       +
Sbjct: 161 PSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTL 220

Query: 107 VGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK 166
             ++  +G  +    F   +R++ R       L   DEM       +    N+ +D   K
Sbjct: 221 FHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGK 280

Query: 167 IGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
            G+VD+  K   E +    LP+ +++   +  LCK N +    ++   M +    P    
Sbjct: 281 AGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYA 340

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           +  ++  +   G+  EAY LL      G   SV A+  ++    +  RL  A   +E+M 
Sbjct: 341 YNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMK 400

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
           ++  +PN+ TY  LI    +A     AF   D ++  G  P+++  N++ID L K    D
Sbjct: 401 KDA-APNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLD 459

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS-------------LLPKLV------ 383
           +A  +++G+      PD  TFCSL+  +   GR                +P  V      
Sbjct: 460 EACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLI 519

Query: 384 -----CGLEVEA--------------DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
                CG + +               DL + NA +    KAG   +   L+  +  +GF 
Sbjct: 520 KSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFI 579

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           PD  S+  L+ GL  A    E   ++  +      ++ H +   +D   ++G+ +KA QL
Sbjct: 580 PDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQL 639

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
                 +     VV+Y   I GL +  R +EAY+L+ + K   +  N   Y  ++  F K
Sbjct: 640 LEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGK 699

Query: 545 ERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
              I     ++++++   +  + +T   L   + K    + A+     M NL   P+ +
Sbjct: 700 VGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHI 758



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 108/456 (23%), Positives = 193/456 (42%), Gaps = 35/456 (7%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ---LPNFLSFNIALCNLCKLNDVSNVK 205
           G  P+  A N ++  L K GR+   ++  +E +    PN  ++N+ +  LCK  +V    
Sbjct: 368 GCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAAPNLSTYNVLIDMLCKAGEVEAAF 427

Query: 206 DVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF 265
            V   M   G +PNV    I+++  CK  ++ EA  +   M     S     +  LIDG 
Sbjct: 428 KVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGL 487

Query: 266 RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL 325
            +  R+D A  L+E+M+ +   PN V YTSLIK F +             +   G +PDL
Sbjct: 488 GKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDL 547

Query: 326 VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCG 385
              N  +DC+ K G       +++ +     +PD                          
Sbjct: 548 RLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPD-------------------------- 581

Query: 386 LEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
                 ++ Y+ L+    KAGF  +  +L+  M ++G   D +++   + G C + K+++
Sbjct: 582 ------VMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNK 635

Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
           A  + + +           + +++D L +  R  +A  LF  A      L+VV Y+  I 
Sbjct: 636 AYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLID 695

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
           G  + GR +EAY++  ++    + PN YT+  +L +  K   I       Q++ + +   
Sbjct: 696 GFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTP 755

Query: 566 DYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           ++ T   L   + +    + A     EM   GL P+
Sbjct: 756 NHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPN 791



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 164/338 (48%), Gaps = 7/338 (2%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           F EM   G +P+    N  MD +FK G    G  + +E +    +P+ +S++I +  L K
Sbjct: 535 FKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVK 594

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
                   ++   M  +G   +   +   ++ FCK G++ +AYQLL  M T G   +V  
Sbjct: 595 AGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVT 654

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  +IDG  ++ RLD A  L+E+   NG   NVV Y+SLI GF +      A+  ++ L 
Sbjct: 655 YGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELM 714

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
            +G  P++   N L+D L K    ++AL  +  +  LK  P+  T+  L++ +C   +F+
Sbjct: 715 QKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFN 774

Query: 378 ---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
              +  + +    ++ + + Y  +++   KAG   +A  L+      G  PD+ S+  ++
Sbjct: 775 KAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAII 834

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
            GL  +R+  EA  +++   M    ++     A++D L
Sbjct: 835 EGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDAL 872



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 110/504 (21%), Positives = 220/504 (43%), Gaps = 43/504 (8%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
            G+F+    ++      GC+     +   L    +    G  L  F+EM +    PN   
Sbjct: 351 AGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDA-APNLST 409

Query: 157 RNIVMDVLFKIGRVDLGIKV---LKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N+++D+L K G V+   KV   +KE  L PN ++ NI +  LCK   +     +   M 
Sbjct: 410 YNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMN 469

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
            K   P+   F  L++   K GR+ +AY+L   M+      +   +T LI  F +  R +
Sbjct: 470 HKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKE 529

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
               ++++M+  GCSP++    + +    +A       +  + ++S G  PD++ +++LI
Sbjct: 530 DGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILI 589

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKL------ 382
             L K G   +  +++  + E   V D++ + + +   C SG+    + LL ++      
Sbjct: 590 HGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQ 649

Query: 383 ---------VCGLE-------------------VEADLVVYNALLSYFCKAGFPNQAVKL 414
                    + GL                    +E ++V+Y++L+  F K G  ++A  +
Sbjct: 650 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLI 709

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
              ++ KG TP+ Y++  LL  L  A +I+EA+  +Q +       N   ++ +++ L  
Sbjct: 710 MEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCR 769

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
             + +KA   ++    +    + ++YT  I GL + G   EA  L+ + K     P++ +
Sbjct: 770 VRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSAS 829

Query: 535 YRVMLLSFCKERNIKMVKRLLQDV 558
           Y  ++      R      ++ ++ 
Sbjct: 830 YNAIIEGLSYSRRAMEAYKIFEET 853



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/377 (25%), Positives = 161/377 (42%), Gaps = 36/377 (9%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDV 207
           PN      ++   FK GR + G K+ KE       P+    N  +  + K  +    + +
Sbjct: 510 PNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRAL 569

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
              +  +GF P+V  + IL++   K G   E Y+L   M   G  L  +A+   IDGF +
Sbjct: 570 FEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCK 629

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
             +++ A  L E+M   G  P VVTY S+I G  +      A+   +  +S G   ++V 
Sbjct: 630 SGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVI 689

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE 387
           ++ LID   K+G  D+A  + + L++  L P+ YT                         
Sbjct: 690 YSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYT------------------------- 724

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
                  +N LL    KA   N+A+  +  M +   TP++ ++  L+ GLC  RK ++A 
Sbjct: 725 -------WNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAF 777

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
             +Q +       N   +T ++  L +AG   +A  LF R        D  SY   I GL
Sbjct: 778 VFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGL 837

Query: 508 LEGGRTEEAYILYSQMK 524
               R  EAY ++ + +
Sbjct: 838 SYSRRAMEAYKIFEETR 854



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 112/566 (19%), Positives = 229/566 (40%), Gaps = 106/566 (18%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
           A+S+F W  ++ D     +++D ++ V+ +   +F+    I+GE++  G     +T +  
Sbjct: 111 AISYFRWTERKTDQALCPEAYDSLLLVMAKNV-KFDYFEQILGEMSIAGFGPSTKTCIEL 169

Query: 126 LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF 185
           +    +        +    M +F F P   A   ++  L  +   D+ + +  + Q    
Sbjct: 170 ILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQ---- 225

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGL 245
                                        G+  +V +F  ++  F + GR+  A  LL  
Sbjct: 226 ---------------------------ELGYEVSVHLFTTVIRVFAREGRLDAALSLLDE 258

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIK------- 298
           M +      +  + V ID F +  ++DMA   + ++  +G  P+ VTYTS+I        
Sbjct: 259 MKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNR 318

Query: 299 ----------------------------GFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
                                       G+  A  F  A+S L+  ++ G  P ++ +N 
Sbjct: 319 LDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNC 378

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA 390
           ++ CL K G   +AL  ++  ++    P+  T+  L+  +C +G      K+   ++   
Sbjct: 379 ILTCLGKKGRLGEALRTFEE-MKKDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAG 437

Query: 391 ---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
              +++  N ++   CKA   ++A  ++  M  K  +PD  +F  L+ GL    ++D+A 
Sbjct: 438 LFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAY 497

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR--------------------- 486
            +Y+ ++ ++   NA V+T+++    + GR     ++F+                     
Sbjct: 498 RLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCV 557

Query: 487 ---------RAIVEK-----YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
                    RA+ E+     +  DV+SY++ I GL++ G   E Y L+  MK      + 
Sbjct: 558 FKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDT 617

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDV 558
           + Y   +  FCK   +    +LL+++
Sbjct: 618 HAYNTFIDGFCKSGKVNKAYQLLEEM 643



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 100/437 (22%), Positives = 192/437 (43%), Gaps = 19/437 (4%)

Query: 205 KDVIGMMVRKGFYPNVRM-FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLID 263
           + ++G M   GF P+ +   E++L+C  K  ++ E + L+  M       + +A+T LI 
Sbjct: 148 EQILGEMSIAGFGPSTKTCIELILSCI-KSNKLREGFDLIQCMRKFKFRPAFSAYTTLIG 206

Query: 264 GFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP 323
               ++  D+   L+ +M + G   +V  +T++I+ F        A S LD ++S     
Sbjct: 207 ALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHA 266

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV 383
           D+V +NV IDC  K G  D A   +  +    L+PD  T+ S++  +C   R     ++ 
Sbjct: 267 DIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIF 326

Query: 384 CGLEVEADL---VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
             +E   ++     YN ++  +  AG  ++A  L      +G  P   ++  +L  L   
Sbjct: 327 EQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKK 386

Query: 441 RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK--YPLDVV 498
            ++ EA+  ++ +   + A N   +  ++D L +AG    A ++ R A+ E   +P +V+
Sbjct: 387 GRLGEALRTFEEM-KKDAAPNLSTYNVLIDMLCKAGEVEAAFKV-RDAMKEAGLFP-NVM 443

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           +  + I  L +  + +EA  ++  M H    P+  T+  ++    K+  +    RL + +
Sbjct: 444 TVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQM 503

Query: 559 IDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD----EMWRKLGLLSDET 614
           +D+    +      L K  FK            EM + G  PD      +      + ET
Sbjct: 504 LDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGET 563

Query: 615 MTPVSLFD-----GFVP 626
               +LF+     GF+P
Sbjct: 564 GKGRALFEEIKSRGFIP 580



 Score = 41.2 bits (95), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 34/182 (18%), Positives = 68/182 (37%), Gaps = 4/182 (2%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR +    I+ EL + G      T+   L    + E     L  F  M     TPN    
Sbjct: 701 GRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITY 760

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           +I+++ L ++ + +      +E Q     PN +++   +  L K  +++    +      
Sbjct: 761 SILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKA 820

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G  P+   +  ++       R  EAY++       G ++       L+D  ++   L+ 
Sbjct: 821 NGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQKDECLEQ 880

Query: 274 AG 275
           A 
Sbjct: 881 AA 882


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 106/458 (23%), Positives = 204/458 (44%), Gaps = 11/458 (2%)

Query: 101 ETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIV 160
           +    I   +   GC+    ++   +  +         L+ F +M      P      ++
Sbjct: 256 DAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVI 315

Query: 161 MDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
           +  L ++GR    + + KE       PN  ++ + +C+LC+ ++  + K ++  M+ KG 
Sbjct: 316 IFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGL 375

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
            P+V  +  L++ +CK G  A A ++L LM +   S +   +  LI GF R + +  A  
Sbjct: 376 IPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMS 435

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           L  KM++    PNVVTY  LI G  +      A+  L ++   G  PD   ++V ID L 
Sbjct: 436 LLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLC 495

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLVCGLEVEADL 392
           K G  ++A  +++ L E  +  +   + +L+   C  G+ S    LL K++    V  + 
Sbjct: 496 KRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCV-PNS 554

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           + YN+L+  +CK     +A  L + M+ +   P   ++  L+  L    + D+A +++  
Sbjct: 555 ITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQ 614

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           ++      +  ++TA +      GR   A  L  +   +    D + YT+ I      G 
Sbjct: 615 MLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGS 674

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVML--LSFCKERNI 548
            + A+ +  +M  +   P+ YTY  ++  LS  K + +
Sbjct: 675 IDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEV 712



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 131/568 (23%), Positives = 243/568 (42%), Gaps = 28/568 (4%)

Query: 45  PIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVR 104
           P I   HI     LN      AL+FF W  ++  + H+VQS   M++++    G      
Sbjct: 73  PSIAPSHISALFALNLDPQ-TALAFFNWIGQKHGFKHNVQSHVSMLNILVP-NGYLR--- 127

Query: 105 GIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGR----FGFTPNTFARNIV 160
             + E  R+          L ++     E    VLE    M R    F F       N++
Sbjct: 128 --IAENMRI----------LMIKSTDSSENALFVLEMLRSMNRRVDAFKFKLTLRCYNML 175

Query: 161 MDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
           + +L +   +D    + +++L +   PN  + N  +   CKL +V   +  +  +V+ G 
Sbjct: 176 LMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGL 235

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
             +   +  L+  +C+   +  A  +   M   G   +  ++T LI GF   RR+D A  
Sbjct: 236 SLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALK 295

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           L+ +M ++ C P V TYT +I    +    + A +    +  +   P++  + VLI  L 
Sbjct: 296 LFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLC 355

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLV 393
           +  ++DDA  + +G+LE  L+P   T+ +L+   C  G  +   +++  +E      +  
Sbjct: 356 EDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNAR 415

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            YN L+  FC+    ++A+ L + ML++   P+  ++  L+ G C    +  A  +   +
Sbjct: 416 TYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLM 475

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
             +    +   ++  +D L + G   +A  LF     +    + V Y+  I G  + G+ 
Sbjct: 476 NESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKV 535

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
            +   L  +M      PN+ TY  ++  +CKE+N K  + L+  +I   IE    T   L
Sbjct: 536 SDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTIL 595

Query: 574 TKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
              + K      A +   +M + G  PD
Sbjct: 596 IDNLLKDDEFDQAHDMFDQMLSTGSHPD 623



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 103/453 (22%), Positives = 196/453 (43%), Gaps = 15/453 (3%)

Query: 100 FETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNI 159
           F+  + I+  +   G +    T+   +  Y +  +    LE    M     +PN    N 
Sbjct: 360 FDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNE 419

Query: 160 VMDVLFKIGR-----VDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
           ++ + F  G+     + L  K+L+    PN +++NI +   CK  D+ +   ++ +M   
Sbjct: 420 LI-LGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNES 478

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           G  P+   + + ++  CK G + EA  L   +   G   +   ++ LIDG+ ++ ++   
Sbjct: 479 GLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDG 538

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
            +L +KM+  GC PN +TY SLI G+ + K F  A   +D++      P    + +LID 
Sbjct: 539 RFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDN 598

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---D 391
           L K   +D A D++D +L     PD + + + +   C  GR      L+C +  +    D
Sbjct: 599 LLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPD 658

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
            ++Y   +  + + G  + A  +   M + G  P  Y++  L++ L  A+  + + +   
Sbjct: 659 TMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSEL 718

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
             + +  A N   +     R ++       + LF +        +  +Y   I GL + G
Sbjct: 719 SDLSSGVASNDFSNCW---RRVDY---EFTLDLFGKMAEHGCAPNANTYGKFITGLCKVG 772

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
             E A+ L+  MK     PN   Y  +L   C+
Sbjct: 773 CLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQ 805



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 98/435 (22%), Positives = 181/435 (41%), Gaps = 38/435 (8%)

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLG---IKVLKETQL-PNFLSFNIALCNLCKLND 200
           M   G  P+ +  ++ +D L K G V+      + LKE  +  N + ++  +   CK+  
Sbjct: 475 MNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGK 534

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
           VS+ + ++  M+  G  PN   +  L++ +CK     EA  L+ +MI      + + +T+
Sbjct: 535 VSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTI 594

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           LID   +    D A  ++++M+  G  P+V  YT+ I  +        A   +  + ++G
Sbjct: 595 LIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKG 654

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC--------- 371
             PD + + + ID   + GS D A  +   + E+   P  YT+  L+  +          
Sbjct: 655 IMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSS 714

Query: 372 -----------LSGRFSLLPKLVCGLEVEADLV-------------VYNALLSYFCKAGF 407
                       S  FS   + V   E   DL               Y   ++  CK G 
Sbjct: 715 SSELSDLSSGVASNDFSNCWRRV-DYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGC 773

Query: 408 PNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTA 467
              A +L++ M +KG +P+   +  LL   C      EAI     ++ N    +      
Sbjct: 774 LEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKL 833

Query: 468 IVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIA 527
           ++  L + G   KA ++F   +  +Y  D + + V I GLL+ G +++   L+  M+   
Sbjct: 834 LLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQG 893

Query: 528 VPPNAYTYRVMLLSF 542
              +  TY +++  F
Sbjct: 894 CQIHPKTYSMLIEGF 908



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/385 (20%), Positives = 152/385 (39%), Gaps = 40/385 (10%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G+    R ++ ++   GCV  + T+   +  Y + + +       D M +    P     
Sbjct: 533 GKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTY 592

Query: 158 NIVMDVLFKIGRVDLG----IKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
            I++D L K    D       ++L     P+   +   +   C    + + + +I  M  
Sbjct: 593 TILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNA 652

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRL----- 268
           KG  P+  ++ + ++ + + G I  A+ +L  M  +G   S   ++ LI           
Sbjct: 653 KGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEV 712

Query: 269 ----------------------RRLDMAGYL--WEKMVQNGCSPNVVTYTSLIKGFMEAK 304
                                 RR+D    L  + KM ++GC+PN  TY   I G  +  
Sbjct: 713 SSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVG 772

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
              +A    D ++ +G +P+   +N L+ C  ++G Y +A+   D ++E + +P   +  
Sbjct: 773 CLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCK 832

Query: 365 SLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
            LL  +   G      ++ C     E   D +V+  L+    K G  ++   L+  M  +
Sbjct: 833 LLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQ 892

Query: 422 G--FTPDNYSFVGLLRGLCGARKID 444
           G    P  YS   L+ G  G ++ID
Sbjct: 893 GCQIHPKTYSM--LIEGFDGIQEID 915


>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 827

 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 129/520 (24%), Positives = 218/520 (41%), Gaps = 15/520 (2%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWR--GEMYGMVLEA--FDEMGRFGFTP 152
             R E VR +  EL   G      T+ + +  Y    G   GM   A    ++ R G  P
Sbjct: 295 ANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRSGEKP 354

Query: 153 NTFARNIVMDVLFKIGRVDLG---IKVLKETQLP-NFLSFNIALCNLCKLNDVSNVKDVI 208
                +  +  L K+G V+     I+ L  T  P N  SFN  +   CK  +V     V+
Sbjct: 355 TVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVL 414

Query: 209 GMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRL 268
             M   G  P+V  + IL+N FC  G + +   L+  M       S+ ++T LI G  + 
Sbjct: 415 EEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKK 474

Query: 269 RRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF-MEAKMFSIAFSFLDMLESEGHAPDLVF 327
             L  A  ++  +  + C  +   Y +LI GF M+  M S A   L+ +      P    
Sbjct: 475 NMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDS-AIKLLEEMICNELVPTAFS 533

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE 387
              LI    K+G +D AL+V++ +L   + PD+     +L   C +G F     L+   +
Sbjct: 534 CRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQ 593

Query: 388 VEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
                 +   YNA++   CK G+P +A++L   ML +   P   ++  L+ G        
Sbjct: 594 EHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFK 653

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
            A+N++  +V      N   +T ++     + + H+A  +F+        LD +SYT  I
Sbjct: 654 RAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLI 713

Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
            G       ++A+ L+ +M      PN  TY  ++  FCK   I +   +   +    + 
Sbjct: 714 VGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSVI 773

Query: 565 LDYHTSIRLTKFIFKFHSSSSAVNQLVE-MCNLGLIPDEM 603
            D  T   L  +  K H      ++L + M + G++PD++
Sbjct: 774 PDVVTYTVLIDWYHK-HGYFDQAHKLYDVMKDKGVLPDDI 812



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/418 (23%), Positives = 197/418 (47%), Gaps = 10/418 (2%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFL 186
           RGE++   L+  +EM   G  P+ ++ +I+++     G V   + +++E +     P+ +
Sbjct: 404 RGEVFE-ALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIV 462

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           S+   +  LCK N + N  D+   +       +  ++E L++ FC  G +  A +LL  M
Sbjct: 463 SYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEM 522

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
           I      +  +   LI G+ +L   D A  ++  M+++G  P+ +    ++ G   A  F
Sbjct: 523 ICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYF 582

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
             A + L+  +  G   +   +N +I  L K G  + AL++   +L+  ++P    + +L
Sbjct: 583 KEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTL 642

Query: 367 LSTVCLSGRF----SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
           +S       F    +L  ++V  + +  ++  Y  L+S F  +   ++A  ++  M ++G
Sbjct: 643 ISGFAKQSNFKRAVNLFTRMV-KVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERG 701

Query: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI 482
              D  S+  L+ G C  R++ +A  +++ +     + N   +T I+D   ++ R   A 
Sbjct: 702 LCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLAT 761

Query: 483 QLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
            +F +   +    DVV+YTV I    + G  ++A+ LY  MK   V P+  T+ V+ L
Sbjct: 762 WVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKGVLPDDITHNVLGL 819



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 105/490 (21%), Positives = 199/490 (40%), Gaps = 56/490 (11%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCF------------ 230
           P+  + N  L  L + N V  V+ V   +  +G  PN+  + I++N +            
Sbjct: 280 PDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQ 339

Query: 231 ---------------------------CKMGRIAEAYQLLGLMITLGTSLSVNAWTVLID 263
                                      CK+G +  A  L+  +      L+ +++  +I 
Sbjct: 340 AAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIY 399

Query: 264 GFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP 323
           GF +   +  A  + E+M  +G  P+V +Y+ LI  F            ++ +E     P
Sbjct: 400 GFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKP 459

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LL 379
            +V +  LI  L K     +A+D++  +       DS  + +L+   C+ G       LL
Sbjct: 460 SIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLL 519

Query: 380 PKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
            +++C   V       + +  Y+ K G  +QA++++N ML  G  PD  +   +L G C 
Sbjct: 520 EEMICNELVPTAFSCRSLIRGYY-KLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCR 578

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
           A    EA+ + +    +   +N H + AI+ +L + G   +A++L  R +       VV+
Sbjct: 579 AGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVN 638

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           Y+  I G  +    + A  L+++M  + +  N  TY +++  F     +     + +++ 
Sbjct: 639 YSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMK 698

Query: 560 DARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTPVS 619
           +  + LD    I  T  I  F ++        EM     + +EM R+    S   +T   
Sbjct: 699 ERGLCLD---QISYTTLIVGFCNNR-------EMKKAWALFEEMSRE--GCSPNVITYTC 746

Query: 620 LFDGFVPCER 629
           + DGF    R
Sbjct: 747 IIDGFCKSNR 756



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 95/445 (21%), Positives = 168/445 (37%), Gaps = 42/445 (9%)

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
           + N  DV       G  P++R    LL C  +  R+    ++   +   G S ++  +T+
Sbjct: 263 LENALDVFSNAKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTI 322

Query: 261 LIDGFRRLRRLD----MAGYLWEKMVQNGCSPNVVTYTSLIKGF-----MEAKMFSI--- 308
           +++ +      D     A  +  K+ ++G  P VVTY++ I G      +EA +  I   
Sbjct: 323 MMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNL 382

Query: 309 ---------------------------AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
                                      A   L+ ++S G  PD+  +++LI+     G  
Sbjct: 383 HYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDV 442

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNAL 398
              LD+ + +   ++ P   ++ SL+  +C          +   +   +   D  VY  L
Sbjct: 443 MKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETL 502

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           +  FC  G  + A+KL   M+     P  +S   L+RG       D+A+ V+  ++ +  
Sbjct: 503 IDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGI 562

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
             +      I+D    AG   +A+ L        + L+  SY   I  L + G  E A  
Sbjct: 563 WPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALE 622

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
           L  +M    V P+   Y  ++  F K+ N K    L   ++   I  +  T   L     
Sbjct: 623 LLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFS 682

Query: 579 KFHSSSSAVNQLVEMCNLGLIPDEM 603
             H    A     EM   GL  D++
Sbjct: 683 HSHKMHEAYGIFKEMKERGLCLDQI 707



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/356 (21%), Positives = 147/356 (41%), Gaps = 9/356 (2%)

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
           +F++L++ F     +  A  +      +G    +     L+       R++    ++E++
Sbjct: 249 VFDVLISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVFEEL 308

Query: 282 VQNGCSPNVVTYTSLIKGF-----MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
              G SPN+ TYT ++  +      +A M   A   L  +   G  P +V ++  I  L 
Sbjct: 309 KDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAV-ILGKIYRSGEKPTVVTYSTYIHGLC 367

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-FSLLPKL--VCGLEVEADLV 393
           K+G+ + AL +   L       +S++F  ++   C  G  F  L  L  +    +  D+ 
Sbjct: 368 KVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVY 427

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            Y+ L++ FC  G   + + L   M      P   S+  L+ GLC    +  A++++  I
Sbjct: 428 SYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSI 487

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
             ++   ++ V+  ++D     G    AI+L    I  +      S    IRG  + G  
Sbjct: 488 GASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLF 547

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
           ++A  +++ M    + P+      +L   C+    K    LL+D  +    L+ H+
Sbjct: 548 DQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHS 603



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 64/346 (18%), Positives = 127/346 (36%), Gaps = 50/346 (14%)

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           GF  ++  F I+++ F   G   E + LL  ++        + + +        + ++ +
Sbjct: 187 GFSHSISCFRIIVHAFALAGMRLEVWALLRDIVGFCNEAKYDTFELFSAFLDSPQHVERS 246

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
           G               V +  LI  F    M   A       +  G  PD+   N L+ C
Sbjct: 247 G---------------VVFDVLISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLKC 291

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVV 394
           L +    +    V++ L +    P+ YT+  +++  C                  +D+  
Sbjct: 292 LVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYC------------------SDVG- 332

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
                   C AG   QA  +   +   G  P   ++   + GLC    ++ A+ + + + 
Sbjct: 333 --------CDAGM-RQAAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLH 383

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
             N  +N+H    ++    + G   +A+Q+           DV SY++ I      G   
Sbjct: 384 YTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVM 443

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
           +   L  +M+H  + P+  +Y  ++   CK       K +LQ+ +D
Sbjct: 444 KCLDLMEEMEHSQIKPSIVSYTSLIHGLCK-------KNMLQNAVD 482



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 92/199 (46%), Gaps = 7/199 (3%)

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
            VE   VV++ L+S F        A+ +++     G  PD  +   LL+ L  A +++  
Sbjct: 242 HVERSGVVFDVLISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLKCLVEANRVEFV 301

Query: 447 INVYQGIVMNNPAVNAHVHTAIV-----DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYT 501
             V++ +    P+ N + +T ++     D   +AG    A+ L +     + P  VV+Y+
Sbjct: 302 RRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPT-VVTYS 360

Query: 502 VAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
             I GL + G  E A +L   + +   P N++++  ++  FCK   +    ++L+++  +
Sbjct: 361 TYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSS 420

Query: 562 RIELD-YHTSIRLTKFIFK 579
            I  D Y  SI +  F  K
Sbjct: 421 GILPDVYSYSILINAFCGK 439


>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
 gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
          Length = 859

 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 118/505 (23%), Positives = 234/505 (46%), Gaps = 51/505 (10%)

Query: 106 IVGELARVGCV--IKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDV 163
           +  E++R+G V  +++ +FLL  ++  +GE    V+  FD++   G  P+ +  +IV++ 
Sbjct: 178 VFDEMSRIGRVPGLRSCSFLLG-KLVQKGEGRVAVM-VFDQIVGTGIVPDVYMCSIVVNA 235

Query: 164 LFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN 219
             ++GRVD+ ++VL    KE   PN +++N  +       D   V+ V+ +M  +G   N
Sbjct: 236 HCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRN 295

Query: 220 V------------------------------------RMFEILLNCFCKMGRIAEAYQLL 243
           V                                    R++ +L++ +C+MGR+ +A ++ 
Sbjct: 296 VVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIR 355

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
             M+ +G  +++     LI G+ +L ++  A  ++  MV     P+  +Y +L+ G+   
Sbjct: 356 DEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCRE 415

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
              S AF   + +  +G  P +V +N +I  L  +GSYDDAL ++  ++E  + P+  + 
Sbjct: 416 GKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISC 475

Query: 364 CSLLS---TVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
           C++L     +  S R  +L K + G       V +N ++S  CK G   +A  +++ M +
Sbjct: 476 CTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKE 535

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV--HTAIVDRLIEAGRC 478
            G +PD  ++  L  G C    + EA  +    VM   A++A +  + +++D L +  + 
Sbjct: 536 LGLSPDEITYRTLSDGYCKNGNVQEAFQIKG--VMERQAMSASIEMYNSLIDGLFKIRKL 593

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
           +    L           +VV+Y   I G  +  + ++A+ LY +M      PN      +
Sbjct: 594 NDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKI 653

Query: 539 LLSFCKERNIKMVKRLLQDVIDARI 563
           + S  ++  I     +L  ++D  I
Sbjct: 654 VSSLYRDDRISEATVILDKMLDFDI 678



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 131/546 (23%), Positives = 244/546 (44%), Gaps = 30/546 (5%)

Query: 67  LSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFL 126
           LSFF    +   Y     S+  ++ ++T     F     ++ +L  + C    + + +  
Sbjct: 85  LSFFHLATQNSHYRPHSLSYSILLHILTH-ARLFPEATTVLRQLMDLHCTNNYRAYAVCN 143

Query: 127 RIYWRGEMYGMVLEAFDE-MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF 185
            ++   + +G     FD  M  F     T     V D + +IGRV            P  
Sbjct: 144 HVFSVYKEFGFCSGVFDMLMKAFAERGMTKHALYVFDEMSRIGRV------------PGL 191

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGL 245
            S +  L  L +  +      V   +V  G  P+V M  I++N  C++GR+  A ++L  
Sbjct: 192 RSCSFLLGKLVQKGEGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEK 251

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGY--LWEKMVQNGCSPNVVTYTSLIKGFMEA 303
           M+  G   +V  +  L++G+  + R D  G   +   M + G S NVVT T L++G+ + 
Sbjct: 252 MVKEGLEPNVVTYNGLVNGY--VGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKK 309

Query: 304 KMFSIAFSFL-DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
                A   L ++ E E    D   + VL+D   +MG  +DA+ + D +L + L  +   
Sbjct: 310 GKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVI 369

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
             +L+   C  G+     ++  G+    ++ D   YN LL  +C+ G  ++A  L   ML
Sbjct: 370 CNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEML 429

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
             G TP   ++  +++GL      D+A++++  +V      N      ++D   + G   
Sbjct: 430 GDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSD 489

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
           +A+ L++  +   +    V++   I GL + G+  EA  ++ +MK + + P+  TYR + 
Sbjct: 490 RAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLS 549

Query: 540 LSFCKERNIK---MVKRLLQ-DVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCN 595
             +CK  N++    +K +++   + A IE+ Y++   L   +FK    +   + LVEM  
Sbjct: 550 DGYCKNGNVQEAFQIKGVMERQAMSASIEM-YNS---LIDGLFKIRKLNDVTDLLVEMQT 605

Query: 596 LGLIPD 601
            GL P+
Sbjct: 606 RGLSPN 611



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 104/441 (23%), Positives = 197/441 (44%), Gaps = 52/441 (11%)

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF----LSFNI 190
           Y   L  +  M   G TPN  +   ++D  FK+G  D  + + KE     F    ++FN 
Sbjct: 453 YDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNT 512

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +  LCK+  +     V   M   G  P+   +  L + +CK G + EA+Q+ G+M    
Sbjct: 513 MISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQA 572

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
            S S+  +  LIDG  ++R+L+    L  +M   G SPNVVTY +LI G+ + +    AF
Sbjct: 573 MSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAF 632

Query: 311 S-FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
             + +M+E  G  P++V  + ++  L +     +A  + D +L+  ++   +  C   S 
Sbjct: 633 HLYFEMIE-RGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILA-VHNKC---SD 687

Query: 370 VCLSGRFSLLPKLVCGLEVEADL-------VVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
             +    +L  + +     ++D+       +VYN  +   CK+G  ++A  + + ++ +G
Sbjct: 688 KLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRG 747

Query: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI 482
           F PDN+++  L+     +  +DEA  +   ++      N  ++ A+++ L + G   +A 
Sbjct: 748 FLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQ 807

Query: 483 QLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
           +LF                               Y LY +     + PNA TY +++  +
Sbjct: 808 RLF-------------------------------YKLYQK----GLVPNAVTYNILIGCY 832

Query: 543 CKERNIKMVKRLLQDVIDARI 563
           C+  ++    RL + + +  I
Sbjct: 833 CRIGDLDKASRLREKMTEEGI 853



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 81/334 (24%), Positives = 141/334 (42%), Gaps = 45/334 (13%)

Query: 136 GMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVD--LGIKVLKETQL--PNFLSF 188
           G ++EA   FD M   G +P+      + D   K G V     IK + E Q    +   +
Sbjct: 521 GKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMY 580

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           N  +  L K+  +++V D++  M  +G  PNV  +  L++ +C   ++ +A+ L   MI 
Sbjct: 581 NSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIE 640

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM-------VQNGCS-------------- 287
            G + +V   + ++    R  R+  A  + +KM       V N CS              
Sbjct: 641 RGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQK 700

Query: 288 --------------PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
                          N + Y   I G  ++     A S L +L S G  PD   +  LI 
Sbjct: 701 IADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIH 760

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA--- 390
             S  G+ D+A  + D +LE  L+P+   + +L++ +C  G      +L   L  +    
Sbjct: 761 ACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVP 820

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
           + V YN L+  +C+ G  ++A +L   M ++G +
Sbjct: 821 NAVTYNILIGCYCRIGDLDKASRLREKMTEEGIS 854



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/316 (22%), Positives = 141/316 (44%), Gaps = 6/316 (1%)

Query: 293 YTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
           +  L+K F E  M   A    D +   G  P L   + L+  L + G    A+ V+D ++
Sbjct: 159 FDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQIV 218

Query: 353 ELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFP 408
              +VPD Y    +++  C  GR      +L K+V    +E ++V YN L++ +   G  
Sbjct: 219 GTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMV-KEGLEPNVVTYNGLVNGYVGRGDF 277

Query: 409 NQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP-AVNAHVHTA 467
               ++   M ++G + +  +   L+RG C   K+DEA  + + +  +    V+  V+  
Sbjct: 278 EGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGV 337

Query: 468 IVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIA 527
           +VD   + GR   A+++    +     +++V     I+G  + G+  EA  ++  M    
Sbjct: 338 LVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWN 397

Query: 528 VPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAV 587
           + P+ Y+Y  +L  +C+E  +     L ++++   I     T   + K +    S   A+
Sbjct: 398 LKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDAL 457

Query: 588 NQLVEMCNLGLIPDEM 603
           +    M   G+ P+E+
Sbjct: 458 HLWHLMVERGVTPNEI 473



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 66/143 (46%), Gaps = 4/143 (2%)

Query: 153 NTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVS-NVKDVIGM- 210
           N    NI +D L K G++D    VL       FL  N   C L     VS NV +   + 
Sbjct: 716 NNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLR 775

Query: 211 --MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRL 268
             M+ KG  PN+ ++  L+N  CK+G I  A +L   +   G   +   + +LI  + R+
Sbjct: 776 DEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRI 835

Query: 269 RRLDMAGYLWEKMVQNGCSPNVV 291
             LD A  L EKM + G S  ++
Sbjct: 836 GDLDKASRLREKMTEEGISTRII 858


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 117/517 (22%), Positives = 229/517 (44%), Gaps = 47/517 (9%)

Query: 85  SFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFL-RIYWRGEMYGMVLEAFD 143
           +FD    V+  + G     R ++ +L   G V+   +   FL RI    E   M ++ F 
Sbjct: 192 AFDIFFQVLVEI-GHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFC 250

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE----TQLPNFLSFNIALCNLCKLN 199
           E   +G + NT + NI++  L ++G+V    ++L +    +  P+ +S++  +   C L 
Sbjct: 251 E---YGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLG 307

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT----------- 248
           ++     ++  M  KG  PN   +  ++   CK+G+  EA ++L  M++           
Sbjct: 308 ELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYT 367

Query: 249 --------LGTSLSVNAW----------------TVLIDGFRRLRRLDMAGYLWEKMVQN 284
                   LG   + N W                T LI GF +  ++     L+ +M+  
Sbjct: 368 TLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISR 427

Query: 285 GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
           G  P+ VTYT+LI  + +A     AFS  + +   G  P++V +  LID L K G  D A
Sbjct: 428 GLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTA 487

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV---EADLVVYNALLSY 401
            ++ D + +  L  +   + S+++ +C +G      KL+  +EV   + D + Y  ++  
Sbjct: 488 NELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDA 547

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVN 461
           +C+ G  ++A KL   MLD+G  P   +F  L+ G C    +++   +   ++      +
Sbjct: 548 YCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPD 607

Query: 462 AHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYS 521
           A  +  ++ +       +   ++++R   +    D  +Y + I+G  +    +EA+ LY 
Sbjct: 608 AITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYK 667

Query: 522 QMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           +M      P   +Y  ++  F K+R     + L +++
Sbjct: 668 EMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEM 704



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 121/458 (26%), Positives = 210/458 (45%), Gaps = 11/458 (2%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCN--LCKL-NDVSNVKDVI 208
           PN  A +I   VL +IG +    K+L +  L   L   +  CN  L ++ N+   ++  I
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLL-DKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAI 246

Query: 209 GMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRL 268
            +    G   N   + I++   C++G++ EA++LL  M    ++  V +++ +IDG+  L
Sbjct: 247 KVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHL 306

Query: 269 RRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH 328
             L  A  L + M   G  PN  TY S+I    +      A   L  + S+   PD V +
Sbjct: 307 GELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVY 366

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF----SLLPKLVC 384
             LI    K+G    A   +D +L  K+ PD  T+ +L+      G+     +L  +++ 
Sbjct: 367 TTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMIS 426

Query: 385 -GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
            GL+   D V Y  L+  +CKAG    A  L+N M+  G TP+  ++  L+ GLC   ++
Sbjct: 427 RGLK--PDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGEL 484

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           D A  +   +      +N  ++ ++V+ + +AG   +AI+L +   V     D ++YT  
Sbjct: 485 DTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTV 544

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           I      G  ++A+ L  +M    + P   T+ V++  FC    ++   RLL  +++  I
Sbjct: 545 IDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGI 604

Query: 564 ELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
             D  T   L K     +S ++       M N G+ PD
Sbjct: 605 VPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPD 642



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 97/430 (22%), Positives = 193/430 (44%), Gaps = 7/430 (1%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALC 193
            L+  D+M   G  PN +  N ++ +L KIG+     KVL+E      +P+ + +   + 
Sbjct: 312 ALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIH 371

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
              KL  V         M+ K   P+   +  L+  F + G++ E   L   MI+ G   
Sbjct: 372 GFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKP 431

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
               +T LID + +   +  A  L  +MVQ G +PN+VTY +LI G  +      A   L
Sbjct: 432 DEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELL 491

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           D +  +G   ++  +N +++ + K G+ + A+ +   +    + PD+ T+ +++   C  
Sbjct: 492 DEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRL 551

Query: 374 GRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           G      KL+  +    ++  +V +N L++ FC  G      +L   ML+KG  PD  ++
Sbjct: 552 GDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITY 611

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             L++  C    ++    +Y+ +     A +++ +  ++    +A    +A  L++  I 
Sbjct: 612 NTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIE 671

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
           + Y   V SY   I+   +  +  EA  L+ +M+   +  +   Y   +    +E ++++
Sbjct: 672 KGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEI 731

Query: 551 VKRLLQDVID 560
              L  + I+
Sbjct: 732 TLNLCDEAIE 741



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 88/361 (24%), Positives = 149/361 (41%), Gaps = 39/361 (10%)

Query: 136 GMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSF 188
           G V+E    F EM   G  P+      ++DV  K G +     L  ++++    PN +++
Sbjct: 412 GKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTY 471

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
              +  LCK  ++    +++  M +KG   NV ++  ++N  CK G I +A +L+  M  
Sbjct: 472 GALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEV 531

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
            G       +T +ID + RL  +D A  L ++M+  G  P VVT+  L+ GF    M   
Sbjct: 532 AGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLED 591

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
               L  +  +G  PD + +N L+       S +    +Y  +    + PDS T      
Sbjct: 592 GDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNT------ 645

Query: 369 TVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
                                     YN L+   CKA    +A  LY  M++KG+ P   
Sbjct: 646 --------------------------YNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVT 679

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
           S+  L++     RK  EA  +++ +  +    +  ++   VD   E G     + L   A
Sbjct: 680 SYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEA 739

Query: 489 I 489
           I
Sbjct: 740 I 740



 Score = 39.7 bits (91), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 26/108 (24%), Positives = 50/108 (46%)

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
           +  SY + I  L   G+ +EA+ L  QM   +  P+  +Y  ++  +C    +K   +L+
Sbjct: 257 NTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLM 316

Query: 556 QDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
            D+    ++ + +T   +   + K   S  A   L EM +  +IPD +
Sbjct: 317 DDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNV 364


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 111/477 (23%), Positives = 217/477 (45%), Gaps = 11/477 (2%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           K++    ++ +F+ ++S + ++  + +  R ++ E+   G +    T+ +      R + 
Sbjct: 273 KEKSVAPNIITFNSLLSGLCKMR-KMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDD 331

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLS----FNI 190
               +E +++    G   N +  +I+++ L K G+V+   ++LK+      ++    +N 
Sbjct: 332 GNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNT 391

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +   C++ D++     I  M   G  PN   F  L++ FC M  + +A + +  M   G
Sbjct: 392 FVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKG 451

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF-MEAKMFSIA 309
            + SV  +  LIDG+ +L   D    + E+M + G  PNVV+Y SLI     + K+    
Sbjct: 452 VTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAE 511

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
               DM+   G  P+   +N+LID    +G   DAL  +D ++  ++ P   T+  L+  
Sbjct: 512 IVLRDMI-CRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDG 570

Query: 370 VCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
           +C  G+ +     +  +       D++ YN+L+S +  AG  ++ + LY TM + G  P 
Sbjct: 571 LCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPT 630

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
             ++  L+ G C    I+    +Y  ++  N   +  V+ A++    E G   KA  L +
Sbjct: 631 VRTYHPLISG-CSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQ 689

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
             + +    D ++Y   I G    G+      L + MK   + P A TY +++   C
Sbjct: 690 GMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHC 746



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 110/434 (25%), Positives = 194/434 (44%), Gaps = 10/434 (2%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWR-GEMYGMVLEAFDEMGRFGFTPNTFA 156
           G+ E    I+ +    G V     +  F+  Y R G+M   +L   + M  FG  PN+  
Sbjct: 365 GKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAIL-TIERMESFGLRPNSIT 423

Query: 157 RNIVMDVLFKIGRVDLG---IKVLKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N ++D    +  +D     +K + E  + P+  ++N  +    KL        ++  M 
Sbjct: 424 FNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQME 483

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
             G  PNV  +  L+NC CK G+I EA  +L  MI  G   +   + +LIDG   + ++ 
Sbjct: 484 EIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVK 543

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A   +++M+++  SP +VTY  LI G  +    + A  FL  + S GH+PD++ +N LI
Sbjct: 544 DALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLI 603

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVE 389
              +  G+    L +Y+ +  L + P   T+  L+S  C      L+ KL   +  + + 
Sbjct: 604 SGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISG-CSKEGIELVEKLYNEMLQMNLL 662

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            D VVYNA++  + + G   +A  L+  MLD+G  PD  ++  L+ G     K+    ++
Sbjct: 663 PDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDL 722

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
              +     A  A  +  +V    +      A   +R  +   +  +         GL +
Sbjct: 723 VNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQ 782

Query: 510 GGRTEEAYILYSQM 523
            GR +E  ++ S+M
Sbjct: 783 EGRLQEVQVICSEM 796



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 108/501 (21%), Positives = 213/501 (42%), Gaps = 72/501 (14%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV---LKETQL-PNFLSFNIALCNLCK 197
           FDEM       +    N ++D   K+G +D   K+   +KE  + PN ++FN  L  LCK
Sbjct: 234 FDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCK 293

Query: 198 LNDVSNVKDVIGMMVRKGFYPN--------------------VRMFE------------- 224
           +  +   + ++  M   GF P+                    + ++E             
Sbjct: 294 MRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYT 353

Query: 225 --ILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
             ILLN  CK G++ +A ++L      G       +   ++G+ R+  ++ A    E+M 
Sbjct: 354 GSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERME 413

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
             G  PN +T+ SLI  F + K    A  ++  +  +G  P +  +N LID   K+ ++D
Sbjct: 414 SFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFD 473

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYF 402
               + + + E+ + P+  ++ SL++ +C  G+            +EA++V+ + +    
Sbjct: 474 RCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKI-----------LEAEIVLRDMI---- 518

Query: 403 CKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNA 462
           C+   PN  V  YN ++D               G C   K+ +A+  +  ++ +  +   
Sbjct: 519 CRGVLPNAQV--YNMLID---------------GSCMVGKVKDALRFFDEMMRSEISPTL 561

Query: 463 HVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQ 522
             +  ++D L + G+  +A     +     +  DV++Y   I G    G   +   LY  
Sbjct: 562 VTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYET 621

Query: 523 MKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHS 582
           MK++ + P   TY   L+S C +  I++V++L  +++   +  D      +     +  +
Sbjct: 622 MKNLGIKPTVRTYHP-LISGCSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGN 680

Query: 583 SSSAVNQLVEMCNLGLIPDEM 603
           +  A +    M + G+ PD+M
Sbjct: 681 TQKAYSLHQGMLDQGIHPDKM 701



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 104/426 (24%), Positives = 194/426 (45%), Gaps = 16/426 (3%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKI----GRVDLGIKVLKETQLPNFLSFNIALCNLCKLN 199
           EM   GF P+ +  +I+ D L +     G ++L  +  ++    N  + +I L  LCK  
Sbjct: 306 EMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQG 365

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
            V   ++++      G   +  ++   +N +C++G + +A   +  M + G   +   + 
Sbjct: 366 KVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFN 425

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
            LID F  ++ +D A    +KM + G +P+V TY +LI G+ +   F   F  L+ +E  
Sbjct: 426 SLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEI 485

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
           G  P++V +  LI+CL K G   +A  V   ++   ++P++  +  L+   C+ G+    
Sbjct: 486 GVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDA 545

Query: 380 PKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
            +    +   E+   LV YN L+   CK G   +A      +   G +PD  ++  L+ G
Sbjct: 546 LRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISG 605

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL- 495
              A  + + + +Y+   M N  +   V T     LI +G   + I+L  +   E   + 
Sbjct: 606 YANAGNVSKCLGLYE--TMKNLGIKPTVRT--YHPLI-SGCSKEGIELVEKLYNEMLQMN 660

Query: 496 ---DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVK 552
              D V Y   I    E G T++AY L+  M    + P+  TY  ++L   +E  +  +K
Sbjct: 661 LLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIK 720

Query: 553 RLLQDV 558
            L+ ++
Sbjct: 721 DLVNNM 726



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 98/411 (23%), Positives = 191/411 (46%), Gaps = 9/411 (2%)

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
           KL ++    + +  M ++G  PNV ++ +L+   C+  RI +A ++   M  +    S+ 
Sbjct: 188 KLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIV 247

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
            +  LIDG+ ++  LD A  + E+M +   +PN++T+ SL+ G  + +    A S L  +
Sbjct: 248 TYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEM 307

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
           E  G  PD   +++L D L +    + A+++Y+   E  +  ++YT   LL+ +C  G+ 
Sbjct: 308 EVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKV 367

Query: 377 SLLPKLVCGLEVE---ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
               +++         AD V+YN  ++ +C+ G  N+A+     M   G  P++ +F  L
Sbjct: 368 EKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSL 427

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD---RLIEAGRCHKAIQLFRRAIV 490
           +   C  +++D+A    + +       +   +  ++D   +L    RC + ++      V
Sbjct: 428 IDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGV 487

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
           +    +VVSY   I  L + G+  EA I+   M    V PNA  Y +++   C    +K 
Sbjct: 488 KP---NVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKD 544

Query: 551 VKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
             R   +++ + I     T   L   + K    + A + L ++ + G  PD
Sbjct: 545 ALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPD 595



 Score = 42.4 bits (98), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 37/202 (18%), Positives = 73/202 (36%), Gaps = 35/202 (17%)

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTML-------------------------------- 419
           + + + LLS  CK+    +AV+LY  M                                 
Sbjct: 106 ITLSDMLLSVCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFM 165

Query: 420 ---DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
              + GF  D + +   ++     + +   +     +       N  ++  ++  L    
Sbjct: 166 EIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREK 225

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
           R   A ++F           +V+Y   I G  + G  + A+ +  +MK  +V PN  T+ 
Sbjct: 226 RIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFN 285

Query: 537 VMLLSFCKERNIKMVKRLLQDV 558
            +L   CK R +K  + LL+++
Sbjct: 286 SLLSGLCKMRKMKEARSLLKEM 307


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 112/471 (23%), Positives = 210/471 (44%), Gaps = 10/471 (2%)

Query: 140 EAF-DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCN 194
           EAF  +M   G  P+ +  N ++      G+    ++V KE +    LP+ ++ N  + +
Sbjct: 276 EAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGS 335

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           LCK   +   +DV   M  KG  P+V  + I+LN +   G + +   L  LM+  G +  
Sbjct: 336 LCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPD 395

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           +  + VLI  +     LD A  ++ +M  +G  P+VVTY ++I           A    +
Sbjct: 396 IYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFN 455

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            +  +G  PD   ++ LI      GS   A ++   ++   +  D   F S+++ +C  G
Sbjct: 456 QMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLG 515

Query: 375 RF---SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
           R      +  L   + +  D VVYN L+  +C  G   +A+++++ M+  G  P+   + 
Sbjct: 516 RVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYG 575

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            L+ G C   +IDE +++++ ++      +  ++  I+D L EAGR   A   F      
Sbjct: 576 TLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTES 635

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
              ++  +Y++ +RGL +    +EA  L+ +++ + V  +  T   M+    + R ++  
Sbjct: 636 GIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEA 695

Query: 552 KRLLQDVI-DARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           K L   +     +      SI +T  + K      A +    M N G  PD
Sbjct: 696 KDLFASISRSGLVPCAVTYSIMITN-LLKEGLVEEAEDMFSSMQNAGCEPD 745



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 113/533 (21%), Positives = 221/533 (41%), Gaps = 44/533 (8%)

Query: 112 RVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGF--TPNTFARNIVMDVLFKIGR 169
            +GCV    ++ + L+        G   +    M   G   +P+  A N V+D  FK G 
Sbjct: 177 ELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGD 236

Query: 170 VDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEI 225
           V+    + KE       P+ ++++  +  LCK   +   +  +  MV KG  P+   +  
Sbjct: 237 VNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNN 296

Query: 226 LLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
           L+  +   G+  EA ++   M        V A   L+    +  ++  A  +++ M   G
Sbjct: 297 LIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKG 356

Query: 286 CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI----DC------- 334
            +P+V +YT ++ G+             D++  +G APD+   NVLI    +C       
Sbjct: 357 QNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAM 416

Query: 335 ------------------------LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
                                   L ++G  DDA++ ++ +++  +VPD Y +  L+   
Sbjct: 417 IIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGF 476

Query: 371 CLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           C  G      +L+  +    +  D+V + ++++  CK G    A  +++  ++ G  PD 
Sbjct: 477 CTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDA 536

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
             +  L+ G C   K+++A+ V+  +V      N   +  +V+   + GR  + + LFR 
Sbjct: 537 VVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFRE 596

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN 547
            + +      + Y + I GL E GRT  A + + +M    +  N  TY ++L    K R 
Sbjct: 597 MLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRC 656

Query: 548 IKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
                 L +++    +++D  T   +   +F+      A +    +   GL+P
Sbjct: 657 FDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVP 709



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 110/497 (22%), Positives = 203/497 (40%), Gaps = 49/497 (9%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALC 193
            +  F EM R    P+  A N +M  L K G++     V      + Q P+  S+ I L 
Sbjct: 310 AVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLN 369

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
                  + ++ D+  +M+  G  P++  F +L+  +   G + +A  +   M   G   
Sbjct: 370 GYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP 429

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
            V  +  +I    R+ ++D A   + +M+  G  P+   Y  LI+GF        A   +
Sbjct: 430 HVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELI 489

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
             + + G   D+VF   +I+ L K+G   DA +++D  + + L PD+  +  L+   CL 
Sbjct: 490 SEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLV 549

Query: 374 GRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN--- 427
           G+     ++   +    +E ++V Y  L++ +CK G  ++ + L+  ML KG  P     
Sbjct: 550 GKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILY 609

Query: 428 ----------------------------------YSFVGLLRGLCGARKIDEAINVYQGI 453
                                             YS V  LRGL   R  DEAI +++ +
Sbjct: 610 NIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIV--LRGLFKNRCFDEAIFLFKEL 667

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
              N  ++      ++  + +  R  +A  LF            V+Y++ I  LL+ G  
Sbjct: 668 RAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLV 727

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
           EEA  ++S M++    P++     ++    K+  I      L  + +    L++ T++ L
Sbjct: 728 EEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLL 787

Query: 574 TKFIFKFHSSSSAVNQL 590
                 F S  +   Q+
Sbjct: 788 VDL---FSSKGTCREQI 801



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 94/425 (22%), Positives = 172/425 (40%), Gaps = 41/425 (9%)

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA-GY 276
           P    + IL++C  +  R   A    G ++  G  +     + L+ GF   +R D A   
Sbjct: 111 PTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDI 170

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH--APDLVFHNVLIDC 334
           L  +  + GC P+V +Y  L+K          A   L M+   G   +PD+V +N +ID 
Sbjct: 171 LLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDG 230

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF-------------SLLP- 380
             K G  + A D++  +++  + PD  T+ S++  +C +                 +LP 
Sbjct: 231 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPD 290

Query: 381 -----KLVCGL-------------------EVEADLVVYNALLSYFCKAGFPNQAVKLYN 416
                 L+ G                     +  D+V  N L+   CK G   +A  +++
Sbjct: 291 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFD 350

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
           TM  KG  PD +S+  +L G      + +  +++  ++ +  A + +    ++      G
Sbjct: 351 TMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCG 410

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
              KA+ +F           VV+Y   I  L   G+ ++A   ++QM    V P+ Y Y 
Sbjct: 411 MLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYH 470

Query: 537 VMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNL 596
            ++  FC   ++   K L+ ++++  + LD      +   + K      A N      N+
Sbjct: 471 CLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNV 530

Query: 597 GLIPD 601
           GL PD
Sbjct: 531 GLHPD 535



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 116/259 (44%), Gaps = 6/259 (2%)

Query: 287 SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALD 346
           SP   TY  L+     A    +A +F   L   G   D +  + L+    +    D+ALD
Sbjct: 110 SPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALD 169

Query: 347 V-YDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV-----CGLEVEADLVVYNALLS 400
           +      EL  VPD +++  LL ++C  G+      L+      G     D+V YN ++ 
Sbjct: 170 ILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVID 229

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
            F K G  N+A  L+  M+ +G  PD  ++  ++  LC AR +D+A    + +V      
Sbjct: 230 GFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLP 289

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
           +   +  ++      G+  +A+++F+    +    DVV+    +  L + G+ +EA  ++
Sbjct: 290 DNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVF 349

Query: 521 SQMKHIAVPPNAYTYRVML 539
             M      P+ ++Y +ML
Sbjct: 350 DTMAMKGQNPDVFSYTIML 368



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/232 (20%), Positives = 104/232 (44%), Gaps = 7/232 (3%)

Query: 136 GMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSF 188
           G V++A   FD     G  P+    N++MD    +G+++  ++V          PN + +
Sbjct: 515 GRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGY 574

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
              +   CK+  +     +   M++KG  P+  ++ I+++   + GR   A      M  
Sbjct: 575 GTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTE 634

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
            G +++   +++++ G  + R  D A +L++++       +++T  ++I G  + +    
Sbjct: 635 SGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEE 694

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
           A      +   G  P  V ++++I  L K G  ++A D++  +      PDS
Sbjct: 695 AKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDS 746



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 112/256 (43%), Gaps = 14/256 (5%)

Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPK-----LVCGLEVEADLVVYNALLSYFCKAGFPNQ 410
           L P SYT+  L+     + R  L        L  GL V+A  ++ + LL  FC+A   ++
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDA--IIASHLLKGFCEAKRTDE 166

Query: 411 AVK-LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY----QGIVMNNPAVNAHVH 465
           A+  L +   + G  PD +S+  LL+ LC   K  +A ++     +G  + +P V A+  
Sbjct: 167 ALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAY-- 224

Query: 466 TAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKH 525
             ++D   + G  +KA  LF+  +    P D+V+Y+  +  L +    ++A     QM +
Sbjct: 225 NTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVN 284

Query: 526 IAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSS 585
             V P+ +TY  ++  +      K   R+ +++    I  D      L   + K+     
Sbjct: 285 KGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKE 344

Query: 586 AVNQLVEMCNLGLIPD 601
           A +    M   G  PD
Sbjct: 345 ARDVFDTMAMKGQNPD 360


>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Glycine max]
          Length = 1012

 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 118/510 (23%), Positives = 222/510 (43%), Gaps = 46/510 (9%)

Query: 136 GMVLEAFDEMGRF---GFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSF 188
           G V+EAF+   +    G + +      +MD LFK G+     ++   +LK   +PN +++
Sbjct: 320 GRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTY 379

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
              L   CK+ DV   + V+  M ++   PNV  F  ++N + K G + +A ++L  M+ 
Sbjct: 380 TALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQ 439

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN------------------- 289
           +    +V  + +L+DG+ R  + + A   +++M   G   N                   
Sbjct: 440 MNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKE 499

Query: 290 ----------------VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
                           V  Y+SL+ G+ +    S A S +  +  +    D+V +N L  
Sbjct: 500 AQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTK 559

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEA 390
            L ++G Y+    V+  ++EL L PD  T+ S+++T  + G+      L+  ++   V  
Sbjct: 560 GLLRLGKYEPK-SVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMP 618

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           ++V YN L+   CK G   + + + + ML  G+ P       LL+    +RK D  + ++
Sbjct: 619 NMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIH 678

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
           + +V     +N  V+  ++  L   G   KA  +    +++    D+V+Y   IRG   G
Sbjct: 679 KKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTG 738

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
              E+A+  YSQM    + PN  TY  +L        ++   +L+ ++ +  +  +  T 
Sbjct: 739 SHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTY 798

Query: 571 IRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
             L     +  +   ++    EM   G IP
Sbjct: 799 NILVSGHGRVGNKRDSIKLYCEMITKGFIP 828



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 119/547 (21%), Positives = 230/547 (42%), Gaps = 66/547 (12%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G  E    ++ ++ +   +    TF   +  Y +  M    +E   +M +    PN F  
Sbjct: 390 GDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVY 449

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
            I++D  F+ G+ +      KE +      N + F+I L NL +   +   + +I  ++ 
Sbjct: 450 AILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILS 509

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           KG Y +V  +  L++ + K G  + A  ++  M        V A+  L  G  RL + + 
Sbjct: 510 KGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKYEP 569

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
              ++ +M++ G +P+ VTY S++  +        A   L+ ++S G  P++V +N+LI 
Sbjct: 570 KS-VFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIG 628

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL---PKLVCGLEVEA 390
            L K G+ +  + V   +L +  VP       LL     S +   +    K +  + +  
Sbjct: 629 GLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNL 688

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           + +VYN L++  C+ G   +A  +   M+ KG + D  ++  L+RG C    +++A N Y
Sbjct: 689 NQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTY 748

Query: 451 QGIVMNNPAVNAHVHTAIV------------DRLIE-----------------------A 475
             ++++  + N   + A++            D+L+                         
Sbjct: 749 SQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRV 808

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
           G    +I+L+   I + +     +Y V I+   + G+  +A  L ++M      PN+ TY
Sbjct: 809 GNKRDSIKLYCEMITKGFIPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRGRIPNSSTY 868

Query: 536 RVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCN 595
            V++  +CK              +  + E+D     RL K  ++    + A   L EMC 
Sbjct: 869 DVLICGWCK--------------LSCQPEMD-----RLLKLSYQ----NEAKKLLREMCE 905

Query: 596 LGLIPDE 602
            G +P E
Sbjct: 906 KGHVPSE 912



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 113/511 (22%), Positives = 213/511 (41%), Gaps = 60/511 (11%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDV 201
           + EM   G  PN F+ N+++  L K+G + L +  L+ +   + +++N  +   CK    
Sbjct: 33  YSEMVLCGVVPNVFSVNLLVHSLCKVGDLGLALGYLRNSVF-DHVTYNTVVWGFCKRGLA 91

Query: 202 SNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVL 261
                ++  MV+KG   +     IL+  +C++G +  A  ++G ++  G  L       L
Sbjct: 92  DQGFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLVQYAEWIMGNLVGGGVPLDAIGLNTL 151

Query: 262 IDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME----AKMFSIAFSFLDMLE 317
           +DG+  +  +  A  L E   +NG  P++VTY +L+  F +    AK  S+    L    
Sbjct: 152 VDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFCKRGDLAKAESVVNEILGFRR 211

Query: 318 SEGHA-----------------PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
            +                    P +V    LI    K    DD   +Y+ ++   ++PD 
Sbjct: 212 DDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDV 271

Query: 361 YTFCSLLSTVCLSGRFS-------------LLPK-----------LVCGLEVEA------ 390
            T  S+L  +C  G+ +             L P            L  G  +EA      
Sbjct: 272 VTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQ 331

Query: 391 --------DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
                   DLV+   ++    KAG   +A +++ T+L     P+  ++  LL G C    
Sbjct: 332 MVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGD 391

Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTV 502
           ++ A  V Q +   +   N    ++I++   + G  +KA+++ R+ +      +V  Y +
Sbjct: 392 VEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAI 451

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
            + G    G+ E A   Y +MK   +  N   + ++L +  +   +K  + L++D++   
Sbjct: 452 LLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKG 511

Query: 563 IELDYHTSIRLTKFIFKFHSSSSAVNQLVEM 593
           I LD      L    FK  + S+A++ + EM
Sbjct: 512 IYLDVFNYSSLMDGYFKEGNESAALSVVQEM 542



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/429 (21%), Positives = 203/429 (47%), Gaps = 12/429 (2%)

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
           +P+ ++ +  L  LC+   ++    ++  M   G  PN   +  +++   K GR+ EA+ 
Sbjct: 268 MPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFN 327

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
               M+  G S+ +   T ++DG  +  +   A  +++ +++    PN VTYT+L+ G  
Sbjct: 328 HQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHC 387

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           +      A + L  +E E   P++V  + +I+  +K G  + A++V   ++++ ++P+ +
Sbjct: 388 KVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVF 447

Query: 362 TFCSLLSTVCLSGRFSLLP---KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
            +  LL     +G+        K +    +E + ++++ LL+   ++G   +A  L   +
Sbjct: 448 VYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDI 507

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
           L KG   D +++  L+ G         A++V Q +   +   +   + A+   L+  G+ 
Sbjct: 508 LSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGK- 566

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
           ++   +F R I      D V+Y   +      G+TE A  L ++MK   V PN  TY ++
Sbjct: 567 YEPKSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNIL 626

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVE----MC 594
           +   CK   I+ V  +L ++    + + Y  +  + KF+ K +S S   + +++    + 
Sbjct: 627 IGGLCKTGAIEKVISVLHEM----LAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLV 682

Query: 595 NLGLIPDEM 603
           ++GL  ++M
Sbjct: 683 DMGLNLNQM 691



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/425 (23%), Positives = 183/425 (43%), Gaps = 29/425 (6%)

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
           VS VK +   MV  G  PNV    +L++  CK+G +  A   L   +    + +   W  
Sbjct: 26  VSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGDLGLALGYLRNSVFDHVTYNTVVW-- 83

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
              GF +    D    L  +MV+ G   + VT   L+KG+ +  +   A   +  L   G
Sbjct: 84  ---GFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLVQYAEWIMGNLVGGG 140

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
              D +  N L+D   ++G    ALD+ +   +  + PD  T+ +L++  C  G  +   
Sbjct: 141 VPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFCKRGDLAKAE 200

Query: 381 KLV-----------------CGLE-------VEADLVVYNALLSYFCKAGFPNQAVKLYN 416
            +V                 CG+E       ++  +V +  L++ +CK    +    LY 
Sbjct: 201 SVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCKHRGIDDFFSLYE 260

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
            M+  G  PD  +   +L GLC   K+ EA  + + +       N   +T I+  L+++G
Sbjct: 261 QMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSG 320

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
           R  +A     + +V    +D+V  T  + GL + G+++EA  ++  +  + + PN  TY 
Sbjct: 321 RVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYT 380

Query: 537 VMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNL 596
            +L   CK  +++  + +LQ +    +  +  T   +     K    + AV  L +M  +
Sbjct: 381 ALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQM 440

Query: 597 GLIPD 601
            ++P+
Sbjct: 441 NIMPN 445



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 90/190 (47%), Gaps = 11/190 (5%)

Query: 86  FDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEM 145
           ++ +I+V+ RL G  +    ++ E+   G      T+   +R Y  G         + +M
Sbjct: 693 YNTLITVLCRL-GMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQM 751

Query: 146 GRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDV 201
              G +PN    N +++ L   G +    K++ E +    +PN  ++NI +    +   V
Sbjct: 752 LVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGR---V 808

Query: 202 SNVKDVIGM---MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
            N +D I +   M+ KGF P    + +L+  + K G++ +A +LL  M+T G   + + +
Sbjct: 809 GNKRDSIKLYCEMITKGFIPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRGRIPNSSTY 868

Query: 259 TVLIDGFRRL 268
            VLI G+ +L
Sbjct: 869 DVLICGWCKL 878



 Score = 41.2 bits (95), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 42/210 (20%), Positives = 80/210 (38%), Gaps = 34/210 (16%)

Query: 385 GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
            L +   L ++N LL  F  +GF +Q   LY+ M+  G  P+ +S   L+  LC    + 
Sbjct: 3   ALSLVPSLPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGDLG 62

Query: 445 EAINVYQGIVMNNPAVN-----------AHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
            A+   +  V ++   N           A     ++  +++ G C  ++      +V+ Y
Sbjct: 63  LALGYLRNSVFDHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTC--NILVKGY 120

Query: 494 ---------------------PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
                                PLD +     + G  E G    A  L        V P+ 
Sbjct: 121 CQIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDI 180

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
            TY  ++ +FCK  ++   + ++ +++  R
Sbjct: 181 VTYNTLVNAFCKRGDLAKAESVVNEILGFR 210


>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
 gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
          Length = 741

 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 114/468 (24%), Positives = 197/468 (42%), Gaps = 36/468 (7%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
            G     +  +  L R G    +  +  F+  Y R  ++      F  M + G     F 
Sbjct: 87  AGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFT 146

Query: 157 RNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
              ++  L   G V   + V      +   P+   ++I +  LC          ++   +
Sbjct: 147 YAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAM 206

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
            KGF PNV ++  L++ +C  G +  A  +   M + G   +V  +T LI GF +  +++
Sbjct: 207 GKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVE 266

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A  L+ +M++ G +PNVVTYT+LI+G         AF  L  +E+ G AP+     VLI
Sbjct: 267 RAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLI 326

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADL 392
           D L K G  ++A      L++  +  +   + S++  +C SG+F                
Sbjct: 327 DALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKF---------------- 370

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
                           + A  L   ++ +GF PD + +  L+ GLC   K+ EAI++   
Sbjct: 371 ----------------DGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLND 414

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           ++ +    NA   T ++D+ +   R      +  R        DVV+YTV IR   + GR
Sbjct: 415 MIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGR 474

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
            E+A  +  QM    V PN  TY  ++  +     +      L+++ID
Sbjct: 475 MEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMID 522



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/457 (21%), Positives = 191/457 (41%), Gaps = 38/457 (8%)

Query: 184 NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
           N  ++   +   C   D+   K  +  ++R G  P+   +   +  +C+ G  A A +L 
Sbjct: 73  NLHTYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLF 132

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
            LM   G + +   +  L+ G      +  A  ++  M  +GC+P+   Y+ ++ G   A
Sbjct: 133 LLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGA 192

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
                A + L     +G  P++  +N LID     G  + A+D++ G+     +P+  T+
Sbjct: 193 GRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTY 252

Query: 364 CSLLSTVCLSG---RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
             L+   C SG   R  +L   +    +  ++V Y  L+   C  G    A +L ++M  
Sbjct: 253 TQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEA 312

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
            G  P+ ++ + L+  LC   +I+EA      +V     VN  ++T+++D L ++G+   
Sbjct: 313 CGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDG 372

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGL----------------LEGG------------- 511
           A  L ++ I E +  D   Y+  I GL                +E G             
Sbjct: 373 AHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILID 432

Query: 512 ------RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
                 R++   ++  +M    V P+  TY V + S+C++  ++  + ++  +ID  +  
Sbjct: 433 KHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRP 492

Query: 566 DYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
           +  T   L K        S A + L  M + G  P++
Sbjct: 493 NLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPND 529



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 94/415 (22%), Positives = 170/415 (40%), Gaps = 25/415 (6%)

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVD-----LGIKVLKETQLPNFLSFNIALCNLCKLN 199
           M   G  PN +   +++D L K GR++     LG  V K  ++ N + +   +  LCK  
Sbjct: 310 MEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKV-NQVIYTSMIDALCKSG 368

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
                 +++  ++ +GF P+  M+  L++  C+  ++ EA  LL  MI  G   +   +T
Sbjct: 369 KFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFT 428

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
           +LID   R  R D    + ++M   G  P+VVTYT  I+ + +      A S +  +   
Sbjct: 429 ILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDH 488

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF--- 376
           G  P+L  +N LI   + +G    A      +++    P+  ++  LL  +     +   
Sbjct: 489 GVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDL 548

Query: 377 -------------SLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
                         +L +L   V  L+  +   VY+  +    K     +A      M  
Sbjct: 549 VADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQS 608

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
              TP    +  ++      + + EA+     +V  N       +  I+  L E G  H 
Sbjct: 609 ANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHT 668

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
           A  +F   + ++Y  D +++ + I GLL+ G T +   L S M+     P +  Y
Sbjct: 669 AKSIFGDILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIY 723



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 107/509 (21%), Positives = 185/509 (36%), Gaps = 98/509 (19%)

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKL 198
           D MG+ GF PN    N ++D     G ++L I + K  Q    LPN  ++   +C  CK 
Sbjct: 204 DAMGK-GFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKS 262

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
             V     +   M+  G  PNV  +  L+   C  G +  A++LL  M   G  L+ N W
Sbjct: 263 GKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACG--LAPNEW 320

Query: 259 T--VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
           T  VLID   +  R++ A      +VQ G   N V YTS+I    ++  F  A + +  +
Sbjct: 321 TCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKI 380

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE----------------------- 353
            +EG  PD   ++ LID L +     +A+ + + ++E                       
Sbjct: 381 ITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRS 440

Query: 354 ------------LKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNAL 398
                         + PD  T+   + + C  GR      ++  +    V  +L  YN L
Sbjct: 441 DSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTL 500

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL------------------------ 434
           +  +   G  +QA      M+D G  P++ S+  LL                        
Sbjct: 501 IKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVD 560

Query: 435 ---------------------------RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTA 467
                                      R L    +++EA +   G+   N   +  V+T 
Sbjct: 561 MKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTC 620

Query: 468 IVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIA 527
           +++         +A++     +   Y   + SY   I  L E G    A  ++  +    
Sbjct: 621 MIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKE 680

Query: 528 VPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
              +   +++++    ++ N     RLL 
Sbjct: 681 YNRDEIAWKILIDGLLQKGNTADCSRLLS 709


>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 155/312 (49%), Gaps = 7/312 (2%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           F +M R G  PN    +++M+  FK G    G ++ +  +    +PN  ++N  +   C 
Sbjct: 216 FCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCN 275

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              V     V   M  KG    V  + IL+   C+  +  EA +L+  +  +G S ++  
Sbjct: 276 DGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVT 335

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           + +LI+GF  +R++D A  L+ ++  +G SP +VTY +LI G+ + +  + A   +  +E
Sbjct: 336 YNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEME 395

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
               AP  V + +LID  +++   + A +++  + +  LVPD YT+  LL  +C+ G   
Sbjct: 396 ERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMK 455

Query: 378 LLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
              KL   L    ++ + V+YN ++  +CK G   +A++L N M+  G  P+  SF   +
Sbjct: 456 EASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTI 515

Query: 435 RGLCGARKIDEA 446
             LC   K  EA
Sbjct: 516 GLLCRDEKWKEA 527



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 103/431 (23%), Positives = 193/431 (44%), Gaps = 8/431 (1%)

Query: 176 VLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGR 235
           ++ E  +P   +FN  LC L + N       +   +  K    +   F I++   C+ G 
Sbjct: 115 MIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNELKSK-VVLDAYSFGIMIKGCCEAGY 173

Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
             + ++LL ++   G S +V  +T LIDG  +   + +A  L+ KM + G  PN  TY+ 
Sbjct: 174 FVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSV 233

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           L+ GF +  +    F   + ++  G  P+   +N LI      G  D A  V+  + E  
Sbjct: 234 LMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKG 293

Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAV 412
           +     T+  L+  +C   +F    KLV  +    +  ++V YN L++ FC     + AV
Sbjct: 294 IACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAV 353

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
           +L+N +   G +P   ++  L+ G      +  A+++ + +     A +   +T ++D  
Sbjct: 354 RLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAF 413

Query: 473 IEAGRCHKAIQLFRRAIVEKYPL--DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
                  KA ++   +++EK  L  DV +Y+V + GL   G  +EA  L+  +  + + P
Sbjct: 414 ARLNHTEKACEM--HSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQP 471

Query: 531 NAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQL 590
           N+  Y  M+  +CKE +     RLL +++ + +  +  +       + +      A   L
Sbjct: 472 NSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLL 531

Query: 591 VEMCNLGLIPD 601
            +M N GL P 
Sbjct: 532 GQMINSGLKPS 542



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/359 (23%), Positives = 162/359 (45%), Gaps = 3/359 (0%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           PN + +   +   CK  +V   K++   M R G  PN   + +L+N F K G   E +Q+
Sbjct: 191 PNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQM 250

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
              M   G   +  A+  LI  +     +D A  ++ +M + G +  V+TY  LI G   
Sbjct: 251 YENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCR 310

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
            K F  A   +  +   G +P++V +N+LI+    +   D A+ +++ L    L P   T
Sbjct: 311 GKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVT 370

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
           + +L++        +    LV  +E   +    V Y  L+  F +     +A ++++ M 
Sbjct: 371 YNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLME 430

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
             G  PD Y++  LL GLC    + EA  +++ +   +   N+ ++  ++    + G  +
Sbjct: 431 KSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSY 490

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
           +A++L    +      +V S+   I  L    + +EA +L  QM +  + P+   Y+++
Sbjct: 491 RALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMV 549



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/321 (22%), Positives = 141/321 (43%), Gaps = 4/321 (1%)

Query: 286 CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL 345
           CS     Y +++  ++ +     A +FL  +  EGH P     N L+  L +   +D A 
Sbjct: 85  CSTYTPLYDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAW 144

Query: 346 DVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYF 402
            +++ L + K+V D+Y+F  ++   C +G F    +L+  LE   +  ++V+Y  L+   
Sbjct: 145 WIFNEL-KSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGC 203

Query: 403 CKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNA 462
           CK G    A  L+  M   G  P+ +++  L+ G        E   +Y+ +  +    NA
Sbjct: 204 CKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNA 263

Query: 463 HVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQ 522
           + +  ++      G   KA ++F     +     V++Y + I GL  G +  EA  L  +
Sbjct: 264 YAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHK 323

Query: 523 MKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHS 582
           +  + + PN  TY +++  FC  R +    RL   +  + +     T   L     K  +
Sbjct: 324 VNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVEN 383

Query: 583 SSSAVNQLVEMCNLGLIPDEM 603
            + A++ + EM    + P ++
Sbjct: 384 LAGALDLVKEMEERCIAPSKV 404



 Score = 43.9 bits (102), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 34/177 (19%), Positives = 72/177 (40%), Gaps = 4/177 (2%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL--- 177
           T+   +  Y + E     L+   EM      P+     I++D   ++   +   ++    
Sbjct: 370 TYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLM 429

Query: 178 -KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
            K   +P+  ++++ L  LC   ++     +   +      PN  ++  +++ +CK G  
Sbjct: 430 EKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSS 489

Query: 237 AEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTY 293
             A +LL  M+  G   +V ++   I    R  +   A  L  +M+ +G  P+V  Y
Sbjct: 490 YRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLY 546


>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
          Length = 721

 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 134/569 (23%), Positives = 228/569 (40%), Gaps = 78/569 (13%)

Query: 54  HSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARV 113
           H+T   C +  +A    + C        DV+  + ++ V+ R   R++ VR + GE+ ++
Sbjct: 176 HATPAACSTLCLAAFRLVTC---HGVAPDVRDCNRVLRVL-RDAARWDDVRAVYGEMLQL 231

Query: 114 ---GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV 170
                ++   T L       R +   M+L+  +  G  GF+ N    N+V+  L + G +
Sbjct: 232 RVEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGG-GFSLNDVTFNVVISFLAREGHL 290

Query: 171 DLGIKVLKETQL--------------------------------------PNFLSFNIAL 192
           +  +K++   +L                                      P  +++N  +
Sbjct: 291 ENAVKLVDSMRLSKKASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAII 350

Query: 193 CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
             L K       +     M   G  P+V  +  LLN +CK G + EA  LLG +   G +
Sbjct: 351 HGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLA 410

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
            +V  +  LIDG+ RL  L  A  L E+MV+ GC P+V TYT L+ G  + +  ++A  F
Sbjct: 411 PTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREF 470

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
            D + S+G  PD   +N  I     + S   A  + + ++   + PD+            
Sbjct: 471 FDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDT------------ 518

Query: 373 SGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
                               V YN ++   CK G    A +L   M+  G  PD  ++  
Sbjct: 519 --------------------VTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTC 558

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           L+   C    + EA  +  G+V +    +   +T +V      G  + A   FR+ +   
Sbjct: 559 LIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVG 618

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVK 552
              + ++Y V I  L   GRT  A+  + +M    + PN YTY +++   C+E N     
Sbjct: 619 IEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAI 678

Query: 553 RLLQDVIDARIELDYHTSIRLTKFIFKFH 581
           RL  ++    I  DY T   L K   + H
Sbjct: 679 RLYFEMHQNGIPPDYCTHNALFKGFDEGH 707



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/382 (24%), Positives = 163/382 (42%), Gaps = 43/382 (11%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLN 199
           EM   G  P     N ++  L K  + +       E +    LP+ +++N  L   CK  
Sbjct: 333 EMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAG 392

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
           ++     ++G + R G  P V  +  L++ +C++G +AEA +L   M+  G    V  +T
Sbjct: 393 NLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYT 452

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
           +L++G R++R L MA   +++M+  G  P+   Y + I   +      +AF   +++  +
Sbjct: 453 ILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLK 512

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
           G  PD V +NV+ID L K G+  DA  +   ++   L PD  T+  L+   C  G     
Sbjct: 513 GIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREA 572

Query: 380 PKLVCGL--------------------------------------EVEADLVVYNALLSY 401
            KL+ G+                                       +E + + YN L+  
Sbjct: 573 RKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHA 632

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVN 461
            C  G    A + ++ ML++G  P+ Y++  L+ G C      +AI +Y  +  N    +
Sbjct: 633 LCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPD 692

Query: 462 AHVHTAIVDRLIEAGRCHKAIQ 483
              H A+     E G  + AI+
Sbjct: 693 YCTHNALFKGFDE-GHMYHAIE 713


>gi|15219409|ref|NP_178072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75200774|sp|Q9SAJ5.1|PP133_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g79540
 gi|4835755|gb|AAD30222.1|AC007202_4 Contains similarity to gi|2827663 F18F4.190 membrane-associated
           salt-inducible-like protein from Arabidopsis thaliana
           BAC gb|AL021637 [Arabidopsis thaliana]
 gi|332198140|gb|AEE36261.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 780

 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 126/529 (23%), Positives = 234/529 (44%), Gaps = 14/529 (2%)

Query: 23  ISFKSIHQISSPKVCATTHQDFPIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHD 82
           IS + I  ++  K      +     L+ +I+ S + +  +  +   FFIW A +R+    
Sbjct: 33  ISGEVISILAKKKPIEPALEPLVPFLSKNIITSVIKDEVNRQLGFRFFIW-ASRRERLRS 91

Query: 83  VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF 142
            +SF  +I +++   G  +     + EL   G  + +  F + +  Y +  M    +E+F
Sbjct: 92  RESFGLVIDMLSEDNG-CDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESF 150

Query: 143 DEMGRFGFTPNTFARNIVMDVL-----FKIGRVDLGIKVLKETQLPNFLSFNIALCNLCK 197
             M  F   P+ F  N+++ V+     F +    +  ++LK    PN  +F I +  L K
Sbjct: 151 GRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYK 210

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
               S+ + +   M  +G  PN   + IL++  C+ G   +A +L   M T G      A
Sbjct: 211 KGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVA 270

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
              L+DGF +L R+  A  L     ++G    +  Y+SLI G   A+ ++ AF     + 
Sbjct: 271 HNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANML 330

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
            +   PD++ + +LI  LSK G  +DAL +   +    + PD+Y + +++  +C  G   
Sbjct: 331 KKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLE 390

Query: 378 LLPKLVCGL-EVEA--DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
               L   + E E+  D   +  L+   C+ G   +A +++  +   G +P   +F  L+
Sbjct: 391 EGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALI 450

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAV----NAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
            GLC + ++ EA  +   + +  PA      +H      D ++E+G   KA +       
Sbjct: 451 DGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFAD 510

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
                D+VSY V I G    G  + A  L + ++   + P++ TY  ++
Sbjct: 511 TGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLI 559



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 79/323 (24%), Positives = 147/323 (45%), Gaps = 4/323 (1%)

Query: 240 YQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG 299
           +Q L  + + G S+    + VLI  + ++   + A   + +M +  C P+V TY  +++ 
Sbjct: 112 WQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRV 171

Query: 300 FM-EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP 358
            M E   F +AF+  + +     +P+L    +L+D L K G   DA  ++D +    + P
Sbjct: 172 MMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISP 231

Query: 359 DSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLY 415
           +  T+  L+S +C  G      KL   ++      D V +NALL  FCK G   +A +L 
Sbjct: 232 NRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELL 291

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
                 GF      +  L+ GL  AR+  +A  +Y  ++  N   +  ++T ++  L +A
Sbjct: 292 RLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKA 351

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
           G+   A++L      +    D   Y   I+ L   G  EE   L  +M      P+A T+
Sbjct: 352 GKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTH 411

Query: 536 RVMLLSFCKERNIKMVKRLLQDV 558
            +++ S C+   ++  + +  ++
Sbjct: 412 TILICSMCRNGLVREAEEIFTEI 434



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 93/388 (23%), Positives = 169/388 (43%), Gaps = 57/388 (14%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV---LKETQ-LPNFLSFNIALC 193
            L+    M   G +P+T+  N V+  L   G ++ G  +   + ET+  P+  +  I +C
Sbjct: 357 ALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILIC 416

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL---------G 244
           ++C+   V   +++   + + G  P+V  F  L++  CK G + EA  LL          
Sbjct: 417 SMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPAS 476

Query: 245 LMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
           L + L  S + +  T++  G       D+A +        G SP++V+Y  LI GF  A 
Sbjct: 477 LFLRLSHSGNRSFDTMVESGSILKAYRDLAHF-----ADTGSSPDIVSYNVLINGFCRAG 531

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
               A   L++L+ +G +PD V +N LI+ L ++G  ++A  ++    + +  P  Y   
Sbjct: 532 DIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAVYR-- 589

Query: 365 SLLSTVCLSGR----FSL----LPKLVC--------------------------GLEVEA 390
           SL++  C   +    F+L    L K+ C                           L+   
Sbjct: 590 SLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTRK 649

Query: 391 D---LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
           D   L  Y   L   C++G  ++A+ +++ + +K       S V L+ GLC   ++D AI
Sbjct: 650 DELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAI 709

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
            V+   + NN  +   V   ++  L+E+
Sbjct: 710 EVFLYTLDNNFKLMPRVCNYLLSSLLES 737



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 116/260 (44%), Gaps = 4/260 (1%)

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
           L+ L+S G + D     VLI   +KMG  + A++ +  + E    PD +T+  +L  +  
Sbjct: 115 LEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMR 174

Query: 373 SGRFSLLPKLVCG----LEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
              F +L   V           +L  +  L+    K G  + A K+++ M  +G +P+  
Sbjct: 175 EEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRV 234

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
           ++  L+ GLC     D+A  ++  +  +    ++  H A++D   + GR  +A +L R  
Sbjct: 235 TYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLF 294

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
             + + L +  Y+  I GL    R  +A+ LY+ M    + P+   Y +++    K   I
Sbjct: 295 EKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKI 354

Query: 549 KMVKRLLQDVIDARIELDYH 568
           +   +LL  +    I  D +
Sbjct: 355 EDALKLLSSMPSKGISPDTY 374


>gi|223635627|sp|Q9SZ20.2|PP339_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g26800
          Length = 514

 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 188/398 (47%), Gaps = 10/398 (2%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKETQ-------LPNFLSFNIALCNLCKLNDVSNV 204
           P+    N V+  + K+   D+ I + K  +        P+  + NI +   C+    S+ 
Sbjct: 83  PSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSA 142

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
              +G M++ G  P++     L+N FC    I +A  + G M  +G    V   T+LID 
Sbjct: 143 LSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDT 202

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
             + R +  A  + ++M   G SPNVVTY+SLI G  ++   + A   L  ++S+   P+
Sbjct: 203 LCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPN 262

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPK--- 381
           ++  + LID  +K G       VY  ++++ + P+ +T+ SL+  +C+  R     K   
Sbjct: 263 VITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLD 322

Query: 382 LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
           L+       ++V Y+ L + F K+   +  +KL + M  +G   +  S   L++G   A 
Sbjct: 323 LMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAG 382

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYT 501
           KID A+ V+  +  N    N   +  ++  L   G   KA+  F      +  LD+++YT
Sbjct: 383 KIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYT 442

Query: 502 VAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
           + I G+ +    +EAY L+ ++K   V P+   Y +M+
Sbjct: 443 IMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMI 480



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 155/335 (46%), Gaps = 18/335 (5%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLN 199
           +M + G   +     I++D L K   V   ++VLK  +     PN ++++  +  LCK  
Sbjct: 183 QMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSG 242

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
            +++ +  +  M  K   PNV  F  L++ + K G++++   +  +MI +    +V  ++
Sbjct: 243 RLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYS 302

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
            LI G     R+D A  + + M+  GC+PNVVTY++L  GF ++         LD +   
Sbjct: 303 SLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQR 362

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG----- 374
           G A + V  N LI    + G  D AL V+  +    L+P+  ++  +L+ +  +G     
Sbjct: 363 GVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKA 422

Query: 375 --RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
             RF  + K    L    D++ Y  ++   CKA    +A  L+  +  K   PD  ++  
Sbjct: 423 LSRFEHMQKTRNDL----DIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTI 478

Query: 433 LLRGL--CGARKIDEAIN-VYQGIVMNNPAVNAHV 464
           ++  L   G R   +A+N  YQ  V  N +  A V
Sbjct: 479 MIAELNRAGMRTEADALNRFYQKHVRQNESAPAEV 513



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 83/395 (21%), Positives = 167/395 (42%), Gaps = 49/395 (12%)

Query: 182 LPNFLSFNIALCNLCKLN--DV-----SNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
           LP+ + FN  L  + K+   DV       +++  G+ +     P++    IL+NCFC+  
Sbjct: 82  LPSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEIS----PDLYTCNILVNCFCRCF 137

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
           + + A   LG                                   KM++ G  P++VT +
Sbjct: 138 QPSSALSYLG-----------------------------------KMMKLGIEPDIVTAS 162

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
           SL+ GF  +     A      +E  G   D+V   +LID L K      AL+V   + + 
Sbjct: 163 SLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDR 222

Query: 355 KLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQA 411
            + P+  T+ SL++ +C SGR +   + +  ++   +  +++ ++AL+  + K G  ++ 
Sbjct: 223 GISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKV 282

Query: 412 VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
             +Y  M+     P+ +++  L+ GLC   ++DEAI +   ++      N   ++ + + 
Sbjct: 283 DSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANG 342

Query: 472 LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
             ++ R    I+L           + VS    I+G  + G+ + A  ++  M    + PN
Sbjct: 343 FFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPN 402

Query: 532 AYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
             +Y ++L        ++      + +   R +LD
Sbjct: 403 IRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLD 437



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 83/359 (23%), Positives = 161/359 (44%), Gaps = 11/359 (3%)

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
           +  +++   VL  G   ++  D A +L+  M  +   P++V +  ++    + +M+ +  
Sbjct: 47  SGTTIDYREVLRSGLHNIK-FDDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQMYDVVI 105

Query: 311 SFLDMLE-SEGH--APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
           +    +E +EG   +PDL   N+L++C  +      AL     +++L + PD  T  SL+
Sbjct: 106 NLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLV 165

Query: 368 STVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
           +  CLS        +   +E   ++ D+VV   L+   CK      A+++   M D+G +
Sbjct: 166 NGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGIS 225

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT--AIVDRLIEAGRCHKAI 482
           P+  ++  L+ GLC + ++ +A        M++  +N +V T  A++D   + G+  K  
Sbjct: 226 PNVVTYSSLITGLCKSGRLADAERRLHE--MDSKKINPNVITFSALIDAYAKRGKLSKVD 283

Query: 483 QLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
            +++  I      +V +Y+  I GL    R +EA  +   M      PN  TY  +   F
Sbjct: 284 SVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGF 343

Query: 543 CKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            K   +    +LL D+    +  +  +   L K  F+      A+     M + GLIP+
Sbjct: 344 FKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPN 402



 Score = 47.8 bits (112), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 41/187 (21%), Positives = 75/187 (40%), Gaps = 8/187 (4%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG 173
           GC     T+      +++       ++  D+M + G   NT + N ++   F+ G++DL 
Sbjct: 328 GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLA 387

Query: 174 IKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
           + V         +PN  S+NI L  L    +V         M +     ++  + I+++ 
Sbjct: 388 LGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHG 447

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRL---RRLDMAGYLWEKMV-QNG 285
            CK   + EAY L   +          A+T++I    R       D     ++K V QN 
Sbjct: 448 MCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNRFYQKHVRQNE 507

Query: 286 CSPNVVT 292
            +P  V+
Sbjct: 508 SAPAEVS 514


>gi|242048586|ref|XP_002462039.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
 gi|241925416|gb|EER98560.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
          Length = 798

 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 124/515 (24%), Positives = 207/515 (40%), Gaps = 53/515 (10%)

Query: 107 VGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEM-GRFGFTPNTFARNIVMDVLF 165
           + +    G    A  F   +  +     +   ++AF  M G FG  P TF  N V+ VL 
Sbjct: 125 IADAQAAGLQPPAAAFEALIFAHASAGRHHEAVDAFSRMEGEFGCRPTTFVYNAVLRVLV 184

Query: 166 KIGRV-----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV 220
             G V      L  +++    LPN  ++N+ +  LCK     +   +   M+++G  PNV
Sbjct: 185 ASGGVVPLALALYNRMVAAGCLPNRATYNVLMDGLCKRGTAVDALKLFDEMLQRGITPNV 244

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
           +   ILL+  C  G++ EA  LL  M   G       +   + G  +  R+D A    E 
Sbjct: 245 KTHTILLSSMCNAGQLKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEA 304

Query: 281 MVQNGC-SPNVVTYTSLIKGFMEAKMFSIAFS-FLDMLESEGHAPDLVFHNVLIDCLSKM 338
           + + G     +  Y+ LI G   A  +   F  ++++LE    +PD+V + ++I   ++ 
Sbjct: 305 LRRTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADFSPDIVLYTIMIRGCAEA 364

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNAL 398
           G  DDA   +D + E +  PD  TFC                              YN L
Sbjct: 365 GRIDDAFAFFDEMKEKRFTPD--TFC------------------------------YNTL 392

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           L   C +G  + A  L + M       D  +   ++ GLC  + +DEA+ V+ G+V    
Sbjct: 393 LKALCDSGDLDGARSLMSEMAQNNVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVEVGC 452

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP-------------LDVVSYTVAIR 505
                 +  ++D L  A R  +A  LF +  V   P              D  S    + 
Sbjct: 453 HPTVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVKDSESLQKLVD 512

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
            + + G+  +AY L   +    V P+  TY  +L   CK RN+    RL +++      L
Sbjct: 513 SMCQSGQVLKAYKLLRGIMDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFSL 572

Query: 566 DYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           D  T   L   + + H  + A+    ++ ++G  P
Sbjct: 573 DEITYGTLIDSLLRAHRYNDAMTLFQDILHIGGTP 607



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/401 (23%), Positives = 161/401 (40%), Gaps = 69/401 (17%)

Query: 206 DVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF 265
           D I      G  P    FE L+      GR  EA                      +D F
Sbjct: 123 DAIADAQAAGLQPPAAAFEALIFAHASAGRHHEA----------------------VDAF 160

Query: 266 RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK-MFSIAFSFLDMLESEGHAPD 324
            R     M G       + GC P    Y ++++  + +  +  +A +  + + + G  P+
Sbjct: 161 SR-----MEG-------EFGCRPTTFVYNAVLRVLVASGGVVPLALALYNRMVAAGCLPN 208

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVC 384
              +NVL+D L K G+  DAL ++D +L+  + P+  T                      
Sbjct: 209 RATYNVLMDGLCKRGTAVDALKLFDEMLQRGITPNVKT---------------------- 246

Query: 385 GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
                     +  LLS  C AG   +A  L N+M DKG  PD  ++   L GLC A ++D
Sbjct: 247 ----------HTILLSSMCNAGQLKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVD 296

Query: 445 EAINVYQGIVMNNPAV-NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE-KYPLDVVSYTV 502
           EAI   + +      V     ++ ++D L  AGR  +  Q +   + +  +  D+V YT+
Sbjct: 297 EAIERLEALRRTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADFSPDIVLYTI 356

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
            IRG  E GR ++A+  + +MK     P+ + Y  +L + C   ++   + L+ ++    
Sbjct: 357 MIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMAQNN 416

Query: 563 IELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           + LD +T   +   + K      A+     M  +G  P  M
Sbjct: 417 VVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVEVGCHPTVM 457



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 121/543 (22%), Positives = 229/543 (42%), Gaps = 36/543 (6%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
           QR    +V++   ++S +    G+ +    ++  +   GC     T+  FL    +    
Sbjct: 237 QRGITPNVKTHTILLSSMCN-AGQLKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRV 295

Query: 136 GMVLEAFDEMGRFG-FTPNTFARNIVMDVLFKIGRVDLG----IKVLKETQL-PNFLSFN 189
              +E  + + R G F       + ++D LF  GR + G    ++VL++    P+ + + 
Sbjct: 296 DEAIERLEALRRTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADFSPDIVLYT 355

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
           I +    +   + +       M  K F P+   +  LL   C  G +  A  L+  M   
Sbjct: 356 IMIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMAQN 415

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
              L  N  T++I G  + + +D A  +++ MV+ GC P V+TY  LI G   A     A
Sbjct: 416 NVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVEVGCHPTVMTYNVLIDGLYRAHRLEEA 475

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
                 +E  G+ P L     L                  G  ++K   DS +   L+ +
Sbjct: 476 RMLFYKMEV-GNNPSLFLRLTL------------------GANQVK---DSESLQKLVDS 513

Query: 370 VCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
           +C SG+     KL+ G+    V  D+V YN LL+  CK    + A++L+  +  KGF+ D
Sbjct: 514 MCQSGQVLKAYKLLRGIMDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFSLD 573

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
             ++  L+  L  A + ++A+ ++Q I+      +  ++ +I+  L    +  +AI  + 
Sbjct: 574 EITYGTLIDSLLRAHRYNDAMTLFQDILHIGGTPSLSIYNSIMRSLCRMNKLSQAINFWF 633

Query: 487 RAIVEKYPLDVVSYTVA-IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
             +++KY L      +A  R   E G  +EA     ++       N+  Y + L+   + 
Sbjct: 634 DHLLKKYNLSAQDEVIASARKKFEEGSLDEAVRELIKIDQEYGSVNSCPYTIWLIGLIQA 693

Query: 546 RNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWR 605
           R I    ++   + ++ I++       L+K++    +  SAV+ ++   N   I   M R
Sbjct: 694 RRIDDALKIFHILEESGIDITPACCAHLSKYLCWEKNLDSAVDVMLYTLNKRFI---MSR 750

Query: 606 KLG 608
            +G
Sbjct: 751 HVG 753


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 112/484 (23%), Positives = 209/484 (43%), Gaps = 16/484 (3%)

Query: 41  HQDFPIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRF 100
           H  F +++  H    TL +  S L  +  F           DV +++ ++    R  G  
Sbjct: 210 HYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSP-------DVVTYNTLLKAHCR-KGML 261

Query: 101 ETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIV 160
              R ++  + + G      T+   +  Y R           + M  FGF P+ +  N++
Sbjct: 262 GEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVL 321

Query: 161 MDVLFKIGRVDLGIKVLKETQ-----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG 215
              L + G+VD   K+  E +      P+ +++N  +    K    S+  +++  M  KG
Sbjct: 322 AAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKG 381

Query: 216 FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAG 275
              ++    I++   C+ G++ EA   L +M   G +  V  +  LID + + R +  A 
Sbjct: 382 VKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAF 441

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
            L ++MV++G   +  T  +L+    + K +  A   L      G  PD V +  ++   
Sbjct: 442 VLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAY 501

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS-LLPKL--VCGLEVEADL 392
            K    + AL ++D + + KL P  YT+ +L+  +C  G+ +  + KL  +    +  D 
Sbjct: 502 FKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDD 561

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
             YN ++  +CK G   +A + +N ML+  F PD  +   L+ GLC   K+++AI +++ 
Sbjct: 562 TTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFES 621

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
                  V+   +  ++  L + G    A+  F          D  +Y V +  L E GR
Sbjct: 622 WAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGR 681

Query: 513 TEEA 516
           +EEA
Sbjct: 682 SEEA 685



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 111/484 (22%), Positives = 209/484 (43%), Gaps = 43/484 (8%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKV 176
           TF L +  +         L     M  FG +P+    N ++    + G +     L  ++
Sbjct: 212 TFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARM 271

Query: 177 LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
            KE   P   ++N  +    +L  +    +V+  M   GF P++  + +L    C+ G++
Sbjct: 272 KKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKV 331

Query: 237 AEAYQLLGLMITLG-TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
            EA++L   M  L   S  V  +  L+D   + +R   A  L E+M   G   ++VT+  
Sbjct: 332 DEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNI 391

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           ++KG         A   L M+  EG APD++ +N LID   K  +   A  + D ++   
Sbjct: 392 VVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSG 451

Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAV 412
           L  D++T  +LL  +C   R+    +L+          D V Y  +++ + K   P  A+
Sbjct: 452 LKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPAL 511

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN-----VYQGIVMNNPAVNAHVHT- 466
            L++ M  +  TP  Y++  L++GLC   K+ EAI+     + +G+V ++   N  +H  
Sbjct: 512 YLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAY 571

Query: 467 -----------------------------AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
                                         +++ L   G+  KAI+LF     +   +DV
Sbjct: 572 CKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDV 631

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
           ++Y   I+ L + G  + A   ++ M+   + P+A+TY V+L +  +    +  + +L  
Sbjct: 632 ITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHK 691

Query: 558 VIDA 561
           + ++
Sbjct: 692 LDES 695



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/374 (22%), Positives = 163/374 (43%), Gaps = 10/374 (2%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           PN  +FN+ +   C    +++    +  M   G  P+V  +  LL   C+ G + EA  L
Sbjct: 208 PNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTL 267

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           L  M   G + +   +  L+  + RL  +  A  + E M   G  P++ TY  L  G  +
Sbjct: 268 LARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQ 327

Query: 303 AKMFSIAFSFLDMLESEGH----APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP 358
           A     AF   D +E   H    +PD+V +N L+D   K     DAL++ + + +  +  
Sbjct: 328 AGKVDEAFKLKDEME---HLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKS 384

Query: 359 DSYTFCSLLSTVCLSGRFSLL---PKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLY 415
              T   ++  +C  G+        K++    +  D++ YN L+  +CKA    +A  L 
Sbjct: 385 SLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLM 444

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
           + M+  G   D ++   LL  LC  ++ +EA  + +         +   +  ++    + 
Sbjct: 445 DEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKE 504

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
            +   A+ L+      K    + +Y   I+GL   G+  EA    +++    + P+  TY
Sbjct: 505 NKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTY 564

Query: 536 RVMLLSFCKERNIK 549
            +++ ++CKE +++
Sbjct: 565 NIIIHAYCKEGDLE 578



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 88/367 (23%), Positives = 158/367 (43%), Gaps = 6/367 (1%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVK--DVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAY 240
           P+  + N  L  L +    S     DV   ++    +PN   F +L++  C  G +A+A 
Sbjct: 171 PSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADAL 230

Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
             L  M   G S  V  +  L+    R   L  A  L  +M + G +P   TY +L+  +
Sbjct: 231 STLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAY 290

Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV-PD 359
                   A + ++ + + G  PDL  +NVL   L + G  D+A  + D +  L +V PD
Sbjct: 291 ARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPD 350

Query: 360 SYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYN 416
             T+ +L+       R S    L+  +    V++ LV +N ++   C+ G   +A+    
Sbjct: 351 VVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLK 410

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
            M ++G  PD  ++  L+   C AR + +A  +   +V +   ++      ++  L +  
Sbjct: 411 MMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEK 470

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
           R  +A +L R      +  D VSY   +    +  + E A  L+ +M    + P+ YTY 
Sbjct: 471 RYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYN 530

Query: 537 VMLLSFC 543
            ++   C
Sbjct: 531 TLIKGLC 537



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/348 (22%), Positives = 156/348 (44%), Gaps = 14/348 (4%)

Query: 106 IVGELARVGCVIKAQTFLLFLRIY--WRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDV 163
           ++ E+ R G  +K  TF L   +Y   + + Y    E      + GF P+  +   VM  
Sbjct: 443 LMDEMVRSG--LKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAA 500

Query: 164 LFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN 219
            FK  + +  +    ++ K    P+  ++N  +  LC +  ++   D +  +++KG  P+
Sbjct: 501 YFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPD 560

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
              + I+++ +CK G + +A+Q    M+       V     L++G     +L+ A  L+E
Sbjct: 561 DTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFE 620

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
              + G   +V+TY +LI+   +      A  F   +E+ G  PD   +NV++  LS+ G
Sbjct: 621 SWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAG 680

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA-----DLVV 394
             ++A ++   L E   + + +++  L+ +     +    P++    E        D   
Sbjct: 681 RSEEAQNMLHKLDESGKLSERFSY-PLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQES 739

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
           YN  +   C  G   +A  + + M+ KG + D+ +++ L+ GL   +K
Sbjct: 740 YNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGLIKRQK 787



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 85/344 (24%), Positives = 144/344 (41%), Gaps = 46/344 (13%)

Query: 304 KMFSIAFSFLDMLESEGHA-PDLVFHNVLIDCLSKMGSYDD--ALDVYDGLLELKLVPDS 360
           ++  +A   L      GH  P L   N ++  L++  S     +LDV+  L+ L+L P+ 
Sbjct: 151 RLPHLAAQLLHSFRRRGHVRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNH 210

Query: 361 YTFCSLLSTVCLSGRFS-LLPKLVC--GLEVEADLVVYNALLSYFCKAGFPNQAVKL--- 414
           YTF  L+ T C  G  +  L  L    G  +  D+V YN LL   C+ G   +A  L   
Sbjct: 211 YTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLAR 270

Query: 415 ------------YNTMLDK--------------------GFTPDNYSFVGLLRGLCGARK 442
                       YNT++                      GF PD +++  L  GLC A K
Sbjct: 271 MKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGK 330

Query: 443 IDEAINV---YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
           +DEA  +    + + + +P V    +  +VD   +  R   A+ L      +     +V+
Sbjct: 331 VDEAFKLKDEMEHLSIVSPDVV--TYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVT 388

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           + + ++GL   G+ EEA      M    + P+  TY  ++ ++CK RN+     L+ +++
Sbjct: 389 HNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMV 448

Query: 560 DARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
            + +++D  T   L   + K      A   L      G +PDE+
Sbjct: 449 RSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEV 492


>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 927

 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 103/434 (23%), Positives = 198/434 (45%), Gaps = 9/434 (2%)

Query: 136 GMVLEAFD---EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET---QLPNFLSFN 189
           G + +A+D   +M      P  F  N ++    K+   +   K+  E     + N  ++N
Sbjct: 398 GNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIANIFTYN 457

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
             L  LCK   +S    +   M+ KG  P    +  ++   C+ G +  A  +   M+  
Sbjct: 458 SLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDC 517

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           G   +V  +++L+DG+ +    + A Y++++MV     P+  TY   I G  +    S A
Sbjct: 518 GLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEA 577

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
              L     +G  P  + +N ++D   K GS   AL  Y  + E  + P+  T+ +L++ 
Sbjct: 578 QDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLING 637

Query: 370 VCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
            C +    L  K+   +    +E D+  Y AL+  FCK      A  L++ +LD G +P+
Sbjct: 638 FCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPN 697

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
           +  +  L+ G      ++ A+N+ + ++    + +   +T ++D L++ GR   A+ L+ 
Sbjct: 698 SVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYS 757

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
               +    D++ YTV I GL   G+ E A  + ++M+  ++ PN   Y  ++    K  
Sbjct: 758 EMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAG 817

Query: 547 NIKMVKRLLQDVID 560
           N++   RL  +++D
Sbjct: 818 NLQEAFRLHNEMLD 831



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 158/342 (46%), Gaps = 42/342 (12%)

Query: 137 MVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIAL 192
           M    F +M   G  PN    +I+MD  FK G  +       +++ E  +P+  ++NI +
Sbjct: 506 MAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKI 565

Query: 193 CNLCKLNDVSNVKDVIGMMVRKGFYP---------------------------------- 218
             LCK+   S  +D++   V KGF P                                  
Sbjct: 566 NGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVS 625

Query: 219 -NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
            NV  +  L+N FCK      A ++   M   G  L + A+  LIDGF + + ++ A +L
Sbjct: 626 PNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWL 685

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
           + +++  G SPN V Y SLI G+        A +    +  EG + DL  +  LID L K
Sbjct: 686 FSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLK 745

Query: 338 MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVV 394
            G    ALD+Y  +    ++PD   +  L++ +C  G+     K++  +E   +  ++ +
Sbjct: 746 EGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPI 805

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
           YNAL++   KAG   +A +L+N MLDKG TP++ ++  L+ G
Sbjct: 806 YNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILING 847



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 124/552 (22%), Positives = 243/552 (44%), Gaps = 13/552 (2%)

Query: 61  PSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCV--IK 118
           P   I +  FI   K+ D+  D++ ++++++   +   +     G    L     V  IK
Sbjct: 152 PMPNILVDHFIGSTKRFDFDSDIRIYNYLLNSYIK-ANKLNDAIGCFNRLVESDIVPWIK 210

Query: 119 AQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK 178
              FLL   +  + +M     E +++M   G   + F  +I+M    K    +   K   
Sbjct: 211 FLNFLLTALV--KNDMIYEAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFL 268

Query: 179 ETQLP----NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
           E +      +  +++I +   CK  DV     ++  M  KG+ P+   F  ++    K G
Sbjct: 269 EAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQG 328

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
            + EA +L   M++ G  ++V   T L+ G+ +  +L  A   ++KM +NG SPN VTY 
Sbjct: 329 NMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYA 388

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
            LI+   +    + A+     ++++   P +   N LI    K+ S ++A  ++D  +  
Sbjct: 389 VLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVAC 448

Query: 355 KLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQA 411
             + + +T+ SLLS +C  G+ S    L + +    +    V YN+++   C+ G  + A
Sbjct: 449 D-IANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMA 507

Query: 412 VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
             +++ MLD G  P+  ++  L+ G       + A  V+  +V  N   +   +   ++ 
Sbjct: 508 ASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKING 567

Query: 472 LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
           L + GR  +A  + ++ + + +    ++Y   + G ++ G    A   Y +M    V PN
Sbjct: 568 LCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPN 627

Query: 532 AYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLV 591
             TY  ++  FCK  N  +  ++  ++ +  +ELD      L     K     +A     
Sbjct: 628 VITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFS 687

Query: 592 EMCNLGLIPDEM 603
           E+ + GL P+ +
Sbjct: 688 ELLDGGLSPNSV 699



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 92/372 (24%), Positives = 167/372 (44%), Gaps = 7/372 (1%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNV 204
           G  P   + N ++    + G +D+   V  +       PN ++++I +    K  D    
Sbjct: 483 GLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYA 542

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
             V   MV +   P+   + I +N  CK+GR +EA  +L   +  G       +  ++DG
Sbjct: 543 FYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDG 602

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
           F +   +  A   + +M ++G SPNV+TYT+LI GF +     +A    + + ++G   D
Sbjct: 603 FIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELD 662

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL---LPK 381
           +  +  LID   K    + A  ++  LL+  L P+S  + SL+S             L K
Sbjct: 663 IAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQK 722

Query: 382 LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
            + G  +  DL  Y  L+    K G    A+ LY+ M  KG  PD   +  L+ GLCG  
Sbjct: 723 RMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKG 782

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYT 501
           +++ A  +   +  ++   N  ++ A++    +AG   +A +L    + +    +  +Y 
Sbjct: 783 QLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYD 842

Query: 502 VAIRGLLEGGRT 513
           + I G ++GG +
Sbjct: 843 ILINGKIKGGNS 854



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/285 (22%), Positives = 121/285 (42%), Gaps = 4/285 (1%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR    + ++ +    G V    T+   +  + +       L A+ EM   G +PN    
Sbjct: 572 GRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITY 631

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQLP----NFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
             +++   K    DL +K+  E +      +  ++   +   CK  D+     +   ++ 
Sbjct: 632 TTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLD 691

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G  PN  ++  L++ +  +  +  A  L   M+  G S  +  +T LIDG  +  RL +
Sbjct: 692 GGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVL 751

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L+ +M   G  P+++ YT LI G         A   L  +E +   P++  +N LI 
Sbjct: 752 ALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIA 811

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL 378
              K G+  +A  +++ +L+  L P+  T+  L++     G  +L
Sbjct: 812 GHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGGNSAL 856


>gi|357454999|ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
 gi|357455013|ref|XP_003597787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355486828|gb|AES68031.1| Beta-D-galactosidase [Medicago truncatula]
 gi|355486835|gb|AES68038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 127/536 (23%), Positives = 238/536 (44%), Gaps = 58/536 (10%)

Query: 65  IALSFFIWCAKQRDYFHDVQSFDHMISVV--TRLTGR-FETVRGIVGELARVGCVIKAQT 121
           + + FF W  K+R++ HD  ++  +I  +   RL G  + T++ +V    +  C I    
Sbjct: 107 VKIQFFKWAGKKRNFEHDSTTYMALIRCLDENRLVGELWRTIQDMV----KSPCAIGPSE 162

Query: 122 FLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ 181
               ++I  R +M    L  F ++      P     N V+ +L + G  +   ++  E  
Sbjct: 163 LSEIVKILGRVKMVNKALSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMC 222

Query: 182 -----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
                 P+ ++++  +    KLN   +   +   M   G  P  +++  L+  + K+G++
Sbjct: 223 SEGHCFPDTVTYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKV 282

Query: 237 AEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGC---------- 286
            EA  L+  M       +V  +T LI G  +  R++ A  +++ M+++GC          
Sbjct: 283 EEALNLVHEMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNL 342

Query: 287 -------------------------SPNVVTYTSLIKGFMEAKMF-SIAFSFLDMLESEG 320
                                    +PNVVTY ++IK   E K   S A S+L+ ++ +G
Sbjct: 343 INILGRSDRLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDG 402

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
             P    +++LID   K    + AL + + + E    P    +CSL++++  + R+    
Sbjct: 403 VVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAAN 462

Query: 381 KLVCGLEV---EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
           +L   L+     + + VY  ++ +F K G  N+A+ L+N M   G  PD Y++  L+ G+
Sbjct: 463 ELFQELKENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGM 522

Query: 438 CGARKIDEAINVYQGIVMN--NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
             A  +DEA ++++ +  N  NP +N+  H  I++ L   G   +A+++F +        
Sbjct: 523 VRADMMDEAFSLFRTMEENGCNPDINS--HNIILNGLARTGGPKRAMEMFAKMKSSTIKP 580

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK---ERNI 548
           D VSY   +  L   G  EEA  L  +M       +  TY  +L +  K   +RN+
Sbjct: 581 DAVSYNTVLGCLSRAGLFEEATKLMKEMNSKGFEYDLITYSSILEAVGKVDEDRNM 636



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/402 (21%), Positives = 167/402 (41%), Gaps = 21/402 (5%)

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
           ++ F  +   +  L+ C  +   + E ++ +  M+    ++  +  + ++    R++ ++
Sbjct: 118 KRNFEHDSTTYMALIRCLDENRLVGELWRTIQDMVKSPCAIGPSELSEIVKILGRVKMVN 177

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA-PDLVFHNVL 331
            A  ++ ++    C P   TY S+I   M+           + + SEGH  PD V ++ L
Sbjct: 178 KALSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSAL 237

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE-- 389
           I    K+   D A+ ++D + E  L P +  + +L+      G+      LV  + +   
Sbjct: 238 ISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRC 297

Query: 390 -ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
              +  Y  L+    K+G    A  +Y  ML  G  PD      L+  L  + ++ EA+ 
Sbjct: 298 VPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVE 357

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV-----SYTVA 503
           +++ + + N   N   +  I+  L E     KA      + +E+   D V     +Y++ 
Sbjct: 358 LFEEMRLLNCTPNVVTYNTIIKSLFE----DKAPPSEASSWLERMKKDGVVPSSFTYSIL 413

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           I G  +  R E+A +L  +M     PP    Y  ++ S  K +  +    L Q++     
Sbjct: 414 IDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQEL----K 469

Query: 564 ELDYHTSIRLTKFIFKFHSSSSAVNQLV----EMCNLGLIPD 601
           E    +S+R+   + K        N+ +    EM  LG IPD
Sbjct: 470 ENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPD 511


>gi|302143409|emb|CBI21970.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 170/347 (48%), Gaps = 6/347 (1%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+ + F+  L ++ ++   S V  +   M   G   N     IL+N FC + R+  A+ +
Sbjct: 8   PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 67

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           LG ++ LG   S   +T LI G     ++  A  L++KM   G  P+V+TY +LI G  +
Sbjct: 68  LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 127

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
            +  + A S    + ++G +P+   ++ LI  L  +G + +A+ ++  ++  K++PD  T
Sbjct: 128 DRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLT 187

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGLEVEA------DLVVYNALLSYFCKAGFPNQAVKLYN 416
           F +L+  +C  G   ++ K +   E  +      D V YN L+   C  G    A+ L++
Sbjct: 188 FNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFH 247

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
            M+  G  PD  ++  L   LC   ++ EA+ + + I   N   + H+++ ++D +  AG
Sbjct: 248 EMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAG 307

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM 523
               A  LF +   +    DV +YT+ I GL + G   EA  L+ +M
Sbjct: 308 ELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEM 354



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/360 (23%), Positives = 167/360 (46%), Gaps = 6/360 (1%)

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M+R    P++  F  LL    +M   +    L   M + G   +     +LI+ F  L R
Sbjct: 1   MLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNR 60

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           L  A  +   +++ G  P+  T+T+LI+G         A    D +  EG  PD++ +  
Sbjct: 61  LGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGT 120

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---E 387
           LI+ L K     +AL ++  +L   + P+++T+ SL+  +C+ G +    +L   +   +
Sbjct: 121 LINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRK 180

Query: 388 VEADLVVYNALLSYFCKAGF---PNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
           +  D + +N L+   CK G     ++A+ L+  M  +G  PD  ++  L+ GLC   ++ 
Sbjct: 181 IMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLR 240

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
           +AI ++  +V+     +   +  + D L +  R  +A+ L +         D+  Y++ +
Sbjct: 241 DAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVM 300

Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
            G+   G  E A  L+S++    + P+  TY +M+   C++  +    +L  ++ +  IE
Sbjct: 301 DGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENDIE 360



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/337 (24%), Positives = 154/337 (45%), Gaps = 10/337 (2%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFL 186
           R + Y  VL  + +M  FG   NT+  NI+++    + R+     VL    K    P+  
Sbjct: 22  RMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTA 81

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           +F   +  LC    +     +   M  +GF P+V  +  L+N  CK  ++ EA  L   M
Sbjct: 82  TFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQLTEALSLFSDM 141

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
           +  G S +   ++ LI G   L     A  L+  M+     P+ +T+ +L+    +  M 
Sbjct: 142 LAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMI 201

Query: 307 SI---AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
            I   A    + +  +G  PD V +N LI  L  +G   DA+ ++  ++    +PD  T+
Sbjct: 202 QIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTY 261

Query: 364 CSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
             L   +C + R +   +L K++ G  ++ D+ +Y+ ++   C+AG    A  L++ +  
Sbjct: 262 RILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSS 321

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
           KG  PD  ++  ++ GLC    + EA  ++  +  N+
Sbjct: 322 KGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDEND 358



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 90/213 (42%), Gaps = 3/213 (1%)

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
           +V ++ LL+   +    +  + LY  M   G   + Y+   L+   C   ++  A +V  
Sbjct: 10  IVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLG 69

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
            I+      +    T ++  L   G+  +A+QLF +   E +  DV++Y   I GL +  
Sbjct: 70  DILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKDR 129

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSI 571
           +  EA  L+S M    + PN +TY  ++   C   + K   RL   +I  +I  D  T  
Sbjct: 130 QLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFN 189

Query: 572 RLTKFIFK---FHSSSSAVNQLVEMCNLGLIPD 601
            L   + K         A+    EM   GLIPD
Sbjct: 190 TLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPD 222


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 108/469 (23%), Positives = 196/469 (41%), Gaps = 36/469 (7%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALC 193
             E F  M   G  P     N ++ +  K+ R +    L  ++ +     +  +FNI + 
Sbjct: 170 AFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMIN 229

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
            LCK   +   KD +G M   G  PN+  +  +++ +C  GR+  A  +L  M       
Sbjct: 230 VLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEP 289

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
               +  LI G  +  RL+ A  ++E+MVQ G  P+ V Y +LI GF       +A ++ 
Sbjct: 290 DSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYK 349

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           D +  +G +P +  +N LI  L      D+A  +   + E  + PD+ T           
Sbjct: 350 DEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAIT----------- 398

Query: 374 GRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
                                YN L++ +C+     +A  L++ ML  G  P   ++  L
Sbjct: 399 ---------------------YNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSL 437

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           L  L    ++ EA ++++ I       +A +  A++D          A +L +     K 
Sbjct: 438 LHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKV 497

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
           P D V++   ++G    G+ EEA  L+ +MK   + P+  ++  ++  + +  +IK   R
Sbjct: 498 PPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFR 557

Query: 554 LLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
           +  +++D        T   L + + K      A   L EM + G+ PD+
Sbjct: 558 VRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDD 606



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 101/447 (22%), Positives = 186/447 (41%), Gaps = 42/447 (9%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
           + EM R     + +  NI+++VL K G++      +   +     PN +++N  +   C 
Sbjct: 209 YAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCS 268

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              V     ++  M R+   P+   +  L++  CK GR+ EA ++   M+  G   S   
Sbjct: 269 SGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVI 328

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  LIDGF     LDMA    ++M++ G SP + TY SLI      +    A   +  ++
Sbjct: 329 YNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQ 388

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
            +G +PD + +N+LI+   +  +   A  ++D +L   + P   T+ SLL  +    R  
Sbjct: 389 EKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMK 448

Query: 378 LLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
               L   +  E    D +++NAL+   C       A +L   M      PD  +F  ++
Sbjct: 449 EADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIM 508

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
           +G C   K++EA  ++                                ++ RR I     
Sbjct: 509 QGHCREGKVEEARELFD-------------------------------EMKRRGIKP--- 534

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
            D +S+   I G    G  ++A+ + ++M      P   TY  ++   CK +   + + L
Sbjct: 535 -DHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEEL 593

Query: 555 LQDVIDARIELDYHTSIRLTKFIFKFH 581
           L++++   +  D  T   L + I K +
Sbjct: 594 LKEMVSKGMTPDDTTYFTLIEGIAKVN 620



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/361 (21%), Positives = 153/361 (42%), Gaps = 9/361 (2%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           +GR E    I+  + R      + T+   +    +        + F+EM + G  P+   
Sbjct: 269 SGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVI 328

Query: 157 RNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N ++D     G +D+      ++LK+   P   ++N  +  L         + +I  + 
Sbjct: 329 YNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQ 388

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
            KG  P+   + IL+N +C+     +A+ L   M+  G   +   +T L+    +  R+ 
Sbjct: 389 EKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMK 448

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A  L++K+   G  P+ + + +LI G         AF  L  ++     PD V  N ++
Sbjct: 449 EADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIM 508

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEV 388
               + G  ++A +++D +    + PD  +F +L+S     G     F +  +++     
Sbjct: 509 QGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEML-DTGF 567

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
              ++ YNAL+   CK    + A +L   M+ KG TPD+ ++  L+ G+      DE  N
Sbjct: 568 NPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDENKN 627

Query: 449 V 449
            
Sbjct: 628 T 628


>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
 gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
          Length = 796

 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 129/542 (23%), Positives = 228/542 (42%), Gaps = 58/542 (10%)

Query: 91  SVVTRLTGRFETV--RGIVGELARVGCVIKAQTFLLFLRI-YWRGEMYGMVLEAFDEMGR 147
            VV R  G F+ +  +G+   +    C+I       +L I  W+      V+    EM  
Sbjct: 253 QVVDRAEGVFQQMIDKGVRPNIVTYTCLIHG-----YLSIGQWK-----EVVRMLKEMSA 302

Query: 148 FGFTPNTFARNIVMDVLFKIGR-----------VDLGIK-----------------VLKE 179
            G  P+ F   +++D L K G+           +  GIK                  L E
Sbjct: 303 HGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSE 362

Query: 180 TQL-----------PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLN 228
                         PN   FNI  C   K   +    D+   M ++G  PNV  +  L++
Sbjct: 363 MHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLID 422

Query: 229 CFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSP 288
             CK+GR+ +A      MI  G + ++  +T L+ G   + + + AG L+ +MV  G  P
Sbjct: 423 ALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHP 482

Query: 289 NVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVY 348
           NVV + +++           A   +D++E  G  PD++ +N LI     +G  D+A  + 
Sbjct: 483 NVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLL 542

Query: 349 DGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCK 404
           D +L + L P+  T+ +LL   C  GR    +S+  +++    +   +V YN +L    K
Sbjct: 543 DIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSN-GITPVVVTYNTILHGLFK 601

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV 464
               ++A +LY  M+  G     Y++  +L GL     +DEA+ ++Q +   +  V+   
Sbjct: 602 TRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIIT 661

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
              ++  L++ GR   A+ LF          DV +Y +    L+E G  EE   ++S+M+
Sbjct: 662 FNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEME 721

Query: 525 HIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH-TSIRLTKFIFKFHSS 583
                PN+     ++       +I      L  + +    L+   TS+ ++ F  + H +
Sbjct: 722 KSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSKIDEKNFSLEASTTSMLISLFSREEHQA 781

Query: 584 SS 585
            S
Sbjct: 782 KS 783



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 125/518 (24%), Positives = 220/518 (42%), Gaps = 15/518 (2%)

Query: 136 GMVLEAFD---EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET----QLPNFLSF 188
           G V +A++   +M   G  PN     IV+D L K   VD    V ++       PN +++
Sbjct: 218 GQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTY 277

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
              +     +     V  ++  M   G  P+   + +LL+  CK G+  EA +L   MI 
Sbjct: 278 TCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIR 337

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
            G    V+ + +++ G+     L       + MV NG SPN   +  +   F +  M   
Sbjct: 338 KGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGE 397

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A    + +  +G +P++V +  LID L K+G  DDA   ++ ++   + P+   F SL+ 
Sbjct: 398 AMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVY 457

Query: 369 TVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
            +C   ++    +L   +    +  ++V +N ++   C  G   +A +L + M   G  P
Sbjct: 458 GLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRP 517

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           D  S+  L+RG C   K DEA  +   ++      N   +  ++      GR   A  +F
Sbjct: 518 DIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVF 577

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
           +  +       VV+Y   + GL +  R  EA  LY  M       + YTY ++L    K 
Sbjct: 578 QEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKN 637

Query: 546 RNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWR 605
             +    ++ Q +    +++D  T   +   + K      A+N    +   GL+PD    
Sbjct: 638 NCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTY 697

Query: 606 KLGLLSDETMTPVSL--FDG-FVPCERRAGNANHLLLN 640
           +  L+++  +   SL  FDG F   E+     N L+LN
Sbjct: 698 R--LIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLN 733



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 113/467 (24%), Positives = 211/467 (45%), Gaps = 51/467 (10%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEI-LLNCFCKMGRIAEAYQ 241
           P+  +++I +   C++  + +     G++++ G+  N  +    LL   C   R+ EA  
Sbjct: 92  PDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEAMG 151

Query: 242 -LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN---GCSPNVVTYTSLI 297
            LL  M  LG + +V ++  L+ GF    R + A  L   M       C PN+V+Y ++I
Sbjct: 152 VLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVI 211

Query: 298 KGFMEAKMFSIAFS-FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
            GF        A++ FLDM + +G  P++V + ++ID L K    D A  V+  +++  +
Sbjct: 212 NGFFTEGQVDKAYNLFLDMTD-QGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGV 270

Query: 357 VPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVK 413
            P+  T+  L+      G++  + +++  +    +E D   Y  LL Y CK G   +A K
Sbjct: 271 RPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARK 330

Query: 414 LYNTMLDKGFTPD-------------------NYSFVGLLRG-------------LCGAR 441
           L+++M+ KG  PD                    +SF+ L+ G              C   
Sbjct: 331 LFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFA 390

Query: 442 K---IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
           K   I EA++++  +     + N   +  ++D L + GR   A   F + I E    ++V
Sbjct: 391 KKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIV 450

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL--LQ 556
            +T  + GL    + E+A  L+ +M +  + PN   +  ++ + C E  +   +RL  L 
Sbjct: 451 VFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLM 510

Query: 557 DVIDARIE-LDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
           + +  R + + Y+  IR    + K   +S  ++    M ++GL P+E
Sbjct: 511 ERVGTRPDIISYNALIRGHCLVGKTDEASKLLDI---MLSVGLKPNE 554



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 117/279 (41%), Gaps = 17/279 (6%)

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----------FSLLPKLV--CGLE 387
           S DDAL ++D  L          F  LL+ V  + R           S   +++  C  +
Sbjct: 30  SVDDALKLFDEFLHHARPASIIAFNQLLAAVSSASRRGSSSTSELVVSCFNRMIRDCCSK 89

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG-LLRGLCGARKIDEA 446
           V  D+  Y+ L+  FC+ G        +  +L  G+  ++   V  LL+GLC A+++ EA
Sbjct: 90  VAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEA 149

Query: 447 INVY-QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR---RAIVEKYPLDVVSYTV 502
           + V  + +       N   +  ++    +  R  +A++L        V   P ++VSY  
Sbjct: 150 MGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNT 209

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
            I G    G+ ++AY L+  M    +PPN  TY +++   CK + +   + + Q +ID  
Sbjct: 210 VINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKG 269

Query: 563 IELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           +  +  T   L             V  L EM   GL PD
Sbjct: 270 VRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPD 308



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/277 (22%), Positives = 129/277 (46%), Gaps = 12/277 (4%)

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK-LVPDSYTFCSLLSTVCLSGR----F 376
           APD+  +++L+ C  +MG  +     +  +L+    V D      LL  +C + R     
Sbjct: 91  APDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEAM 150

Query: 377 SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD---KGFTPDNYSFVGL 433
            +L + +  L    ++V YN LL  FC      +A++L + M D   +   P+  S+  +
Sbjct: 151 GVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTV 210

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           + G     ++D+A N++  +       N   +T ++D L +A    +A  +F++ I +  
Sbjct: 211 INGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGV 270

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
             ++V+YT  I G L  G+ +E   +  +M    + P+ +TY ++L   CK+      ++
Sbjct: 271 RPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARK 330

Query: 554 LLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQL 590
           L   +I   I+ D    + +   I   +++  A++++
Sbjct: 331 LFDSMIRKGIKPD----VSIYGIILHGYATKGALSEM 363


>gi|296087527|emb|CBI34116.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 133/605 (21%), Positives = 259/605 (42%), Gaps = 69/605 (11%)

Query: 56  TLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTR-------------------- 95
            L N P+  +A SFF    K+  + H+V ++  +I V+ R                    
Sbjct: 72  NLKNEPN--LAWSFFTQL-KESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIVGSKES 128

Query: 96  -----LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGF 150
                +T  F+ +R   GE+      +      + ++ Y R  M+   ++A  +  R GF
Sbjct: 129 VLGFDITALFDVLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGF 188

Query: 151 TPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKD 206
            P+  + N +M+ L + G++D+ + + +  +     PN  ++ I +  LC+  +     D
Sbjct: 189 VPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVD 248

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
           V   M   G  PN       +   C   R    Y+ L  +      +   A+T +I GF 
Sbjct: 249 VFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFC 308

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL- 325
              +L  A  ++  MV  G +P+   Y +LI  + +A     A +  + + S G   +L 
Sbjct: 309 SEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNLV 368

Query: 326 ---------------VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
                          V +N+++D L K+G  ++A+++ + +   ++  D   + +L++  
Sbjct: 369 DQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGY 428

Query: 371 CLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           CL G+      +   ++   +E D+V YN L+  F + G   +A++L + +  +G  P++
Sbjct: 429 CLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNS 488

Query: 428 YSFVGLLRGLCGARKIDEA---INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
            +   ++ GLC A K+ EA   +N  +   + N       ++A+VD   +A    KA +L
Sbjct: 489 ATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLEN-------YSAMVDGYCKANFTRKAYEL 541

Query: 485 FRR----AIVEKYPLDV----VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
           F R     I+    LDV    + Y   I      G  + A +++  +    + P+  TY 
Sbjct: 542 FSRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYT 601

Query: 537 VMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNL 596
           +M+  +C+   ++  + +  D+ +  I+ D  T   +     K ++   A+N   EM   
Sbjct: 602 MMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIAR 661

Query: 597 GLIPD 601
           GL PD
Sbjct: 662 GLQPD 666



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 107/475 (22%), Positives = 207/475 (43%), Gaps = 31/475 (6%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G+ +    I   L R+G      T+ +F++   R   +   ++ F EM   G  PN    
Sbjct: 206 GKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTC 265

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQLPNF----LSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           +  ++ L    R DLG + L+  +  N+     ++   +   C    +   +DV   MV 
Sbjct: 266 STYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVN 325

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS----------------LSVNA 257
           +G  P+  ++  L++ +CK G + +A  L   M++ G                  L    
Sbjct: 326 EGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVL 385

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF-MEAKMFSIAFSFLDML 316
           + +++D   +L +++ A  L  +M     S +VV YT+LI G+ ++ K+      F +M 
Sbjct: 386 YNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMK 445

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
           E  G  PD+V +N+L+   S+ G   +AL++ D +    L P+S T   ++  +C++G+ 
Sbjct: 446 E-RGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKV 504

Query: 377 SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF--------TPDNY 428
                 +  LE +  L  Y+A++  +CKA F  +A +L++ +  +G          P+  
Sbjct: 505 KEAEAFLNTLEDKC-LENYSAMVDGYCKANFTRKAYELFSRLSKQGILRMLALDVEPNQI 563

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
            +  L+   C    +  A  V+  +V      +   +T +++         +A  +F   
Sbjct: 564 MYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDM 623

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
                  DV++YTV + G  +    ++A  LY +M    + P+  TY  +L   C
Sbjct: 624 KERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALLPGKC 678



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/253 (21%), Positives = 109/253 (43%), Gaps = 8/253 (3%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           L G+    + +  E+   G      T+ + +  + R  +    LE  D +G  G  PN+ 
Sbjct: 430 LQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSA 489

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG 215
             N +++ L   G+V      L   +     +++  +   CK N      ++   + ++G
Sbjct: 490 THNRIIEGLCMAGKVKEAEAFLNTLEDKCLENYSAMVDGYCKANFTRKAYELFSRLSKQG 549

Query: 216 FY--------PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
                     PN  M+  L+  FC+ G +  A  +  +++  G +  V  +T++I+G+ R
Sbjct: 550 ILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCR 609

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
           +  L  A  ++  M + G  P+V+TYT ++ G  +      A +  D + + G  PD+V 
Sbjct: 610 VNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVT 669

Query: 328 HNVLIDCLSKMGS 340
           +  L+      GS
Sbjct: 670 YTALLPGKCNFGS 682



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 111/245 (45%), Gaps = 16/245 (6%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCK 197
           F+EM   G  P+    NI++    + G     +++L     +   PN  + N  +  LC 
Sbjct: 441 FEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCM 500

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL------GLMITLGT 251
              V   +  +  +  K     +  +  +++ +CK     +AY+L       G++  L  
Sbjct: 501 AGKVKEAEAFLNTLEDKC----LENYSAMVDGYCKANFTRKAYELFSRLSKQGILRMLAL 556

Query: 252 SLSVNA--WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
            +  N   +  LI  F R   +  A  +++ +V+ G +P+V+TYT +I G+        A
Sbjct: 557 DVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREA 616

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
               + ++  G  PD++ + V++D  SK  +  DA+++YD ++   L PD  T+ +LL  
Sbjct: 617 RDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALLPG 676

Query: 370 VCLSG 374
            C  G
Sbjct: 677 KCNFG 681


>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 493

 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 90/366 (24%), Positives = 179/366 (48%), Gaps = 3/366 (0%)

Query: 184 NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
           +  SF+  +   C+ + +S     +G M++ GF P++  F  L+N FC + RI EA  L+
Sbjct: 107 DLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLV 166

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
             ++ LG   +V  +  +ID     R++D A  +   M + G  P+V+TY SLI     +
Sbjct: 167 DQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHS 226

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
             + ++   L  +   G  PD++  + +ID   K G   +A   YD +++  + P+  T+
Sbjct: 227 GKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTY 286

Query: 364 CSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
            SL++ +C+ G      K++  +  +    + V YN L++ +CK+   + A+K+   M  
Sbjct: 287 NSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSH 346

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
            G   D +++  L +G C A + + A  V   +V      + +    ++D L E G+  K
Sbjct: 347 DGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEK 406

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
           A+         +  + +++Y + I+G+ +  + E+A+ L+  +    V P+  TY  M++
Sbjct: 407 ALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMI 466

Query: 541 SFCKER 546
              ++R
Sbjct: 467 GLRRKR 472



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 92/373 (24%), Positives = 181/373 (48%), Gaps = 7/373 (1%)

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
           LP+ + F+  L  + KL     V  +   +   G   ++  F  L++CFC+  R++ A  
Sbjct: 70  LPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLALS 129

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
            LG M+ LG   S+  +  L++GF  + R+  A  L +++V  G  PNVV Y ++I    
Sbjct: 130 CLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLC 189

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           E +    A   L+ +E  G  PD++ +N LI  L   G +  +  +   ++ + + PD  
Sbjct: 190 ENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVI 249

Query: 362 TFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           TF +++      G+     K    +    V+ ++V YN+L++  C  G  ++A K+ N M
Sbjct: 250 TFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFM 309

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT--AIVDRLIEAG 476
           + KGF P+  ++  L+ G C ++++D+A+ +    VM++  V+    T   +     +AG
Sbjct: 310 VSKGFFPNAVTYNTLVNGYCKSKRVDDAMKIL--CVMSHDGVDGDTFTYNTLYQGYCQAG 367

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
           + + A ++  R +      D+ ++ + + GL E G+ E+A +    ++         TY 
Sbjct: 368 QFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYN 427

Query: 537 VMLLSFCKERNIK 549
           +++   CK   ++
Sbjct: 428 IIIKGMCKANKVE 440



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 88/344 (25%), Positives = 169/344 (49%), Gaps = 3/344 (0%)

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
           P++  F  LL    K+ +      L   +  LG S  + +++ LID F R  RL +A   
Sbjct: 71  PSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLALSC 130

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
             KM++ G  P++VT+ SL+ GF        A S +D +   G+ P++V +N +ID L +
Sbjct: 131 LGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 190

Query: 338 MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVV 394
               D ALDV + + ++ + PD  T+ SL++ +  SG++ +  +++  +    +  D++ 
Sbjct: 191 NRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVIT 250

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           ++A++  F K G   +A K Y+ M+ +   P+  ++  L+ GLC    +DEA  V   +V
Sbjct: 251 FSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMV 310

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
                 NA  +  +V+   ++ R   A+++      +    D  +Y    +G  + G+  
Sbjct: 311 SKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFN 370

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
            A  + ++M    V P+ YT+ ++L   C+   I+     L+D+
Sbjct: 371 AAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDL 414



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/248 (23%), Positives = 117/248 (47%), Gaps = 5/248 (2%)

Query: 124 LFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIK----VLKE 179
           L  R++  G+ +G+      +M R G  P+    + ++DV  K G++    K    +++ 
Sbjct: 219 LITRLFHSGK-WGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQR 277

Query: 180 TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEA 239
           +  PN +++N  +  LC    +   K V+  MV KGF+PN   +  L+N +CK  R+ +A
Sbjct: 278 SVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDA 337

Query: 240 YQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG 299
            ++L +M   G       +  L  G+ +  + + A  +  +MV  G  P++ T+  L+ G
Sbjct: 338 MKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDG 397

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
             E      A   L+ L+       ++ +N++I  + K    +DA  ++  L    + PD
Sbjct: 398 LCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPD 457

Query: 360 SYTFCSLL 367
             T+ +++
Sbjct: 458 VITYTTMM 465



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 68/295 (23%), Positives = 134/295 (45%), Gaps = 8/295 (2%)

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCN 194
           L+  + M + G  P+    N ++  LF  G+  +  ++L +       P+ ++F+  +  
Sbjct: 198 LDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDV 257

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
             K   +   K     M+++   PN+  +  L+N  C  G + EA ++L  M++ G   +
Sbjct: 258 FGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPN 317

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
              +  L++G+ + +R+D A  +   M  +G   +  TY +L +G+ +A  F+ A   L 
Sbjct: 318 AVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLA 377

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            + S G  PD+   N+L+D L + G  + AL   + L + + V    T+  ++  +C + 
Sbjct: 378 RMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKAN 437

Query: 375 RFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTM-LDKGFTP 425
           +      L C L    V  D++ Y  ++    +     +A +LY  M  D G  P
Sbjct: 438 KVEDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHELYRKMKKDDGLMP 492



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/264 (20%), Positives = 101/264 (38%), Gaps = 38/264 (14%)

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV---EADLVVYNA 397
           ++DAL ++  + E + +P    F  LL  +    ++  +  L   +E+     DL  ++ 
Sbjct: 54  FNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFST 113

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
           L+  FC+    + A+     M+  GF P   +F  L+ G C   +I EA+          
Sbjct: 114 LIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAM---------- 163

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAY 517
                    ++VD+++  G                Y  +VV Y   I  L E  + + A 
Sbjct: 164 ---------SLVDQIVGLG----------------YEPNVVIYNTIIDSLCENRQVDTAL 198

Query: 518 ILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFI 577
            + + M+ + + P+  TY  ++          +  R+L D++   I  D  T   +    
Sbjct: 199 DVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVF 258

Query: 578 FKFHSSSSAVNQLVEMCNLGLIPD 601
            K      A  Q  EM    + P+
Sbjct: 259 GKEGQLLEAKKQYDEMIQRSVDPN 282


>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
          Length = 621

 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 125/524 (23%), Positives = 225/524 (42%), Gaps = 39/524 (7%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           L G     +  +  L   G    +  +  F+  Y R  M       F  M   G     F
Sbjct: 84  LAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAF 143

Query: 156 ARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
               ++  L   G V   + V      ++  P+   +   +  LC+       + ++   
Sbjct: 144 TYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEA 203

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
           +  GF PN+ ++  L++ +C  G +  A ++   M     S +V  +T LI G  +  ++
Sbjct: 204 MSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKV 263

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           + A  L+ +MV+ G  PNVVTYT+LI+G         AF  L ++E+ G  P+    +VL
Sbjct: 264 ERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVL 323

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEAD 391
           ID L K    ++A  ++ G                          SL+ K      V+ +
Sbjct: 324 IDALCKREKVEEA-QLFLG--------------------------SLVKK-----GVKVN 351

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
            VVY +L+   CK G  + A +L   M+ +GF PD +S+  L+ GLC  +K+ +A  + +
Sbjct: 352 EVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLE 411

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
            ++      +   +T I+D L+         ++F + I      D+V+YTV +R   E G
Sbjct: 412 DMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEG 471

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSI 571
           R E+A  +  QM    V PN  TY  ++  +     +       + ++    + +  +  
Sbjct: 472 RMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYT 531

Query: 572 RLTKFIFKFHSSSSAVN--QLVEMCNLG-LIPDEMWRKLGLLSD 612
            L + + K  SS ++V+  ++ +M +L  L+ D   R+L L +D
Sbjct: 532 VLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAAD 575



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 100/423 (23%), Positives = 189/423 (44%), Gaps = 7/423 (1%)

Query: 184 NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
           N  ++   +   C   D+   K  +  ++  G  P+   +   +  +C+ G +  A ++ 
Sbjct: 71  NLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF 130

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
            LM   G   +   +T L+ G      +  A  ++  M  + C+P+   Y +++ G  EA
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEA 190

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
                A   L+   S G  P++V +N LID     G  + AL V++G+   +  P+  T+
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTY 250

Query: 364 CSLLSTVCLSGRFS----LLPKLV-CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
             L+  +C SG+      L  ++V  GL  E ++V Y AL+   C  G    A +L + M
Sbjct: 251 TELIHGLCKSGKVERAMVLFSRMVEAGL--EPNVVTYTALIQGQCNEGHLQCAFRLLHLM 308

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
              G  P++++F  L+  LC   K++EA      +V     VN  V+T+++D L + G+ 
Sbjct: 309 ETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKI 368

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
             A +L ++ I E +  D  SY+  I GL    +  +A ++   M    +  +  TY ++
Sbjct: 369 DAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTII 428

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGL 598
           +    +E   +  K++   +I   I  D  T     +   +      A + +V+M + G+
Sbjct: 429 IDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGV 488

Query: 599 IPD 601
            P+
Sbjct: 489 FPN 491



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 98/412 (23%), Positives = 180/412 (43%), Gaps = 33/412 (8%)

Query: 132 GEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLS 187
           GEM    L+ F+ M     +PN      ++  L K G+V+  +    ++++    PN ++
Sbjct: 226 GEME-HALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVT 284

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           +   +   C    +     ++ +M   G  PN   F +L++  CK  ++ EA   LG ++
Sbjct: 285 YTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLV 344

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
             G  ++   +T LIDG  +  ++D A  L +KM+  G  P+  +Y+SLI G    K  S
Sbjct: 345 KKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLS 404

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A   L+ +  +G     V + ++ID L +    +    ++D ++   + PD  T+   +
Sbjct: 405 QATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFV 464

Query: 368 STVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
            + C  GR      ++  +    V  +LV YN L+  +   G  +QA   +  M+ KG+ 
Sbjct: 465 RSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWK 524

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           P+  S+  LLR +      D ++++++                I D         K +Q+
Sbjct: 525 PNEDSYTVLLRLVVKKSSSDNSVDIWK----------------IADM--------KDLQV 560

Query: 485 FRRAIVEKY-PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
               I E+  PL    Y+  IR L    R EEA   +  M++  + P+   Y
Sbjct: 561 LLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVY 612



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 77/330 (23%), Positives = 139/330 (42%), Gaps = 38/330 (11%)

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
           F  ++ L S   A +L  +  LI+     G    A      LL   L PDSY + S +  
Sbjct: 57  FPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLG 116

Query: 370 VCLSGR-------FSLLPKLVC-----------------GLEVEA--------------D 391
            C +G        F L+P   C                 G+  EA              D
Sbjct: 117 YCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPD 176

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
             VY  ++   C+AG   +A  L    +  GF P+   +  L+ G C A +++ A+ V++
Sbjct: 177 THVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFE 236

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
           G+  N  + N   +T ++  L ++G+  +A+ LF R +      +VV+YT  I+G    G
Sbjct: 237 GMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEG 296

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSI 571
             + A+ L   M+   + PN +T+ V++ + CK   ++  +  L  ++   ++++     
Sbjct: 297 HLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYT 356

Query: 572 RLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            L   + K     +A   + +M + G +PD
Sbjct: 357 SLIDGLCKTGKIDAADELMQKMISEGFVPD 386


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 117/517 (22%), Positives = 230/517 (44%), Gaps = 47/517 (9%)

Query: 85  SFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFL-RIYWRGEMYGMVLEAFD 143
           +FD    V+  + G     R ++ +L   G V+   +   FL RI    E   M ++ F 
Sbjct: 192 AFDIFFQVLVEI-GHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFC 250

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE----TQLPNFLSFNIALCNLCKLN 199
           E   +G + NT + NI++  L ++G+V    ++L +    +  P+ +S++  +   C L 
Sbjct: 251 E---YGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLG 307

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT----------- 248
           ++     ++  M  KG  PN   +  ++   CK+G+  EA ++L  M++           
Sbjct: 308 ELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYT 367

Query: 249 --------LGTSLSVNAW----------------TVLIDGFRRLRRLDMAGYLWEKMVQN 284
                   LG   + N W                T LI GF +  ++     L+ +M+  
Sbjct: 368 TLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISR 427

Query: 285 GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
           G  P+ VTYT+LI  + +A     AFS  + +   G  P++V +  LID L K G  D A
Sbjct: 428 GLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTA 487

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV---EADLVVYNALLSY 401
            ++ D + +  L  +   + S+++ +C +G      KL+  +EV   + D + Y  ++  
Sbjct: 488 NELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDA 547

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVN 461
           +C+ G  ++A KL   MLD+G  P   +F  L+ G C    +++   +   ++      +
Sbjct: 548 YCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPD 607

Query: 462 AHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYS 521
           A  +  ++ +       +   ++++R   +    D  +Y + I+G  +    +EA+ LY 
Sbjct: 608 AITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYK 667

Query: 522 QMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           +M      P   +Y  ++  F K++ I   + L +++
Sbjct: 668 EMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEM 704



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 121/458 (26%), Positives = 210/458 (45%), Gaps = 11/458 (2%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCN--LCKL-NDVSNVKDVI 208
           PN  A +I   VL +IG +    K+L +  L   L   +  CN  L ++ N+   ++  I
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKL-LSYGLVVTVDSCNAFLSRIANNSEGIEMAI 246

Query: 209 GMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRL 268
            +    G   N   + I++   C++G++ EA++LL  M    ++  V +++ +IDG+  L
Sbjct: 247 KVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHL 306

Query: 269 RRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH 328
             L  A  L + M   G  PN  TY S+I    +      A   L  + S+   PD V +
Sbjct: 307 GELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVY 366

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF----SLLPKLVC 384
             LI    K+G    A   +D +L  K+ PD  T+ +L+      G+     +L  +++ 
Sbjct: 367 TTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMIS 426

Query: 385 -GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
            GL+   D V Y  L+  +CKAG    A  L+N M+  G TP+  ++  L+ GLC   ++
Sbjct: 427 RGLK--PDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGEL 484

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           D A  +   +      +N  ++ ++V+ + +AG   +AI+L +   V     D ++YT  
Sbjct: 485 DTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTV 544

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           I      G  ++A+ L  +M    + P   T+ V++  FC    ++   RLL  +++  I
Sbjct: 545 IDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGI 604

Query: 564 ELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
             D  T   L K     +S ++       M N G+ PD
Sbjct: 605 VPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPD 642



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 97/429 (22%), Positives = 193/429 (44%), Gaps = 7/429 (1%)

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCN 194
           L+  D+M   G  PN +  N ++ +L KIG+     KVL+E      +P+ + +   +  
Sbjct: 313 LKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHG 372

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
             KL  V         M+ K   P+   +  L+  F + G++ E   L   MI+ G    
Sbjct: 373 FFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPD 432

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
              +T LID + +   +  A  L  +MVQ G +PN+VTY +LI G  +      A   LD
Sbjct: 433 EVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLD 492

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            +  +G   ++  +N +++ + K G+ + A+ +   +    + PD+ T+ +++   C  G
Sbjct: 493 EMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLG 552

Query: 375 RFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
                 KL+  +    ++  +V +N L++ FC  G      +L   ML+KG  PD  ++ 
Sbjct: 553 DIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYN 612

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            L++  C    ++    +Y+ +     A +++ +  ++    +A    +A  L++  I +
Sbjct: 613 TLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEK 672

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
            Y   V SY   I+   +  +  EA  L+ +M+   +  +   Y   +    +E ++++ 
Sbjct: 673 GYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEIT 732

Query: 552 KRLLQDVID 560
             L  + I+
Sbjct: 733 LNLCDEAIE 741



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/361 (24%), Positives = 150/361 (41%), Gaps = 39/361 (10%)

Query: 136 GMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSF 188
           G V+E    F EM   G  P+      ++DV  K G +     L  ++++    PN +++
Sbjct: 412 GKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTY 471

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
              +  LCK  ++    +++  M +KG   NV ++  ++N  CK G I +A +L+  M  
Sbjct: 472 GALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEV 531

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
            G       +T +ID + RL  +D A  L ++M+  G  P VVT+  L+ GF    M   
Sbjct: 532 AGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLED 591

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
               L  +  +G  PD + +N L+       S +    +Y  +    + PDS T      
Sbjct: 592 GDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNT------ 645

Query: 369 TVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
                                     YN L+   CKA    +A  LY  M++KG+ P   
Sbjct: 646 --------------------------YNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVT 679

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
           S+  L++     +KI EA  +++ +  +    +  ++   VD   E G     + L   A
Sbjct: 680 SYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEA 739

Query: 489 I 489
           I
Sbjct: 740 I 740



 Score = 39.7 bits (91), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 26/108 (24%), Positives = 50/108 (46%)

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
           +  SY + I  L   G+ +EA+ L  QM   +  P+  +Y  ++  +C    +K   +L+
Sbjct: 257 NTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLM 316

Query: 556 QDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
            D+    ++ + +T   +   + K   S  A   L EM +  +IPD +
Sbjct: 317 DDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNV 364


>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g09680-like [Glycine max]
          Length = 509

 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 166/374 (44%), Gaps = 38/374 (10%)

Query: 174 IKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKM 233
           ++VL     PNF  FN+ +   CK+  V + + V   + ++G  P V  F  L++  CK 
Sbjct: 131 LEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKA 190

Query: 234 GRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTY 293
           G + E ++L G+M +      V  ++ LI+G  +  RLD    L+++M   G  PN VT+
Sbjct: 191 GAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTF 250

Query: 294 TSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE 353
           T LI G  +     +A     M+ ++G  PDLV +N LI+ L K+G   +A  + + +  
Sbjct: 251 TVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSA 310

Query: 354 LKLVPDSYTFCSLLSTVCLSGRFSL---LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQ 410
             L PD  TF +L+   C  G       + + +    +E D V +  L+S  C+ G  + 
Sbjct: 311 SGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHD 370

Query: 411 AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
           A ++   ML  GF PD+ ++                                   T +VD
Sbjct: 371 AERMLRDMLSAGFKPDDPTY-----------------------------------TMVVD 395

Query: 471 RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
              + G      +L +    + +   VV+Y   + GL + G+ + A +L   M ++ V P
Sbjct: 396 CFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAP 455

Query: 531 NAYTYRVMLLSFCK 544
           N  TY ++L    K
Sbjct: 456 NDITYNILLEGHSK 469



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 146/309 (47%), Gaps = 3/309 (0%)

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           + VL+ GF ++  +  A  +++++ + G  P VV++ +LI G  +A      F    ++E
Sbjct: 145 FNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRLKGVME 204

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
           SE   PD+   + LI+ L K G  D+   ++D +    LVP+  TF  L+   C  G+  
Sbjct: 205 SERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVD 264

Query: 378 LLPK---LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
           L  K   ++    V  DLV YNAL++  CK G   +A +L N M   G  PD  +F  L+
Sbjct: 265 LALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLI 324

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            G C    ++ A+ + + +V     ++    T ++  L   GR H A ++ R  +   + 
Sbjct: 325 DGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFK 384

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
            D  +YT+ +    + G     + L  +M+     P   TY  ++   CK+  +K  K L
Sbjct: 385 PDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKML 444

Query: 555 LQDVIDARI 563
           L  +++  +
Sbjct: 445 LDAMLNVGV 453



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 91/347 (26%), Positives = 161/347 (46%), Gaps = 15/347 (4%)

Query: 267 RLR--RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
           RLR   L+ +   + +++ +G  PN   +  L+ GF +      A    D +   G  P 
Sbjct: 117 RLRPVELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPT 176

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF---SLLPK 381
           +V  N LI    K G+ ++   +   +   ++ PD +TF +L++ +C  GR    SLL  
Sbjct: 177 VVSFNTLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFD 236

Query: 382 LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
            +CG  +  + V +  L+   CK G  + A+K +  ML +G  PD  ++  L+ GLC   
Sbjct: 237 EMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVG 296

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYT 501
            + EA  +   +  +    +    T ++D   + G    A+++ RR + E   LD V++T
Sbjct: 297 DLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFT 356

Query: 502 VAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
           V I GL   GR  +A  +   M      P+  TY +++  FCK+ N+ M  +LL++    
Sbjct: 357 VLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKE---- 412

Query: 562 RIELDYH-----TSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
            ++ D H     T   L   + K     +A   L  M N+G+ P+++
Sbjct: 413 -MQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDI 458



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 115/231 (49%), Gaps = 4/231 (1%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIK----VLKETQLPNFLSFNIALCNLCK 197
           FDEM   G  PN     +++D   K G+VDL +K    +L +   P+ +++N  +  LCK
Sbjct: 235 FDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCK 294

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
           + D+   + ++  M   G  P+   F  L++  CK G +  A ++   M+  G  L   A
Sbjct: 295 VGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVA 354

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +TVLI G  R  R+  A  +   M+  G  P+  TYT ++  F +     + F  L  ++
Sbjct: 355 FTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQ 414

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           S+GH P +V +N L++ L K G   +A  + D +L + + P+  T+  LL 
Sbjct: 415 SDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLE 465



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 4/95 (4%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLN 199
           +M   GF P+     +V+D   K G V +G K+LKE Q    +P  +++N  +  LCK  
Sbjct: 377 DMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQG 436

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
            V N K ++  M+  G  PN   + ILL    K G
Sbjct: 437 QVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHG 471


>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
          Length = 615

 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 103/417 (24%), Positives = 192/417 (46%), Gaps = 27/417 (6%)

Query: 175 KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG---FYPNVRMFEILLNCFC 231
           ++L+  +  +    N AL ++ + +  + V      M R G     P V  + IL+ C C
Sbjct: 45  ELLRRGRGASIYGLNRALADVARHSPAAAVSRY-NRMARAGAGKVTPTVHTYAILIGCCC 103

Query: 232 KMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL-DMAGYLWEKMVQNGCSPNV 290
           + GR+   +  LG ++  G  +    +T L+ G    +R  D    +  +M + GC P+V
Sbjct: 104 RAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDV 163

Query: 291 VTYTSLIKGFMEAKMFSIAFSFLDMLESE---GHAPDLVFHNVLIDCLSKMG-------- 339
            +Y +L+KG  +      A   L M+  +   G  PD+V +N +++   K G        
Sbjct: 164 FSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQ 223

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL-------EVEADL 392
           + D A++V + +++  ++PD  T+ S+L   C SG+    PK   G         VE ++
Sbjct: 224 AMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQ----PKEAIGTLKKMRSDGVEPNV 279

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           V Y++L++Y CK G   +A K++++M  +G  PD  ++  LL+G C   ++ E+  ++  
Sbjct: 280 VTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDL 339

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           +V      +   +  ++D    AG+  +A +L    +      D+V+Y   I G     R
Sbjct: 340 MVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSR 399

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
            ++A  L+ +M    V PN  TY ++L      R     K L   +  +  +L+  T
Sbjct: 400 MDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELST 456



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 108/425 (25%), Positives = 196/425 (46%), Gaps = 22/425 (5%)

Query: 142 FDEMGRFG---FTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF----LSFNIALCN 194
           ++ M R G    TP      I++    + GR+DLG   L       F    ++F   L  
Sbjct: 77  YNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKG 136

Query: 195 LCKLNDVSNVKD-VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT---LG 250
           LC     S+  D V+  M   G  P+V  +  LL   C   R  EA +LL +M      G
Sbjct: 137 LCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGG 196

Query: 251 TSLSVNAWTVLIDGFRR--------LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           +   V ++  +++GF +         + +D A  +   MV+NG  P+ +TY S++ G+  
Sbjct: 197 SPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCS 256

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
           +     A   L  + S+G  P++V ++ L++ L K G   +A  ++D + +  L PD  T
Sbjct: 257 SGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIAT 316

Query: 363 FCSLLSTVCLSGRF---SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
           + +LL   C  GR      L  L+  + V+ D++ YN L+   C AG  ++A KL  +M+
Sbjct: 317 YRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMV 376

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
             G  PD  ++  L+ G C   ++D+A+ +++ +V +  + N   +  I+  L    R  
Sbjct: 377 SVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTA 436

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
            A +L+         L++ +Y + + GL +   T+EA  ++  +    +     T+ +M+
Sbjct: 437 AAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 496

Query: 540 LSFCK 544
            +  K
Sbjct: 497 GALLK 501



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 74/351 (21%), Positives = 159/351 (45%), Gaps = 7/351 (1%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALC 193
            +E  + M + G  P+    N ++      G+    I  LK+ +     PN ++++  + 
Sbjct: 228 AMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMN 287

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
            LCK    +  + +   M ++G  P++  +  LL   CK GR+ E+ +L  LM+ +G   
Sbjct: 288 YLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKP 347

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
            +  +  LIDG     ++D A  L   MV  G  P++VTY +LI G+        A +  
Sbjct: 348 DIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALF 407

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC-- 371
             + S G +P+++ +N+++  L        A ++Y  + +     +  T+  +L  +C  
Sbjct: 408 KEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKN 467

Query: 372 -LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
            L+     + + +C  +++ +   +N ++    K G  ++A  L+      G  PD  ++
Sbjct: 468 NLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTY 527

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
             +   L     ++E  +++  +  N  + ++ +  +IV +L++ G   +A
Sbjct: 528 SLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA 578



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/342 (23%), Positives = 148/342 (43%), Gaps = 18/342 (5%)

Query: 278 WEKMVQNGC---SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
           + +M + G    +P V TY  LI     A    + F+ L  +  +G   D +    L+  
Sbjct: 77  YNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKG 136

Query: 335 LSKMGSYDDALD-VYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVC------GLE 387
           L       DA+D V   + EL  +PD +++ +LL  +C   R     +L+       G  
Sbjct: 137 LCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGG 196

Query: 388 VEADLVVYNALLSYFCKAGFP--------NQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
              D+V YN +L+ F K G          ++A+++ NTM+  G  PD  ++  +L G C 
Sbjct: 197 SPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCS 256

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
           + +  EAI   + +  +    N   ++++++ L + GR  +A ++F          D+ +
Sbjct: 257 SGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIAT 316

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           Y   ++G  + GR  E+  L+  M  I V P+  TY  ++   C    +    +LL  ++
Sbjct: 317 YRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMV 376

Query: 560 DARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
              ++ D  T   L     +      A+    EM + G+ P+
Sbjct: 377 SVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPN 418



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 56/284 (19%), Positives = 117/284 (41%), Gaps = 10/284 (3%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA---FDEMGRFGFTPNT 154
           GR    R I   + + G      T+   L+ + +    G V+E+   FD M R G  P+ 
Sbjct: 293 GRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCK---EGRVIESEKLFDLMVRIGVKPDI 349

Query: 155 FARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGM 210
              N ++D     G++D   K+L         P+ +++   +   C+++ + +   +   
Sbjct: 350 ITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKE 409

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           MV  G  PN+  + I+L       R A A +L   +   GT L ++ + +++ G  +   
Sbjct: 410 MVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNL 469

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
            D A  +++ +          T+  +I   ++      A        + G  PD+  +++
Sbjct: 470 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSL 529

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
           + + L + GS ++  D++  + E     DS    S++  +   G
Sbjct: 530 MAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRG 573



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 50/228 (21%), Positives = 90/228 (39%), Gaps = 4/228 (1%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           L G+ +    ++  +  VG      T+   +  Y R       L  F EM   G +PN  
Sbjct: 361 LAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNII 420

Query: 156 ARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
             NI++  LF   R     +L + + K        ++NI L  LCK N       +   +
Sbjct: 421 TYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 480

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
                    R F I++    K GR+ EA  L       G    V  ++++ +       L
Sbjct: 481 CLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSL 540

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
           +    L+  M +NGCS +     S+++  ++    + A ++L M++ +
Sbjct: 541 EELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEK 588


>gi|147846788|emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
          Length = 733

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 124/552 (22%), Positives = 224/552 (40%), Gaps = 73/552 (13%)

Query: 48  LAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIV 107
           L P  V + L     + +AL FF W  +Q  Y HD   +  M+ ++++ T   +  + ++
Sbjct: 99  LKPRQVCAVLQLQTDERVALRFFYWADRQWRYRHDPIVYYAMLEILSK-TKLCQGAKRVL 157

Query: 108 GELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKI 167
             +A+     + + F   +  Y R       +     M + G  P+    N  + VL   
Sbjct: 158 RLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRXLTMMQKAGIEPDLSICNTAIHVLVMG 217

Query: 168 GRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMF 223
            R+D  ++ L+  Q+    PN +++N  +   C L+ + +  ++I  M  KG  P+   +
Sbjct: 218 NRLDKAVRFLERMQIVEIXPNVITYNCLIKGYCDLHRLEDAXELIAEMPFKGCSPDKISY 277

Query: 224 EILLNCFCKMGRIAEAYQLLGLMIT----LGTSLSVN----------------------- 256
             ++   CK  RI E   L+  M+     L   ++ N                       
Sbjct: 278 YTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAE 337

Query: 257 ---------AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
                     ++ ++  F R  R+D A  +  +M   GC P+VVTYTS+I G  + +   
Sbjct: 338 ERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVD 397

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A   L  +   G  P+ V +  L++ L K G+  +A ++ +   E   +P++ T     
Sbjct: 398 QAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAIT----- 452

Query: 368 STVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
                                      Y+ L+  F + G  ++A  L   M+ KGF P  
Sbjct: 453 ---------------------------YSVLMHGFRREGKSSEACDLVREMIKKGFFPTP 485

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
                L++ LC   K+DEA    +  + N  AVN    T ++    +      A+ L   
Sbjct: 486 VEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDD 545

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN 547
             +     DVV+YT  I  L + GR EEA  L  +M  +   P   TYR ++  +C+   
Sbjct: 546 MYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQYCRMGR 605

Query: 548 IKMVKRLLQDVI 559
           ++ + +LL+ ++
Sbjct: 606 VEDLLKLLEKML 617



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 83/376 (22%), Positives = 165/376 (43%), Gaps = 35/376 (9%)

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           +F   + +  +   + N    + MM + G  P++ +    ++      R+ +A + L  M
Sbjct: 171 AFGYVMVSYSRAGKLRNAMRXLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERM 230

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM--EAK 304
             +    +V  +  LI G+  L RL+ A  L  +M   GCSP+ ++Y +++ GF+  E +
Sbjct: 231 QIVEIXPNVITYNCLIKGYCDLHRLEDAXELIAEMPFKGCSPDKISYYTVM-GFLCKEKR 289

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
           +  +      ML+     PD V +N  +  LSK G  D+AL+      E +         
Sbjct: 290 IKELRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRF-------- 341

Query: 365 SLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
                                     D V Y+A++  FC+ G  ++A ++ N M  KG  
Sbjct: 342 ------------------------RVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCI 377

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           PD  ++  ++ GLC  RK+D+A  + + +  +    N   +TA+++ L + G   +A ++
Sbjct: 378 PDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREM 437

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
              +    +  + ++Y+V + G    G++ EA  L  +M      P      +++ S C+
Sbjct: 438 MNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQ 497

Query: 545 ERNIKMVKRLLQDVID 560
           E  +   KR ++  ++
Sbjct: 498 EEKVDEAKRFMEQCLN 513



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/388 (22%), Positives = 167/388 (43%), Gaps = 52/388 (13%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNL 195
           E  +EM   G  P+      V++ L +  +VD   K+L++       PN +S+   L  L
Sbjct: 366 EIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGL 425

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG---TS 252
           CK  +    ++++ M     + PN   + +L++ F + G+ +EA  L+  MI  G   T 
Sbjct: 426 CKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTP 485

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
           + +N   +LI    +  ++D A    E+ + NGC+ NVV +T++I GF +      A S 
Sbjct: 486 VEIN---LLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSL 542

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
           LD +      PD+V +  +ID L K G  ++A  +   +L +  +P              
Sbjct: 543 LDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTP------------ 590

Query: 373 SGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
                               V Y  ++  +C+ G     +KL   ML +      Y+ V 
Sbjct: 591 --------------------VTYRTVIHQYCRMGRVEDLLKLLEKMLSRQECRTAYNQV- 629

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG----RCHKAIQLFRRA 488
            +  LC    +++A  +   ++     ++A+    +++  +  G      + A ++F R 
Sbjct: 630 -IEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRN 688

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
           ++    L      V+ + +LE G++EEA
Sbjct: 689 LIPDLKL---CEKVSKKLMLE-GKSEEA 712



 Score = 47.8 bits (112), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 29/156 (18%), Positives = 69/156 (44%), Gaps = 6/156 (3%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD-- 171
           GC +    F   +  + + +     L   D+M      P+      ++D L K GR++  
Sbjct: 515 GCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEA 574

Query: 172 --LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
             L +K+L+   +P  +++   +   C++  V ++  ++  M+ +        +  ++  
Sbjct: 575 TKLAMKMLRVGWIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQECRTA--YNQVIEK 632

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF 265
            C  G + +AY+LLG ++   + +  N   +LI+ +
Sbjct: 633 LCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESY 668


>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
          Length = 1095

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 121/505 (23%), Positives = 219/505 (43%), Gaps = 43/505 (8%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
           F++M R    P+      ++D   + GR D   +VL E Q+    P+ L+++  L   CK
Sbjct: 357 FNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCK 416

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            + +    D+I  +  +    N  M+ IL++ FC++G +++A Q+L  M+  G    V  
Sbjct: 417 HSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVIT 476

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           ++ LI+G  ++  +     +  +M ++G  PN V YT+L+  F +A     A  +   + 
Sbjct: 477 YSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIY 536

Query: 318 SEGHAPDLVFHNVL-----------------------------------IDCLSKMGSYD 342
             G   + V HN L                                   ID   + G+  
Sbjct: 537 RSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVL 596

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALL 399
           +A  VYD ++     PD  T+ SLL  +C  G      + +  L  +A   D    N LL
Sbjct: 597 EAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLL 656

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
              CK G  ++A+ L   M+ +   PD Y++  LL G C   K+  A+ + Q ++     
Sbjct: 657 VGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLV 716

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV-EKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
            +   +T +++ L+  G+   A  +F+  I  E    D ++Y   + G L+GG+  E   
Sbjct: 717 PDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIER 776

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
           L   M    V P++ +Y +++  + K+  +     L +D++   I+ D  T   L   + 
Sbjct: 777 LMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLC 836

Query: 579 KFHSSSSAVNQLVEMCNLGLIPDEM 603
           ++     AV  L +M   G+ PD +
Sbjct: 837 EYGLIEIAVKFLEKMVLEGVFPDNL 861



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 93/422 (22%), Positives = 191/422 (45%), Gaps = 7/422 (1%)

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLND 200
           M     TP+  + N ++   F  G+++L I    ++L+++  P+  ++   +   C+   
Sbjct: 325 MREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGR 384

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
               + V+  M   G  P+   +  LLN +CK  ++  A  L+  + +   S++   +T+
Sbjct: 385 TDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTI 444

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           LIDGF +L  +  A  + + M+ +G  P+V+TY++LI G  +  M       L  ++  G
Sbjct: 445 LIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSG 504

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS--- 377
             P+ V +  L+    K G   +AL  +  +    LV +S    +LL +    G  +   
Sbjct: 505 VLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAE 564

Query: 378 LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
              + +  +++  D+  +N ++  +C+ G   +A  +Y+ M+  G+ PD  ++  LLRGL
Sbjct: 565 QFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGL 624

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
           C    + +A      ++    A++      ++  + + G   +A+ L  + +      D 
Sbjct: 625 CQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDT 684

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
            +YT+ + G  + G+   A IL   M    + P+   Y  +L     E  +K    + Q+
Sbjct: 685 YTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQE 744

Query: 558 VI 559
           +I
Sbjct: 745 II 746



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 112/478 (23%), Positives = 211/478 (44%), Gaps = 20/478 (4%)

Query: 158 NIVMDVLF---KIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
           NIV++ L    K+ + +  ++ +K  +LPN +++N  L    K     +   ++  M + 
Sbjct: 234 NIVLNSLCTQGKLSKAESMLQKMKNCRLPNAVTYNTILNWYVKKGRCKSALRILDDMEKN 293

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           G   ++  + I+++  CK+ R A AY LL  M  +  +    ++  LI GF    ++++A
Sbjct: 294 GIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLA 353

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
            Y++ +M++    P+V TYT+LI G+        A   L  ++  G  P  + ++ L++ 
Sbjct: 354 IYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNG 413

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV-CGLE--VEAD 391
             K      ALD+   L    +  +   +  L+   C  G  S   +++ C L   ++ D
Sbjct: 414 YCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPD 473

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
           ++ Y+AL++  CK G  ++  ++ + M   G  P+N  +  L+   C A    EA+  + 
Sbjct: 474 VITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFV 533

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
            I  +    N+ +H A++      G   +A Q  +     K   DV S+   I    + G
Sbjct: 534 DIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRG 593

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSI 571
              EA+ +Y  M     PP+  TY  +L   C+  ++   K  +  +++    +D  T  
Sbjct: 594 NVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLN 653

Query: 572 RLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTPVSLFDGFVPCER 629
            L   I K  +   A++   +M    ++PD            T T   L DGF  C+R
Sbjct: 654 TLLVGICKHGTLDEALDLCEKMVTRNILPD------------TYTYTILLDGF--CKR 697



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 116/537 (21%), Positives = 222/537 (41%), Gaps = 76/537 (14%)

Query: 65  IALSFFIWCAKQRDYFH-DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFL 123
           I L+ +I+    R      V ++  +I    R  GR +  R ++ E+   G      T+ 
Sbjct: 350 INLAIYIFNQMLRQSLKPSVATYTALIDGYCR-NGRTDEARRVLYEMQITGVRPSELTYS 408

Query: 124 LFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----E 179
             L  Y +    G  L+    +     + N     I++D   ++G V    ++LK    +
Sbjct: 409 ALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLAD 468

Query: 180 TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGR---- 235
              P+ ++++  +  +CK+  +   K+++  M + G  PN  ++  L+  FCK G     
Sbjct: 469 GIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEA 528

Query: 236 -------------------------------IAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
                                          IAEA Q    M  +  S  V ++  +ID 
Sbjct: 529 LKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDS 588

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
           + +   +  A  +++ MV++G  P++ TY SL++G  +      A  F+  L  +  A D
Sbjct: 589 YCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAID 648

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVC 384
               N L+  + K G+ D+ALD+ + ++   ++PD+YT                      
Sbjct: 649 EKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYT---------------------- 686

Query: 385 GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
                     Y  LL  FCK G    A+ L   ML+KG  PD  ++  LL GL    ++ 
Sbjct: 687 ----------YTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVK 736

Query: 445 EAINVYQGIVMNNPA-VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV-EKYPLDVVSYTV 502
            A  ++Q I+       +   + ++++  ++ G+ ++  +L R     E YP    SY +
Sbjct: 737 AASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYP-SSASYNI 795

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
            + G ++ G+      LY  M    + P+  TYR+++   C+   I++  + L+ ++
Sbjct: 796 LMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMV 852



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 118/544 (21%), Positives = 232/544 (42%), Gaps = 25/544 (4%)

Query: 82   DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
            DV ++  +I+ + ++ G     + I+  + + G +     +   +  + +       L+ 
Sbjct: 473  DVITYSALINGMCKM-GMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKY 531

Query: 142  FDEMGRFGFTPNTFARNIVMDVLFK---IGRVDLGIKVLKETQLP-NFLSFNIALCNLCK 197
            F ++ R G   N+   N ++   ++   I   +   + +   ++  +  SFN  + + C+
Sbjct: 532  FVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQ 591

Query: 198  LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              +V     V   MVR G+ P++  +  LL   C+ G + +A + +  ++    ++    
Sbjct: 592  RGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKT 651

Query: 258  WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
               L+ G  +   LD A  L EKMV     P+  TYT L+ GF +      A   L M+ 
Sbjct: 652  LNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMML 711

Query: 318  SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL-ELKLVPDSYTFCSLLSTVCLSGRF 376
             +G  PD + +  L++ L   G    A  ++  ++ +  L  D   + S+++     G+ 
Sbjct: 712  EKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQI 771

Query: 377  SLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
            + + +L+  +   EV      YN L+  + K G  ++ + LY  M+ +G  PDN ++  L
Sbjct: 772  NEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLL 831

Query: 434  LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR------- 486
            + GLC    I+ A+   + +V+     +      ++    E  +   A+QLF        
Sbjct: 832  IFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGD 891

Query: 487  -----RAIVEKYPLDVVSYTVA----IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
                     +   L VV   VA    +RGL + G+ EEA I++S +    + P   T+  
Sbjct: 892  IDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTT 951

Query: 538  MLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLG 597
            ++   CKE  I     L Q +    +++D  T   L   +        A++   EM + G
Sbjct: 952  LMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKG 1011

Query: 598  LIPD 601
            L+P+
Sbjct: 1012 LLPN 1015



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 109/460 (23%), Positives = 209/460 (45%), Gaps = 29/460 (6%)

Query: 136  GMVLEAF---DEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSF 188
            G VLEAF   D M R G+ P+      ++  L + G +    +  + +L++    +  + 
Sbjct: 593  GNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTL 652

Query: 189  NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
            N  L  +CK   +    D+   MV +   P+   + ILL+ FCK G++  A  LL +M+ 
Sbjct: 653  NTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLE 712

Query: 249  LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV-QNGCSPNVVTYTSLIKGFMEA-KMF 306
             G      A+T L++G     ++  A Y++++++ + G   + + Y S++ G+++  ++ 
Sbjct: 713  KGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQIN 772

Query: 307  SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
             I     +M E+E + P    +N+L+    K G     L +Y  +++  + PD+ T+  L
Sbjct: 773  EIERLMRNMHENEVY-PSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLL 831

Query: 367  LSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTM----- 418
            +  +C  G   +  K +  + +E    D + ++ L+  F +    + A++L++ M     
Sbjct: 832  IFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGD 891

Query: 419  LDKGF-----------TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTA 467
            +D  F            P   +   ++RGLC   K++EAI V+  I+           T 
Sbjct: 892  IDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTT 951

Query: 468  IVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIA 527
            ++  L +  +   A  L +        +DVV+Y V I GL       +A  LY +MK   
Sbjct: 952  LMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKG 1011

Query: 528  VPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
            + PN  TY  +  +      ++  ++LL+D+ D  I   Y
Sbjct: 1012 LLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPSY 1051



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 91/429 (21%), Positives = 174/429 (40%), Gaps = 73/429 (17%)

Query: 136 GMVLEAFDE---MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIAL 192
           G VL+A      M   GF  + F+ N +++ L  I + +     LKE+ L      ++  
Sbjct: 174 GKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKES-LDRKFPLDVTT 232

Query: 193 CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
           CN                              I+LN  C  G++++A  +L  M      
Sbjct: 233 CN------------------------------IVLNSLCTQGKLSKAESMLQKM------ 256

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
                                         +N   PN VTY +++  +++      A   
Sbjct: 257 ------------------------------KNCRLPNAVTYNTILNWYVKKGRCKSALRI 286

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
           LD +E  G   DL  +N++ID L K+     A  +   + E+ L PD  ++ +L+     
Sbjct: 287 LDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFG 346

Query: 373 SGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
            G+ +L   +   +    ++  +  Y AL+  +C+ G  ++A ++   M   G  P   +
Sbjct: 347 EGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELT 406

Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
           +  LL G C   K+  A+++ + +   + ++N  ++T ++D   + G   KA Q+ +  +
Sbjct: 407 YSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCML 466

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
            +    DV++Y+  I G+ + G   E   + S+M+   V PN   Y  ++  FCK  + K
Sbjct: 467 ADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAK 526

Query: 550 MVKRLLQDV 558
              +   D+
Sbjct: 527 EALKYFVDI 535



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 98/227 (43%), Gaps = 20/227 (8%)

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL--CGARK---IDEAIN 448
           +Y   +    +A  P+QA+ +   +   GF+     F  LLR +  C       +D  +N
Sbjct: 110 IYCMAVHILVQAQMPSQAMSVLRHLALTGFSCSAI-FSSLLRTISRCDPTNLFSVDLLVN 168

Query: 449 VY--QGIVMNNPAV---------NAHVHTA--IVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
            Y  +G V++  A           A + +   I++ L+   +        + ++  K+PL
Sbjct: 169 AYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRKFPL 228

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
           DV +  + +  L   G+  +A  +  +MK+  + PNA TY  +L  + K+   K   R+L
Sbjct: 229 DVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKKGRCKSALRIL 287

Query: 556 QDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
            D+    IE D +T   +   + K   S+ A   L  M  + L PDE
Sbjct: 288 DDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDE 334


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 118/513 (23%), Positives = 218/513 (42%), Gaps = 43/513 (8%)

Query: 134 MYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK---ETQL-PNFLSFN 189
           M   V++ +  M   G  PN    N V++ L K G V     ++K   E+++ P+  ++ 
Sbjct: 195 MTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYT 254

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI-- 247
             +   C+ +D+ +   V   M ++G  PN   +  L+N  C  GR+ EA+ L+  MI  
Sbjct: 255 SMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILH 314

Query: 248 ---------------------------------TLGTSLSVNAWTVLIDGFRRLRRLDMA 274
                                              G   +V  +T LI G      L +A
Sbjct: 315 GILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVA 374

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             L+ +M ++G  PN VTY +LI   +E +    AF  L+++   G +P++V +N +I  
Sbjct: 375 IGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKG 434

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEAD 391
              +G    A+ V + +L+     +  T+ +++   C SG  +   +++  +     + D
Sbjct: 435 YCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPD 494

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
              Y  L+  FCK      A  L+N M+D G  P+  ++  L+ G C   K+D A ++ +
Sbjct: 495 EWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLE 554

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
            +  +    N   +  ++  L +      A +L +  I E    +VV+YT  I GL + G
Sbjct: 555 HMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNG 614

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSI 571
            T  A  ++++M      PN  TY  ++ +  +E  ++  + L  ++    +  D  T +
Sbjct: 615 STSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYV 674

Query: 572 RLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMW 604
           ++ +          A N L  M   G  P  +W
Sbjct: 675 KMIEAYIMSGKVEHAFNFLGRMIKAGCQP-TLW 706



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 119/513 (23%), Positives = 207/513 (40%), Gaps = 42/513 (8%)

Query: 133 EMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR----VDLGIKVLKETQLPNFLSF 188
           E     +   D + + G     FA + ++  L ++G     +D   ++L E   PN L +
Sbjct: 159 EAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIY 218

Query: 189 NIALCNLCKLNDVSNVK-----------------------------------DVIGMMVR 213
           N  +  LCK  +V++ +                                    V   M +
Sbjct: 219 NAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAK 278

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +G  PN   +  L+N  C  GR+ EA+ L+  MI  G   + +  T  I     +   + 
Sbjct: 279 EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYED 338

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L+  M   GC PNV TYT+LI G   + +  +A      +  +G  P+ V +N LI+
Sbjct: 339 AWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALIN 398

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG---RFSLLPKLVCGLEVEA 390
            L +      A  V + +      P+  T+  ++   C+ G   +  L+   +      A
Sbjct: 399 ILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSA 458

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           +LV YN ++  +C +G    A+++ + M D G  PD +S+  L+ G C   K++ A  ++
Sbjct: 459 NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLF 518

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
             +V +    N   +TA++D   +  +   A  L           +V +Y V I GL + 
Sbjct: 519 NEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQ 578

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
                A  L   M    + PN  TY  M+   CK  +  +   +   +I+     +  T 
Sbjct: 579 NNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTY 638

Query: 571 IRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
             L + + +      A N   E+   GLIPDE+
Sbjct: 639 SSLIRALGQEGKVEEAENLFAELERHGLIPDEI 671



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 116/514 (22%), Positives = 228/514 (44%), Gaps = 57/514 (11%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G +E    +  ++   GC     T+   +       +  + +  F  M R G  PNT   
Sbjct: 334 GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTY 393

Query: 158 NIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N ++++L +  R+     VL    +    PN +++N  +   C L D      V+  M++
Sbjct: 394 NALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQ 453

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +G   N+  +  ++  +C  G    A ++L LM   G      ++T LI GF ++ +++ 
Sbjct: 454 RGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMES 513

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L+ +MV +G  PN VTYT+LI G+ + +    A S L+ ++  G  P++  +NVLI 
Sbjct: 514 AFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIH 573

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLV 393
            L+K  ++  A ++   ++E  + P+  T+ +++  +C +G  SL               
Sbjct: 574 GLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSL--------------- 618

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
                            A++++N M+++G  P+  ++  L+R L    K++EA N++  +
Sbjct: 619 -----------------ALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAEL 661

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
             +    +   +  +++  I +G+   A     R I       + +Y V I+GL      
Sbjct: 662 ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL------ 715

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI-ELDYHTSIR 572
           +  Y+L  Q   +A  P+     V   SF      +   +    V+ A++ ELD   S++
Sbjct: 716 KNEYLLADQ--RLAALPDV----VPNCSF----GYQTTDQDAVSVMSAKLAELDPGLSVQ 765

Query: 573 LTKFIFKFHSSSS---AVNQLV-EMCNLGLIPDE 602
           +   +    S++      N+L+  M + GL PD+
Sbjct: 766 VQNALVSNLSTAGRWFEANELLGSMISQGLCPDQ 799



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 112/494 (22%), Positives = 210/494 (42%), Gaps = 32/494 (6%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           +V ++  +IS +  ++G  +   G+   ++R G      T+   + I             
Sbjct: 354 NVYTYTALISGLC-VSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVV 412

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCK 197
            + MGR G +PN    N ++     +G     + V    L+     N +++N  +   C 
Sbjct: 413 LNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCD 472

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
             + ++   ++ +M   G  P+   +  L+  FCK+ ++  A+ L   M+  G   +   
Sbjct: 473 SGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVT 532

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T LIDG+ +  +LD A  L E M ++GC PNV TY  LI G  +   FS A     ++ 
Sbjct: 533 YTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMI 592

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
            EG  P++V +  +ID L K GS   AL++++ ++E   +P+  T+ SL+  +   G+  
Sbjct: 593 EEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVE 652

Query: 378 LLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
               L   LE      D + Y  ++  +  +G    A      M+  G  P  +++  L+
Sbjct: 653 EAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 712

Query: 435 RGL--------------------C--GARKIDE-AINVYQGIVMN-NPAVNAHVHTAIVD 470
           +GL                    C  G +  D+ A++V    +   +P ++  V  A+V 
Sbjct: 713 KGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVS 772

Query: 471 RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
            L  AGR  +A +L    I +    D  +Y   +  LL     + A  ++  M       
Sbjct: 773 NLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEV 832

Query: 531 NAYTYRVMLLSFCK 544
           +   Y+ ++ + C+
Sbjct: 833 HLNGYKELICALCQ 846



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 102/455 (22%), Positives = 190/455 (41%), Gaps = 31/455 (6%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALC 193
            L   D M   G  P+ ++   ++    KI +++    +  E       PN +++   + 
Sbjct: 479 ALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALID 538

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
             CK   +     ++  M R G  PNV+ + +L++   K    + A +L  +MI  G   
Sbjct: 539 GYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFP 598

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
           +V  +T +IDG  +     +A  ++ KM++ GC PN++TY+SLI+   +      A +  
Sbjct: 599 NVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLF 658

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST---- 369
             LE  G  PD + +  +I+     G  + A +    +++    P  +T+  L+      
Sbjct: 659 AELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNE 718

Query: 370 -VCLSGRFSLLPKLV--CG--------------------LEVEADLVVYNALLSYFCKAG 406
            +    R + LP +V  C                     L+    + V NAL+S    AG
Sbjct: 719 YLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAG 778

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
              +A +L  +M+ +G  PD  ++  LL  L   R +D A+ V++ +      V+ + + 
Sbjct: 779 RWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYK 838

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
            ++  L +  R  +A   F   ++  +  D V   V I GLL  G  +        M+  
Sbjct: 839 ELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETR 898

Query: 527 AVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
              P+ + Y ++     K+R+ K V   +  V  A
Sbjct: 899 RYMPSFHIYTILAREASKKRSWKHVAGCITKVKRA 933


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 112/417 (26%), Positives = 191/417 (45%), Gaps = 10/417 (2%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCK 197
           F +M   G  P+T   +  M  L K GR     ++ +    +  +P+ +S++I L     
Sbjct: 325 FRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYAT 384

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
               +++ ++   M  KG   N     IL++   K G + EA  +   M   G   +V  
Sbjct: 385 EGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVT 444

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           ++ LI  F R+ RL  A   + +M+  G  PN   Y SLI GF        A  F+  + 
Sbjct: 445 YSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMM 504

Query: 318 SEG-HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR- 375
           S+G H P++VF + +I  L   G   DA DV++ ++ +   P   TF SL+   CL G+ 
Sbjct: 505 SKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKM 564

Query: 376 ---FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
              F +L  +V  + +E D+V  N L+S +CK+G  +  + L+  ML K   P   ++  
Sbjct: 565 EKAFGVLDAMV-SVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNI 623

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           +L GL  A +   A  ++  ++ +  AV+   +  ++  L       +AI LF +     
Sbjct: 624 VLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMD 683

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
              D+      I  L +  R EEA  L++ +    + PN  TY VM+ +  KE +++
Sbjct: 684 CKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVE 740



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 109/504 (21%), Positives = 207/504 (41%), Gaps = 81/504 (16%)

Query: 147 RFGFTPNTFARNIVMDVLFKIGRVDLGIKVL-----KETQLPNFLSFNIALCNLCKLNDV 201
           R G    T      +  L    R D  + VL     + + +P+ +S+N  + +LC  +  
Sbjct: 152 RAGLKTGTIQATTFLKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRS 211

Query: 202 SNVKDVIGMMVRKG--FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
               D++  M ++G    P+V  F  +++ F K G +++A  L   M+  G    V  + 
Sbjct: 212 QEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYN 271

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM-------EAKMF------ 306
            ++D   + R +D A ++  +MV  G  P+ VTY ++I G+         AKMF      
Sbjct: 272 SIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSK 331

Query: 307 -----SIAFS-----------------FLDMLESEGHAPDLV------------------ 326
                ++ FS                     + ++GH PD+V                  
Sbjct: 332 GLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADM 391

Query: 327 ---FH--------------NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
              FH              N+LI   +K G  D+A+ V+  +    + P+  T+ +L+S 
Sbjct: 392 NNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISA 451

Query: 370 VCLSGRFS-LLPKL--VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF-TP 425
            C  GR +  + K   +  + +E +  VY++L+  FC  G   +A +  + M+ KG   P
Sbjct: 452 FCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRP 511

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           +   F  ++  LC   ++ +A +V+  ++            +++D     G+  KA  + 
Sbjct: 512 NIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVL 571

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
              +      DVV+    + G  + G+ ++  IL+ +M H  V P   TY ++L    + 
Sbjct: 572 DAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRA 631

Query: 546 RNIKMVKRLLQDVIDARIELDYHT 569
                 K++  ++ID+   +D  T
Sbjct: 632 GRTSAAKKMFHEMIDSGTAVDIDT 655



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 97/442 (21%), Positives = 178/442 (40%), Gaps = 76/442 (17%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GRF  +  +   +A  G V       + +  + +  M    +  F EM   G  PN    
Sbjct: 386 GRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTY 445

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQL------PNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
           + ++    ++GR  L   + K +Q+      PN   ++  +   C   D+   K+ I  M
Sbjct: 446 STLISAFCRMGR--LADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEM 503

Query: 212 VRKGFY-PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           + KG + PN+  F  +++  C  GR+ +A  +  L+I +G   ++  +  LIDG+  + +
Sbjct: 504 MSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGK 563

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           ++ A  + + MV  G  P+VVT  +L+ G+                              
Sbjct: 564 MEKAFGVLDAMVSVGIEPDVVTNNTLVSGY------------------------------ 593

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA 390
                 K G  DD L ++  +L  K+ P + T+  +L  +  +GR S   K         
Sbjct: 594 -----CKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKK--------- 639

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
                                  +++ M+D G   D  ++  LL+GLC     DEAI ++
Sbjct: 640 -----------------------MFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLF 676

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
             +   +   +  +   +++ L +  R  +A  LF          +V +Y V IR LL+ 
Sbjct: 677 HKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKE 736

Query: 511 GRTEEAYILYSQMKHIAVPPNA 532
           G  EEA  ++S M+     P++
Sbjct: 737 GSVEEADTMFSSMEKSGCAPSS 758



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/366 (18%), Positives = 150/366 (40%), Gaps = 37/366 (10%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET 180
           T+   +  + R       +E F +M   G  PNT   + ++      G +    + + E 
Sbjct: 444 TYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEM 503

Query: 181 -----QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGR 235
                  PN + F+  + +LC    V + +DV  +++  G  P +  F  L++ +C +G+
Sbjct: 504 MSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGK 563

Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
           + +A+ +L  M+++G    V     L+ G+ +  ++D    L+ +M+     P  VTY  
Sbjct: 564 MEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNI 623

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           ++ G + A   S A      +   G A D+  + +L+  L +    D+A+ ++  L    
Sbjct: 624 VLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKL---- 679

Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLY 415
                                         ++ + D+ + N +++   K     +A  L+
Sbjct: 680 ----------------------------GAMDCKFDITILNTMINALYKVRRREEANDLF 711

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
             +   G  P+  ++  ++R L     ++EA  ++  +  +  A ++ +   I+  L++ 
Sbjct: 712 AAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQK 771

Query: 476 GRCHKA 481
           G   KA
Sbjct: 772 GDIVKA 777



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 120/279 (43%), Gaps = 14/279 (5%)

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA 390
           L D L + G+      + D L  L   PDS + CS    + L+  F+ + +   G  V A
Sbjct: 64  LFDELLRQGTPVHNRSLNDFLAALARAPDSVS-CSNGPALVLA-LFNRICREEAGPRV-A 120

Query: 391 DLVV--YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
            L V  Y  L+   C+A  P+        +L  G           L+ LC A++ DEA++
Sbjct: 121 PLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVD 180

Query: 449 VYQGIVMNNPAV-NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE--KYPLDVVSYTVAIR 505
           V    +     V +A  +  ++  L    R  +A+ + +R   E  +   DVVS+   I 
Sbjct: 181 VLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIH 240

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
           G  + G   +A  L+++M    V P+  TY  ++ + CK R +   + +L+ ++D  +E 
Sbjct: 241 GFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEP 300

Query: 566 DYHTSIRLTKFIFKFHSSS---SAVNQLVEMCNLGLIPD 601
           D    +     I  +  S     +     +M + GLIPD
Sbjct: 301 D---GVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPD 336


>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
          Length = 1315

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 115/480 (23%), Positives = 204/480 (42%), Gaps = 43/480 (8%)

Query: 101  ETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA---FDEMGRFGFTPNTFAR 157
            E    +  E++  G    + T+   +  Y R    G VLEA     EM   GF  +    
Sbjct: 813  EYAGNVFDEMSARGVYPDSCTYKYIIVGYCRN---GNVLEADRWICEMMERGFVVDNATL 869

Query: 158  NIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
             +++    +   V+  +    KV K    PN ++++  +  LCK   V    +++  MV+
Sbjct: 870  TLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVK 929

Query: 214  KGFYPNVRMFEILLNCFCKMGRIAEAYQL-LGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
             G+ PNV     L++  CK G    A++L L L+ +     +V+ +T +I G+ +  +L 
Sbjct: 930  NGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLS 989

Query: 273  MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
             A  L+E+M + G  PN  TYT+LI G  +A  FS A+  ++++ +EG  P+   +N ++
Sbjct: 990  RAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIV 1049

Query: 333  DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADL 392
            D L K G  ++A  + +   +                                 ++EAD 
Sbjct: 1050 DGLCKRGRAEEAFKLLNTGFQN--------------------------------QIEADG 1077

Query: 393  VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
            V Y  L+S  CK    NQA+   N M   GF PD + +  L+   C    + ++  ++  
Sbjct: 1078 VTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDE 1137

Query: 453  IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
            ++    A     +T+++       +   A++ F++        D +SY   I GL +  R
Sbjct: 1138 VIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESR 1197

Query: 513  TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
             +EA  LY  M    + P   T   +   +CK  +      +L+ +         HT IR
Sbjct: 1198 LDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERLNKKLWIRTVHTLIR 1257



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/360 (25%), Positives = 155/360 (43%), Gaps = 18/360 (5%)

Query: 136  GMVLEAFD---EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL-----KETQLPNFLS 187
            G V +AF+   EM + G+ PN +    ++  L K G  +   ++       +   PN  +
Sbjct: 915  GSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHT 974

Query: 188  FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
            +   +   CK   +S  + +   M  +G  PN   +  L++  CK G  ++AY+L+ LM 
Sbjct: 975  YTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMS 1034

Query: 248  TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
              G   +   +  ++DG  +  R + A  L     QN    + VTYT LI    +    +
Sbjct: 1035 NEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMN 1094

Query: 308  IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
             A  FL+ +   G  PD+  +  LI    +     D+  ++D +++L L P   T+ S++
Sbjct: 1095 QALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMI 1154

Query: 368  STVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
               C   + SL  K    +       D + Y AL+S  CK    ++A +LY+TM+DKG +
Sbjct: 1155 CGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLS 1214

Query: 425  PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
            P   + V L    C       A+ + + +       N  +    V  LI    C K + L
Sbjct: 1215 PCEVTRVTLTYEYCKTEDFASAMVILERL-------NKKLWIRTVHTLIRKLCCEKKVAL 1267



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 130/304 (42%), Gaps = 4/304 (1%)

Query: 302  EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
            E ++   A +  D + + G  PD   +  +I    + G+  +A      ++E   V D+ 
Sbjct: 808  EMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNA 867

Query: 362  TFCSLLSTVC---LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
            T   +++  C   L  R       V  + +  +L+ Y++++S  CK G   QA +L   M
Sbjct: 868  TLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEM 927

Query: 419  LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV-MNNPAVNAHVHTAIVDRLIEAGR 477
            +  G+ P+ Y+   L+ GLC     + A  ++  ++  +N   N H +TA++    +  +
Sbjct: 928  VKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEK 987

Query: 478  CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
              +A  LF R   +    +  +YT  I G  + G   +AY L   M +    PN  TY  
Sbjct: 988  LSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNS 1047

Query: 538  MLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLG 597
            ++   CK    +   +LL      +IE D  T   L     K    + A+  L +M  +G
Sbjct: 1048 IVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVG 1107

Query: 598  LIPD 601
              PD
Sbjct: 1108 FQPD 1111


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 118/513 (23%), Positives = 218/513 (42%), Gaps = 43/513 (8%)

Query: 134 MYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK---ETQL-PNFLSFN 189
           M   V++ +  M   G  PN    N V++ L K G V     ++K   E+++ P+  ++ 
Sbjct: 195 MTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYT 254

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI-- 247
             +   C+ +D+ +   V   M ++G  PN   +  L+N  C  GR+ EA+ L+  MI  
Sbjct: 255 SMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILH 314

Query: 248 ---------------------------------TLGTSLSVNAWTVLIDGFRRLRRLDMA 274
                                              G   +V  +T LI G      L +A
Sbjct: 315 GILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVA 374

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             L+ +M ++G  PN VTY +LI   +E +    AF  L+++   G +P++V +N +I  
Sbjct: 375 IGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKG 434

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEAD 391
              +G    A+ V + +L+     +  T+ +++   C SG  +   +++  +     + D
Sbjct: 435 YCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPD 494

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
              Y  L+  FCK      A  L+N M+D G  P+  ++  L+ G C   K+D A ++ +
Sbjct: 495 EWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLE 554

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
            +  +    N   +  ++  L +      A +L +  I E    +VV+YT  I GL + G
Sbjct: 555 HMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNG 614

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSI 571
            T  A  ++++M      PN  TY  ++ +  +E  ++  + L  ++    +  D  T +
Sbjct: 615 STSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYV 674

Query: 572 RLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMW 604
           ++ +          A N L  M   G  P  +W
Sbjct: 675 KMIEAYIMSGKVEHAFNFLGRMIKAGCQP-TLW 706



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 119/513 (23%), Positives = 207/513 (40%), Gaps = 42/513 (8%)

Query: 133 EMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR----VDLGIKVLKETQLPNFLSF 188
           E     +   D + + G     FA + ++  L ++G     +D   ++L E   PN L +
Sbjct: 159 EAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIY 218

Query: 189 NIALCNLCKLNDVSNVK-----------------------------------DVIGMMVR 213
           N  +  LCK  +V++ +                                    V   M +
Sbjct: 219 NAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAK 278

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +G  PN   +  L+N  C  GR+ EA+ L+  MI  G   + +  T  I     +   + 
Sbjct: 279 EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYED 338

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L+  M   GC PNV TYT+LI G   + +  +A      +  +G  P+ V +N LI+
Sbjct: 339 AWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALIN 398

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG---RFSLLPKLVCGLEVEA 390
            L +      A  V + +      P+  T+  ++   C+ G   +  L+   +      A
Sbjct: 399 ILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSA 458

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           +LV YN ++  +C +G    A+++ + M D G  PD +S+  L+ G C   K++ A  ++
Sbjct: 459 NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLF 518

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
             +V +    N   +TA++D   +  +   A  L           +V +Y V I GL + 
Sbjct: 519 NEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQ 578

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
                A  L   M    + PN  TY  M+   CK  +  +   +   +I+     +  T 
Sbjct: 579 NNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTY 638

Query: 571 IRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
             L + + +      A N   E+   GLIPDE+
Sbjct: 639 SSLIRALGQEGKVEEAENLFAELERHGLIPDEI 671



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 116/514 (22%), Positives = 228/514 (44%), Gaps = 57/514 (11%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G +E    +  ++   GC     T+   +       +  + +  F  M R G  PNT   
Sbjct: 334 GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTY 393

Query: 158 NIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N ++++L +  R+     VL    +    PN +++N  +   C L D      V+  M++
Sbjct: 394 NALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQ 453

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +G   N+  +  ++  +C  G    A ++L LM   G      ++T LI GF ++ +++ 
Sbjct: 454 RGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMES 513

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L+ +MV +G  PN VTYT+LI G+ + +    A S L+ ++  G  P++  +NVLI 
Sbjct: 514 AFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIH 573

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLV 393
            L+K  ++  A ++   ++E  + P+  T+ +++  +C +G  SL               
Sbjct: 574 GLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSL--------------- 618

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
                            A++++N M+++G  P+  ++  L+R L    K++EA N++  +
Sbjct: 619 -----------------ALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAEL 661

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
             +    +   +  +++  I +G+   A     R I       + +Y V I+GL      
Sbjct: 662 ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL------ 715

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI-ELDYHTSIR 572
           +  Y+L  Q   +A  P+     V   SF      +   +    V+ A++ ELD   S++
Sbjct: 716 KNEYLLADQ--RLAALPDV----VPNCSF----GYQTTDQDAVSVMSAKLAELDPGLSVQ 765

Query: 573 LTKFIFKFHSSSS---AVNQLV-EMCNLGLIPDE 602
           +   +    S++      N+L+  M + GL PD+
Sbjct: 766 VQNALVSNLSTAGRWFEANELLGSMISQGLCPDQ 799



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 97/440 (22%), Positives = 183/440 (41%), Gaps = 31/440 (7%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALC 193
            L   D M   G  P+ ++   ++    KI +++    +  E       PN +++   + 
Sbjct: 479 ALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALID 538

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
             CK   +     ++  M R G  PNV+ + +L++   K    + A +L  +MI  G   
Sbjct: 539 GYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFP 598

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
           +V  +T +IDG  +     +A  ++ KM++ GC PN++TY+SLI+   +      A +  
Sbjct: 599 NVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLF 658

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST---- 369
             LE  G  PD + +  +I+     G  + A +    +++    P  +T+  L+      
Sbjct: 659 AELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNE 718

Query: 370 -VCLSGRFSLLPKLV----------------------CGLEVEADLVVYNALLSYFCKAG 406
            +    R + LP +V                        L+    + V NAL+S    AG
Sbjct: 719 YLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAG 778

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
              +A +L  +M+ +G  PD  ++  LL  L   R +D A+ V++ +      V+ + + 
Sbjct: 779 RWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYK 838

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
            ++  L +  R  +A   F   ++  +  D V   V I GLL  G  +        M+  
Sbjct: 839 ELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETR 898

Query: 527 AVPPNAYTYRVMLLSFCKER 546
              P+ + Y ++     K+R
Sbjct: 899 RYMPSFHIYTILAREASKKR 918


>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 624

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 114/509 (22%), Positives = 213/509 (41%), Gaps = 61/509 (11%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR      ++ E+    CV     + + +    R   Y   L   + +   G T +T   
Sbjct: 130 GRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNC 189

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N+V++ +   G VD G+++L++  L     + +S+N  L  LC      +V++++  MV+
Sbjct: 190 NLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVK 249

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
                                     ++ L  M   G +  +  +  +IDG  +    ++
Sbjct: 250 -------------------------VHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEV 284

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  +  +M   G  PNVV Y +++KG   A  +  A   L  +  +    D V  N+L+D
Sbjct: 285 ANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVD 344

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLV 393
              + G  D  +++ + +LE   +PD                                ++
Sbjct: 345 FFCQNGLVDRVIELLEQMLEHGCMPD--------------------------------VI 372

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            Y  +++ FCK G  ++AV L   M   G  P+  S+  +L+GLC   +  +A  +   +
Sbjct: 373 TYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRM 432

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
           +      N      I++ L + G   +AI+L ++ +V     D++SY+  I GL + G+T
Sbjct: 433 IQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKT 492

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
           EEA  L + M +  + PN  TY  M  +  +E  I  V ++  ++ DA I  D      +
Sbjct: 493 EEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAV 552

Query: 574 TKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
              + K   +  A++ L  M + G +P+E
Sbjct: 553 ISSLCKRRETDLAIDFLAYMVSNGCMPNE 581



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/391 (24%), Positives = 182/391 (46%), Gaps = 23/391 (5%)

Query: 57  LLNCPSDLIALSFFI--WCAKQRDYFHDVQSF-DHMISVVTRLTGRFETVRGIVGELARV 113
           L  C +D+++ +  +   CA +R  + DV+   D M+ V   L+           ++A+ 
Sbjct: 214 LFGCEADIVSYNAVLKGLCAAKR--WGDVEELMDEMVKVHEALS-----------QMAQH 260

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG 173
           GC    + +   +    +   + +  E    M  +G  PN    N V+  +    R +  
Sbjct: 261 GCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKA 320

Query: 174 IKVLKETQLPNF----LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
            ++L E    N     ++FNI +   C+   V  V +++  M+  G  P+V  +  ++N 
Sbjct: 321 EELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVING 380

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
           FCK G I EA  LL  M + G   +  ++T+++ G     R   A  L  +M+Q GC PN
Sbjct: 381 FCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPN 440

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
            VT+ ++I    +  +   A   L  +   G  PDL+ ++ +ID L K G  ++AL++ +
Sbjct: 441 PVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLN 500

Query: 350 GLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAG 406
            ++   + P+  T+ S+   +   GR   + ++   ++   + +D V+YNA++S  CK  
Sbjct: 501 VMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRR 560

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
             + A+     M+  G  P+  ++  L++GL
Sbjct: 561 ETDLAIDFLAYMVSNGCMPNESTYTALIKGL 591



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 128/280 (45%), Gaps = 4/280 (1%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           R+E    ++ E+ +  C +   TF + +  + +  +   V+E  ++M   G  P+     
Sbjct: 316 RWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYT 375

Query: 159 IVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
            V++   K G +D  + +LK        PN +S+ I L  LC      + ++++  M+++
Sbjct: 376 TVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQ 435

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           G  PN   F  ++N  CK G + +A +LL  M+  G +  + +++ +IDG  +  + + A
Sbjct: 436 GCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEA 495

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             L   M+  G +PNV+TY+S+                 D ++      D V +N +I  
Sbjct: 496 LELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISS 555

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
           L K    D A+D    ++    +P+  T+ +L+  +   G
Sbjct: 556 LCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEG 595



 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 48/237 (20%), Positives = 99/237 (41%), Gaps = 48/237 (20%)

Query: 365 SLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
           +L+ ++C++GR +   + +      A +V YNA+++ +C+ G    A +L   +      
Sbjct: 57  ALIRSLCVAGRTADAVRALDAAGNAAGVVDYNAMVAGYCRVGQVEAARRLAAAV---PVP 113

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD------------RL 472
           P+ Y++  ++RGLCG  +I +A+ V   +   +      ++  I++            R+
Sbjct: 114 PNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRV 173

Query: 473 IEA----------GRCH-------------KAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
           +EA          G C+             + +++ R+  +     D+VSY   ++GL  
Sbjct: 174 LEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCA 233

Query: 510 G---GRTEE-------AYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
               G  EE        +   SQM      P+   Y  ++   CKE + ++   +L 
Sbjct: 234 AKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILS 290


>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
          Length = 735

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 125/524 (23%), Positives = 225/524 (42%), Gaps = 39/524 (7%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           L G     +  +  L   G    +  +  F+  Y R  M       F  M   G     F
Sbjct: 84  LAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAF 143

Query: 156 ARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
               ++  L   G V   + V      ++  P+   +   +  LC+       + ++   
Sbjct: 144 TYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEA 203

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
           +  GF PN+ ++  L++ +C  G +  A ++   M     S +V  +T LI G  +  ++
Sbjct: 204 MSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKV 263

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           + A  L+ +MV+ G  PNVVTYT+LI+G         AF  L ++E+ G  P+    +VL
Sbjct: 264 ERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVL 323

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEAD 391
           ID L K    ++A  ++ G                          SL+ K      V+ +
Sbjct: 324 IDALCKREKVEEA-QLFLG--------------------------SLVKK-----GVKVN 351

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
            VVY +L+   CK G  + A +L   M+ +GF PD +S+  L+ GLC  +K+ +A  + +
Sbjct: 352 EVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLE 411

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
            ++      +   +T I+D L+         ++F + I      D+V+YTV +R   E G
Sbjct: 412 DMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEG 471

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSI 571
           R E+A  +  QM    V PN  TY  ++  +     +       + ++    + +  +  
Sbjct: 472 RMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYT 531

Query: 572 RLTKFIFKFHSSSSAVN--QLVEMCNLG-LIPDEMWRKLGLLSD 612
            L + + K  SS ++V+  ++ +M +L  L+ D   R+L L +D
Sbjct: 532 VLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAAD 575



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/423 (23%), Positives = 189/423 (44%), Gaps = 7/423 (1%)

Query: 184 NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
           N  ++   +   C   D+   K  +  ++  G  P+   +   +  +C+ G +  A ++ 
Sbjct: 71  NLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF 130

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
            LM   G   +   +T L+ G      +  A  ++  M  + C+P+   Y +++ G  EA
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEA 190

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
                A   L+   S G  P++V +N LID     G  + AL V++G+   +  P+  T+
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTY 250

Query: 364 CSLLSTVCLSGRFS----LLPKLV-CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
             L+  +C SG+      L  ++V  GL  E ++V Y AL+   C  G    A +L + M
Sbjct: 251 TELIHGLCKSGKVERAMVLFSRMVEAGL--EPNVVTYTALIQGQCNEGHLQCAFRLLHLM 308

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
              G  P++++F  L+  LC   K++EA      +V     VN  V+T+++D L + G+ 
Sbjct: 309 ETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKI 368

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
             A +L ++ I E +  D  SY+  I GL    +  +A ++   M    +  +  TY ++
Sbjct: 369 DAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTII 428

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGL 598
           +    +E   +  K++   +I   I  D  T     +   +      A + +V+M + G+
Sbjct: 429 IDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGV 488

Query: 599 IPD 601
            P+
Sbjct: 489 FPN 491



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 99/447 (22%), Positives = 189/447 (42%), Gaps = 20/447 (4%)

Query: 132 GEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLS 187
           GEM    L+ F+ M     +PN      ++  L K G+V+  +    ++++    PN ++
Sbjct: 226 GEME-HALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVT 284

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           +   +   C    +     ++ +M   G  PN   F +L++  CK  ++ EA   LG ++
Sbjct: 285 YTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLV 344

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
             G  ++   +T LIDG  +  ++D A  L +KM+  G  P+  +Y+SLI G    K  S
Sbjct: 345 KKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLS 404

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A   L+ +  +G     V + ++ID L +    +    ++D ++   + PD  T+   +
Sbjct: 405 QATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFV 464

Query: 368 STVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
            + C  GR      ++  +    V  +LV YN L+  +   G  +QA   +  M+ KG+ 
Sbjct: 465 RSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWK 524

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVY------------QGIVMNNPAVNAHVHTAIVDRL 472
           P+  S+  LLR +      D +++++            + I      + A +++  +  L
Sbjct: 525 PNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCL 584

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
               R  +A   F              YT  I          +A  L   M      P+ 
Sbjct: 585 CRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHL 644

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVI 559
            +YR+++ S C+  N +  K +  D++
Sbjct: 645 ESYRIIISSLCEGGNFRTAKEVFGDLL 671



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 77/330 (23%), Positives = 139/330 (42%), Gaps = 38/330 (11%)

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
           F  ++ L S   A +L  +  LI+     G    A      LL   L PDSY + S +  
Sbjct: 57  FPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLG 116

Query: 370 VCLSGR-------FSLLPKLVC-----------------GLEVEA--------------D 391
            C +G        F L+P   C                 G+  EA              D
Sbjct: 117 YCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPD 176

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
             VY  ++   C+AG   +A  L    +  GF P+   +  L+ G C A +++ A+ V++
Sbjct: 177 THVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFE 236

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
           G+  N  + N   +T ++  L ++G+  +A+ LF R +      +VV+YT  I+G    G
Sbjct: 237 GMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEG 296

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSI 571
             + A+ L   M+   + PN +T+ V++ + CK   ++  +  L  ++   ++++     
Sbjct: 297 HLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYT 356

Query: 572 RLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            L   + K     +A   + +M + G +PD
Sbjct: 357 SLIDGLCKTGKIDAADELMQKMISEGFVPD 386


>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 733

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 124/552 (22%), Positives = 225/552 (40%), Gaps = 73/552 (13%)

Query: 48  LAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIV 107
           L P  V + L     + +AL FF W  +Q  Y HD   +  M+ ++++ T   +  + ++
Sbjct: 99  LKPRQVCAVLQLQTDERVALRFFYWADRQWRYRHDPIVYYAMLEILSK-TKLCQGAKRVL 157

Query: 108 GELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKI 167
             +A+     + + F   +  Y R       +     M + G  P+    N  + VL   
Sbjct: 158 RLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMG 217

Query: 168 GRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMF 223
            R+D  ++ L+  Q+    PN +++N  +   C L+ + +  ++I  M  KG  P+   +
Sbjct: 218 NRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISY 277

Query: 224 EILLNCFCKMGRIAEAYQLLGLMIT----LGTSLSVN----------------------- 256
             ++   CK  RI E   L+  M+     L   ++ N                       
Sbjct: 278 YTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAE 337

Query: 257 ---------AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
                     ++ ++  F R  R+D A  +  +M   GC P+VVTYTS+I G  + +   
Sbjct: 338 ERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVD 397

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A   L  +   G  P+ V +  L++ L K G+  +A ++ +   E   +P++ T     
Sbjct: 398 QAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAIT----- 452

Query: 368 STVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
                                      Y+ L+  F + G  ++A  L   M+ KGF P  
Sbjct: 453 ---------------------------YSVLMHGFRREGKSSEACDLVREMIKKGFFPTP 485

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
                L++ LC   K+DEA    +  + N  AVN    T ++    +      A+ L   
Sbjct: 486 VEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDD 545

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN 547
             +     DVV+YT  I  L + GR EEA  L  +M  + + P   TYR ++  +C+   
Sbjct: 546 MYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGR 605

Query: 548 IKMVKRLLQDVI 559
           ++ + +LL+ ++
Sbjct: 606 VEDLLKLLEKML 617



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/376 (22%), Positives = 167/376 (44%), Gaps = 35/376 (9%)

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           +F   + +  +   + N   V+ MM + G  P++ +    ++      R+ +A + L  M
Sbjct: 171 AFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERM 230

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM--EAK 304
             +    +V  +  LI G+  L RL+ A  L  +M   GCSP+ ++Y +++ GF+  E +
Sbjct: 231 QIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVM-GFLCKEKR 289

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
           +  +      ML+     PD V +N  +  LSK G  D+AL+      E +         
Sbjct: 290 IKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRF-------- 341

Query: 365 SLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
                                     D V Y+A++  FC+ G  ++A ++ N M  KG  
Sbjct: 342 ------------------------RVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCI 377

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           PD  ++  ++ GLC  RK+D+A  + + +  +    N   +TA+++ L + G   +A ++
Sbjct: 378 PDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREM 437

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
              +  + +  + ++Y+V + G    G++ EA  L  +M      P      +++ S C+
Sbjct: 438 MNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQ 497

Query: 545 ERNIKMVKRLLQDVID 560
           E  +   KR ++  ++
Sbjct: 498 EEKVDEAKRFMEQCLN 513



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 89/388 (22%), Positives = 168/388 (43%), Gaps = 52/388 (13%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNL 195
           E  +EM   G  P+      V++ L +  +VD   K+L++       PN +S+   L  L
Sbjct: 366 EIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGL 425

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG---TS 252
           CK  +    ++++ M     + PN   + +L++ F + G+ +EA  L+  MI  G   T 
Sbjct: 426 CKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTP 485

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
           + +N   +LI    +  ++D A    E+ + NGC+ NVV +T++I GF +      A S 
Sbjct: 486 VEIN---LLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSL 542

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
           LD +      PD+V +  +ID L K G  ++A  +   +L + L+P              
Sbjct: 543 LDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTP------------ 590

Query: 373 SGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
                               V Y  ++  +C+ G     +KL   ML +      Y+ V 
Sbjct: 591 --------------------VTYRTVIHQYCRMGRVEDLLKLLEKMLSRQECRTAYNQV- 629

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG----RCHKAIQLFRRA 488
            +  LC    +++A  +   ++     ++A+    +++  +  G      + A ++F R 
Sbjct: 630 -IEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRN 688

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
           ++    L      V+ + +LE G++EEA
Sbjct: 689 LIPDLKL---CEKVSKKLMLE-GKSEEA 712



 Score = 47.4 bits (111), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 29/156 (18%), Positives = 69/156 (44%), Gaps = 6/156 (3%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD-- 171
           GC +    F   +  + + +     L   D+M      P+      ++D L K GR++  
Sbjct: 515 GCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEA 574

Query: 172 --LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
             L +K+L+   +P  +++   +   C++  V ++  ++  M+ +        +  ++  
Sbjct: 575 TKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQECRTA--YNQVIEK 632

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF 265
            C  G + +AY+LLG ++   + +  N   +LI+ +
Sbjct: 633 LCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESY 668


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/388 (25%), Positives = 188/388 (48%), Gaps = 11/388 (2%)

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW--- 278
           + ++L++ + K GR+ +A +++ +M   G + S+     L+   + L R D    LW   
Sbjct: 49  VLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALL---KDLLRADAMALLWKVR 105

Query: 279 EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
           E MV  G SP+V TY++LI+ + + + F  A   L  +   G   + V +NVLI  L + 
Sbjct: 106 EFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRS 165

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF----SLLPKLVCGLEVEADLVV 394
           G+ ++A      + +  LVPD +T+ +L++ +C S R     +LL ++ C  E++ ++VV
Sbjct: 166 GAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCA-ELKPNVVV 224

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           Y  L+  F + G  ++A K+   M+  G  P+  ++  L+RGLC   ++D A  + + +V
Sbjct: 225 YANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMV 284

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
            ++   +   +  I++          A +L           +V +Y++ I GL + G  E
Sbjct: 285 RDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPE 344

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLT 574
           +A  L  +M    + PNA+ Y  ++  +C+E N+ +   +   +    +  D +    L 
Sbjct: 345 KASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLI 404

Query: 575 KFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
             + K      +     +M   GL+P+E
Sbjct: 405 FGLSKVGRVEESTKYFAQMQERGLLPNE 432



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/488 (20%), Positives = 218/488 (44%), Gaps = 7/488 (1%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET 180
           T+   +  Y +   +    +   EM   G   NT   N+++  L + G V+      K+ 
Sbjct: 119 TYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDM 178

Query: 181 Q----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
           +    +P+  ++   +  LCK    +  K ++  M      PNV ++  L++ F + G  
Sbjct: 179 EDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNA 238

Query: 237 AEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSL 296
            EA++++  M+  G   +   +  L+ G  ++ ++D A  L ++MV++   P+ +TY  +
Sbjct: 239 DEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLI 298

Query: 297 IKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
           I+G         AF  L  +E+ G +P++  ++++I  L + G  + A D+ + +    L
Sbjct: 299 IEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGL 358

Query: 357 VPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVK 413
            P+++ +  L+S  C  G  SL  ++   +  + V  DL  YN+L+    K G   ++ K
Sbjct: 359 KPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTK 418

Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
            +  M ++G  P+ +++ GL+ G      ++ A  + Q ++      N  ++  +++   
Sbjct: 419 YFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYF 478

Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
           ++    K    F+  + +   LD   Y + I  L   G  E A+ + S+++     P+ +
Sbjct: 479 KSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVH 538

Query: 534 TYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEM 593
            Y  ++   CK  + +    +L ++    ++ +      L   + K    S A N    +
Sbjct: 539 VYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSI 598

Query: 594 CNLGLIPD 601
              GL+P+
Sbjct: 599 LAKGLVPN 606



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 123/570 (21%), Positives = 231/570 (40%), Gaps = 60/570 (10%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRG--------- 132
           DV ++  +I    ++   F+T + ++ E+   GC +   T+ + +    R          
Sbjct: 116 DVYTYSTLIEAYCKVR-EFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGF 174

Query: 133 ----EMYGMVLEAF----------------------DEMGRFGFTPNTFARNIVMDVLFK 166
               E YG+V + F                      DEM      PN      ++D   +
Sbjct: 175 KKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMR 234

Query: 167 IGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
            G  D   K++KE       PN ++++  +  LCK+  +     ++  MVR    P+   
Sbjct: 235 EGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTIT 294

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           + +++    +     +A++LL  M   G S +V  ++++I G  +    + A  L E+M 
Sbjct: 295 YNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMT 354

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
             G  PN   Y  LI G+      S+A    D +      PDL  +N LI  LSK+G  +
Sbjct: 355 TKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVE 414

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALL 399
           ++   +  + E  L+P+ +T+  L+     +G      +LV  +    ++ + V+Y  LL
Sbjct: 415 ESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLL 474

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
             + K+    +    + +MLD+G   DN  +  L+  L  +  ++ A  V   I  N   
Sbjct: 475 ESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSV 534

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            + HV+++++  L +     KA  +      +    ++V Y   I GL + G    A  +
Sbjct: 535 PDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNV 594

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLT----- 574
           ++ +    + PN  TY  ++   CK  +I     L  +++   I  D      LT     
Sbjct: 595 FNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSS 654

Query: 575 ------------KFIFKFHSSSSAVNQLVE 592
                       +   + H+S S+ N LV+
Sbjct: 655 AGDLEQAMFLIEEMFLRGHASISSFNNLVD 684



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 105/451 (23%), Positives = 210/451 (46%), Gaps = 7/451 (1%)

Query: 158 NIVMDVLFKIGRVDLGIKV---LKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           ++++D   K GRV    +V   +++  L P+    N  L +L + + ++ +  V   MV 
Sbjct: 51  DVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVG 110

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G  P+V  +  L+  +CK+     A ++L  M   G  L+   + VLI G  R   ++ 
Sbjct: 111 AGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEE 170

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A    + M   G  P+  TY +LI G  +++  + A + LD +      P++V +  LID
Sbjct: 171 AFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLID 230

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG---RFSLLPKLVCGLEVEA 390
              + G+ D+A  +   ++   + P+  T+ +L+  +C  G   R SLL K +       
Sbjct: 231 GFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRP 290

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           D + YN ++    +      A +L + M + G +P+ Y++  ++ GLC + + ++A ++ 
Sbjct: 291 DTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLL 350

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
           + +       NA V+  ++      G    A ++F +        D+  Y   I GL + 
Sbjct: 351 EEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKV 410

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
           GR EE+   ++QM+   + PN +TY  ++  + K  +++  ++L+Q ++D  ++ +    
Sbjct: 411 GRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIY 470

Query: 571 IRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           I L +  FK        +    M + G++ D
Sbjct: 471 IDLLESYFKSDDIEKVSSTFKSMLDQGVMLD 501



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 126/512 (24%), Positives = 215/512 (41%), Gaps = 31/512 (6%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           +G  E    ++ E+   G    A  +   +  Y R     +  E FD+M +    P+ + 
Sbjct: 340 SGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYC 399

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N ++  L K+GRV+   K   + Q    LPN  +++  +    K  D+ + + ++  M+
Sbjct: 400 YNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRML 459

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
             G  PN  ++  LL  + K   I +       M+  G  L    + +LI        ++
Sbjct: 460 DTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNME 519

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A  +  ++ +NG  P+V  Y+SLI G  +      AF  LD +  +G  P++V +N LI
Sbjct: 520 AAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALI 579

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVE 389
           D L K G    A +V++ +L   LVP+  T+ SL+   C  G  S    L   +    + 
Sbjct: 580 DGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGIT 639

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            D  VY+ L +    AG   QA+ L   M  +G    + SF  L+ G C   K+ E + +
Sbjct: 640 PDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASIS-SFNNLVDGFCKRGKMQETLKL 698

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF---RRAIVE--------------- 491
              I+      NA     I+  L EAG+  +   +F   ++   E               
Sbjct: 699 LHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMIN 758

Query: 492 --KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
             K PLDVV     IR   + G  ++A +L   +   + P    +Y  ++ + C++  + 
Sbjct: 759 QGKIPLDVVDDM--IRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLS 816

Query: 550 MVKRLLQDVIDARIELDYHTSIRLTKFIFKFH 581
               LL++ +D R  L       L  F F+ H
Sbjct: 817 EALNLLKE-MDKRGNLQPTLVALLGIFWFRRH 847



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/423 (21%), Positives = 186/423 (43%), Gaps = 14/423 (3%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLN 199
           +M R    P+T   N++++  F+        ++L E +     PN  +++I +  LC+  
Sbjct: 282 QMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSG 341

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
           +     D++  M  KG  PN  ++  L++ +C+ G ++ A ++   M  +     +  + 
Sbjct: 342 EPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYN 401

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
            LI G  ++ R++ +   + +M + G  PN  TY+ LI G+++      A   +  +   
Sbjct: 402 SLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDT 461

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
           G  P+ V +  L++   K    +     +  +L+  ++ D+  +  L+  +  SG     
Sbjct: 462 GLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAA 521

Query: 380 PKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
            +++  +E      D+ VY++L+S  CK     +A  + + M  KG  P+   +  L+ G
Sbjct: 522 FRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDG 581

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
           LC +  I  A NV+  I+      N   +T+++D   + G    A  L+   +      D
Sbjct: 582 LCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPD 641

Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQM---KHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
              Y+V   G    G  E+A  L  +M    H ++     ++  ++  FCK   ++   +
Sbjct: 642 AFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASIS----SFNNLVDGFCKRGKMQETLK 697

Query: 554 LLQ 556
           LL 
Sbjct: 698 LLH 700


>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/397 (24%), Positives = 189/397 (47%), Gaps = 11/397 (2%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDV 207
           P+ FA N V+    K+ +++   +VL   +    LP+ +++NI + +LC    +     V
Sbjct: 145 PDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTV 204

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
           +  ++     P V  + IL+      G I EA +LL  M+  G    +  +  +I G  +
Sbjct: 205 LDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCK 264

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
              ++ A  L   +   GC P+V++Y  L++ F+    +      +  + S G  P+ V 
Sbjct: 265 EGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVT 324

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE 387
           +++LI  L + G  D+A+ V   ++E +L PD+Y++  L+S +C  GR  L   ++  + 
Sbjct: 325 YSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMI 384

Query: 388 VEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL--CGARK 442
                 D+V YN +L+  CK G  NQA++++N +   G  P+  S+  ++  L  CG R 
Sbjct: 385 SNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRS 444

Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTV 502
              A+ +   ++      +   + +++  L   G   +AI L        +   V+SY +
Sbjct: 445 --RALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNI 502

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
            + GL +  R ++A  ++++M      PN  TY +++
Sbjct: 503 VLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLI 539



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/436 (22%), Positives = 196/436 (44%), Gaps = 8/436 (1%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLG---IKVLKETQLPNFLSFNIALCNLCKLNDVSNVK 205
           G+TP+      ++   F    ++     +++L+    P+  ++N  +   CK+N +    
Sbjct: 108 GYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHTEPDVFAYNAVISGFCKVNQIEAAT 167

Query: 206 DVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF 265
            V+  M  +GF P++  + I++   C   ++  A  +L  ++      +V  +T+LI+  
Sbjct: 168 QVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEAT 227

Query: 266 RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL 325
                ++ A  L E+M+  G  P++ TY ++I+G  +  M   A   +  L S+G  PD+
Sbjct: 228 IVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDV 287

Query: 326 VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPK 381
           + +N+L+      G +D+   +   +      P+  T+  L+S++C  GR     S+L K
Sbjct: 288 ISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVL-K 346

Query: 382 LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
           ++   E+  D   Y+ L+S  CK G  + A+ + + M+  G  PD  ++  +L  LC   
Sbjct: 347 VMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNG 406

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYT 501
             ++A+ ++  +       N   +  ++  L   G   +A+ +    I +    D ++Y 
Sbjct: 407 NANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYN 466

Query: 502 VAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
             I  L   G  EEA  L   M+     P   +Y ++LL  CK R I     +  ++I+ 
Sbjct: 467 SLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEK 526

Query: 562 RIELDYHTSIRLTKFI 577
               +  T I L + I
Sbjct: 527 GCRPNETTYILLIEGI 542



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 96/423 (22%), Positives = 201/423 (47%), Gaps = 14/423 (3%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV +++ +IS   ++  + E    ++  +   G +    T+ + +         G+ L  
Sbjct: 146 DVFAYNAVISGFCKVN-QIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTV 204

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
            D++      P      I+++     G ++  +K+L+E      LP+  ++N  +  +CK
Sbjct: 205 LDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCK 264

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              V    ++I  +  KG  P+V  + ILL  F   G+  E  +L+  M + G   +   
Sbjct: 265 EGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVT 324

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +++LI    R  R+D A  + + M++   +P+  +Y  LI    +     +A   +D + 
Sbjct: 325 YSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMI 384

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
           S G  PD+V +N ++  L K G+ + AL++++ L  +   P+  ++ +++S +   G  S
Sbjct: 385 SNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRS 444

Query: 378 ----LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
               ++P ++    ++ D + YN+L+S  C+ G   +A+ L + M   GF P   S+  +
Sbjct: 445 RALGMVPAMI-SKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIV 503

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ----LFRRAI 489
           L GLC  R+ID+AI ++  ++      N   +  +++ +  AG   +A++    LF R +
Sbjct: 504 LLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDV 563

Query: 490 VEK 492
           + +
Sbjct: 564 ISQ 566



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 90/368 (24%), Positives = 181/368 (49%), Gaps = 9/368 (2%)

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           +V KG+ P+V +   L+  F     I +A +++ ++ +  T   V A+  +I GF ++ +
Sbjct: 104 LVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILES-HTEPDVFAYNAVISGFCKVNQ 162

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           ++ A  +  +M   G  P++VTY  +I      +   +A + LD L  +   P ++ + +
Sbjct: 163 IEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTI 222

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE--- 387
           LI+     G  ++A+ + + +L   L+PD YT+ +++  +C  G      +L+  L    
Sbjct: 223 LIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKG 282

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
            E D++ YN LL  F   G  ++  KL   M  +G  P+  ++  L+  LC   +IDEAI
Sbjct: 283 CEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAI 342

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
           +V + ++      + + +  ++  L + GR   AI +    I      D+V+Y   +  L
Sbjct: 343 SVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAAL 402

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF--CKERN--IKMVKRLLQDVIDARI 563
            + G   +A  ++++++ +  PPN  +Y  M+ +   C +R+  + MV  ++   ID   
Sbjct: 403 CKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPD- 461

Query: 564 ELDYHTSI 571
           E+ Y++ I
Sbjct: 462 EITYNSLI 469



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 65/300 (21%), Positives = 125/300 (41%), Gaps = 33/300 (11%)

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           +A  F+ +  FL+ L ++G+ PD++    LI                 G    K +  + 
Sbjct: 90  KAGKFNESLYFLECLVNKGYTPDVILCTKLIK----------------GFFNFKNIEKAS 133

Query: 362 TFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
               +L +                   E D+  YNA++S FCK      A ++ N M  +
Sbjct: 134 RVMEILES-----------------HTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKAR 176

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
           GF PD  ++  ++  LC  RK+  A+ V   ++++N       +T +++  I  G  ++A
Sbjct: 177 GFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEA 236

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
           ++L    +      D+ +Y   IRG+ + G  E A  L + +      P+  +Y ++L +
Sbjct: 237 MKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRA 296

Query: 542 FCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           F  +      ++L+ ++     E +  T   L   + +F     A++ L  M    L PD
Sbjct: 297 FLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPD 356


>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1023

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/407 (25%), Positives = 188/407 (46%), Gaps = 8/407 (1%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNL 195
           E F+ + +    PN    + ++D   K+G+++L   VL    KE   PN ++F+  +   
Sbjct: 447 EVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGY 506

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
            K   +S   DV+  MV++   PN  ++ IL++ + K G    A      M +     S 
Sbjct: 507 AKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESN 566

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
             + +L++  +R+ R+D A  L   M   G  P++V Y SLI G+ +      A S +  
Sbjct: 567 VIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQE 626

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
           ++ +    D+V +N LI  L ++G YD    V   ++EL L PD  T+ ++++T C+ G+
Sbjct: 627 MKEKNIRFDVVAYNALIKGLLRLGKYDPRY-VCSRMIELGLAPDCITYNTIINTYCIKGK 685

Query: 376 FSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
                 ++  ++   +  + V YN L+   CK G   +A    + ML   F P   +   
Sbjct: 686 TEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKF 745

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           L++    + K D+ + +++ +V +   ++  V+  ++      G   KA  +    +   
Sbjct: 746 LVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRG 805

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
              D+V+Y   IRG   G   E+A   YSQM    + PN  TY  +L
Sbjct: 806 ISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLL 852



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 113/489 (23%), Positives = 204/489 (41%), Gaps = 51/489 (10%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G+ E    ++ ++ +        TF   +  Y +  M    ++   EM +    PNT   
Sbjct: 475 GKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVY 534

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQLPNF----LSFNIALCNLCKLNDVSNVKDVIGMMVR 213
            I++D  FK G  D+     KE +        + F+I L NL ++  +   + +I  M  
Sbjct: 535 AILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYS 594

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           KG  P++  +  L++ + K G    A  ++  M        V A+  LI G  RL + D 
Sbjct: 595 KGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYD- 653

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
             Y+  +M++ G +P+ +TY ++I  +        A   L+ ++S G  P+ V +N+LI 
Sbjct: 654 PRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIG 713

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVC-GLEV 388
            L K G+ + A    D +L ++ VP   T   L+     S +      +  KLV  GLE+
Sbjct: 714 GLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLEL 773

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
              L VYN L++ FC+ G   +A  + + M+ +G + D  ++  L+RG C    +++A+ 
Sbjct: 774 S--LTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALK 831

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAG-------------------------------- 476
            Y  + ++  A N   +  ++  L  AG                                
Sbjct: 832 TYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILV 891

Query: 477 -------RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
                     K I L    I + +   + +Y V I    + G+  EA  L + +      
Sbjct: 892 SGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRI 951

Query: 530 PNAYTYRVM 538
           PN++TY ++
Sbjct: 952 PNSFTYDIL 960



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/421 (21%), Positives = 194/421 (46%), Gaps = 20/421 (4%)

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
           +P+ ++ +  L   C+   ++    +   M   G  PN   +  ++N   K GR+ EA+ 
Sbjct: 353 MPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFN 412

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           L   M+  G S  +   T ++DG  ++ +   A  ++E +++   +PN VTY++L+ G+ 
Sbjct: 413 LQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYC 472

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           +     +A   L  +E E   P+++  + +I+  +K G    A+DV   +++  ++P++ 
Sbjct: 473 KLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTI 532

Query: 362 TFCSLLSTVCLSGRFSLLP---KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
            +  L+     +G   +     K +    +E   V+++ LL+   + G  ++A  L   M
Sbjct: 533 VYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDM 592

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR- 477
             KG  PD  ++  L+ G         A+++ Q +   N   +   + A++  L+  G+ 
Sbjct: 593 YSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKY 652

Query: 478 -----CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
                C + I+L           D ++Y   I      G+TE+A  + ++MK   + PNA
Sbjct: 653 DPRYVCSRMIEL-------GLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNA 705

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVE 592
            TY +++   CK   ++      +  +D  + +++  +    KF+ K +S S   +++++
Sbjct: 706 VTYNILIGGLCKTGAVEKA----ESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQ 761

Query: 593 M 593
           +
Sbjct: 762 I 762



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 105/505 (20%), Positives = 209/505 (41%), Gaps = 46/505 (9%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           RF T       +  +G V     +   L  +    +   V   + +M   G  P+ F+ N
Sbjct: 74  RFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVN 133

Query: 159 IVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYP 218
           +++  L K+G +DL +  L+                    NDV ++ +V           
Sbjct: 134 VLVHSLCKVGDLDLALGYLRN-------------------NDVVDIDNVT---------- 164

Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
               +  ++  FC+ G + + + LL  M+  G         +L+ G+ R+  +  A ++ 
Sbjct: 165 ----YNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVM 220

Query: 279 EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
             +V  G + +V+   +LI G+ EA + S A   ++         D+V +N L+    K 
Sbjct: 221 YNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKT 280

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNAL 398
           G    A  +++ +L      D      +++   +               ++  LV Y  L
Sbjct: 281 GDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKN-------------LQPTLVTYTTL 327

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           ++ +CK     ++  LY  M+  G  PD  +   +L G C   K+ EA  +++ +     
Sbjct: 328 IAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGL 387

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
             N   +  I++ L ++GR  +A  L  + +V     D+V+ T  + GL + G+T+EA  
Sbjct: 388 DPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEE 447

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
           ++  +  + + PN  TY  +L  +CK   +++ + +LQ +    +  +  T   +     
Sbjct: 448 VFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYA 507

Query: 579 KFHSSSSAVNQLVEMCNLGLIPDEM 603
           K    S AV+ L EM    ++P+ +
Sbjct: 508 KKGMLSKAVDVLREMVQRNVMPNTI 532



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/331 (21%), Positives = 133/331 (40%), Gaps = 20/331 (6%)

Query: 293 YTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
           + +LI+ ++    FS A +    + + G  P L F N L+   +  G       +Y  +L
Sbjct: 62  FCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDML 121

Query: 353 ELKLVPDSYTFCSLLSTVCLSGRFSL-LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQA 411
              +VPD ++   L+ ++C  G   L L  L     V+ D V YN ++  FC+ G  +Q 
Sbjct: 122 FCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVVDIDNVTYNTVIWGFCQKGLVDQG 181

Query: 412 VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
             L + M+ +G   D+ +   L++G C    +  A  V   +V      +      ++D 
Sbjct: 182 FGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDG 241

Query: 472 LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY----------- 520
             EAG   +A +L   +      +D+V+Y   ++   + G    A  L+           
Sbjct: 242 YCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDED 301

Query: 521 --------SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
                   +Q +   + P   TY  ++ ++CK   ++    L + +I   I  D  T   
Sbjct: 302 RLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSS 361

Query: 573 LTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           +     +    + A     EM  +GL P+ +
Sbjct: 362 ILYGFCRHGKLTEAAVLFREMYEMGLDPNHV 392



 Score = 41.2 bits (95), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 44/216 (20%), Positives = 84/216 (38%), Gaps = 28/216 (12%)

Query: 86  FDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEM 145
           ++ +I+V  RL G     + ++ E+ + G      T+   +R Y  G      L+ + +M
Sbjct: 778 YNTLITVFCRL-GMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQM 836

Query: 146 GRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVK 205
              G  PN    N ++      G  + G+      +    +S                  
Sbjct: 837 FVDGIAPNITTYNTLLG-----GLSNAGLMEEMMEETEKLVS------------------ 873

Query: 206 DVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF 265
                M  +G  PN   ++IL++ + ++G   +   L   MIT G   ++  + VLI  +
Sbjct: 874 ----EMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDY 929

Query: 266 RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
            +  ++  A  L   ++  G  PN  TY  L  G++
Sbjct: 930 AKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWL 965


>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
 gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/395 (24%), Positives = 176/395 (44%), Gaps = 38/395 (9%)

Query: 174 IKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKM 233
           +++L     PN  +FN+ +  LCK   V + + +   + + G  P    F  L+N +CK 
Sbjct: 221 LEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKS 280

Query: 234 GRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTY 293
           G + E ++L  +M        V  ++ LIDG  +  +L+ A +L+++M   G  PN VT+
Sbjct: 281 GNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTF 340

Query: 294 TSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE 353
           T+LI G  +     +A      + ++G   DLV +N LID L K G + +A      + +
Sbjct: 341 TTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTK 400

Query: 354 LKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVK 413
             L+PD +T+ +LL   C  G   L                                A++
Sbjct: 401 RGLIPDKFTYTTLLDGSCKEGDLEL--------------------------------ALE 428

Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
           +   M+ +G   DN +F  ++ GLC   KI +A    + ++      +   +T ++D   
Sbjct: 429 MRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFC 488

Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
           + G      +L +    + +   V++Y V + GL + G+ + A +L + M ++ V P+  
Sbjct: 489 KKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDI 548

Query: 534 TYRVMLLSFCKE------RNIKMVKRLLQDVIDAR 562
           TY ++L   CK       +N+K    L+ D    R
Sbjct: 549 TYNILLQGHCKHGKLGDFQNVKTEMGLVSDYASYR 583



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 115/503 (22%), Positives = 217/503 (43%), Gaps = 65/503 (12%)

Query: 67  LSFFIWCAKQRDYFHDVQSFDHMIS--VVTRLTGRFETVRGIVGELARVGCVIKAQTFLL 124
           LSFF + +    + H VQS+  M+   +  R+  + E++   V  ++R G    +  F  
Sbjct: 94  LSFFDFLSSYPTFSHTVQSYCSMVHFLIAHRMNQQAESLLHFV--VSRKGKGSASSVFAS 151

Query: 125 FLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPN 184
            L                      G   ++F  + +M V  + G V   I+  + T+  N
Sbjct: 152 ILETK-------------------GTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHN 192

Query: 185 F-LSFNIALCNLCKLNDVSNVKDVIGM---MVRKGFYPNVRMFEILLNCFCKMGRIAEAY 240
             + FN   C L ++  +S+    +     ++  G+ PNV  F +L+N  CK G++ +A 
Sbjct: 193 LKIPFNGCKCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDA- 251

Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
           QL+                                  ++++ + G  P  V++ +LI G+
Sbjct: 252 QLI----------------------------------FDEIRKTGLQPTAVSFNTLINGY 277

Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
            ++      F    ++E     PD+  ++ LID L K    +DA  ++  + +  LVP+ 
Sbjct: 278 CKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPND 337

Query: 361 YTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
            TF +L++  C +GR  L  ++   +    ++ADLV+YN L+   CK G+  +A K    
Sbjct: 338 VTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGE 397

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           M  +G  PD +++  LL G C    ++ A+ + + +V     ++    TAI+  L   G+
Sbjct: 398 MTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGK 457

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
              A +  R  +      D  +YT+ + G  + G  +  + L  +M+     P   TY V
Sbjct: 458 IVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNV 517

Query: 538 MLLSFCKERNIKMVKRLLQDVID 560
           ++   CK+  +K    LL  +++
Sbjct: 518 LMNGLCKQGQVKNADMLLNAMLN 540



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 128/273 (46%), Gaps = 4/273 (1%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
           F EM   G  PN      +++   K GRVDL +++ ++        + + +N  +  LCK
Sbjct: 325 FKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCK 384

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
                  +  +G M ++G  P+   +  LL+  CK G +  A ++   M+  G  L   A
Sbjct: 385 GGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVA 444

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T +I G  R  ++  A     +M++ G  P+  TYT ++ GF +     + F  L  ++
Sbjct: 445 FTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQ 504

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
           S+GH P ++ +NVL++ L K G   +A  + + +L L +VPD  T+  LL   C  G+  
Sbjct: 505 SDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKLG 564

Query: 378 LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQ 410
               +   + + +D   Y +LL    KA    Q
Sbjct: 565 DFQNVKTEMGLVSDYASYRSLLHELSKASKDRQ 597



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 90/398 (22%), Positives = 178/398 (44%), Gaps = 13/398 (3%)

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           KG   +  +F+ L++ + + G +++A Q   L       +  N    L++   ++    +
Sbjct: 156 KGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFNGCKCLLERMIKMSSPMV 215

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A   + +++ +G  PNV T+  L+    +      A    D +   G  P  V  N LI+
Sbjct: 216 ALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLIN 275

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF---SLLPKLVCGLEVEA 390
              K G+ ++   +   + E ++ PD +T+ +L+  +C   +    + L K +C   +  
Sbjct: 276 GYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVP 335

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           + V +  L++  CK G  + A+++Y  M  KG   D   +  L+ GLC      EA    
Sbjct: 336 NDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFV 395

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
             +       +   +T ++D   + G    A+++ +  + E   LD V++T  I GL   
Sbjct: 396 GEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRD 455

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
           G+  +A     +M    + P+  TY +++  FCK+ ++KM  +LL++     ++ D H  
Sbjct: 456 GKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKE-----MQSDGHIP 510

Query: 571 IRLTKFIF-----KFHSSSSAVNQLVEMCNLGLIPDEM 603
             +T  +      K     +A   L  M NLG++PD++
Sbjct: 511 GVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDI 548



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/208 (19%), Positives = 98/208 (47%), Gaps = 1/208 (0%)

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLD-KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
           +LL +         A  ++ ++L+ KG    ++ F  L+        + +AI  ++    
Sbjct: 131 SLLHFVVSRKGKGSASSVFASILETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKK 190

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
           +N  +  +    +++R+I+      A++ +   +   YP +V ++ V +  L + G+ ++
Sbjct: 191 HNLKIPFNGCKCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKD 250

Query: 516 AYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTK 575
           A +++ +++   + P A ++  ++  +CK  N++   RL   + + R+  D  T   L  
Sbjct: 251 AQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALID 310

Query: 576 FIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
            + K      A +   EMC+ GL+P+++
Sbjct: 311 GLCKECQLEDANHLFKEMCDRGLVPNDV 338


>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 712

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 128/549 (23%), Positives = 231/549 (42%), Gaps = 65/549 (11%)

Query: 40  THQDFPIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGR 99
           TH+    ++A      +L      +++LSFF W             F H + +       
Sbjct: 101 THEQVITVVA------SLAQEAGSVVSLSFFNWVI-------GFSKFRHFMRLYIVCATT 147

Query: 100 FETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNI 159
           F     +      + C++++     F  I    E   MV+E    M   G        N 
Sbjct: 148 FLNNDNLDRATEVMQCMVRS-----FSEIGKLKEAVNMVIE----MQNHGLVLKARILNF 198

Query: 160 VMDVLFKIGRVDLGIKVLKE----TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG 215
           V+DV   +G VD   KV  E      +P+  S+ + +   C++  +S+V   +  M+ +G
Sbjct: 199 VIDVALALGFVDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERG 258

Query: 216 FY-----------------------------------PNVRMFEILLNCFCKMGRIAEAY 240
           +                                    PN+  F  L+N  CK+G I +A+
Sbjct: 259 YAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAF 318

Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQ-NGCSPNVVTYTSLIKG 299
           ++L  M+  G   +V   T LIDG  +    + A  L+ K+V+ +   PNV TYT +I G
Sbjct: 319 EMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMING 378

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
           + + +  + A   L  ++ +G  P+   +  LID   K G++  A ++ D + +    P+
Sbjct: 379 YCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPN 438

Query: 360 SYTFCSLLSTVCLSGRFSLLPKLVC-GLE--VEADLVVYNALLSYFCKAGFPNQAVKLYN 416
            +T+ +++  +C  GRF    KL+  GL+  + AD V Y  L+S FC+     QA+ +++
Sbjct: 439 IFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFS 498

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
            M   G  PD +++  L+   C  +K++E+  +++  V          +T+++      G
Sbjct: 499 RMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDG 558

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
               AI+ F +        D ++Y   I GL    + +EA  LY  M    + P   T  
Sbjct: 559 HISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRV 618

Query: 537 VMLLSFCKE 545
            +   +CK+
Sbjct: 619 TLAYEYCKQ 627



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/418 (21%), Positives = 190/418 (45%), Gaps = 7/418 (1%)

Query: 193 CNLCKLNDVSNVKDVIGMMVR---KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
           C +   +++  +K+ + M++     G     R+   +++    +G +  A ++   M+  
Sbjct: 163 CMVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDR 222

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
                  ++ +++ G+ R+ R+       + M++ G + +  T T +I  F E    + A
Sbjct: 223 AVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRA 282

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
           F +       G  P+L+  + LI+ L K+GS   A ++ + ++     P+ YT  +L+  
Sbjct: 283 FWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDG 342

Query: 370 VCLSG----RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
           +C  G     F L  KLV     + ++  Y  +++ +CK    N+A  L   M ++G  P
Sbjct: 343 LCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVP 402

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           +  ++  L+ G C A     A  +   +       N   + AI+D L + GR  +A +L 
Sbjct: 403 NTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLL 462

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
           RR +      D V+YT+ I         ++A  ++S+M  + + P+ +TY V++ +FC++
Sbjct: 463 RRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQ 522

Query: 546 RNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           + ++  ++L ++ +   +     T   +     +    SSA+    +M + G  PD +
Sbjct: 523 KKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSI 580



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 120/286 (41%), Gaps = 4/286 (1%)

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCKLND 200
           M   G  PNT     ++D   K G      +++    KE   PN  ++N  +  LCK   
Sbjct: 395 MKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGR 454

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
                 ++   ++ G + +   + IL++ FC+     +A  +   M  +G    ++ + V
Sbjct: 455 FPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNV 514

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           LI  F R ++++ +  L+E+ V  G  P   TYTS+I G+      S A  F   +   G
Sbjct: 515 LIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYG 574

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
             PD + +  LI  L      D+A  +Y+ +++  L P   T  +L    C  G  +   
Sbjct: 575 CKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAM 634

Query: 381 KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
            ++  LE +  +   N L+   C       A   ++ +LDK    D
Sbjct: 635 IILERLEKKLWIRTVNTLIRKLCSEKKVGVAALFFHKLLDKDLNVD 680


>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
 gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
          Length = 694

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 103/422 (24%), Positives = 191/422 (45%), Gaps = 9/422 (2%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK-----ETQLPNFLSFNIAL 192
            LE FDEM   G  P+    NI++D  FK G    G ++ +         PN +++N+ +
Sbjct: 203 ALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMI 262

Query: 193 CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
             LCK+       ++   M +     ++  +  L+   C +G +  A ++   M+     
Sbjct: 263 NGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVV 322

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
           + V  +  L++GF R  ++  +  LW  M +  C  NVV+Y   I+G  E +    A S 
Sbjct: 323 VDVVTYNALLNGFCRAGKIKESFELWVMMGKENCH-NVVSYNIFIRGLFENRKVEEAISV 381

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
            ++L   G   D   + VLI  L K G  + AL +     +     D++ + S++  +  
Sbjct: 382 WELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSK 441

Query: 373 SGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
            GR      +V  ++    E    V N L++ F +A    +A+  +  M  KG +P   S
Sbjct: 442 QGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVS 501

Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
           +  L+ GLC A +  +A +  + ++  +   +   ++ ++D L +  +   A+ L+R+ +
Sbjct: 502 YNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVL 561

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
           V+    DV  + + + GL   G+ E+A +LYS MK     PN  T+  ++    K R  +
Sbjct: 562 VKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECE 621

Query: 550 MV 551
           M 
Sbjct: 622 MA 623



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 112/518 (21%), Positives = 232/518 (44%), Gaps = 48/518 (9%)

Query: 70  FIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIY 129
           ++W    +D   DV S+  +I+ + + +G   +   +  E+   G V     + + +  +
Sbjct: 174 WMW---SKDLKPDVYSYGTVINGMVK-SGDLVSALEVFDEMFERGLVPDVMCYNIMIDGF 229

Query: 130 WRGEMYGMVLEAFDEMGRFGFT-PNTFARNIVMDVLFKIGRVDLGIKV---LKETQLP-N 184
           ++   Y    E ++ + +     PN    N++++ L K+GR D  +++   +K+ +   +
Sbjct: 230 FKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMD 289

Query: 185 FLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLG 244
             +++  +C LC + +V    +V   MV++    +V  +  LLN FC+ G+I E+++L  
Sbjct: 290 LFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELW- 348

Query: 245 LMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
           +M+      +V ++ + I G    R+++ A  +WE + + G   +  TY  LI G  +  
Sbjct: 349 VMMGKENCHNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNG 408

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGL------------- 351
             + A   L   +  G   D   ++ ++D LSK G  D+AL +   +             
Sbjct: 409 HLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCN 468

Query: 352 ---------------------LELK-LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL--- 386
                                +E K   P   ++ +L++ +C + RFS     V  +   
Sbjct: 469 PLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEK 528

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
           + + D++ Y+ L+   C+    + A+ L+  +L KG  PD      L+ GLC A KI++A
Sbjct: 529 DWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDA 588

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
           + +Y  +  +N   N   H  ++D L +A  C  A  ++       +  D++SY + ++G
Sbjct: 589 LLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKG 648

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
           L   GR  +   L+       + P + T+ +++ +  K
Sbjct: 649 LCSCGRISDGIALFDDALKNGILPTSITWYILVRAVLK 686



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 120/548 (21%), Positives = 239/548 (43%), Gaps = 17/548 (3%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGR--FETVRGIVGELARVGCVIKAQTFL 123
           AL+ F   ++Q  Y H    F   + ++ RL+       V  IV  +    C       L
Sbjct: 26  ALALFDSASRQPGYTHSPHIF---LLILRRLSDPKLVVHVTRIVELIKTQKCKCTEDVVL 82

Query: 124 LFLRIYWRGEMYGMVLEAFDEMGR-FGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ- 181
             L+ Y + +M    L+ F +M   FG  P   + N +++   +   ++     L   + 
Sbjct: 83  TVLKAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNAFIEANLLEKAESFLAYFET 142

Query: 182 ---LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAE 238
              LPN  ++NI +    K       K ++  M  K   P+V  +  ++N   K G +  
Sbjct: 143 VGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVS 202

Query: 239 AYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCS-PNVVTYTSLI 297
           A ++   M   G    V  + ++IDGF +         +WE++V+  C  PNVVTY  +I
Sbjct: 203 ALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMI 262

Query: 298 KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
            G  +   F  +    + ++      DL  ++ LI  L  +G+ D A++VY  +++  +V
Sbjct: 263 NGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVV 322

Query: 358 PDSYTFCSLLSTVCLSGRF--SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLY 415
            D  T+ +LL+  C +G+   S    ++ G E   ++V YN  +    +     +A+ ++
Sbjct: 323 VDVVTYNALLNGFCRAGKIKESFELWVMMGKENCHNVVSYNIFIRGLFENRKVEEAISVW 382

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
             +  +G   D+ ++  L+ GLC    +++A+ + +        ++A  +++IVD L + 
Sbjct: 383 ELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQ 442

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVA--IRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
           GR  +A+ +  +  ++KY  ++  +     I G +   + EEA   + +M+     P   
Sbjct: 443 GRVDEALGIVHQ--MDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVV 500

Query: 534 TYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEM 593
           +Y  ++   CK          ++++++   + D  T   L   + +      A+N   ++
Sbjct: 501 SYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQV 560

Query: 594 CNLGLIPD 601
              GL PD
Sbjct: 561 LVKGLEPD 568



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 102/441 (23%), Positives = 200/441 (45%), Gaps = 13/441 (2%)

Query: 80  FHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFL-LFLRIYWRGEMYGMV 138
           + +V +++ MI+ + ++ GRF+    +   + +  C +   T+  L   +   G + G V
Sbjct: 252 YPNVVTYNVMINGLCKM-GRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAV 310

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV---LKETQLPNFLSFNIALCNL 195
            E + EM +     +    N +++   + G++    ++   + +    N +S+NI +  L
Sbjct: 311 -EVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCHNVVSYNIFIRGL 369

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
            +   V     V  ++ R+G   +   + +L++  CK G + +A ++L      G  L  
Sbjct: 370 FENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDA 429

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGC--SPNVVTYTSLIKGFMEAKMFSIAFSFL 313
            A++ ++DG  +  R+D A  +  +M + GC  SP+V     LI GF+ A     A  F 
Sbjct: 430 FAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCN--PLINGFVRASKLEEAICFF 487

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
             +E++G +P +V +N LI+ L K   + DA      +LE    PD  T+  L+  +C  
Sbjct: 488 REMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQG 547

Query: 374 GRFSL---LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
            +  +   L + V    +E D+ ++N L+   C AG    A+ LY+ M      P+  + 
Sbjct: 548 KKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTH 607

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             L+ GL  AR+ + A  ++  +  N    +   +   +  L   GR    I LF  A+ 
Sbjct: 608 NTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALK 667

Query: 491 EKYPLDVVSYTVAIRGLLEGG 511
                  +++ + +R +L+ G
Sbjct: 668 NGILPTSITWYILVRAVLKLG 688



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 82/390 (21%), Positives = 162/390 (41%), Gaps = 37/390 (9%)

Query: 53  VHSTLLN--CPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGEL 110
            ++ LLN  C +  I  SF +W    ++  H+V S++  I  +     + E    +   L
Sbjct: 327 TYNALLNGFCRAGKIKESFELWVMMGKENCHNVVSYNIFIRGLFE-NRKVEEAISVWELL 385

Query: 111 ARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV 170
            R G    + T+ + +    +       L+   E    G   + FA + ++D L K GRV
Sbjct: 386 RRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRV 445

Query: 171 DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCF 230
           D  + ++ +                               M + G   +  +   L+N F
Sbjct: 446 DEALGIVHQ-------------------------------MDKYGCELSPHVCNPLINGF 474

Query: 231 CKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNV 290
            +  ++ EA      M T G S +V ++  LI+G  +  R   A    ++M++    P++
Sbjct: 475 VRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDM 534

Query: 291 VTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDG 350
           +TY+ L+ G  + K   +A +    +  +G  PD+  HN+L+  L   G  +DAL +Y  
Sbjct: 535 ITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSN 594

Query: 351 LLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL-VCGLE--VEADLVVYNALLSYFCKAGF 407
           + +   +P+  T  +L+  +  +    +   +  C  +   + D++ YN  L   C  G 
Sbjct: 595 MKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGR 654

Query: 408 PNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
            +  + L++  L  G  P + ++  L+R +
Sbjct: 655 ISDGIALFDDALKNGILPTSITWYILVRAV 684



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 60/258 (23%), Positives = 112/258 (43%), Gaps = 6/258 (2%)

Query: 91  SVVTRLT--GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRF 148
           S+V  L+  GR +   GIV ++ + GC +        +  + R       +  F EM   
Sbjct: 434 SIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETK 493

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKE----TQLPNFLSFNIALCNLCKLNDVSNV 204
           G +P   + N +++ L K  R       +KE       P+ +++++ +  LC+   +   
Sbjct: 494 GCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMA 553

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
            ++   ++ KG  P+V M  IL++  C  G+I +A  L   M       ++     L+DG
Sbjct: 554 LNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDG 613

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
             + R  +MA  +W  M +NG  P++++Y   +KG       S   +  D     G  P 
Sbjct: 614 LYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPT 673

Query: 325 LVFHNVLIDCLSKMGSYD 342
            +   +L+  + K+G  D
Sbjct: 674 SITWYILVRAVLKLGPLD 691



 Score = 40.0 bits (92), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 40/199 (20%), Positives = 83/199 (41%), Gaps = 4/199 (2%)

Query: 408 PNQAVKLYNTMLDK-GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
           P  A+ L+++   + G+T   + F+ +LR L   + +     + + I          V  
Sbjct: 23  PKSALALFDSASRQPGYTHSPHIFLLILRRLSDPKLVVHVTRIVELIKTQKCKCTEDVVL 82

Query: 467 AIVDRLIEAGRCHKAIQLFRR--AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
            ++    ++   ++A+  F++   I    P  + SY   +   +E    E+A    +  +
Sbjct: 83  TVLKAYAKSKMPNEALDCFQKMEEIFGCKP-GIRSYNALLNAFIEANLLEKAESFLAYFE 141

Query: 525 HIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSS 584
            + + PN  TY +++    K+R     K LL  +    ++ D ++   +   + K     
Sbjct: 142 TVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLV 201

Query: 585 SAVNQLVEMCNLGLIPDEM 603
           SA+    EM   GL+PD M
Sbjct: 202 SALEVFDEMFERGLVPDVM 220


>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 111/473 (23%), Positives = 217/473 (45%), Gaps = 16/473 (3%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR +    +  E+A    V+   T+ + +  Y         ++   EM   G   N  A 
Sbjct: 267 GRIKDAHQLFDEMASPPDVV---TYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAY 323

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQLPNFL----SFNIALCNLCKLNDVSNVKDVIGMMVR 213
             V+ +L   G+V   ++V+++  +   +     F   +   C+  D++  ++    M +
Sbjct: 324 TSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQK 383

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +G   +   +  L+N  C+ G + EA ++L  M   G  +    +TVLIDG+ ++ ++  
Sbjct: 384 RGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTE 443

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  +  KMVQ   +PNVVTYT+L  G  +      A   L  + S+G   ++  +N LI+
Sbjct: 444 AFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLIN 503

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF----SLLPKLVCGLEVE 389
            L K G+ + A+     + E  L PD YT+ +++  +C S       SLL +++    ++
Sbjct: 504 GLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEML-DKGIK 562

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
             +V YN L++ FC +G      +L   ML+K   P+  ++  L++  C  + +     +
Sbjct: 563 PTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEI 622

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
           Y+G++      N + +  ++    +A    +A+      I + + L   SY   IR L +
Sbjct: 623 YKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNK 682

Query: 510 GGRTEEAYILYSQMK--HIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
             +  EA  L+ +M+   +   P+ Y + +  LSF  E N++    L  ++++
Sbjct: 683 KKKFTEARRLFEKMRKDRLTAEPDVYNFYID-LSF-NEDNLESTLALCDELVE 733



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 109/465 (23%), Positives = 207/465 (44%), Gaps = 57/465 (12%)

Query: 153 NTFARNIVMDVLFKIGRVDLGIKVLKE-TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
           NT + NI++  L   GR+    ++  E    P+ +++ I +   C L+++     ++  M
Sbjct: 252 NTCSYNILLKALCTAGRIKDAHQLFDEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEM 311

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
             +G   N   +  ++   C  G++++A +++  M+  G  L    +T ++ GF R   L
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDL 371

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
             A   +++M + G + + VTYT+LI G   A     A   L  +E +G   D V + VL
Sbjct: 372 AAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVL 431

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV---CGLEV 388
           ID   K+G   +A  V++ +++ ++ P+  T+ +L   +C  G      +L+   C   +
Sbjct: 432 IDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGL 491

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
           E ++  YN+L++  CKAG   QA++    M + G  PD Y++  ++  LC ++++D A +
Sbjct: 492 ELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHS 551

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           + Q                ++D+ I+                      +V+Y V + G  
Sbjct: 552 LLQ---------------EMLDKGIKPT--------------------IVTYNVLMNGFC 576

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI---EL 565
             GR E    L   M    + PN  TY  ++  +C E+N+K    + + ++   +   E 
Sbjct: 577 MSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNEN 636

Query: 566 DY------HTSIRLTKFIFKFHS---------SSSAVNQLVEMCN 595
            Y      H   R  K    FHS         ++S+ N L+ + N
Sbjct: 637 TYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLN 681



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 127/277 (45%), Gaps = 6/277 (2%)

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE 387
           +N+L+  L   G   DA  ++D   E+   PD  T+  ++   C         KL+  + 
Sbjct: 256 YNILLKALCTAGRIKDAHQLFD---EMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMA 312

Query: 388 ---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
              +E + V Y ++++  C  G  + AV++   M+  G   D   F  ++ G C    + 
Sbjct: 313 ARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLA 372

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
            A N +  +     A +   +TA+++ L  AG   +A ++ +    +   +D V+YTV I
Sbjct: 373 AARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLI 432

Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
            G  + G+  EA++++++M    V PN  TY  +    CK+ ++     LL ++    +E
Sbjct: 433 DGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLE 492

Query: 565 LDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           L+  T   L   + K  +   A+  +++M   GL PD
Sbjct: 493 LNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPD 529



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/335 (23%), Positives = 154/335 (45%), Gaps = 14/335 (4%)

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           LD A  L++++ +     N  +Y  L+K    A     A    D + S    PD+V + +
Sbjct: 238 LDEAVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGI 290

Query: 331 LIDCLSKMGSYDDALDVYDGLLE--LKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV 388
           ++     +   + A+ +   +    L+L P +YT  S+++ +C  G+ S   ++V  + +
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYT--SVIALLCDEGQVSDAVRVVEDMVM 348

Query: 389 EA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
                D  V+  ++S FC+ G    A   ++ M  +G   D  ++  L+ GLC A ++ E
Sbjct: 349 HGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKE 408

Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
           A  V Q +      V+A  +T ++D   + G+  +A  +  + + ++   +VV+YT    
Sbjct: 409 AERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSD 468

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
           GL + G    A  L  +M    +  N +TY  ++   CK  N++   R + D+ +A ++ 
Sbjct: 469 GLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKP 528

Query: 566 DYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           D +T   +   + +      A + L EM + G+ P
Sbjct: 529 DVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKP 563



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/218 (19%), Positives = 92/218 (42%), Gaps = 4/218 (1%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLN 199
           +M   G  P+ +    ++  L +   +D    +L+E       P  +++N+ +   C   
Sbjct: 520 DMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSG 579

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
            V   K ++  M+ K  +PN   +  L+  +C    +    ++   M++     + N + 
Sbjct: 580 RVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYN 639

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
           +LI G  + R +  A Y   +M++ G      +Y +LI+   + K F+ A    + +  +
Sbjct: 640 ILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKD 699

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
               +   +N  ID      + +  L + D L+E+ LV
Sbjct: 700 RLTAEPDVYNFYIDLSFNEDNLESTLALCDELVEVTLV 737


>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 477

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/388 (26%), Positives = 177/388 (45%), Gaps = 6/388 (1%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P    F+  L +L K      V  +       G  PN+    IL+NCFC +  I  A+ +
Sbjct: 91  PPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSV 150

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
              ++  G          LI G      +  A Y  +K+V  G   + V+Y +LI G  +
Sbjct: 151 FANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCK 210

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
           A         L  LE     PD+V +  +I CL K     DA D+Y  ++   + P+ +T
Sbjct: 211 AGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFT 270

Query: 363 FCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           + +L+   C+ G     FSLL ++     +  D+  +N L+    K G  ++A+ L+  M
Sbjct: 271 YNTLIYGFCIMGNLKEAFSLLNEMKLK-NINPDVYTFNILIDALGKEGKIDEAISLFEEM 329

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
             K   P+  ++  L+ GLC    ++ AI + + +       + + +T ++D L + GR 
Sbjct: 330 KHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRL 389

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
             A Q F+  +V+ Y L+V +Y V I GL + G   +   L S+M+     P+A T++ +
Sbjct: 390 ENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTI 449

Query: 539 LLS-FCKERNIKMVKRLLQDVIDARIEL 565
           + + F K+ N K  K L + +    +E+
Sbjct: 450 ICALFEKDENDKAEKFLREMIARGLLEV 477



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 144/299 (48%), Gaps = 7/299 (2%)

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           L+++   NG +PN+ T   LI  F      + AFS    +   G+ PD +  N LI  L 
Sbjct: 115 LFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLC 174

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLV 393
             G    AL  +D ++      D  ++ +L++ +C +G    + +L+  LE   V+ D+V
Sbjct: 175 FCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVV 234

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
           +Y  ++   CK      A  LY+ M+ KG +P+ +++  L+ G C    + EA ++   +
Sbjct: 235 MYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEM 294

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
            + N   + +    ++D L + G+  +AI LF     +    ++V+YT  I GL +    
Sbjct: 295 KLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHL 354

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
           E A  L  +MK   + P+ Y+Y ++L + CK   ++  K+  Q ++       YH ++R
Sbjct: 355 ERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVK----GYHLNVR 409



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 90/397 (22%), Positives = 165/397 (41%), Gaps = 36/397 (9%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV----LKETQLPNFL 186
           + + Y  V+  F +    G TPN    NI+++    +  +     V    LK    P+ +
Sbjct: 105 KNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSVFANILKRGYHPDAI 164

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           + N  +  LC   ++         +V +GF  +   +  L+N  CK G      +LL  +
Sbjct: 165 TLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKL 224

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
                   V  +T +I    + +R+  A  L+ +M+  G SPNV TY +LI GF      
Sbjct: 225 EGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNL 284

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
             AFS L+ ++ +   PD+   N+LID L K G  D+A+ +++ +    + P        
Sbjct: 285 KEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFP-------- 336

Query: 367 LSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
                                   ++V Y +L+   CK     +A+ L   M ++G  PD
Sbjct: 337 ------------------------NIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPD 372

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
            YS+  LL  LC   +++ A   +Q +++    +N   +  +++ L +AG     + L  
Sbjct: 373 VYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKS 432

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM 523
           +   +    D +++   I  L E    ++A     +M
Sbjct: 433 KMEGKGCMPDAITFKTIICALFEKDENDKAEKFLREM 469


>gi|297846140|ref|XP_002890951.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297336793|gb|EFH67210.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 689

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 121/477 (25%), Positives = 205/477 (42%), Gaps = 70/477 (14%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP----NFL 186
           RGEM     E F  M + G  P+  A + ++D  FK G + +G K+  +        + +
Sbjct: 191 RGEM-DRAFELFKVMEQRGIAPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVV 249

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
            F+  +    K   ++   DV   M+ +G  PNV  + IL+   C+ GRI EA+ +   +
Sbjct: 250 VFSSTIDVYVKFGYLTTAFDVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGIYCQI 309

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
           +  G   SV  ++ LIDGF +   L     L+E M++ G  P+VV Y  L+ G  +  + 
Sbjct: 310 LKRGLEPSVVTYSSLIDGFCKYGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLCKQGLM 369

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVY------------------ 348
             A  F      +   P++V  N LID   ++   D+AL V+                  
Sbjct: 370 LHALRFSVKTLGQSIRPNVVVFNSLIDGWCRLNRCDEALKVFRLMGIYGIKPDVATITTL 429

Query: 349 -----------DGLL------ELKLVPDSYTFCSLLSTVCLSGRFSL---LPKLVCGLEV 388
                      +GL       ++ L PD+  FC+L+   C + + ++   L  L+   ++
Sbjct: 430 MRVTVMEGRLKEGLFLFFRMFKMGLEPDAVAFCTLMDAFCKNMKPTIGLQLFDLMQRNKI 489

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
            AD+ V N +++   K     +A K +N +L+    PD  ++  ++ G C  R++DEA  
Sbjct: 490 PADIAVCNVVINLLFKGQSVEEASKFFNNLLEGKMEPDIVTYNTMICGYCSLRRLDEAAR 549

Query: 449 VYQGIVMNNPAVNAHVHTAIV---------------------------DRLIEAGRCHKA 481
           +++ +       NA   T ++                           D L + GR  +A
Sbjct: 550 IFEMLKFTPFGPNAVTLTILIHTLCKNSDMDGALRIISPSIISYSIIIDGLCKRGRVDEA 609

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
             +F +AI  K   DVV+Y + IRG  + GR  EA +LY  M    V P+    R +
Sbjct: 610 TNIFHQAIDAKILPDVVAYAILIRGCCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 666



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 114/467 (24%), Positives = 202/467 (43%), Gaps = 50/467 (10%)

Query: 136 GMVLEAFDEMGRFGFTP-NTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNI 190
           G   ++FD++ R G  P    A   V+D LF+ G V    D    V++     + +S N 
Sbjct: 90  GQRSDSFDKLCRGGTVPFGVSAHGFVLDALFRKGEVTKALDFHRLVMERGFRVDIVSCNK 149

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            L  L  ++ +     ++ +++  G  PNV  F  L+N FCK G +  A++L  +M   G
Sbjct: 150 ILKGL-SVDQIEVASRMLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFELFKVMEQRG 208

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMA-----------------------------GYL---- 277
            +  + A++ LIDG+ +   L M                              GYL    
Sbjct: 209 IAPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKFGYLTTAF 268

Query: 278 --WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
             +++M+  G SPNVVTYT LIKG  +      AF     +   G  P +V ++ LID  
Sbjct: 269 DVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGIYCQILKRGLEPSVVTYSSLIDGF 328

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG------RFSLLPKLVCGLEVE 389
            K G+      +Y+ ++++   PD   +  L+  +C  G      RFS+      G  + 
Sbjct: 329 CKYGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLCKQGLMLHALRFSV---KTLGQSIR 385

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            ++VV+N+L+  +C+    ++A+K++  M   G  PD  +   L+R      ++ E + +
Sbjct: 386 PNVVVFNSLIDGWCRLNRCDEALKVFRLMGIYGIKPDVATITTLMRVTVMEGRLKEGLFL 445

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
           +  +       +A     ++D   +  +    +QLF      K P D+    V I  L +
Sbjct: 446 FFRMFKMGLEPDAVAFCTLMDAFCKNMKPTIGLQLFDLMQRNKIPADIAVCNVVINLLFK 505

Query: 510 GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
           G   EEA   ++ +    + P+  TY  M+  +C  R +    R+ +
Sbjct: 506 GQSVEEASKFFNNLLEGKMEPDIVTYNTMICGYCSLRRLDEAARIFE 552



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/234 (23%), Positives = 112/234 (47%), Gaps = 2/234 (0%)

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG--RFSLLPKLVCG 385
           H  ++D L + G    ALD +  ++E     D  +   +L  + +      S +  LV  
Sbjct: 112 HGFVLDALFRKGEVTKALDFHRLVMERGFRVDIVSCNKILKGLSVDQIEVASRMLSLVLD 171

Query: 386 LEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
                ++V +  L++ FCK G  ++A +L+  M  +G  PD  ++  L+ G   A  +  
Sbjct: 172 CGPAPNVVTFCTLINGFCKRGEMDRAFELFKVMEQRGIAPDLIAYSTLIDGYFKAGMLGM 231

Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
              ++   +     ++  V ++ +D  ++ G    A  +++R + +    +VV+YT+ I+
Sbjct: 232 GHKLFSQALHKGVKLDVVVFSSTIDVYVKFGYLTTAFDVYKRMLCQGISPNVVTYTILIK 291

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           GL + GR  EA+ +Y Q+    + P+  TY  ++  FCK  N++    L +D+I
Sbjct: 292 GLCQDGRIYEAFGIYCQILKRGLEPSVVTYSSLIDGFCKYGNLRSGFALYEDMI 345



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/191 (21%), Positives = 86/191 (45%)

Query: 411 AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
           A ++ + +LD G  P+  +F  L+ G C   ++D A  +++ +     A +   ++ ++D
Sbjct: 162 ASRMLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFELFKVMEQRGIAPDLIAYSTLID 221

Query: 471 RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
              +AG      +LF +A+ +   LDVV ++  I   ++ G    A+ +Y +M    + P
Sbjct: 222 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKFGYLTTAFDVYKRMLCQGISP 281

Query: 531 NAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQL 590
           N  TY +++   C++  I     +   ++   +E    T   L     K+ +  S     
Sbjct: 282 NVVTYTILIKGLCQDGRIYEAFGIYCQILKRGLEPSVVTYSSLIDGFCKYGNLRSGFALY 341

Query: 591 VEMCNLGLIPD 601
            +M  +G  PD
Sbjct: 342 EDMIKMGYPPD 352



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/228 (22%), Positives = 91/228 (39%), Gaps = 31/228 (13%)

Query: 93  VTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTP 152
           VT + GR +    +   + ++G    A  F   +  + +     + L+ FD M R     
Sbjct: 432 VTVMEGRLKEGLFLFFRMFKMGLEPDAVAFCTLMDAFCKNMKPTIGLQLFDLMQRNKIPA 491

Query: 153 NTFARNIVMDVLFKIGRVDLGIK----VLKETQLPNFLSFNIALCNLCKLNDVSNVKDVI 208
           +    N+V+++LFK   V+   K    +L+    P+ +++N  +C  C L  +     + 
Sbjct: 492 DIAVCNVVINLLFKGQSVEEASKFFNNLLEGKMEPDIVTYNTMICGYCSLRRLDEAARIF 551

Query: 209 GMMVRKGFYPNVRMFEILLNC---------------------------FCKMGRIAEAYQ 241
            M+    F PN     IL++                             CK GR+ EA  
Sbjct: 552 EMLKFTPFGPNAVTLTILIHTLCKNSDMDGALRIISPSIISYSIIIDGLCKRGRVDEATN 611

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
           +    I       V A+ +LI G  ++ RL  A  L+E M++NG  P+
Sbjct: 612 IFHQAIDAKILPDVVAYAILIRGCCKVGRLVEAALLYEHMLRNGVKPD 659


>gi|255574572|ref|XP_002528197.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532409|gb|EEF34204.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 642

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 122/524 (23%), Positives = 224/524 (42%), Gaps = 44/524 (8%)

Query: 65  IALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLL 124
           + + FF W  K+R++ HD  SF  +I  +       E  + I   +    CVI +     
Sbjct: 109 VKIQFFKWAGKRRNFEHDSSSFMALIHSLDEAGFYGEMWKTIQDMVRSSTCVISSVYLSE 168

Query: 125 FLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE----- 179
            +++  + +M    L  F ++      P     N ++ +L + G ++   ++  E     
Sbjct: 169 IVKLLGKAKMVNKALSVFYQIKGRKCKPAATTYNSMILMLKQEGHLEKVHEIYNEMCNDG 228

Query: 180 TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEA 239
              P+ ++++  +    KL    +   +   M   G YP  +++  LL  + K+ ++ +A
Sbjct: 229 NCFPDTVTYSALISAFGKLGHYDSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKVEKA 288

Query: 240 YQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSP----------- 288
             ++  M   G +L+V  +T  I G  +  R+D A  ++  M+++GC P           
Sbjct: 289 LDVIKEMKDKGCTLTVFTYTEWIKGLGKAGRVDDAYRVFLDMIKDGCKPDVVLINSLINI 348

Query: 289 ------------------------NVVTYTSLIKGFMEAKM-FSIAFSFLDMLESEGHAP 323
                                   NVVTY ++IK   E K   S A S+ + ++  G AP
Sbjct: 349 LGKVGRLEVTLKLFRKMESWQCKPNVVTYNTVIKALFECKAPASEAASWFEKMKGCGIAP 408

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV 383
               +++LID   K    + AL + + + E    P    +CSL++++    R+    +L 
Sbjct: 409 SSFTYSILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCSLINSLGKVKRYEAANELF 468

Query: 384 CGLEV---EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
             L+     +   VY  ++ +F K G  ++AV L+N M   G  PD Y++  L+ G+  A
Sbjct: 469 LELKENCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKLGSKPDVYAYNALMSGMVRA 528

Query: 441 RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSY 500
             IDEA ++ + +  N  + + + H  I++ L   G   +AI++F +        D VSY
Sbjct: 529 GMIDEAQSLLRTMDENGCSPDLNSHNIILNGLARTGVPDRAIEMFAKMKSSIIKPDAVSY 588

Query: 501 TVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
              +  L   G  EEA  L  +M       N  TY  +L +  K
Sbjct: 589 NTVLGCLSHAGLFEEAAKLMREMNLKGFEYNNITYTSILEAVGK 632



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 97/412 (23%), Positives = 177/412 (42%), Gaps = 30/412 (7%)

Query: 59  NCPSDLIALSFFIWC-AKQRDYFHDVQSFDHM--------ISVVTRLTG------RFETV 103
           NC  D +  S  I    K   Y   ++ FD M          + T L G      + E  
Sbjct: 229 NCFPDTVTYSALISAFGKLGHYDSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKVEKA 288

Query: 104 RGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDV 163
             ++ E+   GC +   T+  +++   +          F +M + G  P+    N ++++
Sbjct: 289 LDVIKEMKDKGCTLTVFTYTEWIKGLGKAGRVDDAYRVFLDMIKDGCKPDVVLINSLINI 348

Query: 164 LFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNL--CKLNDVSNVKDVIGMMVRKGFY 217
           L K+GR+++ +K+ ++ +     PN +++N  +  L  CK    S        M   G  
Sbjct: 349 LGKVGRLEVTLKLFRKMESWQCKPNVVTYNTVIKALFECKA-PASEAASWFEKMKGCGIA 407

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
           P+   + IL++ FCK  RI +A  LL  M   G      A+  LI+   +++R + A  L
Sbjct: 408 PSSFTYSILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCSLINSLGKVKRYEAANEL 467

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
           + ++ +N    +   Y  +IK F +    S A    + +E  G  PD+  +N L+  + +
Sbjct: 468 FLELKENCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKLGSKPDVYAYNALMSGMVR 527

Query: 338 MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG----RFSLLPKLVCGLEVEADLV 393
            G  D+A  +   + E    PD  +   +L+ +  +G       +  K+   + ++ D V
Sbjct: 528 AGMIDEAQSLLRTMDENGCSPDLNSHNIILNGLARTGVPDRAIEMFAKMKSSI-IKPDAV 586

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
            YN +L     AG   +A KL   M  KGF  +N ++  +L  +    K+DE
Sbjct: 587 SYNTVLGCLSHAGLFEEAAKLMREMNLKGFEYNNITYTSILEAVG---KVDE 635



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/349 (20%), Positives = 153/349 (43%), Gaps = 35/349 (10%)

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW-TVLIDGFRRLRRL 271
           R+ F  +   F  L++   + G   E ++ +  M+   T +  + + + ++    + + +
Sbjct: 120 RRNFEHDSSSFMALIHSLDEAGFYGEMWKTIQDMVRSSTCVISSVYLSEIVKLLGKAKMV 179

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA-PDLVFHNV 330
           + A  ++ ++    C P   TY S+I    +           + + ++G+  PD V ++ 
Sbjct: 180 NKALSVFYQIKGRKCKPAATTYNSMILMLKQEGHLEKVHEIYNEMCNDGNCFPDTVTYSA 239

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA 390
           LI    K+G YD A+ ++D + E  L P +                              
Sbjct: 240 LISAFGKLGHYDSAIRLFDEMKENGLYPTAK----------------------------- 270

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
              +Y  LL  + K     +A+ +   M DKG T   +++   ++GL  A ++D+A  V+
Sbjct: 271 ---IYTTLLGIYFKLDKVEKALDVIKEMKDKGCTLTVFTYTEWIKGLGKAGRVDDAYRVF 327

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE- 509
             ++ +    +  +  ++++ L + GR    ++LFR+    +   +VV+Y   I+ L E 
Sbjct: 328 LDMIKDGCKPDVVLINSLINILGKVGRLEVTLKLFRKMESWQCKPNVVTYNTVIKALFEC 387

Query: 510 GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
                EA   + +MK   + P+++TY +++  FCK   I+    LL+++
Sbjct: 388 KAPASEAASWFEKMKGCGIAPSSFTYSILIDGFCKTNRIEKALLLLEEM 436



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 48/249 (19%), Positives = 103/249 (41%), Gaps = 14/249 (5%)

Query: 383 VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT-PDNYSFVGLLRGLCGAR 441
           + G + +     YN+++    + G   +  ++YN M + G   PD  ++  L+       
Sbjct: 189 IKGRKCKPAATTYNSMILMLKQEGHLEKVHEIYNEMCNDGNCFPDTVTYSALISAFGKLG 248

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYT 501
             D AI ++  +  N     A ++T ++    +  +  KA+ + +    +   L V +YT
Sbjct: 249 HYDSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKVEKALDVIKEMKDKGCTLTVFTYT 308

Query: 502 VAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
             I+GL + GR ++AY ++  M      P+      ++    K   +++  +L + +   
Sbjct: 309 EWIKGLGKAGRVDDAYRVFLDMIKDGCKPDVVLINSLINILGKVGRLEVTLKLFRKMESW 368

Query: 562 RIELDYHTSIRLTKFIFKFHS-SSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTPVSL 620
           + + +  T   + K +F+  + +S A +   +M   G+ P             + T   L
Sbjct: 369 QCKPNVVTYNTVIKALFECKAPASEAASWFEKMKGCGIAPS------------SFTYSIL 416

Query: 621 FDGFVPCER 629
            DGF    R
Sbjct: 417 IDGFCKTNR 425


>gi|225424625|ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Vitis vinifera]
 gi|296081374|emb|CBI16807.3| unnamed protein product [Vitis vinifera]
          Length = 519

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 121/485 (24%), Positives = 215/485 (44%), Gaps = 10/485 (2%)

Query: 109 ELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIG 168
           E+ +  C + +  +  F+ +  R   + +  + +D M   GF+ N+F  +  +  L K+ 
Sbjct: 34  EMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDRMIPQGFSLNSFTYSRFISGLCKVK 93

Query: 169 RVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFE 224
              L  K+L++      +P+  ++NI L  LC  N +     V+  MV KG  P++  + 
Sbjct: 94  NFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLDVALGVVQTMVEKGREPDIVTYT 153

Query: 225 ILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN 284
           I++N  C+ GR   A ++   M+  G S    A   L+ G     ++D+A  L    ++ 
Sbjct: 154 IVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGLCHDGKVDLAYELTVGAMRG 213

Query: 285 GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
               +   Y SLI GF +A     A S +  +   G  PDLV +NVL++        ++A
Sbjct: 214 RIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLNYCCDELLLEEA 273

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS-LLPKLVCGLEVEA--DLVVYNALLSY 401
            ++   +    + PD Y++  LL  +C + R       +V  +E +   D+V YN ++  
Sbjct: 274 ENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGLCDVVSYNTIIKA 333

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVN 461
            C A    +A KL+  M  KG TPD  +F  L++        + A  +   +       +
Sbjct: 334 LCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPD 393

Query: 462 AHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYS 521
             ++T IVD L + G+   A  +F   +      DVVSY   I GL    R  EA  LY 
Sbjct: 394 RVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRASRVSEAMHLYE 453

Query: 522 QMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFH 581
            M      P+  T+++++     E+ + +  R+   +++    LD   S  L   I   H
Sbjct: 454 DMHTGGPCPDEVTFKLIIGGLIWEKKLSVACRVWDQMMEKGFTLDGAVSETLVNAI---H 510

Query: 582 SSSSA 586
           S+ ++
Sbjct: 511 SNDAS 515



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 102/453 (22%), Positives = 203/453 (44%), Gaps = 43/453 (9%)

Query: 86  FDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEM 145
           ++  I V+ R + RF+        +   G  + + T+  F+    + + + ++ +  ++M
Sbjct: 47  YNRFIGVLVRQS-RFDLAEQYYDRMIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDM 105

Query: 146 GRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCKLNDV 201
            R G+ P+ +A NI +++L    ++D+ + V++    + + P+ +++ I +  LC+    
Sbjct: 106 DRLGYVPDIWAYNIYLNLLCCENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRF 165

Query: 202 SNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVL 261
            +  ++   MVRKGF P+ +    L+   C  G++  AY+L    +      S + +  L
Sbjct: 166 DSAVEIWRNMVRKGFSPDEKACRALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSL 225

Query: 262 IDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH 321
           I+GF +   +D A  +   M +NGC P++VTY  L+    +  +   A + +  +E  G 
Sbjct: 226 INGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGV 285

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK-------------------------- 355
            PD+  +N L+  L K    D A  +    +E K                          
Sbjct: 286 EPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYK 345

Query: 356 ---------LVPDSYTFCSLLSTVCLSGRFSLLPKLV---CGLEVEADLVVYNALLSYFC 403
                    + PD  TF  L+      G  ++  KL+    GL +  D V+Y  ++ + C
Sbjct: 346 LFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLC 405

Query: 404 KAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAH 463
           K G    A  ++  M++ G TPD  S+  L+ GLC A ++ EA+++Y+ +    P  +  
Sbjct: 406 KTGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCPDEV 465

Query: 464 VHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
               I+  LI   +   A +++ + + + + LD
Sbjct: 466 TFKLIIGGLIWEKKLSVACRVWDQMMEKGFTLD 498



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 117/499 (23%), Positives = 208/499 (41%), Gaps = 47/499 (9%)

Query: 129 YWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP----- 183
           Y +  +    L+ FDEM +      +   N  + VL +  R DL  +   +  +P     
Sbjct: 19  YVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYY-DRMIPQGFSL 77

Query: 184 NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
           N  +++  +  LCK+ +   ++ ++  M R G+ P++  + I LN  C   +        
Sbjct: 78  NSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQ-------- 129

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
                                      LD+A  + + MV+ G  P++VTYT +I G   A
Sbjct: 130 ---------------------------LDVALGVVQTMVEKGREPDIVTYTIVINGLCRA 162

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
             F  A      +  +G +PD      L+  L   G  D A ++  G +  ++      +
Sbjct: 163 GRFDSAVEIWRNMVRKGFSPDEKACRALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIY 222

Query: 364 CSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
            SL++  C +G       ++  +     E DLV YN LL+Y C      +A  L   M  
Sbjct: 223 NSLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMKKMER 282

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
            G  PD YS+  LL+GLC A ++D+A  +    +      +   +  I+  L  A    +
Sbjct: 283 SGVEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGLCDVVSYNTIIKALCTASHTKR 342

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
           A +LF     +    DVV++T+ I+  L  G +  A  L  QM  + + P+   Y  ++ 
Sbjct: 343 AYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVD 402

Query: 541 SFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
             CK   + M   +  D++++ I  D  +   L   + +    S A++   +M   G  P
Sbjct: 403 HLCKTGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCP 462

Query: 601 DEMWRKL---GLLSDETMT 616
           DE+  KL   GL+ ++ ++
Sbjct: 463 DEVTFKLIIGGLIWEKKLS 481



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/402 (22%), Positives = 183/402 (45%), Gaps = 10/402 (2%)

Query: 79  YFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMV 138
           Y  D+ +++  ++++     + +   G+V  +   G      T+ + +    R   +   
Sbjct: 110 YVPDIWAYNIYLNLLC-CENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSA 168

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCN---- 194
           +E +  M R GF+P+  A   ++  L   G+VDL  + L    +   + F+ ++ N    
Sbjct: 169 VEIWRNMVRKGFSPDEKACRALVLGLCHDGKVDLAYE-LTVGAMRGRIKFSKSIYNSLIN 227

Query: 195 -LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
             C+   +   + +I  M R G  P++  + +LLN  C    + EA  L+  M   G   
Sbjct: 228 GFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEP 287

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
            V ++  L+ G  +  RLD A  +    ++     +VV+Y ++IK    A     A+   
Sbjct: 288 DVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLF 347

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           + +  +G  PD+V   +LI    + GS + A  + D +  L L+PD   + +++  +C +
Sbjct: 348 EEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKT 407

Query: 374 GRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           G+  +   + C +    +  D+V YNAL++  C+A   ++A+ LY  M   G  PD  +F
Sbjct: 408 GKMGMAHSVFCDMVESGITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCPDEVTF 467

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
             ++ GL   +K+  A  V+  ++     ++  V   +V+ +
Sbjct: 468 KLIIGGLIWEKKLSVACRVWDQMMEKGFTLDGAVSETLVNAI 509



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/352 (21%), Positives = 143/352 (40%), Gaps = 44/352 (12%)

Query: 291 VTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDG 350
           + Y + I  +++A +   A    D +         + +N  I  L +   +D A   YD 
Sbjct: 10  LAYRAQISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDR 69

Query: 351 LLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE----------------------- 387
           ++      +S+T+   +S +C    F L+ KL+  ++                       
Sbjct: 70  MIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQ 129

Query: 388 ---------------VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
                           E D+V Y  +++  C+AG  + AV+++  M+ KGF+PD  +   
Sbjct: 130 LDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRA 189

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA---IQLFRRAI 489
           L+ GLC   K+D A  +  G +      +  ++ ++++   +AG   KA   I   RR  
Sbjct: 190 LVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNG 249

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
            E    D+V+Y V +    +    EEA  L  +M+   V P+ Y+Y  +L   CK   + 
Sbjct: 250 CEP---DLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLD 306

Query: 550 MVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
               ++ + ++A+   D  +   + K +     +  A     EM   G+ PD
Sbjct: 307 KAYMMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPD 358


>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Cucumis sativus]
          Length = 728

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 117/480 (24%), Positives = 205/480 (42%), Gaps = 43/480 (8%)

Query: 101 ETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA---FDEMGRFGFTPNTFAR 157
           E    +  E++  G    + T+   +  Y R    G VLEA     EM   GF  +    
Sbjct: 226 EYAGNVFDEMSARGVYPDSCTYKYIIVGYCRN---GNVLEADRWICEMMERGFVVDNATL 282

Query: 158 NIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
            +++    +   V+  +    KV K    PN ++++  +  LCK   V    +++  MV+
Sbjct: 283 TLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVK 342

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQL-LGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
            G+ PNV     L++  CK G    A++L L L+ +     +V+ +T +I G+ +  +L 
Sbjct: 343 NGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLS 402

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A  L+E+M + G  PN  TYT+LI G  +A  FS A+  ++++ +EG  P+   +N ++
Sbjct: 403 RAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIV 462

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADL 392
           D L K G  ++A          KL+   +                         ++EAD 
Sbjct: 463 DGLCKRGRAEEAF---------KLLNTGFQN-----------------------QIEADG 490

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           V Y  L+S  CK    NQA+   N M   GF PD + +  L+   C    + ++  ++  
Sbjct: 491 VTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDE 550

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           ++    A     +T+++       +   A++ F++        D +SY   I GL +  R
Sbjct: 551 VIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESR 610

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
            +EA  LY  M    + P   T   +   +CK  +      +L+ +         HT IR
Sbjct: 611 LDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERLNKKLWIRTVHTLIR 670



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/360 (25%), Positives = 155/360 (43%), Gaps = 18/360 (5%)

Query: 136 GMVLEAFD---EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL-----KETQLPNFLS 187
           G V +AF+   EM + G+ PN +    ++  L K G  +   ++       +   PN  +
Sbjct: 328 GSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHT 387

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           +   +   CK   +S  + +   M  +G  PN   +  L++  CK G  ++AY+L+ LM 
Sbjct: 388 YTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMS 447

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
             G   +   +  ++DG  +  R + A  L     QN    + VTYT LI    +    +
Sbjct: 448 NEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMN 507

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A  FL+ +   G  PD+  +  LI    +     D+  ++D +++L L P   T+ S++
Sbjct: 508 QALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMI 567

Query: 368 STVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
              C   + SL  K    +       D + Y AL+S  CK    ++A +LY+TM+DKG +
Sbjct: 568 CGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLS 627

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           P   + V L    C       A+ + + +       N  +    V  LI    C K + L
Sbjct: 628 PCEVTRVTLTYEYCKTEDFASAMVILERL-------NKKLWIRTVHTLIRKLCCEKKVAL 680



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 130/304 (42%), Gaps = 4/304 (1%)

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           E ++   A +  D + + G  PD   +  +I    + G+  +A      ++E   V D+ 
Sbjct: 221 EMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNA 280

Query: 362 TFCSLLSTVC---LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           T   +++  C   L  R       V  + +  +L+ Y++++S  CK G   QA +L   M
Sbjct: 281 TLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEM 340

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM-NNPAVNAHVHTAIVDRLIEAGR 477
           +  G+ P+ Y+   L+ GLC     + A  ++  ++  +N   N H +TA++    +  +
Sbjct: 341 VKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEK 400

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
             +A  LF R   +    +  +YT  I G  + G   +AY L   M +    PN  TY  
Sbjct: 401 LSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNS 460

Query: 538 MLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLG 597
           ++   CK    +   +LL      +IE D  T   L     K    + A+  L +M  +G
Sbjct: 461 IVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVG 520

Query: 598 LIPD 601
             PD
Sbjct: 521 FQPD 524


>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 566

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 110/459 (23%), Positives = 204/459 (44%), Gaps = 19/459 (4%)

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCKLND 200
           M   G  P+  A   ++    KIGR     +++    +   + +  S+N+ +   CK  +
Sbjct: 95  MTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSYNVLINAYCKSGE 154

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
           +   ++ + ++      PN   ++ +L   C  G++ +A Q+L   +       V   TV
Sbjct: 155 I---EEALRVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTV 211

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           LID   +   +  A  L+ +M   GC P+VVTY  LIKGF +      A  FL  L S G
Sbjct: 212 LIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYG 271

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
              D++ HN+++  L   G + DA+ +   +L     P   TF  L++ +C  G   LL 
Sbjct: 272 CQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKG---LLG 328

Query: 381 KLVCGLEV------EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
           K +  LE+        +   +N L+  FC     ++A++    M+ +G  PD  ++  LL
Sbjct: 329 KALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILL 388

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
             LC   K+D+A+ +   +     + +   +  ++D L++ G+   A++L      +   
Sbjct: 389 TALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLK 448

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
            D+++ T  + GL   G+  EA   +  +K   + PNA+ Y  +++  CK +   +    
Sbjct: 449 PDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDF 508

Query: 555 LQDVID---ARIELDYHTSIRLTKFIFKFHSSSSAVNQL 590
           L D++       E  Y T I+   +      +S   N+L
Sbjct: 509 LVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNEL 547



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 109/434 (25%), Positives = 187/434 (43%), Gaps = 12/434 (2%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR +    I+G L   G VI A ++ + +  Y +    G + EA   +      PN    
Sbjct: 118 GRTKNATRIMGILEESGAVIDANSYNVLINAYCKS---GEIEEALRVLDHTSVAPNAATY 174

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQL-----PNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
           + V+  L   G++   ++VL + QL     P+ ++  + +   CK + V     +   M 
Sbjct: 175 DAVLCSLCDRGKLKQAMQVL-DRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMR 233

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
            KG  P+V  + +L+  FCK GR+ EA   L  + + G    V +  +++       R  
Sbjct: 234 GKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWM 293

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A  L   M++ GC P+VVT+  LI    +  +   A + L+M+   GH P+    N LI
Sbjct: 294 DAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLI 353

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA-- 390
                    D A++  + ++     PD  T+  LL+ +C  G+      ++  L  +   
Sbjct: 354 QGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCS 413

Query: 391 -DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
             L+ YN ++    K G    AV+L   M  KG  PD  +   ++ GL    K+ EAI  
Sbjct: 414 PSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKF 473

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
           +  +       NA ++ +I+  L +A +   AI      +         SYT  I+G+  
Sbjct: 474 FHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITY 533

Query: 510 GGRTEEAYILYSQM 523
            G  EEA  L +++
Sbjct: 534 EGLAEEASKLSNEL 547



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 99/393 (25%), Positives = 164/393 (41%), Gaps = 44/393 (11%)

Query: 250 GTSLSVNAWTVLIDGFRRLRR---LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
           G + S+N     I    RL R   L+      E M   G  P+VV  T+LI+ F +    
Sbjct: 61  GVNTSLNFEESEIHHLCRLIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRT 120

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
             A   + +LE  G   D   +NVLI+   K G  ++AL V D      + P++ T+ ++
Sbjct: 121 KNATRIMGILEESGAVIDANSYNVLINAYCKSGEIEEALRVLD---HTSVAPNAATYDAV 177

Query: 367 LSTVCLSGRFSLLPKLV---CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           L ++C  G+     +++      +   D+V    L+   CK     QA+KL+N M  KG 
Sbjct: 178 LCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGC 237

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
            PD  ++  L++G C   ++DEAI   + +       +   H  I+  L   GR   A++
Sbjct: 238 KPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMK 297

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           L    + +     VV++ + I  L + G   +A  +   M      PN+ ++  ++  FC
Sbjct: 298 LLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFC 357

Query: 544 KERNIK--------MVKR---------------LLQD--VIDARIELDYHTSIRLTKFIF 578
             + I         MV R               L +D  V DA + L   +S   +  + 
Sbjct: 358 NRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLI 417

Query: 579 KFHS----------SSSAVNQLVEMCNLGLIPD 601
            +++          +  AV  L EMC  GL PD
Sbjct: 418 SYNTVIDGLLKVGKAELAVELLEEMCYKGLKPD 450



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 116/267 (43%), Gaps = 4/267 (1%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR+     ++  + R GC     TF + +    +  + G  L   + M + G TPN+ + 
Sbjct: 290 GRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSF 349

Query: 158 NIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N ++        +D  I+ L+        P+ +++NI L  LCK   V +   ++  +  
Sbjct: 350 NPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSS 409

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           KG  P++  +  +++   K+G+   A +LL  M   G    +   T ++ G  R  ++  
Sbjct: 410 KGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHE 469

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A   +  +   G  PN   Y S++ G  +A+  S+A  FL  + + G  P    +  LI 
Sbjct: 470 AIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIK 529

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDS 360
            ++  G  ++A  + + L    LV  S
Sbjct: 530 GITYEGLAEEASKLSNELYSRGLVKKS 556


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 118/513 (23%), Positives = 218/513 (42%), Gaps = 43/513 (8%)

Query: 134 MYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK---ETQL-PNFLSFN 189
           M   V++ +  M   G  PN    N V++ L K G V     ++K   E+++ P+  ++ 
Sbjct: 195 MTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYT 254

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI-- 247
             +   C+ +D+ +   V   M ++G  PN   +  L+N  C  GR+ EA+ L+  MI  
Sbjct: 255 SMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILH 314

Query: 248 ---------------------------------TLGTSLSVNAWTVLIDGFRRLRRLDMA 274
                                              G   +V  +T LI G      L +A
Sbjct: 315 GILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVA 374

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             L+ +M ++G  PN VTY +LI   +E +    AF  L+++   G +P++V +N +I  
Sbjct: 375 IGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKG 434

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEAD 391
              +G    A+ V + +L+     +  T+ +++   C SG  +   +++  +     + D
Sbjct: 435 YCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPD 494

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
              Y  L+  FCK      A  L+N M+D G  P+  ++  L+ G C   K+D A ++ +
Sbjct: 495 EWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLE 554

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
            +  +    N   +  ++  L +      A +L +  I E    +VV+YT  I GL + G
Sbjct: 555 HMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNG 614

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSI 571
            T  A  ++++M      PN  TY  ++ +  +E  ++  + L  ++    +  D  T +
Sbjct: 615 STSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYV 674

Query: 572 RLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMW 604
           ++ +          A N L  M   G  P  +W
Sbjct: 675 KMIEAYIMSGKVEHAFNFLGRMIKAGCQP-TLW 706



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 119/513 (23%), Positives = 207/513 (40%), Gaps = 42/513 (8%)

Query: 133 EMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR----VDLGIKVLKETQLPNFLSF 188
           E     +   D + + G     FA + ++  L ++G     +D   ++L E   PN L +
Sbjct: 159 EAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIY 218

Query: 189 NIALCNLCKLNDVSNVK-----------------------------------DVIGMMVR 213
           N  +  LCK  +V++ +                                    V   M +
Sbjct: 219 NAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAK 278

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +G  PN   +  L+N  C  GR+ EA+ L+  MI  G   + +  T  I     +   + 
Sbjct: 279 EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYED 338

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L+  M   GC PNV TYT+LI G   + +  +A      +  +G  P+ V +N LI+
Sbjct: 339 AWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALIN 398

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG---RFSLLPKLVCGLEVEA 390
            L +      A  V + +      P+  T+  ++   C+ G   +  L+   +      A
Sbjct: 399 ILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSA 458

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           +LV YN ++  +C +G    A+++ + M D G  PD +S+  L+ G C   K++ A  ++
Sbjct: 459 NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLF 518

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
             +V +    N   +TA++D   +  +   A  L           +V +Y V I GL + 
Sbjct: 519 NEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQ 578

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
                A  L   M    + PN  TY  M+   CK  +  +   +   +I+     +  T 
Sbjct: 579 NNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTY 638

Query: 571 IRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
             L + + +      A N   E+   GLIPDE+
Sbjct: 639 SSLIRALGQEGKVEEAENLFAELERHGLIPDEI 671



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 116/514 (22%), Positives = 228/514 (44%), Gaps = 57/514 (11%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G +E    +  ++   GC     T+   +       +  + +  F  M R G  PNT   
Sbjct: 334 GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTY 393

Query: 158 NIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N ++++L +  R+     VL    +    PN +++N  +   C L D      V+  M++
Sbjct: 394 NALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQ 453

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +G   N+  +  ++  +C  G    A ++L LM   G      ++T LI GF ++ +++ 
Sbjct: 454 RGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMES 513

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L+ +MV +G  PN VTYT+LI G+ + +    A S L+ ++  G  P++  +NVLI 
Sbjct: 514 AFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIH 573

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLV 393
            L+K  ++  A ++   ++E  + P+  T+ +++  +C +G  SL               
Sbjct: 574 GLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSL--------------- 618

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
                            A++++N M+++G  P+  ++  L+R L    K++EA N++  +
Sbjct: 619 -----------------ALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAEL 661

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
             +    +   +  +++  I +G+   A     R I       + +Y V I+GL      
Sbjct: 662 ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL------ 715

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI-ELDYHTSIR 572
           +  Y+L  Q   +A  P+     V   SF      +   +    V+ A++ ELD   S++
Sbjct: 716 KNEYLLADQ--RLAALPDV----VPNCSF----GYQTTDQDAVSVMSAKLAELDPGLSVQ 765

Query: 573 LTKFIFKFHSSSS---AVNQLV-EMCNLGLIPDE 602
           +   +    S++      N+L+  M + GL PD+
Sbjct: 766 VQNALVSNLSTAGRWFEANELLGSMISQGLCPDQ 799



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 97/440 (22%), Positives = 183/440 (41%), Gaps = 31/440 (7%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALC 193
            L   D M   G  P+ ++   ++    KI +++    +  E       PN +++   + 
Sbjct: 479 ALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALID 538

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
             CK   +     ++  M R G  PNV+ + +L++   K    + A +L  +MI  G   
Sbjct: 539 GYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFP 598

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
           +V  +T +IDG  +     +A  ++ KM++ GC PN++TY+SLI+   +      A +  
Sbjct: 599 NVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLF 658

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST---- 369
             LE  G  PD + +  +I+     G  + A +    +++    P  +T+  L+      
Sbjct: 659 AELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNE 718

Query: 370 -VCLSGRFSLLPKLV----------------------CGLEVEADLVVYNALLSYFCKAG 406
            +    R + LP +V                        L+    + V NAL+S    AG
Sbjct: 719 YLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAG 778

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
              +A +L  +M+ +G  PD  ++  LL  L   R +D A+ V++ +      V+ + + 
Sbjct: 779 RWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYK 838

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
            ++  L +  R  +A   F   ++  +  D V   V I GLL  G  +        M+  
Sbjct: 839 ELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETR 898

Query: 527 AVPPNAYTYRVMLLSFCKER 546
              P+ + Y ++     K+R
Sbjct: 899 RYMPSFHIYTILAREASKKR 918


>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 729

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 120/473 (25%), Positives = 203/473 (42%), Gaps = 60/473 (12%)

Query: 133 EMYGMV------------LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET 180
           EMYG+V            L  F++M R  F P+    N ++ +L      +L +K L+  
Sbjct: 169 EMYGIVDVLIGGYLNYQCLLVFEKMMRNRFLPDVKNCNRILKILRD---KNLLVKALEVY 225

Query: 181 QL-------PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKM 233
           ++       P   ++N  L + CK  +V    D++  M  +G YP+   F +L+N   K 
Sbjct: 226 RMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKK 285

Query: 234 GRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCS------ 287
           G + +A  L+  M   G  +S   +  LI G+ +   L  A  LWE+MV  G S      
Sbjct: 286 GELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASH 345

Query: 288 -----------------------------PNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
                                        P++++Y +LI GF        AF  LD L  
Sbjct: 346 NTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRF 405

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL 378
              + ++V +N LID L ++G  + AL + + ++   + PD  T+  L++  C  G   +
Sbjct: 406 RNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLM 465

Query: 379 LPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
             +    +  + +  D   Y A +    K G   +A KL   ML KGF PD  ++   + 
Sbjct: 466 AKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVN 525

Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
           GLC    ++EA  + Q ++ +    +   +T+ +   +E G   +  ++F   +      
Sbjct: 526 GLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTP 585

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
            VV+YTV I      GR + A   + +M+   V PN  TY V++  FCK R +
Sbjct: 586 TVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKM 638



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 110/480 (22%), Positives = 205/480 (42%), Gaps = 42/480 (8%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALC 193
            LE +  MG +G  P     N ++    K G V   + ++ + Q     P+ ++FN+ + 
Sbjct: 221 ALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLIN 280

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
            L K  ++   K +I  M + G   +   +  L+  +CK G + EA  L   M+T G S 
Sbjct: 281 GLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSP 340

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
           +V +   ++ GF +  ++  A      M++    P++++Y +LI GF        AF  L
Sbjct: 341 TVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILL 400

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           D L     + ++V +N LID L ++G  + AL + + ++   + PD  T+  L++  C  
Sbjct: 401 DELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKL 460

Query: 374 GRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           G   +  +    +  + +  D   Y A +    K G   +A KL   ML KGF PD  ++
Sbjct: 461 GNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITY 520

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF----- 485
              + GLC    ++EA  + Q ++ +    +   +T+ +   +E G   +  ++F     
Sbjct: 521 NVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLS 580

Query: 486 --RRAIVEKYPL----------------------------DVVSYTVAIRGLLEGGRTEE 515
             +   V  Y +                            +V++Y V I G  +  + ++
Sbjct: 581 RGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQ 640

Query: 516 AYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTK 575
           A   + +M+   + PN YTY +++   C     +   RL   ++  RI  D  T   L K
Sbjct: 641 ACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLK 700



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 107/499 (21%), Positives = 213/499 (42%), Gaps = 37/499 (7%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           ++R  +    +F+ +I+ +++  G  +  +G++ E+A+ G  +   T+   +  Y +  +
Sbjct: 264 QERGCYPSEVTFNVLINGLSK-KGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGL 322

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCN 194
               L  ++EM   G +P   + N +M                                 
Sbjct: 323 LVEALALWEEMVTRGVSPTVASHNTIM-------------------------------YG 351

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
            CK   +S+ +  +  M++K   P++  +  L+  FC++G I EA+ LL  +     S +
Sbjct: 352 FCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFN 411

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           +  +  LIDG  RL  L+ A  L E M+  G  P+VVTYT L+ G  +     +A  F D
Sbjct: 412 IVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFD 471

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            +   G APD   +   I    K+G    A  + + +L     PD  T+   ++ +C  G
Sbjct: 472 EMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLG 531

Query: 375 RF----SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
                  LL K++    V  D V Y + +    + G   +  +++  ML +G TP   ++
Sbjct: 532 NLEEAGELLQKMIRDGHV-PDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTY 590

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             L+       ++D A+  +  +       N   +  +++   +  +  +A + F     
Sbjct: 591 TVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQE 650

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
           +    +  +YT+ I      G+ +EA  LY+QM    + P++ T+  +L    K+  ++ 
Sbjct: 651 KGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKLDKDYKVQA 710

Query: 551 VKRLLQDVIDARIELDYHT 569
           V+ +   ++D    +D +T
Sbjct: 711 VQFIESLILDGDRTIDANT 729



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/331 (23%), Positives = 137/331 (41%), Gaps = 5/331 (1%)

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           ++  M + G  P V TY +++  F +      A   +  ++  G  P  V  NVLI+ LS
Sbjct: 224 VYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLS 283

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG----RFSLLPKLVCGLEVEADL 392
           K G    A  +   + +  L    YT+  L+   C  G      +L  ++V    V   +
Sbjct: 284 KKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTR-GVSPTV 342

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
             +N ++  FCK G  + A +  + ML K   PD  S+  L+ G C    I EA  +   
Sbjct: 343 ASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDE 402

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           +   N + N   +  ++D L   G    A++L    I      DVV+YTV + G  + G 
Sbjct: 403 LRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGN 462

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
              A   + +M H+ + P+ + Y   ++   K  +     +L ++++      D  T   
Sbjct: 463 MLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNV 522

Query: 573 LTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
               + K  +   A   L +M   G +PD +
Sbjct: 523 FVNGLCKLGNLEEAGELLQKMIRDGHVPDHV 553


>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 111/473 (23%), Positives = 217/473 (45%), Gaps = 16/473 (3%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR +    +  E+A    V+   T+ + +  Y         ++   EM   G   N  A 
Sbjct: 267 GRIKDAHQLFDEMASPPDVV---TYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAY 323

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQLPNFL----SFNIALCNLCKLNDVSNVKDVIGMMVR 213
             V+ +L   G+V   ++V+++  +   +     F   +   C+  D++  ++    M +
Sbjct: 324 TSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQK 383

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +G   +   +  L+N  C+ G + EA ++L  M   G  +    +TVLIDG+ ++ ++  
Sbjct: 384 RGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTE 443

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  +  KMVQ   +PNVVTYT+L  G  +      A   L  + S+G   ++  +N LI+
Sbjct: 444 AFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLIN 503

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF----SLLPKLVCGLEVE 389
            L K G+ + A+     + E  L PD YT+ +++  +C S       SLL +++    ++
Sbjct: 504 GLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEML-DKGIK 562

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
             +V YN L++ FC +G      +L   ML+K   P+  ++  L++  C  + +     +
Sbjct: 563 PTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEI 622

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
           Y+G++      N + +  ++    +A    +A+      I + + L   SY   IR L +
Sbjct: 623 YKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNK 682

Query: 510 GGRTEEAYILYSQMK--HIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
             +  EA  L+ +M+   +   P+ Y + +  LSF  E N++    L  ++++
Sbjct: 683 KKKFTEARRLFEKMRKERLTAEPDVYNFYID-LSF-NEDNLESTLALCDELVE 733



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 109/465 (23%), Positives = 207/465 (44%), Gaps = 57/465 (12%)

Query: 153 NTFARNIVMDVLFKIGRVDLGIKVLKE-TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
           NT + NI++  L   GR+    ++  E    P+ +++ I +   C L+++     ++  M
Sbjct: 252 NTCSYNILLKALCTAGRIKDAHQLFDEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEM 311

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
             +G   N   +  ++   C  G++++A +++  M+  G  L    +T ++ GF R   L
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDL 371

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
             A   +++M + G + + VTYT+LI G   A     A   L  +E +G   D V + VL
Sbjct: 372 AAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVL 431

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV---CGLEV 388
           ID   K+G   +A  V++ +++ ++ P+  T+ +L   +C  G      +L+   C   +
Sbjct: 432 IDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGL 491

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
           E ++  YN+L++  CKAG   QA++    M + G  PD Y++  ++  LC ++++D A +
Sbjct: 492 ELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHS 551

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           + Q                ++D+ I+                      +V+Y V + G  
Sbjct: 552 LLQ---------------EMLDKGIKP--------------------TIVTYNVLMNGFC 576

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI---EL 565
             GR E    L   M    + PN  TY  ++  +C E+N+K    + + ++   +   E 
Sbjct: 577 MSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNEN 636

Query: 566 DY------HTSIRLTKFIFKFHS---------SSSAVNQLVEMCN 595
            Y      H   R  K    FHS         ++S+ N L+ + N
Sbjct: 637 TYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLN 681



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 127/277 (45%), Gaps = 6/277 (2%)

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE 387
           +N+L+  L   G   DA  ++D   E+   PD  T+  ++   C         KL+  + 
Sbjct: 256 YNILLKALCTAGRIKDAHQLFD---EMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMA 312

Query: 388 ---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
              +E + V Y ++++  C  G  + AV++   M+  G   D   F  ++ G C    + 
Sbjct: 313 ARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLA 372

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
            A N +  +     A +   +TA+++ L  AG   +A ++ +    +   +D V+YTV I
Sbjct: 373 AARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLI 432

Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
            G  + G+  EA++++++M    V PN  TY  +    CK+ ++     LL ++    +E
Sbjct: 433 DGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLE 492

Query: 565 LDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           L+  T   L   + K  +   A+  +++M   GL PD
Sbjct: 493 LNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPD 529



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/335 (23%), Positives = 154/335 (45%), Gaps = 14/335 (4%)

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           LD A  L++++ +     N  +Y  L+K    A     A    D + S    PD+V + +
Sbjct: 238 LDEAVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGI 290

Query: 331 LIDCLSKMGSYDDALDVYDGLLE--LKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV 388
           ++     +   + A+ +   +    L+L P +YT  S+++ +C  G+ S   ++V  + +
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYT--SVIALLCDEGQVSDAVRVVEDMVM 348

Query: 389 EA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
                D  V+  ++S FC+ G    A   ++ M  +G   D  ++  L+ GLC A ++ E
Sbjct: 349 HGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKE 408

Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
           A  V Q +      V+A  +T ++D   + G+  +A  +  + + ++   +VV+YT    
Sbjct: 409 AERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSD 468

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
           GL + G    A  L  +M    +  N +TY  ++   CK  N++   R + D+ +A ++ 
Sbjct: 469 GLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKP 528

Query: 566 DYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           D +T   +   + +      A + L EM + G+ P
Sbjct: 529 DVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKP 563



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 44/218 (20%), Positives = 92/218 (42%), Gaps = 4/218 (1%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLN 199
           +M   G  P+ +    ++  L +   +D    +L+E       P  +++N+ +   C   
Sbjct: 520 DMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSG 579

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
            V   K ++  M+ K  +PN   +  L+  +C    +    ++   M++     + N + 
Sbjct: 580 RVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYN 639

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
           +LI G  + R +  A Y   +M++ G      +Y +LI+   + K F+ A    + +  E
Sbjct: 640 ILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKE 699

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
               +   +N  ID      + +  L + D L+E+ LV
Sbjct: 700 RLTAEPDVYNFYIDLSFNEDNLESTLALCDELVEVTLV 737


>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Brachypodium distachyon]
          Length = 814

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 111/508 (21%), Positives = 219/508 (43%), Gaps = 8/508 (1%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           +GR +    + G +          TF + +    R + +G V     EM   G TPN   
Sbjct: 279 SGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVI 338

Query: 157 RNIVMDVLFKIGRVDLGIKVLKE----TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N ++D   + G     I++  E          +++N+    LCK  ++   + ++  M+
Sbjct: 339 CNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEML 398

Query: 213 RKGFYPNVRMF-EILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
             G   +  +F  ++     + GR+    +L+  M+  G   +    T       + RR 
Sbjct: 399 STGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRH 458

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
             A  +W KM++ G   N+ T  +LI G  E K    A   L  + ++G   D + +N++
Sbjct: 459 QEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIM 518

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA- 390
           I    K    ++AL + D ++     PD+Y F S++   C  G+      L+  +++E  
Sbjct: 519 IQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGV 578

Query: 391 --DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
             D+V Y  ++  +CKA    +A +  N ++  G  P+   +  L+ G      I  AI 
Sbjct: 579 QPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIG 638

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           V   +           + +++  +  AG   +A  +F ++      + VV YT+ I+GL 
Sbjct: 639 VLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLC 698

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
           + G+ +EA   + +M+  ++PPN  TY  ++ ++CK  N +   +L  +++ + I  D  
Sbjct: 699 KIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNV 758

Query: 569 TSIRLTKFIFKFHSSSSAVNQLVEMCNL 596
           +   L     +  S   A+ +  E+ ++
Sbjct: 759 SYNTLVTGFSQVDSLDKAIEKAAEISSI 786



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 100/444 (22%), Positives = 187/444 (42%), Gaps = 57/444 (12%)

Query: 61  PSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLT--------------GRFETVRGI 106
           P+++I      W  ++  +   ++ FD M+S   + T              G  E    I
Sbjct: 334 PNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERI 393

Query: 107 VGELARVGCVIKAQTF-LLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           + E+   G  I +  F  +   +  R      V+    EM + G  PN          L 
Sbjct: 394 LEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLC 453

Query: 166 KIGR----VDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
           +  R    V + +K+L++    N  + N  +  LC+  ++    +V+  MV KG   +  
Sbjct: 454 QGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNI 513

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            + I++   CK  +I EA +L   MI  G       +  +I  +  L +++ A +L  +M
Sbjct: 514 TYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQM 573

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
              G  P+VV+Y ++I G+ +AK    A  +L+ L + G  P+ V +N LI    + G+ 
Sbjct: 574 KIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNI 633

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG----------------------RFSLL 379
             A+ V D +  + + P + T+CSL+  +C +G                       ++++
Sbjct: 634 SGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIM 693

Query: 380 PKLVCGL----------------EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
            + +C +                 +  + + Y  L+  +CK+G   +A KL++ M+  G 
Sbjct: 694 IQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGI 753

Query: 424 TPDNYSFVGLLRGLCGARKIDEAI 447
            PDN S+  L+ G      +D+AI
Sbjct: 754 VPDNVSYNTLVTGFSQVDSLDKAI 777



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 102/447 (22%), Positives = 189/447 (42%), Gaps = 25/447 (5%)

Query: 120 QTFLLFLRIYWRGEMYGMVLEAFDEMGRFG-FTPNTFARNIVMDVLFKIGRVDLGIKVLK 178
           +T    L    R    G   + FDEM      TPN ++   ++  L K+G+VD G K+L 
Sbjct: 194 KTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMIKALCKVGKVDDGFKILS 253

Query: 179 E------TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCK 232
           +       Q    + +N+ +  LCK   V     + G M      P++  F IL+N   +
Sbjct: 254 DLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKR 313

Query: 233 MGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVT 292
             R  E   LL  M  LG + +      LID   R      A  L+++MV        VT
Sbjct: 314 SDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVT 373

Query: 293 YTSLIKGFMEAKMFSIAFSFLDMLESEG---HAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
           Y  + +   +      A   L+ + S G   H+   +F++V+   L + G  +  + +  
Sbjct: 374 YNLIARALCKEGEMERAERILEEMLSTGMTIHSG--LFNSVVAGLLQRTGRLESVVRLIS 431

Query: 350 GLLELKLVPDSYTFCSLLSTVCLSGR--------FSLLPKLVCGLEVEADLVVYNALLSY 401
            +++  + P+     +    +C   R          +L K +C      ++   NAL+  
Sbjct: 432 EMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLC-----INIATSNALIHG 486

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVN 461
            C+      A ++  TM++KG   DN ++  +++G C   KI+EA+ +   ++      +
Sbjct: 487 LCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPD 546

Query: 462 AHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYS 521
           A++  +I+    + G+  +A+ L  +  +E    DVVSY   I G  +    ++A    +
Sbjct: 547 AYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLN 606

Query: 522 QMKHIAVPPNAYTYRVMLLSFCKERNI 548
           ++    + PNA  Y  ++  + +  NI
Sbjct: 607 ELMACGLKPNAVIYNALIGGYGRNGNI 633



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/456 (20%), Positives = 199/456 (43%), Gaps = 12/456 (2%)

Query: 158 NIVMDVLFKIGRVDLGIKV---LKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N++MD L K GRVD  I++   ++E+++ P+ ++F I +  L + +    V  ++  M  
Sbjct: 270 NLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEG 329

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G  PN  +   L++  C+ G   EA +L   M++     +   + ++     +   ++ 
Sbjct: 330 LGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMER 389

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFME--AKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           A  + E+M+  G + +   + S++ G ++   ++ S+     +M++  G  P+       
Sbjct: 390 AERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVK-RGMKPNDALMTAC 448

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC----LSGRFSLLPKLVCGLE 387
              L +   + +A+ ++  +LE  L  +  T  +L+  +C    + G   +L  +V    
Sbjct: 449 TKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMV-NKG 507

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
           +E D + YN ++   CK     +A+KL + M+ KGF PD Y F  ++   C   K++EA+
Sbjct: 508 MELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEAL 567

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
           ++   + +     +   +  I+D   +A    KA +     +      + V Y   I G 
Sbjct: 568 HLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGY 627

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
              G    A  +   M+ I + P   TY  ++   C    +   K + +      IE+  
Sbjct: 628 GRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGV 687

Query: 568 HTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
                + + + K      A+N   EM +  + P+++
Sbjct: 688 VGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKI 723



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/206 (22%), Positives = 92/206 (44%), Gaps = 3/206 (1%)

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLD-KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           NALL    + G      K+++ M D K  TP+ YS+  +++ LC   K+D+   +   ++
Sbjct: 197 NALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMIKALCKVGKVDDGFKILSDLI 256

Query: 455 MN--NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
                 +  A  +  ++D L ++GR  +AI+L  R    +    +V++ + I GL    R
Sbjct: 257 HAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDR 316

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
             E   L  +M+ + + PN      ++   C++ +     RL  +++   ++    T   
Sbjct: 317 FGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNL 376

Query: 573 LTKFIFKFHSSSSAVNQLVEMCNLGL 598
           + + + K      A   L EM + G+
Sbjct: 377 IARALCKEGEMERAERILEEMLSTGM 402


>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 120/514 (23%), Positives = 221/514 (42%), Gaps = 58/514 (11%)

Query: 146 GRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVK 205
             F   P +F    V D LF+  R+      L     P  + FN  L +  K+     V 
Sbjct: 32  SHFHSRPPSFEN--VDDALFQFHRM------LCMRHTPPIIQFNKILDSFAKMKHYPTVV 83

Query: 206 DVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF 265
            +   +  K   P+     IL+NCFC +G+I  A+ +L  ++  G        T LI G 
Sbjct: 84  SLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGL 143

Query: 266 RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL 325
               ++  A +  +K++  G   + V+Y +LI G  +      A   L  ++     P++
Sbjct: 144 CLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNV 203

Query: 326 VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLPK 381
           V +N +IDCL K     +A +++  +    +  +  T+ +++   C+ G+ +     L +
Sbjct: 204 VMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNE 263

Query: 382 LVCGLEVEADLVVYNALLSYFCKAGFPNQA---------------VKLYNTMLDK----- 421
           +V    +  D+ +YN L+    K G   +A               V  YNT++D      
Sbjct: 264 MVLK-AINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHV 322

Query: 422 -------GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
                  G TPD +S+  ++  LC  ++++EA+N+Y+ +   N   N   + +++D L +
Sbjct: 323 FNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCK 382

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
           +GR   A  L        +  +V++Y   I GL + G+ ++A  L ++MK   + P+ YT
Sbjct: 383 SGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYT 442

Query: 535 YRVMLLSF-CKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEM 593
             ++L    CK + +K  + L QD++D      YH ++     I   H            
Sbjct: 443 LNILLHGLLCKGKRLKNAQGLFQDLLDK----GYHPNVYTYNIIIYGH------------ 486

Query: 594 CNLGLIPDEMWRKLGLLSDETMTPVSLFDGFVPC 627
           C  GL+ DE +     + D   +P ++    + C
Sbjct: 487 CKEGLL-DEAYALQSKMEDSGCSPNAITFKIIIC 519



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 110/454 (24%), Positives = 206/454 (45%), Gaps = 13/454 (2%)

Query: 100 FETVRGIVGELARVGCVIKAQTFLLFLRI---YWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           FE V   + +  R+ C+      + F +I   + + + Y  V+     +      P+ F 
Sbjct: 41  FENVDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFT 100

Query: 157 RNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            NI+++    +G+++L      K+LK    P+ ++    +  LC    V         ++
Sbjct: 101 LNILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLL 160

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
            +GF  +   +  L+N  CK+G    A QLL  +    T  +V  +  +ID   + + + 
Sbjct: 161 AQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVS 220

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A  L+ +M   G S NVVTY+++I GF      + A  FL+ +  +   PD+  +N L+
Sbjct: 221 EACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLV 280

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADL 392
           D L K G   +A +V   +++  L P+  T+ +L     + G    +   V  + V  D+
Sbjct: 281 DALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTL-----IDGYAKHVFNAVGLMGVTPDV 335

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
             YN +++  CK     +A+ LY  M  K   P+  ++  L+ GLC + +I  A ++   
Sbjct: 336 WSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDE 395

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL-EGG 511
           +       N   + ++++ L + G+  KAI L  +   +    D+ +  + + GLL +G 
Sbjct: 396 MHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGK 455

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
           R + A  L+  +      PN YTY +++   CKE
Sbjct: 456 RLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKE 489



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 6/209 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV S++ MI+ + ++  R E    +  E+ +   V    T+   +    +        + 
Sbjct: 334 DVWSYNIMINRLCKIK-RVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDL 392

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNL-C 196
            DEM   G   N    N +++ L K G++D  I ++ + +     P+  + NI L  L C
Sbjct: 393 IDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLC 452

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
           K   + N + +   ++ KG++PNV  + I++   CK G + EAY L   M   G S +  
Sbjct: 453 KGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAI 512

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
            + ++I         D A  L  +M+  G
Sbjct: 513 TFKIIICALLEKGETDKAEKLLCEMIARG 541


>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
          Length = 700

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 114/484 (23%), Positives = 207/484 (42%), Gaps = 52/484 (10%)

Query: 130 WRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV----LKETQLPNF 185
           WR       L+ FDEM   G  PN    N ++D   K G ++ G ++    L +   PN 
Sbjct: 205 WRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNV 264

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN-----------VRMFE---------- 224
           +++N+ L  LC+   +   + ++  M      P+            R  E          
Sbjct: 265 VTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAE 324

Query: 225 --------------ILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
                         ILLN  CK G++A+A Q+  +++  G   +   +  LI+G+ ++R 
Sbjct: 325 SLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRD 384

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           L  A  ++E+M      P+ +TY +LI G  + +M + A   +  +E  G  P +   N 
Sbjct: 385 LRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNT 444

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---- 386
           LID     G  +    V   + +  +  D  +F S++   C +G+   +P+ V  L    
Sbjct: 445 LIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGK---IPEAVAILDDMI 501

Query: 387 --EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
             +V  +  VYN+++  + ++G   QA+ L   M + G +    ++  LL+GLC + +ID
Sbjct: 502 YKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQID 561

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYT--V 502
           EA  +   +       +   +  I+      G   KA++L +   + KY +     T   
Sbjct: 562 EAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQE--MNKYGIRPTLRTCHT 619

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
            +  L   GR  +   LY QM H  V P++  Y +M+ ++ +  N   V  L +++ +  
Sbjct: 620 LVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKG 679

Query: 563 IELD 566
           I  D
Sbjct: 680 IAFD 683



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 106/466 (22%), Positives = 197/466 (42%), Gaps = 46/466 (9%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE------TQLPNFLSFNIA 191
           V  AF  +   G  P+TFA N V+      G +D+ + +L+          P+  S+N+ 
Sbjct: 141 VRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNVV 200

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           +  L +    S+   V   MV  G  PN   +  +++   K G +   ++L   M+  G 
Sbjct: 201 IAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGP 260

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
             +V  + VL+ G  R  R+D    L ++M  +   P+  TY+ L  G           S
Sbjct: 261 KPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLS 320

Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
                  +G        ++L++ L K G    A  V++ L+   LVP +  + +L++  C
Sbjct: 321 LFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYC 380

Query: 372 ----LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQA---------------V 412
               L G F +  ++     +  D + YNAL++  CK     +A               V
Sbjct: 381 QVRDLRGAFCIFEQMK-SRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSV 439

Query: 413 KLYNTMLD--------------------KGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           + +NT++D                    KG   D  SF  +++  C   KI EA+ +   
Sbjct: 440 ETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDD 499

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           ++  + A NA V+ +I+D  IE+G   +A+ L  +         +V+Y + ++GL    +
Sbjct: 500 MIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQ 559

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
            +EA  L   +++  + P+  +Y  ++ + C + +      LLQ++
Sbjct: 560 IDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEM 605



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 97/466 (20%), Positives = 184/466 (39%), Gaps = 89/466 (19%)

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG------------- 264
           P++    +LL     +GR A+     GL++  G      AW  ++               
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179

Query: 265 FRRLRRLDMA------------GYLW------------EKMVQNGCSPNVVTYTSLIKGF 300
            RR+ R + A              LW            ++MV  G +PN +TY ++I G 
Sbjct: 180 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGH 239

Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
           ++       F   D +  +G  P++V +NVL+  L + G  D+   + D +    ++PD 
Sbjct: 240 VKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDG 299

Query: 361 YTF----------------------------------CS-LLSTVCLSGRFSLLPKLVCG 385
           +T+                                  CS LL+ +C  G+ +   K V  
Sbjct: 300 FTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVA-KAKQVFE 358

Query: 386 LEVEADL----VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
           + V   L    V+YN L++ +C+      A  ++  M  +   PD+ ++  L+ GLC   
Sbjct: 359 MLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLE 418

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHT--AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
            + +A ++   + M    V+  V T   ++D    AG+  K   +      +    DV+S
Sbjct: 419 MVTKAEDLV--MEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVIS 476

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           +   ++   + G+  EA  +   M +  V PNA  Y  ++ ++ +  + +    L++ + 
Sbjct: 477 FGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMK 536

Query: 560 DARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMC----NLGLIPD 601
           ++ +      SI     + K    SS +++  E+     N GL PD
Sbjct: 537 NSGVS----ASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPD 578


>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
 gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
          Length = 833

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 131/583 (22%), Positives = 240/583 (41%), Gaps = 65/583 (11%)

Query: 83  VQSFDHMISVVTRLTGRFETVRGIVG-----ELARVGCVIKAQ----TFLLFLRIYWRGE 133
           V +F+H+++ V+R +GR  T+   +G      + R  C  K      T+ + +  + R  
Sbjct: 151 VTAFNHLLTAVSRASGRHSTLESQLGISLFDRMVR-ECSDKVAPDRCTYSILIGCFCRMG 209

Query: 134 MYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL-----KETQLPNFLSF 188
                   F  + + G+  N    N ++  L    R+D    +L     +    PN +S+
Sbjct: 210 RLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNILLWRMPEFGCTPNVVSY 269

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVR-KGFY--PNVRMFEILLNCFCKMGRIAEAYQLLGL 245
           N  +   C  N      +++ +M   +G    P+V  +  ++N F + G++ +AY L   
Sbjct: 270 NTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQ 329

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           MI  G    V  +  +IDG  + + +D A  ++++M+  G  P+  TY  LI G++    
Sbjct: 330 MIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGK 389

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY---- 361
           +      L+ + +    PD   + +L+D L K G   +A +++D ++   + PD+     
Sbjct: 390 WKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEA 449

Query: 362 -----------------TFCSLLSTVCLSGR-------FSLLPKLVCGL----------- 386
                             + +L+  +C  GR       F+ +   V GL           
Sbjct: 450 VCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEE 509

Query: 387 --------EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
                    +  D+VV+N L+   C+ G   +A +L   ML  G  PD  S+  L+ G C
Sbjct: 510 LVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHC 569

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
              + DEA  +   +V      N   +  ++    +A R   A  L R  ++     DVV
Sbjct: 570 LTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVV 629

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           +Y   + GL + GR  EA  LY  M +     + YTY ++L   CK   +    ++ Q +
Sbjct: 630 TYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSL 689

Query: 559 IDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
               ++L   T   +   + K      A++    +   GL+PD
Sbjct: 690 CSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPD 732



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 96/376 (25%), Positives = 180/376 (47%), Gaps = 16/376 (4%)

Query: 136 GMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIAL 192
            M+ EA   FD+M + G +PN      ++D L K+GRVD  I  LK  Q+ N       +
Sbjct: 444 AMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAI--LKFNQMIN------EV 495

Query: 193 CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
             LC +      ++++  M+ +G   +V +F  L+   C+ GR+ EA +L+ LM+ +G  
Sbjct: 496 YGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVR 555

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
             V ++  L+DG     R D A  L + MV  G  PN  TY +L+ G+ +A+    A+S 
Sbjct: 556 PDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSL 615

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV-- 370
           L  +   G  PD+V +N ++  L + G + +A ++Y  ++  +   D YT+  +L+ +  
Sbjct: 616 LREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCK 675

Query: 371 --CLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
             C+   F +   L C   ++  ++ +N ++    K G    A+ L+ T+   G  PD  
Sbjct: 676 NNCVDEAFKMFQSL-CSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVE 734

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
           ++  +   L     ++E   ++  +  N  A N+ +  A+V R +  G   +A     + 
Sbjct: 735 TYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKL 794

Query: 489 IVEKYPLDVVSYTVAI 504
             + + L+  + ++ I
Sbjct: 795 DEKNFSLEASTASMLI 810



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 105/453 (23%), Positives = 199/453 (43%), Gaps = 59/453 (13%)

Query: 152 PNTFARNIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDV 207
           P+  + N V++  F+ G+VD    L ++++     P+ +++N  +  LCK   V   K V
Sbjct: 302 PDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAV 361

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLID---- 263
              M+ KG  P+   +  L++ +   G+  E  +LL  M T         + +L+D    
Sbjct: 362 FQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCK 421

Query: 264 -----------------GFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME---- 302
                            G +    +D A  +++KM Q G SPNVV Y +LI    +    
Sbjct: 422 NGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRV 481

Query: 303 -----------------------AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
                                   K   + F  LD    +G   D+V  N L+  L + G
Sbjct: 482 DDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLD----QGIRLDVVVFNTLMCDLCREG 537

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV---CGLEVEADLVVYN 396
              +A  + + +L + + PD  ++ +L+   CL+GR     KL+     + ++ +   YN
Sbjct: 538 RVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYN 597

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            LL  +CKA   + A  L   ML  G TPD  ++  +L GL    +  EA  +Y  ++ +
Sbjct: 598 TLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINS 657

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
               + + +  I++ L +     +A ++F+    +   L ++++ + I  LL+GG+ E+A
Sbjct: 658 RTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDA 717

Query: 517 YILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
             L++ +    + P+  TY ++  +  KE +++
Sbjct: 718 MDLFATISAYGLVPDVETYCLIAENLIKEGSLE 750



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/352 (21%), Positives = 150/352 (42%), Gaps = 46/352 (13%)

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +++LI  F R+ RL+    ++  +++ G   N + +  L+KG  +AK    A + L    
Sbjct: 198 YSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNILLWRM 257

Query: 318 SE-GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
            E G  P++V +N L+         ++AL++      L ++ D                 
Sbjct: 258 PEFGCTPNVVSYNTLVKGFCNENRAEEALEL------LHVMADDQ--------------- 296

Query: 377 SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
                   GL    D+V YN +++ F + G  ++A  L+  M+D+G  PD  ++  ++ G
Sbjct: 297 --------GLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDG 348

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
           LC A+ +D A  V+Q ++      +   +  ++   +  G+  + ++L           D
Sbjct: 349 LCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPD 408

Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
              Y + +  L + GR  EA  ++  +    + P+A     + + F K R   +   ++ 
Sbjct: 409 CFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCI-FDKMRQQGLSPNVVN 467

Query: 557 --DVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRK 606
              +IDA  +L      R+   I KF+     +N++  +C +     E W K
Sbjct: 468 YGALIDALCKLG-----RVDDAILKFN---QMINEVYGLCTV-----EKWEK 506



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 60/272 (22%), Positives = 111/272 (40%), Gaps = 14/272 (5%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           LTGR +    ++  +  +G      T+   L  Y +            EM   G TP+  
Sbjct: 570 LTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVV 629

Query: 156 ARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
             N ++  LF+ GR     +L + ++      +  ++NI L  LCK N V     +   +
Sbjct: 630 TYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSL 689

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
             KG   ++  F I++    K G+  +A  L   +   G    V  + ++ +   +   L
Sbjct: 690 CSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSL 749

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           +  G L+  M +NG +PN     +L++ F+     S A ++L  L+ +  + +    ++L
Sbjct: 750 EELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKLDEKNFSLEASTASML 809

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
           I   S+ G Y             K +P+ Y F
Sbjct: 810 ISLYSR-GEYQQL---------AKSLPEKYRF 831


>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Glycine max]
          Length = 664

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 131/533 (24%), Positives = 236/533 (44%), Gaps = 36/533 (6%)

Query: 114 GC--VIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD 171
           GC   +K    LL   +   G  + M+   ++ M   G  PN F  N+++  L K G++D
Sbjct: 138 GCKPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEGMEPNVFTYNVLLKALCKNGKLD 197

Query: 172 LGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILL 227
              K+L E      +P+ +S+   +  +C+   V   ++V      +G    V +   L+
Sbjct: 198 GACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEAREVARRFGAEGV---VSVCNALI 254

Query: 228 NCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCS 287
              C+ GR+ E + L+  M+  G   +V +++ +I     +  +++A  +  KM++ GC 
Sbjct: 255 CGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCR 314

Query: 288 PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
           PNV T++SL+KG+              ++  EG  P++V +N L++ L   G+  +A+DV
Sbjct: 315 PNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDV 374

Query: 348 YDGLLELKLV--PDSYTFCSLLSTVC----LSGRFSLLPKLV-CGLEVEADLVVYNALLS 400
             G +E      P+  T+ +L+        L G   +  K+V CG  V  ++VVY +++ 
Sbjct: 375 C-GRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCG--VRPNVVVYTSMVD 431

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
             CK    +QA +L + M   G  P   +F   ++GLC   ++  A+ V   +       
Sbjct: 432 VLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLP 491

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
           +   +  ++D L       +A +L R     K  L++V+Y   + G    G+ E    + 
Sbjct: 492 DTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVL 551

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL--DYHTSIRLTKFIF 578
            +M    V P+A T  V++ ++ K   ++   + L D I A  EL  D      L   I 
Sbjct: 552 GRMLVNGVKPDAITVNVVIYAYSKLGKVRTAIQFL-DRITAGKELCPDIIAHTSLLWGIC 610

Query: 579 KFHSSSSAVNQLVEMCNLGLIPD-EMW--------RKLGLLSDETMTPVSLFD 622
                  A+  L +M N G+ P+   W        +KLG      M P+ + D
Sbjct: 611 NSLGIEEAIVYLNKMLNKGIFPNIATWDVLVRGFFKKLG-----HMGPIRILD 658



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 125/494 (25%), Positives = 205/494 (41%), Gaps = 50/494 (10%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWR-GEM 134
           +R    D  S+  +++ +    GR E  R +       G V      +  L    R GE+
Sbjct: 208 KRGCVPDGVSYTTVVAAMCE-DGRVEEAREVARRFGAEGVVSVCNALICGLCREGRVGEV 266

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNI 190
           +G++    DEM   G  PN  + + V+  L  +G V+L + VL    +    PN  +F+ 
Sbjct: 267 FGLM----DEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSS 322

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM-ITL 249
            +        V     +  +MV +G  PNV ++  LLN  C  G +AEA  + G M    
Sbjct: 323 LMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDC 382

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
               +V  ++ L+ GF +   L  A  +W KMV  G  PNVV YTS++    +  MF  A
Sbjct: 383 FCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQA 442

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
           +  +D + ++G  P +V  N  I  L   G    A+ V D +     +PD+ T+  LL  
Sbjct: 443 YRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDG 502

Query: 370 VCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
           +          +L+  LE   VE +LV YN ++  F   G     +++   ML  G  PD
Sbjct: 503 LFSVNELKEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPD 562

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
                        A  ++  I  Y  +                      G+   AIQ   
Sbjct: 563 -------------AITVNVVIYAYSKL----------------------GKVRTAIQFLD 587

Query: 487 RAIVEKYPL-DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
           R    K    D++++T  + G+      EEA +  ++M +  + PN  T+ V++  F K+
Sbjct: 588 RITAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKGIFPNIATWDVLVRGFFKK 647

Query: 546 RNIKMVKRLLQDVI 559
                  R+L D++
Sbjct: 648 LGHMGPIRILDDIL 661



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/338 (21%), Positives = 149/338 (44%), Gaps = 6/338 (1%)

Query: 232 KMGRIAEA---YQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSP 288
           K+GR +E    + +L  M       S +++  +++ ++     D A  ++ ++ + GC P
Sbjct: 82  KLGRNSELDALHYILHQMKIERIPCSQDSFICVLNSYKNSGLGDRALKMFYRIKEFGCKP 141

Query: 289 NVVTYTSLIKGFM--EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALD 346
            V  Y  L+   +      F +  +  + +  EG  P++  +NVL+  L K G  D A  
Sbjct: 142 TVKIYNHLLDALLGESGNKFHMIGAVYENMRGEGMEPNVFTYNVLLKALCKNGKLDGACK 201

Query: 347 VYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAG 406
           +   + +   VPD  ++ ++++ +C  GR     ++      E  + V NAL+   C+ G
Sbjct: 202 LLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEAREVARRFGAEGVVSVCNALICGLCREG 261

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
              +   L + M+  G  P+  S+  ++  L    +++ A+ V   ++      N H  +
Sbjct: 262 RVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFS 321

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM-KH 525
           +++      GR  + + L+R  ++E    +VV Y   + GL   G   EA  +  +M K 
Sbjct: 322 SLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKD 381

Query: 526 IAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
               PN  TY  ++  F K  +++    +   +++  +
Sbjct: 382 CFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGV 419


>gi|4455203|emb|CAB36526.1| putative protein [Arabidopsis thaliana]
 gi|7269532|emb|CAB79535.1| putative protein [Arabidopsis thaliana]
          Length = 439

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 188/398 (47%), Gaps = 10/398 (2%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKETQ-------LPNFLSFNIALCNLCKLNDVSNV 204
           P+    N V+  + K+   D+ I + K  +        P+  + NI +   C+    S+ 
Sbjct: 8   PSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSA 67

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
              +G M++ G  P++     L+N FC    I +A  + G M  +G    V   T+LID 
Sbjct: 68  LSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDT 127

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
             + R +  A  + ++M   G SPNVVTY+SLI G  ++   + A   L  ++S+   P+
Sbjct: 128 LCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPN 187

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPK--- 381
           ++  + LID  +K G       VY  ++++ + P+ +T+ SL+  +C+  R     K   
Sbjct: 188 VITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLD 247

Query: 382 LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
           L+       ++V Y+ L + F K+   +  +KL + M  +G   +  S   L++G   A 
Sbjct: 248 LMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAG 307

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYT 501
           KID A+ V+  +  N    N   +  ++  L   G   KA+  F      +  LD+++YT
Sbjct: 308 KIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYT 367

Query: 502 VAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
           + I G+ +    +EAY L+ ++K   V P+   Y +M+
Sbjct: 368 IMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMI 405



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 155/335 (46%), Gaps = 18/335 (5%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLN 199
           +M + G   +     I++D L K   V   ++VLK  +     PN ++++  +  LCK  
Sbjct: 108 QMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSG 167

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
            +++ +  +  M  K   PNV  F  L++ + K G++++   +  +MI +    +V  ++
Sbjct: 168 RLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYS 227

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
            LI G     R+D A  + + M+  GC+PNVVTY++L  GF ++         LD +   
Sbjct: 228 SLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQR 287

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG----- 374
           G A + V  N LI    + G  D AL V+  +    L+P+  ++  +L+ +  +G     
Sbjct: 288 GVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKA 347

Query: 375 --RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
             RF  + K    L    D++ Y  ++   CKA    +A  L+  +  K   PD  ++  
Sbjct: 348 LSRFEHMQKTRNDL----DIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTI 403

Query: 433 LLRGL--CGARKIDEAIN-VYQGIVMNNPAVNAHV 464
           ++  L   G R   +A+N  YQ  V  N +  A V
Sbjct: 404 MIAELNRAGMRTEADALNRFYQKHVRQNESAPAEV 438



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/398 (21%), Positives = 168/398 (42%), Gaps = 49/398 (12%)

Query: 182 LPNFLSFNIALCNLCKLN--DV-----SNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
           LP+ + FN  L  + K+   DV       +++  G+ +     P++    IL+NCFC+  
Sbjct: 7   LPSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEIS----PDLYTCNILVNCFCRCF 62

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
           + + A   LG                                   KM++ G  P++VT +
Sbjct: 63  QPSSALSYLG-----------------------------------KMMKLGIEPDIVTAS 87

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
           SL+ GF  +     A      +E  G   D+V   +LID L K      AL+V   + + 
Sbjct: 88  SLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDR 147

Query: 355 KLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQA 411
            + P+  T+ SL++ +C SGR +   + +  ++   +  +++ ++AL+  + K G  ++ 
Sbjct: 148 GISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKV 207

Query: 412 VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
             +Y  M+     P+ +++  L+ GLC   ++DEAI +   ++      N   ++ + + 
Sbjct: 208 DSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANG 267

Query: 472 LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
             ++ R    I+L           + VS    I+G  + G+ + A  ++  M    + PN
Sbjct: 268 FFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPN 327

Query: 532 AYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
             +Y ++L        ++      + +   R +LD  T
Sbjct: 328 IRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIIT 365



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/322 (23%), Positives = 145/322 (45%), Gaps = 10/322 (3%)

Query: 288 PNVVTYTSLIKGFMEAKMFSIAFSFLDMLE-SEGH--APDLVFHNVLIDCLSKMGSYDDA 344
           P++V +  ++    + +M+ +  +    +E +EG   +PDL   N+L++C  +      A
Sbjct: 8   PSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSA 67

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSY 401
           L     +++L + PD  T  SL++  CLS        +   +E   ++ D+VV   L+  
Sbjct: 68  LSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDT 127

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVN 461
            CK      A+++   M D+G +P+  ++  L+ GLC + ++ +A        M++  +N
Sbjct: 128 LCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHE--MDSKKIN 185

Query: 462 AHVHT--AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            +V T  A++D   + G+  K   +++  I      +V +Y+  I GL    R +EA  +
Sbjct: 186 PNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKM 245

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK 579
              M      PN  TY  +   F K   +    +LL D+    +  +  +   L K  F+
Sbjct: 246 LDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQ 305

Query: 580 FHSSSSAVNQLVEMCNLGLIPD 601
                 A+     M + GLIP+
Sbjct: 306 AGKIDLALGVFGYMTSNGLIPN 327



 Score = 47.4 bits (111), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 41/187 (21%), Positives = 75/187 (40%), Gaps = 8/187 (4%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG 173
           GC     T+      +++       ++  D+M + G   NT + N ++   F+ G++DL 
Sbjct: 253 GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLA 312

Query: 174 IKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
           + V         +PN  S+NI L  L    +V         M +     ++  + I+++ 
Sbjct: 313 LGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHG 372

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRL---RRLDMAGYLWEKMV-QNG 285
            CK   + EAY L   +          A+T++I    R       D     ++K V QN 
Sbjct: 373 MCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNRFYQKHVRQNE 432

Query: 286 CSPNVVT 292
            +P  V+
Sbjct: 433 SAPAEVS 439


>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 754

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 111/474 (23%), Positives = 217/474 (45%), Gaps = 16/474 (3%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
            GR +    +  E+A    V+   T+ + +  Y         ++   EM   G   N  A
Sbjct: 266 AGRIKDAHQLFDEMASPPDVV---TYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVA 322

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQLPNFL----SFNIALCNLCKLNDVSNVKDVIGMMV 212
              V+ +L   G+V   ++V+++  +   +     F   +   C+  D++  ++    M 
Sbjct: 323 YTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQ 382

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
           ++G   +   +  L+N  C+ G + EA ++L  M   G  +    +TVLIDG+ ++ ++ 
Sbjct: 383 KRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMT 442

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A  +  KMVQ   +PNVVTYT+L  G  +      A   L  + S+G   ++  +N LI
Sbjct: 443 EAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLI 502

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF----SLLPKLVCGLEV 388
           + L K G+ + A+     + E  L PD YT+ +++  +C S       SLL +++    +
Sbjct: 503 NGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEML-DKGI 561

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
           +  +V YN L++ FC +G      +L   ML+K   P+  ++  L++  C  + +     
Sbjct: 562 KPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTE 621

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           +Y+G++      N + +  ++    +A    +A+      I + + L   SY   IR L 
Sbjct: 622 IYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLN 681

Query: 509 EGGRTEEAYILYSQMK--HIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
           +  +  EA  L+ +M+   +   P+ Y + +  LSF  E N++    L  ++++
Sbjct: 682 KKKKFTEARRLFEKMRKERLTAEPDVYNFYID-LSF-NEDNLESTLALCDELVE 733



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 109/465 (23%), Positives = 207/465 (44%), Gaps = 57/465 (12%)

Query: 153 NTFARNIVMDVLFKIGRVDLGIKVLKE-TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
           NT + NI++  L   GR+    ++  E    P+ +++ I +   C L+++     ++  M
Sbjct: 252 NTCSYNILLKALCTAGRIKDAHQLFDEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEM 311

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
             +G   N   +  ++   C  G++++A +++  M+  G  L    +T ++ GF R   L
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDL 371

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
             A   +++M + G + + VTYT+LI G   A     A   L  +E +G   D V + VL
Sbjct: 372 AAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVL 431

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV---CGLEV 388
           ID   K+G   +A  V++ +++ ++ P+  T+ +L   +C  G      +L+   C   +
Sbjct: 432 IDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGL 491

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
           E ++  YN+L++  CKAG   QA++    M + G  PD Y++  ++  LC ++++D A +
Sbjct: 492 ELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHS 551

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           + Q                ++D+ I+                      +V+Y V + G  
Sbjct: 552 LLQ---------------EMLDKGIKPT--------------------IVTYNVLMNGFC 576

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI---EL 565
             GR E    L   M    + PN  TY  ++  +C E+N+K    + + ++   +   E 
Sbjct: 577 MSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNEN 636

Query: 566 DY------HTSIRLTKFIFKFHS---------SSSAVNQLVEMCN 595
            Y      H   R  K    FHS         ++S+ N L+ + N
Sbjct: 637 TYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLN 681



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/335 (23%), Positives = 154/335 (45%), Gaps = 14/335 (4%)

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           LD A  L++++ +     N  +Y  L+K    A     A    D + S    PD+V + +
Sbjct: 238 LDEAVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGI 290

Query: 331 LIDCLSKMGSYDDALDVYDGLLE--LKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV 388
           ++     +   + A+ +   +    L+L P +YT  S+++ +C  G+ S   ++V  + +
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYT--SVIALLCDEGQVSDAVRVVEDMVM 348

Query: 389 EA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
                D  V+  ++S FC+ G    A   ++ M  +G   D  ++  L+ GLC A ++ E
Sbjct: 349 HGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKE 408

Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
           A  V Q +      V+A  +T ++D   + G+  +A  +  + + ++   +VV+YT    
Sbjct: 409 AERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSD 468

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
           GL + G    A  L  +M    +  N +TY  ++   CK  N++   R + D+ +A ++ 
Sbjct: 469 GLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKP 528

Query: 566 DYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           D +T   +   + +      A + L EM + G+ P
Sbjct: 529 DVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKP 563



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 127/277 (45%), Gaps = 6/277 (2%)

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE 387
           +N+L+  L   G   DA  ++D   E+   PD  T+  ++   C         KL+  + 
Sbjct: 256 YNILLKALCTAGRIKDAHQLFD---EMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMA 312

Query: 388 ---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
              +E + V Y ++++  C  G  + AV++   M+  G   D   F  ++ G C    + 
Sbjct: 313 ARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLA 372

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
            A N +  +     A +   +TA+++ L  AG   +A ++ +    +   +D V+YTV I
Sbjct: 373 AARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLI 432

Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
            G  + G+  EA++++++M    V PN  TY  +    CK+ ++     LL ++    +E
Sbjct: 433 DGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLE 492

Query: 565 LDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           L+  T   L   + K  +   A+  +++M   GL PD
Sbjct: 493 LNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPD 529



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 44/218 (20%), Positives = 92/218 (42%), Gaps = 4/218 (1%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLN 199
           +M   G  P+ +    ++  L +   +D    +L+E       P  +++N+ +   C   
Sbjct: 520 DMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSG 579

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
            V   K ++  M+ K  +PN   +  L+  +C    +    ++   M++     + N + 
Sbjct: 580 RVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYN 639

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
           +LI G  + R +  A Y   +M++ G      +Y +LI+   + K F+ A    + +  E
Sbjct: 640 ILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKE 699

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
               +   +N  ID      + +  L + D L+E+ LV
Sbjct: 700 RLTAEPDVYNFYIDLSFNEDNLESTLALCDELVEVTLV 737


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/388 (25%), Positives = 188/388 (48%), Gaps = 11/388 (2%)

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW--- 278
           + ++L++ + K GR+ +A +++ +M   G + S+     L+   + L R D    LW   
Sbjct: 176 VLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALL---KDLLRADAMALLWKVR 232

Query: 279 EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
           E MV  G SP+V TY++LI+ + + + F  A   L  +   G   + V +NVLI  L + 
Sbjct: 233 EFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRS 292

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF----SLLPKLVCGLEVEADLVV 394
           G+ ++A      + +  LVPD +T+ +L++ +C S R     +LL ++ C  E++ ++VV
Sbjct: 293 GAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCA-ELKPNVVV 351

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           Y  L+  F + G  ++A K+   M+  G  P+  ++  L+RGLC   ++D A  + + +V
Sbjct: 352 YANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMV 411

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
            ++   +   +  I++          A +L           +V +Y++ I GL + G  E
Sbjct: 412 RDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPE 471

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLT 574
           +A  L  +M    + PNA+ Y  ++  +C+E N+ +   +   +    +  D +    L 
Sbjct: 472 KASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLI 531

Query: 575 KFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
             + K      +     +M   GL+P+E
Sbjct: 532 FGLSKVGRVEESTKYFAQMQERGLLPNE 559



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 124/570 (21%), Positives = 232/570 (40%), Gaps = 60/570 (10%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRG--------- 132
           DV ++  +I    ++   F+T + ++ E+   GC +   T+ + +    R          
Sbjct: 243 DVYTYSTLIEAYCKVR-EFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGF 301

Query: 133 ----EMYGMVLEAF----------------------DEMGRFGFTPNTFARNIVMDVLFK 166
               E YG+V + F                      DEM      PN      ++D   +
Sbjct: 302 KKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMR 361

Query: 167 IGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
            G  D   K++KE       PN ++++  +  LCK+  +     ++  MVR    P+   
Sbjct: 362 EGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTIT 421

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           + +++    +     +A++LL  M   G S +V  ++++I G  +    + A  L E+M 
Sbjct: 422 YNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMT 481

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
             G  PN   Y  LI G+      S+A    D +      PDL  +N LI  LSK+G  +
Sbjct: 482 TKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVE 541

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALL 399
           ++   +  + E  L+P+ +T+  L+     +G      +LV  +    ++ + V+Y  LL
Sbjct: 542 ESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLL 601

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
             + K+    +    + +MLD+G   DN  +  L+  L  +  ++ A  V  GI  N   
Sbjct: 602 ESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSV 661

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            + HV+++++  L +     KA  +      +    ++V Y   I GL + G    A  +
Sbjct: 662 PDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNV 721

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLT----- 574
           ++ +    + PN  TY  ++   CK  +I     L  +++   I  D      LT     
Sbjct: 722 FNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSS 781

Query: 575 ------------KFIFKFHSSSSAVNQLVE 592
                       +   + H+S S+ N LV+
Sbjct: 782 AGDLEQAMFLIEEMFLRGHASISSFNNLVD 811



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 101/488 (20%), Positives = 217/488 (44%), Gaps = 7/488 (1%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET 180
           T+   +  Y +   +    +   EM   G   NT   N+++  L + G V+      K+ 
Sbjct: 246 TYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDM 305

Query: 181 Q----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
           +    +P+  ++   +  LCK    +  K ++  M      PNV ++  L++ F + G  
Sbjct: 306 EDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNA 365

Query: 237 AEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSL 296
            EA++++  M+  G   +   +  L+ G  ++ ++D A  L ++MV++   P+ +TY  +
Sbjct: 366 DEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLI 425

Query: 297 IKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
           I+G         AF  L  +E+ G +P++  ++++I  L + G  + A D+ + +    L
Sbjct: 426 IEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGL 485

Query: 357 VPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVK 413
            P+++ +  L+S  C  G  SL  ++   +  + V  DL  YN+L+    K G   ++ K
Sbjct: 486 KPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTK 545

Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
            +  M ++G  P+ +++ GL+ G      ++ A  + Q ++      N  ++  +++   
Sbjct: 546 YFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYF 605

Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
           ++    K    F+  + +   LD   Y + I  L   G  E A+ + S ++     P+ +
Sbjct: 606 KSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVH 665

Query: 534 TYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEM 593
            Y  ++   CK  + +    +L ++    ++ +      L   + K    S A N    +
Sbjct: 666 VYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSI 725

Query: 594 CNLGLIPD 601
              GL+P+
Sbjct: 726 LAKGLVPN 733



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 104/451 (23%), Positives = 207/451 (45%), Gaps = 7/451 (1%)

Query: 158 NIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           ++++D   K GRV    +V+         P+    N  L +L + + ++ +  V   MV 
Sbjct: 178 DVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVG 237

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G  P+V  +  L+  +CK+     A ++L  M   G  L+   + VLI G  R   ++ 
Sbjct: 238 AGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEE 297

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A    + M   G  P+  TY +LI G  +++  + A + LD +      P++V +  LID
Sbjct: 298 AFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLID 357

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG---RFSLLPKLVCGLEVEA 390
              + G+ D+A  +   ++   + P+  T+ +L+  +C  G   R SLL K +       
Sbjct: 358 GFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRP 417

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           D + YN ++    +      A +L + M + G +P+ Y++  ++ GLC + + ++A ++ 
Sbjct: 418 DTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLL 477

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
           + +       NA V+  ++      G    A ++F +        D+  Y   I GL + 
Sbjct: 478 EEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKV 537

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
           GR EE+   ++QM+   + PN +TY  ++  + K  +++  ++L+Q ++D  ++ +    
Sbjct: 538 GRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIY 597

Query: 571 IRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           I L +  FK        +    M + G++ D
Sbjct: 598 IDLLESYFKSDDIEKVSSTFKSMLDQGVMLD 628



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 119/529 (22%), Positives = 216/529 (40%), Gaps = 57/529 (10%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           +G  E    ++ E+   G    A  +   +  Y R     +  E FD+M +    P+ + 
Sbjct: 467 SGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYC 526

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N ++  L K+GRV+   K   + Q    LPN  +++  +    K  D+ + + ++  M+
Sbjct: 527 YNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRML 586

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
             G  PN  ++  LL  + K   I +       M+  G  L    + +LI        ++
Sbjct: 587 DTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNME 646

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A  +   + +NG  P+V  Y+SLI G  +      AF  LD +  +G  P++V +N LI
Sbjct: 647 AAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALI 706

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADL 392
           D L K G    A +V++ +L   LVP+  T+ SL+                         
Sbjct: 707 DGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGS---------------------- 744

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
                     CK G  + A  LYN ML  G TPD + +  L  G   A  +++A+ + + 
Sbjct: 745 ----------CKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEE 794

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           + +   A  +  +  +VD   + G+  + ++L    +      + ++    I GL E G+
Sbjct: 795 MFLRGHASISSFNN-LVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGK 853

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRV------------------MLLSFCKERNIKMVKRL 554
             E + ++ +++       A  +                    M+   CKE N+     +
Sbjct: 854 LSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKA-LM 912

Query: 555 LQDVIDAR-IELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
           L+DVI A+   +   + + +   + +    S A+N L EM   G+ P E
Sbjct: 913 LRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICPSE 961



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/423 (21%), Positives = 187/423 (44%), Gaps = 14/423 (3%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLN 199
           +M R    P+T   N++++  F+        ++L E +     PN  +++I +  LC+  
Sbjct: 409 QMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSG 468

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
           +     D++  M  KG  PN  ++  L++ +C+ G ++ A ++   M  +     +  + 
Sbjct: 469 EPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYN 528

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
            LI G  ++ R++ +   + +M + G  PN  TY+ LI G+++      A   +  +   
Sbjct: 529 SLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDT 588

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
           G  P+ V +  L++   K    +     +  +L+  ++ D+  +  L+  +  SG     
Sbjct: 589 GLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAA 648

Query: 380 PKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
            +++ G+E      D+ VY++L+S  CK     +A  + + M  KG  P+   +  L+ G
Sbjct: 649 FRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDG 708

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
           LC +  I  A NV+  I+      N   +T+++D   + G    A  L+   +      D
Sbjct: 709 LCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPD 768

Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQM---KHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
              Y+V   G    G  E+A  L  +M    H ++     ++  ++  FCK   ++   +
Sbjct: 769 AFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASIS----SFNNLVDGFCKRGKMQETLK 824

Query: 554 LLQ 556
           LL 
Sbjct: 825 LLH 827


>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
 gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
          Length = 844

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 106/464 (22%), Positives = 203/464 (43%), Gaps = 12/464 (2%)

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           ++ ++   G    + T+   +  Y    M+   +  F +M   G  P     N  +  LF
Sbjct: 302 VLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALF 361

Query: 166 KIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLND--VSNVKDVIGMMVRKGFYPN 219
           K GR +    +     L    P+ +S++  L       D  +++V ++  +M+ KG  PN
Sbjct: 362 KHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPN 421

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
             +F IL+N + + G + +A  +   M   G       +  +I    R+ RLD A + + 
Sbjct: 422 KHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFN 481

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL-DMLESEGHAPDLVFHNVLIDCLSKM 338
            MV  G  P+   Y  LI+G         A   + +M+  +   P + + + +I+ L K 
Sbjct: 482 HMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKE 541

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVV 394
           G   +  D+ D +++    P+  TF SL+   CL G     F+LL  +   + +E +  +
Sbjct: 542 GRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMA-SIGIEPNCYI 600

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           Y  L+  +CK G  + A+ ++  ML KG  P +  +  +L GL  AR+   A  ++  ++
Sbjct: 601 YGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMI 660

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
            +   V+ H +  ++  L       +A  L  +        D++++ + I  + + GR +
Sbjct: 661 ESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQ 720

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           EA  L+  +    + PN  TY +M+ +  KE + +    L   V
Sbjct: 721 EAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISV 764



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 105/497 (21%), Positives = 217/497 (43%), Gaps = 60/497 (12%)

Query: 132 GEMYGMVLEAFDEMGRFG----FTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLP 183
           G+   + +E F  M R+       P     NI++D   ++ R DLG+    ++LK    P
Sbjct: 150 GDAPALAIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGP 209

Query: 184 NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
           +  S+++ +    K  +V     +   M+ +G  P + +   ++   CKM  + +A  ++
Sbjct: 210 DDFSYSL-IYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIV 268

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
             M+  G +  +  ++++IDG  + + +D A  + E+MV+ G  PN +TY SLI G+  +
Sbjct: 269 QKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSIS 328

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
            M++ +      + S G  P +   N  I  L K G  ++A  ++D ++     PD  ++
Sbjct: 329 GMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISY 388

Query: 364 CSLL------STVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
            ++L      +  CL+   ++   L+    +  +  V+N L++ + + G  ++A+ ++  
Sbjct: 389 STMLHGYATATDSCLADVHNIF-NLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFED 447

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV----------------------- 454
           M +KG  PD  +F  ++  LC   ++D+A++ +  +V                       
Sbjct: 448 MQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGE 507

Query: 455 -----------MNN--PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYT 501
                      MN   P       ++I++ L + GR  +   +    +      +VV++ 
Sbjct: 508 LVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFN 567

Query: 502 VAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
             + G    G  EEA+ L   M  I + PN Y Y  ++  +CK   I     + +D++  
Sbjct: 568 SLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDML-- 625

Query: 562 RIELDYHTSIRLTKFIF 578
                 H  ++ T  ++
Sbjct: 626 ------HKGVKPTSVLY 636



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 112/562 (19%), Positives = 235/562 (41%), Gaps = 81/562 (14%)

Query: 120 QTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD----LGIK 175
            T+ + +  Y R     + L     + + G  P+ F+ +++   + K G VD    L ++
Sbjct: 177 HTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFV-KDGEVDKAHCLFLE 235

Query: 176 VLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGR 235
           ++++  LP  L  N  +  LCK+ ++   + ++  MV  G  P++  + ++++  CK   
Sbjct: 236 MMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKA 295

Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFR----------------------------- 266
           + +A ++L  M+  GT  +   +  LI G+                              
Sbjct: 296 MDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNS 355

Query: 267 ------RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA--FSFLDMLES 318
                 +  R + A  +++ MV  G  P++++Y++++ G+  A    +A   +  +++ +
Sbjct: 356 FIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLT 415

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF-- 376
           +G AP+    N+LI+  ++ G  D A+ +++ +    ++PD+ TF +++S++C  GR   
Sbjct: 416 KGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDD 475

Query: 377 -----------SLLPK------LVCGLEVEADLVVYNALLS-------------YF---- 402
                       + P       L+ G     +LV    L+S             YF    
Sbjct: 476 ALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSII 535

Query: 403 ---CKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
              CK G   +   + + M+  G  P+  +F  L+ G C    ++EA  +   +      
Sbjct: 536 NNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIE 595

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            N +++  +VD   + GR   A+ +FR  + +      V Y++ + GL +  RT  A  +
Sbjct: 596 PNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKM 655

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK 579
           + +M       + +TY V+L   C+         LL+ +    ++ D  T   +   +FK
Sbjct: 656 FHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFK 715

Query: 580 FHSSSSAVNQLVEMCNLGLIPD 601
                 A      +   GL+P+
Sbjct: 716 VGRRQEAKELFDAISTYGLVPN 737



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 96/442 (21%), Positives = 180/442 (40%), Gaps = 75/442 (16%)

Query: 82  DVQSFDHMI-SVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLE 140
           D+ S+  M+    T        V  I   +   G       F + +  Y R  M    + 
Sbjct: 384 DIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAML 443

Query: 141 AFDEMGRFGFTPNTFARNIVMDVLFKIGR-----------VDLGI--------------- 174
            F++M   G  P+T     V+  L +IGR           VD+G+               
Sbjct: 444 IFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCC 503

Query: 175 ---KVLKETQL-----------PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV 220
              +++K  +L           P    F+  + NLCK   V+  KD++ MMV+ G  PNV
Sbjct: 504 NHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNV 563

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
             F  L+  +C +G + EA+ LL  M ++G   +   +  L+DG+ +  R+D A  ++  
Sbjct: 564 VTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRD 623

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS-FLDMLESEGHAPDLVFHNVLIDCLSKMG 339
           M+  G  P  V Y+ ++ G  +A+  + A   F +M+ES G    +  + V++  L +  
Sbjct: 624 MLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIES-GTTVSIHTYGVVLGGLCRNN 682

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALL 399
             D+A                                ++L + +  + V+ D++ +N ++
Sbjct: 683 CTDEA--------------------------------NMLLEKLFAMNVKFDIITFNIVI 710

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
           S   K G   +A +L++ +   G  P+  ++  ++  L      +EA N++  +  +  A
Sbjct: 711 SAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHA 770

Query: 460 VNAHVHTAIVDRLIEAGRCHKA 481
            ++ +   IV  L+      KA
Sbjct: 771 SDSRLLNHIVRMLLNKAEVAKA 792


>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 616

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 108/474 (22%), Positives = 209/474 (44%), Gaps = 17/474 (3%)

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           ++ E+   GC        + L    RG  +   + A   +   G T ++   N+V+  + 
Sbjct: 130 VLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAIC 189

Query: 166 KIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVR-------- 213
           + G VD G+++L++       P+ +S+N  L  LC      +V++++  MVR        
Sbjct: 190 EQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQM 249

Query: 214 --KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
              G  P++RM+  +++  CK G    A  +L  M + G   +V  +  ++ G     R 
Sbjct: 250 PEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERW 309

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           + A  L  +M Q  C  + VT+  L+  F +  +       L+ +   G  PD++ +  +
Sbjct: 310 EEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTV 369

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEAD 391
           I+   K G  D+A+ +   +      P++ ++  +L  +C + R+    +L+  +  +  
Sbjct: 370 INGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGC 429

Query: 392 L---VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
           L   V +N L+++ CK G   QA++L   ML  G +PD  S+  ++ GL  A K +EA+ 
Sbjct: 430 LPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALE 489

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           +   ++      N  +++++   L   GR  K IQ+F          D   Y   I  L 
Sbjct: 490 LLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLC 549

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
           +   T+ A   ++ M      PN  TY +++     E  ++  + LL ++   R
Sbjct: 550 KRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSRR 603



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 93/382 (24%), Positives = 180/382 (47%), Gaps = 18/382 (4%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARV----------GCVIKAQTFLLFLRIYWR 131
           D+ S++ ++  +  +  R++ V  ++ E+ RV          GC    + +   +    +
Sbjct: 212 DIVSYNAVLKGLC-MAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICK 270

Query: 132 GEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR----VDLGIKVLKETQLPNFLS 187
              + +  +    M  +G  PN    N V+  L    R     DL  ++ +E    + ++
Sbjct: 271 DGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVT 330

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           FNI +   C+   V  V +++  M+  G  P+V  +  ++N FCK G + EA  LL  M 
Sbjct: 331 FNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMS 390

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
             G   +  ++T+++ G  R  R   A  L   M+Q GC PN VT+ +LI    +  +  
Sbjct: 391 ACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAE 450

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A   L  +   G +PDL+ ++ +ID L K G  ++AL++ + ++   + P++  + S+ 
Sbjct: 451 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMA 510

Query: 368 STVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
           S +   GR   + ++   ++   V +D  +YNA++S  CK    ++A+  +  M+  G  
Sbjct: 511 SALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCM 570

Query: 425 PDNYSFVGLLRGLCGARKIDEA 446
           P+  ++  L+RGL     + EA
Sbjct: 571 PNESTYTILIRGLASEGLVREA 592



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/468 (21%), Positives = 194/468 (41%), Gaps = 48/468 (10%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           PN  ++   + +LC    +++   V+  M  +G      M  ++L   C+ G    A + 
Sbjct: 106 PNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRA 165

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           L ++   G +L      +++        +D    L  K+   GC P++V+Y +++KG   
Sbjct: 166 LQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCM 225

Query: 303 AKMFSIAFSF----------LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
           AK +                L  +   G  PDL  +  +ID + K G ++ A D+   + 
Sbjct: 226 AKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMP 285

Query: 353 ELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPN 409
              L P+   + ++L  +C + R+     L+  +   +   D V +N L+ +FC+ G  +
Sbjct: 286 SYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVD 345

Query: 410 QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
           + ++L   ML+ G  PD  ++  ++ G C    +DEA+ + + +       N   +T ++
Sbjct: 346 RVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVL 405

Query: 470 DRLIEAGR------------------------------CHK-----AIQLFRRAIVEKYP 494
             L  A R                              C K     AI+L ++ +V    
Sbjct: 406 KGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCS 465

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
            D++SY+  I GL + G+TEEA  L + M +  + PN   Y  M  +  +E     + ++
Sbjct: 466 PDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQM 525

Query: 555 LQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
              + DA +  D      +   + K   +  A++    M + G +P+E
Sbjct: 526 FDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNE 573



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/195 (18%), Positives = 83/195 (42%), Gaps = 3/195 (1%)

Query: 365 SLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
           +L+ ++C +GR +   + +      A +V YNA+++ +C+AG   Q              
Sbjct: 49  ALIRSLCAAGRTADAARALDTAGDAAGVVAYNAMIAGYCRAG---QVAAARRLAAAVPVP 105

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           P+ Y++  ++R LC    I +A+ V   + +   A    +   I++     G    A++ 
Sbjct: 106 PNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRA 165

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
            +    +   LD  +  + +  + E G  +E   L  ++      P+  +Y  +L   C 
Sbjct: 166 LQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCM 225

Query: 545 ERNIKMVKRLLQDVI 559
            +    V+ L+ +++
Sbjct: 226 AKRWDDVEELMVEMV 240


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 120/514 (23%), Positives = 222/514 (43%), Gaps = 30/514 (5%)

Query: 51  HIVHSTLLNCPSDLIALSFFI-WCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGE 109
           HI+     +CP D+++ S  I    K+ D      +++ M+    R++    T   I+  
Sbjct: 75  HIMADDGGDCPPDVVSYSTVINGFFKEGDLDKTYSTYNEMLD--QRISPNVVTYNSIIAA 132

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEM-----YGMVLEAF-------------DEMGRFGFT 151
           L +   V KA   L  +     G M     Y  ++  F              +M   G  
Sbjct: 133 LCKAQTVDKAMEVLTTM--VKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVE 190

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDV 207
           P+    N +MD L K GR     K+     K    P   ++   L        +  +  +
Sbjct: 191 PDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGL 250

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
           + +MVR G +PN  +F IL+  + K  ++ EA  +   M   G + +   +  +I    +
Sbjct: 251 LDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCK 310

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
             R++ A   +E+M+  G SP  + Y SLI G      +  A   +  +   G   + +F
Sbjct: 311 SGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIF 370

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL- 386
            N +ID   K G   ++  ++D ++ + + PD  T+ +L+   CL+G+     KL+  + 
Sbjct: 371 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMV 430

Query: 387 --EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
              ++ D V Y+ L++ +CK      A+ L+  M   G +PD  ++  +L+GL   R+  
Sbjct: 431 SVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTA 490

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
            A  +Y GI  +   +    +  I+  L +      A+++F+   +    L+  ++ + I
Sbjct: 491 AAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMI 550

Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
             LL+ GR +EA  L+       + PN +TYR+M
Sbjct: 551 DALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 584



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 103/468 (22%), Positives = 206/468 (44%), Gaps = 7/468 (1%)

Query: 141 AFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLC 196
            ++EM     +PN    N ++  L K   VD  ++VL    K   +P+ +++N  +   C
Sbjct: 110 TYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFC 169

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
                      +  M   G  P+V  +  L++  CK GR  EA ++   M   G    + 
Sbjct: 170 SSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEIT 229

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
            +  L+ G+     L     L + MV+NG  PN   ++ L+  + + +    A      +
Sbjct: 230 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKM 289

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
             +G  P+ V +  +I  L K G  +DA+  ++ +++  L P +  + SL+  +C   ++
Sbjct: 290 RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 349

Query: 377 SLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
               +L+  +    +  + + +N+++   CK G   ++ KL++ M+  G  PD  ++  L
Sbjct: 350 ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTL 409

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           + G C A K+DEA  +   +V      +   ++ +++   +  R   A+ LFR       
Sbjct: 410 IDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGV 469

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
             D+++Y + ++GL +  RT  A  LY  +          TY ++L   CK +      R
Sbjct: 470 SPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALR 529

Query: 554 LLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           + Q++    ++L+  T   +   + K   +  A +  V   + GL+P+
Sbjct: 530 MFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPN 577



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/425 (22%), Positives = 195/425 (45%), Gaps = 8/425 (1%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G    + G++  + R G       F + +  Y + E     +  F +M + G  PN    
Sbjct: 242 GALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTY 301

Query: 158 NIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
             V+ +L K GRV+  +    +++ E   P  + +N  +  LC  N     +++I  M+ 
Sbjct: 302 GAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLD 361

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +G   N   F  +++  CK GR+ E+ +L  LM+ +G    +  ++ LIDG+    ++D 
Sbjct: 362 RGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDE 421

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L   MV  G  P+ VTY++LI G+ +      A      +ES G +PD++ +N+++ 
Sbjct: 422 ATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQ 481

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC---LSGRFSLLPKLVCGLEVEA 390
            L +      A ++Y G+ +     +  T+  +L  +C   L+     + + +C ++++ 
Sbjct: 482 GLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKL 541

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           +   +N ++    K G  ++A  L+      G  P+ +++  +   + G   ++E   ++
Sbjct: 542 EARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLF 601

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
             +  N   V++ +   IV  L++ G   +A         + + L+  + ++ I  LL G
Sbjct: 602 LSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFI-DLLSG 660

Query: 511 GRTEE 515
           G+ +E
Sbjct: 661 GKYQE 665



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/425 (22%), Positives = 192/425 (45%), Gaps = 5/425 (1%)

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG--FYPNVRMFEILLNCFCKMGRIAEA 239
           +P+  S+NI L  LC  N      +++ +M   G    P+V  +  ++N F K G + + 
Sbjct: 48  IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKT 107

Query: 240 YQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG 299
           Y     M+    S +V  +  +I    + + +D A  +   MV++G  P+ +TY S++ G
Sbjct: 108 YSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHG 167

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
           F  +     A  FL  + S+G  PD+V +N L+D L K G   +A  ++D + +  L P+
Sbjct: 168 FCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPE 227

Query: 360 SYTFCSLLSTVCLSG---RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYN 416
             T+ +LL      G       L  L+    +  +  V++ L+  + K     +A+ +++
Sbjct: 228 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFS 287

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
            M  +G  P+  ++  ++  LC + ++++A+  ++ ++    +    V+ +++  L    
Sbjct: 288 KMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCN 347

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
           +  +A +L    +     L+ + +   I    + GR  E+  L+  M  I V P+  TY 
Sbjct: 348 KWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYS 407

Query: 537 VMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNL 596
            ++  +C    +    +LL  ++   ++ D  T   L     K      A+    EM + 
Sbjct: 408 TLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESS 467

Query: 597 GLIPD 601
           G+ PD
Sbjct: 468 GVSPD 472



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 101/206 (49%), Gaps = 6/206 (2%)

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVC-----GLEVEADLVVYN 396
           +DA  V+D LL  + +PD +++  LL+ +C   R     +L+      G +   D+V Y+
Sbjct: 34  EDARHVFDELLR-RGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            +++ F K G  ++    YN MLD+  +P+  ++  ++  LC A+ +D+A+ V   +V +
Sbjct: 93  TVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 152

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
               +   + +IV     +G+  +AI   ++   +    DVV+Y   +  L + GR  EA
Sbjct: 153 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 212

Query: 517 YILYSQMKHIAVPPNAYTYRVMLLSF 542
             ++  M    + P   TY  +L  +
Sbjct: 213 RKIFDSMTKRGLKPEITTYGTLLQGY 238


>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
          Length = 568

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 163/349 (46%), Gaps = 12/349 (3%)

Query: 136 GMVLEAFDEM----GRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-----PNFL 186
           G V  A D M     R G  PN +    V+    K+GRVD  +KV  E        P  +
Sbjct: 199 GRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAV 258

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
            +N  +   C    +         MV +G    V  + +L++     GR  EAY+L+  M
Sbjct: 259 MYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEM 318

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
              G +L V  + +LI+G  +   +  A  ++E M + G    VVTYTSLI    +    
Sbjct: 319 GGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQV 378

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
                  D     G  PDLV +N LI+  S  G+ D A ++   + + ++ PD  T+ +L
Sbjct: 379 QETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTL 438

Query: 367 LSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           +  +CL GR     KL+  +    ++ DLV YN L+S +   G    A+++ N M++KGF
Sbjct: 439 MRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGF 498

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
            P   ++  L++GLC   + D+A N+ + +V N    +   + ++++ L
Sbjct: 499 NPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 547



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 93/409 (22%), Positives = 188/409 (45%), Gaps = 5/409 (1%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDV 201
           F +M R      T   NI++  L   G+    +++L++   PN +++N  +   C    V
Sbjct: 142 FADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPRPNAVTYNTVIAGFCSRGRV 201

Query: 202 SNVKDVI-GMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG-TSLSVNAWT 259
               D++  M  R G  PN   +  +++ +CK+GR+ EA ++   M+T G        + 
Sbjct: 202 QAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYN 261

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
            LI G+    +LD A    ++MV+ G +  V TY  L+         + A+  ++ +  +
Sbjct: 262 ALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK 321

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
           G A D+  +N+LI+   K G+   AL++++ +    +     T+ SL+  +   G+    
Sbjct: 322 GLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQET 381

Query: 380 PKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
            KL        +  DLV+YNAL++    +G  ++A ++   M  K   PD+ ++  L+RG
Sbjct: 382 DKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRG 441

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
           LC   ++DEA  +   +       +   +  ++      G    A+++    + + +   
Sbjct: 442 LCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPT 501

Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
           +++Y   I+GL + G+ ++A  +  +M    + P+  TY  ++     E
Sbjct: 502 LLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 550



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 94/414 (22%), Positives = 177/414 (42%), Gaps = 21/414 (5%)

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           F I+L   C  G+ A A +LL  M       +   +  +I GF    R+  A  +  +M 
Sbjct: 157 FNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMREMR 212

Query: 283 Q-NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH-APDLVFHNVLIDCLSKMGS 340
           +  G +PN  TY ++I G+ +      A    D + ++G   P+ V +N LI      G 
Sbjct: 213 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 272

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV---CGLEVEADLVVYNA 397
            D AL   D ++E  +     T+  L+  + + GR +   +LV    G  +  D+  YN 
Sbjct: 273 LDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNI 332

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
           L++  CK G   +A++++  M  +G      ++  L+  L    ++ E   ++   V   
Sbjct: 333 LINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRG 392

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAY 517
              +  ++ A+++    +G   +A ++      ++   D V+Y   +RGL   GR +EA 
Sbjct: 393 IRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEAR 452

Query: 518 ILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFI 577
            L  +M    + P+  TY  ++  +  + ++K   R+  ++++        T   L + +
Sbjct: 453 KLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGL 512

Query: 578 FKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTPVSLFDGFVPCERRA 631
            K      A N + EM   G+ PD+             T +SL +G    + RA
Sbjct: 513 CKNGQGDDAENMVKEMVENGITPDD------------STYISLIEGLTTEDERA 554



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 124/277 (44%), Gaps = 10/277 (3%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFD---EMGRFGFTPNT 154
           G+ +T       +   G  +   T+ L +   +   M G   EA++   EMG  G   + 
Sbjct: 271 GKLDTALLYRDRMVERGVAMTVATYNLLVHALF---MDGRGTEAYELVEEMGGKGLALDV 327

Query: 155 FARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGM 210
           F  NI+++   K G V   +++ +           +++   +  L K   V     +   
Sbjct: 328 FTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDE 387

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
            VR+G  P++ ++  L+N     G I  A++++G M     +     +  L+ G   L R
Sbjct: 388 AVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGR 447

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           +D A  L ++M + G  P++VTY +LI G+        A    + + ++G  P L+ +N 
Sbjct: 448 VDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNA 507

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
           LI  L K G  DDA ++   ++E  + PD  T+ SL+
Sbjct: 508 LIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 544



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 52/245 (21%), Positives = 103/245 (42%), Gaps = 4/245 (1%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           + GR      +V E+   G  +   T+ + +  + +       LE F+ M R G      
Sbjct: 304 MDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVV 363

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
               ++  L K G+V    K+  E       P+ + +N  + +     ++    +++G M
Sbjct: 364 TYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 423

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
            +K   P+   +  L+   C +GR+ EA +L+  M   G    +  +  LI G+     +
Sbjct: 424 EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDV 483

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
             A  +  +M+  G +P ++TY +LI+G  +      A + +  +   G  PD   +  L
Sbjct: 484 KDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISL 543

Query: 332 IDCLS 336
           I+ L+
Sbjct: 544 IEGLT 548


>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
          Length = 506

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/440 (22%), Positives = 205/440 (46%), Gaps = 27/440 (6%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFL 186
           + + Y  VL    +M   G  PN    NI+++   ++G +        K+LK    P+ +
Sbjct: 80  KSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDII 139

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           + N  +   C    +    +    +V  GF+ +   +  L+N  CK+G    A QLL  +
Sbjct: 140 TLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRV 199

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
                 L+   +  +IDG  + + ++ A  L+ +MV    SP+VVTY++LI+GF      
Sbjct: 200 DGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKL 259

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
             A    + +  E   PD+   N+L+D   K G    A +V D ++   + P+  TF +L
Sbjct: 260 KDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTL 319

Query: 367 LSTVCLSGR-------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
           +   C   +       F+++ K      ++ ++V Y +L+  +C     N+A K++NTM 
Sbjct: 320 VDGFCKDRKMKEGKTVFAMMMK----QGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMS 375

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
            +G T + +S+  ++ G C  +K+D+A+ ++  +   +   +   + +++D L ++G+  
Sbjct: 376 QRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKIS 435

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
            A QL         P ++++Y   +  LL            +++K   + PN +T  +++
Sbjct: 436 YAFQLVNEMHDRGQPPNIITYNSILNALL------------TKLKDQGIQPNMHTDTILI 483

Query: 540 LSFCKERNIKMVKRLLQDVI 559
              C+   ++  +++ +D++
Sbjct: 484 KGLCQSGKLEAARKVFEDLL 503



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/397 (24%), Positives = 180/397 (45%), Gaps = 5/397 (1%)

Query: 168 GRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILL 227
           G V L   +L +        FN  L +L K      V  +   M  +G  PN   F IL+
Sbjct: 51  GAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILI 110

Query: 228 NCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCS 287
           NCFC++G I  A+ +L  ++ +G    +      I GF    ++  A    +K+V  G  
Sbjct: 111 NCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFH 170

Query: 288 PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
            + V+Y +LI G  +      A   L  ++ +    + V +N +ID +SK    +DA D+
Sbjct: 171 LDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDL 230

Query: 348 YDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLVCGLEVEADLVVYNALLSYFC 403
           Y  ++  ++ PD  T+ +L+    + G+      L  K++    ++ D+  +N L+  FC
Sbjct: 231 YSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILE-NIKPDVYTFNILVDGFC 289

Query: 404 KAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAH 463
           K G   +A  + + M+ +   P+  +F  L+ G C  RK+ E   V+  ++      N  
Sbjct: 290 KEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVV 349

Query: 464 VHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM 523
            + +++D      + +KA ++F          +V SY + I G  +  + ++A  L+ +M
Sbjct: 350 TYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEM 409

Query: 524 KHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
            H  + P+  TY  ++   CK   I    +L+ ++ D
Sbjct: 410 HHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHD 446



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 78/328 (23%), Positives = 153/328 (46%), Gaps = 3/328 (0%)

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           L ++M   G +PN VT+  LI  F +  +   AFS L  +   G+ PD++  N  I    
Sbjct: 90  LSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFC 149

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG--RFSL-LPKLVCGLEVEADLV 393
             G    AL+ +D L+ L    D  ++ +L++ +C  G  R +L L + V G  V+ + V
Sbjct: 150 LKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAV 209

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
           +YN ++    K    N A  LY+ M+ K  +PD  ++  L+RG     K+ +AI+++  +
Sbjct: 210 MYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKM 269

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
           ++ N   + +    +VD   + GR  KA  +    +++    +V ++   + G  +  + 
Sbjct: 270 ILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKM 329

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
           +E   +++ M    + PN  TY  ++  +C  + +   K++   +    +  + H+   +
Sbjct: 330 KEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIM 389

Query: 574 TKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
                K      A+   +EM +  +IPD
Sbjct: 390 INGFCKIKKVDKAMKLFIEMHHKHIIPD 417



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 74/310 (23%), Positives = 156/310 (50%), Gaps = 19/310 (6%)

Query: 153 NTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVI 208
           N    N V+D + K   V    DL  +++ +   P+ ++++  +     +  + +  D+ 
Sbjct: 207 NAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLF 266

Query: 209 GMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRL 268
             M+ +   P+V  F IL++ FCK GR+ +A  +L +M+      +V+ +  L+DGF + 
Sbjct: 267 NKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKD 326

Query: 269 RRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH 328
           R++     ++  M++ G  PNVVTY SL+ G+   K  + A    + +   G   ++  +
Sbjct: 327 RKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSY 386

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV 388
           N++I+   K+   D A+ ++  +    ++PD  T+ SL+  +C SG+ S   +LV  +  
Sbjct: 387 NIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHD 446

Query: 389 EA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
                +++ YN++L+             L   + D+G  P+ ++   L++GLC + K++ 
Sbjct: 447 RGQPPNIITYNSILN------------ALLTKLKDQGIQPNMHTDTILIKGLCQSGKLEA 494

Query: 446 AINVYQGIVM 455
           A  V++ +++
Sbjct: 495 ARKVFEDLLV 504



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 64/285 (22%), Positives = 132/285 (46%), Gaps = 32/285 (11%)

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           +D A  L+  ++    +     +  ++   +++K +    S    +E EG  P+ V  N+
Sbjct: 49  VDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNI 108

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA 390
           LI+C  ++G                L+P +               FS+L K++  +  E 
Sbjct: 109 LINCFCQLG----------------LIPFA---------------FSVLAKIL-KMGYEP 136

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           D++  N  +  FC  G  +QA+  ++ ++  GF  D  S+  L+ GLC   +   A+ + 
Sbjct: 137 DIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLL 196

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
           + +      +NA ++  ++D + +    + A  L+   + ++   DVV+Y+  IRG    
Sbjct: 197 RRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIV 256

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
           G+ ++A  L+++M    + P+ YT+ +++  FCKE  +K  K +L
Sbjct: 257 GKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVL 301


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 124/596 (20%), Positives = 243/596 (40%), Gaps = 54/596 (9%)

Query: 101 ETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFG--FTPNTFARN 158
           + V+ ++  +  +GCV  A ++ + L+           L+    M +     +P+    N
Sbjct: 61  DAVKVLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYN 120

Query: 159 IVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
            V+   FK G++    +L  +++++  +P+ ++ N  +  LCK   V N + ++  MV  
Sbjct: 121 TVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDN 180

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           G  PN   +  +++ +  +GR  EA ++   M   G    + +W   +D   +  R   A
Sbjct: 181 GVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEA 240

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             ++  M   G  PN+VTY  L+ G+     F+   SF + ++ +G   + +   +LID 
Sbjct: 241 AEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDA 300

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS-LLPKL--VCGLEVEAD 391
            +K G  D+A+ +   +    L PD +T+ +L+S +C  GR +  + K   + G  V+ +
Sbjct: 301 YAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPN 360

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG------------------- 432
            VVY++L+  FC  G   +A +L   M++ G    N +F                     
Sbjct: 361 TVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIF 420

Query: 433 -----------------LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
                            L+ G C   ++ +A +V   ++      +   +  +V+   ++
Sbjct: 421 DLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKS 480

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
           GR    + LFR    +K     V+Y + + GL   GRT  A  +  +M       +  TY
Sbjct: 481 GRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTY 540

Query: 536 RVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCN 595
            ++L   C+         + Q +    ++ +  T   +   ++       A +    + +
Sbjct: 541 NIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISD 600

Query: 596 LGLIPDE-----MWRKL----GLLSDETMTPVSLFDGFVPCERRAGNANHLLLNGG 642
            GL+P+      M R L     +   + M       G  PC R   +    LL  G
Sbjct: 601 SGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRTLLEKG 656



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 112/473 (23%), Positives = 206/473 (43%), Gaps = 11/473 (2%)

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL--KETQL---PNFLSFNIALC 193
           L  F  + R G   +  A N V+  L    R D  +KVL  + T+L   P+  S+ I L 
Sbjct: 28  LAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKVLLRRMTELGCVPDAFSYAIVLK 87

Query: 194 NLCKLNDVSNVKDVIGMMVRKG--FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
            LC  N      D++ MM ++     P+V  +  +++ F K G+I +A  L   M+  G 
Sbjct: 88  RLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGF 147

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
              V     +I+   + R +D A  L  +MV NG  PN VTYTS+I G+     +  A  
Sbjct: 148 VPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATK 207

Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
               +   G  PD+V  N  +D L K G   +A +++  +      P+  T+  LL    
Sbjct: 208 MFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYA 267

Query: 372 LSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
             G F+ +      + G  + A+ +V+  L+  + K G  ++A+ + + M  +G +PD +
Sbjct: 268 TEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVF 327

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
           ++  L+  LC   ++ +A++ +  ++      N  V+ +++      G   KA +L    
Sbjct: 328 TYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEM 387

Query: 489 IVEKYPL-DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN 547
           +    P  ++  +   +  + + GR  +A+ ++  +K I    +   +  ++  +C    
Sbjct: 388 MNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGE 447

Query: 548 IKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           +     +L  +I A I  D  T   L    FK       +N   EM +  + P
Sbjct: 448 MGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKP 500



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 121/264 (45%), Gaps = 6/264 (2%)

Query: 288 PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
           P + TY  ++ G   A+   +  +F   L   G   D    N ++ CL      DDA+ V
Sbjct: 6   PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65

Query: 348 -YDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE-----ADLVVYNALLSY 401
               + EL  VPD++++  +L  +C   R      L+  +  E      D+V YN ++  
Sbjct: 66  LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVN 461
           F K G   +A  LY+ M+ +GF PD  +   ++  LC AR +D A  + + +V N    N
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPN 185

Query: 462 AHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYS 521
              +T+++      GR  +A ++FR         D+VS+   +  L + GR++EA  ++ 
Sbjct: 186 KVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFY 245

Query: 522 QMKHIAVPPNAYTYRVMLLSFCKE 545
            M      PN  TY ++L  +  E
Sbjct: 246 SMAAKGHRPNIVTYGILLHGYATE 269



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 74/408 (18%), Positives = 155/408 (37%), Gaps = 72/408 (17%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR---- 169
           G V     F + +  Y +  M    +    EM   G +P+ F  + ++  L ++GR    
Sbjct: 286 GIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADA 345

Query: 170 -------VDLGIK------------------VLKETQL-----------PNFLSFNIALC 193
                  +  G++                  ++K  +L           PN   FN  + 
Sbjct: 346 VDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVH 405

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
           ++CK   V +   +  ++   G   ++ MF  L++ +C +G + +A+ +L  MI+ G   
Sbjct: 406 SICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGP 465

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
               +  L++G+ +  R+D    L+ +M      P  VTY  ++ G   A     A   L
Sbjct: 466 DTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKML 525

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
             +   G    L  +N+++  L +    D+A+ ++  L                      
Sbjct: 526 HEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKL---------------------- 563

Query: 374 GRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
                     C + V+ ++   N +++         +A  L++ + D G  P+  ++  +
Sbjct: 564 ----------CTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIM 613

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
           +R L     ++EA N++  +  +  A  + +    +  L+E G   KA
Sbjct: 614 IRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRTLLEKGEIVKA 661


>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
          Length = 808

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 106/464 (22%), Positives = 203/464 (43%), Gaps = 12/464 (2%)

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           ++ ++   G    + T+   +  Y    M+   +  F +M   G  P     N  +  LF
Sbjct: 226 VLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALF 285

Query: 166 KIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLND--VSNVKDVIGMMVRKGFYPN 219
           K GR +    +     L    P+ +S++  L       D  +++V ++  +M+ KG  PN
Sbjct: 286 KHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPN 345

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
             +F IL+N + + G + +A  +   M   G       +  +I    R+ RLD A + + 
Sbjct: 346 KHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFN 405

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL-DMLESEGHAPDLVFHNVLIDCLSKM 338
            MV  G  P+   Y  LI+G         A   + +M+  +   P + + + +I+ L K 
Sbjct: 406 HMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKE 465

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVV 394
           G   +  D+ D +++    P+  TF SL+   CL G     F+LL  +   + +E +  +
Sbjct: 466 GRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMA-SIGIEPNCYI 524

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           Y  L+  +CK G  + A+ ++  ML KG  P +  +  +L GL  AR+   A  ++  ++
Sbjct: 525 YGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMI 584

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
            +   V+ H +  ++  L       +A  L  +        D++++ + I  + + GR +
Sbjct: 585 ESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQ 644

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           EA  L+  +    + PN  TY +M+ +  KE + +    L   V
Sbjct: 645 EAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISV 688



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 100/475 (21%), Positives = 208/475 (43%), Gaps = 56/475 (11%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDV 207
           P     NI++D   ++ R DLG+    ++LK    P+  S+++ +    K  +V     +
Sbjct: 98  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSL-IYGFVKDGEVDKAHCL 156

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
              M+ +G  P + +   ++   CKM  + +A  ++  M+  G +  +  ++++IDG  +
Sbjct: 157 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 216

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
            + +D A  + E+MV+ G  PN +TY SLI G+  + M++ +      + S G  P +  
Sbjct: 217 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 276

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL------STVCLSGRFSLLPK 381
            N  I  L K G  ++A  ++D ++     PD  ++ ++L      +  CL+   ++   
Sbjct: 277 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIF-N 335

Query: 382 LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
           L+    +  +  V+N L++ + + G  ++A+ ++  M +KG  PD  +F  ++  LC   
Sbjct: 336 LMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIG 395

Query: 442 KIDEAINVYQGIV----------------------------------MNN--PAVNAHVH 465
           ++D+A++ +  +V                                  MN   P       
Sbjct: 396 RLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYF 455

Query: 466 TAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKH 525
           ++I++ L + GR  +   +    +      +VV++   + G    G  EEA+ L   M  
Sbjct: 456 SSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMAS 515

Query: 526 IAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKF 580
           I + PN Y Y  ++  +CK   I     + +D++        H  ++ T  ++  
Sbjct: 516 IGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDML--------HKGVKPTSVLYSI 562



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 112/562 (19%), Positives = 235/562 (41%), Gaps = 81/562 (14%)

Query: 120 QTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD----LGIK 175
            T+ + +  Y R     + L     + + G  P+ F+ +++   + K G VD    L ++
Sbjct: 101 HTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFV-KDGEVDKAHCLFLE 159

Query: 176 VLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGR 235
           ++++  LP  L  N  +  LCK+ ++   + ++  MV  G  P++  + ++++  CK   
Sbjct: 160 MMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKA 219

Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFR----------------------------- 266
           + +A ++L  M+  GT  +   +  LI G+                              
Sbjct: 220 MDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNS 279

Query: 267 ------RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA--FSFLDMLES 318
                 +  R + A  +++ MV  G  P++++Y++++ G+  A    +A   +  +++ +
Sbjct: 280 FIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLT 339

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF-- 376
           +G AP+    N+LI+  ++ G  D A+ +++ +    ++PD+ TF +++S++C  GR   
Sbjct: 340 KGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDD 399

Query: 377 -----------SLLPK------LVCGLEVEADLVVYNALLS-------------YF---- 402
                       + P       L+ G     +LV    L+S             YF    
Sbjct: 400 ALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSII 459

Query: 403 ---CKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
              CK G   +   + + M+  G  P+  +F  L+ G C    ++EA  +   +      
Sbjct: 460 NNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIE 519

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            N +++  +VD   + GR   A+ +FR  + +      V Y++ + GL +  RT  A  +
Sbjct: 520 PNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKM 579

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK 579
           + +M       + +TY V+L   C+         LL+ +    ++ D  T   +   +FK
Sbjct: 580 FHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFK 639

Query: 580 FHSSSSAVNQLVEMCNLGLIPD 601
                 A      +   GL+P+
Sbjct: 640 VGRRQEAKELFDAISTYGLVPN 661



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 87/410 (21%), Positives = 177/410 (43%), Gaps = 11/410 (2%)

Query: 82  DVQSFDHMI-SVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLE 140
           D+ S+  M+    T        V  I   +   G       F + +  Y R  M    + 
Sbjct: 308 DIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAML 367

Query: 141 AFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLC 196
            F++M   G  P+T     V+  L +IGR+D  +            P+   +   +   C
Sbjct: 368 IFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCC 427

Query: 197 KLNDVSNVKDVIGMMVRKGFYP-NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
              ++   K++I  M+ K   P  V+ F  ++N  CK GR+AE   ++ +M+  G   +V
Sbjct: 428 NHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNV 487

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS-FLD 314
             +  L++G+  +  ++ A  L + M   G  PN   Y +L+ G+ +      A + F D
Sbjct: 488 VTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRD 547

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC--- 371
           ML  +G  P  V +++++  L +      A  ++  ++E       +T+  +L  +C   
Sbjct: 548 MLH-KGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNN 606

Query: 372 LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
            +   ++L + +  + V+ D++ +N ++S   K G   +A +L++ +   G  P+  ++ 
Sbjct: 607 CTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYS 666

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
            ++  L      +EA N++  +  +  A ++ +   IV  L+      KA
Sbjct: 667 MMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKA 716


>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 766

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/430 (24%), Positives = 207/430 (48%), Gaps = 14/430 (3%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----------PNFLSFNIA 191
           F+E+   G +PN F   I+M+   K G     I ++K T++          P  +++   
Sbjct: 236 FEELKDSGPSPNVFTYTIMMNYYCK-GSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAY 294

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           +  LC+   V     +I  +  +    N   +  +++ FC+ G + EA++LL  M + G 
Sbjct: 295 IHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGI 354

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
           S +  ++++LIDG  +  +++ A  L E+MVQ+   P++VTY+SL  G  ++ +  I+ S
Sbjct: 355 SPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLS 414

Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
               L +EG+  D++ +N LI+          A  +   +     VP+S+TF  L+   C
Sbjct: 415 MFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFC 474

Query: 372 LSGRF-SLLPKLVCGLEVEADLVVY--NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
              R    L      L+V   L ++  N +   F + G   +A+KL N + D G  P++Y
Sbjct: 475 KRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSY 534

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
           ++  +++ LC  +K ++A  V   ++ NN    A  +  ++D   +     KA+ L+ + 
Sbjct: 535 TYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKM 594

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
           +    P  +V+YT+ I       + +EAY L+ +M    + P+   +  ++  FCK  ++
Sbjct: 595 LKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDM 654

Query: 549 KMVKRLLQDV 558
           K    L +++
Sbjct: 655 KSAWALYEEM 664



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/430 (21%), Positives = 179/430 (41%), Gaps = 42/430 (9%)

Query: 153 NTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVI 208
           N++  N V+    + G +    ++L++ +     P   S++I +  LCK   V    D+I
Sbjct: 322 NSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLI 381

Query: 209 GMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRL 268
             MV+    P++  +  L +  CK G    +  +   +   G    V ++  LI+GF   
Sbjct: 382 EEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQ 441

Query: 269 RRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH 328
           R +  A  L  +M  NG  PN  T+  LI GF + +    A     ++   G   ++   
Sbjct: 442 RDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTC 501

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLV- 383
           N++ D  ++ G + +AL + + + +L +VP+SYT+  ++  +C   +    + +LP ++ 
Sbjct: 502 NIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLK 561

Query: 384 -----CGLE----------------------------VEADLVVYNALLSYFCKAGFPNQ 410
                C +                             +   +V Y  L++ F       +
Sbjct: 562 NNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQE 621

Query: 411 AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
           A  L+  M+ KG  PD   F  ++ G C    +  A  +Y+ +     + N   +T ++D
Sbjct: 622 AYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLID 681

Query: 471 RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
              +  R  KA  LF +   +    D ++YT  I G    G ++    ++++MK   V P
Sbjct: 682 GYFKIKRMDKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGVFP 741

Query: 531 NAYTYRVMLL 540
           N   Y  + L
Sbjct: 742 NYTAYATLGL 751



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 83/326 (25%), Positives = 158/326 (48%), Gaps = 14/326 (4%)

Query: 52  IVHSTLLN--CPSDL--IALSFFIWCAKQRDYFHDVQSFDHMIS--VVTRLTGRFETVRG 105
           + +S+L +  C S L  I+LS F     +  Y HDV S++ +I+  V+ R  G   +   
Sbjct: 394 VTYSSLFDGLCKSGLTEISLSMFHNLGAE-GYKHDVISYNTLINGFVLQRDMG---SACK 449

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           +V E+   G V  + TF   +  + + +     LE F  M + G   N F  NI+ D   
Sbjct: 450 LVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFN 509

Query: 166 KIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
           + G     +K++ E Q    +PN  ++NI +  LCK        +V+ +M++   +P   
Sbjct: 510 REGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAI 569

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            +  L++ + K     +A  L   M+ +G   S+  +T+LI+ F    ++  A YL+++M
Sbjct: 570 HYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEM 629

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
           ++ G  P+ + +T +I GF +      A++  + +   G +P++V +  LID   K+   
Sbjct: 630 IKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRM 689

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLL 367
           D A  +++ +    + PD  T+ +L+
Sbjct: 690 DKADFLFNKMKRDNVTPDGLTYTALI 715



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 93/418 (22%), Positives = 184/418 (44%), Gaps = 48/418 (11%)

Query: 225 ILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN 284
           +L+  F +   + +A  +       G  L++ +   L++ F    + +    L+E++  +
Sbjct: 183 VLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLFEELKDS 242

Query: 285 GCSPNVVTYTSLIKGFMEA---KMFSI--AFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
           G SPNV TYT ++  + +    K   I  A   L+ +E  G +P +V +   I  L + G
Sbjct: 243 GPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGLCRAG 302

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALL 399
             + AL         +L+ D       L++ C                       YNA++
Sbjct: 303 CVEFAL---------RLIRDLRIRNQPLNSYC-----------------------YNAVI 330

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
             FC+ G  ++A +L   M   G +P  YS+  L+ GLC   ++++A+++ + +V +N  
Sbjct: 331 HEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVK 390

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            +   ++++ D L ++G    ++ +F     E Y  DV+SY   I G +       A  L
Sbjct: 391 PSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKL 450

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT-SIRLTKFIF 578
             +M+     PN++T+  ++  FCK + +     +   ++   ++L+  T +I   +F  
Sbjct: 451 VHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNR 510

Query: 579 KFHSSSSAVNQLVEMCNLGLIPDEMWRKLGL--LSDETMT-------PVSLFDGFVPC 627
           + H    A+  + E+ +LG++P+     + +  L  E  T       PV L +   PC
Sbjct: 511 EGH-FWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPC 567


>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
          Length = 442

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 108/423 (25%), Positives = 184/423 (43%), Gaps = 37/423 (8%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G+      ++ ++   GC     T+ + L    +G  Y   +E  D M   G TPN    
Sbjct: 21  GQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTY 80

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N++MD +   G VD  +++L+        P+ +++N  L  LC      +  +++  M+R
Sbjct: 81  NVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLR 140

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +   PN   F +++   C+ G + +A QLL  M   G + ++  +  +I+G    R +D 
Sbjct: 141 ENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDG 200

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L  KM   GC P++VTY +L+KG   A  +  A   +D +   G  PD V  N LI 
Sbjct: 201 AMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIG 260

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLV 393
            L + G   DA++V+  + +    P+S T                               
Sbjct: 261 FLCQKGLMVDAIEVFKQMPDKGCTPNSIT------------------------------- 289

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            Y+ ++S   KA   +QA++L+N M  KGF PD   +  L   L     I+EAI   + +
Sbjct: 290 -YSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKL 347

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
             +  + +  ++ AI+  L   G+   AI +    +      D ++Y + I GL   G  
Sbjct: 348 QDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYL 407

Query: 514 EEA 516
            EA
Sbjct: 408 NEA 410



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/437 (22%), Positives = 198/437 (45%), Gaps = 6/437 (1%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           PN  ++N  +  LC+   V +   V+  M+ +G  P+V  + ILL   CK     +A +L
Sbjct: 5   PNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMEL 64

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           + LM   G + +   + VL+DG      +D A  L   +  +GC P+ V Y +++KG   
Sbjct: 65  IDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCS 124

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
           A+ +  A   +  +  E   P+    NV+I  L + G    A+ + + + +     +  T
Sbjct: 125 AERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVT 184

Query: 363 FCSLLSTVC----LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           + ++++ +C    + G   LL K+      + D+V YN LL   C A     A +L + M
Sbjct: 185 YNAIINGLCEQRNVDGAMGLLSKMK-SYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNM 243

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
              G  PDN +F  L+  LC    + +AI V++ +       N+  ++ I+  L +A + 
Sbjct: 244 TQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKL 303

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            +A++LF     + +  D + Y +    L +    EEA     +++   + P+   Y  +
Sbjct: 304 DQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAI 362

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGL 598
           LL  C+    +    ++  ++ +    D  T + L + +      + A   L+++C+  +
Sbjct: 363 LLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDV 422

Query: 599 IPDEMWRKLGLLSDETM 615
           + + + +   LL D+ +
Sbjct: 423 LVNSLIKSEALLLDQNI 439


>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
 gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
          Length = 671

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 124/486 (25%), Positives = 203/486 (41%), Gaps = 49/486 (10%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D +SF  ++ V  R  G+ E V  ++  + R G  +   T  + +R       +  V E 
Sbjct: 180 DERSFRALVVVCCR-EGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEF 238

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           F  M   G  PN       +D L K   V     VL+E       PN  +    +  LCK
Sbjct: 239 FRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCK 298

Query: 198 LNDVSNVKDVIGMMVRKGFY-PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
           +        +   +++   Y PNV  + +++  +C+ G++A A  LL  M+  G   + N
Sbjct: 299 IGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTN 358

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
            +T LI G  +    D A  L  KM Q G  PN+ TY ++I GF +      A+  L M 
Sbjct: 359 TYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMA 418

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
            S+G   D + + +LI    K G    ALD++D ++E    PD   + SL+ST C   + 
Sbjct: 419 TSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQM 478

Query: 377 SLLPK-----LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
               K     L+ GL        Y ++++ +CK G    A++++  M+  G   D+ ++ 
Sbjct: 479 EESQKFFDKCLMIGLLPTKQ--TYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYG 536

Query: 432 GLLRGLCGARKIDEAINVYQGI------------------------------VMNNPAVN 461
            L+ GLC   +++EA  +Y+G+                              V++     
Sbjct: 537 ALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKR 596

Query: 462 AHVHT--AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
             VHT   +V +L   G    A    ++ + E Y +D  +YT  I    E  R    Y L
Sbjct: 597 QQVHTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFINSCYENNR----YAL 652

Query: 520 YSQMKH 525
            S+M  
Sbjct: 653 ASEMSE 658



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 113/481 (23%), Positives = 212/481 (44%), Gaps = 13/481 (2%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR      +V E+   G  +  +T    LR+      +    + FD M R G  P+  + 
Sbjct: 125 GRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSF 184

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALC-----NLCKLNDVSNVKDVIGMMV 212
             ++ V  + G+V+  +  L         S + A C     +LC+     +V +    M+
Sbjct: 185 RALVVVCCREGKVE-EVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRML 243

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
             G  PNV  +   ++  CK   + +A+ +L  M+  G   +V   T LIDG  ++   +
Sbjct: 244 ETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTE 303

Query: 273 MAGYLWEKMVQNGC-SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
            A  L+ K++++    PNV TYT +I G+      + A   L  +  +G  P+   +  L
Sbjct: 304 RAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTL 363

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPK---LVCGLEV 388
           I    K GS+D A ++ + + +   +P+ YT+ +++   C  G+     K   +     +
Sbjct: 364 IGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGL 423

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
           + D + Y  L++  CK G    A+ L++ M++ G  PD  ++  L+   C  R+++E+  
Sbjct: 424 KFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQK 483

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
            +   +M         +T+++    + GR   A+++F R +      D ++Y   I GL 
Sbjct: 484 FFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLC 543

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
           +  R EEA  LY  M    + P   T   +   +C+     +   +L D +D R ++  H
Sbjct: 544 KESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVL-DRLDKRQQV--H 600

Query: 569 T 569
           T
Sbjct: 601 T 601



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 124/529 (23%), Positives = 234/529 (44%), Gaps = 27/529 (5%)

Query: 101 ETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF--ARN 158
           E +RG+V      G + +A   +L +R +       + +E  + + R G    +F  AR 
Sbjct: 112 EVMRGMVAAFGEAGRLPEAADMVLEMRSHG----LPLCVETANWVLRVGLETGSFVYARK 167

Query: 159 IVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYP 218
            V D + + G              P+  SF   +   C+   V  V  ++  M R GF  
Sbjct: 168 -VFDGMTRAG------------VCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSL 214

Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
           +     +++   C+ GR  +  +    M+  GT  +V  +T  IDG  + R +  A ++ 
Sbjct: 215 DNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVL 274

Query: 279 EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS-FLDMLESEGHAPDLVFHNVLIDCLSK 337
           E+MV  G  PNV T+T+LI G  +      AF  FL +++S  + P++  + V+I    +
Sbjct: 275 EEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCR 334

Query: 338 MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVV 394
            G    A  +   ++E  L P++ T+ +L+   C  G F    +L+  ++ E    ++  
Sbjct: 335 EGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYT 394

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           YNA++  FCK G   +A K+      +G   D  ++  L+   C    I  A++++  +V
Sbjct: 395 YNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMV 454

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
            N    +   +T+++    +  +  ++ + F + ++        +YT  I G  + GR+ 
Sbjct: 455 ENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRST 514

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLT 574
            A  ++ +M       ++ TY  ++   CKE  ++  K L + ++D R+     T + LT
Sbjct: 515 LALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLT 574

Query: 575 KFIFKFHSSSSAVNQLVEMCNLGLIP--DEMWRKLGLLSDETMTPVSLF 621
               +   +S AV+ L  +     +   D + RKL  L D  +   SLF
Sbjct: 575 FEYCRREKTSIAVSVLDRLDKRQQVHTVDVVVRKLSALGD--VDAASLF 621


>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 570

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/420 (22%), Positives = 197/420 (46%), Gaps = 8/420 (1%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKV---LKETQLPNFLSFNIALCNLCKLNDVSNVK 205
           G  P+      ++  LF    +D  I+V   L+    P+ +++N  +   C+ N + +  
Sbjct: 87  GHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHGHPDLIAYNAIITGFCRANRIDSAY 146

Query: 206 DVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF 265
            V+  M  KGF P++  + IL+   C  G +  A +    ++      +V  +T+LI+  
Sbjct: 147 QVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEAT 206

Query: 266 RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL 325
                +D A  L ++M++    P++ TY S+I+G         AF  +  + S+G+APD+
Sbjct: 207 LLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDV 266

Query: 326 VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCG 385
           + +N+L+  L   G ++   ++   ++      +  T+  L+S+VC  G+      L+  
Sbjct: 267 ITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKD 326

Query: 386 LE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
           ++   ++ D   Y+ L++  CK G  + A+++ + M+  G  PD  ++  +L  LC  ++
Sbjct: 327 MKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKR 386

Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTV 502
            DEA+++++ +     + NA  + ++   L   G   +A+ +    + +    D ++Y  
Sbjct: 387 ADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNS 446

Query: 503 AIRGLLEGGRTEEAYILY--SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
            I  L   G  +EA  L    +M+     P+  +Y ++LL  CK   +     +L  ++D
Sbjct: 447 LISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVD 506



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 89/399 (22%), Positives = 181/399 (45%), Gaps = 13/399 (3%)

Query: 75  KQRDYFHDVQSFDHMI-SVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGE 133
           K + +  D+ +++ +I S+ +R  G  ++      +L +  C     T+ + +       
Sbjct: 153 KNKGFSPDIVTYNILIGSLCSR--GMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQG 210

Query: 134 MYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFN 189
                ++  DEM      P+ F  N ++  + + G VD   +++         P+ +++N
Sbjct: 211 GIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYN 270

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
           I L  L          +++  MV +G   NV  + +L++  C+ G++ E   LL  M   
Sbjct: 271 ILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKK 330

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           G       +  LI    +  R+D+A  + + M+ +GC P++V Y +++    + K    A
Sbjct: 331 GLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEA 390

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
            S  + L   G +P+   +N +   L   G    AL +   +L+  + PD  T+ SL+S 
Sbjct: 391 LSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISC 450

Query: 370 VCLSGRFSLLPKLVCGLEVEAD-----LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
           +C  G      +L+  +E+E+      +V YN +L   CK    + A+++   M+DKG  
Sbjct: 451 LCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCR 510

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAH 463
           P+  ++  L+ G+     +++A ++   +V N  A++ H
Sbjct: 511 PNETTYTFLIEGIGFGGCLNDARDLATTLV-NMDAISEH 548



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 72/287 (25%), Positives = 126/287 (43%), Gaps = 4/287 (1%)

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
           Y    +V  G  P+VV  T LI G   +K    A   + +LE+ GH PDL+ +N +I   
Sbjct: 78  YFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHGH-PDLIAYNAIITGF 136

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADL 392
            +    D A  V D +      PD  T+  L+ ++C  G      +    L     +  +
Sbjct: 137 CRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTV 196

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
           V Y  L+      G  ++A+KL + ML+    PD +++  ++RG+C    +D A  +   
Sbjct: 197 VTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISS 256

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           I     A +   +  ++  L+  G+     +L    +      +VV+Y+V I  +   G+
Sbjct: 257 ISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGK 316

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
            EE   L   MK   + P+ Y Y  ++ + CKE  + +   +L  +I
Sbjct: 317 VEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMI 363



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 138/303 (45%), Gaps = 4/303 (1%)

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           +A  F+ +  FL  L ++GH PD+V    LI  L    + D A+ V   +LE    PD  
Sbjct: 69  KAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMH-ILENHGHPDLI 127

Query: 362 TFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTM 418
            + ++++  C + R     +++  ++ +    D+V YN L+   C  G  + A++  N +
Sbjct: 128 AYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQL 187

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
           L +   P   ++  L+        IDEA+ +   ++  N   +   + +I+  +   G  
Sbjct: 188 LKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYV 247

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            +A Q+      + Y  DV++Y + +RGLL  G+ E  Y L S M       N  TY V+
Sbjct: 248 DRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVL 307

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGL 598
           + S C++  ++    LL+D+    ++ D +    L   + K      A+  L  M + G 
Sbjct: 308 ISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGC 367

Query: 599 IPD 601
           +PD
Sbjct: 368 VPD 370



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/280 (21%), Positives = 116/280 (41%), Gaps = 7/280 (2%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G++E    ++ ++   GC     T+ + +    R       +    +M + G  P+ +  
Sbjct: 280 GKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCY 339

Query: 158 NIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           + ++  L K GRVDL I+VL     +  +P+ +++N  L  LCK         +   +  
Sbjct: 340 DPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGE 399

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G  PN   +  + +     G    A  ++  M+  G       +  LI    R   +D 
Sbjct: 400 VGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDE 459

Query: 274 AGYLW--EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           A  L    +M  + C P+VV+Y  ++ G  +    S A   L  +  +G  P+   +  L
Sbjct: 460 AIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFL 519

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
           I+ +   G  +DA D+   L+ +  + + ++F  L  T C
Sbjct: 520 IEGIGFGGCLNDARDLATTLVNMDAISE-HSFERLYKTFC 558



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 84/177 (47%), Gaps = 4/177 (2%)

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           LS  CKAG  N+++     +++KG  PD      L+ GL  ++ ID+AI V   I+ N+ 
Sbjct: 64  LSRSCKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMH-ILENHG 122

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
             +   + AI+     A R   A Q+  R   + +  D+V+Y + I  L   G  + A  
Sbjct: 123 HPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALE 182

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD---YHTSIR 572
             +Q+      P   TY +++ +   +  I    +LL ++++  ++ D   Y++ IR
Sbjct: 183 FKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIR 239


>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
          Length = 1603

 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 102/403 (25%), Positives = 182/403 (45%), Gaps = 7/403 (1%)

Query: 147  RFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVS 202
            R     ++F  N ++  L   G V    DL +++  E  +P  +++N  +  L +   V 
Sbjct: 1183 RLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVE 1242

Query: 203  NVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLI 262
              +     M   G  P+V  +  LLN +CK G + EA  L G +   G + +V  + +LI
Sbjct: 1243 AAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILI 1302

Query: 263  DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
            DG+ RL  L+ A  L E+M + GC PNV TYT L+KG +  +  ++A  F D + S+G  
Sbjct: 1303 DGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQ 1362

Query: 323  PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL 382
            PD   +N  I     +G    A ++ + L+   +  D+ T+  L+  +C +G      +L
Sbjct: 1363 PDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKEL 1422

Query: 383  VCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
               +    ++ D + Y  L+   C+ G   +A K++N M+  G  P   +F  ++   C 
Sbjct: 1423 QMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCR 1482

Query: 440  ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
               +  A   ++ ++      N   +  ++  L   GR   A   F   +      +  +
Sbjct: 1483 RGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYT 1542

Query: 500  YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
            YT+ I G  + G  E+A   Y +M    + P+  T++ +L  F
Sbjct: 1543 YTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLKGF 1585



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 113/513 (22%), Positives = 217/513 (42%), Gaps = 22/513 (4%)

Query: 109  ELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIG 168
            E+A  G     +     LR+      +  +    +EM   G  P+    N ++D   K G
Sbjct: 1074 EMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLKEG 1133

Query: 169  RVDLGIKVLKETQ------LPNFLSFNIALCNLCKLNDVSNVKDVI-GMMVRKGFYPNVR 221
            R D    +LKE +      LPN +++N+ +  L +  D+    +++ GM + K    +  
Sbjct: 1134 RKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKK--ASSF 1191

Query: 222  MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
             +  L+      G + + Y L   M   G   +V  +  +I G  +   ++ A   + +M
Sbjct: 1192 TYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEM 1251

Query: 282  VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
               G  P+V+TY SL+ G+ +A     A      L   G AP ++ +N+LID   ++G  
Sbjct: 1252 RAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDL 1311

Query: 342  DDALDVYDGLLELKLVPDSYTFCSLLS------TVCLSGRF--SLLPKLVCGLEVEADLV 393
            ++A  + + + E   +P+  T+  L+       ++ ++  F   +L K   GL+   D  
Sbjct: 1312 EEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSK---GLQ--PDCF 1366

Query: 394  VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
             YN  +      G   +A +L   ++ +G + D  ++  L+ GLC    + +A  +   +
Sbjct: 1367 AYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKM 1426

Query: 454  VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
            V N    +   +T ++    E G   +A ++F   I +      V++TV I      G  
Sbjct: 1427 VSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNL 1486

Query: 514  EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
              AY  + +M    V PN  TY V++ + C+    ++      ++++  +  + +T   L
Sbjct: 1487 YSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLL 1546

Query: 574  TKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRK 606
                 K  +   A+    EM   G+ PD +  K
Sbjct: 1547 IDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHK 1579



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 89/353 (25%), Positives = 149/353 (42%), Gaps = 13/353 (3%)

Query: 97   TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
            +G  E  +    E+  +G +    T+   L  Y +       L  F ++ R G  P    
Sbjct: 1238 SGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLT 1297

Query: 157  RNIVMDVLFKIGRVDLGIKVLKETQ-----LPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
             NI++D   ++G ++   ++LKE       LPN  ++ I +     +  ++  ++    M
Sbjct: 1298 YNILIDGYCRLGDLEEA-RILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEM 1356

Query: 212  VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
            + KG  P+   +   +     +G IA A++L  +++  G S     + +LI G  +   L
Sbjct: 1357 LSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNL 1416

Query: 272  DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
              A  L  KMV NG  P+ +TYT LI    E  +   A    + + S+G  P  V   V+
Sbjct: 1417 KDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVI 1476

Query: 332  IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPK-----LVCGL 386
            I    + G+   A   +  +LE  + P+  T+  L+  +C  GR  L        L  GL
Sbjct: 1477 IHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGL 1536

Query: 387  EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
               A+   Y  L+   CK G    A++ Y  M   G  PD  +   LL+G  G
Sbjct: 1537 V--ANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLKGFDG 1587



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 70/304 (23%), Positives = 134/304 (44%), Gaps = 14/304 (4%)

Query: 307  SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
            ++  S    + S G APD+   N ++  L     +DD   V++ +LEL + P   T+ +L
Sbjct: 1066 TLCLSAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTL 1125

Query: 367  LSTVCLSGRFSLLPKLVCGLEVEA-----DLVVYNALLSYFCKAGFPNQAVKLYNTM-LD 420
            L +    GR   +  L+  +E        + V YN +++   + G   +A +L   M L 
Sbjct: 1126 LDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLS 1185

Query: 421  KGFTPDNYS--FVGLLRGLCGARKIDEAINVY-QGIVMNNPAVNAHVHTAIVDRLIEAGR 477
            K  +   Y+    GLL   C  +  D  + +  +GI+      NA +H  +   L+EA +
Sbjct: 1186 KKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQ 1245

Query: 478  CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
                ++      +   P DV++Y   + G  + G  +EA +L+  ++   + P   TY +
Sbjct: 1246 ----VKFAEMRAMGLLP-DVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNI 1300

Query: 538  MLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLG 597
            ++  +C+  +++  + L +++ +     +  T   L K      S + A     EM + G
Sbjct: 1301 LIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKG 1360

Query: 598  LIPD 601
            L PD
Sbjct: 1361 LQPD 1364


>gi|225450007|ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
           [Vitis vinifera]
          Length = 644

 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 154/308 (50%), Gaps = 4/308 (1%)

Query: 166 KIGRVDLGIKVLKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFE 224
           K+G+ +  + VL+   L PN   FN  +  LC   ++     V   M   G  P+   + 
Sbjct: 303 KVGKSEEAMDVLEVFNLSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYT 362

Query: 225 ILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN 284
            ++  +CK+  I+ A + LG M+  G   SV  +T+LID   +   ++MA YL+++M+  
Sbjct: 363 TMMAGYCKVKDISNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITE 422

Query: 285 GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
           G  P+VV+Y +L+ G+ +      AF  L M+ S G +PDLV +N+LI  L K G  ++A
Sbjct: 423 GLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEA 482

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSY 401
            D+ D L      PD  TF +++      G F    LL   +    +E D+V  +ALL+ 
Sbjct: 483 KDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNG 542

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVN 461
           +C+     +A  L++ MLD G   D   +  L+ G C    ID+A ++   ++ +    N
Sbjct: 543 YCRTRCMAEANVLFHKMLDAGLKADVILYNSLIHGFCSLGNIDDACHLVSMMIEHGIMPN 602

Query: 462 AHVHTAIV 469
              H A+V
Sbjct: 603 NITHHALV 610



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 100/442 (22%), Positives = 189/442 (42%), Gaps = 14/442 (3%)

Query: 206 DVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF 265
           D +  M  +G   N  +  + ++ +C  G I   ++LL  M  LG    V A+T++ID  
Sbjct: 207 DFLKEMKSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSL 266

Query: 266 RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL 325
            ++  L  A  +  KM Q G   + V+ +S++ G+ +      A   +D+LE    +P++
Sbjct: 267 CKMSLLKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEA---MDVLEVFNLSPNI 323

Query: 326 VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC----LSGRFSLLPK 381
              N  I  L   G+   A  V+  + E+ L+PD +++ ++++  C    +S     L K
Sbjct: 324 FVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGK 383

Query: 382 LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
           ++    +   +  Y  L+   CK G    A  L+  M+ +G  PD  S+  L+ G     
Sbjct: 384 ML-KRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKG 442

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYT 501
            + +A  +   +     + +   +  ++  LI+ G  ++A  +        +  DVV++T
Sbjct: 443 HLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFT 502

Query: 502 VAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
             I G    G  EEA++L+  M    + P+  T   +L  +C+ R +     L   ++DA
Sbjct: 503 NIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDA 562

Query: 562 RIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTPVSLF 621
            ++ D      L        +   A + +  M   G++P+ +     +L  E     +  
Sbjct: 563 GLKADVILYNSLIHGFCSLGNIDDACHLVSMMIEHGIMPNNITHHALVLGYEKKCVEN-- 620

Query: 622 DGFVPCERRAGNANHLLLNGGV 643
               P ER A     LLL  G+
Sbjct: 621 ----PVERAAFKLQQLLLKYGI 638



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 75/337 (22%), Positives = 148/337 (43%)

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
           ++ +L+NC+ K      A +L+  M  L     +     L+       +L++A    ++M
Sbjct: 153 VYGMLVNCYVKENMTQVALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKEM 212

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
              G   N    +  I G+         +  L  ++  G  PD+V + ++ID L KM   
Sbjct: 213 KSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLL 272

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSY 401
            +A  +   + ++ +  DS +  S++   C  G+      ++    +  ++ V+N+ +S 
Sbjct: 273 KEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDVLEVFNLSPNIFVFNSFISK 332

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVN 461
            C  G   +A K++  M + G  PD +S+  ++ G C  + I  A+     ++      +
Sbjct: 333 LCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGIRPS 392

Query: 462 AHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYS 521
              +T ++D   + G    A  LF+R I E    DVVSY   + G  + G  ++A+ L S
Sbjct: 393 VATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLS 452

Query: 522 QMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
            M+   V P+  TY +++    K   +   K +L ++
Sbjct: 453 MMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDEL 489



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/233 (23%), Positives = 95/233 (40%), Gaps = 39/233 (16%)

Query: 107 VGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK 166
           +G++ + G      T+ L +    +     M    F  M   G  P+  + N +M+   K
Sbjct: 381 LGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGK 440

Query: 167 IGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
            G +    ++L   +     P+ +++NI +  L K   V+  KD++  + R+GF P+V  
Sbjct: 441 KGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVT 500

Query: 223 F-----------------------------------EILLNCFCKMGRIAEAYQLLGLMI 247
           F                                     LLN +C+   +AEA  L   M+
Sbjct: 501 FTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKML 560

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
             G    V  +  LI GF  L  +D A +L   M+++G  PN +T+ +L+ G+
Sbjct: 561 DAGLKADVILYNSLIHGFCSLGNIDDACHLVSMMIEHGIMPNNITHHALVLGY 613


>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
 gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
          Length = 740

 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 106/464 (22%), Positives = 203/464 (43%), Gaps = 12/464 (2%)

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           ++ ++   G    + T+   +  Y    M+   +  F +M   G  P     N  +  LF
Sbjct: 140 VLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALF 199

Query: 166 KIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLND--VSNVKDVIGMMVRKGFYPN 219
           K GR +    +     L    P+ +S++  L       D  +++V ++  +M+ KG  PN
Sbjct: 200 KHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPN 259

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
             +F IL+N + + G + +A  +   M   G       +  +I    R+ RLD A + + 
Sbjct: 260 KHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFN 319

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL-DMLESEGHAPDLVFHNVLIDCLSKM 338
            MV  G  P+   Y  LI+G         A   + +M+  +   P + + + +I+ L K 
Sbjct: 320 HMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKE 379

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVV 394
           G   +  D+ D +++    P+  TF SL+   CL G     F+LL  +   + +E +  +
Sbjct: 380 GRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMA-SIGIEPNCYI 438

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           Y  L+  +CK G  + A+ ++  ML KG  P +  +  +L GL  AR+   A  ++  ++
Sbjct: 439 YGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMI 498

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
            +   V+ H +  ++  L       +A  L  +        D++++ + I  + + GR +
Sbjct: 499 ESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQ 558

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           EA  L+  +    + PN  TY +M+ +  KE + +    L   V
Sbjct: 559 EAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISV 602



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 113/562 (20%), Positives = 238/562 (42%), Gaps = 81/562 (14%)

Query: 120 QTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD----LGIK 175
            T+ + +  Y R     + L     + + G  P+ F+ +++     K G VD    L ++
Sbjct: 15  HTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYG-FVKDGEVDKAHCLFLE 73

Query: 176 VLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGR 235
           ++++  LP  L  N  +  LCK+ ++   + ++  MV  G  P++  + ++++  CK   
Sbjct: 74  MMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKA 133

Query: 236 IAEAYQLLGLMITLGT---SLSVNA----------WTVLIDGFRRLR------------- 269
           + +A ++L  M+  GT   S++ N+          W   +  F+++              
Sbjct: 134 MDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNS 193

Query: 270 ---------RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA--FSFLDMLES 318
                    R + A  +++ MV  G  P++++Y++++ G+  A    +A   +  +++ +
Sbjct: 194 FIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLT 253

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF-- 376
           +G AP+    N+LI+  ++ G  D A+ +++ +    ++PD+ TF +++S++C  GR   
Sbjct: 254 KGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDD 313

Query: 377 -----------SLLPK------LVCGLEVEADLVVYNALLS-------------YF---- 402
                       + P       L+ G     +LV    L+S             YF    
Sbjct: 314 ALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSII 373

Query: 403 ---CKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
              CK G   +   + + M+  G  P+  +F  L+ G C    ++EA  +   +      
Sbjct: 374 NNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIE 433

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            N +++  +VD   + GR   A+ +FR  + +      V Y++ + GL +  RT  A  +
Sbjct: 434 PNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKM 493

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK 579
           + +M       + +TY V+L   C+         LL+ +    ++ D  T   +   +FK
Sbjct: 494 FHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFK 553

Query: 580 FHSSSSAVNQLVEMCNLGLIPD 601
                 A      +   GL+P+
Sbjct: 554 VGRRQEAKELFDAISTYGLVPN 575



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 98/454 (21%), Positives = 202/454 (44%), Gaps = 48/454 (10%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDV 207
           P     NI++D   ++ R DLG+    ++LK    P+  S+++ +    K  +V     +
Sbjct: 12  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSL-IYGFVKDGEVDKAHCL 70

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
              M+ +G  P + +   ++   CKM  + +A  ++  M+  G +  +  ++++IDG  +
Sbjct: 71  FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 130

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
            + +D A  + E+MV+ G  PN +TY SLI G+  + M++ +      + S G  P +  
Sbjct: 131 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 190

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL------STVCLSGRFSLLPK 381
            N  I  L K G  ++A  ++D ++     PD  ++ ++L      +  CL+   ++   
Sbjct: 191 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIF-N 249

Query: 382 LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
           L+    +  +  V+N L++ + + G  ++A+ ++  M +KG  PD  +F  ++  LC   
Sbjct: 250 LMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIG 309

Query: 442 KIDEAINVYQGIV----------------------------------MNN--PAVNAHVH 465
           ++D+A++ +  +V                                  MN   P       
Sbjct: 310 RLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYF 369

Query: 466 TAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKH 525
           ++I++ L + GR  +   +    +      +VV++   + G    G  EEA+ L   M  
Sbjct: 370 SSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMAS 429

Query: 526 IAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           I + PN Y Y  ++  +CK   I     + +D++
Sbjct: 430 IGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDML 463



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 107/496 (21%), Positives = 201/496 (40%), Gaps = 80/496 (16%)

Query: 82  DVQSFDHMI-SVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLE 140
           D+ S+  M+    T        V  I   +   G       F + +  Y R  M    + 
Sbjct: 222 DIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAML 281

Query: 141 AFDEMGRFGFTPNTFARNIVMDVLFKIGR-----------VDLGI--------------- 174
            F++M   G  P+T     V+  L +IGR           VD+G+               
Sbjct: 282 IFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCC 341

Query: 175 ---KVLKETQL-----------PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV 220
              +++K  +L           P    F+  + NLCK   V+  KD++ MMV+ G  PNV
Sbjct: 342 NHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNV 401

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
             F  L+  +C +G + EA+ LL  M ++G   +   +  L+DG+ +  R+D A  ++  
Sbjct: 402 VTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRD 461

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS-FLDMLESEGHAPDLVFHNVLIDCLSKMG 339
           M+  G  P  V Y+ ++ G  +A+  + A   F +M+ES G    +  + V++  L +  
Sbjct: 462 MLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIES-GTTVSIHTYGVVLGGLCRNN 520

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALL 399
             D+A                                ++L + +  + V+ D++ +N ++
Sbjct: 521 CTDEA--------------------------------NMLLEKLFAMNVKFDIITFNIVI 548

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
           S   K G   +A +L++ +   G  P+  ++  ++  L      +EA N++  +  +  A
Sbjct: 549 SAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHA 608

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL---EGGRTEEA 516
            ++ +   IV  L+      KA      +I+ +  L + + T+++   L   EG   E  
Sbjct: 609 SDSRLLNHIVRMLLNKAEVAKASNYL--SIIGENNLTLEASTISLLASLFSREGKYREHI 666

Query: 517 YILYSQMKHIAVPPNA 532
            +L + M    V   A
Sbjct: 667 KLLPANMTMAVVAATA 682


>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
          Length = 770

 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 103/433 (23%), Positives = 200/433 (46%), Gaps = 17/433 (3%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ-----LPNFLSFNIALCN 194
           +AF E+   G +P+    NI+++ L   G++DL  KV  E +      P+  ++ + +  
Sbjct: 166 DAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKA 225

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           LC+  ++     ++  + R G  P V  + +L++  C+ GR+ EA+QL G M+      S
Sbjct: 226 LCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPS 285

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           +  + +LI+G  R +R      + ++M   G +PN V Y  LI         S A    D
Sbjct: 286 IVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFD 345

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL-- 372
            + S+G    +V +N++   L K G  + A  + D +L   +       CSL ++V    
Sbjct: 346 EMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMT----VHCSLFNSVVAWH 401

Query: 373 ---SGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
              +GR  ++ +L+  +    ++ +  V  A +   CK G   +A +++  +L KG   +
Sbjct: 402 LRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVN 461

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
             +   L+ GLC    + EA  V + +V +    +   +  ++    +A +  +AIQL  
Sbjct: 462 IATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRD 521

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
             I   +  D+ ++   +R     G+ E+   L  QMK   + P+  TY  ++  +CK +
Sbjct: 522 DMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAK 581

Query: 547 NIKMVKRLLQDVI 559
           ++    + L ++I
Sbjct: 582 DVHKANKYLIELI 594



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 123/540 (22%), Positives = 222/540 (41%), Gaps = 68/540 (12%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV ++  MI  + R  G  +    ++ EL R G      T+ + +    R    G V EA
Sbjct: 215 DVYTYTVMIKALCR-AGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRS---GRVEEA 270

Query: 142 FDEMGR------------FGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNF 185
           F   GR            FG   N  AR        + G VD    VL+E +     PN 
Sbjct: 271 FQLKGRMVEGRLRPSIVTFGILINGLARG------QRFGEVD---AVLQEMEGFGITPNE 321

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGL 245
           + +N  +   C+    S    +   MV KG    V  + ++    CK G +  A Q+L  
Sbjct: 322 VIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDE 381

Query: 246 MITLGTSL------SVNAWTVLIDG-----FRRLRRL----------------------- 271
           M+  G ++      SV AW +   G      R +R +                       
Sbjct: 382 MLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRG 441

Query: 272 --DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHN 329
             + A  +W  ++  G   N+ T  +LI G  +      A   L  +   G   D + +N
Sbjct: 442 KHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYN 501

Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE 389
           ++I    K    ++A+ + D +++    PD +TF + L   C  G+   +  L+  ++ E
Sbjct: 502 IMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSE 561

Query: 390 A---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
               D+V Y  ++  +CKA   ++A K    ++  G  P+   +  L+ G      I +A
Sbjct: 562 GLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDA 621

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
           I V   +  N        + +++  +  AG   +A ++F + I++   L V+ YT+ I+G
Sbjct: 622 IGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQG 681

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
             + G+ +EA + + +M +  + PN  TY  ++ ++CK  N +   +L  +++ + I  D
Sbjct: 682 FCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPD 741



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 105/529 (19%), Positives = 213/529 (40%), Gaps = 45/529 (8%)

Query: 60  CPSDLIALSFFIWCAKQRDYFH-DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIK 118
           C +  I  +F +    +R      V +++ ++  + R +GR E    + G +        
Sbjct: 227 CRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCR-SGRVEEAFQLKGRMVEGRLRPS 285

Query: 119 AQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK 178
             TF + +    RG+ +G V     EM  FG TPN    N ++    + G     +++  
Sbjct: 286 IVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFD 345

Query: 179 ETQLPNF----LSFNIALCNLCKLNDVSNVKDVI------GM------------------ 210
           E          +++N+    LCK  ++ + + ++      GM                  
Sbjct: 346 EMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGT 405

Query: 211 ------------MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
                       MV +   PN  +    +   CK G+  EA ++  L++  G  +++   
Sbjct: 406 GRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATS 465

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
             LI G  +   +  A  + + MV +G   + +TY  +I+   +A     A    D +  
Sbjct: 466 NALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIK 525

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL 378
            G  PDL   N  +     +G  +D L + D +    L PD  T+ +++   C +     
Sbjct: 526 RGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHK 585

Query: 379 LPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
             K +  L    +  + V+YNAL+  + + G  + A+ + +TM   G  P   ++  L+ 
Sbjct: 586 ANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMY 645

Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
            +C A  ++EA  ++   ++ N  +    +T I+    + G+  +A+  F+         
Sbjct: 646 WMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRP 705

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
           + ++YT  +    + G  EEA+ L+ +M    + P+  +Y  ++   C+
Sbjct: 706 NKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCE 754


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 108/438 (24%), Positives = 208/438 (47%), Gaps = 22/438 (5%)

Query: 136 GMVLEAFD---EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSF 188
           GM+++A     E    G T +      ++D L K  ++   + ++++       P   ++
Sbjct: 13  GMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATY 72

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           N  L  LCK+  +    D++  +V  G  P+V  +  L++   K  R  EAY+L   M +
Sbjct: 73  NALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMAS 132

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
            G +L    +T LI G  +  ++  A  +++ M   GC P+VVT +++I G  +A     
Sbjct: 133 RGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGA 192

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A      +E+ G AP+ V ++ LI  L K    D AL++   + +    PD+ T+  L+ 
Sbjct: 193 AVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILID 252

Query: 369 TVCLSGR-------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
            +C SG        F  + +  C    + D+  YN L+S FCKAG  + A  +++ M   
Sbjct: 253 GLCKSGDVAAARAFFDEMLEAGC----KPDVYTYNILISGFCKAGNTDAACGVFDDMSSS 308

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
             +P+  ++  L+ GLC  R++ +A   YQ +       ++ V++++VD L ++G+    
Sbjct: 309 RCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGG 368

Query: 482 IQLFRRAIVEKYPL-DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
             LF    +E+  + +  + T  I  L +  R +EA  L++ ++   + P+ Y Y  ++ 
Sbjct: 369 CMLFDE--MERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIIS 425

Query: 541 SFCKERNIKMVKRLLQDV 558
           +  K   +   + + Q++
Sbjct: 426 ALIKSGKVNEGQAVYQEM 443



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/366 (24%), Positives = 167/366 (45%), Gaps = 3/366 (0%)

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           +F+I +  L K   +     +       G   ++  +  +++   K  +I EA  L+  +
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
              G + ++  +  L++G  ++ RL+ A  L  K+V NGC+P+VVTYTSLI G  + K  
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
             A+     + S G A D V +  LI  L + G    A  VY  +     VPD  T  ++
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 367 LSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           +  +C +GR     ++   +E      + VVY+AL+   CKA   + A+++   M     
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
           TPD  ++  L+ GLC +  +  A   +  ++      + + +  ++    +AG    A  
Sbjct: 241 TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACG 300

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           +F      +   +VV+Y   I GL +  +  +A + Y  MK    PP+++ Y  ++   C
Sbjct: 301 VFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLC 360

Query: 544 KERNIK 549
           K   ++
Sbjct: 361 KSGKLE 366



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/350 (24%), Positives = 163/350 (46%), Gaps = 7/350 (2%)

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +++LI+G  +   L  A  L ++   NGC+ ++ TYT+++    + K    A + ++ + 
Sbjct: 2   FSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKIT 61

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-- 375
           + G  P +  +N L++ L KMG  ++A+D+   +++    PD  T+ SL+  +    R  
Sbjct: 62  ANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSF 121

Query: 376 --FSLLPKLVC-GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
             + L  ++   GL +  D V Y AL+    +AG   QA  +Y TM  +G  PD  +   
Sbjct: 122 EAYKLFKEMASRGLAL--DTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLST 179

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           ++ GLC A +I  A+ +++ +     A N  V++A++  L +A +   A+++  +     
Sbjct: 180 MIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAF 239

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVK 552
              D ++Y + I GL + G    A   + +M      P+ YTY +++  FCK  N     
Sbjct: 240 CTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAAC 299

Query: 553 RLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
            +  D+  +R   +  T   L   + K    + A      M   G  PD 
Sbjct: 300 GVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDS 349



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 68/287 (23%), Positives = 126/287 (43%), Gaps = 16/287 (5%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G+      +   +   GCV    T    +    +    G  +  F  M   G  PN    
Sbjct: 153 GKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVY 212

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           + ++  L K  ++D  +++L + +     P+ +++NI +  LCK  DV+  +     M+ 
Sbjct: 213 SALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLE 272

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G  P+V  + IL++ FCK G    A  +   M +   S +V  +  LI G  + R+L  
Sbjct: 273 AGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTK 332

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD-----LVFH 328
           A   ++ M + GC P+   Y+SL+ G  ++          D +E  G A       L+FH
Sbjct: 333 ASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFH 392

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
                 L K    D+A+ +++ + + + +P  Y + S++S +  SG+
Sbjct: 393 ------LCKANRVDEAVSLFNAIRK-EGMPHPYAYNSIISALIKSGK 432


>gi|297847648|ref|XP_002891705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297337547|gb|EFH67964.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 823

 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 124/524 (23%), Positives = 228/524 (43%), Gaps = 46/524 (8%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGEL-ARVGCVIKAQTFLL 124
           A+  + +  +  D   DV + + ++S+V + + R E  R +  E+  R GCV    T ++
Sbjct: 153 AVEIYDYVVELYDSVPDVIACNALLSLVVK-SRRLEDARKVYDEMCERGGCVDNYSTCIM 211

Query: 125 FLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPN 184
              +   G++        D  G+ G  PN    N ++    K+G ++    V KE +L  
Sbjct: 212 VKGMCSEGKVEEGRKLIEDRWGK-GCVPNIVFYNTIIGGYCKLGDIENAKLVFKELKLKG 270

Query: 185 FL----SFNIALCNLCKLND-------VSNVKD------------VIGMMVRKGFY---- 217
           F+    +F   +   CK  D       +  VK+            +I    R GF     
Sbjct: 271 FMPTLETFGTMINGFCKKGDFVASDRLLEEVKERGLRVCVWFLNNIIDAKYRHGFKVDPA 330

Query: 218 ------------PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF 265
                       P++  + IL+N  CK G+   A  LL      G  L+  ++  LI  +
Sbjct: 331 ESIRWIVANDCKPDIATYNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAY 390

Query: 266 RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL 325
            + +  D+A  L  ++ + GC P++VTY  LI G + +     A +    L   G +PD 
Sbjct: 391 CKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDA 450

Query: 326 VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPK---L 382
             +N+L+  L K G +  A  ++  +L+  ++PD+Y + +L+     SG F    K   L
Sbjct: 451 AIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTL 510

Query: 383 VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
                V+ D+V +NA++  FC++G  ++A+   N M ++   PD +++  ++ G    + 
Sbjct: 511 SVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQD 570

Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTV 502
           +  AI +++ +  N    N   +T++++     G    A + F+         +VV+YT 
Sbjct: 571 MATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTT 630

Query: 503 AIRGLLEGGRTEEAYILYSQ-MKHIAVPPNAYTYRVMLLSFCKE 545
            IR   +   T E  + Y + M      PN  T+  +L  F K+
Sbjct: 631 LIRSFAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKK 674



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 115/461 (24%), Positives = 196/461 (42%), Gaps = 14/461 (3%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNL 195
           + +DEM   G   + ++  I++  +   G+V+ G K++++      +PN + +N  +   
Sbjct: 191 KVYDEMCERGGCVDNYSTCIMVKGMCSEGKVEEGRKLIEDRWGKGCVPNIVFYNTIIGGY 250

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
           CKL D+ N K V   +  KGF P +  F  ++N FCK G    + +LL  +   G  + V
Sbjct: 251 CKLGDIENAKLVFKELKLKGFMPTLETFGTMINGFCKKGDFVASDRLLEEVKERGLRVCV 310

Query: 256 NAWTVLIDG-FRRLRRLDMAGYL-WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
                +ID  +R   ++D A  + W  +V N C P++ TY  LI    +     +A   L
Sbjct: 311 WFLNNIIDAKYRHGFKVDPAESIRW--IVANDCKPDIATYNILINRLCKEGKKEVAAGLL 368

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           D    +G     + +  LI    K   YD A  +   L E    PD  T+  L+  + +S
Sbjct: 369 DEASKKGLILTNLSYAPLIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVS 428

Query: 374 GRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           G       +   L    V  D  +YN L+S  CK G    A  L++ MLD+   PD Y +
Sbjct: 429 GHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVY 488

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             L+ G   +   DEA  V+   V     V+   H A++     +G   +A+    R   
Sbjct: 489 ATLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNE 548

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
           E    D  +Y+  I G ++      A  ++  M+     PN  TY  ++  FC + +  +
Sbjct: 549 EHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSL 608

Query: 551 VKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLV 591
            +   +++    +       +  T  I  F   SS + + V
Sbjct: 609 AEETFKEMQSRDL---VPNVVTYTTLIRSFAKESSTLEKAV 646



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 95/477 (19%), Positives = 189/477 (39%), Gaps = 57/477 (11%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D+ +++ +I+ + +  G+ E   G++ E ++ G ++   ++   ++ Y + + Y +  + 
Sbjct: 344 DIATYNILINRLCK-EGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKSKEYDIASKL 402

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDV 201
             ++   G  P+     I++  L   G +D                            D 
Sbjct: 403 LLQLAERGCKPDIVTYGILIHGLVVSGHMD----------------------------DA 434

Query: 202 SNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVL 261
            N+K     ++ +G  P+  ++ +L++  CK GR   A  L   M+          +  L
Sbjct: 435 VNMK---VKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATL 491

Query: 262 IDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH 321
           IDGF R    D A  ++   V+ G   +VV + ++IKGF  + M   A + ++ +  E  
Sbjct: 492 IDGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHL 551

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP- 380
            PD   ++ +ID   K      A+ ++  + + K  P+  T+ SL++  C  G FSL   
Sbjct: 552 VPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEE 611

Query: 381 --KLVCGLEVEADLVVYNALLSYFCKAGFP-NQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
             K +   ++  ++V Y  L+  F K      +AV  +  M+     P+  +F  LL+G 
Sbjct: 612 TFKEMQSRDLVPNVVTYTTLIRSFAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGF 671

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
                    +    G  +  P    H            G+     + F R   + +    
Sbjct: 672 ---------VKKTSGRFLGEPDGFNH------------GQSFLFFEFFHRMKSDGWSDHG 710

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
            +Y   +  L   G  + A +L  +M      P+  ++  +L  FC   N K  + +
Sbjct: 711 AAYNSVLVCLCVHGMVKTACMLQDRMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNM 767



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 95/486 (19%), Positives = 199/486 (40%), Gaps = 46/486 (9%)

Query: 163 VLFKIGRVDLGIKV---LKETQLPNFLSFNIALCNLCKL----NDVSNVKDVIGMMVRKG 215
           V  +I  V++G+K+   L   +   F S   A  +  KL       + ++DV+G +  + 
Sbjct: 70  VFDRIQDVEIGVKLFDWLSSEKKDEFFSNGFACSSFLKLLARHRIFNEIEDVLGNLRNEN 129

Query: 216 FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL-SVNAWTVLIDGFRRLRRLDMA 274
                     +L+ + + G +++A ++   ++ L  S+  V A   L+    + RRL+ A
Sbjct: 130 VKLTHEALSHVLHAYAESGFLSKAVEIYDYVVELYDSVPDVIACNALLSLVVKSRRLEDA 189

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             ++++M + G   +  +   ++KG             ++    +G  P++VF+N +I  
Sbjct: 190 RKVYDEMCERGGCVDNYSTCIMVKGMCSEGKVEEGRKLIEDRWGKGCVPNIVFYNTIIGG 249

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL----------VC 384
             K+G  ++A  V+  L     +P   TF ++++  C  G F    +L          VC
Sbjct: 250 YCKLGDIENAKLVFKELKLKGFMPTLETFGTMINGFCKKGDFVASDRLLEEVKERGLRVC 309

Query: 385 --------------GLEVEA--------------DLVVYNALLSYFCKAGFPNQAVKLYN 416
                         G +V+               D+  YN L++  CK G    A  L +
Sbjct: 310 VWFLNNIIDAKYRHGFKVDPAESIRWIVANDCKPDIATYNILINRLCKEGKKEVAAGLLD 369

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
               KG    N S+  L++  C +++ D A  +   +       +   +  ++  L+ +G
Sbjct: 370 EASKKGLILTNLSYAPLIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSG 429

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
               A+ +  + I      D   Y + + GL + GR   A +L+S+M   ++ P+AY Y 
Sbjct: 430 HMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYA 489

Query: 537 VMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNL 596
            ++  F +  +    +++    ++  +++D      + K   +      A+  +  M   
Sbjct: 490 TLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEE 549

Query: 597 GLIPDE 602
            L+PD+
Sbjct: 550 HLVPDK 555


>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 884

 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 113/483 (23%), Positives = 217/483 (44%), Gaps = 7/483 (1%)

Query: 126 LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQ 181
           +R +   EM    LE    M   G  P++ A +I+  +L ++G      K+L+    +  
Sbjct: 215 MRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLLRGMIRDGP 274

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
            P   +FNI +   C+   +   + ++ +M +    P+V  + IL+N +   GR ++A  
Sbjct: 275 RPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSDALG 334

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
            L LMI  G   S+  ++ +I  F     +  A  ++E + + G SPNV  Y +L+ G+ 
Sbjct: 335 FLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYF 394

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           +A+    A    + +  +G APD    N+L+    K G   D+ +++       LVPD  
Sbjct: 395 KARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCS 454

Query: 362 TFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
            +   ++ +C +G+     + +  +    +   +V +N++++ + +AGF + A K Y  M
Sbjct: 455 LYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIM 514

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
           L  G  P + +   +L GL    ++ EA ++   ++     VN    T ++D   + G  
Sbjct: 515 LMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDT 574

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
             A  L+          D ++++  I GL + G  EEAY  +S+M      PN + Y  +
Sbjct: 575 AGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSL 634

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGL 598
           +   C    +    +L +++    +  D  T+  +     K     SA +   EM ++G+
Sbjct: 635 IHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGV 694

Query: 599 IPD 601
            PD
Sbjct: 695 TPD 697



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 125/569 (21%), Positives = 224/569 (39%), Gaps = 83/569 (14%)

Query: 70  FIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIY 129
           F+W A    Y  D    + ++         +E++  I+  +  VG    +    +  R+ 
Sbjct: 196 FMW-ANHHKYESDFSILNTLMRGFMNSEMAYESLE-ILSRMREVGVRPSSSAISILFRLL 253

Query: 130 WRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNF 185
            R   YG V +    M R G  P     NI++    + G + +   +L    K    P+ 
Sbjct: 254 LRVGDYGSVWKLLRGMIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDV 313

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGL 245
            ++NI +         S+    + +M++ G  P++  F  ++  FC  G + EA ++   
Sbjct: 314 YAYNILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEG 373

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG------ 299
           +  +G S +V  +  L+ G+ + R +  A  L+E+M   G +P+  T+  L+ G      
Sbjct: 374 IQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGK 433

Query: 300 -------FMEAKMFSI----------------------AFSFLDMLESEGHAPDLVFHNV 330
                  F +  + S+                      A  FL+ +  +G  P +V  N 
Sbjct: 434 EADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNS 493

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLV-CG 385
           +I   S+ G  D+A   Y  +L   LVP S T  S+L  +   GR      LL K++  G
Sbjct: 494 VIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKG 553

Query: 386 LEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
           L V    V +  LL  + K G    A  L+  M  +G  PD  +F   + GL  A  ++E
Sbjct: 554 LPVNK--VAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEE 611

Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
           A   +  +       N  V+ +++  L   G+ H+A++L R    +    D+ +  + I 
Sbjct: 612 AYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIIN 671

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML-------------------------- 539
           G  + GR + A+  +++M HI V P+  TY  ++                          
Sbjct: 672 GFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDP 731

Query: 540 ---------LSFCKERNIKMVKRLLQDVI 559
                      FC  + I     +L ++I
Sbjct: 732 DITTYNIRIQGFCSSQKISRAVTMLDELI 760



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 92/392 (23%), Positives = 171/392 (43%), Gaps = 20/392 (5%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIK----VLKETQLPNFLSFNIALCNL 195
           E F +       P+    ++ +  L   G++D  ++    +L++   P+ ++FN  +   
Sbjct: 439 ELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAY 498

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
            +     N      +M+  G  P+      +L    K GR+ EA  LL  MI  G  ++ 
Sbjct: 499 SRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNK 558

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
            A+TVL+DG+ ++     A  LW +M   G  P+ + +++ I G  +A +   A+     
Sbjct: 559 VAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSE 618

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
           +  +G  P+   +N LI  L   G   +AL +   + +  L+PD +T   +++  C  GR
Sbjct: 619 MSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGR 678

Query: 376 ----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
               F    ++   + V  D V YN L+  +CK      A +  N M   G+ PD  ++ 
Sbjct: 679 MKSAFDAFAEMH-HIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYN 737

Query: 432 GLLRGLCGARKIDEAINVYQ-----GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
             ++G C ++KI  A+ +       G+V N    N  ++    D L       +A+ L  
Sbjct: 738 IRIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNAVCTDML------DRAMVLTA 791

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
           + +   +  +VV+  V +    + G  E+A I
Sbjct: 792 KLLKMAFVPNVVTTNVLLSHFCKQGMPEKALI 823



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 139/290 (47%), Gaps = 10/290 (3%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNV 204
           G   N  A  +++D  FK+G       +  E +     P+ ++F+  +  L K   V   
Sbjct: 553 GLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEA 612

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
            +    M +KGF PN  ++  L++  C  G++ EA +L   M   G    +    ++I+G
Sbjct: 613 YEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIING 672

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
           F +  R+  A   + +M   G +P+ VTY +LI G+ +      A  FL+ + + G  PD
Sbjct: 673 FCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPD 732

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC--LSGRFSLLPKL 382
           +  +N+ I           A+ + D L+ + +VP++ T+ ++++ VC  +  R  +L   
Sbjct: 733 ITTYNIRIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNAVCTDMLDRAMVLTAK 792

Query: 383 VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
           +  +    ++V  N LLS+FCK G P +A+ ++   L+K    D   F+G
Sbjct: 793 LLKMAFVPNVVTTNVLLSHFCKQGMPEKAL-IWGQKLNKLLRAD---FIG 838



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 103/421 (24%), Positives = 185/421 (43%), Gaps = 20/421 (4%)

Query: 238 EAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE---KMVQNGCSPNVVTYT 294
           E+ ++L  M  +G   S +A ++L   FR L R+   G +W+    M+++G  P    + 
Sbjct: 226 ESLEILSRMREVGVRPSSSAISIL---FRLLLRVGDYGSVWKLLRGMIRDGPRPCNHNFN 282

Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
            +I  F +     +A S L ++      PD+  +N+LI+     G   DAL     +++ 
Sbjct: 283 IMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSDALGFLHLMIKN 342

Query: 355 KLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQA 411
              P   TF ++++  C  G      K+  G++   +  ++ +YN L+S + KA    QA
Sbjct: 343 GCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQA 402

Query: 412 VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
             LY  M DKG  PD  +F  L+ G     K  ++  +++   +++   +  ++   V  
Sbjct: 403 NMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAG 462

Query: 472 LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
           L  AG+  +A+Q     + +  P  VV++   I      G  + A+  Y  M    + P+
Sbjct: 463 LCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPS 522

Query: 532 AYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLV 591
           + T   MLL   K+  ++  + LL  +ID  + ++      L    FK   ++ A +   
Sbjct: 523 SSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWY 582

Query: 592 EMCNLGLIPDEM--------WRKLGLLSD--ETMTPVSLFDGFVPCERRAGNANHLLLNG 641
           EM   G+ PD +          K GL+ +  E  + +S   GFVP      +  H L N 
Sbjct: 583 EMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSK-KGFVPNNFVYNSLIHGLCNC 641

Query: 642 G 642
           G
Sbjct: 642 G 642


>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
          Length = 864

 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 106/464 (22%), Positives = 203/464 (43%), Gaps = 12/464 (2%)

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           ++ ++   G    + T+   +  Y    M+   +  F +M   G  P     N  +  LF
Sbjct: 282 VLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALF 341

Query: 166 KIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLND--VSNVKDVIGMMVRKGFYPN 219
           K GR +    +     L    P+ +S++  L       D  +++V ++  +M+ KG  PN
Sbjct: 342 KHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPN 401

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
             +F IL+N + + G + +A  +   M   G       +  +I    R+ RLD A + + 
Sbjct: 402 KHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFN 461

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL-DMLESEGHAPDLVFHNVLIDCLSKM 338
            MV  G  P+   Y  LI+G         A   + +M+  +   P + + + +I+ L K 
Sbjct: 462 HMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKE 521

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVV 394
           G   +  D+ D +++    P+  TF SL+   CL G     F+LL  +   + +E +  +
Sbjct: 522 GRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMA-SIGIEPNCYI 580

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           Y  L+  +CK G  + A+ ++  ML KG  P +  +  +L GL  AR+   A  ++  ++
Sbjct: 581 YGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMI 640

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
            +   V+ H +  ++  L       +A  L  +        D++++ + I  + + GR +
Sbjct: 641 ESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQ 700

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           EA  L+  +    + PN  TY +M+ +  KE + +    L   V
Sbjct: 701 EAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISV 744



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 105/499 (21%), Positives = 217/499 (43%), Gaps = 60/499 (12%)

Query: 132 GEMYGMVLEAFDEMGRFG----FTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLP 183
           G+   + +E F  M R+       P     NI++D   ++ R DLG+    ++LK    P
Sbjct: 130 GDAPALAIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGP 189

Query: 184 NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
           +  S+++ +    K  +V     +   M+ +G  P + +   ++   CKM  + +A  ++
Sbjct: 190 DDFSYSL-IYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIV 248

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
             M+  G +  +  ++++IDG  + + +D A  + E+MV+ G  PN +TY SLI G+  +
Sbjct: 249 QKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSIS 308

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
            M++ +      + S G  P +   N  I  L K G  ++A  ++D ++     PD  ++
Sbjct: 309 GMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISY 368

Query: 364 CSLL------STVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
            ++L      +  CL+   ++   L+    +  +  V+N L++ + + G  ++A+ ++  
Sbjct: 369 STMLHGYATATDSCLADVHNIF-NLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFED 427

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV----------------------- 454
           M +KG  PD  +F  ++  LC   ++D+A++ +  +V                       
Sbjct: 428 MQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGE 487

Query: 455 -----------MNN--PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYT 501
                      MN   P       ++I++ L + GR  +   +    +      +VV++ 
Sbjct: 488 LVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFN 547

Query: 502 VAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
             + G    G  EEA+ L   M  I + PN Y Y  ++  +CK   I     + +D++  
Sbjct: 548 SLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDML-- 605

Query: 562 RIELDYHTSIRLTKFIFKF 580
                 H  ++ T  ++  
Sbjct: 606 ------HKGVKPTSVLYSI 618



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 112/562 (19%), Positives = 235/562 (41%), Gaps = 81/562 (14%)

Query: 120 QTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD----LGIK 175
            T+ + +  Y R     + L     + + G  P+ F+ +++   + K G VD    L ++
Sbjct: 157 HTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFV-KDGEVDKAHCLFLE 215

Query: 176 VLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGR 235
           ++++  LP  L  N  +  LCK+ ++   + ++  MV  G  P++  + ++++  CK   
Sbjct: 216 MMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKA 275

Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFR----------------------------- 266
           + +A ++L  M+  GT  +   +  LI G+                              
Sbjct: 276 MDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNS 335

Query: 267 ------RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA--FSFLDMLES 318
                 +  R + A  +++ MV  G  P++++Y++++ G+  A    +A   +  +++ +
Sbjct: 336 FIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLT 395

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF-- 376
           +G AP+    N+LI+  ++ G  D A+ +++ +    ++PD+ TF +++S++C  GR   
Sbjct: 396 KGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDD 455

Query: 377 -----------SLLPK------LVCGLEVEADLVVYNALLS-------------YF---- 402
                       + P       L+ G     +LV    L+S             YF    
Sbjct: 456 ALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSII 515

Query: 403 ---CKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
              CK G   +   + + M+  G  P+  +F  L+ G C    ++EA  +   +      
Sbjct: 516 NNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIE 575

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            N +++  +VD   + GR   A+ +FR  + +      V Y++ + GL +  RT  A  +
Sbjct: 576 PNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKM 635

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK 579
           + +M       + +TY V+L   C+         LL+ +    ++ D  T   +   +FK
Sbjct: 636 FHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFK 695

Query: 580 FHSSSSAVNQLVEMCNLGLIPD 601
                 A      +   GL+P+
Sbjct: 696 VGRRQEAKELFDAISTYGLVPN 717



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 87/410 (21%), Positives = 177/410 (43%), Gaps = 11/410 (2%)

Query: 82  DVQSFDHMI-SVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLE 140
           D+ S+  M+    T        V  I   +   G       F + +  Y R  M    + 
Sbjct: 364 DIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAML 423

Query: 141 AFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLC 196
            F++M   G  P+T     V+  L +IGR+D  +            P+   +   +   C
Sbjct: 424 IFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCC 483

Query: 197 KLNDVSNVKDVIGMMVRKGFYP-NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
              ++   K++I  M+ K   P  V+ F  ++N  CK GR+AE   ++ +M+  G   +V
Sbjct: 484 NHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNV 543

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS-FLD 314
             +  L++G+  +  ++ A  L + M   G  PN   Y +L+ G+ +      A + F D
Sbjct: 544 VTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRD 603

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC--- 371
           ML  +G  P  V +++++  L +      A  ++  ++E       +T+  +L  +C   
Sbjct: 604 MLH-KGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNN 662

Query: 372 LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
            +   ++L + +  + V+ D++ +N ++S   K G   +A +L++ +   G  P+  ++ 
Sbjct: 663 CTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYS 722

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
            ++  L      +EA N++  +  +  A ++ +   IV  L+      KA
Sbjct: 723 MMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKA 772


>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
          Length = 602

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 109/426 (25%), Positives = 185/426 (43%), Gaps = 37/426 (8%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G+      ++ ++   GC     T+ + L    +G  Y   +E  D M   G TPN    
Sbjct: 181 GQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTY 240

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N++MD +   G VD  +++L+        P+ +++N  L  LC      +  +++  M+R
Sbjct: 241 NVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLR 300

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +   PN   F +++   C+ G + +A QLL  M   G + ++  +  +I+G    R +D 
Sbjct: 301 ENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDG 360

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L  KM   GC P++VTY +L+KG   A  +  A   +D +   G  PD V  N LI 
Sbjct: 361 AMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIG 420

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLV 393
            L + G   DA++V+  + +    P+S T                               
Sbjct: 421 FLCQKGLMVDAIEVFKQMPDKGCTPNSIT------------------------------- 449

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            Y+ ++S   KA   +QA++L+N M  KGF PD   +  L   L     I+EAI   + +
Sbjct: 450 -YSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKL 507

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
             +  + +  ++ AI+  L   G+   AI +    +      D ++Y + I GL   G  
Sbjct: 508 QDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYL 567

Query: 514 EEAYIL 519
            EA  L
Sbjct: 568 NEAREL 573



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 107/476 (22%), Positives = 212/476 (44%), Gaps = 7/476 (1%)

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-PNFLSFNIALCNLCKLNDVSN 203
           +G  G      A   + D   + GR+    +V+    + PN  ++N  +  LC+   V +
Sbjct: 126 VGACGPAATVVAYGALTDGYCRAGRLGDARRVVGGMPVQPNAYTYNPLIHTLCERGQVRD 185

Query: 204 VKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLID 263
              V+  M+ +G  P+V  + ILL   CK     +A +L+ LM   G + +   + VL+D
Sbjct: 186 ALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMD 245

Query: 264 GFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP 323
           G      +D A  L   +  +GC P+ V Y +++KG   A+ +  A   +  +  E   P
Sbjct: 246 GMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPP 305

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC----LSGRFSLL 379
           +    NV+I  L + G    A+ + + + +     +  T+ ++++ +C    + G   LL
Sbjct: 306 NEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLL 365

Query: 380 PKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
            K+      + D+V YN LL   C A     A +L + M   G  PDN +F  L+  LC 
Sbjct: 366 SKMK-SYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQ 424

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
              + +AI V++ +       N+  ++ I+  L +A +  +A++LF     + +  D + 
Sbjct: 425 KGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI- 483

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           Y +    L +    EEA     +++   + P+   Y  +LL  C+    +    ++  ++
Sbjct: 484 YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMV 543

Query: 560 DARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETM 615
            +    D  T + L + +      + A   L+++C+  ++ + + +   LL D+ +
Sbjct: 544 SSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDVLVNSLIKSEALLLDQNI 599



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/404 (22%), Positives = 180/404 (44%), Gaps = 14/404 (3%)

Query: 161 MDVLFKIGRVDLGIKVLKETQLPNFLSF-NIALCNLCKLNDVSNVKDVIGMMVRKGFYPN 219
           +  L   G +D  +++++ +  P   +  N  + +LC+     + + V+G     G    
Sbjct: 78  LSALVHRGDLDAALRLVESSPRPPDAALANRLVRDLCRRGRPDDAERVVGAC---GPAAT 134

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT--VLIDGFRRLRRLDMAGYL 277
           V  +  L + +C+ GR+ +A +++G     G  +  NA+T   LI       ++  A  +
Sbjct: 135 VVAYGALTDGYCRAGRLGDARRVVG-----GMPVQPNAYTYNPLIHTLCERGQVRDALSV 189

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
            + M+  GC+P+VVTY  L++   + + +  A   +D++ +EG  P+ V +NVL+D +  
Sbjct: 190 LDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCG 249

Query: 338 MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE---ADLVV 394
            G  DDAL++   L      P +  + ++L  +C + R+    +LV  +  E    +   
Sbjct: 250 EGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEAT 309

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           +N ++   C+ G   QA++L   M   G T +  ++  ++ GLC  R +D A+ +   + 
Sbjct: 310 FNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMK 369

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
                 +   +  ++  L  A +   A +L           D V++   I  L + G   
Sbjct: 370 SYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMV 429

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           +A  ++ QM      PN+ TY  ++    K   +     L  ++
Sbjct: 430 DAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEM 473



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/326 (23%), Positives = 135/326 (41%), Gaps = 34/326 (10%)

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV------------YDGLLE----- 353
           + L ++ES    PD    N L+  L + G  DDA  V            Y  L +     
Sbjct: 89  AALRLVESSPRPPDAALANRLVRDLCRRGRPDDAERVVGACGPAATVVAYGALTDGYCRA 148

Query: 354 ------------LKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNA 397
                       + + P++YT+  L+ T+C  G+     S+L  ++C      D+V YN 
Sbjct: 149 GRLGDARRVVGGMPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLC-RGCAPDVVTYNI 207

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
           LL   CK     QA++L + M  +G TP+N ++  L+ G+CG   +D+A+ + + +  + 
Sbjct: 208 LLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHG 267

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAY 517
              +   +  ++  L  A R   A +L    + E  P +  ++ V I  L   G  ++A 
Sbjct: 268 CKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAI 327

Query: 518 ILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFI 577
            L  +M       N  TY  ++   C++RN+     LL  +     + D  T   L K +
Sbjct: 328 QLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGL 387

Query: 578 FKFHSSSSAVNQLVEMCNLGLIPDEM 603
                   A   +  M   G +PD +
Sbjct: 388 CSAAQWVDAEELMDNMTQNGCLPDNV 413


>gi|302798519|ref|XP_002981019.1| hypothetical protein SELMODRAFT_114007 [Selaginella moellendorffii]
 gi|300151073|gb|EFJ17720.1| hypothetical protein SELMODRAFT_114007 [Selaginella moellendorffii]
          Length = 448

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 97/384 (25%), Positives = 188/384 (48%), Gaps = 11/384 (2%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNV 204
           G+ P+     +++D   ++ RV    ++ +E +        L++N  L  L    D    
Sbjct: 40  GYDPDVVTCGLLVDKFCEMKRVGEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGG 99

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
                + V  G  P+V  ++ +L+C  K G+  EA +++G MI       +  +T LI  
Sbjct: 100 FKFSDIAVGDGSLPHVLAYKTMLDCLIKTGKTREASEVVGEMIKKSVPDGMT-YTALISV 158

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS-FLDMLESEGHAP 323
             +  R D A  +++ MV+    PNV  YTSL+      +    A+  F++M++  G+ P
Sbjct: 159 LCKHNRADDAMKVFDIMVEKEIVPNVDVYTSLLAAHCRTRKLDGAYRLFVEMIQ-RGYGP 217

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LL 379
               + +L+ CL   G    A D++  +     VPD  T+ SL+   C++GR +    L 
Sbjct: 218 SASTYGLLLRCLCNGGRSYLAYDIHSSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLF 277

Query: 380 PKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
            +++ G + + D  +YN L+   C+A    +A+++   M+DKG  P   ++  L+ G   
Sbjct: 278 KEVLEGEKAQLDAGIYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFK 337

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
           A ++D+A+ +++ +     + N  +++  +D L + G+ ++A + F++++      D V+
Sbjct: 338 ANEVDKALQLFRAMEEKGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVT 397

Query: 500 YTVAIRGLLEGGRTEEAYILYSQM 523
           Y   IRGL    R +EA+ LY +M
Sbjct: 398 YNALIRGLFGANRMDEAHRLYREM 421



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/439 (22%), Positives = 198/439 (45%), Gaps = 11/439 (2%)

Query: 176 VLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGR 235
           +L++  +P+  S+N+ +  L KL+ V   + ++  MV +G+ P+V    +L++ FC+M R
Sbjct: 1   MLEDGVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKR 60

Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
           + E  +L   + + G ++ + A+  ++         D      +  V +G  P+V+ Y +
Sbjct: 61  VGEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKT 120

Query: 296 LIKGFMEAKMFSIAFSFL-DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
           ++   ++      A   + +M++     PD + +  LI  L K    DDA+ V+D ++E 
Sbjct: 121 MLDCLIKTGKTREASEVVGEMIKKS--VPDGMTYTALISVLCKHNRADDAMKVFDIMVEK 178

Query: 355 KLVPDSYTFCSLLSTVC----LSGRFSLLPKLVC-GLEVEADLVVYNALLSYFCKAGFPN 409
           ++VP+   + SLL+  C    L G + L  +++  G    A    Y  LL   C  G   
Sbjct: 179 EIVPNVDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSAS--TYGLLLRCLCNGGRSY 236

Query: 410 QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA-VNAHVHTAI 468
            A  ++++M  +G  PD  ++  L+ G C A +I EA  +++ ++    A ++A ++  +
Sbjct: 237 LAYDIHSSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKAQLDAGIYNVL 296

Query: 469 VDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAV 528
           ++ L  A +  +A+++    + +     + +Y   I G  +    ++A  L+  M+    
Sbjct: 297 IEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRAMEEKGF 356

Query: 529 PPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVN 588
            PN   Y   +   CK   I       Q  ++     D  T   L + +F  +    A  
Sbjct: 357 SPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDEAHR 416

Query: 589 QLVEMCNLGLIPDEMWRKL 607
              EM   G I D   R L
Sbjct: 417 LYREMGERGYIADRSLRTL 435



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 106/432 (24%), Positives = 192/432 (44%), Gaps = 10/432 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D  S++ ++  +T+L+   +  R ++  +   G      T  L +  +   +  G V E 
Sbjct: 9   DRDSYNLLVRGLTKLSS-VDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKRVGEVCEL 67

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIK----VLKETQLPNFLSFNIALCNLCK 197
           F E+   G      A N ++  L   G  D G K     + +  LP+ L++   L  L K
Sbjct: 68  FQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKTMLDCLIK 127

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
                   +V+G M++K   P+   +  L++  CK  R  +A ++  +M+      +V+ 
Sbjct: 128 TGKTREASEVVGEMIKKSV-PDGMTYTALISVLCKHNRADDAMKVFDIMVEKEIVPNVDV 186

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T L+    R R+LD A  L+ +M+Q G  P+  TY  L++         +A+     + 
Sbjct: 187 YTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLAYDIHSSMR 246

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE-LKLVPDSYTFCSLLSTVCLSGRF 376
           S GH PD   +  LI      G   +A  ++  +LE  K   D+  +  L+  +C + + 
Sbjct: 247 SRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKAQLDAGIYNVLIEGLCRASKV 306

Query: 377 SLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
               ++  G+  +     L  YNAL+  F KA   ++A++L+  M +KGF+P+   +   
Sbjct: 307 EEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRAMEEKGFSPNTMIYSTF 366

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           + GLC   KI+EA   +Q  V      +   + A++  L  A R  +A +L+R      Y
Sbjct: 367 IDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDEAHRLYREMGERGY 426

Query: 494 PLDVVSYTVAIR 505
             D    T+A +
Sbjct: 427 IADRSLRTLAFQ 438


>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
 gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
          Length = 368

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 78/316 (24%), Positives = 165/316 (52%), Gaps = 3/316 (0%)

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           M+  G    V+ +T +I+G  ++     A  L++KM + GC P+VVTY+++I    + + 
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
            + A      ++++G +P++  +N LI  L     + +A  + + ++ L ++P+  TF  
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 366 LLSTVCLSGRF---SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
           L++  C  G       + K +  + VE ++V Y++L++ +       +A KL++ M+ KG
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180

Query: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI 482
             PD +S+  L+ G C A++I EA  ++  ++      +   +  ++D L + GR  +A 
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 240

Query: 483 QLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
            LF+  +      D+ +Y++ + G  + G   +A+ L+  M+   + PN   Y +++ + 
Sbjct: 241 DLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAM 300

Query: 543 CKERNIKMVKRLLQDV 558
           CK RN+K  ++L  ++
Sbjct: 301 CKSRNLKEARKLFSEL 316



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/292 (27%), Positives = 145/292 (49%), Gaps = 7/292 (2%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
           F +MG  G  P+    + ++D L K  RV+  + +    +     PN  ++N  +  LC 
Sbjct: 33  FKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCN 92

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            +       ++  M+     PN+  F +L+N FCK G + EA  +L  M  +G   +V  
Sbjct: 93  FSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVT 152

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           ++ L++G+     +  A  L++ M+  GC P+V +Y  LI G+ +AK    A    + + 
Sbjct: 153 YSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMI 212

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
            +G  PD+V +N LID L ++G   +A D++  +L    +PD  T+  LL   C  G  +
Sbjct: 213 HQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLA 272

Query: 378 LLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
              +L   ++   ++ ++V+YN L+   CK+    +A KL++ +  +G  P+
Sbjct: 273 KAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPN 324



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/355 (21%), Positives = 154/355 (43%), Gaps = 32/355 (9%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+  ++   +  LCK+ +      +   M   G  P+V  +  +++  CK  R+ EA  +
Sbjct: 8   PDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDI 67

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
              M   G S ++  +  LI G     R   A  +  +M+     PN+VT++ LI  F +
Sbjct: 68  FSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCK 127

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
                 A   L  +   G  P++V ++ L++  S      +A  ++D ++     PD ++
Sbjct: 128 EGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFS 187

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
                                           YN L++ +CKA    +A +L+N M+ +G
Sbjct: 188 --------------------------------YNILINGYCKAKRIGEAKQLFNEMIHQG 215

Query: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI 482
            TPD  S+  L+ GLC   ++ EA ++++ ++ N    +   ++ ++D   + G   KA 
Sbjct: 216 LTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAF 275

Query: 483 QLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
           +LFR         ++V Y + I  + +    +EA  L+S++    + PN   +++
Sbjct: 276 RLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNMKHWKL 330



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 124/282 (43%), Gaps = 38/282 (13%)

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           MV  G  P+V TYT++I G  +      A      +   G  PD+V ++ +ID L K   
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF---SLLPKLVCGLEVEADLVVYNA 397
            ++ALD++  +    + P+ +T+ SL+  +C   R+   S +   +  L +  ++V ++ 
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
           L++ FCK G   +A  +  TM + G  P+  ++  L                     MN 
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSL---------------------MNG 159

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAY 517
            ++ A V               +A +LF   I +    DV SY + I G  +  R  EA 
Sbjct: 160 YSLQAEVF--------------EARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAK 205

Query: 518 ILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
            L+++M H  + P+  +Y  ++   C+   ++    L ++++
Sbjct: 206 QLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNML 247



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 104/236 (44%), Gaps = 14/236 (5%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA---FDEMGRFGFTPNTF 155
           R+     ++ E+  +  +    TF L + I+ +    G V EA      M   G  PN  
Sbjct: 95  RWREASAMLNEMMSLNIMPNIVTFSLLINIFCKE---GNVFEARGVLKTMTEMGVEPNVV 151

Query: 156 ARNIVMD------VLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIG 209
             + +M+       +F+  R    + + K  + P+  S+NI +   CK   +   K +  
Sbjct: 152 TYSSLMNGYSLQAEVFE-ARKLFDVMITKGCK-PDVFSYNILINGYCKAKRIGEAKQLFN 209

Query: 210 MMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLR 269
            M+ +G  P++  +  L++  C++GR+ EA+ L   M+T G    +  +++L+DGF +  
Sbjct: 210 EMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQG 269

Query: 270 RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL 325
            L  A  L+  M      PN+V Y  LI    +++    A      L  +G  P++
Sbjct: 270 YLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNM 325



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/213 (20%), Positives = 90/213 (42%)

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
           + D+  Y  +++  CK G    A  L+  M + G  PD  ++  ++  LC  R+++EA++
Sbjct: 7   QPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALD 66

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           ++  +     + N   + +++  L    R  +A  +    +      ++V++++ I    
Sbjct: 67  IFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFC 126

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
           + G   EA  +   M  + V PN  TY  ++  +  +  +   ++L   +I    + D  
Sbjct: 127 KEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVF 186

Query: 569 TSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           +   L     K      A     EM + GL PD
Sbjct: 187 SYNILINGYCKAKRIGEAKQLFNEMIHQGLTPD 219



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/164 (25%), Positives = 77/164 (46%), Gaps = 5/164 (3%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV--- 170
           GC     ++ + +  Y + +  G   + F+EM   G TP+  + N ++D L ++GR+   
Sbjct: 180 GCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREA 239

Query: 171 -DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
            DL   +L    LP+  +++I L   CK   ++    +   M      PN+ M+ IL++ 
Sbjct: 240 HDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDA 299

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            CK   + EA +L   +   G   ++  W  L + ++R+  L M
Sbjct: 300 MCKSRNLKEARKLFSELFVQGLQPNMKHWK-LFEIWKRMAALRM 342


>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
          Length = 698

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 118/457 (25%), Positives = 199/457 (43%), Gaps = 9/457 (1%)

Query: 87  DHMISVVTR---LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFD 143
           D+   V+ R   L GR E  RG++      GCV  A  + + +  Y R    G  L    
Sbjct: 81  DYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLG 140

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLN 199
           EM   G  P       ++  L + G +     +L E +     PN   +N  +  LCK  
Sbjct: 141 EMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCR 200

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
             S   D++  MV+  F P+V  F  ++  FC+ G + EA +LL   I  G   +  ++T
Sbjct: 201 SASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYT 260

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
            LI GF       +A  L  +M+  G +P+++T  +LI G + +   + A    + +   
Sbjct: 261 PLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAER 320

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
              PD   +NVLI  L K      A ++ + +LE K+ PD + + +L+     S + S  
Sbjct: 321 QVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDA 380

Query: 380 PKLVCGLEVEA--DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
            K+   +E +A  D+V YN ++  +CK G   +AV   ++M   G  PD +++  L+ G 
Sbjct: 381 RKIFEFMEEKACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGY 440

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
                I  ++ +   ++      N   + +++      G  + A  LF +   E    +V
Sbjct: 441 AKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNV 500

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
           V YTV I  L +  +  +A   +  M     PPN  T
Sbjct: 501 VHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDAT 537



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 113/466 (24%), Positives = 214/466 (45%), Gaps = 28/466 (6%)

Query: 100 FETVRGIVGE-LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRF--------GF 150
           +E  RG+ GE L R G      T ++         + G+ LE   E GR         G 
Sbjct: 62  WERARGLYGEMLVREGGADDYSTCVM---------VRGLCLEGRVEEGRGLIEARWGEGC 112

Query: 151 TPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKD 206
            P     N+++D   + G +  G+ +L E +    +P  +++   +  L +  D++ V+ 
Sbjct: 113 VPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVES 172

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
           ++G M  +G  PNV+++  ++N  CK    ++A  +L  M+    +  V  +  +I GF 
Sbjct: 173 LLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFC 232

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
           R   +  A  L  + ++ G  PN ++YT LI GF       +A   L  +   GH PD++
Sbjct: 233 REGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMI 292

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC----LSGRFSLLPKL 382
               LI  L   G  +DAL V + + E +++PD+  +  L+S +C    LS   +LL ++
Sbjct: 293 TLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEM 352

Query: 383 VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
           +   +V+ D  +Y  L+  F ++   + A K++  M +K   PD  ++  +++G C    
Sbjct: 353 L-EQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKA-CPDIVAYNVMIKGYCKFGM 410

Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTV 502
           + EA+     +       +   +T +VD   + G    +++L    +  +   ++ +Y  
Sbjct: 411 MKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYAS 470

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
            I G    G T  A  L+++M+   + PN   Y V++ S  K+  +
Sbjct: 471 LICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKV 516



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 84/377 (22%), Positives = 163/377 (43%), Gaps = 28/377 (7%)

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
           G   E +V+ G + +  T   +++G             ++    EG  P  VF+NVLID 
Sbjct: 67  GLYGEMLVREGGADDYSTCV-MVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDG 125

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---D 391
             + G     L +   +    ++P   T+ +++  +   G  + +  L+  +       +
Sbjct: 126 YCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPN 185

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
           + +YN +++  CK    +QA  + N M+   F PD  +F  ++ G C    + EA+ + +
Sbjct: 186 VQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLR 245

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
             +      N   +T ++      G    A  L    +   +  D+++    I GL+  G
Sbjct: 246 EAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSG 305

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD---YH 568
           +  +A I+  +M    V P+A  Y V++   CK+R +   K LL+++++ +++ D   Y 
Sbjct: 306 QVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYT 365

Query: 569 TSI----RLTKF-----IFKFHSSSS-----AVNQLVE-MCNLGLIPDEM-----WRKLG 608
           T I    R  K      IF+F    +     A N +++  C  G++ + +      RK G
Sbjct: 366 TLIDGFVRSDKLSDARKIFEFMEEKACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAG 425

Query: 609 LLSDETMTPVSLFDGFV 625
            + DE  T  +L DG+ 
Sbjct: 426 CIPDE-FTYTTLVDGYA 441



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 103/455 (22%), Positives = 185/455 (40%), Gaps = 65/455 (14%)

Query: 48  LAPHI-VHSTLLN----CPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFET 102
           L+P++ +++T++N    C S   A        K R +  DV +F+ MI+   R  G    
Sbjct: 182 LSPNVQIYNTVINALCKCRSASQASDMLNQMVKSR-FNPDVVTFNTMIAGFCR-EGDVRE 239

Query: 103 VRGIVGELARVGCVIKAQTFLLFLRIYW-RGEMYGMVLEAFDEMGRFGFTPNTFARNIVM 161
              ++ E  R G      ++   +  +  RGE         + MGR G TP+      ++
Sbjct: 240 ALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGR-GHTPDMITLGALI 298

Query: 162 DVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK--- 214
             L   G+V+  +    K+ +   +P+   +N+ +  LCK   +S  K+++  M+ +   
Sbjct: 299 HGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQ 358

Query: 215 -----------GFY--------------------PNVRMFEILLNCFCKMGRIAEAYQLL 243
                      GF                     P++  + +++  +CK G + EA   +
Sbjct: 359 PDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKACPDIVAYNVMIKGYCKFGMMKEAVTCM 418

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
             M   G       +T L+DG+ +   +  +  L   M++  C PN+ TY SLI G+   
Sbjct: 419 SSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNI 478

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
                A      ++SEG  P++V + VLI  L K      A   ++ +L     P+  T 
Sbjct: 479 GDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATV 538

Query: 364 CSLLSTV--CLSG-------------RFSLLPKLVCGL---EVEADLVVYNALLSYFCKA 405
             L++ +  C  G               S L  +  GL    ++  +  YNA++   C+ 
Sbjct: 539 HYLVNGLVNCRHGMVNSNRSDTKQAHEKSALLDVFRGLISDGLDPRISAYNAIIFSLCRH 598

Query: 406 GFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
               +A+ L + M +KG  PD  +F+ LL G   A
Sbjct: 599 NMLGKAMDLKDKMSNKGCLPDPITFLSLLYGFSSA 633


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 107/469 (22%), Positives = 195/469 (41%), Gaps = 36/469 (7%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALC 193
             E F  M   G  P     N ++ +  K+ R +    L  ++ +     +  +FNI + 
Sbjct: 170 AFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMIN 229

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
            LCK   +   KD +G M   G  PN+  +  +++ +C  GR+  A  +L  M       
Sbjct: 230 VLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEP 289

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
               +  LI G  +  RL+ A  ++E+MVQ G  P+ V Y +LI GF       +A ++ 
Sbjct: 290 DSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYK 349

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           D +  +G +P +  +N LI  L      D+A  +   + E  + PD+ T           
Sbjct: 350 DEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAIT----------- 398

Query: 374 GRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
                                YN L++ +C+     +A  L++ ML  G  P   ++  L
Sbjct: 399 ---------------------YNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSL 437

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           L  L    ++ EA ++++ I       +  +  A++D          A +L +     K 
Sbjct: 438 LHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKV 497

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
           P D V++   ++G    G+ EEA  L+ +MK   + P+  ++  ++  + +  +IK   R
Sbjct: 498 PPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFR 557

Query: 554 LLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
           +  +++D        T   L + + K      A   L EM + G+ PD+
Sbjct: 558 VRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDD 606



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/447 (22%), Positives = 187/447 (41%), Gaps = 42/447 (9%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
           + EM R     + +  NI+++VL K G++      +   +     PN +++N  +   C 
Sbjct: 209 YAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCS 268

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              V     ++  M R+   P+   +  L++  CK GR+ EA ++   M+  G   S   
Sbjct: 269 SGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVI 328

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  LIDGF     LDMA    ++M++ G SP + TY SLI      +    A   +  ++
Sbjct: 329 YNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQ 388

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
            +G +PD + +N+LI+   +  +   A  ++D +L   + P   T+ SLL  +    R  
Sbjct: 389 EKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMK 448

Query: 378 LLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
               L   +  E    D++++NAL+   C       A +L   M      PD  +F  ++
Sbjct: 449 EADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIM 508

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
           +G C   K++EA  ++                                ++ RR I     
Sbjct: 509 QGHCREGKVEEARELFD-------------------------------EMKRRGIKP--- 534

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
            D +S+   I G    G  ++A+ + ++M      P   TY  ++   CK +   + + L
Sbjct: 535 -DHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEEL 593

Query: 555 LQDVIDARIELDYHTSIRLTKFIFKFH 581
           L++++   +  D  T   L + I K +
Sbjct: 594 LKEMVSKGMTPDDTTYFTLIEGIAKVN 620



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/361 (22%), Positives = 154/361 (42%), Gaps = 9/361 (2%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           +GR E    I+  + R      + T+   +    +        + F+EM + G  P+   
Sbjct: 269 SGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVI 328

Query: 157 RNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N ++D     G +D+      ++LK+   P   ++N  +  L         + +I  + 
Sbjct: 329 YNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQ 388

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
            KG  P+   + IL+N +C+     +A+ L   M+  G   +   +T L+    +  R+ 
Sbjct: 389 EKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMK 448

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A  L++K+   G  P+V+ + +LI G         AF  L  ++     PD V  N ++
Sbjct: 449 EADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIM 508

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEV 388
               + G  ++A +++D +    + PD  +F +L+S     G     F +  +++     
Sbjct: 509 QGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEML-DTGF 567

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
              ++ YNAL+   CK    + A +L   M+ KG TPD+ ++  L+ G+      DE  N
Sbjct: 568 NPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDENKN 627

Query: 449 V 449
            
Sbjct: 628 T 628


>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Glycine max]
          Length = 836

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 182/399 (45%), Gaps = 19/399 (4%)

Query: 171 DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCF 230
           D+ +   K    P   + N+ L +L K N++    +V  +   +G  P+V  F   +N F
Sbjct: 207 DIFVMFSKRGVFPCLKTCNLLLSSLVKANELHKSYEVFDLAC-QGVAPDVFTFTTAINAF 265

Query: 231 CKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNV 290
           CK GR+ +A  L   M  LG   +V  +  +IDG  +  R + A    ++MV++  +P+V
Sbjct: 266 CKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSV 325

Query: 291 VTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDG 350
           VTY  LI G M+ +MF  A   L  + S G AP+ V  N LID   + G   +AL V D 
Sbjct: 326 VTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDE 385

Query: 351 LLELKLVPDSYTFCSLLSTVCLSGRFS-----LLPKLVCGLEVEADLVVYNALLSYFCKA 405
           +    + P+  TF +LL   C S +       L+  L  GL V  D+  Y  +     ++
Sbjct: 386 MAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSY-VIHRLMERS 444

Query: 406 GFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY------QGIVMNNPA 459
           GF + A+K+   +L       +     L+ GLC      EAI ++      +G+  N   
Sbjct: 445 GFVS-ALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVT 503

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            NA +H      L E G   +  ++ ++ + +   LD +SY   I G  + G+ EEA+ L
Sbjct: 504 SNALLHG-----LCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKL 558

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
             +M      P+ YTY  ++        I  V RLL + 
Sbjct: 559 KEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEA 597



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 127/553 (22%), Positives = 228/553 (41%), Gaps = 47/553 (8%)

Query: 80  FHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVL 139
           F +V +++++I  + + +GRFE        + R        T+ + +    + EM+    
Sbjct: 287 FPNVVTYNNVIDGLFK-SGRFEEALRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEAN 345

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNL 195
           E   EM   GF PN    N ++D   + G +   ++V  E  +    PNF++FN  L   
Sbjct: 346 EVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGF 405

Query: 196 CKLNDVSNVKDVI--------------------GMMVRKGFYP-----------NVRMFE 224
           C+ N +   + V+                     +M R GF             N+R+ +
Sbjct: 406 CRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSD 465

Query: 225 ILLN----CFCKMGRIAEAYQL-LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
            LL       CK    +EA +L   L    G + +      L+ G      ++    + +
Sbjct: 466 SLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLK 525

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
           +M++ G   + ++Y +LI G  +      AF   + +  +   PD   +N L+  L+ MG
Sbjct: 526 QMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMG 585

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYN 396
             DD   +     E   VP+ YT+  LL   C + R     K    L+   VE   VVYN
Sbjct: 586 KIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYN 645

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            L++ +C+ G   +A KL + M  +G  P   ++  L+ G+C   ++DEA  +++ +   
Sbjct: 646 ILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNE 705

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
               N   +TA++    + G+      +           + ++YT+ I G  + G  +EA
Sbjct: 706 GLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEA 765

Query: 517 YILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKF 576
             L ++M    + P+  TY  +   +CKER + +    LQ    + I L     I     
Sbjct: 766 RELLNEMIRNGIAPDTVTYNALQKGYCKERELTVT---LQSDHKSNIGLPLEEEITYNTL 822

Query: 577 IFKFHSSSSAVNQ 589
           I K H  ++  N+
Sbjct: 823 IHKLHPHTAISNR 835



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 105/460 (22%), Positives = 195/460 (42%), Gaps = 36/460 (7%)

Query: 107 VGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK 166
           V +LA  G      TF   +  + +G   G  ++ F +M   G  PN    N V+D LFK
Sbjct: 243 VFDLACQGVAPDVFTFTTAINAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFK 302

Query: 167 IGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEIL 226
            GR +  ++                             KD    MVR    P+V  + +L
Sbjct: 303 SGRFEEALRF----------------------------KD---RMVRSKVNPSVVTYGVL 331

Query: 227 LNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGC 286
           ++   K+    EA ++L  M ++G + +   +  LIDG+ R   +  A  + ++M   G 
Sbjct: 332 ISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGM 391

Query: 287 SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALD 346
            PN VT+ +L++GF  +     A   L  + S G + ++   + +I  L +   +  AL 
Sbjct: 392 KPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALK 451

Query: 347 VYDGLLELKLVPDSYTFCSLLSTVCL----SGRFSLLPKLVCGLEVEADLVVYNALLSYF 402
           +   LL   +         L+  +C     S    L  KL     + A+ V  NALL   
Sbjct: 452 IVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGL 511

Query: 403 CKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNA 462
           C+ G   +  ++   ML+KG   D  S+  L+ G C   KI+EA  + + +V      + 
Sbjct: 512 CERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDT 571

Query: 463 HVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQ 522
           + +  ++  L + G+     +L   A    +  +V +Y + + G  +  R E+A   +  
Sbjct: 572 YTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKN 631

Query: 523 MKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
           + +  V  ++  Y +++ ++C+  N+    + L+D + +R
Sbjct: 632 LDYEKVELSSVVYNILIAAYCRIGNVTEAFK-LRDAMKSR 670



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 1/136 (0%)

Query: 468 IVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIA 527
           ++  L++A   HK+ ++F  A     P DV ++T AI    +GGR  +A  L+ +M+ + 
Sbjct: 227 LLSSLVKANELHKSYEVFDLACQGVAP-DVFTFTTAINAFCKGGRVGDAVDLFCKMEGLG 285

Query: 528 VPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAV 587
           V PN  TY  ++    K    +   R    ++ +++     T   L   + K      A 
Sbjct: 286 VFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEAN 345

Query: 588 NQLVEMCNLGLIPDEM 603
             LVEM ++G  P+E+
Sbjct: 346 EVLVEMYSMGFAPNEV 361



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/186 (19%), Positives = 83/186 (44%), Gaps = 14/186 (7%)

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
           V  D+  +   ++ FCK G    AV L+  M   G  P+  ++  ++ GL  + + +EA+
Sbjct: 251 VAPDVFTFTTAINAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEAL 310

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA---IVEKYPLDVVSYTVAI 504
                +V +    +   +  ++  L++       +++F  A   +VE Y +      V  
Sbjct: 311 RFKDRMVRSKVNPSVVTYGVLISGLMK-------LEMFEEANEVLVEMYSMGFAPNEVVF 363

Query: 505 RGLLEG----GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
             L++G    G   EA  +  +M    + PN  T+  +L  FC+   ++  +++L  ++ 
Sbjct: 364 NALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILS 423

Query: 561 ARIELD 566
           + + ++
Sbjct: 424 SGLSVN 429


>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 606

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 122/506 (24%), Positives = 224/506 (44%), Gaps = 38/506 (7%)

Query: 65  IALSFFIWCAKQRDYFHDVQ-SFDHMISVVTRLTGRFETVRGIVGELARVG--------- 114
           + L ++ W  K RD    ++ +F  + S+      R+  +R  +    R G         
Sbjct: 83  LCLRYYTWLVKNRDISVSLELTFKLLHSLAN--AKRYSKIRSFLDGFVRNGSDHQVHSIF 140

Query: 115 ---------CVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
                    CV      +L L  Y     + +  EAF   G +G+  +  +   +M  L 
Sbjct: 141 HAISMCDNVCVNSIIADMLVL-AYANNSRFELGFEAFKRSGYYGYKLSAMSCKPLMVALL 199

Query: 166 KIGRVD----LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
           K  R      L  ++++    PN  +FN+ +  LCK   ++  +DV+  M   G+ PNV 
Sbjct: 200 KQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVV 259

Query: 222 MFEILLNCFCKMGRIAEAYQ---LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
            +  L++ +CK+G   + Y+   +L  M+    S ++  + +LIDGF +   L  +  ++
Sbjct: 260 SYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVF 319

Query: 279 EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
           ++M+     PNV+TY SLI G       + A    D + S G  P+L+ ++ LI+   K 
Sbjct: 320 KEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKN 379

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVY 395
           G   +ALD++D +      P +  +  L+   C  G+      L   +E E    D+  Y
Sbjct: 380 GMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTY 439

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
           N L++  C+ G    A KL++ + +KG  PD  +F  L+ G C   +  +A  + + +  
Sbjct: 440 NCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSK 498

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK---YPLDVVSYTVAIRGLLEGGR 512
                    +  ++    + G    A  +  R  +EK     ++V SY V ++G  + G+
Sbjct: 499 MGLKPRHLTYNIMMKGYCKEGNLKAATNM--RTQMEKERRLRMNVASYNVLLQGYSQKGK 556

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVM 538
            E+A +L ++M    + PN  TY ++
Sbjct: 557 LEDANMLLNEMLEKGLVPNRITYEIV 582



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 107/476 (22%), Positives = 204/476 (42%), Gaps = 68/476 (14%)

Query: 169 RVDLGIKVLKETQLPNF----LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFE 224
           R +LG +  K +    +    +S    +  L K N  ++V+ +   M+R+   PNV  F 
Sbjct: 168 RFELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFN 227

Query: 225 ILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRL---RRLDMAGYLWEKM 281
           +++N  CK G++ +A  ++  M   G S +V ++  LIDG+ +L    ++  A  + ++M
Sbjct: 228 VVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEM 287

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
           V+N  SPN+ T+  LI GF +      +      +  +   P+++ +N LI+ L   G  
Sbjct: 288 VENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKI 347

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNAL 398
           ++A+ + D ++   + P+  T+ SL++  C +G       +   V G        +YN L
Sbjct: 348 NEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNML 407

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           +  +CK G  +    L   M  +G  PD  ++  L+ GLC                    
Sbjct: 408 IDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLC-------------------- 447

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
                            G    A +LF +   +  P D+V++ + + G    G + +A +
Sbjct: 448 ---------------RNGNIEAAKKLFDQLTNKGLP-DLVTFHILMEGYCSRGESRKAAM 491

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLT---- 574
           L  +M  + + P   TY +M+  +CKE N+K    +       R +++    +R+     
Sbjct: 492 LLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNM-------RTQMEKERRLRMNVASY 544

Query: 575 KFIFKFHSSSSAVNQ----LVEMCNLGLIPDEMWRKLGLLSDETMTPVSLFDGFVP 626
             + + +S    +      L EM   GL+P+        ++ E +    +  GFVP
Sbjct: 545 NVLLQGYSQKGKLEDANMLLNEMLEKGLVPNR-------ITYEIVKEEMVDKGFVP 593



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 99/385 (25%), Positives = 167/385 (43%), Gaps = 40/385 (10%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVG---CVIKAQTFLL-FLRIYWR 131
           +R    +V +F+ +I+ + + TG+    R ++ ++   G    V+   T +  + ++   
Sbjct: 216 RRKIQPNVFTFNVVINALCK-TGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGN 274

Query: 132 GEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE----TQLPNFLS 187
           G+MY        EM     +PN    NI++D  +K   +   +KV KE      +PN ++
Sbjct: 275 GKMY-KADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVIT 333

Query: 188 FNI---ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLG 244
           +N     LCN  K+N+   ++D    MV  G  PN+  +  L+N FCK G + EA  +  
Sbjct: 334 YNSLINGLCNGGKINEAIGMRD---KMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFD 390

Query: 245 LMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
            +   GT  +   + +LID + +L ++D    L E+M + G  P+V TY  LI G     
Sbjct: 391 SVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNG 450

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
               A    D L ++G  PDLV  ++L++     G    A  +   + ++ L P   T+ 
Sbjct: 451 NIEAAKKLFDQLTNKG-LPDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYN 509

Query: 365 SLLSTVCLSGRFSLLPKLVCGLEVE----ADLVVYNALLSYFCKAGFPNQAVKLYNTML- 419
            ++   C  G       +   +E E     ++  YN LL  + + G    A  L N ML 
Sbjct: 510 IMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLE 569

Query: 420 ------------------DKGFTPD 426
                             DKGF PD
Sbjct: 570 KGLVPNRITYEIVKEEMVDKGFVPD 594



 Score = 42.4 bits (98), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 60/143 (41%), Gaps = 17/143 (11%)

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAH-------------VHTAIVDRLIEA---- 475
           LL  L  A++  +  +   G V N      H             V++ I D L+ A    
Sbjct: 107 LLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANN 166

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
            R     + F+R+    Y L  +S    +  LL+  R+ +   LY +M    + PN +T+
Sbjct: 167 SRFELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTF 226

Query: 536 RVMLLSFCKERNIKMVKRLLQDV 558
            V++ + CK   +   + +++D+
Sbjct: 227 NVVINALCKTGKMNKARDVMEDM 249


>gi|449455956|ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Cucumis sativus]
 gi|449492939|ref|XP_004159147.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Cucumis sativus]
          Length = 535

 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 117/469 (24%), Positives = 214/469 (45%), Gaps = 14/469 (2%)

Query: 21  TIISFKSIHQISSPKVCATTH---QDFPIILAPHIVHSTLLNCPSDLIALSFFIWCAKQR 77
           +I+  + I  + +P    T     + +P  L P+ + + +    +  +AL  F +  K  
Sbjct: 20  SIVPLRFIFAVETPLQSYTVTPPIKPWPQRLFPNRLVAMIRRQQNLDLALQIFHYAGKYH 79

Query: 78  DYF-HDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYG 136
             F H+  ++  +I  ++R    FE V  ++ EL   G       F+  +R Y       
Sbjct: 80  PAFTHNYDTYHAIIYRLSRARA-FEPVESLLLELQDSGINCSEDLFITVIRSYGLASRPK 138

Query: 137 MVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR---VDLGIKVLKET--QLPNFLSFNIA 191
           M L+ F  +  FG   +  + N +++ L +  R   V L  K  K     +PN  + NI 
Sbjct: 139 MALKTFLRIQTFGVRRSVRSLNTLLNALVQNNRFSSVHLLFKYSKSKFGVVPNVFTCNIL 198

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           +  LCK NDV   + V   M   G  PNV  +  +L  +   G +  A ++ G +   G 
Sbjct: 199 IKALCKKNDVEGARKVFDEMPSMGIVPNVVTYTTILGGYVSRGDMIGAKRVFGELFDHGW 258

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
                 +T+L+DG+ +  R   A  + ++M +NG  PN +TY  +I G+ + +    A +
Sbjct: 259 LPDATTYTILMDGYVKQGRFTDAVKVMDEMEENGVEPNDITYGVIILGYCKERKSGEALN 318

Query: 312 FL-DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
            L DMLE + + P+      +ID L   G   +A  +++ LL+    PD+    +L+  +
Sbjct: 319 LLNDMLEKK-YIPNSALCCKVIDVLCGEGRVKEACKMWEKLLKKNCTPDNAITSTLIHWL 377

Query: 371 CLSGRFSLLPKLVCGLE--VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
           C  G      KL    E    + L+ YN L++  C+ G   +A +L++ ML+KG  P+ +
Sbjct: 378 CKEGNIWEARKLFNEFERGTISSLLTYNTLIAGMCEMGELCEAARLWDDMLEKGCVPNEF 437

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           ++  L++G     K  E I V + ++     +N   +  +V+ L++ G+
Sbjct: 438 TYNMLIKGFLKVGKAKEVIKVVEEMLDKGCLLNESTYLILVEGLLKLGK 486



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 84/364 (23%), Positives = 162/364 (44%), Gaps = 11/364 (3%)

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE-KMVQNGCSPNVVTYTSLIKGFMEAKMF 306
           T G   SV +   L++   +  R      L++    + G  PNV T   LIK   +    
Sbjct: 149 TFGVRRSVRSLNTLLNALVQNNRFSSVHLLFKYSKSKFGVVPNVFTCNILIKALCKKNDV 208

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
             A    D + S G  P++V +  ++      G    A  V+  L +   +PD+ T+  L
Sbjct: 209 EGARKVFDEMPSMGIVPNVVTYTTILGGYVSRGDMIGAKRVFGELFDHGWLPDATTYTIL 268

Query: 367 LSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           +      GRF+   K++  +E   VE + + Y  ++  +CK     +A+ L N ML+K +
Sbjct: 269 MDGYVKQGRFTDAVKVMDEMEENGVEPNDITYGVIILGYCKERKSGEALNLLNDMLEKKY 328

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
            P++     ++  LCG  ++ EA  +++ ++  N   +  + + ++  L + G   +A +
Sbjct: 329 IPNSALCCKVIDVLCGEGRVKEACKMWEKLLKKNCTPDNAITSTLIHWLCKEGNIWEARK 388

Query: 484 LF---RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
           LF    R  +      +++Y   I G+ E G   EA  L+  M      PN +TY +++ 
Sbjct: 389 LFNEFERGTIS----SLLTYNTLIAGMCEMGELCEAARLWDDMLEKGCVPNEFTYNMLIK 444

Query: 541 SFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
            F K    K V +++++++D    L+  T + L + + K       +N L  + + G + 
Sbjct: 445 GFLKVGKAKEVIKVVEEMLDKGCLLNESTYLILVEGLLKLGKREELLNILSMIISSGAVD 504

Query: 601 DEMW 604
            + W
Sbjct: 505 FKAW 508


>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1107

 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 117/464 (25%), Positives = 213/464 (45%), Gaps = 20/464 (4%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           F+EM   G  P+T   N ++D   K+GR+D  +   +E +     P+ +++N  +   CK
Sbjct: 153 FEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCK 212

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              +    +    M   G  PNV  +  L++ FCK G + +A +    M  +G   +   
Sbjct: 213 FGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYT 272

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T LID   ++  L  A  L  +M+Q G   NVVTYT+LI G  +A+    A      ++
Sbjct: 273 YTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMD 332

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL----- 372
           + G  P+L  +N LI    K  + D AL++ + L    + PD   + + +  +C      
Sbjct: 333 TAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIE 392

Query: 373 SGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
           + +  +     CG  ++A+ ++Y  L+  + K+G P + + L + M +        +F  
Sbjct: 393 AAKVVMNEMKECG--IKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCV 450

Query: 433 LLRGLCGARKIDEAINVYQGIVMN-NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
           L+ GLC  + + +A++ +  I  +     NA + TA++D L +  +   A  LF + + +
Sbjct: 451 LIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQK 510

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN--AYTYRVMLLSFCKERNIK 549
               D  +YT  + G  + G   EA  L  +M  I +  +  AYT  V  LS C +  ++
Sbjct: 511 GLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQ--LQ 568

Query: 550 MVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEM 593
             +  L+++I   I    H    L   + K H     +++ VE+
Sbjct: 569 KARSFLEEMIGEGI----HPDEVLCISVLKKHYELGCIDEAVEL 608



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 110/477 (23%), Positives = 213/477 (44%), Gaps = 11/477 (2%)

Query: 136 GMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET----QLPNFLSF 188
           GM+ EA   F +M RF   P T + N ++    K+G+ D   +  K+       P   ++
Sbjct: 74  GMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTY 133

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           NI +  +CK  DV   + +   M  +G  P+   +  +++ F K+GR+ +       M  
Sbjct: 134 NIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD 193

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
           +     V  +  LI+ F +  +L +    + +M  NG  PNVV+Y++L+  F +  M   
Sbjct: 194 MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQ 253

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A  F   +   G  P+   +  LID   K+G+  DA  + + +L++ +  +  T+ +L+ 
Sbjct: 254 AIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALID 313

Query: 369 TVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
            +C + R     +L   ++      +L  YNAL+  F KA   ++A++L N +  +G  P
Sbjct: 314 GLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKP 373

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           D   +   + GLC   KI+ A  V   +       N+ ++T ++D   ++G   + + L 
Sbjct: 374 DLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLL 433

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKH-IAVPPNAYTYRVMLLSFCK 544
                    + VV++ V I GL +     +A   ++++ +   +  NA  +  M+   CK
Sbjct: 434 DEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCK 493

Query: 545 ERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           +  ++    L + ++   +  D      L    FK  +   A+    +M  +G+  D
Sbjct: 494 DNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLD 550



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 120/526 (22%), Positives = 213/526 (40%), Gaps = 51/526 (9%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G  E  RG+  E+   G V    T+   +  + +       +  F+EM      P+    
Sbjct: 144 GDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITY 203

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N +++   K G++ +G++  +E +     PN +S++  +   CK   +         M R
Sbjct: 204 NALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRR 263

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G  PN   +  L++  CK+G +++A++L   M+ +G   +V  +T LIDG     R+  
Sbjct: 264 VGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKE 323

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH----- 328
           A  L+ KM   G  PN+ +Y +LI GF++AK    A   L+ L+  G  PDL+ +     
Sbjct: 324 AEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIW 383

Query: 329 ------------------------------NVLIDCLSKMGSYDDALDVYDGLLELKLVP 358
                                           L+D   K G+  + L + D + EL +  
Sbjct: 384 GLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEV 443

Query: 359 DSYTFCSLLSTVC----LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKL 414
              TFC L+  +C    +S       ++     ++A+  ++ A++   CK      A  L
Sbjct: 444 TVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTL 503

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
           +  M+ KG  PD  ++  L+ G      + EA+ +   +      ++   +T++V  L  
Sbjct: 504 FEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSH 563

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQ-MKHIAVP---- 529
             +  KA       I E    D V     ++   E G  +EA  L S  MKH  +     
Sbjct: 564 CNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLTSDND 623

Query: 530 ---PNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
              PN Y+ + ++ S   E     +  L   ++    +L  H  IR
Sbjct: 624 NALPNIYSDQNLVSSREHEEQETRISNLQPKLLLGIYKLAIHRLIR 669



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/417 (22%), Positives = 172/417 (41%), Gaps = 32/417 (7%)

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
           +P F  F+     L  L  +         M R   +P  R    LL+ F K+G+  +  +
Sbjct: 57  VPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR 116

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
               MI  G   +V  + ++ID   +   ++ A  L+E+M   G  P+ VTY S+I GF 
Sbjct: 117 FFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFG 176

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           +         F + ++     PD++ +N LI+C  K G     L+ Y    E+K      
Sbjct: 177 KVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFY---REMK------ 227

Query: 362 TFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
                                  G  ++ ++V Y+ L+  FCK G   QA+K Y  M   
Sbjct: 228 -----------------------GNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRV 264

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
           G  P+ Y++  L+   C    + +A  +   ++      N   +TA++D L +A R  +A
Sbjct: 265 GLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEA 324

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
            +LF +        ++ SY   I G ++    + A  L +++K   + P+   Y   +  
Sbjct: 325 EELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWG 384

Query: 542 FCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGL 598
            C    I+  K ++ ++ +  I+ +      L    FK  + +  ++ L EM  L +
Sbjct: 385 LCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDI 441



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 85/365 (23%), Positives = 143/365 (39%), Gaps = 49/365 (13%)

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           D+   LW    +N C P    + +L    ++  M   A      ++     P     N L
Sbjct: 44  DVFDVLWS--TRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGL 101

Query: 332 IDCLSKMGSYDDA-------------------------------LDVYDGLLE----LKL 356
           +   +K+G  DD                                ++   GL E      L
Sbjct: 102 LHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGL 161

Query: 357 VPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE------VEADLVVYNALLSYFCKAGFPNQ 410
           VPD+ T+ S++      G+   L   VC  E       E D++ YNAL++ FCK G    
Sbjct: 162 VPDTVTYNSMIDGF---GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI 218

Query: 411 AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
            ++ Y  M   G  P+  S+  L+   C    + +AI  Y  +       N + +T+++D
Sbjct: 219 GLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 278

Query: 471 RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
              + G    A +L    +      +VV+YT  I GL +  R +EA  L+ +M    V P
Sbjct: 279 ANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIP 338

Query: 531 NAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD---YHTSIRLTKFIFKFHSSSSAV 587
           N  +Y  ++  F K +N+     LL ++    I+ D   Y T I     + K  ++   +
Sbjct: 339 NLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVM 398

Query: 588 NQLVE 592
           N++ E
Sbjct: 399 NEMKE 403


>gi|300681579|emb|CBI75523.1| PPR repeat domain containing protein [Triticum aestivum]
          Length = 728

 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 111/526 (21%), Positives = 232/526 (44%), Gaps = 12/526 (2%)

Query: 84  QSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFD 143
           Q +  +I V   L+  FE       E  +VG  ++   FLL   +     MY   L  FD
Sbjct: 144 QVYATVIRVFVELS-MFEDALVTYVEAKKVGVELQVCNFLLKRLVEGNQIMYARSL--FD 200

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK------ETQLPNFLSFNIALCNLCK 197
           +M   G +PN ++ +++M +     ++ L   +        E   PN  ++   L  LC 
Sbjct: 201 DMKSSGPSPNVYSYSVLMSMYTHGAKLCLEEALELLSEMEVEGVRPNAATYATYLYGLCH 260

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              V +  + + M+ ++G+  N   F  +++ FC  G++ +A ++   M   G    V++
Sbjct: 261 AKQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHKAIEVFDGMKKCGFVPDVHS 320

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +++L+DG  +   +    Y+  +M +NG +PN+V+Y+SL+ G   A    +AF     L+
Sbjct: 321 YSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLK 380

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
            +G   D + +++++    +    +   D+++ ++    VPD+Y + SL+   C   +  
Sbjct: 381 DQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLK 440

Query: 378 ---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
               + +L+    +  ++V    L+  F   G   +A    + +   G  P   ++  ++
Sbjct: 441 EALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPSLCTYRVII 500

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            GLC   K ++   ++  ++      +  +++ I+D  ++A    +A +L+ + + E   
Sbjct: 501 HGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTK 560

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
            ++ +YT  I GL    +  E   L+  M    + P+   Y  ++  +CK  N+K    +
Sbjct: 561 PNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSLIACYCKRSNMKAALEI 620

Query: 555 LQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
            +++    +  D      L     K  +   A   + EM N GL P
Sbjct: 621 FREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTP 666



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 105/433 (24%), Positives = 193/433 (44%), Gaps = 36/433 (8%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALC 193
            +E FD M + GF P+  + +I++D L K G V  G  +L E       PN +S++  L 
Sbjct: 302 AIEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLH 361

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
            LC+   V    ++   +  +GF  +  ++ I+L+  C+   +   Y L   M+      
Sbjct: 362 GLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVP 421

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
               ++ LI  + R R+L  A  ++E MV +G  PNVVT T L+ GF    +   AF FL
Sbjct: 422 DAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFL 481

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           D +   G  P L  + V+I  L K+   +D   ++  +++   VPD+             
Sbjct: 482 DKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDT------------- 528

Query: 374 GRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
                              V+Y+ ++  F KA    +A +LY  M+D+G  P+ +++  L
Sbjct: 529 -------------------VLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSL 569

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           + GLC   K+ E + +++ ++    A +  ++T+++    +      A+++FR    E  
Sbjct: 570 INGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSLIACYCKRSNMKAALEIFREMETEGL 629

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
             D   YT  I G  +    + A +   +M +  + P   TY  +++ + K  + K    
Sbjct: 630 SADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIVGYFKIGDEKKAMA 689

Query: 554 LLQDVIDARIELD 566
           +   ++ A I  D
Sbjct: 690 MYNSMLQAGIAPD 702



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 83/365 (22%), Positives = 162/365 (44%), Gaps = 50/365 (13%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF----LSFNIALCNLCKLN 199
           EM R G TPN  + + ++  L + GRV+L  ++ K  +   F    + ++I L   C+  
Sbjct: 343 EMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHL 402

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
           D+    D+   MV   F P+   +  L+  +C+  ++ EA ++  LM++ G   +V   T
Sbjct: 403 DLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCT 462

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK----MFSIAFSFLDM 315
           +L+ GF     +  A    +K+ Q G  P++ TY  +I G  +      M+ I   F DM
Sbjct: 463 ILVHGFSNEGLIGEAFLFLDKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGI---FADM 519

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
           ++  G+ PD V ++++ID   K     +A  +Y  +++    P+ +T+ SL++ +C   +
Sbjct: 520 IK-RGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDK 578

Query: 376 FS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLY----------------- 415
                 L K + G  +  D ++Y +L++ +CK      A++++                 
Sbjct: 579 LPEVMTLFKHMIGEGLAPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTC 638

Query: 416 ------------------NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
                               M++KG TP   ++  L+ G        +A+ +Y  ++   
Sbjct: 639 LIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIVGYFKIGDEKKAMAMYNSMLQAG 698

Query: 458 PAVNA 462
            A +A
Sbjct: 699 IAPDA 703



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/315 (23%), Positives = 135/315 (42%), Gaps = 36/315 (11%)

Query: 116 VIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIK 175
           V  A  +   +  Y R       LE F+ M   G  PN     I++      G +     
Sbjct: 420 VPDAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFL 479

Query: 176 VLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFC 231
            L + +    +P+  ++ + +  LCK+N  +++  +   M+++G+ P+  ++ I+++ F 
Sbjct: 480 FLDKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFV 539

Query: 232 KMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVV 291
           K   + EA++L   M+  GT  ++  +T LI+G     +L     L++ M+  G +P+ +
Sbjct: 540 KALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRI 599

Query: 292 TYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGL 351
            YTSLI  + +      A      +E+EG + D   +  LI   SK+ + D A    + +
Sbjct: 600 LYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEM 659

Query: 352 LELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQA 411
           +   L P   T+                           DL+V      YF K G   +A
Sbjct: 660 MNKGLTPTVVTY--------------------------TDLIV-----GYF-KIGDEKKA 687

Query: 412 VKLYNTMLDKGFTPD 426
           + +YN+ML  G  PD
Sbjct: 688 MAMYNSMLQAGIAPD 702


>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 807

 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 104/489 (21%), Positives = 202/489 (41%), Gaps = 36/489 (7%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG 173
           GC      +   +   ++    G   + F EM + G  PN    N V+  L K   VD  
Sbjct: 206 GCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKA 265

Query: 174 IKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
             +L++       P+ +++N  +     L        +   M  +G  PN       +  
Sbjct: 266 QGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAF 325

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
            CK GRI EA +    M+  G  L++ +++ L+ G+     L     L+  MV++G  PN
Sbjct: 326 LCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPN 385

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
              +  L+ G+ +  M   A    + ++  G  PD++ +  +I    +MGS DDA+D ++
Sbjct: 386 QHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFN 445

Query: 350 GLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPN 409
            +++                                  VE +  VY  L+  FC  G   
Sbjct: 446 HMIDKG--------------------------------VEPNFAVYQCLIQGFCTHGDLV 473

Query: 410 QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
           +A +L   + +KG  P   SF  L+  LC   ++ EA  ++  I+      + ++ T+++
Sbjct: 474 KAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLI 533

Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
           D     G+  +A ++    +      D+V+Y   + G  + GR ++  IL+ ++ H  V 
Sbjct: 534 DGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVK 593

Query: 530 PNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQ 589
           P  +TY ++L            K + Q++I++ I +   T   L   + + + +  A+  
Sbjct: 594 PTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITV 653

Query: 590 LVEMCNLGL 598
             ++C + +
Sbjct: 654 FQKLCAMNV 662



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 115/492 (23%), Positives = 209/492 (42%), Gaps = 46/492 (9%)

Query: 101 ETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIV 160
           +  +GI+ ++   G      T+   +  Y     +   +  F EM   G  PNT   +  
Sbjct: 263 DKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTF 322

Query: 161 MDVLFKIGRVDLGIK----VLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
           +  L K GR++   +    +L +    N +S++  L        + ++ ++  +MVR G 
Sbjct: 323 VAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGI 382

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
            PN  +F IL+N + K G + EA  +   M   G +  V  +  +I  F R+  +D A  
Sbjct: 383 VPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMD 442

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
            +  M+  G  PN   Y  LI+GF        A   +  + ++G  P ++    LI+ L 
Sbjct: 443 KFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLC 502

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLV 393
           K G   +A  ++D ++      D   F SL+   CL G+ S   ++   +  + +E D+V
Sbjct: 503 KEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIV 562

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF---------VG------------ 432
            Y  L++  CK G  +  + L+  +L KG  P  +++          G            
Sbjct: 563 TYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEM 622

Query: 433 --------------LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
                         LL GLC     +EAI V+Q +   N   +  +   ++ ++ +A R 
Sbjct: 623 IESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRR 682

Query: 479 HKAIQLFRRAIVEKYPL--DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
            +A  LF  A +  Y L   V +YT+ +  L++ G  EEA  ++S M    + P ++   
Sbjct: 683 EEAEGLF--ASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFIN 740

Query: 537 VMLLSFCKERNI 548
           V++ +  ++  I
Sbjct: 741 VIVRTLLEKGEI 752



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 97/426 (22%), Positives = 192/426 (45%), Gaps = 23/426 (5%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLT--------GRFETVRGIVGELARVGCVIKAQTFLLFL 126
           + R++F  + +  H +++++  T        G    +  +   + R G V     F + +
Sbjct: 334 EAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILV 393

Query: 127 RIYWRGEMYGMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIK----VLKE 179
             Y +    GMV EA   F++M + G  P+      V+    ++G +D  +     ++ +
Sbjct: 394 NGYAK---CGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDK 450

Query: 180 TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEA 239
              PNF  +   +   C   D+   ++++  +  KG  P +  F  L+N  CK GR+ EA
Sbjct: 451 GVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEA 510

Query: 240 YQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG 299
            ++  ++I  G    VN +T LIDG+  + ++  A  + + MV  G  P++VTY +L+ G
Sbjct: 511 QRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNG 570

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
             +             L  +G  P    + +++D L   G    A +++  ++E  +   
Sbjct: 571 CCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVT 630

Query: 360 SYTFCSLLSTVCLSG----RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLY 415
             T+  LL+ +C +       ++  KL C + V+ D+V+ N ++S   KA    +A  L+
Sbjct: 631 IPTYSILLTGLCRNNCTEEAITVFQKL-CAMNVKFDIVILNIMISKMFKARRREEAEGLF 689

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
            ++ D G  P   ++  ++  L     ++EA  V+  ++ +  +  +H    IV  L+E 
Sbjct: 690 ASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEK 749

Query: 476 GRCHKA 481
           G   KA
Sbjct: 750 GEIVKA 755



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 177/391 (45%), Gaps = 10/391 (2%)

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA-GY 276
           P V  + IL++C C+  R+  A+   G ++  G    V   + L+ G    +R D A   
Sbjct: 101 PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDV 160

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM-LESEGHAP-DLVFHNVLIDC 334
           L+ +M + GC P+ ++Y++++K   +      A   L M ++  G  P ++V ++ ++  
Sbjct: 161 LFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHG 220

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC----LSGRFSLLPKLVCGLEVEA 390
           L K G   +A D++  + +  + P+  T+ S++  +C    +     +L ++V G  V+ 
Sbjct: 221 LFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMV-GNGVQP 279

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           D V YN L+  +   G   QAV+++  M  +G  P+  +    +  LC   +I+EA   +
Sbjct: 280 DNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFF 339

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
             ++     +N   ++ ++     AG       LF   + +    +   + + + G  + 
Sbjct: 340 DSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKC 399

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
           G   EA  ++  M+   + P+  TY  ++ +FC+  ++         +ID  +E ++   
Sbjct: 400 GMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVY 459

Query: 571 IRLTKFIFKFHSSSSAVNQLV-EMCNLGLIP 600
             L +  F  H       +LV E+ N GL P
Sbjct: 460 QCLIQG-FCTHGDLVKAEELVYEIRNKGLGP 489



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 95/463 (20%), Positives = 182/463 (39%), Gaps = 45/463 (9%)

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV--------------------- 220
           LP   +++I +   C+   +       G ++R+G   +V                     
Sbjct: 100 LPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVD 159

Query: 221 ----RMFEI-----------LLNCFCKMGRIAEAYQLLGLMITLGTSLSVN--AWTVLID 263
               RM E+           +L   C  GR   A  +L + +  G     N   ++ ++ 
Sbjct: 160 VLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVH 219

Query: 264 GFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP 323
           G  +  ++  A  L+ +M Q G  PNVVTY S+I    +A+    A   L  +   G  P
Sbjct: 220 GLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQP 279

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV 383
           D V +N LI   S +G +  A+ ++  +    ++P++ T  + ++ +C  GR     +  
Sbjct: 280 DNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFF 339

Query: 384 CGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
             +  +    +++ Y+ LL  +  AG       L+N M+  G  P+ + F  L+ G    
Sbjct: 340 DSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKC 399

Query: 441 RKIDEAINVYQGIVMNNPAVNAHVHT--AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
             + EA+ +++   M    +N  V T  A++      G    A+  F   I +    +  
Sbjct: 400 GMVREAMFIFED--MQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFA 457

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
            Y   I+G    G   +A  L  ++++  + P   ++  ++   CKE  +   +R+   +
Sbjct: 458 VYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMI 517

Query: 559 IDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           I    + D +    L          S A      M ++G+ PD
Sbjct: 518 IRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPD 560



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/336 (21%), Positives = 132/336 (39%), Gaps = 61/336 (18%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRV-------DLGIKVLKETQLPNFLSFNIALCNLC 196
           E+   G  P   +   +++ L K GRV       D+ I+  ++  +  F S     C + 
Sbjct: 481 EIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIG 540

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
           K+++   V D    MV  G  P++  +  L+N  CK GRI +   L   ++  G   +  
Sbjct: 541 KMSEAFRVHDA---MVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTF 597

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF---------------- 300
            + +++DG     R   A  ++++M+++G +  + TY+ L+ G                 
Sbjct: 598 TYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKL 657

Query: 301 --------------MEAKMFSI-----AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
                         M +KMF       A      +   G  P +  + ++++ L K GS 
Sbjct: 658 CAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSV 717

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNA---- 397
           ++A  V+  +L+  L P S+    ++ T+   G        +C   V+   +++ A    
Sbjct: 718 EEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKAGIYMC--RVDGKSILFEASTAS 775

Query: 398 -LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
            LLS F   G   + + L          P  Y F G
Sbjct: 776 MLLSLFSCKGKHREHLNLL---------PAKYQFFG 802


>gi|255564599|ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223537382|gb|EEF39010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 544

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 105/443 (23%), Positives = 202/443 (45%), Gaps = 9/443 (2%)

Query: 42  QDFPIILAPHIVHSTLLNCPSDLIALSFFIWCAK-QRDYFHDVQSFDHMISVVTRLTGRF 100
           + +P  L P  + S +    +  +AL  F +  K Q ++ H+  ++D +I  ++R    F
Sbjct: 53  KPWPQRLYPKRLVSMITRQQNLDLALQIFEYAGKYQPNFSHNYDTYDSIIHKLSRAR-VF 111

Query: 101 ETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIV 160
             V  ++ +L +         F+  +R Y         L  F  +  F    +  + N +
Sbjct: 112 GPVELLLSDLHKSQIKCGENIFINVIRNYGLAGKPDFALRTFIRIQDFNVQRSVRSLNTL 171

Query: 161 MDVLFKIGRVDLGIKVLKETQ-----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG 215
           ++   +  R DL   + K  +     LPN  + NI +  LCK NDV +   V+  M   G
Sbjct: 172 LNAFVQNKRYDLVHAMFKNCRSKYGVLPNVFTCNILIKALCKKNDVESAVKVLDEMPAMG 231

Query: 216 FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAG 275
             PNV  +  +L  +   G +  A ++ G +   G       +T+L++G+    RL  A 
Sbjct: 232 MIPNVVTYTTILGGYSSRGDMVNANKVFGELFDRGWLPDATTYTILMNGYCEQGRLADAI 291

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
            L + M +NG  PN VTY  +++ + + K    A + LD +    + P       +ID L
Sbjct: 292 KLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARNLLDDMLERQYVPSSALCCKVIDVL 351

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA--DLV 393
            + G  ++A +++  +L+   +PD+    +L+  +C  G+     KL    E  A   L+
Sbjct: 352 CEAGKIEEACELWKRMLKKNCMPDNAIMSTLIHWLCKEGKVWEARKLFGEFERGAIPSLL 411

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            YN L++  C+ G  ++A KL++ M++KG+ P+ +++  L++G        E I + + +
Sbjct: 412 TYNTLIAGMCEKGELSEAGKLWDDMMEKGYKPNAFTYNMLIKGFSKIGNAKEGIRILEEM 471

Query: 454 VMNNPAVNAHVHTAIVDRLIEAG 476
           + N    N   +  +++ L + G
Sbjct: 472 LDNRCMPNKSTYAILIEELCKMG 494



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 74/350 (21%), Positives = 142/350 (40%), Gaps = 85/350 (24%)

Query: 125 FLRIYWRGEMYGMVLEAFDE-MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ-- 181
            L  + + + Y +V   F     ++G  PN F  NI++  L K   V+  +KVL E    
Sbjct: 171 LLNAFVQNKRYDLVHAMFKNCRSKYGVLPNVFTCNILIKALCKKNDVESAVKVLDEMPAM 230

Query: 182 --LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEA 239
             +PN +++   L       D+ N   V G +  +G+ P+   + IL+N +C+ GR+A+A
Sbjct: 231 GMIPNVVTYTTILGGYSSRGDMVNANKVFGELFDRGWLPDATTYTILMNGYCEQGRLADA 290

Query: 240 YQLLGLMITLGTSLSVNAWTVLIDGFRRLRR----------------------------- 270
            +L+  M   G   +   + V+++ + + ++                             
Sbjct: 291 IKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARNLLDDMLERQYVPSSALCCKVIDV 350

Query: 271 ------LDMAGYLWEKMVQNGCSPN----------------------------------V 290
                 ++ A  LW++M++  C P+                                  +
Sbjct: 351 LCEAGKIEEACELWKRMLKKNCMPDNAIMSTLIHWLCKEGKVWEARKLFGEFERGAIPSL 410

Query: 291 VTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDG 350
           +TY +LI G  E    S A    D +  +G+ P+   +N+LI   SK+G+  + + + + 
Sbjct: 411 LTYNTLIAGMCEKGELSEAGKLWDDMMEKGYKPNAFTYNMLIKGFSKIGNAKEGIRILEE 470

Query: 351 LLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLS 400
           +L+ + +P+  T+  L+  +C             G+E E D VV  A+ S
Sbjct: 471 MLDNRCMPNKSTYAILIEELC-----------KMGMEGEVDKVVSMAMAS 509



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/318 (21%), Positives = 145/318 (45%), Gaps = 5/318 (1%)

Query: 289 NVVTYTSLIKGFMEAKMFSIAFSFLDMLESE-GHAPDLVFHNVLIDCLSKMGSYDDALDV 347
           +V +  +L+  F++ K + +  +      S+ G  P++   N+LI  L K    + A+ V
Sbjct: 164 SVRSLNTLLNAFVQNKRYDLVHAMFKNCRSKYGVLPNVFTCNILIKALCKKNDVESAVKV 223

Query: 348 YDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCK 404
            D +  + ++P+  T+ ++L      G      K+   L       D   Y  L++ +C+
Sbjct: 224 LDEMPAMGMIPNVVTYTTILGGYSSRGDMVNANKVFGELFDRGWLPDATTYTILMNGYCE 283

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV 464
            G    A+KL + M + G  P+  ++  ++   C  +K  EA N+   ++      ++ +
Sbjct: 284 QGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARNLLDDMLERQYVPSSAL 343

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
              ++D L EAG+  +A +L++R + +    D    +  I  L + G+  EA  L+ + +
Sbjct: 344 CCKVIDVLCEAGKIEEACELWKRMLKKNCMPDNAIMSTLIHWLCKEGKVWEARKLFGEFE 403

Query: 525 HIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSS 584
             A+ P+  TY  ++   C++  +    +L  D+++   + +  T   L K   K  ++ 
Sbjct: 404 RGAI-PSLLTYNTLIAGMCEKGELSEAGKLWDDMMEKGYKPNAFTYNMLIKGFSKIGNAK 462

Query: 585 SAVNQLVEMCNLGLIPDE 602
             +  L EM +   +P++
Sbjct: 463 EGIRILEEMLDNRCMPNK 480



 Score = 46.6 bits (109), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 7/123 (5%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTF-LLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           G+    R + GE  R G +    T+  L   +  +GE+     + +D+M   G+ PN F 
Sbjct: 390 GKVWEARKLFGEFER-GAIPSLLTYNTLIAGMCEKGEL-SEAGKLWDDMMEKGYKPNAFT 447

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N+++    KIG    GI++L+E      +PN  ++ I +  LCK+     V  V+ M +
Sbjct: 448 YNMLIKGFSKIGNAKEGIRILEEMLDNRCMPNKSTYAILIEELCKMGMEGEVDKVVSMAM 507

Query: 213 RKG 215
             G
Sbjct: 508 ASG 510


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 114/470 (24%), Positives = 213/470 (45%), Gaps = 45/470 (9%)

Query: 109 ELARVGCVIKAQTFLLFL-RIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKI 167
           +L R G V+   +  LFL R+    E   + ++ F+E    G   NT + NIV+  L ++
Sbjct: 196 KLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQL 255

Query: 168 GRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMF 223
           G+V    +L +++      P+ +S+ + +   C++ ++  V  ++  +  KG  P+  ++
Sbjct: 256 GKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIY 315

Query: 224 EILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQ 283
             ++   CK G + EA QLL  M   G       +T +I GF +L  +  A  L+++M +
Sbjct: 316 NNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRR 375

Query: 284 NGCSPNVVTYTSLIKGFMEA-KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
               P++VTYTS+I G  ++ KM      F +ML  +G  PD V +  LID   K G   
Sbjct: 376 KKIVPDIVTYTSVIHGICKSGKMVEAREMFNEML-VKGLEPDEVTYTALIDGYCKAGEMK 434

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALL 399
           +A  V++ +++  L P+  T+ +L   +C +G   +  +L+  +    ++ ++  YN ++
Sbjct: 435 EAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIV 494

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
           +  CK G   Q VKL   M   GF PD  ++  L+   C                     
Sbjct: 495 NGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYC--------------------- 533

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
                         + G   KA +L R  + ++    +V++ V + G    G  E+   L
Sbjct: 534 --------------KMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERL 579

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
              M    + PNA T+  ++  +C + N++    + + + D  +  D +T
Sbjct: 580 IEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNT 629



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 86/362 (23%), Positives = 171/362 (47%), Gaps = 10/362 (2%)

Query: 136 GMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSF 188
           G V+EA      M ++G  P+      V+    K+G V    K+  E +    +P+ +++
Sbjct: 326 GEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTY 385

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
              +  +CK   +   +++   M+ KG  P+   +  L++ +CK G + EA+ +   M+ 
Sbjct: 386 TSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQ 445

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
            G + +V  +T L DG  +   +D+A  L  +M + G  PNV TY +++ G  +      
Sbjct: 446 KGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQ 505

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
               ++ ++  G  PD + +  L+D   KMG    A ++   +L  +L P   TF  L++
Sbjct: 506 TVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMN 565

Query: 369 TVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
             C+SG      +L+  +    +  +   +N+L+  +C         ++Y  M D+G  P
Sbjct: 566 GFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMP 625

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           D+ ++  L++G C AR + EA  +++ +V    +V A  + A++    +  +  +A +LF
Sbjct: 626 DSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLF 685

Query: 486 RR 487
             
Sbjct: 686 EE 687



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 55/252 (21%), Positives = 113/252 (44%), Gaps = 39/252 (15%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNL 195
           E   EM R G  PN +  N +++ L KIG ++  +K+++E  L    P+ +++   +   
Sbjct: 473 ELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAY 532

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
           CK+ +++   +++ +M+ K   P +  F +L+N FC  G + +  +L+  M+  G   + 
Sbjct: 533 CKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNA 592

Query: 256 -----------------------------------NAWTVLIDGFRRLRRLDMAGYLWEK 280
                                              N + +LI G  + R +  A +L ++
Sbjct: 593 TTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKE 652

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           MV+ G S    TY +LI+GF + K F  A    + +   G   +   +++ +D   + G+
Sbjct: 653 MVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGN 712

Query: 341 YDDALDVYDGLL 352
           ++  L++ D  +
Sbjct: 713 WEITLELCDEFM 724


>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1163

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 123/520 (23%), Positives = 234/520 (45%), Gaps = 30/520 (5%)

Query: 57  LLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARV--G 114
           L+  PS   AL FF W A +  + H+ QS+  M+ ++ R        R  +  + R   G
Sbjct: 95  LIKTPSK--ALQFFNW-APELGFTHNDQSYFLMLEILGRARN-LNVARNFLFSIKRRSNG 150

Query: 115 CV-IKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG 173
            V ++ + F   +R Y +  ++   ++ F+ M   G +P+    N ++ +L K GR ++ 
Sbjct: 151 TVKLEDRFFNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMA 210

Query: 174 IKVLKET-----QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLN 228
             V  E        P+  +FNI +   CK + V         M R    P++  +  L++
Sbjct: 211 QSVFDEMLSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVD 270

Query: 229 CFCKMGRIAEAYQLLGLMITLGTSLS--VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGC 286
             C+ G++  A+ ++  M+   T+L+  V  +T L+ G+     +D A  ++E+MV  G 
Sbjct: 271 GLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGL 330

Query: 287 SPNVVTYTSLIKGFME-AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL 345
            PN +TY +LIKG  E  K+  I   F   L   G  PD    N L++     G+ +DAL
Sbjct: 331 KPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDAL 390

Query: 346 DVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLV----------VY 395
           +V++ ++ L + PDS T+  L+  +C  G F    +L   L  +  L+           Y
Sbjct: 391 EVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAY 450

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
            ++  + C+ G   +A +++  ++ +G T D  SF  L++G C     +    +   ++ 
Sbjct: 451 KSMFEFLCRNGKTAKAERVFRQLMKRG-TQDPLSFKILIKGHCREGTFEAGYELLVLMLR 509

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
            +   +   + +++D L++ G    A Q   + I   +  +  ++   +  LL  G   E
Sbjct: 510 RDFVPDLETYQSLIDGLLQKGEPLVAYQTLEKMIKSSHVPETSTFHSILARLLAKGCAHE 569

Query: 516 AYILYSQMKHIAVPPN----AYTYRVMLLSFCKERNIKMV 551
           +      M    +  N     +T R++  S  +++  K+V
Sbjct: 570 SARFIMLMLEGKIRQNINLSTHTVRLLFGSGLRDKAFKIV 609



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/323 (24%), Positives = 148/323 (45%), Gaps = 40/323 (12%)

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD-MLESEGHAPDLVFHNVLIDCL 335
           ++  M   G SP+VVT+ SL+   ++    ++A S  D ML + G  PD    N+LI   
Sbjct: 178 VFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLSTYGVTPDTYTFNILIRGF 237

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL-----EVEA 390
            K    D+    +  +   K  PD  T+ +L+  +C +G+ ++   +V G+      +  
Sbjct: 238 CKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNP 297

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           D+V Y  L+  +C     ++A+ ++  M+ KG  P+  ++  L++GLC  +KID+   ++
Sbjct: 298 DVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIF 357

Query: 451 QGIVMN----------NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSY 500
           +G +            N  +NAH +         AG  + A+++F + +V     D  +Y
Sbjct: 358 EGALGGGGFIPDTCTLNTLMNAHCN---------AGNLNDALEVFEKMMVLNVRPDSATY 408

Query: 501 TVAIRGLLEGGRTEEAYILYSQMKHIAV-------PPNAYTYRVMLLSFCK-------ER 546
           +V IR L + G  E A  L+ ++    +        P    Y+ M    C+       ER
Sbjct: 409 SVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEFLCRNGKTAKAER 468

Query: 547 NIK-MVKRLLQDVIDARIELDYH 568
             + ++KR  QD +  +I +  H
Sbjct: 469 VFRQLMKRGTQDPLSFKILIKGH 491



 Score = 44.3 bits (103), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 41/213 (19%), Positives = 85/213 (39%), Gaps = 40/213 (18%)

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           +N+L+  + KAG   ++V+++N+M   G +P   +F  LL                    
Sbjct: 159 FNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLL-------------------- 198

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL--DVVSYTVAIRGLLEGGR 512
                        ++  L++ GR + A  +F   ++  Y +  D  ++ + IRG  +   
Sbjct: 199 -------------LI--LLKRGRTNMAQSVFDE-MLSTYGVTPDTYTFNILIRGFCKNSM 242

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL--DYHTS 570
            +E +  + +M      P+  TY  ++   C+   + +   ++  ++     L  D  T 
Sbjct: 243 VDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTY 302

Query: 571 IRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
             L +     H    A+    EM + GL P+E+
Sbjct: 303 TTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEI 335


>gi|225432738|ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
           mitochondrial [Vitis vinifera]
          Length = 535

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 108/417 (25%), Positives = 189/417 (45%), Gaps = 45/417 (10%)

Query: 46  IILAPHIVHSTLLNCPSDLI-ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVR 104
           + ++  +V   L    +D I A  FF W   Q  Y H + S++ M+ ++ +L  +F+ + 
Sbjct: 115 VSVSESLVEQVLKRFSNDWIPAFGFFKWAKAQTGYRHSMNSYNSMVDILGKLK-KFDLMW 173

Query: 105 GIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVL 164
            +V E+ R+G  +   T    +R   R   +   +EAF  M RFG   +T A N +MD L
Sbjct: 174 ELVEEMDRLGGYVSLATMTKVMRRLARASRWKDAIEAFRGMERFGVKKDTLAMNTLMDAL 233

Query: 165 FKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFE 224
            K   V+    V        F+ F                KD I +        N   F 
Sbjct: 234 VKENSVEHANDV--------FVEF----------------KDSILL--------NPHTFN 261

Query: 225 ILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN 284
           +L++ +CK  ++  A + +  M   G    V ++T +++ + R +       +  +M + 
Sbjct: 262 VLIHGWCKARKMDNALKSMAEMKEHGFCPDVISYTSIVEAYCREKDFRKVNSVLNEMEEK 321

Query: 285 GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
           GC PNVVTYT ++    + K  S A    + ++     PD  F++ LI  LSK G   DA
Sbjct: 322 GCPPNVVTYTIVMHALGKGKEISKALEVYEKMKGSSCVPDTSFYSSLIYILSKAGRLKDA 381

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSY 401
            DV++ + +   +PD  T+ +++S  C+  +     KL+  +E    + DL  Y+ LL  
Sbjct: 382 RDVFEDMTKQGAIPDVLTYNTMISAACMHSQEEDALKLLLKMEESSCKPDLNTYSPLLKM 441

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG----LLRGLCGARKIDEAINVYQGIV 454
            C+    N  +K+ + +L+  F  D    VG    L+ GLC + K++ A   ++ +V
Sbjct: 442 CCR----NNRMKVLSALLNHMFKNDISLEVGTYSLLVHGLCKSGKLEHACLFFEEMV 494



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 79/358 (22%), Positives = 163/358 (45%), Gaps = 8/358 (2%)

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           G   S+N++  ++D   +L++ D+   L E+M + G   ++ T T +++    A  +  A
Sbjct: 148 GYRHSMNSYNSMVDILGKLKKFDLMWELVEEMDRLGGYVSLATMTKVMRRLARASRWKDA 207

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK--LVPDSYTFCSLL 367
                 +E  G   D +  N L+D L K  S + A DV+   +E K  ++ + +TF  L+
Sbjct: 208 IEAFRGMERFGVKKDTLAMNTLMDALVKENSVEHANDVF---VEFKDSILLNPHTFNVLI 264

Query: 368 STVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
              C + +     K +  ++      D++ Y +++  +C+     +   + N M +KG  
Sbjct: 265 HGWCKARKMDNALKSMAEMKEHGFCPDVISYTSIVEAYCREKDFRKVNSVLNEMEEKGCP 324

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           P+  ++  ++  L   ++I +A+ VY+ +  ++   +   +++++  L +AGR   A  +
Sbjct: 325 PNVVTYTIVMHALGKGKEISKALEVYEKMKGSSCVPDTSFYSSLIYILSKAGRLKDARDV 384

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
           F     +    DV++Y   I       + E+A  L  +M+  +  P+  TY  +L   C+
Sbjct: 385 FEDMTKQGAIPDVLTYNTMISAACMHSQEEDALKLLLKMEESSCKPDLNTYSPLLKMCCR 444

Query: 545 ERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
              +K++  LL  +    I L+  T   L   + K      A     EM + GL+P +
Sbjct: 445 NNRMKVLSALLNHMFKNDISLEVGTYSLLVHGLCKSGKLEHACLFFEEMVSKGLVPKD 502



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/223 (21%), Positives = 98/223 (43%), Gaps = 5/223 (2%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           K+  +  DV S+  ++    R    F  V  ++ E+   GC     T+ + +    +G+ 
Sbjct: 284 KEHGFCPDVISYTSIVEAYCR-EKDFRKVNSVLNEMEEKGCPPNVVTYTIVMHALGKGKE 342

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNI 190
               LE +++M      P+T   + ++ +L K GR+    D+   + K+  +P+ L++N 
Sbjct: 343 ISKALEVYEKMKGSSCVPDTSFYSSLIYILSKAGRLKDARDVFEDMTKQGAIPDVLTYNT 402

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +   C  +   +   ++  M      P++  +  LL   C+  R+     LL  M    
Sbjct: 403 MISAACMHSQEEDALKLLLKMEESSCKPDLNTYSPLLKMCCRNNRMKVLSALLNHMFKND 462

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTY 293
            SL V  +++L+ G  +  +L+ A   +E+MV  G  P   T+
Sbjct: 463 ISLEVGTYSLLVHGLCKSGKLEHACLFFEEMVSKGLVPKDCTH 505



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 49/226 (21%), Positives = 95/226 (42%), Gaps = 4/226 (1%)

Query: 107 VGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK 166
           + E+   G      ++   +  Y R + +  V    +EM   G  PN     IVM  L K
Sbjct: 280 MAEMKEHGFCPDVISYTSIVEAYCREKDFRKVNSVLNEMEEKGCPPNVVTYTIVMHALGK 339

Query: 167 IGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
              +   ++V ++ +    +P+   ++  +  L K   + + +DV   M ++G  P+V  
Sbjct: 340 GKEISKALEVYEKMKGSSCVPDTSFYSSLIYILSKAGRLKDARDVFEDMTKQGAIPDVLT 399

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           +  +++  C   +  +A +LL  M        +N ++ L+    R  R+ +   L   M 
Sbjct: 400 YNTMISAACMHSQEEDALKLLLKMEESSCKPDLNTYSPLLKMCCRNNRMKVLSALLNHMF 459

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH 328
           +N  S  V TY+ L+ G  ++     A  F + + S+G  P    H
Sbjct: 460 KNDISLEVGTYSLLVHGLCKSGKLEHACLFFEEMVSKGLVPKDCTH 505


>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 109/451 (24%), Positives = 188/451 (41%), Gaps = 36/451 (7%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           L G     +  +  L R G    +  +  F+  Y R  +       F  M   G     F
Sbjct: 84  LAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAF 143

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
               ++  L   G V   + V    Q     P+   +   +  LC        + ++   
Sbjct: 144 TYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDA 203

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
           + +GF PNV ++  L++ +C +G +  A  +   M   G S +V  +T LI GF + R+L
Sbjct: 204 MAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKL 263

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           D A  L+ +MV  G  PNVVTYT+LI+G         A+  L  +E+ G  P+    +VL
Sbjct: 264 DRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVL 323

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEAD 391
           ID L K     +A  +   L++  +  +   + SL+  +C +GRF+              
Sbjct: 324 IDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFA-------------- 369

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
                              A +L  T++ +GF PD +++  L+ GLC  +++ EA+ V  
Sbjct: 370 ------------------AADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLD 411

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
            ++      +   +T I+D L+       + ++  + I      DV +YT+ +R     G
Sbjct: 412 DMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEG 471

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
           R E+A  +   M    V PN  TY  ++  +
Sbjct: 472 RMEDAEHMMLHMVDHGVCPNLVTYNALICGY 502



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 100/421 (23%), Positives = 189/421 (44%), Gaps = 3/421 (0%)

Query: 184 NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
           N  ++   +   C   D+   K  +  ++R GF P+   +   +  +C+ G +A A +L 
Sbjct: 71  NLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLF 130

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
            LM   G   +   +T L+ G      +  A  ++  M  +GC+P+   Y +++ G   A
Sbjct: 131 VLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGA 190

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
                A + L    +EG  P++V +N LID    +G  + A+DV++ +      P+  T+
Sbjct: 191 GRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTY 250

Query: 364 CSLLSTVCLS---GRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
             L+S  C S    R  +L   +    +  ++V Y AL+   C  G  + A +L  +M +
Sbjct: 251 TELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMEN 310

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
            G  P+ ++   L+  LC   ++ EA  +   ++     VN  V+T+++D L +AGR   
Sbjct: 311 SGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAA 370

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
           A +L +  + + +  D  +Y+  I GL       EA ++   M    V P+  TY +++ 
Sbjct: 371 ADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIID 430

Query: 541 SFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
              +E      K++L  +I A I+ D  T     +          A + ++ M + G+ P
Sbjct: 431 ELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCP 490

Query: 601 D 601
           +
Sbjct: 491 N 491



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 110/472 (23%), Positives = 196/472 (41%), Gaps = 64/472 (13%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNV 204
           GF PN    N ++D    +G ++L + V +   +    PN  ++   +   CK   +   
Sbjct: 207 GFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRA 266

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT--VLI 262
             +   MV  G  PNV  +  L+   C  G++  AY+LL  M   G  L  N WT  VLI
Sbjct: 267 MMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSG--LVPNEWTCSVLI 324

Query: 263 DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
           D   +  R+  A  L   ++Q G   N + YTSLI G  +A  F+ A   +  L S+G  
Sbjct: 325 DALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFV 384

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC----SLLSTVCLSGRFSL 378
           PD   ++ LID L +     +A+ V D ++E  + P   T+      L+  V   G   +
Sbjct: 385 PDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKI 444

Query: 379 LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
           L K++    ++ D+  Y   +  +C  G    A  +   M+D G  P+  ++  L+ G  
Sbjct: 445 LDKMIAA-GIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYA 503

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK----AIQLFRRAIVE--- 491
                 +A + ++ +V N    N   +T ++  LI+    +     ++ +++ A ++   
Sbjct: 504 NLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLH 563

Query: 492 ---------KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP--NAYT------ 534
                    + P ++  Y   +  L    R +EA IL  +M+   + P  + YT      
Sbjct: 564 GLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACC 623

Query: 535 ---------------------------YRVMLLSFCKERNIKMVKRLLQDVI 559
                                      YR ++ S C+E +I+  K++  D++
Sbjct: 624 CRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDML 675



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 95/439 (21%), Positives = 187/439 (42%), Gaps = 31/439 (7%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVD-----LGIKVLKETQLPNFLSFNIALCNLC 196
              M   G  PN +  ++++D L K  RV      LG  + K  ++ N + +   +  LC
Sbjct: 305 LQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKV-NEIVYTSLIDGLC 363

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
           K    +    ++  +V +GF P+   +  L++  C+   ++EA  +L  M+  G   S  
Sbjct: 364 KAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPV 423

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM-EAKMFSIAFSFLDM 315
            +T++ID   R    D +  + +KM+  G  P+V TYT  ++ +  E +M       L M
Sbjct: 424 TYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHM 483

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
           ++  G  P+LV +N LI   + +G    A   +  ++     P+  ++  LL  +     
Sbjct: 484 VD-HGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKES 542

Query: 376 FSLLP-------------------KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYN 416
            + +P                   + +  L++ +++ +YN  L+  C+    ++A  L  
Sbjct: 543 SNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLI 602

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN--PAVNAHVHTAIVDRLIE 474
            M     TP    +  ++   C  + + EA+     +V +   P + ++ H  I+  L E
Sbjct: 603 EMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRH--IISSLCE 660

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
            G    A Q+F   + ++Y  + +++ + I GLL+ G   E   L S M+     P+   
Sbjct: 661 EGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRPSDAL 720

Query: 535 YRVMLLSFCKERNIKMVKR 553
           Y  +        +I+ + R
Sbjct: 721 YARLTGKITDANDIQEIAR 739


>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Cucumis sativus]
          Length = 505

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 124/481 (25%), Positives = 208/481 (43%), Gaps = 45/481 (9%)

Query: 130 WRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD----LGIKVLKETQLPNF 185
           ++ ++    L++F  M   G +P++F+ N  +D+L K G +D       + L  TQ  + 
Sbjct: 49  FQSQLLEQSLDSFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGRTQF-DV 107

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGL 245
            SF I +   C+  +VS   +++  M   G  PNV ++ IL+   C+ G I +A  +   
Sbjct: 108 YSFGITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSR 167

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           M  LG + +   +T++I+GF +         L++KM   G  PN+ TY SLI  +     
Sbjct: 168 MDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGK 227

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
            S+AF   D +   G A + V +N+LI  L + G    A  + + +    + P + TF  
Sbjct: 228 LSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNM 287

Query: 366 LLSTVCLSGRF----SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
           L+  +C +G+     S L KL   + +   LV YN L+S F K G  +   +L   M D+
Sbjct: 288 LMDGLCNTGQLDKALSYLEKLKL-IGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDR 346

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
           G +P   ++  L+     +  I++A  ++   +M    +    HT               
Sbjct: 347 GISPSKVTYTILMNTFVRSDDIEKAYEMFH--LMKRIGLVPDQHT--------------- 389

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
                             Y V I GL   G   EA  LY  M  + + PN   Y  M+  
Sbjct: 390 ------------------YGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMING 431

Query: 542 FCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           +CKE N     + L++++   +  +  + I   + + K   S  A   L EM   GL P 
Sbjct: 432 YCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLKEMTEAGLKPP 491

Query: 602 E 602
           E
Sbjct: 492 E 492



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 73/334 (21%), Positives = 133/334 (39%), Gaps = 63/334 (18%)

Query: 113 VGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDL 172
           VG +    T+   +  Y R     +  + FDE+ + G   N                   
Sbjct: 206 VGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNA------------------ 247

Query: 173 GIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCK 232
                        +++NI +  LC+   VS  + ++  M R    P  R F +L++  C 
Sbjct: 248 -------------VTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCN 294

Query: 233 MGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVT 292
            G++ +A   L  +  +G   ++  + +LI GF ++    +   L  +M   G SP+ VT
Sbjct: 295 TGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVT 354

Query: 293 YTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
           YT L+  F+ +     A+    +++  G  PD   + VLI  L   G+  +A  +Y  ++
Sbjct: 355 YTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMV 414

Query: 353 ELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAV 412
           E+ L P+                                 V+YN +++ +CK     +A+
Sbjct: 415 EMHLQPND--------------------------------VIYNTMINGYCKECNSYKAL 442

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
           K    M+  G TP+  S++  ++ LC   K  EA
Sbjct: 443 KFLEEMVKNGVTPNVASYISTIQILCKDGKSIEA 476


>gi|17047023|gb|AAL34928.1|AC079037_1 Putative PPR-repeat protein [Oryza sativa]
 gi|31429883|gb|AAP51872.1| hypothetical protein LOC_Os10g02650 [Oryza sativa Japonica Group]
          Length = 949

 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 103/429 (24%), Positives = 197/429 (45%), Gaps = 18/429 (4%)

Query: 148 FGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSN 203
           +G  P+    NIV+  L +  R+D    ++   Q     P+  + +I +   CK+ ++ +
Sbjct: 427 YGCEPSVLTYNIVIKCLCEQNRMDDARALITIMQSRGVRPDMSTNSIMVTAYCKIGEIES 486

Query: 204 VKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLID 263
              + G M + G  P++ +++ ++ C C+M R+ EA   L  MI  G +     +T LI+
Sbjct: 487 ALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRRLKEAEATLRQMIREGLAPDEIIYTSLIN 546

Query: 264 GFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP 323
           G+   R+      ++++M++ G  P    Y SLI G ++      A  +L+ +  EG AP
Sbjct: 547 GYSLTRQTRNVCRIFDEMLKRGLQPGPHAYGSLINGLVKGNKIRKALGYLERMLEEGIAP 606

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS-GRFSLLPKL 382
             V + +LI+   + G     LD+   +++  + PD  T+ +L++ +C +  R  + P L
Sbjct: 607 QTVIYTMLINQFFRKGDVRLGLDLVVLMMKTNVAPDLITYGALVTGICRNIARRGMRPSL 666

Query: 383 VCGLEVEADLVVYNALL------------SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
              L+ EA  +++  L             +  C       A  +   + + G  PD + +
Sbjct: 667 AKKLK-EARYMLFRMLPQIIDTRNGKQKDNQICTEEMIQVAQGIIQDLEENGMVPDLHIY 725

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
            G++ GLC A K+D+A ++   +       N   +T +++  I  G  + AIQLF     
Sbjct: 726 NGMINGLCRANKMDDAYSLLSVMDQTGILPNHVTYTILMNNQIRLGDINHAIQLFNSLNS 785

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
           +    D ++Y   I+GL   GR +EA      M      P+  +Y  ++     E  I +
Sbjct: 786 DGCVFDKITYNTFIKGLSLAGRMKEALSFLLMMHKRGFVPSKASYDKLMELLLAENAIDI 845

Query: 551 VKRLLQDVI 559
           V +L +D++
Sbjct: 846 VLQLFEDML 854



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 112/549 (20%), Positives = 212/549 (38%), Gaps = 60/549 (10%)

Query: 125 FLRIYWRGEMYGMVLEAFDEM-GRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ-- 181
            +R++ R       L+ F  M G      + +A   ++  LF+ GRVD G+++  E    
Sbjct: 193 LIRVFCREGRLEPALDVFRRMKGDEHVQLDAYAYTTMIWGLFEHGRVDHGLQMYHEMIDR 252

Query: 182 --LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEA 239
              P+  ++N+ +   CK   V    D+  +M+R G  P++R + IL+   CK G++ EA
Sbjct: 253 GIQPDAATYNVMIRWYCKSKWVGAAMDIYKVMIRTGVAPDLRCYTILMASLCKDGKLGEA 312

Query: 240 YQLLGLMITLG-----------TSLSVNAWTVLI--DGFRRLRRLDMAGYLWE-KMVQNG 285
             L   M+  G                  W VL      + + +LD    L E   +  G
Sbjct: 313 ENLFDKMLESGLFPDHVMFISIARFFPKGWVVLFVRKALKAVAKLDCGAKLLELSSLAGG 372

Query: 286 CS---------------------PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
           CS                     P  +    +I          +++  L  L + G  P 
Sbjct: 373 CSNMSLQKEADHLLDEIVTSNVLPVNIVLNLMIIAMCSEGRLDVSYYLLGKLVAYGCEPS 432

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVC 384
           ++ +N++I CL +    DDA  +   +    + PD  T   +++  C  G       L  
Sbjct: 433 VLTYNIVIKCLCEQNRMDDARALITIMQSRGVRPDMSTNSIMVTAYCKIGEIESALHLFG 492

Query: 385 GLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
            +    +E  + VY++++   C+     +A      M+ +G  PD   +  L+ G    R
Sbjct: 493 EMAKDGIEPSIAVYDSIIVCLCRMRRLKEAEATLRQMIREGLAPDEIIYTSLINGYSLTR 552

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYT 501
           +      ++  ++        H + ++++ L++  +  KA+    R + E      V YT
Sbjct: 553 QTRNVCRIFDEMLKRGLQPGPHAYGSLINGLVKGNKIRKALGYLERMLEEGIAPQTVIYT 612

Query: 502 VAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
           + I      G       L   M    V P+  TY  ++   C  RNI   +R ++  +  
Sbjct: 613 MLINQFFRKGDVRLGLDLVVLMMKTNVAPDLITYGALVTGIC--RNI--ARRGMRPSLAK 668

Query: 562 RIELDYHTSIRLTKFIFKFHSSSSAVNQLV--EMCNL--GLIPDEMWRKLGLLSDETMTP 617
           +++   +   R+   I    +     NQ+   EM  +  G+I D        L +  M P
Sbjct: 669 KLKEARYMLFRMLPQIIDTRNGKQKDNQICTEEMIQVAQGIIQD--------LEENGMVP 720

Query: 618 -VSLFDGFV 625
            + +++G +
Sbjct: 721 DLHIYNGMI 729



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 110/534 (20%), Positives = 225/534 (42%), Gaps = 40/534 (7%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR +    +  E+   G    A T+ + +R Y + +  G  ++ +  M R G  P+    
Sbjct: 237 GRVDHGLQMYHEMIDRGIQPDAATYNVMIRWYCKSKWVGAAMDIYKVMIRTGVAPDLRCY 296

Query: 158 NIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
            I+M  L K G++    +L  K+L+    P+ + F I++            K  + + VR
Sbjct: 297 TILMASLCKDGKLGEAENLFDKMLESGLFPDHVMF-ISIARFFP-------KGWVVLFVR 348

Query: 214 KGFYP------NVRMFEI--LLNCFCKMGRIAEAYQLLGLMITLGTSLSVN-AWTVLIDG 264
           K            ++ E+  L      M    EA  LL  ++T    L VN    ++I  
Sbjct: 349 KALKAVAKLDCGAKLLELSSLAGGCSNMSLQKEADHLLDEIVT-SNVLPVNIVLNLMIIA 407

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
                RLD++ YL  K+V  GC P+V+TY  +IK   E      A + + +++S G  PD
Sbjct: 408 MCSEGRLDVSYYLLGKLVAYGCEPSVLTYNIVIKCLCEQNRMDDARALITIMQSRGVRPD 467

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVC 384
           +  +++++    K+G  + AL ++  + +  + P    + S++  +C   R       + 
Sbjct: 468 MSTNSIMVTAYCKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRRLKEAEATLR 527

Query: 385 GLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
            +  E    D ++Y +L++ +          ++++ ML +G  P  +++  L+ GL    
Sbjct: 528 QMIREGLAPDEIIYTSLINGYSLTRQTRNVCRIFDEMLKRGLQPGPHAYGSLINGLVKGN 587

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSY- 500
           KI +A+   + ++    A    ++T ++++    G     + L    +      D+++Y 
Sbjct: 588 KIRKALGYLERMLEEGIAPQTVIYTMLINQFFRKGDVRLGLDLVVLMMKTNVAPDLITYG 647

Query: 501 --------TVAIRGL---LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
                    +A RG+   L     E  Y+L+  +  I    N       +   C E  I+
Sbjct: 648 ALVTGICRNIARRGMRPSLAKKLKEARYMLFRMLPQIIDTRNGKQKDNQI---CTEEMIQ 704

Query: 550 MVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           + + ++QD+ +  +  D H    +   + + +    A + L  M   G++P+ +
Sbjct: 705 VAQGIIQDLEENGMVPDLHIYNGMINGLCRANKMDDAYSLLSVMDQTGILPNHV 758



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 94/414 (22%), Positives = 168/414 (40%), Gaps = 43/414 (10%)

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI-TLGTSLS 254
           CK     +  D+  +M+ KG Y +  +   L+  FC+ GR+  A  +   M       L 
Sbjct: 163 CKARRSLDASDMCQLMLIKGMYLDRELSTALIRVFCREGRLEPALDVFRRMKGDEHVQLD 222

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
             A+T +I G     R+D    ++ +M+  G  P+  TY  +I+ + ++K    A     
Sbjct: 223 AYAYTTMIWGLFEHGRVDHGLQMYHEMIDRGIQPDAATYNVMIRWYCKSKWVGAAMDIYK 282

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL-----ST 369
           ++   G APDL  + +L+  L K G   +A +++D +LE  L PD   F S+        
Sbjct: 283 VMIRTGVAPDLRCYTILMASLCKDGKLGEAENLFDKMLESGLFPDHVMFISIARFFPKGW 342

Query: 370 VCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
           V L  R +L  K V  L+  A L+  ++L           +A  L + ++     P N  
Sbjct: 343 VVLFVRKAL--KAVAKLDCGAKLLELSSLAGGCSNMSLQKEADHLLDEIVTSNVLPVNIV 400

Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
              ++  +C   ++D                   V   ++ +L+  G C  +        
Sbjct: 401 LNLMIIAMCSEGRLD-------------------VSYYLLGKLVAYG-CEPS-------- 432

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
                  V++Y + I+ L E  R ++A  L + M+   V P+  T  +M+ ++CK   I+
Sbjct: 433 -------VLTYNIVIKCLCEQNRMDDARALITIMQSRGVRPDMSTNSIMVTAYCKIGEIE 485

Query: 550 MVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
               L  ++    IE        +   + +      A   L +M   GL PDE+
Sbjct: 486 SALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRRLKEAEATLRQMIREGLAPDEI 539



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 128/286 (44%), Gaps = 4/286 (1%)

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC-LSGRFSLLP 380
           APD    + L+ C S++G    AL  +  L++    P   +  +LL  +C  S     + 
Sbjct: 44  APDPAVSDALVACHSRLGDISSALSHFHRLVQSGAAPSPASTAALLRAMCSASMSTEAMD 103

Query: 381 KLVCGLEVEADLVV--YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
            LV  +   + L V  +  L+   C  G  ++A  L++ ML  G TP    +  L    C
Sbjct: 104 VLVLSMGNPSPLPVSDFALLIPGLCSEGAVDKARFLFDAMLRSGLTPPVRVYRSLAFAYC 163

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY-PLDV 497
            AR+  +A ++ Q +++    ++  + TA++      GR   A+ +FRR   +++  LD 
Sbjct: 164 KARRSLDASDMCQLMLIKGMYLDRELSTALIRVFCREGRLEPALDVFRRMKGDEHVQLDA 223

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
            +YT  I GL E GR +    +Y +M    + P+A TY VM+  +CK + +     + + 
Sbjct: 224 YAYTTMIWGLFEHGRVDHGLQMYHEMIDRGIQPDAATYNVMIRWYCKSKWVGAAMDIYKV 283

Query: 558 VIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           +I   +  D      L   + K      A N   +M   GL PD +
Sbjct: 284 MIRTGVAPDLRCYTILMASLCKDGKLGEAENLFDKMLESGLFPDHV 329



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 85/439 (19%), Positives = 172/439 (39%), Gaps = 53/439 (12%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWR-GEMYGMVLEAFDEMGRFGFTPNTFAR 157
           R +  R ++  +   G      T  + +  Y + GE+    L  F EM + G  P+    
Sbjct: 448 RMDDARALITIMQSRGVRPDMSTNSIMVTAYCKIGEIES-ALHLFGEMAKDGIEPSIAVY 506

Query: 158 NIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           + ++  L ++ R+        ++++E   P+ + +   +          NV  +   M++
Sbjct: 507 DSIIVCLCRMRRLKEAEATLRQMIREGLAPDEIIYTSLINGYSLTRQTRNVCRIFDEMLK 566

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +G  P    +  L+N   K  +I +A   L  M+  G +     +T+LI+ F R   + +
Sbjct: 567 RGLQPGPHAYGSLINGLVKGNKIRKALGYLERMLEEGIAPQTVIYTMLINQFFRKGDVRL 626

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKG-----------------FMEAK------------ 304
              L   M++   +P+++TY +L+ G                   EA+            
Sbjct: 627 GLDLVVLMMKTNVAPDLITYGALVTGICRNIARRGMRPSLAKKLKEARYMLFRMLPQIID 686

Query: 305 ---------------MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
                          M  +A   +  LE  G  PDL  +N +I+ L +    DDA  +  
Sbjct: 687 TRNGKQKDNQICTEEMIQVAQGIIQDLEENGMVPDLHIYNGMINGLCRANKMDDAYSLLS 746

Query: 350 GLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAG 406
            + +  ++P+  T+  L++     G  +   +L   L  +    D + YN  +     AG
Sbjct: 747 VMDQTGILPNHVTYTILMNNQIRLGDINHAIQLFNSLNSDGCVFDKITYNTFIKGLSLAG 806

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
              +A+     M  +GF P   S+  L+  L     ID  + +++ ++          +T
Sbjct: 807 RMKEALSFLLMMHKRGFVPSKASYDKLMELLLAENAIDIVLQLFEDMLFQGYTPRYANYT 866

Query: 467 AIVDRLIEAGRCHKAIQLF 485
           +++  L + GR  +A ++F
Sbjct: 867 SLLLVLAKDGRWSEADRIF 885


>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
 gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 118/468 (25%), Positives = 214/468 (45%), Gaps = 12/468 (2%)

Query: 85  SFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTF-LLFLRIYWRGEMYGMVLEAFD 143
           +F+ ++S + +   R E  R ++ E+   G V    T+ ++F  +    +  G  L+ + 
Sbjct: 173 TFNSLLSGLCKAR-RIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYR 231

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE----TQLPNFLSFNIALCNLCKLN 199
           E    G   + +  +I+++ L K G+V+   +VLK       +P  + +N  +   C++ 
Sbjct: 232 EAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIG 291

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
           D+      I  M  +G  PN   F  +++ FC+M  I +A + +  M+  G + SV  + 
Sbjct: 292 DMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYN 351

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF-MEAKMFSIAFSFLDMLES 318
           +LIDG+ RL        + E+M +NG  PNV++Y SLI     + K+        DM+  
Sbjct: 352 ILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMV-G 410

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL 378
            G  P+   +N+LID    +G   +AL  +D + +  +     T+ SL+  +C  G+   
Sbjct: 411 RGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKE 470

Query: 379 LPK---LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
             +   L+       D++ YN+L+S +  AG   + ++LY TM   G  P   +F  L+ 
Sbjct: 471 AEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLIS 530

Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
           G C    I     ++  ++  N + +  V+ A++    E G   KA  L +  +      
Sbjct: 531 G-CSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRP 589

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           D  +Y   I G L+ G+  E   L   MK   + P A TY +++   C
Sbjct: 590 DNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHC 637



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 112/434 (25%), Positives = 198/434 (45%), Gaps = 10/434 (2%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWR-GEMYGMVLEAFDEMGRFGFTPNTFA 156
           G+ E    ++  L   G V     +   +  Y + G+M   +L   ++M   G  PN  A
Sbjct: 256 GKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAIL-TIEQMESRGLRPNCIA 314

Query: 157 RNIVMDVLFKIGRVDLG----IKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N V+D   ++  +D       K++ +   P+  ++NI +    +L   S    ++  M 
Sbjct: 315 FNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEME 374

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
             G  PNV  +  L+NC CK G+I EA  +L  M+  G   + N + +LIDG   + +L 
Sbjct: 375 ENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLR 434

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A   +++M +NG    +VTY SLIKG  +      A     ++ S GH PD++ +N LI
Sbjct: 435 EALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLI 494

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG---RFSLLPKLVCGLEVE 389
              S  G+    L++Y+ + +L L P   TF  L+S     G   + +L  +++  + + 
Sbjct: 495 SGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKETLFNEML-QMNLS 553

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            D VVYNA++  + + G   +A  L   M+D G  PDN ++  L+ G     K+ E  ++
Sbjct: 554 PDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDL 613

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
              +        A  ++ ++    +    + A   +R  +   +  +V        GL +
Sbjct: 614 VDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRK 673

Query: 510 GGRTEEAYILYSQM 523
            GR +EA  + S+M
Sbjct: 674 DGRLQEAQSICSEM 687



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 109/425 (25%), Positives = 195/425 (45%), Gaps = 23/425 (5%)

Query: 149 GFTPNTFARNIVMDVLFKI-----GRVDLGIKVL-KETQLPNFLSFNIALCNLCKLNDVS 202
           GF P+ F  +I+ D L K        +DL  + + K  ++ N+ + +I L  LCK   V 
Sbjct: 201 GFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNY-TCSILLNGLCKEGKVE 259

Query: 203 NVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLI 262
             ++V+  +V  G  P   ++  ++N +C++G +  A   +  M + G   +  A+  +I
Sbjct: 260 KAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVI 319

Query: 263 DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
           D F  ++ +D A    +KMV  G +P+V TY  LI G+    +FS  F  L+ +E  G  
Sbjct: 320 DKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEK 379

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR------- 375
           P+++ +  LI+CL K G   +A  V   ++   ++P++  +  L+   C  G+       
Sbjct: 380 PNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRF 439

Query: 376 FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
           F  + K   G    A +V YN+L+   CK G   +A +++  +   G  PD  ++  L+ 
Sbjct: 440 FDEMSKNGIG----ATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLIS 495

Query: 436 GLCGARKIDEAINVYQGI--VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           G   A    + + +Y+ +  +   P +N   H  I     E  +  +   LF   +    
Sbjct: 496 GYSNAGNSQKCLELYETMKKLGLKPTINT-FHPLISGCSKEGIKLKET--LFNEMLQMNL 552

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
             D V Y   I    E G  ++A+ L  +M  + V P+  TY  ++L   KE  +   K 
Sbjct: 553 SPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKD 612

Query: 554 LLQDV 558
           L+ D+
Sbjct: 613 LVDDM 617



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 119/493 (24%), Positives = 218/493 (44%), Gaps = 22/493 (4%)

Query: 124 LFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ-- 181
           + L +    +M+  V E +D M + G  P+     ++++ L +  + D  + + KE    
Sbjct: 1   MLLSVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGL 60

Query: 182 --LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEA 239
              P+ L +  A+    KL D+    ++   M R+   PNV ++ +L+   CK  RI +A
Sbjct: 61  GFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDA 120

Query: 240 YQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG 299
            +L G M       +   +  LIDG+ +   +D+A  L E+M +    P+++T+ SL+ G
Sbjct: 121 EKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSG 180

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD----ALDVYDGLLELK 355
             +A+    A   L+ ++  G  PD   ++++ D L K    DD    ALD+Y   +   
Sbjct: 181 LCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLK---SDDGAGAALDLYREAIGKG 237

Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLV----VYNALLSYFCKAGFPNQA 411
           +  D+YT   LL+ +C  G+     +++  L VE  LV    +YN +++ +C+ G  ++A
Sbjct: 238 VKIDNYTCSILLNGLCKEGKVEKAEEVLKSL-VEHGLVPGEVIYNTIVNGYCQIGDMDRA 296

Query: 412 VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD- 470
           +     M  +G  P+  +F  ++   C  + ID+A    + +V    A +   +  ++D 
Sbjct: 297 ILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDG 356

Query: 471 --RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAV 528
             RL    RC    Q+           +V+SY   I  L + G+  EA ++   M    V
Sbjct: 357 YGRLCVFSRC---FQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGV 413

Query: 529 PPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVN 588
            PNA  Y +++   C    ++   R   ++    I     T   L K + K      A  
Sbjct: 414 LPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEE 473

Query: 589 QLVEMCNLGLIPD 601
               + + G  PD
Sbjct: 474 MFFLITSTGHCPD 486



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 91/388 (23%), Positives = 161/388 (41%), Gaps = 26/388 (6%)

Query: 78  DYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGM 137
           D F ++Q  D     V ++ G+              G     +T+ + +  Y R  ++  
Sbjct: 320 DKFCEMQMIDKAEEWVKKMVGK--------------GIAPSVETYNILIDGYGRLCVFSR 365

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALC 193
             +  +EM   G  PN  +   +++ L K G++     VL++      LPN   +N+ + 
Sbjct: 366 CFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLID 425

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
             C +  +         M + G    +  +  L+   CKMG++ EA ++  L+ + G   
Sbjct: 426 GSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCP 485

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
            V  +  LI G+           L+E M + G  P + T+  LI G  +  +      F 
Sbjct: 486 DVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKETLFN 545

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           +ML+    +PD V +N +I C  + G    A  +   ++++ + PD+ T+ SL+      
Sbjct: 546 EMLQM-NLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKE 604

Query: 374 GRFSLLPKLV-----CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
           G+ S    LV      GL  EAD   Y+ L+   C     N A   Y  ML+ GF P+  
Sbjct: 605 GKLSETKDLVDDMKAKGLIPEAD--TYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVC 662

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMN 456
               L  GL    ++ EA ++   ++ N
Sbjct: 663 ICNELSTGLRKDGRLQEAQSICSEMIAN 690



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/303 (21%), Positives = 123/303 (40%), Gaps = 33/303 (10%)

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           E+KM S      D +  EG  P   +  ++++ L +   +D+ LD++  ++ L   PD  
Sbjct: 8   ESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDK- 66

Query: 362 TFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
                                          +VY   +    K G    A++L+ TM  +
Sbjct: 67  -------------------------------LVYGRAMLAAVKLGDLKLAMELFETMKRR 95

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
              P+ + +  L+ GLC  ++I +A  ++  + + N   N      ++D   +AG    A
Sbjct: 96  KVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVA 155

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
           I L  R   EK    ++++   + GL +  R EEA  + +++K     P+ +TY ++   
Sbjct: 156 IGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDG 215

Query: 542 FCK-ERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
             K +        L ++ I   +++D +T   L   + K      A   L  +   GL+P
Sbjct: 216 LLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVP 275

Query: 601 DEM 603
            E+
Sbjct: 276 GEV 278



 Score = 43.1 bits (100), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 60/148 (40%), Gaps = 4/148 (2%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           F+EM +   +P+    N ++    + G V     + KE       P+  ++N  +    K
Sbjct: 544 FNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLK 603

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              +S  KD++  M  KG  P    + +L+   C +     AY     M+  G   +V  
Sbjct: 604 EGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCI 663

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
              L  G R+  RL  A  +  +M+ NG
Sbjct: 664 CNELSTGLRKDGRLQEAQSICSEMIANG 691


>gi|255546727|ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546418|gb|EEF47918.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 809

 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 119/535 (22%), Positives = 233/535 (43%), Gaps = 55/535 (10%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE- 179
           T+ + ++ + R       ++ F +M   G TPN+F+    ++ L   GR DLG KVL++ 
Sbjct: 221 TYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDV 280

Query: 180 --TQLP-NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
              ++P +  ++ + +   C    +   + ++  M ++GF P+V ++  L++ +C +G +
Sbjct: 281 INAKIPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNL 340

Query: 237 AEAYQLLGLMITLGTSLSV-----------------------------------NAWTVL 261
            +A  L   M++ G   +                                      + V+
Sbjct: 341 LKALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVV 400

Query: 262 IDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH 321
           +D   +L +++ A  L  +M      P+++ YT++I G+        A +    ++  GH
Sbjct: 401 MDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGH 460

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPK 381
            PD+V +NVL    S+ G   +AL + + +    + PD+ T   ++  +C+ G+      
Sbjct: 461 KPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQA 520

Query: 382 LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
               LE E  L  Y+A+++ +C+A   N+A  L   +  +G      SF  LL  LC   
Sbjct: 521 FFDNLE-EKCLENYSAMVNGYCEANHVNKAFALLIRLSKQGRILKKASFFKLLGNLCSEG 579

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYT 501
             ++A+ + + +V  N      +++ ++  L +AG   KA  +F   +      DV++YT
Sbjct: 580 DSEKALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYT 639

Query: 502 VAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK---------------ER 546
           + I G     + +EA+ +   MK+  + P+  TY V+L +  K               + 
Sbjct: 640 IMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNNCSKIDLRSSSSSLDAMKSKE 699

Query: 547 NIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           N+     L  ++ D  I+ D      L     K ++   A+N   EM + GL PD
Sbjct: 700 NMMDPSALWSEMKDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAPD 754



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 119/513 (23%), Positives = 214/513 (41%), Gaps = 88/513 (17%)

Query: 136 GMVLEAFD---EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSF 188
           GM  +AFD   +    GF P   + N +M+ L +  +VD+ I + ++ +     PN  ++
Sbjct: 163 GMFDQAFDVLLQTKHCGFAPQILSCNFLMNRLVESRKVDMAIAIYRQLKAFGLNPNDYTY 222

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
            IA+   C+  +++   DV   M   G  PN   +   +   C  GR    +++L  +I 
Sbjct: 223 TIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVIN 282

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
               + V A+TV+I GF    +L  A  +  +M + G +P+V  Y +LI G+        
Sbjct: 283 AKIPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLK 342

Query: 309 AFSFLDMLESEGHAPDLVF-----------------------------------HNVLID 333
           A +  D + S+G   + V                                    +NV++D
Sbjct: 343 ALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVMD 402

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV----- 388
            L K+G  ++A+++   +   K+VPD   + +++S   L G      K+V  L +     
Sbjct: 403 ALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKG------KVVDALNIYREMK 456

Query: 389 ----EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
               + D+V YN L   F + G   +A+ L N M  +G  PD  +   ++ GLC   K+D
Sbjct: 457 DIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVD 516

Query: 445 EAI----NVYQGIVMNNPA-VNA-----HVHTA---------------------IVDRLI 473
           +A     N+ +  + N  A VN      HV+ A                     ++  L 
Sbjct: 517 DAQAFFDNLEEKCLENYSAMVNGYCEANHVNKAFALLIRLSKQGRILKKASFFKLLGNLC 576

Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
             G   KA+ L    +       ++ Y+  I  L + G  E+A  +++ +    + P+  
Sbjct: 577 SEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVI 636

Query: 534 TYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           TY +M+  +C+   +K    +L D+ +  IE D
Sbjct: 637 TYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPD 669



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 103/484 (21%), Positives = 197/484 (40%), Gaps = 90/484 (18%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLN 199
           EM + GF P+ +    ++     +G +     L  +++ +    N +  +  L  L ++ 
Sbjct: 314 EMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMG 373

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
             S V +      + G + +   + ++++  CK+G++ EA +LL  M        +  +T
Sbjct: 374 MASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYT 433

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
            +I G+    ++  A  ++ +M   G  P++VTY  L  GF    +   A S L+ +E++
Sbjct: 434 TVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQ 493

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL----------------------- 356
           G  PD V HN++I+ L   G  DDA   +D L E  L                       
Sbjct: 494 GVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNLEEKCLENYSAMVNGYCEANHVNKAFALL 553

Query: 357 --------VPDSYTFCSLLSTVCLSG----RFSLLPKLVCGLEVEADLVVYNALLSYFCK 404
                   +    +F  LL  +C  G       LL  +V  L +   +++Y+ ++    +
Sbjct: 554 IRLSKQGRILKKASFFKLLGNLCSEGDSEKALCLLETMV-ALNINPTMIMYSKVIGALFQ 612

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY-----QGI------ 453
           AG   +A  ++N ++D+G  PD  ++  ++ G C   K+ EA +V      +GI      
Sbjct: 613 AGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVIT 672

Query: 454 ---VMNN------------------------PAV------------NAHVHTAIVDRLIE 474
              ++NN                        P+             +   +T ++D+  +
Sbjct: 673 YTVLLNNCSKIDLRSSSSSLDAMKSKENMMDPSALWSEMKDMDIKPDVICYTVLIDKHCK 732

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
                 AI LF   I      D V+YT  + G    G  ++A +L+ +M +  + P+A+T
Sbjct: 733 TNNIQDAINLFNEMIDRGLAPDTVTYTALLSGYCNVGNIKKAVVLFDEMLNKGIRPDAHT 792

Query: 535 YRVM 538
             V+
Sbjct: 793 MSVL 796



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/328 (22%), Positives = 143/328 (43%), Gaps = 3/328 (0%)

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
           V++ + L+      G   +A+ +L      G +  + +   L++     R++DMA  ++ 
Sbjct: 149 VQVSDALIKVCVASGMFDQAFDVLLQTKHCGFAPQILSCNFLMNRLVESRKVDMAIAIYR 208

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
           ++   G +PN  TYT  IKGF      + A      +E  G  P+   +   I+ L   G
Sbjct: 209 QLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHG 268

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYN 396
             D    V   ++  K+  D + +  ++   C   +      ++  +E +    D+ VY 
Sbjct: 269 RSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYC 328

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
           AL+S +C  G   +A+ L++ M+ KG   +      +L+GL       E  N ++     
Sbjct: 329 ALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKM 388

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
               +   +  ++D L + G+  +A++L      +K   D+++YT  I G    G+  +A
Sbjct: 389 GIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDA 448

Query: 517 YILYSQMKHIAVPPNAYTYRVMLLSFCK 544
             +Y +MK I   P+  TY V+   F +
Sbjct: 449 LNIYREMKDIGHKPDIVTYNVLAGGFSR 476



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 81/374 (21%), Positives = 157/374 (41%), Gaps = 19/374 (5%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           L G+      I  E+  +G      T+ +    + R  +    L   + M   G  P+T 
Sbjct: 441 LKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTV 500

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG 215
             N++++ L   G+VD         +     +++  +   C+ N V+    ++  + ++G
Sbjct: 501 THNMIIEGLCIGGKVDDAQAFFDNLEEKCLENYSAMVNGYCEANHVNKAFALLIRLSKQG 560

Query: 216 FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAG 275
                  F  LL   C  G   +A  LL  M+ L  + ++  ++ +I    +   ++ A 
Sbjct: 561 RILKKASFFKLLGNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQ 620

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
           Y++  +V  G +P+V+TYT +I G+        A+  L  +++ G  PD++ + VL++  
Sbjct: 621 YVFNMLVDRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNNC 680

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVY 395
           SK+    D       L  +K   +     +L S +       + P ++C          Y
Sbjct: 681 SKI----DLRSSSSSLDAMKSKENMMDPSALWSEM---KDMDIKPDVIC----------Y 723

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
             L+   CK      A+ L+N M+D+G  PD  ++  LL G C    I +A+ ++  ++ 
Sbjct: 724 TVLIDKHCKTNNIQDAINLFNEMIDRGLAPDTVTYTALLSGYCNVGNIKKAVVLFDEML- 782

Query: 456 NNPAVNAHVHTAIV 469
            N  +    HT  V
Sbjct: 783 -NKGIRPDAHTMSV 795



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/324 (21%), Positives = 149/324 (45%), Gaps = 31/324 (9%)

Query: 307 SIAFSFLDMLESEGHAPD----------LVF-------HNVLIDCLSKMGSYD-DALDVY 348
           S+AFS+ + L+  G++ D          L F        ++L++ + K G+ D   ++++
Sbjct: 74  SLAFSYFNQLKESGYSHDPYTYAAIVRILCFWGWSRKLDSILMEIIKKDGNLDFGIVNLF 133

Query: 349 DGLLELKLVPDSYTFCSLLS----TVCL-SGRFS-----LLPKLVCGLEVEADLVVYNAL 398
           + L +  +  +S++    +S     VC+ SG F      LL    CG   +  ++  N L
Sbjct: 134 EALGD-GIANESFSVLVQVSDALIKVCVASGMFDQAFDVLLQTKHCGFAPQ--ILSCNFL 190

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           ++   ++   + A+ +Y  +   G  P++Y++   ++G C    + EAI+V++ +  +  
Sbjct: 191 MNRLVESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGV 250

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
             N+  +T  ++ L   GR     ++ +  I  K P+DV +YTV IRG     + +EA  
Sbjct: 251 TPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAES 310

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
           +  +M+     P+ Y Y  ++  +C   N+     L  +++   ++ +      + + + 
Sbjct: 311 ILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLS 370

Query: 579 KFHSSSSAVNQLVEMCNLGLIPDE 602
           +   +S   NQ  E   +G+  DE
Sbjct: 371 QMGMASEVANQFKEFKKMGIFFDE 394


>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 163/352 (46%), Gaps = 38/352 (10%)

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           G+ PNV +F IL++ FCK+G +  A  +                                
Sbjct: 221 GYPPNVYLFNILMHGFCKIGDVMNARMV-------------------------------- 248

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
              ++++ + G  P+VV++ +LI G+  +K     F    ++ESE  +PD+  ++ LI+ 
Sbjct: 249 ---FDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALING 305

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPK---LVCGLEVEAD 391
           L K    ++A  ++D + E+ LVP+  TF +L+   C  G+  L  +   ++    +  D
Sbjct: 306 LCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPD 365

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
           L+ YNAL++  C+ G   +A KL N M+  GF PD  +F  L+ G C    +D A+ +  
Sbjct: 366 LITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKD 425

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
            +V     ++    TA++  L   GR   A ++ +  +   +  D  +YT+ I    + G
Sbjct: 426 RMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKG 485

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
             +    L  +M+     P   TY  ++  FCK+  +K  K LL  +++  +
Sbjct: 486 DVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEV 537



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/372 (23%), Positives = 171/372 (45%), Gaps = 32/372 (8%)

Query: 174 IKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKM 233
           ++VL     PN   FNI +   CK+ DV N + V   + R+G  P+V  F  L++ +C+ 
Sbjct: 215 LEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRS 274

Query: 234 GRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTY 293
             + E + L  +M +   S  V  ++ LI+G  +  R++ A  L+++M + G  PN VT+
Sbjct: 275 KNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTF 334

Query: 294 TSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE 353
           T+LI G  +     +A    ++++  G  PDL+ +N LI+ L + G   +A  + + ++ 
Sbjct: 335 TTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIG 394

Query: 354 LKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVK 413
               PD  TF +L+                                   CK G  + A++
Sbjct: 395 NGFKPDKITFTTLMDGC--------------------------------CKDGDMDSALE 422

Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
           + + M+++G   D+ +F  L+ GLC   ++ +A  + + ++      +   +T ++D   
Sbjct: 423 IKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFC 482

Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
           + G      +L +    +     VV+Y   + G  + G+ + A +L   M ++ V PN  
Sbjct: 483 KKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDI 542

Query: 534 TYRVMLLSFCKE 545
           T+ ++L   CK 
Sbjct: 543 TFNILLDGHCKH 554



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 88/330 (26%), Positives = 144/330 (43%), Gaps = 7/330 (2%)

Query: 124 LFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ-- 181
           L  R+    +  G   E + E+  +G+ PN +  NI+M    KIG V     V  E    
Sbjct: 196 LLRRVMKLNQQPGHCWEFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRR 255

Query: 182 --LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEA 239
              P+ +SFN  +   C+  +V     +  +M  +   P+V  +  L+N  CK  R+ EA
Sbjct: 256 GLRPSVVSFNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEA 315

Query: 240 YQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG 299
             L   M  +G   +   +T LIDG  +  ++D+A   +E M   G  P+++TY +LI G
Sbjct: 316 NGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALING 375

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
                    A   L+ +   G  PD +    L+D   K G  D AL++ D ++E  +  D
Sbjct: 376 LCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELD 435

Query: 360 SYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYN 416
              F +L+S +C  GR     +++  +     + D   Y  ++  FCK G      KL  
Sbjct: 436 DVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLK 495

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
            M   G  P   ++  L+ G C   ++  A
Sbjct: 496 EMQRDGRVPGVVTYNALMNGFCKQGQMKNA 525



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 116/237 (48%), Gaps = 4/237 (1%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIK---VLKETQL-PNFLSFNIALCNLCK 197
           FDEM   G  PN      ++D   K G++DL ++   ++K+  + P+ +++N  +  LC+
Sbjct: 319 FDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCR 378

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
             D+   + ++  M+  GF P+   F  L++  CK G +  A ++   M+  G  L   A
Sbjct: 379 DGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVA 438

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T LI G  R  R+  A  + + M+  G  P+  TYT +I  F +     +    L  ++
Sbjct: 439 FTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQ 498

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            +G  P +V +N L++   K G   +A  +   +L +++VP+  TF  LL   C  G
Sbjct: 499 RDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHG 555



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/177 (21%), Positives = 84/177 (47%)

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            ++ ++N L+  FCK G    A  +++ +  +G  P   SF  L+ G C ++ ++E   +
Sbjct: 224 PNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVL 283

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
              +     + +   ++A+++ L +  R  +A  LF          + V++T  I G  +
Sbjct: 284 KSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCK 343

Query: 510 GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
            G+ + A   +  MK   + P+  TY  ++   C++ ++K  ++LL ++I    + D
Sbjct: 344 HGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPD 400



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 83/201 (41%), Gaps = 10/201 (4%)

Query: 408 PNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN--PAV---NA 462
           P    + Y  +LD G+ P+ Y F  L+ G C    +  A  V+  I      P+V   N 
Sbjct: 207 PGHCWEFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNT 266

Query: 463 HVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQ 522
            +      + +E G   K++        E+   DV +Y+  I GL +  R EEA  L+ +
Sbjct: 267 LISGYCRSKNVEEGFVLKSVME-----SERISPDVFTYSALINGLCKESRVEEANGLFDE 321

Query: 523 MKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHS 582
           M  + + PN  T+  ++   CK   I +  R  + + D  I  D  T   L   + +   
Sbjct: 322 MCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGD 381

Query: 583 SSSAVNQLVEMCNLGLIPDEM 603
              A   L EM   G  PD++
Sbjct: 382 LKEARKLLNEMIGNGFKPDKI 402


>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
 gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
          Length = 813

 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 102/462 (22%), Positives = 210/462 (45%), Gaps = 16/462 (3%)

Query: 104 RGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDV 163
           RGI  +L+   CV+ A   L   R   + E          +M   G  P+ +  N ++  
Sbjct: 245 RGISPDLSTYNCVVNA---LCKARAMDKAEAI------LRQMVDKGVLPDNWTYNSLIYG 295

Query: 164 LFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN 219
               G+    ++V K+      LP+ ++ N  + +LCK   + + +DV   M  KG   +
Sbjct: 296 YSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTD 355

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
           +  ++I+LN +   G + +  +L  LM++ G +   + + VLI  + +   LD A  ++ 
Sbjct: 356 IFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFN 415

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
           +M + G  P+VVTY+++I           A    + +  +G AP +  ++ LI      G
Sbjct: 416 EMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHG 475

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYN 396
               A D+   ++   + PD   F  +++ +C  GR      +      + +  +++VYN
Sbjct: 476 DLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYN 535

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            L+  +C  G    A+++++ M+  G  P+   +  L+ G C   +IDE +++++ I+  
Sbjct: 536 TLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHK 595

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
               +  ++  I+  L +AGR   A   F         +D  +Y++ + GL +   ++EA
Sbjct: 596 GIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEA 655

Query: 517 YILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
            +L+ ++  + V  +  T  +M+    + R ++  K L   +
Sbjct: 656 ILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASI 697



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 108/496 (21%), Positives = 214/496 (43%), Gaps = 9/496 (1%)

Query: 101 ETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFT--PNTFARN 158
           E +  ++  +  +GCV    ++ + L+        G   E    M   G    PN  A N
Sbjct: 161 EALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYN 220

Query: 159 IVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
            V+D  FK G V    DL  ++++    P+  ++N  +  LCK   +   + ++  MV K
Sbjct: 221 TVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDK 280

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           G  P+   +  L+  +   G+  EA ++   M + G    V     L+    +  ++  A
Sbjct: 281 GVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDA 340

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             +++ M   G   ++ +Y  ++ G+             +++ S+G APD    NVLI  
Sbjct: 341 RDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKA 400

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS-LLPKLVCGLE--VEAD 391
            +K G  D A  +++ + E  + PD  T+ ++++ +C  G+    + K    ++  V   
Sbjct: 401 YAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPS 460

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
           +  Y+ L+  FC  G   +A  L   M++KG  PD   F  ++  LC   ++ +A N++ 
Sbjct: 461 ISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFD 520

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
             +      N  V+  ++D     G+   A+++F   +      +VV Y   + G  + G
Sbjct: 521 FTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVG 580

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSI 571
           R +E   L+ ++ H  + P+   Y ++L    +       K    ++ ++ I +D +T  
Sbjct: 581 RIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYS 640

Query: 572 RLTKFIFKFHSSSSAV 587
            +   +FK   S  A+
Sbjct: 641 IVLGGLFKNSCSDEAI 656



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 90/432 (20%), Positives = 185/432 (42%), Gaps = 21/432 (4%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG 173
           G    +  F + ++ Y +  M       F+EM   G  P+    + V+  L +IG++D  
Sbjct: 386 GIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDA 445

Query: 174 I----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
           +    +++ +   P+  +++  +   C   D+   KD++  M+ KG  P++  F  ++N 
Sbjct: 446 VEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINN 505

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
            CK+GR+ +A  +    I++G   +V  +  L+DG+  + +++ A  +++ MV  G  PN
Sbjct: 506 LCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPN 565

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
           VV Y +L+ G+ +        S    +  +G  P    +N+++  L + G    A   + 
Sbjct: 566 VVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFH 625

Query: 350 GLLELKLVPDSYTFCSLLSTV---CLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAG 406
            + E  +  D YT+  +L  +     S    LL K +  + V+ D+   N +++   +  
Sbjct: 626 EMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIR 685

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV---NAH 463
              +A  L+ ++   G  P   ++  ++  L     ++EA +++    M N      N+ 
Sbjct: 686 RVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSS--MENAGCEQPNSQ 743

Query: 464 VHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM 523
           +   +V  L+E     +A     +     + LD  + T+ I      G   E        
Sbjct: 744 LLNHVVRELLEKREIVRAGTYLSKIDERSFSLDHSTTTLLIDLFSSKGTCRE-------- 795

Query: 524 KHIAVPPNAYTY 535
            HI   P  Y +
Sbjct: 796 -HIRFLPAKYHF 806



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 77/387 (19%), Positives = 159/387 (41%), Gaps = 37/387 (9%)

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA-GY 276
           P +  + IL++C  +  R        G ++  G  +     + L+ G    +R   A   
Sbjct: 106 PTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALDI 165

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA---PDLVFHNVLID 333
           L  +M   GC P+V +Y  ++K     +    A   L M+ +EG A   P+ V +N +ID
Sbjct: 166 LLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMM-AEGGAVCLPNAVAYNTVID 224

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLV 393
              K G  + A D+++ +++  + PD                                L 
Sbjct: 225 GFFKEGDVNKACDLFNEMVQRGISPD--------------------------------LS 252

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            YN +++  CKA   ++A  +   M+DKG  PDN+++  L+ G     +  EA+ V + +
Sbjct: 253 TYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKM 312

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
                  +     +++  L + G+   A  +F    ++    D+ SY + + G    G  
Sbjct: 313 TSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCL 372

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
            +   L++ M    + P+++ + V++ ++ K   +     +  ++ +  +E D  T   +
Sbjct: 373 VDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTV 432

Query: 574 TKFIFKFHSSSSAVNQLVEMCNLGLIP 600
              + +      AV +  +M + G+ P
Sbjct: 433 IAALCRIGKMDDAVEKFNQMIDQGVAP 459



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/321 (22%), Positives = 143/321 (44%), Gaps = 6/321 (1%)

Query: 287 SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALD 346
           SP + TY  L+     A    +  +F   +   G   D +  + L+  L +     +ALD
Sbjct: 105 SPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALD 164

Query: 347 VY-DGLLELKLVPDSYTFCSLLSTVC---LSGRFSLLPKLVC--GLEVEADLVVYNALLS 400
           +    +  L  VPD +++C +L ++C    SG+   L +++   G     + V YN ++ 
Sbjct: 165 ILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVID 224

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
            F K G  N+A  L+N M+ +G +PD  ++  ++  LC AR +D+A  + + +V      
Sbjct: 225 GFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLP 284

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
           +   + +++      G+  +A+++ ++   +    DVV+    +  L + G+ ++A  ++
Sbjct: 285 DNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVF 344

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKF 580
             M       + ++Y++ML  +  +  +  +  L   ++   I  D H    L K   K 
Sbjct: 345 DSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKC 404

Query: 581 HSSSSAVNQLVEMCNLGLIPD 601
                A     EM   G+ PD
Sbjct: 405 GMLDRATIIFNEMREQGVEPD 425


>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
 gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
           [Arabidopsis thaliana]
 gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 606

 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 100/406 (24%), Positives = 182/406 (44%), Gaps = 43/406 (10%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
           + EM R    PN F  N+V++ L K G+++    V+++ ++    PN +S+N  +   CK
Sbjct: 211 YKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCK 270

Query: 198 LN---DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           L     +     V+  MV     PN+  F IL++ F K   +  + ++   M+      +
Sbjct: 271 LGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPN 330

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           V ++  LI+G     ++  A  + +KMV  G  PN++TY +LI GF +  M   A     
Sbjct: 331 VISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFG 390

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            ++ +G  P    +N+LID   K+G  DD   + + +    +VPD  T+  L++ +C +G
Sbjct: 391 SVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNG 450

Query: 375 RFSLLPKLVCGLEVEA--DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
                 KL   L  +   DLV ++ L+  +C+ G   +A  L   M   G  P + ++  
Sbjct: 451 NIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNI 510

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           +++G C    +  A N+                                ++  RR     
Sbjct: 511 VMKGYCKEGNLKAATNM-----------------------------RTQMEKERR----- 536

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
             ++V SY V ++G  + G+ E+A +L ++M    + PN  TY ++
Sbjct: 537 LRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/473 (21%), Positives = 205/473 (43%), Gaps = 62/473 (13%)

Query: 169 RVDLGIKVLKETQLPNF----LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFE 224
           R +LG +  K +    +    LS    +  L K N  ++V+ V   M+R+   PNV  F 
Sbjct: 168 RFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFN 227

Query: 225 ILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRL---RRLDMAGYLWEKM 281
           +++N  CK G++ +A  ++  M   G S +V ++  LIDG+ +L    ++  A  + ++M
Sbjct: 228 VVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEM 287

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
           V+N  SPN+ T+  LI GF +      +      +  +   P+++ +N LI+ L   G  
Sbjct: 288 VENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKI 347

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSY 401
            +A+ + D ++   + P                                +L+ YNAL++ 
Sbjct: 348 SEAISMRDKMVSAGVQP--------------------------------NLITYNALING 375

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVN 461
           FCK     +A+ ++ ++  +G  P    +  L+   C   KID+   + + +       +
Sbjct: 376 FCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPD 435

Query: 462 AHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYS 521
              +  ++  L   G    A +LF +   +  P D+V++ + + G    G + +A +L  
Sbjct: 436 VGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLK 494

Query: 522 QMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLT----KFI 577
           +M  + + P   TY +++  +CKE N+K    +       R +++    +R+       +
Sbjct: 495 EMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNM-------RTQMEKERRLRMNVASYNVL 547

Query: 578 FKFHSSSSAVNQ----LVEMCNLGLIPDEMWRKLGLLSDETMTPVSLFDGFVP 626
            + +S    +      L EM   GL+P+        ++ E +    +  GFVP
Sbjct: 548 LQGYSQKGKLEDANMLLNEMLEKGLVPNR-------ITYEIVKEEMVDQGFVP 593



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 86/371 (23%), Positives = 149/371 (40%), Gaps = 47/371 (12%)

Query: 75  KQRDYFHDVQ---------SFDHMISVVTRL--TGRFETVRGIVGELARVGCVIKAQTFL 123
           K RD   D++         S++ +I    +L   G+      ++ E+          TF 
Sbjct: 241 KARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFN 300

Query: 124 LFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP 183
           + +  +W+ +     ++ F EM                        +D  +K       P
Sbjct: 301 ILIDGFWKDDNLPGSMKVFKEM------------------------LDQDVK-------P 329

Query: 184 NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
           N +S+N  +  LC    +S    +   MV  G  PN+  +  L+N FCK   + EA  + 
Sbjct: 330 NVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMF 389

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
           G +   G   +   + +LID + +L ++D    L E+M + G  P+V TY  LI G    
Sbjct: 390 GSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN 449

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
                A    D L S+G  PDLV  ++L++   + G    A  +   + ++ L P   T+
Sbjct: 450 GNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTY 508

Query: 364 CSLLSTVCLSGRFSLLPKLVCGLEVE----ADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
             ++   C  G       +   +E E     ++  YN LL  + + G    A  L N ML
Sbjct: 509 NIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEML 568

Query: 420 DKGFTPDNYSF 430
           +KG  P+  ++
Sbjct: 569 EKGLVPNRITY 579



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 52/269 (19%), Positives = 120/269 (44%), Gaps = 7/269 (2%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
            +D   +V S++ +I+ +    G+      +  ++   G      T+   +  + + +M 
Sbjct: 324 DQDVKPNVISYNSLINGLCN-GGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDML 382

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIA 191
              L+ F  +   G  P T   N+++D   K+G++D G  + +E +    +P+  ++N  
Sbjct: 383 KEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCL 442

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           +  LC+  ++   K +   +  KG  P++  F IL+  +C+ G   +A  LL  M  +G 
Sbjct: 443 IAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGL 501

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKM-VQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
                 + +++ G+ +   L  A  +  +M  +     NV +Y  L++G+ +      A 
Sbjct: 502 KPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDAN 561

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
             L+ +  +G  P+ + + ++ + +   G
Sbjct: 562 MLLNEMLEKGLVPNRITYEIVKEEMVDQG 590



 Score = 40.8 bits (94), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 31/143 (21%), Positives = 60/143 (41%), Gaps = 17/143 (11%)

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAH-------------VHTAIVDRLIEA---- 475
           LL  L  A++  +  +   G V N      H             V++ I D L+ A    
Sbjct: 107 LLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANN 166

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
            R     + F+R+    Y L  +S    +  LL+  R+ +   +Y +M    + PN +T+
Sbjct: 167 SRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTF 226

Query: 536 RVMLLSFCKERNIKMVKRLLQDV 558
            V++ + CK   +   + +++D+
Sbjct: 227 NVVINALCKTGKMNKARDVMEDM 249


>gi|125573832|gb|EAZ15116.1| hypothetical protein OsJ_30529 [Oryza sativa Japonica Group]
          Length = 906

 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 105/431 (24%), Positives = 200/431 (46%), Gaps = 22/431 (5%)

Query: 148 FGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSN 203
           +G  P+    NIV+  L +  R+D    ++   Q     P+  + +I +   CK+ ++ +
Sbjct: 404 YGCEPSVLTYNIVIKCLCEQNRMDDARALITIMQSRGVRPDMSTNSIMVTAYCKIGEIES 463

Query: 204 VKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLID 263
              + G M + G  P++ +++ ++ C C+M R+ EA   L  MI  G +     +T LI+
Sbjct: 464 ALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRRLKEAEATLRQMIREGLAPDEIIYTSLIN 523

Query: 264 GFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP 323
           G+   R+      ++++M++ G  P    Y SLI G ++      A  +L+ +  EG AP
Sbjct: 524 GYSLTRQTRNVCRIFDEMLKRGLQPGPHAYGSLINGLVKGNKIRKALGYLERMLEEGIAP 583

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS-GRFSLLPKL 382
             V + +LI+   + G     LD+   +++  + PD  T+ +L++ +C +  R  + P L
Sbjct: 584 QTVIYTMLINQFFRKGDVRLGLDLVVLMMKTNVAPDLITYGALVTGICRNIARRGMRPSL 643

Query: 383 VCGLEVEADLVVYNALL------------SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
              L+ EA  +++  L             +  C       A  +   + + G  PD + +
Sbjct: 644 AKKLK-EARYMLFRMLPQIIDTRNGKQKDNQICTEEMIQVAQGIIQDLEENGMVPDLHIY 702

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAV--NAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
            G++ GLC A K+D+A ++    VM+   +  N   +T +++  I  G  + AIQLF   
Sbjct: 703 NGMINGLCRANKMDDAYSLLS--VMDQTGILPNHVTYTILMNNQIRLGDINHAIQLFNSL 760

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
             +    D ++Y   I+GL   GR +EA      M      P+  +Y  ++     E  I
Sbjct: 761 NSDGCVFDKITYNTFIKGLSLAGRMKEALSFLLMMHKRGFVPSKASYDKLMELLLAENAI 820

Query: 549 KMVKRLLQDVI 559
            +V +L +D++
Sbjct: 821 DIVLQLFEDML 831



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 108/547 (19%), Positives = 222/547 (40%), Gaps = 72/547 (13%)

Query: 125 FLRIYWRGEMYGMVLEAFDEM-GRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ-- 181
            +R++ R       L+ F  M G      + +A   ++  LF+ GRVD G+++  E    
Sbjct: 193 LIRVFCREGRLEPALDVFRRMKGDEHVQLDAYAYTTMIWGLFEHGRVDHGLQMYHEMIDR 252

Query: 182 --LPNFLSFNIALCNLCKLNDVSNVKDV------------IGMMVRKGFYPNVRMFEIL- 226
              P+  ++N+ +   CK   V    D+               M+  G +P+  MF  + 
Sbjct: 253 GIQPDAATYNVMIRWYCKSKWVGAAMDIYKDGKLGEAENLFDKMLESGLFPDHVMFISIA 312

Query: 227 ---------------------LNCFCKMGRIA-------------EAYQLLGLMITLGTS 252
                                L+C  K+  ++             EA  LL  ++T    
Sbjct: 313 RFFPKGWVVLFVRKALKAVAKLDCGAKLLELSSLAGGCSNMSLQKEADHLLDEIVT-SNV 371

Query: 253 LSVN-AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
           L VN    ++I       RLD++ YL  K+V  GC P+V+TY  +IK   E      A +
Sbjct: 372 LPVNIVLNLMIIAMCSEGRLDVSYYLLGKLVAYGCEPSVLTYNIVIKCLCEQNRMDDARA 431

Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
            + +++S G  PD+  +++++    K+G  + AL ++  + +  + P    + S++  +C
Sbjct: 432 LITIMQSRGVRPDMSTNSIMVTAYCKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVCLC 491

Query: 372 LSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
              R       +  +  E    D ++Y +L++ +          ++++ ML +G  P  +
Sbjct: 492 RMRRLKEAEATLRQMIREGLAPDEIIYTSLINGYSLTRQTRNVCRIFDEMLKRGLQPGPH 551

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
           ++  L+ GL    KI +A+   + ++    A    ++T ++++    G     + L    
Sbjct: 552 AYGSLINGLVKGNKIRKALGYLERMLEEGIAPQTVIYTMLINQFFRKGDVRLGLDLVVLM 611

Query: 489 IVEKYPLDVVSY---------TVAIRGL---LEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
           +      D+++Y          +A RG+   L     E  Y+L+  +  I    N     
Sbjct: 612 MKTNVAPDLITYGALVTGICRNIARRGMRPSLAKKLKEARYMLFRMLPQIIDTRNGKQKD 671

Query: 537 VMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNL 596
             +   C E  I++ + ++QD+ +  +  D H    +   + + +    A + L  M   
Sbjct: 672 NQI---CTEEMIQVAQGIIQDLEENGMVPDLHIYNGMINGLCRANKMDDAYSLLSVMDQT 728

Query: 597 GLIPDEM 603
           G++P+ +
Sbjct: 729 GILPNHV 735



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 113/240 (47%), Gaps = 4/240 (1%)

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC-LSGRFSLLP 380
           APD    + L+ C S++G    AL  +  L++    P   +  +LL  +C  S     + 
Sbjct: 44  APDPAVSDALVACHSRLGDISSALSHFHRLVQSGAAPSPASTAALLRAMCSASMSTEAMD 103

Query: 381 KLVCGLEVEADLVV--YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
            LV  +   + L V  +  L+   C  G  ++A  L++ ML  G TP    +  L    C
Sbjct: 104 VLVLSMGNPSPLPVSDFALLIPGLCSEGAVDKARFLFDAMLRSGLTPPVRVYRSLAFAYC 163

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY-PLDV 497
            AR+  +A ++ Q +++    ++  + TA++      GR   A+ +FRR   +++  LD 
Sbjct: 164 KARRSLDASDMCQLMLIKGMYLDRELSTALIRVFCREGRLEPALDVFRRMKGDEHVQLDA 223

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
            +YT  I GL E GR +    +Y +M    + P+A TY VM+  +CK + +     + +D
Sbjct: 224 YAYTTMIWGLFEHGRVDHGLQMYHEMIDRGIQPDAATYNVMIRWYCKSKWVGAAMDIYKD 283



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 99/434 (22%), Positives = 167/434 (38%), Gaps = 55/434 (12%)

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           F + +  LC    V   + +   M+R G  P VR++  L   +CK  R  +A  +  LM+
Sbjct: 120 FALLIPGLCSEGAVDKARFLFDAMLRSGLTPPVRVYRSLAFAYCKARRSLDASDMCQLML 179

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG-CSPNVVTYTSLIKGFMEAKMF 306
             G  L     T LI  F R  RL+ A  ++ +M  +     +   YT++I G  E    
Sbjct: 180 IKGMYLDRELSTALIRVFCREGRLEPALDVFRRMKGDEHVQLDAYAYTTMIWGLFEHGRV 239

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLID--CLSKM----------GSYDDALDVYDGLLEL 354
                    +   G  PD   +NV+I   C SK           G   +A +++D +LE 
Sbjct: 240 DHGLQMYHEMIDRGIQPDAATYNVMIRWYCKSKWVGAAMDIYKDGKLGEAENLFDKMLES 299

Query: 355 KLVPDSYTFCSLL-----STVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPN 409
            L PD   F S+        V L  R +L  K V  L+  A L+  ++L           
Sbjct: 300 GLFPDHVMFISIARFFPKGWVVLFVRKAL--KAVAKLDCGAKLLELSSLAGGCSNMSLQK 357

Query: 410 QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
           +A  L + ++     P N     ++  +C   ++D                   V   ++
Sbjct: 358 EADHLLDEIVTSNVLPVNIVLNLMIIAMCSEGRLD-------------------VSYYLL 398

Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
            +L+  G C  +               V++Y + I+ L E  R ++A  L + M+   V 
Sbjct: 399 GKLVAYG-CEPS---------------VLTYNIVIKCLCEQNRMDDARALITIMQSRGVR 442

Query: 530 PNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQ 589
           P+  T  +M+ ++CK   I+    L  ++    IE        +   + +      A   
Sbjct: 443 PDMSTNSIMVTAYCKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRRLKEAEAT 502

Query: 590 LVEMCNLGLIPDEM 603
           L +M   GL PDE+
Sbjct: 503 LRQMIREGLAPDEI 516



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 87/450 (19%), Positives = 177/450 (39%), Gaps = 53/450 (11%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWR-GEMYGMVLEAFDEMGRFGFTPNTFAR 157
           R +  R ++  +   G      T  + +  Y + GE+    L  F EM + G  P+    
Sbjct: 425 RMDDARALITIMQSRGVRPDMSTNSIMVTAYCKIGEIES-ALHLFGEMAKDGIEPSIAVY 483

Query: 158 NIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           + ++  L ++ R+        ++++E   P+ + +   +          NV  +   M++
Sbjct: 484 DSIIVCLCRMRRLKEAEATLRQMIREGLAPDEIIYTSLINGYSLTRQTRNVCRIFDEMLK 543

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +G  P    +  L+N   K  +I +A   L  M+  G +     +T+LI+ F R   + +
Sbjct: 544 RGLQPGPHAYGSLINGLVKGNKIRKALGYLERMLEEGIAPQTVIYTMLINQFFRKGDVRL 603

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKG-----------------FMEAK------------ 304
              L   M++   +P+++TY +L+ G                   EA+            
Sbjct: 604 GLDLVVLMMKTNVAPDLITYGALVTGICRNIARRGMRPSLAKKLKEARYMLFRMLPQIID 663

Query: 305 ---------------MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
                          M  +A   +  LE  G  PDL  +N +I+ L +    DDA  +  
Sbjct: 664 TRNGKQKDNQICTEEMIQVAQGIIQDLEENGMVPDLHIYNGMINGLCRANKMDDAYSLLS 723

Query: 350 GLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAG 406
            + +  ++P+  T+  L++     G  +   +L   L  +    D + YN  +     AG
Sbjct: 724 VMDQTGILPNHVTYTILMNNQIRLGDINHAIQLFNSLNSDGCVFDKITYNTFIKGLSLAG 783

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
              +A+     M  +GF P   S+  L+  L     ID  + +++ ++          +T
Sbjct: 784 RMKEALSFLLMMHKRGFVPSKASYDKLMELLLAENAIDIVLQLFEDMLFQGYTPRYANYT 843

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
           +++  L + GR  +A ++F   + ++  LD
Sbjct: 844 SLLLVLAKDGRWSEADRIFTMMLKKRKYLD 873


>gi|302761606|ref|XP_002964225.1| hypothetical protein SELMODRAFT_81759 [Selaginella moellendorffii]
 gi|300167954|gb|EFJ34558.1| hypothetical protein SELMODRAFT_81759 [Selaginella moellendorffii]
          Length = 580

 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 120/535 (22%), Positives = 225/535 (42%), Gaps = 41/535 (7%)

Query: 66  ALSFFIWCAKQR--DYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFL 123
           AL F+ W  KQ    Y HD + ++ ++  +     R   +  ++GE+   GC ++ +  L
Sbjct: 12  ALFFYRWAGKQNRSSYKHDSRIYNQVVRNLA-AAKRLSDIDSVLGEMMDQGCSLEPEAAL 70

Query: 124 LFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP 183
             +  Y  G M       F+E+   G        N++   L K+ R     +++++    
Sbjct: 71  DLVVCYANGAMVDRAQAIFNELRHQGQEFPAHIYNVIFGALAKLQRFQDVFRMVEDLMAK 130

Query: 184 NFLSFNIALCN-----LCKLNDVSNVKDVIGMMVRKGFYPNVRMFE--ILLNCFCKMGRI 236
           NF +F+ +  +      CK   V      +  M  KG    +  FE   L+   CK  RI
Sbjct: 131 NF-TFSDSTADALVRIFCKALAVDKAVRFLKWMSSKGLQVAMSTFEYNCLIEGLCKGDRI 189

Query: 237 AEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSL 296
            EA +L  LM        +  +  +I+   +L  ++ A  + + M ++ C P+   YT +
Sbjct: 190 DEALRLYELMRGNNVPADIFTYNNMIECISKLGMVEQAEKVLKTMEESDCKPDKFIYTRV 249

Query: 297 IKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
           I GF +   F  A   L  ++  G+APD V  + +I  L K   +D+AL V    +E   
Sbjct: 250 INGFCKLGNFKNAVVLLGRMKEAGYAPDAVVFDCIIGGLCKTSKFDEALVVLKVSIEAGC 309

Query: 357 VPDSYT----------------FCSLLSTVCLSGRFSLL--------------PKLVCGL 386
            PD  T                +  L+  +C +G+                   +L+ G 
Sbjct: 310 EPDEVTYFKLAQERKCPATNLLYSRLMKCLCKTGKVEAACQLLEDLTNGSRESEQLLGGD 369

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
             + D+V+Y+ ++   C  G  ++   +   M ++G  PD   +   L   C + ++D+A
Sbjct: 370 GCKPDVVMYSIVIDALCAMGMTDEGFVVVKAMEERGVKPDAVVYTIFLYAFCRSARLDDA 429

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
             + + +V      +   +  ++  L  AG+  +A +LF+  +      +V +YT  IR 
Sbjct: 430 CRLLEMMVEAGCYPDVISYNTLLFALCSAGQEEEACRLFQVMVETGIEPNVFTYTQLIRA 489

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
           L    + E A  L++ MK     P+  TY+ ++L   +   ++  ++LL+   DA
Sbjct: 490 LCSTKKLEGARHLFNFMKLSKCVPDMETYKALILGHYQNEGVREARQLLEQESDA 544



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 66/309 (21%), Positives = 122/309 (39%), Gaps = 34/309 (11%)

Query: 269 RRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH 328
           +RL     +  +M+  GCS        L+  +    M   A +  + L  +G       +
Sbjct: 45  KRLSDIDSVLGEMMDQGCSLEPEAALDLVVCYANGAMVDRAQAIFNELRHQGQEFPAHIY 104

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV 388
           NV+   L+K+  + D   + + L+       ++TF    ST                   
Sbjct: 105 NVIFGALAKLQRFQDVFRMVEDLM-----AKNFTFSD--STA------------------ 139

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF--TPDNYSFVGLLRGLCGARKIDEA 446
                  +AL+  FCKA   ++AV+    M  KG       + +  L+ GLC   +IDEA
Sbjct: 140 -------DALVRIFCKALAVDKAVRFLKWMSSKGLQVAMSTFEYNCLIEGLCKGDRIDEA 192

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
           + +Y+ +  NN   +   +  +++ + + G   +A ++ +         D   YT  I G
Sbjct: 193 LRLYELMRGNNVPADIFTYNNMIECISKLGMVEQAEKVLKTMEESDCKPDKFIYTRVING 252

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
             + G  + A +L  +MK     P+A  +  ++   CK         +L+  I+A  E D
Sbjct: 253 FCKLGNFKNAVVLLGRMKEAGYAPDAVVFDCIIGGLCKTSKFDEALVVLKVSIEAGCEPD 312

Query: 567 YHTSIRLTK 575
             T  +L +
Sbjct: 313 EVTYFKLAQ 321



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 72/379 (18%), Positives = 139/379 (36%), Gaps = 53/379 (13%)

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           +N  + NL     +S++  V+G M+ +G          L+ C+     +  A  +   + 
Sbjct: 34  YNQVVRNLAAAKRLSDIDSVLGEMMDQGCSLEPEAALDLVVCYANGAMVDRAQAIFNELR 93

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
             G     + + V+     +L+R      + E ++    + +  T  +L++ F +A    
Sbjct: 94  HQGQEFPAHIYNVIFGALAKLQRFQDVFRMVEDLMAKNFTFSDSTADALVRIFCKALAVD 153

Query: 308 IAFSFLDMLESEGH--APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
            A  FL  + S+G   A     +N LI+ L K    D+AL +Y+                
Sbjct: 154 KAVRFLKWMSSKGLQVAMSTFEYNCLIEGLCKGDRIDEALRLYE---------------- 197

Query: 366 LLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
                           L+ G  V AD+  YN ++    K G   QA K+  TM +    P
Sbjct: 198 ----------------LMRGNNVPADIFTYNNMIECISKLGMVEQAEKVLKTMEESDCKP 241

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           D + +  ++ G C       A+ +   +     A +A V   I+  L +  +  +A+ + 
Sbjct: 242 DKFIYTRVINGFCKLGNFKNAVVLLGRMKEAGYAPDAVVFDCIIGGLCKTSKFDEALVVL 301

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
           + +I      D V+Y                   +   +    P     Y  ++   CK 
Sbjct: 302 KVSIEAGCEPDEVTY-------------------FKLAQERKCPATNLLYSRLMKCLCKT 342

Query: 546 RNIKMVKRLLQDVIDARIE 564
             ++   +LL+D+ +   E
Sbjct: 343 GKVEAACQLLEDLTNGSRE 361



 Score = 47.0 bits (110), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 47/222 (21%), Positives = 92/222 (41%), Gaps = 10/222 (4%)

Query: 384 CGLEVEA--DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
           C LE EA  DLVV       +      ++A  ++N +  +G     + +  +   L   +
Sbjct: 62  CSLEPEAALDLVVC------YANGAMVDRAQAIFNELRHQGQEFPAHIYNVIFGALAKLQ 115

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE--KYPLDVVS 499
           +  +   + + ++  N   +     A+V    +A    KA++  +    +  +  +    
Sbjct: 116 RFQDVFRMVEDLMAKNFTFSDSTADALVRIFCKALAVDKAVRFLKWMSSKGLQVAMSTFE 175

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           Y   I GL +G R +EA  LY  M+   VP + +TY  M+    K   ++  +++L+ + 
Sbjct: 176 YNCLIEGLCKGDRIDEALRLYELMRGNNVPADIFTYNNMIECISKLGMVEQAEKVLKTME 235

Query: 560 DARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           ++  + D     R+     K  +  +AV  L  M   G  PD
Sbjct: 236 ESDCKPDKFIYTRVINGFCKLGNFKNAVVLLGRMKEAGYAPD 277


>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
          Length = 676

 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 125/485 (25%), Positives = 200/485 (41%), Gaps = 51/485 (10%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D +SF  ++    R  GRFE    ++  +   G  + + T  + +R + R   +  V + 
Sbjct: 180 DHRSFRALVLGCCR-EGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDL 238

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           F  M   G  PN    +  +D L + G V     VL+E       PN  +    +  LCK
Sbjct: 239 FRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCK 298

Query: 198 LNDVSNVKDVIGMMVRKGFY-PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
           +  +     +   +V+   Y PNV  + +++  +CK G++A A  LLG M+  G + + N
Sbjct: 299 IGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTN 358

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
            +T LI G  +    D A  L  KM   G  PN+ TY ++I GF +      A+  L M 
Sbjct: 359 TYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMA 418

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC----- 371
            S+G   D V + +LI    K G    ALD++  + E    PD +T+ ++++  C     
Sbjct: 419 TSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQM 478

Query: 372 ------------------------LSGRFSLLPKLVCGLEV---------EADLVVYNAL 398
                                   +   +  L KL   L+V           D + Y AL
Sbjct: 479 EQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGAL 538

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           +S  CK     +A  L+ TMLDK   P + + V L    C   KI  A++    +   + 
Sbjct: 539 ISSLCKESRLEEARALFETMLDKHLVPCDVTRVTLAYEYCRRDKITIAVSFLDRL---DK 595

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
              AH   A+V +L   G    A    +  + + Y +D  +YT  I    E  R    Y 
Sbjct: 596 RQQAHTADALVRKLSTVGNLDAASLFLKNVLDKHYAVDHATYTSFINSCYESNR----YA 651

Query: 519 LYSQM 523
           L S++
Sbjct: 652 LASEI 656



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/385 (23%), Positives = 175/385 (45%), Gaps = 4/385 (1%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+  SF   +   C+         ++  M  +GF  +     +++  FC+ GR      L
Sbjct: 179 PDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDL 238

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
              M  +GT  ++  ++  IDG      +  A ++ E+MV  G  PNV T+TSLI G  +
Sbjct: 239 FRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCK 298

Query: 303 AKMFSIAFS-FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
                 AF  FL +++S  + P++  + V+I    K G    A  +   ++E  L P++ 
Sbjct: 299 IGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTN 358

Query: 362 TFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           T+ +L+   C  G F    +L+  +++E    ++  YNA++  FCK G   +A K+    
Sbjct: 359 TYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMA 418

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
             +G   D  ++  L+   C    I  A+++++ +   +   + H +T I+    +  + 
Sbjct: 419 TSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQM 478

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            ++ QLF + +         +YT  I G    G+   A  ++ +M      P++ TY  +
Sbjct: 479 EQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGAL 538

Query: 539 LLSFCKERNIKMVKRLLQDVIDARI 563
           + S CKE  ++  + L + ++D  +
Sbjct: 539 ISSLCKESRLEEARALFETMLDKHL 563



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 169/371 (45%), Gaps = 22/371 (5%)

Query: 202 SNVKDVIGMMVRK--GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
           ++ ++    M R   G  P+ R F  L+   C+ GR  EA  LL  M   G  L     T
Sbjct: 161 AHAREAFDGMARAAGGVRPDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCT 220

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
           V++  F R  R      L+ +M + G  PN+V Y++ I G  E      AF  L+ +  +
Sbjct: 221 VVVRAFCRQGRFRNVTDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGK 280

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV------PDSYTFCSLLSTVCLS 373
           G  P++  H  LID L K+G  + A  ++     LKLV      P+ +T+  ++   C  
Sbjct: 281 GLKPNVYTHTSLIDGLCKIGWMERAFRLF-----LKLVKSSSYKPNVHTYTVMIGGYCKE 335

Query: 374 GRFSLLPKLVCGLEVEADLV----VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
           G+ +   +++ G  VE  L      Y  L+   CK G  ++A +L N M  +GF P+ Y+
Sbjct: 336 GKLA-RAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYT 394

Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
           +  ++ G C   KI EA  V +        ++   +T ++    + G    A+ LF++  
Sbjct: 395 YNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMA 454

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK----E 545
            +    D+ +YT  I    +  + E++  L+ +   I + P   TY  M+  +C+     
Sbjct: 455 EKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLT 514

Query: 546 RNIKMVKRLLQ 556
             +K+ +R++Q
Sbjct: 515 SALKVFERMVQ 525



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 84/376 (22%), Positives = 159/376 (42%), Gaps = 40/376 (10%)

Query: 232 KMGRIAEAYQLLGLMITLGTSLSVNA--WTVLIDGFRRLRRLDMAGYLWEKMVQ--NGCS 287
           + GR+ EA  +L  + + G  L V    W VL  G R       A   ++ M +   G  
Sbjct: 120 EAGRLREAADMLLELRSHGLPLVVETANW-VLRVGLRHPGCFAHAREAFDGMARAAGGVR 178

Query: 288 PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
           P+  ++ +L+ G      F  A + L  + ++G   D     V++    + G + +  D+
Sbjct: 179 PDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDL 238

Query: 348 YDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGF 407
           +  + E+   P+                                +V Y+A +   C+ G+
Sbjct: 239 FRRMSEMGTPPN--------------------------------MVNYSAWIDGLCERGY 266

Query: 408 PNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP-AVNAHVHT 466
             QA  +   M+ KG  P+ Y+   L+ GLC    ++ A  ++  +V ++    N H +T
Sbjct: 267 VKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYT 326

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
            ++    + G+  +A  L  R + +    +  +YT  I G  +GG  + A+ L ++MK  
Sbjct: 327 VMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLE 386

Query: 527 AVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT-SIRLTKFIFKFHSSSS 585
              PN YTY  ++  FCK+  I+   ++L+      + LD  T +I +T+   + H  + 
Sbjct: 387 GFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGH-ITC 445

Query: 586 AVNQLVEMCNLGLIPD 601
           A++   +M      PD
Sbjct: 446 ALDLFKQMAEKSCHPD 461


>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
          Length = 645

 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 109/430 (25%), Positives = 198/430 (46%), Gaps = 44/430 (10%)

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIA 191
           G++ EA     R    P   A N V+D L K  R     +L  ++L+   +P+ +++N  
Sbjct: 133 GLLDEALYVFRRLRTLPALPACNAVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYN-T 191

Query: 192 LCNLCKLND-VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
           L N C+    V+  ++V   MV +   PNV  +  ++   C+ G I +A +L   M   G
Sbjct: 192 LINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAG 251

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
              +   + VL+ G  +   ++ A  L+++++++G +PN V +T+LI GF +AK FS A 
Sbjct: 252 MQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAK 311

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
                +   G AP +  +N L+D   + G+  +AL +Y  +  L L PD +T   ++  +
Sbjct: 312 GMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGL 371

Query: 371 CLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           C  G+  +  + + G++   V  +   YNAL+  +C+ G   +A+     M + G  P+ 
Sbjct: 372 CDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNV 431

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
            S+  L+ G     K+  A+ +Y               T +V + IE             
Sbjct: 432 VSYSSLIDGHSKRGKMQIAMAIY---------------TEMVAKGIEP------------ 464

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN 547
                   +VV+YT  I G  + G  + A+ L+ +M    + PNA T  V++   C+E  
Sbjct: 465 --------NVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENR 516

Query: 548 IKMVKRLLQD 557
           ++   R + +
Sbjct: 517 VQEAVRFVME 526



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 98/382 (25%), Positives = 171/382 (44%), Gaps = 3/382 (0%)

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
           P +     +L+   K  R   A++L   M+  G   SV  +  LI+  R    +  A  +
Sbjct: 149 PALPACNAVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEV 208

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
           W++MV     PNVVTYT++I    E      A    D ++  G  P+   +NVL+    +
Sbjct: 209 WDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQ 268

Query: 338 MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVV 394
               + A+ +Y  LL+  L P++  F +L+   C + RFS    +   +    V   + V
Sbjct: 269 RDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPV 328

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           YN+L+    ++G   +A+ LY  M   G  PD ++   ++RGLC   ++  A    QG+ 
Sbjct: 329 YNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQ 388

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
            +   +NA  + A++D     G   +A+    R        +VVSY+  I G  + G+ +
Sbjct: 389 EDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQ 448

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLT 574
            A  +Y++M    + PN  TY  ++    K   I    RL +++I+  I  +  T   L 
Sbjct: 449 IAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLV 508

Query: 575 KFIFKFHSSSSAVNQLVEMCNL 596
             + + +    AV  ++E   L
Sbjct: 509 DGLCRENRVQEAVRFVMEYSGL 530



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 100/418 (23%), Positives = 192/418 (45%), Gaps = 24/418 (5%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFK---IGRVDLGIKVLKETQL-PNFLSFNIALCNL 195
           E +D+M      PN      ++  L +   IG  +     +KE  + PN  ++N+ +   
Sbjct: 207 EVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGH 266

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
           C+ +DV++   +   +++ G  PN  +F  L++ FCK  R +EA  +   M   G + +V
Sbjct: 267 CQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTV 326

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
             +  L+DG  R      A  L+++M + G  P+  T + +++G  +     +A  FL  
Sbjct: 327 PVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQG 386

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
           ++ +G   +   +N LID   ++G+ ++AL     + E+ + P+  ++ SL+      G+
Sbjct: 387 VQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGK 446

Query: 376 FSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
             +   +   +    +E ++V Y AL+    K G  + A +L+  M++ G +P+  +   
Sbjct: 447 MQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSV 506

Query: 433 LLRGLCGARKIDEAINV---YQGI-------VMNNPAV-------NAHVHTAIVDRLIEA 475
           L+ GLC   ++ EA+     Y G+       V +N  +       N+ ++  ++  L   
Sbjct: 507 LVDGLCRENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLD 566

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
           G+  +A +LF          D  +YT+ IRG    G    A +LY+ M  I V P  Y
Sbjct: 567 GQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKPTRY 624



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 84/339 (24%), Positives = 150/339 (44%), Gaps = 29/339 (8%)

Query: 109 ELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIG 168
           EL + G    A  F   +  + + + +      F EM RFG  P     N +MD  F+ G
Sbjct: 281 ELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSG 340

Query: 169 RVDLGIKVLKE-TQL---PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFE 224
                + + +E T+L   P+  + +I +  LC    +      +  +   G   N   + 
Sbjct: 341 NAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYN 400

Query: 225 ILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN 284
            L++ +C++G + EA      M  +G   +V +++ LIDG  +  ++ +A  ++ +MV  
Sbjct: 401 ALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAK 460

Query: 285 GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
           G  PNVVTYT+LI G  +      AF     +   G +P+ +  +VL+D L +     +A
Sbjct: 461 GIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEA 520

Query: 345 LDV---YDGL--LELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALL 399
           +     Y GL   ++  V  ++T    +   CL     +   L+ GL ++          
Sbjct: 521 VRFVMEYSGLKCSDIHSVFSNFT----IEEECLIPNSVIYMTLIYGLYLDGQ-------- 568

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
              C+AG      KL++ M   G  PD++++  L+RG C
Sbjct: 569 --HCEAG------KLFSYMRKSGMIPDSFTYTLLIRGQC 599



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/323 (21%), Positives = 135/323 (41%), Gaps = 46/323 (14%)

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDAL-------------------------------- 345
           S   AP L    VL+  LS+MG  D+AL                                
Sbjct: 115 STTPAPAL---GVLVIALSQMGLLDEALYVFRRLRTLPALPACNAVLDGLVKARRPGCAW 171

Query: 346 DVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYF 402
           +++D +L   LVP   T+ +L++     G  +   ++   +   +++ ++V Y  ++   
Sbjct: 172 ELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICAL 231

Query: 403 CKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNA 462
           C+ G    A +L++ M + G  P+ Y++  L+ G C    ++ A+ +YQ ++ +    NA
Sbjct: 232 CEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNA 291

Query: 463 HVHTAIVDRLIEAGRCHKAIQLF----RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
            + T ++D   +A R  +A  +F    R  +    P+    Y   + G    G  +EA  
Sbjct: 292 VIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPV----YNSLMDGAFRSGNAQEALA 347

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
           LY +M  + + P+ +T  +++   C    + +  R LQ V +  + L+      L     
Sbjct: 348 LYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYC 407

Query: 579 KFHSSSSAVNQLVEMCNLGLIPD 601
           +  +   A+     M  +G+ P+
Sbjct: 408 RIGNLEEALATCTRMTEVGIEPN 430


>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
 gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
          Length = 845

 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 124/518 (23%), Positives = 218/518 (42%), Gaps = 46/518 (8%)

Query: 91  SVVTRLTGRFETVRGI--VGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRF 148
           +V+  L  R +  R +  +  + R G    A TF   +  Y R     +  + FD+M   
Sbjct: 158 AVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLR 217

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPN---FLSFNIALCNL---------- 195
           GF  +  +   +++ L + GR+D  +++  E   P+   + +    LCN           
Sbjct: 218 GFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQPDMHMYAALVKGLCNAERGEEGLLML 277

Query: 196 ----------------------CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKM 233
                                 C+       ++++  M  KG  P V     ++N +CK 
Sbjct: 278 RRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKE 337

Query: 234 GRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTY 293
           GR+++A ++L LM   G   +V  +  L+ GF    ++  A  L  KM   G +P+ VTY
Sbjct: 338 GRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTY 397

Query: 294 TSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE 353
             LI+G         AF  L ++E +G   D   +N LI+ L K G  D A  ++D L  
Sbjct: 398 NLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLET 457

Query: 354 LKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPN 409
             + P++ TF SL++ +C SG+    +  L K+V       D   Y++ + + CK     
Sbjct: 458 RGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSA-GCTPDTYTYSSFIEHLCKMKGSQ 516

Query: 410 QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN--NPAVNAHVHTA 467
           + +     ML K   P   ++  ++  L   R        +  +V +  NP V  +  T+
Sbjct: 517 EGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYT-TS 575

Query: 468 IVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIA 527
           +    IE GR ++A  +          +D ++Y   + G    G+T+ A  +  QM  +A
Sbjct: 576 MRAYCIE-GRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVA 634

Query: 528 VPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
             PN +TY ++L    + R ++ V  L    +   IEL
Sbjct: 635 SVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIEL 672



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 105/430 (24%), Positives = 188/430 (43%), Gaps = 19/430 (4%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+  +FN  +   C+ N V   +D+   M  +GF  +V  +  L+   C+ GRI EA +L
Sbjct: 186 PDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVEL 245

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
            G M        ++ +  L+ G     R +    +  +M + G  P+   Y +++     
Sbjct: 246 FGEM----DQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCR 301

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK-LVPDSY 361
            +    A   L  +  +G AP +V    +I+   K G   DAL V + L++L+   P+ +
Sbjct: 302 ERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLE-LMKLRGCKPNVW 360

Query: 362 TFCSLLSTVCLSGR----FSLLPKL-VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYN 416
           T+ +L+   C  G+     +LL K+  CG  V  D V YN L+   C  G    A +L  
Sbjct: 361 TYNALVQGFCNEGKVHKAMTLLNKMRACG--VNPDAVTYNLLIRGQCIDGHIESAFRLLR 418

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
            M   G   D Y++  L+  LC   + D+A +++  +       NA    ++++ L ++G
Sbjct: 419 LMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSG 478

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
           +   A +   + +      D  +Y+  I  L +   ++E      +M    V P+   Y 
Sbjct: 479 KADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYT 538

Query: 537 VMLLSFCKERNIKMVKRLLQDVIDARIELD---YHTSIRLTKFIFKFHSSSSAVNQLVEM 593
           +++    KERN  +V R   +++ +    D   Y TS+R      + +    A N L+EM
Sbjct: 539 IVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLN---EAENVLMEM 595

Query: 594 CNLGLIPDEM 603
              G+  D M
Sbjct: 596 SKNGVTVDTM 605



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/381 (23%), Positives = 173/381 (45%), Gaps = 11/381 (2%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P   ++N  + +LC+  D++     + +MVR G+ P+   F  L+  +C+  ++  A  L
Sbjct: 151 PTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDL 210

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
              M   G +  V ++  LI+G     R+D A  L+ +M Q    P++  Y +L+KG   
Sbjct: 211 FDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ----PDMHMYAALVKGLCN 266

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
           A+        L  ++  G  P    +  ++D   +     +A ++   + E  L P   T
Sbjct: 267 AERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVT 326

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGLEV---EADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
             ++++  C  GR S   +++  +++   + ++  YNAL+  FC  G  ++A+ L N M 
Sbjct: 327 CTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMR 386

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
             G  PD  ++  L+RG C    I+ A  + + +  +    + + + A+++ L + GR  
Sbjct: 387 ACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTD 446

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
           +A  LF          + V++   I GL + G+ + A+    +M      P+ YTY   +
Sbjct: 447 QACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFI 506

Query: 540 LSFCK----ERNIKMVKRLLQ 556
              CK    +  +  +  +LQ
Sbjct: 507 EHLCKMKGSQEGLSFIGEMLQ 527



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 103/431 (23%), Positives = 179/431 (41%), Gaps = 24/431 (5%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNL 195
           E   EM   G  P       V++   K GR+   ++VL+  +L    PN  ++N  +   
Sbjct: 310 EMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGF 369

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
           C    V     ++  M   G  P+   + +L+   C  G I  A++LL LM   G     
Sbjct: 370 CNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQ 429

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
             +  LI+   +  R D A  L++ +   G  PN VT+ SLI G  ++    IA+ FL+ 
Sbjct: 430 YTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEK 489

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
           + S G  PD   ++  I+ L KM    + L     +L+  + P +  +  ++  +     
Sbjct: 490 MVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERN 549

Query: 376 FSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
           + L+ +    +       D+V Y   +  +C  G  N+A  +   M   G T D  ++  
Sbjct: 550 YGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNT 609

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD-----RLIE------AGRCHKA 481
           L+ G     + D A+++ + +       N   +  ++      RL+E           KA
Sbjct: 610 LMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKA 669

Query: 482 IQ------LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
           I+      LF      ++  +  +Y+  + G  E GRTEEA  L S MK  ++  N   Y
Sbjct: 670 IELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIY 729

Query: 536 RVMLLSFCKER 546
             ++  FCK +
Sbjct: 730 TALVTCFCKSK 740



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/411 (21%), Positives = 178/411 (43%), Gaps = 19/411 (4%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNV 204
           G   + +  N +++ L K GR D    +    +     PN ++FN  +  LCK       
Sbjct: 424 GLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIA 483

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
              +  MV  G  P+   +   +   CKM    E    +G M+      S   +T++I  
Sbjct: 484 WKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHK 543

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
             + R   +    W +MV +GC+P+VVTYT+ ++ +      + A + L  +   G   D
Sbjct: 544 LLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVD 603

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVC 384
            + +N L+D  + +G  D A+ +   +  +  VP+ +T+            F LL  LV 
Sbjct: 604 TMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTY------------FILLRHLVR 651

Query: 385 GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
              VE  L +  A +    KA        L++ M    F P++ ++  +L G     + +
Sbjct: 652 MRLVEDVLPLTPAGV---WKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTE 708

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
           EA ++   +  ++ ++N  ++TA+V    ++ R   A  L    I   +   ++SY   +
Sbjct: 709 EATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLL 768

Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
            GL+  G+T++A  ++   +     P+   ++V++    K+ +  + + ++
Sbjct: 769 SGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMI 819



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 80/386 (20%), Positives = 167/386 (43%), Gaps = 7/386 (1%)

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
           P    +  ++   C+   +A A + L LM+  G       +  LI G+ R  ++D+A  L
Sbjct: 151 PTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDL 210

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
           ++KM   G + +VV+Y +LI+G  EA     A         E   PD+  +  L+  L  
Sbjct: 211 FDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELF----GEMDQPDMHMYAALVKGLCN 266

Query: 338 MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVV 394
               ++ L +   + EL   P +  + +++   C   +     +++  +    +   +V 
Sbjct: 267 AERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVT 326

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
             A+++ +CK G  + A+++   M  +G  P+ +++  L++G C   K+ +A+ +   + 
Sbjct: 327 CTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMR 386

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
                 +A  +  ++      G    A +L R    +    D  +Y   I  L + GRT+
Sbjct: 387 ACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTD 446

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLT 574
           +A  L+  ++   + PNA T+  ++   CK     +  + L+ ++ A    D +T     
Sbjct: 447 QACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFI 506

Query: 575 KFIFKFHSSSSAVNQLVEMCNLGLIP 600
           + + K   S   ++ + EM    + P
Sbjct: 507 EHLCKMKGSQEGLSFIGEMLQKDVKP 532



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 60/270 (22%), Positives = 121/270 (44%), Gaps = 1/270 (0%)

Query: 287 SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALD 346
           +P   TY ++I+        + A  +L ++   G  PD    N LI    +    D A D
Sbjct: 150 APTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARD 209

Query: 347 VYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAG 406
           ++D +       D  ++ +L+  +C +GR     +L   ++ + D+ +Y AL+   C A 
Sbjct: 210 LFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMD-QPDMHMYAALVKGLCNAE 268

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
              + + +   M + G+ P   ++  ++   C  RK  EA  + Q +     A      T
Sbjct: 269 RGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCT 328

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
           A+++   + GR   A+++     +     +V +Y   ++G    G+  +A  L ++M+  
Sbjct: 329 AVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRAC 388

Query: 527 AVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
            V P+A TY +++   C + +I+   RLL+
Sbjct: 389 GVNPDAVTYNLLIRGQCIDGHIESAFRLLR 418


>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
          Length = 595

 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 101/407 (24%), Positives = 187/407 (45%), Gaps = 13/407 (3%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFG--FTPNTFARNIVMDVLFKIGRVDLGIKVLK 178
           T+ + L    +    G  L+  D M   G    P+    N V+D L KIGR+   I  + 
Sbjct: 168 TYGILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVD 227

Query: 179 ETQ------LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCK 232
           E         PN +++N      C++ D+     ++  M ++G  PNV     ++   C+
Sbjct: 228 ERMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCR 287

Query: 233 MGRIAEAYQLLGLMITLGTSLSVNA--WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNV 290
           +GR+  A +      T+      NA  ++ L   F     +DMA  L+ +M  +G  P+ 
Sbjct: 288 VGRVGAALEFFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDA 347

Query: 291 VTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDG 350
           V Y ++I G  +A     A +    ++  G   D   +N+LI    +     +A ++ + 
Sbjct: 348 VMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEE 407

Query: 351 LLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGF 407
           +  + L PD YT+ +LLS +C +G FS + +L+  +     +  +V +  L+  +CKAG 
Sbjct: 408 MKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGK 467

Query: 408 PNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTA 467
            ++A++++ +M +    P+   +  L+  LC +R++D AI ++  +   N   N   + A
Sbjct: 468 TDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNA 527

Query: 468 IVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
           ++  L +     KA +L  R   E+   + V+  V +  L E G TE
Sbjct: 528 LLKGLQDKKMAEKAFELMDRMREERCTPNYVTVDVLMEWLPEIGETE 574



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 107/422 (25%), Positives = 184/422 (43%), Gaps = 16/422 (3%)

Query: 132 GEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ------LPNF 185
           G + GM  E F  M      P+     I+++ L K G V   +KVL           P+ 
Sbjct: 145 GNLRGMT-ELFTSMRDASVKPDVVTYGILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDI 203

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRK--GFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
              N  +  LCK+  +      +   +R   G  PN   +  L + FC++G I  A +++
Sbjct: 204 AILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIV 263

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW--EKMVQNGCSPNVVTYTSLIKGFM 301
             M   G + +V     +I G  R+ R+  A   +  ++ V      N VTY++L   F+
Sbjct: 264 ARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRTVWPEARGNAVTYSTLASAFL 323

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
                 +A      +   GH PD V +  +I  L++ G   DA      + +     D+ 
Sbjct: 324 HCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAK 383

Query: 362 TFCSLLSTVC----LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
            +  L+   C    L   + LL ++  G+ ++ D+  YN LLS  CKAG  +   +L   
Sbjct: 384 AYNILIGGFCRKKKLHEAYELLEEMK-GVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGH 442

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           M+D G  P   +F  L+ G C A K DEA+ +++ +       N  ++  ++D L ++  
Sbjct: 443 MIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSRE 502

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
              AI+LF     +  P +V +Y   ++GL +    E+A+ L  +M+     PN  T  V
Sbjct: 503 VDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFELMDRMREERCTPNYVTVDV 562

Query: 538 ML 539
           ++
Sbjct: 563 LM 564



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 86/330 (26%), Positives = 147/330 (44%), Gaps = 10/330 (3%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG 173
           GC   A T+      + R    GM  +    M + G  PN    N ++  L ++GRV   
Sbjct: 235 GCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAA 294

Query: 174 IKVLKE--TQLP----NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILL 227
           ++  +E  T  P    N ++++         N+V    ++   M   G  P+  M+  ++
Sbjct: 295 LEFFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMI 354

Query: 228 NCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCS 287
           +   + GR+ +A      M   G  L   A+ +LI GF R ++L  A  L E+M   G  
Sbjct: 355 SGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQ 414

Query: 288 PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
           P+V TY +L+ G  +A  FS     L  +  +G  P +V    L+    K G  D+AL +
Sbjct: 415 PDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRI 474

Query: 348 YDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCK 404
           +  + E ++ P++  + +L+  +C S    +  KL   +    V A++  YNALL     
Sbjct: 475 FRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQD 534

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
                +A +L + M ++  TP NY  V +L
Sbjct: 535 KKMAEKAFELMDRMREERCTP-NYVTVDVL 563



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 91/399 (22%), Positives = 176/399 (44%), Gaps = 15/399 (3%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+   FN  L  L +  ++  + ++   M      P+V  + ILLN  CK G + +A ++
Sbjct: 129 PDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILLNGLCKSGHVGDALKV 188

Query: 243 LGLMITLGTSL--SVNAWTVLIDGFRRLRRLDMAG-YLWEKMVQ-NGCSPNVVTYTSLIK 298
           L  M + G+ +   +     ++DG  ++ RL  A  ++ E+M   +GC+PN VTY  L  
Sbjct: 189 LDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCAPNAVTYNCLAD 248

Query: 299 GFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV- 357
            F       +A   +  +E EG AP+++  N +I  L ++G    AL+ +    E + V 
Sbjct: 249 AFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFR---EKRTVW 305

Query: 358 ----PDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQ 410
                ++ T+ +L S         +  +L   +       D V+Y  ++S   +AG    
Sbjct: 306 PEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLD 365

Query: 411 AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
           A     +M   GF  D  ++  L+ G C  +K+ EA  + + +       + + +  ++ 
Sbjct: 366 ACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLS 425

Query: 471 RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
            L +AG      +L    I +     VV++   + G  + G+T+EA  ++  M    + P
Sbjct: 426 GLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQP 485

Query: 531 NAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
           N   Y  ++   CK R + +  +L  ++ +  +  +  T
Sbjct: 486 NTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTT 524



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 75/340 (22%), Positives = 136/340 (40%), Gaps = 13/340 (3%)

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           + AG+L + +     +P++  + SL+     A            +      PD+V + +L
Sbjct: 113 EAAGFLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGIL 172

Query: 332 IDCLSKMGSYDDALDVYDGLLE--LKLVPDSYTFCSLLSTVCLSGRFSLL-------PKL 382
           ++ L K G   DAL V D +      + PD     +++  +C  GR            + 
Sbjct: 173 LNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRH 232

Query: 383 VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
           V G    A  V YN L   FC+ G    A K+   M  +G  P+  +   ++ GLC   +
Sbjct: 233 VHGCAPNA--VTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGR 290

Query: 443 IDEAINVYQG--IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSY 500
           +  A+  ++    V      NA  ++ +    +       A++LF       +  D V Y
Sbjct: 291 VGAALEFFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMY 350

Query: 501 TVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
              I GL + GR  +A    + MK      +A  Y +++  FC+++ +     LL+++  
Sbjct: 351 FTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKG 410

Query: 561 ARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
             ++ D +T   L   + K    S+    L  M + G  P
Sbjct: 411 VGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQP 450


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 109/444 (24%), Positives = 192/444 (43%), Gaps = 80/444 (18%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRV-DLGI---KVLKETQLPNFLSFNIALCNL 195
           EAF     +G   +  + N +M  L K+G + D+     ++++    P  +SFNI +  L
Sbjct: 114 EAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGL 173

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ---LLGLMITLGTS 252
           CK+  ++   D+I  M  +G   NV  +  L++ +CKMG+I + Y+   +L  M   G  
Sbjct: 174 CKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGIC 233

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLI--------------- 297
            +   + +LIDGF + + +  A  ++ +M + G  PNVVTY SLI               
Sbjct: 234 PNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATAL 293

Query: 298 --------------------KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
                                GF + KM   A    D +  +G  P++  +N+LID   K
Sbjct: 294 RDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCK 353

Query: 338 MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVV 394
             + +DA  +Y  +L   + PD  T+  L++ +C  G       LV  ++   ++ADL+ 
Sbjct: 354 DENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLIT 413

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           YN L+   C  G   +A++L + M  KG  P   ++  ++ G C    +  A+N+     
Sbjct: 414 YNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRS--- 470

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
                           ++ + GR                  +V +Y V I+G  +  + E
Sbjct: 471 ----------------QMEKVGRLA----------------NVATYNVLIKGFCKKDKLE 498

Query: 515 EAYILYSQMKHIAVPPNAYTYRVM 538
           +A  L ++M    + PN  TY ++
Sbjct: 499 DANGLLNEMLEKGLIPNRMTYEIV 522



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 117/483 (24%), Positives = 209/483 (43%), Gaps = 52/483 (10%)

Query: 156 ARNIVMDVLF----KIGRVDLGIKVLKETQLPNFLSFNIALCN-----LCKLNDVSNVKD 206
           A +I++D+L     K  R  LG +  K       L  ++  CN     L K+ ++ +++ 
Sbjct: 91  ANSIIVDILVWAYAKNLRTRLGFEAFKRAS-DYGLKLSVTSCNPLMSGLVKVGEIGDMEF 149

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
           V   M+R+   P +  F I++N  CK+G++ +A  ++  M   G S +V  +  LIDG+ 
Sbjct: 150 VYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYC 209

Query: 267 RLRRLDM---AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP 323
           ++ ++     A  + ++M  +G  PN VT+  LI GF + K  S A      +  +G  P
Sbjct: 210 KMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKP 269

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV 383
           ++V +N LI+ L   G  ++A  + D ++   L P+                        
Sbjct: 270 NVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPN------------------------ 305

Query: 384 CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
                   ++ +NALL+ FCK     QA +L++ M  +G TP+  ++  L+   C    +
Sbjct: 306 --------IITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENM 357

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           ++A  +Y+ ++      +   +  ++  L   G    A  L      +    D+++Y + 
Sbjct: 358 EDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNIL 417

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           I  L   G  ++A  L  +M    + P+  TY  M+  +CKE N++    L   +     
Sbjct: 418 IDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGR 477

Query: 564 ELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTPVSLFDG 623
             +  T   L K   K      A   L EM   GLIP+ M       + E +T   +  G
Sbjct: 478 LANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRM-------TYEIVTEEMMEKG 530

Query: 624 FVP 626
           FVP
Sbjct: 531 FVP 533



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/345 (24%), Positives = 161/345 (46%), Gaps = 10/345 (2%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIK---VLKETQL----PNFLSFNIALCN 194
            ++M   G + N    N ++D   K+G++    K   +LKE +     PN ++FNI +  
Sbjct: 186 IEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDG 245

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
            CK  +VS    V   M R+G  PNV  +  L+N  C  G++ EA  L   M+      +
Sbjct: 246 FCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPN 305

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           +     L++GF + + +  AG L++ M + G +PNV TY  LI  + + +    AF+   
Sbjct: 306 IITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYR 365

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
           ++  +G  PD+  +N LI  L + G  + A ++   +    L  D  T+  L+ ++C  G
Sbjct: 366 IMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKG 425

Query: 375 RFSLLPKLV---CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
                 +L+   C   ++   + YN ++  +CK G    A+ L + M   G   +  ++ 
Sbjct: 426 EMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYN 485

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
            L++G C   K+++A  +   ++      N   +  + + ++E G
Sbjct: 486 VLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKG 530



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 83/336 (24%), Positives = 139/336 (41%), Gaps = 34/336 (10%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G+      I+ E+   G      TF + +  + + +     ++ F EM R G  PN    
Sbjct: 215 GKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTY 274

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFY 217
           N +++                             LCN  K+N+ + ++D    MV     
Sbjct: 275 NSLIN----------------------------GLCNNGKVNEATALRD---QMVNSCLK 303

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
           PN+     LLN FCK   + +A +L   M   G + +V  + +LID + +   ++ A  L
Sbjct: 304 PNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFAL 363

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
           +  M+  G  P+V TY  LI G         A + +  ++++    DL+ +N+LID L  
Sbjct: 364 YRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCN 423

Query: 338 MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE---ADLVV 394
            G    AL + D +    L P   T+ +++   C  G       L   +E     A++  
Sbjct: 424 KGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVAT 483

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           YN L+  FCK      A  L N ML+KG  P+  ++
Sbjct: 484 YNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTY 519



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 103/228 (45%), Gaps = 14/228 (6%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDV---------LFKIGRVD 171
           T    L  + + +M     E FD+M + G TPN    NI++D           F + R+ 
Sbjct: 308 THNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIM 367

Query: 172 LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFC 231
           LG  V      P+  ++N  +  LC+  D+   ++++  M  K    ++  + IL++  C
Sbjct: 368 LGKGVC-----PDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLC 422

Query: 232 KMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVV 291
             G + +A +LL  M   G   S   +  +IDG+ +   L  A  L  +M + G   NV 
Sbjct: 423 NKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVA 482

Query: 292 TYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
           TY  LIKGF +      A   L+ +  +G  P+ + + ++ + + + G
Sbjct: 483 TYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKG 530


>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
 gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
          Length = 501

 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 92/379 (24%), Positives = 179/379 (47%), Gaps = 7/379 (1%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           ++ TV  +  ++   G      T  + +    R       +    +M + G  P++    
Sbjct: 101 QYSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFT 160

Query: 159 IVMDVLFKIGRVDLGIKVLKE----TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
            +++ L   GR+   +++  E      +PN ++F I +  LCK   VS  + V   M  K
Sbjct: 161 TLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEK 220

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           G  PN+  +  L+N +C    + +A ++  +M+  G + SV+++++LI+G+ + RR+D A
Sbjct: 221 GVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEA 280

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             L  +M +    PN VTY +L++G   A     A      + S G  P+L  +++L+D 
Sbjct: 281 KALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDG 340

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEAD 391
           L K G  ++AL +   + E KL PD   +  L+  + ++G+  +  +L   L    +   
Sbjct: 341 LCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPS 400

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
           +  YN ++    K G  ++A KL+  M D GF PD+ S+  +++G    +    AI +  
Sbjct: 401 VRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLID 460

Query: 452 GIVMNNPAVNAHVHTAIVD 470
            +V    + ++     ++D
Sbjct: 461 EMVGRRFSADSSTFKMLLD 479



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 89/386 (23%), Positives = 173/386 (44%), Gaps = 32/386 (8%)

Query: 184 NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
           N  + NI + +LC+L+ +     V+  M + G  P+   F  L+N  C  GRI EA +L 
Sbjct: 120 NDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELF 179

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
             M       +   +T+L+D   +   +  A  ++E M + G  PN+ TY +L+ G+   
Sbjct: 180 NEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLR 239

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
              + A    +++  +G AP +  +++LI+   K    D+A  +   + E +L+P++   
Sbjct: 240 LEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNT--- 296

Query: 364 CSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
                                        V YN L+   C A    +A +L+  M   G 
Sbjct: 297 -----------------------------VTYNTLMQGLCHASSLLEAQELFKKMCSSGM 327

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
            P+  ++  LL GLC    ++EA+ +   +       +  ++  ++  +  AG+   A +
Sbjct: 328 LPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKE 387

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           LF +         V +Y + I+GLL+ G ++EAY L+ +M+     P++ +Y V++  F 
Sbjct: 388 LFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFL 447

Query: 544 KERNIKMVKRLLQDVIDARIELDYHT 569
           + ++     +L+ +++  R   D  T
Sbjct: 448 QNQDPSTAIQLIDEMVGRRFSADSST 473



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/299 (23%), Positives = 145/299 (48%), Gaps = 3/299 (1%)

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           +D A   + +M+     P+ V     +    + K +S   S  + ++  G A +    N+
Sbjct: 67  IDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNI 126

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLE 387
           LI+ L ++     A+ V   + +L + PDS TF +L++ +C  GR     +L   + G +
Sbjct: 127 LINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRD 186

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
              + V +  L+   CK G  ++A  ++ TM +KG  P+ Y++  L+ G C   ++++A 
Sbjct: 187 AMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDAS 246

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            V++ +V    A + H ++ +++   ++ R  +A  L  +   ++   + V+Y   ++GL
Sbjct: 247 KVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGL 306

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
                  EA  L+ +M    + PN  TY ++L   CK  +++   +LL  + + ++E D
Sbjct: 307 CHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPD 365



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 103/457 (22%), Positives = 181/457 (39%), Gaps = 54/457 (11%)

Query: 165 FKIGRVDLGIKVLKETQLPNFL-----SFNIALC----NLCKLND--VSNVKDVIGM--- 210
           F+  +V++GI  L     P+FL       N + C    +L + N   VSN  + IG+   
Sbjct: 13  FQQQQVEMGI--LLPPDFPSFLFSNHHHLNTSTCTKKPSLPQNNGGFVSNNSNDIGIDDA 70

Query: 211 ------MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
                 M+     P+       L    K  + +    L   M   G + +     +LI+ 
Sbjct: 71  MASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINS 130

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
             RL  +  A  +  KM + G  P+ VT+T+LI G         A    + +      P+
Sbjct: 131 LCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPN 190

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVC 384
            V   +L+D L K G   +A  V++ + E  + P+ YT                      
Sbjct: 191 TVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYT---------------------- 228

Query: 385 GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
                     YNAL++ +C     N A K++  M+ KG  P  +S+  L+ G C +R+ID
Sbjct: 229 ----------YNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRID 278

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
           EA  +   +       N   +  ++  L  A    +A +LF++        ++ +Y++ +
Sbjct: 279 EAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILL 338

Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
            GL + G  EEA  L + M+   + P+   Y +++        +++ K L   +    I 
Sbjct: 339 DGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIR 398

Query: 565 LDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
               T   + K + K   S  A     +M + G +PD
Sbjct: 399 PSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPD 435



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 76/312 (24%), Positives = 132/312 (42%), Gaps = 45/312 (14%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA---FDEMGRFGFTPNT 154
           GR +    +  E+A    +    TF + + +  +    GMV EA   F+ M   G  PN 
Sbjct: 170 GRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKK---GMVSEARCVFETMTEKGVEPNI 226

Query: 155 FARNIVMD------------VLFKI-----------------------GRVDLGIKVLKE 179
           +  N +M+             +F+I                        R+D    +L +
Sbjct: 227 YTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQ 286

Query: 180 TQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGR 235
                 +PN +++N  +  LC  + +   +++   M   G  PN+R + ILL+  CK G 
Sbjct: 287 MSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGH 346

Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
           + EA +LL  M        +  + +LI G     +L++A  L+ K+  NG  P+V TY  
Sbjct: 347 LEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNI 406

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           +IKG ++  +   A+     +E +G  PD   +NV+I    +      A+ + D ++  +
Sbjct: 407 MIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRR 466

Query: 356 LVPDSYTFCSLL 367
              DS TF  LL
Sbjct: 467 FSADSSTFKMLL 478


>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 808

 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 94/409 (22%), Positives = 191/409 (46%), Gaps = 8/409 (1%)

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKL 198
           D  G+ G  P+    N+++D   K G +    + LKE +    LP   ++   +   CK 
Sbjct: 226 DRWGK-GCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKA 284

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
            +   V  ++  M  +G   NV++F  +++   K G + +A + +  M  +G    +  +
Sbjct: 285 GEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTY 344

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
             +I+   +  R+  A    EK  + G  PN  +YT L+  + +   +  A   L  +  
Sbjct: 345 NTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAE 404

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL 378
            G  PDLV +   I  +   G  D AL V + ++E  + PD+  +  L+S +C +GRF  
Sbjct: 405 IGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPA 464

Query: 379 LPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
           +  L+  +    V+ D+ V+  L+  F + G  ++A+K++  ++ KG  P    +  +++
Sbjct: 465 MKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIK 524

Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
           G C   K+ +A++    +   + A + + ++ ++D  ++      A+++F + +  K+  
Sbjct: 525 GFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKP 584

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
           +V++YT  I G  +      A  ++  MK   + PN  TY  ++  F K
Sbjct: 585 NVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFK 633



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 99/432 (22%), Positives = 192/432 (44%), Gaps = 12/432 (2%)

Query: 133 EMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSF 188
           ++Y  +L+  D  G      + +  +IV+  L  +G+++ G +++K+      +P+ + +
Sbjct: 183 QLYDKMLQTDDGTGA---VVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFY 239

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           N+ +   CK  D+      +  +  KG  P V  +  L+N FCK G      QLL  M  
Sbjct: 240 NMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAA 299

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
            G +++V  +  +ID   +   +  A     +M + GC P++ TY ++I    +      
Sbjct: 300 RGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKE 359

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A  FL+  +  G  P+   +  L+    K G Y  A  +   + E+   PD  ++ + + 
Sbjct: 360 ADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIH 419

Query: 369 TVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAG-FPNQAVKLYNTMLDKGFT 424
            V + G      ++ + +    V  D  +YN L+S  CK G FP   + L + MLD+   
Sbjct: 420 GVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKL-LLSEMLDRNVQ 478

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           PD Y F  L+ G     ++DEAI +++ I+          + A++    + G+   A+  
Sbjct: 479 PDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSC 538

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
             +     +  D  +Y+  I G ++      A  ++ QM      PN  TY  ++  FCK
Sbjct: 539 LNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCK 598

Query: 545 ERNIKMVKRLLQ 556
           + ++   +++ +
Sbjct: 599 KADMIRAEKVFR 610



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 113/500 (22%), Positives = 219/500 (43%), Gaps = 63/500 (12%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           K +     V+++  +I+   +  G FE V  ++ E+A  G  +  + F   +   ++   
Sbjct: 263 KMKGVLPTVETYGALINGFCK-AGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFK--- 318

Query: 135 YGMVLEAFDEMGRF---GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLS 187
           YG+V +A + M R    G  P+    N +++   K GR+    + L++ +    LPN  S
Sbjct: 319 YGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFS 378

Query: 188 FNIALCNLCKLND-------------VSNVKDVI-----------------GMMVR---- 213
           +   +   CK  D             +    D++                  +MVR    
Sbjct: 379 YTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMM 438

Query: 214 -KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
            KG +P+ +++ +L++  CK GR      LL  M+       V  +  L+DGF R   LD
Sbjct: 439 EKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELD 498

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A  +++ +++ G  P +V Y ++IKGF +    + A S L+ +++  HAPD   ++ +I
Sbjct: 499 EAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVI 558

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVE 389
           D   K      AL ++  +++ K  P+  T+ SL++  C         K+  G+   ++ 
Sbjct: 559 DGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLV 618

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK----IDE 445
            ++V Y  L+  F KAG P +A  ++  ML  G  P++ +F  L+ GL         I+E
Sbjct: 619 PNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGLTNTATSPVLIEE 678

Query: 446 A----------INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
                      ++ +  ++          + +++  L + G    A  L  + + + + +
Sbjct: 679 KDSMENERSLILDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDTAQLLLTKMLTKGFLI 738

Query: 496 DVVSYTVAIRGLLEGGRTEE 515
           D V +T  + GL   G+++E
Sbjct: 739 DSVCFTAMLHGLCHKGKSKE 758



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/412 (22%), Positives = 187/412 (45%), Gaps = 19/412 (4%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKE---------TQLPNFLSFNI--ALCNLCKLND 200
           P   A N +++ L K G+VD+ +++  +           + N+ +  +   LCNL K+ +
Sbjct: 160 PTVVASNSLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEE 219

Query: 201 VSN-VKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
               VKD  G    KG  P+V  + ++++ +CK G +  A + L  +   G   +V  + 
Sbjct: 220 GRRLVKDRWG----KGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYG 275

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
            LI+GF +    +    L  +M   G + NV  + ++I    +  + + A   +  +   
Sbjct: 276 ALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEM 335

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
           G  PD+  +N +I+   K G   +A +  +   E  L+P+ +++  L+   C  G +   
Sbjct: 336 GCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKA 395

Query: 380 PKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
             +   +  +  + DLV Y A +      G  + A+ +   M++KG  PD   +  L+ G
Sbjct: 396 AGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSG 455

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
           LC   +      +   ++  N   + +V   ++D  I  G   +AI++F+  I +     
Sbjct: 456 LCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPG 515

Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
           +V Y   I+G  + G+  +A    ++MK++   P+ YTY  ++  + K+ ++
Sbjct: 516 IVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDM 567



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 99/446 (22%), Positives = 193/446 (43%), Gaps = 28/446 (6%)

Query: 70  FIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVG---CVIKAQTFLLFL 126
           F+  AK+R    +  S+  ++    +  G +    G++  +A +G    ++    F+  +
Sbjct: 363 FLEKAKERGLLPNKFSYTPLMHAYCK-QGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGV 421

Query: 127 RIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD----LGIKVLKETQL 182
            ++   ++  MV E   E G F   P+    N++M  L K GR      L  ++L     
Sbjct: 422 VVHGEIDVALMVREKMMEKGVF---PDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQ 478

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+   F   +    +  ++     +  +++RKG  P +  +  ++  FCK G++ +A   
Sbjct: 479 PDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSC 538

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           L  M  +  +     ++ +IDG+ +   +  A  ++ +M+++   PNV+TYTSLI GF +
Sbjct: 539 LNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCK 598

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
                 A      ++S    P++V +  L+    K G  + A  +++ +L     P+  T
Sbjct: 599 KADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDAT 658

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGLEVEADLVV-----------------YNALLSYFCKA 405
           F  L++ +  +    +L +    +E E  L++                 YN+++   CK 
Sbjct: 659 FHYLINGLTNTATSPVLIEEKDSMENERSLILDFFTMMLSEGWDQVIAAYNSVIVCLCKH 718

Query: 406 GFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVH 465
           G  + A  L   ML KGF  D+  F  +L GLC   K  E  N+    +       A  +
Sbjct: 719 GMVDTAQLLLTKMLTKGFLIDSVCFTAMLHGLCHKGKSKEWRNIISCDLNKIELQTAVKY 778

Query: 466 TAIVDRLIEAGRCHKAIQLFRRAIVE 491
           +  +D+ +  GR  +A  + +  I E
Sbjct: 779 SLTLDKYLYQGRLSEASVILQTLIEE 804


>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
          Length = 1091

 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 133/573 (23%), Positives = 253/573 (44%), Gaps = 29/573 (5%)

Query: 46  IILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRG 105
           ++    +VH  L + P    AL  F   A+Q    H  +S ++M+ ++ R  GR      
Sbjct: 65  VVGTDSVVH-MLRSAPDPAEALELFTAAARQPTKVHTTESCNYMLELM-RAHGR------ 116

Query: 106 IVGELARVGCVIKAQ-------TF-LLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
            VG++A+V  +++ Q       TF  +F  +   G +    + A   M   G + N +  
Sbjct: 117 -VGDMAQVFDLMQKQVVKTNVGTFATIFGGVGVEGGLRSAPV-ALPVMREAGMSLNAYTY 174

Query: 158 NIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N ++  L K G     ++V K    +   P+  ++++ +    K  DV  V  ++  M  
Sbjct: 175 NGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEA 234

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +G  PNV  + I +    +  R  EAY +LG M   G    V   TV+I       RL  
Sbjct: 235 RGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSD 294

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  ++ KM  +   P+ VTY +L+    ++          + + ++G+  ++V +  ++D
Sbjct: 295 AKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVD 354

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL-----VCGLEV 388
            L ++G  D+AL V+D + E  + P+ Y++ SL+S    +  F    +L      CG   
Sbjct: 355 ALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSP 414

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
                 +   ++Y+ K+G   +A++ Y  M  KG  PD  +   +L  L G+ ++  A  
Sbjct: 415 NG--YTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKR 472

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           V+  +     + +   +T ++    +A +  +A+  F   +      DV++    I  L 
Sbjct: 473 VFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLY 532

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
           +GG+  EA+ L+ ++K + + P   TY  +L    +E  +K V +LL+++       +  
Sbjct: 533 KGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLI 592

Query: 569 TSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           T   +   + K    + A++ L  M   G  PD
Sbjct: 593 TYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPD 625



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 94/448 (20%), Positives = 194/448 (43%), Gaps = 7/448 (1%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG 173
           G     +T+ + +  + +      VL   +EM   G  PN ++  I + VL +  R D  
Sbjct: 201 GISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEA 260

Query: 174 IKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
             +L + +     P+ ++  + +  LC    +S+ K V   M      P+   +  LL+ 
Sbjct: 261 YHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDK 320

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
               G      ++   M+  G + ++ ++T ++D   ++ R+D A  ++++M + G SP 
Sbjct: 321 CGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPE 380

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
             +Y SLI GF++A MF  A    + + + G +P+   H + I+   K G    A+  Y+
Sbjct: 381 QYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYE 440

Query: 350 GLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAG 406
            +    +VPD     ++L ++  SGR  +  ++   L+   V  D + Y  ++    KA 
Sbjct: 441 HMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKAS 500

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
             ++A+  ++ M++ G  PD  +   L+  L    K +EA  ++  +           + 
Sbjct: 501 KADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYN 560

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
            ++  L   G+  + +QL        YP ++++Y   +  L + G    A  +   M   
Sbjct: 561 TLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEK 620

Query: 527 AVPPNAYTYRVMLLSFCKERNIKMVKRL 554
              P+  +Y  ++    KE  ++   R+
Sbjct: 621 GCAPDLSSYNTVMYGLIKEERLEEAFRM 648



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 111/540 (20%), Positives = 229/540 (42%), Gaps = 13/540 (2%)

Query: 71  IWCAKQRDYFHD-VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIY 129
           +W A   D ++D + S+  ++  + ++ GR +    +  E+   G   +  ++   +  +
Sbjct: 333 VWNAMVADGYNDNIVSYTAVVDALCQV-GRVDEALAVFDEMKEKGMSPEQYSYNSLISGF 391

Query: 130 WRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNF 185
            + +M+   LE F+ M   G +PN +   + ++   K G+    I+  +  +    +P+ 
Sbjct: 392 LKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDV 451

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGL 245
            + N  L +L     +   K V   +   G  P+   + +++ C  K  +  EA      
Sbjct: 452 AAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSD 511

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           M+  G    V A   LID   +  + + A  L+ K+ +    P   TY +L+ G      
Sbjct: 512 MVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGK 571

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
                  L+ +    + P+L+ +N ++DCLSK G  + A+D+   + E    PD  ++ +
Sbjct: 572 VKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNT 631

Query: 366 LLSTVCLSGRFSLLPKLVCGLE--VEADLVVYNALLSYFCKAGFPNQA---VKLYNTMLD 420
           ++  +    R     ++ C ++  +  D      +L  F K G   +A   VK Y  +L 
Sbjct: 632 VMYGLIKEERLEEAFRMFCQMKKILAPDYATLCTILPSFVKNGLMKEALHTVKEY--ILK 689

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
            G   D  SF  L+ G+     ++++I   + I      +N      ++  L +  +  +
Sbjct: 690 AGCNVDKSSFHSLMEGILKKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALE 749

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
           A QLF +       L   SY   IRGL++    + A  L+++MK +   P+ +TY ++L 
Sbjct: 750 AHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILD 809

Query: 541 SFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           +  K   ++ + ++ +++     E  Y T   +   + K      A++    + + G  P
Sbjct: 810 AMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSP 869



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 84/364 (23%), Positives = 164/364 (45%), Gaps = 36/364 (9%)

Query: 113  VGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDL 172
            +G  +K  ++   +R      +  +  + F EM R G  P+ F  N+++D + K  RV+ 
Sbjct: 760  LGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEE 819

Query: 173  GIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLN 228
             +KV KE         ++++N  +  L K   +    D+   ++ +GF P    +  LL+
Sbjct: 820  MLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLD 879

Query: 229  CFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSP 288
               K G++ +A  L   M+  G   +   + +L++G R     +    L+EKMV+ G +P
Sbjct: 880  GLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINP 939

Query: 289  NVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVY 348
            ++ +YT LI     A   +    +   L   G  PDL+ +N+LID L K    ++A+ ++
Sbjct: 940  DIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLF 999

Query: 349  DGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFP 408
            + + +  ++P+ YT                                YN+L+ +  KAG  
Sbjct: 1000 NEMKKKGIIPNLYT--------------------------------YNSLILHLGKAGKA 1027

Query: 409  NQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAI 468
             +A ++Y  +L KG+ P  +++  L+RG   +   D A   Y  +++     N+  +  +
Sbjct: 1028 AEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNAYAAYGQMIVGGCQPNSSTYMQL 1087

Query: 469  VDRL 472
             ++L
Sbjct: 1088 PNQL 1091



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 117/589 (19%), Positives = 234/589 (39%), Gaps = 91/589 (15%)

Query: 61   PSDLIALSFFIWCAKQRDYFHDVQSFDHMIS------------VVTRL--TGRFETVRGI 106
            P+    + F  +  K       +Q ++HM S            V+  L  +GR    + +
Sbjct: 414  PNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRV 473

Query: 107  VGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK 166
              EL  +G      T+ + ++   +       +  F +M   G  P+  A N ++D L+K
Sbjct: 474  FYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYK 533

Query: 167  IGRVDLGIKV---LKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
             G+ +   ++   LKE ++ P   ++N  L  L +   V  V  ++  M R  + PN+  
Sbjct: 534  GGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLIT 593

Query: 223  FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW---- 278
            +  +L+C  K G +  A  +L  M   G +  ++++  ++ G  +  RL+ A  ++    
Sbjct: 594  YNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMK 653

Query: 279  -------------------------------EKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
                                           E +++ GC+ +  ++ SL++G ++     
Sbjct: 654  KILAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVE 713

Query: 308  IAFSFLDMLESEG-----------------HAPDLVFHNVL-----IDCLSKMGSY---- 341
             +  F + + S G                 H   L  H +      +    K GSY    
Sbjct: 714  KSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLI 773

Query: 342  ---------DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VE 389
                     D A D++  +  L   PD +T+  +L  +  S R   + K+   +     E
Sbjct: 774  RGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYE 833

Query: 390  ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            +  V YN ++S   K+    QA+ LY  ++ +GF+P   ++  LL GL  + K+ +A N+
Sbjct: 834  STYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENL 893

Query: 450  YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
            +  ++      N  ++  +++    AG      QLF + + +    D+ SYT+ I  L  
Sbjct: 894  FNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCT 953

Query: 510  GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
             GR  +    + Q+  + + P+   Y +++    K   I+    L  ++
Sbjct: 954  AGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEM 1002



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 118/511 (23%), Positives = 200/511 (39%), Gaps = 114/511 (22%)

Query: 138  VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALC 193
            V++  +EM R  + PN    N V+D L K G V+  I +L    ++   P+  S+N  + 
Sbjct: 575  VMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMY 634

Query: 194  NL-------------CKLNDV-------------------------SNVKDVI------- 208
             L             C++  +                           VK+ I       
Sbjct: 635  GLIKEERLEEAFRMFCQMKKILAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAGCNV 694

Query: 209  ----------GMMVRKG------FYPNVRMFEILLNCF---------CKMGRIAEAYQLL 243
                      G++ + G      F  N+    ILLN F         CK  +  EA+QL 
Sbjct: 695  DKSSFHSLMEGILKKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLF 754

Query: 244  GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN-------------- 289
                 LG SL   ++  LI G      +D+A  L+ +M + GC P+              
Sbjct: 755  NKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKS 814

Query: 290  ---------------------VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH 328
                                  VTY ++I G +++K    A      L SEG +P    +
Sbjct: 815  MRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTY 874

Query: 329  NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLVC 384
              L+D L K G   DA ++++ +LE    P+   +  LL+   ++G       L  K+V 
Sbjct: 875  GPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMV- 933

Query: 385  GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
               +  D+  Y  L+   C AG  N  +  +  + + G  PD   +  L+ GL  + +I+
Sbjct: 934  EQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIE 993

Query: 445  EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
            EA++++  +       N + + +++  L +AG+  +A Q++   + + +   V +Y   I
Sbjct: 994  EAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALI 1053

Query: 505  RGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
            RG    G T+ AY  Y QM      PN+ TY
Sbjct: 1054 RGYSVSGSTDNAYAAYGQMIVGGCQPNSSTY 1084


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 124/514 (24%), Positives = 215/514 (41%), Gaps = 66/514 (12%)

Query: 136 GMVLEAF---DEMGRFG-FTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLS 187
           G V EAF   DEM R G   P+    N + D  FK       +++L+E +        ++
Sbjct: 323 GKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVT 382

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
            NI +  LCK  ++      +  M   G  P+V  +  L++  CK G IA+AY L+  M+
Sbjct: 383 HNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMV 442

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
             G  L       ++    + +R + A  L +   Q G  P+ V+Y +++  + +     
Sbjct: 443 RRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSE 502

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A    D +  +   P +  +N LI  LS+MG   +A+D  + L+E  LVPD  T     
Sbjct: 503 PALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTT----- 557

Query: 368 STVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
                                      YN ++  +CK G    A + +N M++  F PD 
Sbjct: 558 ---------------------------YNIIIHAYCKEGDLENAFQFHNKMVENSFKPDV 590

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
            +   L+ GLC   K+D+A+ +++  V     V+   +  ++  + + G    A+  F  
Sbjct: 591 VTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFAD 650

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN 547
                   D  +Y V +  L E GRTEEA  +  ++        +++  ++  S   E  
Sbjct: 651 MEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDE-- 708

Query: 548 IKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVE-MCNLG------LIP 600
                   +   DA+ E +   + +         S+S A  +LV  +C  G       I 
Sbjct: 709 -------AESGKDAKTEEETVENPQ--------DSASEAYTKLVNGLCTSGQFKEAKAIL 753

Query: 601 DEMWRKLGLLSDETMTPVSLFDGFVPCERRAGNA 634
           DEM +K G+  D + T ++L +G V  ++R  +A
Sbjct: 754 DEMMQK-GMSVDSS-TYITLMEGLVKRQKRLTHA 785



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 104/487 (21%), Positives = 205/487 (42%), Gaps = 8/487 (1%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD----LGIKV 176
           TF L +  +         L     M  FG +P+    N +++   + G +     L  ++
Sbjct: 206 TFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARM 265

Query: 177 LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
            K+   P   ++N  +    +L  +     V+  M   GF P++  + +L    C+ G++
Sbjct: 266 KKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKV 325

Query: 237 AEAYQLLGLMITLGTSL-SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
            EA++L   M  LGT L  V  +  L D   + R    A  L E+M + G    +VT+  
Sbjct: 326 DEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNI 385

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           +IKG  +      A   L+ +  +G APD++ +N LI    K G+   A  + D ++   
Sbjct: 386 VIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRG 445

Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAV 412
           L  D++T  ++L  +C   R+     L+          D V Y  +++ + K      A+
Sbjct: 446 LKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPAL 505

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
           +L++ M++K  TP   ++  L++GL    ++ EAI+    ++      +   +  I+   
Sbjct: 506 RLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAY 565

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
            + G    A Q   + +   +  DVV+    + GL   G+ ++A  L+          + 
Sbjct: 566 CKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDV 625

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVE 592
            TY  ++ + CK+ ++        D+    ++ D  T   +   + +   +  A N L +
Sbjct: 626 ITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHK 685

Query: 593 MCNLGLI 599
           +   G +
Sbjct: 686 LAESGTL 692



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/372 (24%), Positives = 165/372 (44%), Gaps = 6/372 (1%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           PN  +FN+ +   C    +++    +  M   G  P+   +  LLN  C+ G + EA  L
Sbjct: 202 PNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARAL 261

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           L  M   G + +   +  L+  + RL  +  A  + E M  NG  P++ TY  L  G  +
Sbjct: 262 LARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQ 321

Query: 303 AKMFSIAFSFLDMLESEGH-APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           A     AF   D +E  G   PD+V +N L D   K     DAL + + + E  +     
Sbjct: 322 AGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLV 381

Query: 362 TFCSLLSTVC----LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
           T   ++  +C    L G    L K+     +  D++ YN L+   CKAG   +A  L + 
Sbjct: 382 THNIVIKGLCKDGELEGALGCLNKMADD-GLAPDVITYNTLIHAHCKAGNIAKAYTLMDE 440

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           M+ +G   D ++   +L  LC  ++ +EA  + Q         +   +  ++    +   
Sbjct: 441 MVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYN 500

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
              A++L+   I +K    + +Y   I+GL   GR +EA    +++    + P+  TY +
Sbjct: 501 SEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNI 560

Query: 538 MLLSFCKERNIK 549
           ++ ++CKE +++
Sbjct: 561 IIHAYCKEGDLE 572



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 100/473 (21%), Positives = 204/473 (43%), Gaps = 12/473 (2%)

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCN 194
           L+AF  +      PN +  N+++      G +   +  L   Q     P+ +++N  L  
Sbjct: 189 LDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNA 248

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
            C+   +   + ++  M + G  P    +  L++ + ++G I +A +++  M   G    
Sbjct: 249 HCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPD 308

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCS-PNVVTYTSLIKGFMEAKMFSIAFSFL 313
           +  + VL  G  +  ++D A  L ++M + G   P+VVTY +L     + +  S A   L
Sbjct: 309 LWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLL 368

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           + +  +G    LV HN++I  L K G  + AL   + + +  L PD  T+ +L+   C +
Sbjct: 369 EEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKA 428

Query: 374 GR----FSLLPKLVC-GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
           G     ++L+ ++V  GL++  D    N +L   CK     +A  L  +   +GF PD  
Sbjct: 429 GNIAKAYTLMDEMVRRGLKL--DTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEV 486

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
           S+  ++         + A+ ++  ++      +   +  ++  L   GR  +AI      
Sbjct: 487 SYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNEL 546

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
           + +    D  +Y + I    + G  E A+  +++M   +  P+  T   ++   C    +
Sbjct: 547 MEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKL 606

Query: 549 KMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
               +L +  ++   ++D  T   L + + K     +A++   +M   GL PD
Sbjct: 607 DKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPD 659



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 101/427 (23%), Positives = 168/427 (39%), Gaps = 43/427 (10%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVK--DVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAY 240
           P+  + N  L  L +    S     D    +V    +PN   F +L++  C  G +A+A 
Sbjct: 165 PSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADAL 224

Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
             L  M   G S     +  L++   R   L  A  L  +M ++G +P   TY +L+  +
Sbjct: 225 STLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAY 284

Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL-KLVPD 359
                   A   ++ + + G  PDL  +NVL   L + G  D+A  + D +  L  L+PD
Sbjct: 285 ARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPD 344

Query: 360 SYTFCSLLSTV----CLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLY 415
             T+ +L        C S    LL ++     V+A LV +N ++   CK G    A+   
Sbjct: 345 VVTYNTLADACFKCRCSSDALRLLEEMR-EKGVKATLVTHNIVIKGLCKDGELEGALGCL 403

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
           N M D G  PD  ++  L+   C                                   +A
Sbjct: 404 NKMADDGLAPDVITYNTLIHAHC-----------------------------------KA 428

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
           G   KA  L    +     LD  +    +  L +  R EEA  L          P+  +Y
Sbjct: 429 GNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSY 488

Query: 536 RVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCN 595
             ++ ++ KE N +   RL  ++I+ ++     T   L K + +      A+++L E+  
Sbjct: 489 GTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELME 548

Query: 596 LGLIPDE 602
            GL+PD+
Sbjct: 549 KGLVPDD 555



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 75/322 (23%), Positives = 131/322 (40%), Gaps = 41/322 (12%)

Query: 323 PDLVFHNVLIDCLSKMGSYDD--ALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----- 375
           P L   N ++  L++  S     +LD +  ++ L+L P+ YTF  L+ T C  G      
Sbjct: 165 PSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADAL 224

Query: 376 --------FSLLPKLVC-----------GLEVEADLVV--------------YNALLSYF 402
                   F L P  V            G+  EA  ++              YN L+S +
Sbjct: 225 STLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAY 284

Query: 403 CKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV-MNNPAVN 461
            + G+  QA K+   M   GF PD +++  L  GLC A K+DEA  +   +  +     +
Sbjct: 285 ARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPD 344

Query: 462 AHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYS 521
              +  + D   +      A++L      +     +V++ + I+GL + G  E A    +
Sbjct: 345 VVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLN 404

Query: 522 QMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFH 581
           +M    + P+  TY  ++ + CK  NI     L+ +++   ++LD  T   +   + K  
Sbjct: 405 KMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEK 464

Query: 582 SSSSAVNQLVEMCNLGLIPDEM 603
               A   L      G +PDE+
Sbjct: 465 RYEEAQGLLQSPPQRGFMPDEV 486


>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
          Length = 455

 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 162/349 (46%), Gaps = 12/349 (3%)

Query: 136 GMVLEAFDEM----GRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-----PNFL 186
           G V  A D M     R G  PN +    V+    K+GRVD  +KV  E        P  +
Sbjct: 86  GRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAV 145

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
            +N  +   C    +         MV +G    V  + +L++     GR  EAY+L+  M
Sbjct: 146 MYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEM 205

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
              G +  V  + +LI+G  +   +  A  ++E M + G    VVTYTSLI    +    
Sbjct: 206 GGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQV 265

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
                  D     G  PDLV +N LI+  S  G+ D A ++   + + ++ PD  T+ +L
Sbjct: 266 QETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTL 325

Query: 367 LSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           +  +CL GR     KL+  +    ++ DLV YN L+S +   G    A+++ N M++KGF
Sbjct: 326 MRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGF 385

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
            P   ++  L++GLC   + D+A N+ + +V N    +   + ++++ L
Sbjct: 386 NPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 434



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/409 (22%), Positives = 189/409 (46%), Gaps = 5/409 (1%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDV 201
           F +M R      T   NI++  L   G+    +++L++   PN +++N  +   C    V
Sbjct: 29  FADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPRPNAVTYNTVIAGFCSRGRV 88

Query: 202 SNVKDVI-GMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG-TSLSVNAWT 259
               D++  M  R G  PN   +  +++ +CK+GR+ EA ++   M+T G        + 
Sbjct: 89  QAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYN 148

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
            LI G+    +LD A    ++MV+ G +  V TY  L+         + A+  ++ +  +
Sbjct: 149 ALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK 208

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
           G APD+  +N+LI+   K G+   AL++++ +    +     T+ SL+  +   G+    
Sbjct: 209 GLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQET 268

Query: 380 PKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
            KL        +  DLV+YNAL++    +G  ++A ++   M  K   PD+ ++  L+RG
Sbjct: 269 DKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRG 328

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
           LC   ++DEA  +   +       +   +  ++      G    A+++    + + +   
Sbjct: 329 LCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPT 388

Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
           +++Y   I+GL + G+ ++A  +  +M    + P+  TY  ++     E
Sbjct: 389 LLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 437



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/414 (22%), Positives = 177/414 (42%), Gaps = 21/414 (5%)

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           F I+L   C  G+ A A +LL  M       +   +  +I GF    R+  A  +  +M 
Sbjct: 44  FNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMREMR 99

Query: 283 Q-NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH-APDLVFHNVLIDCLSKMGS 340
           +  G +PN  TY ++I G+ +      A    D + ++G   P+ V +N LI      G 
Sbjct: 100 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 159

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV---CGLEVEADLVVYNA 397
            D AL   D ++E  +     T+  L+  + + GR +   +LV    G  +  D+  YN 
Sbjct: 160 LDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNI 219

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
           L++  CK G   +A++++  M  +G      ++  L+  L    ++ E   ++   V   
Sbjct: 220 LINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRG 279

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAY 517
              +  ++ A+++    +G   +A ++      ++   D V+Y   +RGL   GR +EA 
Sbjct: 280 IRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEAR 339

Query: 518 ILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFI 577
            L  +M    + P+  TY  ++  +  + ++K   R+  ++++        T   L + +
Sbjct: 340 KLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGL 399

Query: 578 FKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTPVSLFDGFVPCERRA 631
            K      A N + EM   G+ PD+             T +SL +G    + RA
Sbjct: 400 CKNGQGDDAENMVKEMVENGITPDD------------STYISLIEGLTTEDERA 441



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 125/278 (44%), Gaps = 10/278 (3%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFD---EMGRFGFTPNT 154
           G+ +T       +   G  +   T+ L +   +   M G   EA++   EMG  G  P+ 
Sbjct: 158 GKLDTALLYRDRMVERGVAMTVATYNLLVHALF---MDGRGTEAYELVEEMGGKGLAPDV 214

Query: 155 FARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGM 210
           F  NI+++   K G V   +++ +           +++   +  L K   V     +   
Sbjct: 215 FTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDE 274

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
            VR+G  P++ ++  L+N     G I  A++++G M     +     +  L+ G   L R
Sbjct: 275 AVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGR 334

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           +D A  L ++M + G  P++VTY +LI G+        A    + + ++G  P L+ +N 
Sbjct: 335 VDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNA 394

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           LI  L K G  DDA ++   ++E  + PD  T+ SL+ 
Sbjct: 395 LIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIE 432



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/245 (21%), Positives = 102/245 (41%), Gaps = 4/245 (1%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           + GR      +V E+   G      T+ + +  + +       LE F+ M R G      
Sbjct: 191 MDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVV 250

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
               ++  L K G+V    K+  E       P+ + +N  + +     ++    +++G M
Sbjct: 251 TYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 310

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
            +K   P+   +  L+   C +GR+ EA +L+  M   G    +  +  LI G+     +
Sbjct: 311 EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDV 370

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
             A  +  +M+  G +P ++TY +LI+G  +      A + +  +   G  PD   +  L
Sbjct: 371 KDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISL 430

Query: 332 IDCLS 336
           I+ L+
Sbjct: 431 IEGLT 435


>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Vitis vinifera]
 gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 123/531 (23%), Positives = 228/531 (42%), Gaps = 35/531 (6%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           +GRFE  R +  ++   GC     +F + +R Y R  +    LE  D MG FG  PN   
Sbjct: 164 SGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVI 223

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNI---ALCNLCKLNDVSNVKDVIG 209
            N ++    + GR +   ++++  +     P+ ++FN    ALC+  K+ + S +   + 
Sbjct: 224 YNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQ 283

Query: 210 MMVRKGF-YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRL 268
           +    G   PN+  F ++L  FCK G + EA  L+  M   G  + + ++ + + G  R 
Sbjct: 284 IDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRN 343

Query: 269 RRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH 328
            +L  A    ++MV  G  PN+ ++ +++ G  +  + S A   + ++ S G  PD V +
Sbjct: 344 GKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTY 403

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV 388
           + L+      G    A ++   ++     P++YT   LL ++   GR     KL+  +  
Sbjct: 404 STLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNE 463

Query: 389 EA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT--------------------- 424
            +   D V  N ++   CK+G  ++AV++   M   G                       
Sbjct: 464 RSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKK 523

Query: 425 --PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI 482
             PD  ++  ++ GLC A ++DEA   +  +V  +   ++ ++   +    + G+   A 
Sbjct: 524 CLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAF 583

Query: 483 QLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
           ++ +          + +Y   I GL    +  E Y L   MK   + PN  TY  M+   
Sbjct: 584 RVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCL 643

Query: 543 CKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEM 593
           C+   IK    LL +++   I  +  +S RL    F   S    V ++ E+
Sbjct: 644 CEGGRIKDATSLLDEMLQKGISPNI-SSFRLLIKAFCKASDFGVVKEVFEI 693



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 111/477 (23%), Positives = 207/477 (43%), Gaps = 71/477 (14%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDV 207
           P  +  N+V++   +  +VD    + K+  +    P   + N+ +  LC      + ++V
Sbjct: 114 PPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREV 173

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
              M  KG  PN   F IL+  +C+ G    A +LL  M + G   +   +  LI  F R
Sbjct: 174 FDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCR 233

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA-KMFSIAFSFLDMLESEGHA---P 323
             R + A  L E+M ++G  P+VVT+ S I     A K+   +  F DM   E      P
Sbjct: 234 EGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRP 293

Query: 324 DLVFHNVLIDCLSKMGSYDDA---------------LDVYD----------GLLELKLV- 357
           ++   N++++   K G  ++A               L+ Y+           LLE +L  
Sbjct: 294 NITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLAL 353

Query: 358 ---------PDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA----DLVVYNALLSYFCK 404
                    P+ Y+F +++  +C +G  S   +++ GL + +    D V Y+ LL   C 
Sbjct: 354 KEMVDKGIEPNIYSFNTVMDGLCKNGLIS-DARMIMGLMISSGIGPDTVTYSTLLHGCCS 412

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV 464
            G   +A  + + M+ +G +P+ Y+   LL  L    +I EA  + Q +   +  ++   
Sbjct: 413 TGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVT 472

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIV-----------------------EKYPLDVVSYT 501
              ++D L ++G+  +A+++     +                       +K   D+++Y+
Sbjct: 473 CNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYS 532

Query: 502 VAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           + I GL + GR +EA   + +M   ++ P++  Y   + SFCK   I    R+L+D+
Sbjct: 533 IIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDM 589



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 90/359 (25%), Positives = 157/359 (43%), Gaps = 7/359 (1%)

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
           P V ++ ++L    +  ++     L   M+  G S       +LI G     R + A  +
Sbjct: 114 PPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREV 173

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
           ++KM   GC PN  ++  L++G+  A +   A   LD + S G  P+ V +N LI    +
Sbjct: 174 FDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCR 233

Query: 338 MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADL----- 392
            G  ++A  + + + E  L PD  TF S +S +C +G+     ++   ++++ +L     
Sbjct: 234 EGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRP 293

Query: 393 --VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
               +N +L  FCK G   +A  L  +M   G   +  S+   L GL    K+ EA    
Sbjct: 294 NITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLAL 353

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
           + +V      N +    ++D L + G    A  +    I      D V+Y+  + G    
Sbjct: 354 KEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCST 413

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
           G+  +A  +  +M      PN YT  ++L S  KE  I   ++LLQ + +   +LD  T
Sbjct: 414 GKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVT 472



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 95/407 (23%), Positives = 185/407 (45%), Gaps = 38/407 (9%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA---FDEMGRFGFTPN 153
           TG+      I+ E+ R GC     T  + L   W+    G + EA     +M    +  +
Sbjct: 413 TGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWK---EGRIFEAEKLLQKMNERSYDLD 469

Query: 154 TFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCK-----LNDVSNVKDVI 208
               NIV+D L K G++D  +++++      ++  + AL NL       ++  SN K  +
Sbjct: 470 NVTCNIVIDGLCKSGKLDEAVEIVEGM----WIHGSAALGNLGNSFIGLVDSSSNGKKCL 525

Query: 209 GMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA--WTVLIDGFR 266
                    P++  + I++N  CK GR+ EA +    M+  G SL  ++  +   I  F 
Sbjct: 526 ---------PDLITYSIIINGLCKAGRLDEARKKFIEMV--GKSLHPDSIIYDTFIHSFC 574

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
           +  ++  A  + + M + GC+ ++ TY SLI G          +  LD ++ +G  P++ 
Sbjct: 575 KHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNIC 634

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---- 382
            +N +I CL + G   DA  + D +L+  + P+  +F  L+   C +  F ++ ++    
Sbjct: 635 TYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFEIA 694

Query: 383 --VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
             +CG +     +++N LL      G  ++A +L++  LD+ F   N+ +  L+  LC  
Sbjct: 695 LSICGHKEALYSLMFNELLI----GGEVSEAKELFDAALDRCFDLGNFQYNDLIEKLCKD 750

Query: 441 RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
             ++ A ++   ++      +      ++D L + G+ H A +L  R
Sbjct: 751 EMLENASDILHKMIDKGYRFDPASFMPVIDGLGKRGKKHDADELAER 797



 Score = 46.6 bits (109), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 50/252 (19%), Positives = 110/252 (43%), Gaps = 13/252 (5%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           K++    ++ ++++MIS +    GR +    ++ E+ + G      +F L ++ + +   
Sbjct: 625 KEKGITPNICTYNNMISCLCE-GGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASD 683

Query: 135 YGMVLEAFD-EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET-----QLPNFLSF 188
           +G+V E F+  +   G     ++  ++ + L   G V    ++          L NF  +
Sbjct: 684 FGVVKEVFEIALSICGHKEALYS--LMFNELLIGGEVSEAKELFDAALDRCFDLGNF-QY 740

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           N  +  LCK   + N  D++  M+ KG+  +   F  +++   K G+  +A +L   M+ 
Sbjct: 741 NDLIEKLCKDEMLENASDILHKMIDKGYRFDPASFMPVIDGLGKRGKKHDADELAERMMD 800

Query: 249 LGTSLSV-NAWTVLIDGFRRLRRLDMAGYLWEKMVQ--NGCSPNVVTYTSLIKGFMEAKM 305
           + +   V N  T     F R +R   +G  W+ ++   +G    +     + KG+ +  +
Sbjct: 801 MASEGMVENKITRNESAFNRQKRNKFSGSDWQTIIHRDDGSGLALKALKRVQKGWGQGSI 860

Query: 306 FSIAFSFLDMLE 317
            S+     D L+
Sbjct: 861 SSLQPQKNDFLD 872


>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 159/322 (49%), Gaps = 10/322 (3%)

Query: 135 YGMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLS 187
           YG V+ A   F +M R G  PN    +++M+  FK G    G ++ +  +    +PN  +
Sbjct: 206 YGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYA 265

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           +N  +   C    V     V   M  KG    V  + IL+   C+  +  EA +L+  + 
Sbjct: 266 YNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVN 325

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
            +G S ++  + +LI+GF  + ++D A  L+ ++  +G SP +VTY +LI G+ + +  +
Sbjct: 326 KVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLA 385

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A   +  +E    AP  V + +LID  +++   + A +++  + +  LVPD YT+  L+
Sbjct: 386 GALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLI 445

Query: 368 STVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
             +C+ G      KL   L    ++ + V+YN ++  +CK G   +A++L N M+  G  
Sbjct: 446 HGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMV 505

Query: 425 PDNYSFVGLLRGLCGARKIDEA 446
           P+  SF   +  LC   K  EA
Sbjct: 506 PNVASFCSTIGLLCRDEKWKEA 527



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 96/384 (25%), Positives = 177/384 (46%), Gaps = 7/384 (1%)

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           F I++   C+ G   + ++LL ++   G S +V  +T LIDG  +   + +A  L+ KM 
Sbjct: 161 FGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMD 220

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
           + G  PN  TY+ L+ GF +  +    F   + ++  G  P+   +N LI      G  D
Sbjct: 221 RLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVD 280

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALL 399
            A  V+  + E  +     T+  L+  +C   +F    KLV  +    +  ++V YN L+
Sbjct: 281 KAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILI 340

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
           + FC  G  + AV+L+N +   G +P   ++  L+ G      +  A+++ + +     A
Sbjct: 341 NGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIA 400

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL--DVVSYTVAIRGLLEGGRTEEAY 517
            +   +T ++D         KA ++   +++EK  L  DV +Y+V I GL   G  +EA 
Sbjct: 401 PSKVTYTILIDAFARLNYTEKACEM--HSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEAS 458

Query: 518 ILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFI 577
            L+  +  + + PN+  Y  M+  +CKE +     RLL +++ + +  +  +       +
Sbjct: 459 KLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLL 518

Query: 578 FKFHSSSSAVNQLVEMCNLGLIPD 601
            +      A   L +M N GL P 
Sbjct: 519 CRDEKWKEAELLLGQMINSGLKPS 542



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 84/359 (23%), Positives = 164/359 (45%), Gaps = 3/359 (0%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           PN + +   +   CK  +V   K++   M R G  PN   + +L+N F K G   E +Q+
Sbjct: 191 PNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQM 250

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
              M   G   +  A+  LI  +     +D A  ++ +M + G +  V+TY  LI G   
Sbjct: 251 YENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCR 310

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
            K F  A   +  +   G +P++V +N+LI+    +G  D A+ +++ L    L P   T
Sbjct: 311 GKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVT 370

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
           + +L++        +    LV  +E   +    V Y  L+  F +  +  +A ++++ M 
Sbjct: 371 YNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLME 430

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
             G  PD Y++  L+ GLC    + EA  +++ +   +   N+ ++  ++    + G  +
Sbjct: 431 KSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSY 490

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
           +A++L    +      +V S+   I  L    + +EA +L  QM +  + P+   Y+++
Sbjct: 491 RALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMV 549



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 79/380 (20%), Positives = 156/380 (41%), Gaps = 33/380 (8%)

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
           +++ ++N +       +A   L  MI  G     N +  L+    R    D A +++ ++
Sbjct: 91  LYDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNEL 150

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
            ++    +  ++  +IKG  EA  F   F  L MLE  G +P++V +  LID   K G+ 
Sbjct: 151 -KSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNV 209

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSY 401
             A +++  +  L LVP+ +T                                Y+ L++ 
Sbjct: 210 MLAKNLFCKMDRLGLVPNPHT--------------------------------YSVLMNG 237

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVN 461
           F K G   +  ++Y  M   G  P+ Y++  L+   C    +D+A  V+  +     A  
Sbjct: 238 FFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACG 297

Query: 462 AHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYS 521
              +  ++  L    +  +A++L  +        ++V+Y + I G  + G+ + A  L++
Sbjct: 298 VMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFN 357

Query: 522 QMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFH 581
           Q+K   + P   TY  ++  + K  N+     L++++ +  I     T   L     + +
Sbjct: 358 QLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLN 417

Query: 582 SSSSAVNQLVEMCNLGLIPD 601
            +  A      M   GL+PD
Sbjct: 418 YTEKACEMHSLMEKSGLVPD 437



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/314 (22%), Positives = 138/314 (43%), Gaps = 4/314 (1%)

Query: 293 YTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
           Y +++  ++ +     A +FL  +  EGH P     N L+  L +   +D A  +++  L
Sbjct: 92  YDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNE-L 150

Query: 353 ELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPN 409
           + K+V D+Y+F  ++   C +G F    +L+  LE   +  ++V+Y  L+   CK G   
Sbjct: 151 KSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVM 210

Query: 410 QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
            A  L+  M   G  P+ +++  L+ G        E   +Y+ +  +    NA+ +  ++
Sbjct: 211 LAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLI 270

Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
                 G   KA ++F     +     V++Y + I GL  G +  EA  L  ++  + + 
Sbjct: 271 SEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLS 330

Query: 530 PNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQ 589
           PN  TY +++  FC    +    RL   +  + +     T   L     K  + + A++ 
Sbjct: 331 PNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDL 390

Query: 590 LVEMCNLGLIPDEM 603
           + EM    + P ++
Sbjct: 391 VKEMEERCIAPSKV 404



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/233 (20%), Positives = 106/233 (45%), Gaps = 4/233 (1%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G  +    +  E+   G      T+ + +    RG+ +G  ++   ++ + G +PN    
Sbjct: 277 GMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTY 336

Query: 158 NIVMDVLFKIGRVDLGIKV---LKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           NI+++    +G++D  +++   LK + L P  +++N  +    K+ +++   D++  M  
Sbjct: 337 NILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEE 396

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +   P+   + IL++ F ++    +A ++  LM   G    V  ++VLI G      +  
Sbjct: 397 RCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKE 456

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
           A  L++ + +    PN V Y ++I G+ +      A   L+ +   G  P++ 
Sbjct: 457 ASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVA 509



 Score = 45.4 bits (106), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 37/200 (18%), Positives = 80/200 (40%), Gaps = 4/200 (2%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G+ +T   +  +L   G      T+   +  Y + E     L+   EM      P+    
Sbjct: 347 GKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTY 406

Query: 158 NIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
            I++D   ++   +   ++     K   +P+  ++++ +  LC   ++     +   +  
Sbjct: 407 TILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGE 466

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
               PN  ++  +++ +CK G    A +LL  M+  G   +V ++   I    R  +   
Sbjct: 467 MHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKE 526

Query: 274 AGYLWEKMVQNGCSPNVVTY 293
           A  L  +M+ +G  P+V  Y
Sbjct: 527 AELLLGQMINSGLKPSVSLY 546


>gi|326499175|dbj|BAK06078.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 566

 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 88/343 (25%), Positives = 167/343 (48%), Gaps = 10/343 (2%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE-----TQLPNFLSFNIALCNLCKL 198
           +  +FG +   +A N +MD+    GRV   + + +         P+  SFN+ +  +CK+
Sbjct: 188 KASQFGCSIEAYAYNKLMDLFIGHGRVQDAVALFEGWIQGGVYSPDVWSFNVVIKGVCKV 247

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL-SVNA 257
            DV    +++  M   G  P+     IL+N  C+   +++  ++L  +   G  + +V  
Sbjct: 248 GDVQKALELVERMDEFGCSPDTVTHNILVNGLCRAKEVSKGREVLRRLQRDGVCMPNVVT 307

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T +I G+ +  R++ A  ++  MV  G SPNVVTY  LI G+ +A     A +    + 
Sbjct: 308 YTSVISGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMI 367

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-- 375
                PD+V  + LID   + G  DDA+ ++  + +  + P+++TFC ++ T C   R  
Sbjct: 368 LRRCLPDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCKQNRSG 427

Query: 376 --FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
                L K+    ++     +YN ++   CK G  ++A  +   M +KG  PD Y++  L
Sbjct: 428 EALHFLKKMNMRTDIAPQAFIYNPVIDVLCKGGKVDEANMILIEMEEKGCRPDKYTYTIL 487

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
           + G C   +I EA+  +  +V    + ++ V  + +  L+++G
Sbjct: 488 IIGHCMKGRIAEAVTFFHKMVETGCSPDSIVVNSFISCLLKSG 530



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 94/405 (23%), Positives = 180/405 (44%), Gaps = 16/405 (3%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMV-RKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
           P+  S+   +  +C+    ++   +   M  + G++PN R    L       G +  A  
Sbjct: 125 PSAHSYRYVISLMCQSGRHTDALQLFDQMTDQSGYFPNARFLSFLSGSCAAAGLLDAAAA 184

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGC-SPNVVTYTSLIKGF 300
           LL      G S+   A+  L+D F    R+  A  L+E  +Q G  SP+V ++  +IKG 
Sbjct: 185 LLSKASQFGCSIEAYAYNKLMDLFIGHGRVQDAVALFEGWIQGGVYSPDVWSFNVVIKGV 244

Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL-VPD 359
            +      A   ++ ++  G +PD V HN+L++ L +        +V   L    + +P+
Sbjct: 245 CKVGDVQKALELVERMDEFGCSPDTVTHNILVNGLCRAKEVSKGREVLRRLQRDGVCMPN 304

Query: 360 SYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYN 416
             T+ S++S  C +GR      +   +  +    ++V YN L++ + KAG    AV +Y 
Sbjct: 305 VVTYTSVISGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQ 364

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
            M+ +   PD  +F  L+ G C   ++D+A+ ++  +   +   NAH    I+    +  
Sbjct: 365 QMILRRCLPDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCKQN 424

Query: 477 RCHKAIQLFRRAIVEKYPLDVVS----YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
           R  +A+   ++  +     D+      Y   I  L +GG+ +EA ++  +M+     P+ 
Sbjct: 425 RSGEALHFLKKMNMRT---DIAPQAFIYNPVIDVLCKGGKVDEANMILIEMEEKGCRPDK 481

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFI 577
           YTY ++++  C +  I         +++     D   SI +  FI
Sbjct: 482 YTYTILIIGHCMKGRIAEAVTFFHKMVETGCSPD---SIVVNSFI 523



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 128/283 (45%), Gaps = 11/283 (3%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ-----LPNFLSFNIAL 192
            LE  + M  FG +P+T   NI+++ L +   V  G +VL+  Q     +PN +++   +
Sbjct: 253 ALELVERMDEFGCSPDTVTHNILVNGLCRAKEVSKGREVLRRLQRDGVCMPNVVTYTSVI 312

Query: 193 CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
              CK   + +   V   MV  G  PNV  + +L+N + K G +  A  +   MI     
Sbjct: 313 SGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMILRRCL 372

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
             V  ++ LIDG+ R  +LD A  +W +M Q    PN  T+  +I  F +      A  F
Sbjct: 373 PDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCKQNRSGEALHF 432

Query: 313 LDMLESEGH-APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
           L  +      AP    +N +ID L K G  D+A  +   + E    PD YT+  L+   C
Sbjct: 433 LKKMNMRTDIAPQAFIYNPVIDVLCKGGKVDEANMILIEMEEKGCRPDKYTYTILIIGHC 492

Query: 372 LSGRF----SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQ 410
           + GR     +   K+V       D +V N+ +S   K+G P +
Sbjct: 493 MKGRIAEAVTFFHKMV-ETGCSPDSIVVNSFISCLLKSGMPGE 534



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 72/303 (23%), Positives = 127/303 (41%), Gaps = 15/303 (4%)

Query: 310 FSFLDMLESE-GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           FS L    S+    P    +  +I  + + G + DAL ++D + +      +  F S LS
Sbjct: 111 FSALHSPHSQLAMPPSAHSYRYVISLMCQSGRHTDALQLFDQMTDQSGYFPNARFLSFLS 170

Query: 369 TVCLSGRF--------SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
             C +           S   +  C +E  A    YN L+  F   G    AV L+   + 
Sbjct: 171 GSCAAAGLLDAAAALLSKASQFGCSIEAYA----YNKLMDLFIGHGRVQDAVALFEGWIQ 226

Query: 421 KG-FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
            G ++PD +SF  +++G+C    + +A+ + + +     + +   H  +V+ L  A    
Sbjct: 227 GGVYSPDVWSFNVVIKGVCKVGDVQKALELVERMDEFGCSPDTVTHNILVNGLCRAKEVS 286

Query: 480 KAIQLFRRAIVEKYPL-DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
           K  ++ RR   +   + +VV+YT  I G  + GR E+A  +Y+ M  +   PN  TY V+
Sbjct: 287 KGREVLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVL 346

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGL 598
           +  + K  N+     + Q +I  R   D  T   L     +      A+    EM    +
Sbjct: 347 INGYGKAGNMGSAVAVYQQMILRRCLPDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHI 406

Query: 599 IPD 601
            P+
Sbjct: 407 QPN 409



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 90/214 (42%), Gaps = 5/214 (2%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
            GR E    +  ++  VG      T+ + +  Y +    G  +  + +M      P+   
Sbjct: 318 AGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMILRRCLPDVVT 377

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMM- 211
            + ++D   + G++D  +K+  E       PN  +F I +   CK N        +  M 
Sbjct: 378 FSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCKQNRSGEALHFLKKMN 437

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
           +R    P   ++  +++  CK G++ EA  +L  M   G       +T+LI G     R+
Sbjct: 438 MRTDIAPQAFIYNPVIDVLCKGGKVDEANMILIEMEEKGCRPDKYTYTILIIGHCMKGRI 497

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
             A   + KMV+ GCSP+ +   S I   +++ M
Sbjct: 498 AEAVTFFHKMVETGCSPDSIVVNSFISCLLKSGM 531



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 66/316 (20%), Positives = 133/316 (42%), Gaps = 14/316 (4%)

Query: 288 PNVVTYTSLIKGFMEAKMFSIAFSFLD-MLESEGHAPDLVFHNVLIDCLSKMGSYDDALD 346
           P+  +Y  +I    ++   + A    D M +  G+ P+  F + L    +  G  D A  
Sbjct: 125 PSAHSYRYVISLMCQSGRHTDALQLFDQMTDQSGYFPNARFLSFLSGSCAAAGLLDAAAA 184

Query: 347 VYDGLLELKLVPDSYTFCSLLSTVCLSGRF----SLLPKLVCGLEVEADLVVYNALLSYF 402
           +     +     ++Y +  L+      GR     +L    + G     D+  +N ++   
Sbjct: 185 LLSKASQFGCSIEAYAYNKLMDLFIGHGRVQDAVALFEGWIQGGVYSPDVWSFNVVIKGV 244

Query: 403 CKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ-----GIVMNN 457
           CK G   +A++L   M + G +PD  +   L+ GLC A+++ +   V +     G+ M N
Sbjct: 245 CKVGDVQKALELVERMDEFGCSPDTVTHNILVNGLCRAKEVSKGREVLRRLQRDGVCMPN 304

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAY 517
                  +T+++    +AGR   A+ ++   +      +VV+Y V I G  + G    A 
Sbjct: 305 VVT----YTSVISGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAV 360

Query: 518 ILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFI 577
            +Y QM      P+  T+  ++  +C+   +    ++  ++    I+ + HT   +    
Sbjct: 361 AVYQQMILRRCLPDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTF 420

Query: 578 FKFHSSSSAVNQLVEM 593
            K + S  A++ L +M
Sbjct: 421 CKQNRSGEALHFLKKM 436


>gi|297830178|ref|XP_002882971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328811|gb|EFH59230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 642

 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 129/519 (24%), Positives = 225/519 (43%), Gaps = 44/519 (8%)

Query: 65  IALSFFIWCAKQRDYFHDVQSFDHMISVV--TRLTGRF-----ETVRG------------ 105
           + + FF W  K+R++ HD  ++  +I  +   RL G       E VR             
Sbjct: 108 VKIQFFKWAGKRRNFQHDCSTYMALIRCLEEARLYGEMYRTIQEVVRNTYVSVGPVVLSE 167

Query: 106 IVGELARVGCVIKA----------------QTFLLFLRIYWRGEMYGMVLEAFDEMGRFG 149
           +V  L R   V KA                 T+   + +  +   +  V E + EM   G
Sbjct: 168 LVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEG 227

Query: 150 FT-PNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNV 204
              P+T   + ++    K+GR D  I++  E +     P    +   L    K+  V   
Sbjct: 228 DCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKA 287

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
            D+   M R G  P V  +  L+    K GR+ EAY L   M+T G +  V     L++ 
Sbjct: 288 LDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTDGLTPDVVFLNNLMNI 347

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM-FSIAFSFLDMLESEGHAP 323
             ++ RL+    ++ +M    C+P VV+Y ++IK   E+K   S   S+ D ++++G +P
Sbjct: 348 LGKVGRLEELTNVFNEMGTWRCTPTVVSYNTVIKALFESKAPVSEVSSWFDKMKADGVSP 407

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV 383
               +++LID   K    + AL + + + E    P    +CSL++ +  + R+    +L 
Sbjct: 408 SEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELF 467

Query: 384 CGLEVEADLV---VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
             L+     V   VY  ++ +F K G  ++AV L+N M ++G  PD Y++  L+ G+  A
Sbjct: 468 KELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKA 527

Query: 441 RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSY 500
             ++EA ++ + +  N    + + H  I++     G   +AI++F          D V+Y
Sbjct: 528 GMVNEANSLLRKMEENGCTADINSHNIILNGFARTGVPRRAIEMFETMKHCGIKPDGVTY 587

Query: 501 TVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
              +      G  EEA  L  +MK      +A TY  +L
Sbjct: 588 NTLLGCFAHAGMFEEAARLMREMKDKGFEYDAITYSSIL 626



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 98/402 (24%), Positives = 182/402 (45%), Gaps = 11/402 (2%)

Query: 78  DYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGM 137
           D F D  ++  +IS   +L GR ++   +  E+         + +   L IY++      
Sbjct: 228 DCFPDTITYSALISSYEKL-GRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEK 286

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALC 193
            L+ F+EM R G +P  +    ++  L K GRV    DL   +L +   P+ +  N  + 
Sbjct: 287 ALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTDGLTPDVVFLNNLMN 346

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC-FCKMGRIAEAYQLLGLMITLGTS 252
            L K+  +  + +V   M      P V  +  ++   F     ++E       M   G S
Sbjct: 347 ILGKVGRLEELTNVFNEMGTWRCTPTVVSYNTVIKALFESKAPVSEVSSWFDKMKADGVS 406

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS- 311
            S   +++LIDG+ +  R++ A  L E+M + G  P    Y SLI    +AK +  A   
Sbjct: 407 PSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANEL 466

Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
           F ++ E+ G+    V+  V+I    K G   +A+D+++ +      PD Y + +L+S + 
Sbjct: 467 FKELKENFGNVSSRVYA-VMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMV 525

Query: 372 LSGRFSLLPKLVCGLEVE---ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
            +G  +    L+  +E     AD+  +N +L+ F + G P +A++++ TM   G  PD  
Sbjct: 526 KAGMVNEANSLLRKMEENGCTADINSHNIILNGFARTGVPRRAIEMFETMKHCGIKPDGV 585

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
           ++  LL     A   +EA  + + +       +A  +++I+D
Sbjct: 586 TYNTLLGCFAHAGMFEEAARLMREMKDKGFEYDAITYSSILD 627



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/294 (22%), Positives = 137/294 (46%), Gaps = 6/294 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM-YGMVLE 140
           DV   +++++++ ++ GR E +  +  E+    C     ++   ++  +  +     V  
Sbjct: 337 DVVFLNNLMNILGKV-GRLEELTNVFNEMGTWRCTPTVVSYNTVIKALFESKAPVSEVSS 395

Query: 141 AFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLND 200
            FD+M   G +P+ F  +I++D   K  RV+  + +L+E     F     A C+L     
Sbjct: 396 WFDKMKADGVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALG 455

Query: 201 VSNVKDVIGMMVR--KGFYPNV--RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
            +   +    + +  K  + NV  R++ +++  F K G+++EA  L   M   G+   V 
Sbjct: 456 KAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVY 515

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
           A+  L+ G  +   ++ A  L  KM +NGC+ ++ ++  ++ GF    +   A    + +
Sbjct: 516 AYNALMSGMVKAGMVNEANSLLRKMEENGCTADINSHNIILNGFARTGVPRRAIEMFETM 575

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
           +  G  PD V +N L+ C +  G +++A  +   + +     D+ T+ S+L  V
Sbjct: 576 KHCGIKPDGVTYNTLLGCFAHAGMFEEAARLMREMKDKGFEYDAITYSSILDAV 629



 Score = 39.7 bits (91), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 35/171 (20%), Positives = 73/171 (42%), Gaps = 3/171 (1%)

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           L++ L  A+ + +A++V+           +  + +++  L++ G+  K  +++     E 
Sbjct: 168 LVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEG 227

Query: 493 --YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
             +P D ++Y+  I    + GR + A  L+ +MK   + P    Y  +L  + K   ++ 
Sbjct: 228 DCFP-DTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEK 286

Query: 551 VKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
              L +++  A      +T   L K + K      A +    M   GL PD
Sbjct: 287 ALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTDGLTPD 337


>gi|77552391|gb|ABA95188.1| salt-inducible protein, putative [Oryza sativa Japonica Group]
          Length = 938

 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 126/505 (24%), Positives = 229/505 (45%), Gaps = 19/505 (3%)

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
           + R+G V    T+ L L+       Y MVL A++EM  F  TP+ +   IV   LF+  +
Sbjct: 298 ICRLGVVPSVWTWNLLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKK 357

Query: 170 VDLGIKVLKE-TQL---PN---FLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
           VD  ++V  E T++   P+   + SF I LC+ C   D++ V  ++  + R+        
Sbjct: 358 VDEALQVWAEMTEMGVKPDARGYSSFLIGLCD-CGKYDLAYV--ILQEINREKVPVEAMA 414

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           + ++++  CK  R+ EA +LL      G++  V  ++ LI  + ++  L  A   +E MV
Sbjct: 415 YNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMV 474

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
            +G   N    + L++ F +  M S A ++    +  G   D V +N+ +D   K G+ +
Sbjct: 475 SHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMN 534

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALL 399
           +A+ + + +    L PD   +  L+S  CL G      ++   +    +E D+V YN L 
Sbjct: 535 EAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILA 594

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA---INVYQGIVMN 456
           S FCK+G   +   L + M D+G  P++ ++   + G C    + EA    NV +   ++
Sbjct: 595 SGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGID 654

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
           +  V   +++++V   + +G    A  LF R   +   +D  S +  I  L   G  + A
Sbjct: 655 HIEV---MYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGA 711

Query: 517 YILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKF 576
             +   M    V P+  +Y  ++  +C+  ++        D++   + +D      L   
Sbjct: 712 SNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNG 771

Query: 577 IFKFHSSSSAVNQLVEMCNLGLIPD 601
             K      A    V+M NLG+ PD
Sbjct: 772 YCKAGRLQEACQLFVQMTNLGIKPD 796



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 129/547 (23%), Positives = 235/547 (42%), Gaps = 32/547 (5%)

Query: 82  DVQSFDHMISVVTR---LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMV 138
           DV +F    ++VTR      + +    +  E+  +G    A+ +  FL        Y + 
Sbjct: 341 DVYTF----AIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLA 396

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCN 194
                E+ R        A N+VMD L K  R+D   K+L    ++   P+   ++  + +
Sbjct: 397 YVILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRS 456

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
            CK+ ++ N  D    MV  G   N  +   LL CF K+G  +EA          G  L 
Sbjct: 457 YCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLD 516

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF-MEAKMFSIAFSFL 313
              + + +D + +   ++ A  L  +M   G +P+ + YT LI G+ ++ +M +    F 
Sbjct: 517 KVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFE 576

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           +ML++    PD+V +N+L     K G   +  D+ D + +  L P+S T+   +   C  
Sbjct: 577 EMLKANIE-PDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRG 635

Query: 374 GRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           G  S    L   +E   ++   V+Y++++  +  +G+ + A  L+  +  +G   D++S 
Sbjct: 636 GNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSC 695

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             L+  LC    +  A NV + ++ ++   +   ++ ++    + G   KA   F   + 
Sbjct: 696 SKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQ 755

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML----------- 539
               +DV+ YT+ + G  + GR +EA  L+ QM ++ + P+   Y V+L           
Sbjct: 756 RGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQG 815

Query: 540 -LSFCKERNIKMVK----RLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMC 594
                KER   +++    +LL  + D +IE D      L     K      A     EM 
Sbjct: 816 WEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEML 875

Query: 595 NLGLIPD 601
             GL PD
Sbjct: 876 QKGLTPD 882



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 112/442 (25%), Positives = 198/442 (44%), Gaps = 31/442 (7%)

Query: 136 GMVLEAFDEMGRF---GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSF 188
           GM  EA     +F   G   +    NI MD   K G ++  +K+L E +     P+ + +
Sbjct: 496 GMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHY 555

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
              +   C   ++ N + V   M++    P++  + IL + FCK G + E + LL  M  
Sbjct: 556 TCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMAD 615

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
            G   +   + + I GF R   L  A  L+  + + G     V Y+S++ G++ +     
Sbjct: 616 QGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDH 675

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A+     +  +G+  D    + LI+ L ++G+   A +V   +LE  +VPD  ++  L+S
Sbjct: 676 AYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLIS 735

Query: 369 TVCLSG---RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
             C +G   +  L    +    +  D++VY  L++ +CKAG   +A +L+  M + G  P
Sbjct: 736 IYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKP 795

Query: 426 DNYSFVGLLRGLCGARKIDEAINV-YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           D  ++  LL G      + E +   ++GI     +            L+ A   +K +  
Sbjct: 796 DVIAYTVLLDG-----HLKETLQQGWEGIAKERRSF-----------LLRANH-NKLLSS 838

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
            +   +E    DV  YTV I G  +     EA  L+ +M    + P+AY Y  ++  +C 
Sbjct: 839 MKDMQIEP---DVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCS 895

Query: 545 ERNIKMVKRLLQDVIDARIELD 566
           +  I   + LLQ++ID  IE D
Sbjct: 896 QGEISKAEDLLQEMIDKGIEPD 917



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 73/330 (22%), Positives = 150/330 (45%), Gaps = 3/330 (0%)

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           L+  + + G  P+V T+  L+K   E   + +  +  + ++     PD+    ++   L 
Sbjct: 294 LFSGICRLGVVPSVWTWNLLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLF 353

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL---LPKLVCGLEVEADLV 393
           +    D+AL V+  + E+ + PD+  + S L  +C  G++ L   + + +   +V  + +
Sbjct: 354 QAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAM 413

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            YN ++   CK    ++A KL      +G  PD Y +  L+R  C    +  A++ Y+ +
Sbjct: 414 AYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAM 473

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
           V +    N H+ + ++    + G   +AI  F +       LD V Y +A+    + G  
Sbjct: 474 VSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNM 533

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
            EA  L ++MK+  + P+   Y  ++  +C +  ++  +++ ++++ A IE D  T   L
Sbjct: 534 NEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNIL 593

Query: 574 TKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
                K        + L  M + GL P+ +
Sbjct: 594 ASGFCKSGLVMEVFDLLDRMADQGLEPNSL 623



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 79/348 (22%), Positives = 157/348 (45%), Gaps = 26/348 (7%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFL 186
           +GEM     + F+EM +    P+    NI+     K G V    DL  ++  +   PN L
Sbjct: 565 KGEMQN-AQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSL 623

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           ++ IA+   C+  ++S  + +  ++  KG      M+  ++  +   G    AY L   +
Sbjct: 624 TYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRV 683

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME-AKM 305
              G  +   + + LI+   R+  +  A  + + M+++   P+V++Y+ LI  + +   M
Sbjct: 684 ARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDM 743

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
                 F DM++  G + D++ + +L++   K G   +A  ++  +  L + PD   +  
Sbjct: 744 DKAHLWFHDMVQ-RGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTV 802

Query: 366 LLS-------------------TVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAG 406
           LL                    +  L    + L   +  +++E D+  Y  L+   CKA 
Sbjct: 803 LLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAE 862

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           +  +A +L++ ML KG TPD Y++  L+ G C   +I +A ++ Q ++
Sbjct: 863 YLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMI 910



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 112/256 (43%), Gaps = 25/256 (9%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCK 197
           F  + R G   + F+ + +++ L ++G V     V    L+   +P+ +S++  +   C+
Sbjct: 680 FVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQ 739

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
             D+         MV++G   +V ++ IL+N +CK GR+ EA QL   M  LG    V A
Sbjct: 740 NGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIA 799

Query: 258 WTVLIDGFRRLRRLDMAGY------------------LWEKMVQNGCSPNVVTYTSLIKG 299
           +TVL+DG   L+     G+                  L   M      P+V  YT LI G
Sbjct: 800 YTVLLDG--HLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDG 857

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
             +A+    A    D +  +G  PD   +  LI+     G    A D+   +++  + PD
Sbjct: 858 KCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPD 917

Query: 360 SYTFCSLLSTVCLSGR 375
             TF S+L+   L  R
Sbjct: 918 ELTF-SVLNQSSLRSR 932



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 59/237 (24%), Positives = 108/237 (45%), Gaps = 9/237 (3%)

Query: 368 STVCL-SGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
           +T+CL SG        +C L V   +  +N LL +  + G     +  YN M     TPD
Sbjct: 290 ATICLFSG--------ICRLGVVPSVWTWNLLLKFIAETGEYEMVLAAYNEMKCFQLTPD 341

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
            Y+F  + R L  A+K+DEA+ V+  +       +A  +++ +  L + G+   A  + +
Sbjct: 342 VYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQ 401

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
               EK P++ ++Y + + GL +  R +EA  L          P+ Y Y  ++ S+CK  
Sbjct: 402 EINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMG 461

Query: 547 NIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           N+       + ++   IE + H    L +   K   +S A+   ++  + GL  D++
Sbjct: 462 NLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKV 518



 Score = 52.0 bits (123), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 49/229 (21%), Positives = 100/229 (43%), Gaps = 16/229 (6%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
           + D   DV S+  +IS+  +  G  +       ++ + G  +    + + +  Y +    
Sbjct: 720 EHDVVPDVISYSKLISIYCQ-NGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRL 778

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNL 195
               + F +M   G  P+  A  +++D   K         + KE +     SF +   N 
Sbjct: 779 QEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERR-----SF-LLRANH 832

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
            KL  +S++KD   M +     P+V  + +L++  CK   + EA +L   M+  G +   
Sbjct: 833 NKL--LSSMKD---MQIE----PDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDA 883

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
            A+T LI+G+     +  A  L ++M+  G  P+ +T++ L +  + ++
Sbjct: 884 YAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSVLNQSSLRSR 932


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 98/450 (21%), Positives = 201/450 (44%), Gaps = 42/450 (9%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFL 186
           +G+     +E    M + G  PN    N ++       +    I  LK+ +     P+ +
Sbjct: 243 KGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVV 302

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           ++N  +  LCK    +  + +   M ++G  P++  +  LL  +   G + E + LL LM
Sbjct: 303 TYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLM 362

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
           +  G     + + +LI  + +  ++D A  ++ KM Q+G +PNVVTY ++I    ++   
Sbjct: 363 VRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSV 422

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALD-------------------- 346
             A  + + +  EG  P+++ +  LI  L     +D A +                    
Sbjct: 423 DDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSI 482

Query: 347 ---------------VYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EV 388
                          ++D ++ + + P+  T+ +L+   CL+G+     KL+  +    +
Sbjct: 483 IHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGM 542

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
           + D V YN L++ +C+    + A+ L+  M+  G +P+  ++  +L+GL   R+   A  
Sbjct: 543 KPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKE 602

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           +Y GI  +   +    +  I+  L +     +A+++F+   +    L+  ++ + I  LL
Sbjct: 603 LYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 662

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
           + GR +EA  L+       + PN +TYR+M
Sbjct: 663 KVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 692



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 123/509 (24%), Positives = 215/509 (42%), Gaps = 49/509 (9%)

Query: 142 FDEMGRFG---FTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF----LSFNIALCN 194
           ++ M R G    TP      I++    + GR+DLG   L       F    ++F   L  
Sbjct: 72  YNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKG 131

Query: 195 LCKLNDVSNVKD-VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT---LG 250
           LC     S+  D V+  M      P+V    ILL   C   R  EA +LL +M      G
Sbjct: 132 LCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGG 191

Query: 251 TSLSVNAWTVLIDGF------------------RRL-----------------RRLDMAG 275
           ++  V ++T +I+GF                  RR+                 + +D A 
Sbjct: 192 SAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAM 251

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
            +   MV+NG  PN +TY S++ G+  ++    A  FL  + S+G  PD+V +N L+D L
Sbjct: 252 EVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYL 311

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG---RFSLLPKLVCGLEVEADL 392
            K G   +A  ++D + +  L PD  T+C+LL      G       L  L+    +  D 
Sbjct: 312 CKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDH 371

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
            V+N L+  + K    ++A+ +++ M   G  P+  ++  ++  LC +  +D+A+  ++ 
Sbjct: 372 HVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQ 431

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           ++      N  V+T+++  L    +  KA +L    +     L+ + +   I    + GR
Sbjct: 432 MIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGR 491

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
             E+  L+  M  I V PN  TY  ++  +C    +    +LL  +    ++ D  T   
Sbjct: 492 VIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNT 551

Query: 573 LTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           L     +      A+    EM + G+ P+
Sbjct: 552 LINGYCRVSRMDDALALFKEMVSSGVSPN 580



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/467 (21%), Positives = 203/467 (43%), Gaps = 7/467 (1%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCK 197
           + EM     +P+    + ++  L K   +D  ++VL    K   +PN +++N  L   C 
Sbjct: 219 YHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCS 278

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
                     +  M   G  P+V  +  L++  CK GR  EA ++   M   G    +  
Sbjct: 279 SEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIAT 338

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  L+ G+     L     L + MV+NG  P+   +  LI  + + +    A      + 
Sbjct: 339 YCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMR 398

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G  P++V +  +I  L K GS DDA+  ++ +++  L P+   + SL+ ++C+  ++ 
Sbjct: 399 QHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWD 458

Query: 378 LLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
              +L+  +    +  + + +N+++   CK G   ++ KL++ M+  G  P+  ++  L+
Sbjct: 459 KAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLI 518

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            G C A K+DEA  +   +       +   +  +++      R   A+ LF+  +     
Sbjct: 519 DGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVS 578

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
            ++++Y + ++GL    RT  A  LY  +          TY ++L   CK        R+
Sbjct: 579 PNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRM 638

Query: 555 LQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            Q++    ++L+  T   +   + K   +  A +  V   + GL+P+
Sbjct: 639 FQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPN 685



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 91/445 (20%), Positives = 179/445 (40%), Gaps = 72/445 (16%)

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
           + R G       F + +  Y + E     +  F +M + G  PN      V+ +L K G 
Sbjct: 362 MVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGS 421

Query: 170 VDLGI----KVLKETQLPNFLS-----------------------------------FNI 190
           VD  +    +++ E   PN +                                    FN 
Sbjct: 422 VDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNS 481

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            + + CK   V   + +  +MVR G  PNV  +  L++ +C  G++ EA +LL  M ++G
Sbjct: 482 IIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVG 541

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
                  +  LI+G+ R+ R+D A  L+++MV +G SPN++TY  +++G    +  + A 
Sbjct: 542 MKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 601

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
                +   G   +L  +N+++  L K    D+AL ++  L                   
Sbjct: 602 ELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNL------------------- 642

Query: 371 CLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
                        C  +++ +   +N ++    K G  ++A  L+      G  P+ +++
Sbjct: 643 -------------CLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTY 689

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             +   + G   ++E   ++  +  N   V++ +   IV  L++ G   +A         
Sbjct: 690 RLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDE 749

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEE 515
           + + L+  + ++ I  LL GG+ +E
Sbjct: 750 KHFSLEASTASLFI-DLLSGGKYQE 773



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/270 (21%), Positives = 115/270 (42%), Gaps = 11/270 (4%)

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG------RFSLLPKLVCGLEVEADLVVY 395
           +DA  V+D LL        Y     L+ V          R++ + +   G +V   +  Y
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAG-KVTPTVHTY 90

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN-VYQGIV 454
             L+   C+AG  +        ++ KGF  +  +F  LL+GLC  ++  +A++ V + + 
Sbjct: 91  GILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK---YPLDVVSYTVAIRGLLEGG 511
             +   +    T ++  L +  R  +A++L      ++      DVVSYT  I G  + G
Sbjct: 151 ELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEG 210

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSI 571
            +++AY  Y +M    + P+  TY  ++ + CK + +     +L  ++   +  +  T  
Sbjct: 211 DSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYN 270

Query: 572 RLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            +            A+  L +M + G+ PD
Sbjct: 271 SILHGYCSSEQPKEAIGFLKKMRSDGVEPD 300



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 101/257 (39%), Gaps = 15/257 (5%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           L G+ +    ++  +  VG      T+   +  Y R       L  F EM   G +PN  
Sbjct: 523 LAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNII 582

Query: 156 ARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
             NI++  LF   R     +L + + K        ++NI L  LCK N       +   +
Sbjct: 583 TYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 642

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVL-----IDGFR 266
                    R F I++    K+GR  EA  L     + G  L  N WT       I G  
Sbjct: 643 CLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNG--LVPNYWTYRLMAENIIGQG 700

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
            L  LD    L+  M  NGC+ +      +++  ++    + A ++L M++ +  + +  
Sbjct: 701 LLEELDQ---LFFSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEAS 757

Query: 327 FHNVLIDCLSKMGSYDD 343
             ++ ID LS  G Y +
Sbjct: 758 TASLFIDLLSG-GKYQE 773


>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
          Length = 667

 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 120/497 (24%), Positives = 209/497 (42%), Gaps = 44/497 (8%)

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
           + R G    A TF   +  Y R     +  + FD+M   GF  +  +   +++ L + GR
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 170 VDLGIKVLKETQLPN---FLSFNIALCNL------------------------------- 195
           +D  +++  E   P+   + +    LCN                                
Sbjct: 61  IDEAVELFGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDF 120

Query: 196 -CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
            C+       ++++  M  KG  P V     ++N +CK GR+++A ++L LM   G   +
Sbjct: 121 RCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPN 180

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           V  +  L+ GF    ++  A  L  KM   G +P+ VTY  LI+G         AF  L 
Sbjct: 181 VWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLR 240

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
           ++E +G   D   +N LI+ L K G  D A  ++D L    + P++ TF SL++ +C SG
Sbjct: 241 LMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSG 300

Query: 375 R----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           +    +  L K+V       D   Y++ + + CK     + +     ML K   P   ++
Sbjct: 301 KADIAWKFLEKMVSA-GCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNY 359

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMN--NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
             ++  L   R        +  +V +  NP V  +  T++    IE GR ++A  +    
Sbjct: 360 TIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYT-TSMRAYCIE-GRLNEAENVLMEM 417

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
                 +D ++Y   + G    G+T+ A  +  QM  +A  PN +TY ++L    + R +
Sbjct: 418 SKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLV 477

Query: 549 KMVKRLLQDVIDARIEL 565
           + V  L    +   IEL
Sbjct: 478 EDVLPLTPAGVWKAIEL 494



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 105/430 (24%), Positives = 188/430 (43%), Gaps = 19/430 (4%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+  +FN  +   C+ N V   +D+   M  +GF  +V  +  L+   C+ GRI EA +L
Sbjct: 8   PDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVEL 67

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
            G M        ++ +  L+ G     R +    +  +M + G  P+   Y +++     
Sbjct: 68  FGEM----DQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCR 123

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK-LVPDSY 361
            +    A   L  +  +G AP +V    +I+   K G   DAL V + L++L+   P+ +
Sbjct: 124 ERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLE-LMKLRGCKPNVW 182

Query: 362 TFCSLLSTVCLSGR----FSLLPKL-VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYN 416
           T+ +L+   C  G+     +LL K+  CG  V  D V YN L+   C  G    A +L  
Sbjct: 183 TYNALVQGFCNEGKVHKAMTLLNKMRACG--VNPDAVTYNLLIRGQCIDGHIESAFRLLR 240

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
            M   G   D Y++  L+  LC   + D+A +++  +       NA    ++++ L ++G
Sbjct: 241 LMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSG 300

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
           +   A +   + +      D  +Y+  I  L +   ++E      +M    V P+   Y 
Sbjct: 301 KADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYT 360

Query: 537 VMLLSFCKERNIKMVKRLLQDVIDARIELD---YHTSIRLTKFIFKFHSSSSAVNQLVEM 593
           +++    KERN  +V R   +++ +    D   Y TS+R      + +    A N L+EM
Sbjct: 361 IVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLN---EAENVLMEM 417

Query: 594 CNLGLIPDEM 603
              G+  D M
Sbjct: 418 SKNGVTVDTM 427



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 105/432 (24%), Positives = 181/432 (41%), Gaps = 26/432 (6%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNL 195
           E   EM   G  P       V++   K GR+   ++VL+  +L    PN  ++N  +   
Sbjct: 132 EMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGF 191

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
           C    V     ++  M   G  P+   + +L+   C  G I  A++LL LM   G     
Sbjct: 192 CNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQ 251

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
             +  LI+   +  R D A  L++ +   G  PN VT+ SLI G  ++    IA+ FL+ 
Sbjct: 252 YTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEK 311

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
           + S G  PD   ++  I+ L KM    + L     +L+  + P +  +  ++  +     
Sbjct: 312 MVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERN 371

Query: 376 FSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
           + L+ +    +       D+V Y   +  +C  G  N+A  +   M   G T D  ++  
Sbjct: 372 YGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNT 431

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD-----RLIE-------AGRCHK 480
           L+ G     + D A+++ + +       N   +  ++      RL+E       AG   K
Sbjct: 432 LMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAG-VWK 490

Query: 481 AIQ------LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
           AI+      LF      ++  +  +Y+  + G  E GRTEEA  L S MK  ++  N   
Sbjct: 491 AIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDI 550

Query: 535 YRVMLLSFCKER 546
           Y  ++  FCK +
Sbjct: 551 YTALVTCFCKSK 562



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 89/411 (21%), Positives = 178/411 (43%), Gaps = 19/411 (4%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNV 204
           G   + +  N +++ L K GR D    +    +     PN ++FN  +  LCK       
Sbjct: 246 GLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIA 305

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
              +  MV  G  P+   +   +   CKM    E    +G M+      S   +T++I  
Sbjct: 306 WKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHK 365

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
             + R   +    W +MV +GC+P+VVTYT+ ++ +      + A + L  +   G   D
Sbjct: 366 LLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVD 425

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVC 384
            + +N L+D  + +G  D A+ +   +  +  VP+ +T+            F LL  LV 
Sbjct: 426 TMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTY------------FILLRHLVR 473

Query: 385 GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
              VE  L +  A +    KA        L++ M    F P++ ++  +L G     + +
Sbjct: 474 MRLVEDVLPLTPAGV---WKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTE 530

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
           EA ++   +  ++ ++N  ++TA+V    ++ R   A  L    I   +   ++SY   +
Sbjct: 531 EATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLL 590

Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
            GL+  G+T++A  ++   +     P+   ++V++    K+ +  + + ++
Sbjct: 591 SGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMI 641



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 76/358 (21%), Positives = 150/358 (41%), Gaps = 42/358 (11%)

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           MV++G  P+  T+ SLI G+       +A    D +   G A D+V +  LI+ L + G 
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNA 397
            D+A++++  + +    PD + + +L+  +C + R     L+ + +  L        Y A
Sbjct: 61  IDEAVELFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
           ++ + C+     +A ++   M +KG  P   +   ++   C   ++ +A+ V + + +  
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 176

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG----------- 506
              N   + A+V      G+ HKA+ L  +        D V+Y + IRG           
Sbjct: 177 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAF 236

Query: 507 ----LLEG--------------------GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
               L+EG                    GRT++A  L+  ++   + PNA T+  ++   
Sbjct: 237 RLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGL 296

Query: 543 CKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           CK     +  + L+ ++ A    D +T     + + K   S   ++ + EM    + P
Sbjct: 297 CKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKP 354


>gi|225450630|ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial [Vitis vinifera]
 gi|296089757|emb|CBI39576.3| unnamed protein product [Vitis vinifera]
          Length = 586

 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 102/423 (24%), Positives = 197/423 (46%), Gaps = 9/423 (2%)

Query: 42  QDFPIILAPHIVHSTLLNCPSDLIALSFFIWCAK-QRDYFHDVQSFDHMISVVTRLTGRF 100
           + +P  L+P  V S +    +  +AL  F    K  R++ H+ +++  MI  +++    F
Sbjct: 93  KPWPQRLSPKRVVSMISRQQNLDLALQIFDHAGKFHRNFAHNYETYLAMIEKLSKARA-F 151

Query: 101 ETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIV 160
           E +  ++ +L +         F+  +R Y       + +  F  +  FG  P+  + N +
Sbjct: 152 EPMETLISQLHKSQIKCGENLFITVIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTL 211

Query: 161 MDVLFKIGRVDLGIKVLKETQ-----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG 215
           ++ L +  R DL   + K  +     +PN  + NI +  LCK ND+     V+  M   G
Sbjct: 212 LNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMG 271

Query: 216 FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAG 275
           F PNV  +  +L  +   G +  A ++ G ++  G       +T+L+DG+ +  R   A 
Sbjct: 272 FIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAV 331

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
            + ++M +N   PN VTY  +I+ + + K      + LD +  + + P       +ID L
Sbjct: 332 KVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDML 391

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA--DLV 393
            + G  + A +++  LL+    PD+    +L+  +C  G+     KL    E  +    +
Sbjct: 392 CEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDEFEKGSIPSTL 451

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            YNAL++  C+ G   +A +L++ M++KG  P+ +++  L++G C      E I V + +
Sbjct: 452 TYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEM 511

Query: 454 VMN 456
           + N
Sbjct: 512 LDN 514



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 65/315 (20%), Positives = 135/315 (42%), Gaps = 40/315 (12%)

Query: 285 GCSPNVVTYTSLIKGFMEAKMFS-IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
           G  P+V ++ +L+   ++ K F  +   F +  +  G  P++   N+L+  L K    D 
Sbjct: 200 GLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDA 259

Query: 344 ALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE----ADLVVYNALL 399
           A+ V + +  +  +P+  T+ ++L      G   +  + V G  ++     D   Y  L+
Sbjct: 260 AIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDM-VGARRVFGEILDRGWVPDPTTYTILM 318

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
             +CK G    AVK+ + M +    P++ ++  ++   C  +K  E +N+   ++     
Sbjct: 319 DGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYI 378

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD----------------------- 496
            ++ +   ++D L E G+   A +L+++ + +    D                       
Sbjct: 379 PSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKL 438

Query: 497 -----------VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
                       ++Y   I G+ EGG   EA  L+  M      PNA+TY +++  FCK 
Sbjct: 439 FDEFEKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKV 498

Query: 546 RNIKMVKRLLQDVID 560
            N +   R++++++D
Sbjct: 499 GNAREGIRVMEEMLD 513



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 100/227 (44%), Gaps = 5/227 (2%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GRF     ++ E+          T+ + +  Y + +  G VL   D+M    + P++   
Sbjct: 325 GRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALC 384

Query: 158 NIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
             V+D+L + G+V++      K+LK+   P+    +  +  LCK   V   + +      
Sbjct: 385 CRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDEF-E 443

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           KG  P+   +  L+   C+ G + EA +L   M+  G   +   + +LI GF ++     
Sbjct: 444 KGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNARE 503

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
              + E+M+ NGC PN  TY  L++G  E  +     + L M  S G
Sbjct: 504 GIRVMEEMLDNGCLPNKATYAILLEGLYELGLEGEVTNVLSMASSRG 550



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 73/326 (22%), Positives = 134/326 (41%), Gaps = 59/326 (18%)

Query: 289 NVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL-VFHNVLIDCLSKMGSYDD---A 344
           N  TY ++I+   +A+    AF  ++ L S+ H   +    N+ I  +   G       A
Sbjct: 134 NYETYLAMIEKLSKAR----AFEPMETLISQLHKSQIKCGENLFITVIRNYGFAGRPKLA 189

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCK 404
           +  +  +    L P   +F +LL+T+  + RF L+                  L+   C+
Sbjct: 190 IRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRFDLV-----------------HLMFKNCR 232

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV 464
             F              G  P+ ++   L++ LC    ID AI V + +       N   
Sbjct: 233 KKF--------------GIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVT 278

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
           +T I+   +  G    A ++F   +   +  D  +YT+ + G  + GR  +A  +  +M+
Sbjct: 279 YTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEME 338

Query: 525 HIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSS 584
              V PN  TY V++ ++CKE+    V  LL D+++                  K+  SS
Sbjct: 339 ENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEK-----------------KYIPSS 381

Query: 585 SAVNQLVEM-CNLGLIPD--EMWRKL 607
           +   ++++M C  G +    E+W+KL
Sbjct: 382 ALCCRVIDMLCEEGKVEVACELWKKL 407


>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
 gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
          Length = 603

 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 98/376 (26%), Positives = 167/376 (44%), Gaps = 40/376 (10%)

Query: 170 VDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
           VD+G++       PN ++F   +  LCK   +    +++  MV KG+ PNV     L++ 
Sbjct: 267 VDMGLE-------PNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDG 319

Query: 230 FCKMGRIAEAYQL-LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSP 288
            CK G   +A++L L L+ +     +V  +T +I G+ R  +L+ A  L  +M + G  P
Sbjct: 320 LCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVP 379

Query: 289 NVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVY 348
           N  TYT+LI G  +A  F  A+  ++++ SEG +P+L  +N +++ L K G   +A  + 
Sbjct: 380 NTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKML 439

Query: 349 DGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFP 408
           +   +  L PD +T                                YN L+S  CK    
Sbjct: 440 EDGFQNGLKPDKFT--------------------------------YNILMSEHCKQENI 467

Query: 409 NQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAI 468
            QA+ L+N ML  G  PD +S+  L+   C   ++ E+   ++  V          +T++
Sbjct: 468 RQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSM 527

Query: 469 VDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAV 528
           +      G    A++ F R        D ++Y   I GL +  + +EA  LY  M    +
Sbjct: 528 ICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGL 587

Query: 529 PPNAYTYRVMLLSFCK 544
            P   T   +   +CK
Sbjct: 588 VPCEVTRITLAYEYCK 603



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 136/625 (21%), Positives = 264/625 (42%), Gaps = 79/625 (12%)

Query: 6   KRSLFYTAQRTQILKTIISFKSIHQISSPKVCATTHQDFPIILAPHIVH----------- 54
           ++SL Y +  TQ+    IS   + ++ S  VC + +Q   + ++   +H           
Sbjct: 24  RKSLCYYSSSTQLQP--ISQTMVQRVCSL-VCESYNQHAHMRVSSQRLHFGIEVDFLTHE 80

Query: 55  ------STLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVG 108
                 ++L +    ++ LSFF W      + H ++ +   I     L G   + +    
Sbjct: 81  QAVSVVASLASDAGSMVTLSFFHWAIGYPKFRHFMRLY---IVCAMSLIGNRNSEKAC-- 135

Query: 109 ELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIG 168
           E+ R  C++++     F  +    E   MV+E  ++    G  PNT   N ++ V  ++G
Sbjct: 136 EVMR--CMVES-----FSEVGRLKEAVEMVIEMHNQ----GLVPNTRTLNWIIKVTSEMG 184

Query: 169 RVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFE 224
            V+    + +E  +    P+ +S+ + +   CK+ ++      + +M+ +GF  +   F 
Sbjct: 185 LVEYAELLFEEMCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFT 244

Query: 225 ILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN 284
           ++++ F   G    A      ++ +G   ++  +T +I+G  +   +  A  + E+MV  
Sbjct: 245 LIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGK 304

Query: 285 GCSPNVVTYTSLIKGFMEAKMFSIAFS-FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
           G  PNV T+TSLI G  +      AF  FL ++ SE H P+++ +  +I    +    + 
Sbjct: 305 GWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNR 364

Query: 344 ALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLS 400
           A  +   + E  LVP++ T+ +L+   C +G F     L+  +  E    +L  YNA+++
Sbjct: 365 AEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVN 424

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
             CK G   +A K+       G  PD +++  L+   C    I +A+             
Sbjct: 425 GLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQAL------------- 471

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
                 A+ +++++ G     IQ          P D+ SYT  I       R +E+ + +
Sbjct: 472 ------ALFNKMLKIG-----IQ----------P-DIHSYTTLIAVFCRENRMKESEMFF 509

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKF 580
            +   I + P   TY  M+  +C+E N+ +  +    + D     D  T   +   + K 
Sbjct: 510 EEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQ 569

Query: 581 HSSSSAVNQLVEMCNLGLIPDEMWR 605
                A +    M   GL+P E+ R
Sbjct: 570 SKRDEARSLYDSMIEKGLVPCEVTR 594



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/357 (21%), Positives = 153/357 (42%), Gaps = 10/357 (2%)

Query: 92  VVTRLTGRFETVRGI--VGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFG 149
           +++R +G+  T R +     L  +G       F   +    +        E  +EM   G
Sbjct: 246 IISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKG 305

Query: 150 FTPNTFARNIVMDVLFKIGRVDLGIK-----VLKETQLPNFLSFNIALCNLCKLNDVSNV 204
           + PN +    ++D L K G  +   +     V  E   PN L++   +   C+ + ++  
Sbjct: 306 WKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRA 365

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
           + ++  M  +G  PN   +  L++  CK G    AY L+ LM + G S ++  +  +++G
Sbjct: 366 EMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNG 425

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
             +  R+  A  + E   QNG  P+  TY  L+    + +    A +  + +   G  PD
Sbjct: 426 LCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPD 485

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVC 384
           +  +  LI    +     ++   ++  + + ++P + T+ S++   C  G  +L  K   
Sbjct: 486 IHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFH 545

Query: 385 GLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
            L       D + Y A++S  CK    ++A  LY++M++KG  P   + + L    C
Sbjct: 546 RLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVPCEVTRITLAYEYC 602


>gi|224136310|ref|XP_002326829.1| predicted protein [Populus trichocarpa]
 gi|222835144|gb|EEE73579.1| predicted protein [Populus trichocarpa]
          Length = 664

 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 132/556 (23%), Positives = 225/556 (40%), Gaps = 63/556 (11%)

Query: 48  LAPHIVHSTLLNC----PSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETV 103
           L+P I  +T         S   A  FF W A +  + HD +S+  M+ ++ R  G     
Sbjct: 21  LSPSISKTTFFQVLRFIASPPKAFEFFNW-ASRNGFAHDSRSYFMMLDILGR-NGNLNIA 78

Query: 104 RGIVGELARV--GCVIKAQTFL-LFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIV 160
           R  +  + R   G V     F    LR Y    ++   ++ F  M   G +P+    N +
Sbjct: 79  RNFLFSIERRSNGSVKIEDRFCNTLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSL 138

Query: 161 MDVLFKIGRVDLGIKVLKET-----QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG 215
           + +L K GR ++   V  E        P+  +FNI +   CK + V         M R  
Sbjct: 139 LLILLKRGRTNMAHSVFDEMCGTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFN 198

Query: 216 FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS--VNAWTVLIDGFRRLRRLDM 273
             P+V  +  L++  C+ G++  A+ ++  M+     LS  V  +T L+ G+   + +D 
Sbjct: 199 CEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDE 258

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD-MLESEGHAPDLVFHNVLI 332
           A  ++E+MV  G  PN +TY +LIKG  E + F      L   +   G  PD   +N L+
Sbjct: 259 ALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLM 318

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADL 392
           +     G++D+AL ++  + ELK+ PDS T+  L+  +C  G F    +L   L  E  L
Sbjct: 319 NAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDIL 378

Query: 393 V----------VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
           +           YN +  + CK G  ++A +++  ++ KG T D  S+  L+ G C    
Sbjct: 379 LRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKG-TQDPPSYKTLIIGHC---- 433

Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTV 502
                                          + G      +L    +   Y  D  +Y +
Sbjct: 434 -------------------------------KEGTFEAGYKLLLFMLRRDYVPDFETYVL 462

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
            I G L+ G    AY    +M   +  P    +  +L    K    +     +  +ID +
Sbjct: 463 LINGFLQKGEPILAYKTLERMLKSSYLPKTSVFHSILSELLKNDFARESASFVVLMIDRK 522

Query: 563 IELDYHTSIRLTKFIF 578
           I  + + S    + +F
Sbjct: 523 IRQNINLSTHTMRLLF 538


>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 874

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 111/473 (23%), Positives = 217/473 (45%), Gaps = 27/473 (5%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           R E V  +  ++   G   +  TF L +R            E FDEM   G  PN F   
Sbjct: 127 RVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFG 186

Query: 159 IVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
           I++    K G  D G+++L   +    LPN + +N  + + C+     + + ++  M  +
Sbjct: 187 ILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREE 246

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM-----ITLGTSLSVNAWTVLIDGFRRLR 269
           G  P++  F   ++  CK G++ +A ++   M     + L    S+  + +++ GF ++ 
Sbjct: 247 GLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSI-TYNLMLKGFCKVG 305

Query: 270 RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHN 329
            L+ A  L+E + +N    ++ +Y   ++G +    F  A + L  +  +G  P +  +N
Sbjct: 306 LLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYN 365

Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL--- 386
           +L+D L K+G   DA  +   +    + PD+ T+  LL   C  G+      L+  +   
Sbjct: 366 ILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRN 425

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
               +    N LL      G  ++A +L   M +KG+  D  +   ++ GLCG+ ++D+A
Sbjct: 426 NCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKA 485

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL-DVVSYTVAIR 505
           I + +G+ ++  A   ++  +              I L   +++E   L D+++Y+  + 
Sbjct: 486 IEIVKGMRVHGSAALGNLGNSY-------------IGLVDDSLIENNCLPDLITYSTLLN 532

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           GL + GR  EA  L+++M    + P++  Y + +  FCK+  I    R+L+D+
Sbjct: 533 GLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDM 585



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 104/438 (23%), Positives = 195/438 (44%), Gaps = 65/438 (14%)

Query: 152 PNTFARNIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDV 207
           PN+   N+++    K+G ++    L   + +   L +  S+NI L  L +       + V
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETV 348

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
           +  M+ KG  P++  + IL++  CK+G +++A  ++GLM   G S     +  L+ G+  
Sbjct: 349 LKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCS 408

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
           + ++D A  L ++M++N C PN  T   L+         S A   L  +  +G+  D V 
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVT 468

Query: 328 HNVLIDCLSKMGSYDDALD-----------------------VYDGLLELKLVPDSYTFC 364
            N+++D L   G  D A++                       V D L+E   +PD  T+ 
Sbjct: 469 CNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYS 528

Query: 365 SLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
           +LL+ +C +GRF+    L   + G +++ D + YN  + +FCK G  + A ++   M  K
Sbjct: 529 TLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKK 588

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
           G      ++  L+ GL    +I E                  +H  ++D + E G     
Sbjct: 589 GCHKSLETYNSLILGLGIKNQIFE------------------IH-GLMDEMREKG----- 624

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
                         ++ +Y  AI+ L EGG+ E+A  L  +M    + PN ++++ ++ +
Sbjct: 625 -----------ISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGA 673

Query: 542 FCKERNIKMVKRLLQDVI 559
           FCK  +  M + + +  +
Sbjct: 674 FCKVPDFDMAQEVFETAV 691



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 110/463 (23%), Positives = 198/463 (42%), Gaps = 37/463 (7%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDV 207
           P  +  N++++   +  RV+    + K+  L    P   +FN+ +  LC  + V   +++
Sbjct: 110 PGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAAREL 169

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
              M  KG  PN   F IL+  +CK G   +  +LL  M + G   +   +  ++  F R
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCR 229

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF-MEAKMFSIAFSFLDMLESEGHA---P 323
             R D +  L EKM + G  P++VT+ S I     E K+   +  F DM   E      P
Sbjct: 230 EGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF---SLLP 380
           + + +N+++    K+G  +DA  +++ + E   +    ++   L  +   G+F     + 
Sbjct: 290 NSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVL 349

Query: 381 KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
           K +    +   +  YN L+   CK G  + A  +   M   G +PD  ++  LL G C  
Sbjct: 350 KQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSV 409

Query: 441 RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSY 500
            K+D A ++ Q ++ NN   NA+    ++  L   GR  +A +L R+   + Y LD V+ 
Sbjct: 410 GKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTC 469

Query: 501 TVAIRGLLEGGRTEEAYILYSQMK-HIAVP----------------------PNAYTYRV 537
            + + GL   G  ++A  +   M+ H +                        P+  TY  
Sbjct: 470 NIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYST 529

Query: 538 MLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKF 580
           +L   CK       K L  +++  +++ D   S+    FI  F
Sbjct: 530 LLNGLCKAGRFAEAKTLFAEMMGEKLQPD---SLAYNIFIHHF 569



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/391 (23%), Positives = 177/391 (45%), Gaps = 20/391 (5%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G+ +  + ++ E+ R  C+  A T  + L   W         E   +M   G+  +T   
Sbjct: 410 GKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTC 469

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFY 217
           NI++D L   G +D  I+++K  ++      + AL NL      S +  V   ++     
Sbjct: 470 NIIVDGLCGSGELDKAIEIVKGMRVHG----SAALGNLGN----SYIGLVDDSLIENNCL 521

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
           P++  +  LLN  CK GR AEA  L   M+         A+ + I  F +  ++  A  +
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRV 581

Query: 278 WEKMVQNGCSPNVVTYTSLIKGF-MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
            + M + GC  ++ TY SLI G  ++ ++F I    +D +  +G +P++  +N  I  L 
Sbjct: 582 LKDMEKKGCHKSLETYNSLILGLGIKNQIFEI-HGLMDEMREKGISPNICTYNTAIQYLC 640

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL------VCGLEVEA 390
           + G  +DA ++ D +++  + P+ ++F  L+   C    F +  ++      +CG +   
Sbjct: 641 EGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVSICGQKEGL 700

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
             +++N LL+    AG   +A +L   +LD+GF    + +  L+  LC   +++ A  + 
Sbjct: 701 YSLMFNELLA----AGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGIL 756

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
             ++      +      ++D L + G   +A
Sbjct: 757 HKMIDKGYGFDPAALMPVIDGLGKMGNKKEA 787



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/177 (21%), Positives = 79/177 (44%), Gaps = 1/177 (0%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           PN  ++N A+  LC+   V +  +++  M++K   PNV  F+ L+  FCK+     A ++
Sbjct: 627 PNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEV 686

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
               +++        ++++ +      +L  A  L E ++  G       Y  L+    +
Sbjct: 687 FETAVSI-CGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCK 745

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
                +A   L  +  +G+  D      +ID L KMG+  +A +  + ++E+  V +
Sbjct: 746 KDELEVASGILHKMIDKGYGFDPAALMPVIDGLGKMGNKKEANNFAEKMMEMASVGE 802


>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
 gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
          Length = 1153

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/390 (25%), Positives = 175/390 (44%), Gaps = 6/390 (1%)

Query: 210 MMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLR 269
           +M   G   N   +  L+    K G  AEA ++   M+  G S SV  ++VL+  F + R
Sbjct: 168 VMREAGMSLNGYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKR 227

Query: 270 RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHN 329
            +D   +L  +M   G  PNV +YT  I+   +A  F  A+  L  +E  G  PD+V H 
Sbjct: 228 DVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHT 287

Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE 389
           V+I  L   G   DA DV+  +      PD  T+ +LL     SG    + ++   +  +
Sbjct: 288 VVIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVAD 347

Query: 390 A---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
               ++V Y A++   C+ G  ++A+ +++ M +KG +P+ YS+  L+ G   A   D A
Sbjct: 348 GYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRA 407

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
           + ++  +    P+ N + H   ++   ++G+  KAIQ +     +    DV +    +  
Sbjct: 408 LELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSS 467

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           L   GR   A  ++ ++K + V P+  TY +M+    K            D+++     D
Sbjct: 468 LARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPD 527

Query: 567 YHTSIRLTKFIFKFHSSSSA---VNQLVEM 593
                 L   ++K    + A    +QL EM
Sbjct: 528 VLALNSLIDTLYKGGKGNEAWKLFHQLKEM 557



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 116/498 (23%), Positives = 218/498 (43%), Gaps = 46/498 (9%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG 173
           G     +T+ + +  + +      VL   +EM   G  PN ++  I + VL +  R D  
Sbjct: 208 GISPSVRTYSVLMVSFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEA 267

Query: 174 IKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
            ++L + +     P+ ++  + +  LC    +S+ KDV   M      P+   +  LL+ 
Sbjct: 268 YQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYITLLDK 327

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
               G      ++   M+  G + ++ ++T ++D   ++ RLD A  ++++M + G SP 
Sbjct: 328 CGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPE 387

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
             +Y SLI GF++A MF  A    + + + G +P+   H + I+   K G    A+  Y+
Sbjct: 388 QYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYE 447

Query: 350 GLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVY----------- 395
            +    +VPD     ++LS++  SGR  +  ++   L+   V  D + Y           
Sbjct: 448 HMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKAS 507

Query: 396 ------------------------NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
                                   N+L+    K G  N+A KL++ + +    P N ++ 
Sbjct: 508 KADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYN 567

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            LL GL    K+ E +++ + +  +    N   +  ++D L + G  + AI +      +
Sbjct: 568 TLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEK 627

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
               D+ SY   + GL++  R EEA+ ++ QMK I  P  A T   +L SF K     ++
Sbjct: 628 GCTPDLSSYNTVMYGLIKEERFEEAFRMFCQMKKILAPDYA-TLCTILPSFVKN---GLM 683

Query: 552 KRLLQDVIDARIELDYHT 569
           K  L  V +  ++ D +T
Sbjct: 684 KEALHTVKEYILKADCNT 701



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 113/540 (20%), Positives = 228/540 (42%), Gaps = 13/540 (2%)

Query: 71  IWCAKQRDYFHD-VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIY 129
           IW A   D ++D + S+  ++  + ++ GR +    +  E+   G   +  ++   +  +
Sbjct: 340 IWNAMVADGYNDNIVSYTAVVDALCQV-GRLDEALAVFDEMKEKGISPEQYSYNSLISGF 398

Query: 130 WRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNF 185
            + +M+   LE F+ M   G +PN +   + ++   K G+    I+  +  +    +P+ 
Sbjct: 399 LKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDV 458

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGL 245
            + N  L +L +   +   K V   +   G  P+   + +++ C  K  +  EA      
Sbjct: 459 AAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSD 518

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           M+  G    V A   LID   +  + + A  L+ ++ +    P   TY +L+ G      
Sbjct: 519 MVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGK 578

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
                  L+ +    H P+L+ +N ++DCLSK G  + A+ +   + E    PD  ++ +
Sbjct: 579 VKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNT 638

Query: 366 LLSTVCLSGRFSLLPKLVCGLE--VEADLVVYNALLSYFCKAGFPNQA---VKLYNTMLD 420
           ++  +    RF    ++ C ++  +  D      +L  F K G   +A   VK Y  +L 
Sbjct: 639 VMYGLIKEERFEEAFRMFCQMKKILAPDYATLCTILPSFVKNGLMKEALHTVKEY--ILK 696

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
                D  SF  L+ G+     ++++I   + I      +N      ++  L +  +  +
Sbjct: 697 ADCNTDKSSFHSLMEGILNKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALE 756

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
           A QLF +       L   SY   IRGL++    + A  L+++MK +   P+ +TY ++L 
Sbjct: 757 AHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILD 816

Query: 541 SFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           +  K   I+ + R+  ++     E  Y T   +   + K      A++    + + G  P
Sbjct: 817 AMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSP 876



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/407 (22%), Positives = 181/407 (44%), Gaps = 41/407 (10%)

Query: 113  VGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDL 172
            +G  +K  ++   +R      +  +  + F EM R G  P+ F  N+++D + K  R++ 
Sbjct: 767  LGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEE 826

Query: 173  GIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLN 228
             ++V  E         ++++N  +  L K   +    D+   ++ +GF P    +  LL+
Sbjct: 827  MLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLD 886

Query: 229  CFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSP 288
               K G++ +A  L   M+  G   +   + +L++G R     +    ++EKMV+ G +P
Sbjct: 887  GLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINP 946

Query: 289  NVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVY 348
            ++ +YT LI     A   +   S+   L   G  PDL+ +N+LID L K    ++A+ ++
Sbjct: 947  DIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLF 1006

Query: 349  DGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFP 408
            + + +  +VP+ YT                                YN+L+ +  KAG  
Sbjct: 1007 NEMKKKGIVPNLYT--------------------------------YNSLILHLGKAGKA 1034

Query: 409  NQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAI 468
            ++A ++Y  +L KG+ P+ +++  L+RG   +   D A   Y  +     AV   + TA+
Sbjct: 1035 SEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTDNAYAAYDCV-----AVGVSLKTAL 1089

Query: 469  VDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
            +  L++    + A  LF          D  +Y + +  + +  R EE
Sbjct: 1090 ISGLVDENLINIAEGLFAEMKRRGCGPDQFTYNLILDAIGKSMRIEE 1136



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 135/615 (21%), Positives = 253/615 (41%), Gaps = 81/615 (13%)

Query: 32  SSPKVCATTHQDFPIILA----PHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFD 87
           S+P   A  H+      A      +VH  L + P    AL  F   A+Q    H  +S +
Sbjct: 54  SAPPAPARVHERRRAAGAGTGTESVVH-MLRSAPGPAEALELFTAAARQPTAVHTTESCN 112

Query: 88  HMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGR 147
           +M+ ++ R  GR       VG++A+V  +++ Q     +         G     F  +G 
Sbjct: 113 YMLELM-RAHGR-------VGDMAQVFDLMQKQIVKANV---------GTFATVFSGVGV 155

Query: 148 FGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP-NFLSFNIALCNLCKLNDVSNVKD 206
            G                 +    + + V++E  +  N  ++N  +  L K    +   +
Sbjct: 156 QG----------------GLRSAPVALPVMREAGMSLNGYTYNGLIYFLVKSGFDAEAME 199

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
           V   MV  G  P+VR + +L+  F K   +     LL  M   G   +V ++T+ I    
Sbjct: 200 VYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLG 259

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA----------------F 310
           +  R D A  +  KM  +GC P+VVT+T +I+   +A   S A                 
Sbjct: 260 QAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQKPDRV 319

Query: 311 SFLDMLE-------------------SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGL 351
           +++ +L+                   ++G+  ++V +  ++D L ++G  D+AL V+D +
Sbjct: 320 TYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEM 379

Query: 352 LELKLVPDSYTFCSLLSTVCLSGRFSLLPKL-----VCGLEVEADLVVYNALLSYFCKAG 406
            E  + P+ Y++ SL+S    +  F    +L      CG         +   ++Y+ K+G
Sbjct: 380 KEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNG--YTHVLFINYYGKSG 437

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
              +A++ Y  M  KG  PD  +   +L  L  + ++  A  V+  +     + +   +T
Sbjct: 438 QSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYT 497

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
            ++    +A +  +A+  F   +      DV++    I  L +GG+  EA+ L+ Q+K +
Sbjct: 498 MMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEM 557

Query: 527 AVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSA 586
            + P   TY  +L    +E  +K V  LL+++  +    +  T   +   + K    + A
Sbjct: 558 KIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCA 617

Query: 587 VNQLVEMCNLGLIPD 601
           +  L  M   G  PD
Sbjct: 618 IGMLYSMTEKGCTPD 632



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/384 (24%), Positives = 183/384 (47%), Gaps = 22/384 (5%)

Query: 187  SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
            S+N  +  L   N +   +D+   M R G  P+   + ++L+   K  RI E  ++   M
Sbjct: 775  SYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEM 834

Query: 247  ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA-KM 305
               G   +   +  +I G  + +RL+ A  L+  ++  G SP   TY  L+ G ++A KM
Sbjct: 835  HRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKM 894

Query: 306  FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
                  F +MLE  G  P+   +N+L++     G+ ++   +++ ++E  + PD  ++  
Sbjct: 895  VDAENLFNEMLEY-GCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTV 953

Query: 366  LLSTVCLSGRF----SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
            L+ T+C +GR     S   +L+  L +E DL++YN L+    K+    +AV L+N M  K
Sbjct: 954  LIDTLCTAGRLNDGLSYFRQLL-ELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKK 1012

Query: 422  GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
            G  P+ Y++  L+  L  A K  EA  +Y+ +++     N   + A++     +G    A
Sbjct: 1013 GIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTDNA 1072

Query: 482  IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI-----LYSQMKHIAVPPNAYTYR 536
               +          D V+  V+++  L  G  +E  I     L+++MK     P+ +TY 
Sbjct: 1073 YAAY----------DCVAVGVSLKTALISGLVDENLINIAEGLFAEMKRRGCGPDQFTYN 1122

Query: 537  VMLLSFCKERNIKMVKRLLQDVID 560
            ++L +  K   I+ + ++ +++ +
Sbjct: 1123 LILDAIGKSMRIEEMLKVQEEIAE 1146



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 125/599 (20%), Positives = 240/599 (40%), Gaps = 117/599 (19%)

Query: 75   KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
            K +    DV + + ++S + R +GR    + +  EL  +G      T+ + ++   +   
Sbjct: 450  KSKGIVPDVAAANAVLSSLAR-SGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASK 508

Query: 135  YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV---LKETQL-PNFLSFNI 190
                +  F +M   G  P+  A N ++D L+K G+ +   K+   LKE ++ P   ++N 
Sbjct: 509  ADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNT 568

Query: 191  ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
             L  L +   V  V  ++  M      PN+  +  +L+C  K G +  A  +L  M   G
Sbjct: 569  LLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKG 628

Query: 251  TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM------------------VQNG------- 285
             +  ++++  ++ G  +  R + A  ++ +M                  V+NG       
Sbjct: 629  CTPDLSSYNTVMYGLIKEERFEEAFRMFCQMKKILAPDYATLCTILPSFVKNGLMKEALH 688

Query: 286  ----------CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG--------------- 320
                      C+ +  ++ SL++G +       +  F + + S G               
Sbjct: 689  TVKEYILKADCNTDKSSFHSLMEGILNKAGVEKSIEFAENIASRGILLNDFFLCPLIRHL 748

Query: 321  --HAPDLVFHNVL-----IDCLSKMGSY-------------DDALDVYDGLLELKLVPDS 360
              H   L  H +      +    K GSY             D A D++  +  L   PD 
Sbjct: 749  CKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDE 808

Query: 361  YTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
            +T+  +L  +  S R   + ++   +     E+  V YN ++S   K+    QA+ LY  
Sbjct: 809  FTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYN 868

Query: 418  MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ--------------GIVMN------- 456
            ++ +GF+P   ++  LL GL  A K+ +A N++                I++N       
Sbjct: 869  LMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGN 928

Query: 457  ----------------NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSY 500
                            NP + +  +T ++D L  AGR +  +  FR+ +      D++ Y
Sbjct: 929  TENVCQIFEKMVEQGINPDIKS--YTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIY 986

Query: 501  TVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
             + I GL +  R EEA  L+++MK   + PN YTY  ++L   K        ++ ++++
Sbjct: 987  NLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELL 1045



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/343 (22%), Positives = 153/343 (44%), Gaps = 20/343 (5%)

Query: 216  FYPNVRMFEILLNCF---------CKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
            F  N+    ILLN F         CK  +  EA+QL      LG SL   ++  LI G  
Sbjct: 725  FAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLV 784

Query: 267  RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
                +D+A  L+ +M + GC P+  TY  ++    ++            +  +G+    V
Sbjct: 785  DENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYV 844

Query: 327  FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-------FSLL 379
             +N +I  L K    + A+D+Y  L+     P   T+  LL  +  +G+       F+ +
Sbjct: 845  TYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEM 904

Query: 380  PKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
             +  C    + +  +YN LL+    AG      +++  M+++G  PD  S+  L+  LC 
Sbjct: 905  LEYGC----KPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCT 960

Query: 440  ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
            A ++++ ++ ++ ++      +  ++  ++D L ++ R  +A+ LF     +    ++ +
Sbjct: 961  AGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYT 1020

Query: 500  YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
            Y   I  L + G+  EA  +Y ++      PN +TY  ++  +
Sbjct: 1021 YNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGY 1063


>gi|222616383|gb|EEE52515.1| hypothetical protein OsJ_34721 [Oryza sativa Japonica Group]
          Length = 820

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 126/505 (24%), Positives = 229/505 (45%), Gaps = 19/505 (3%)

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
           + R+G V    T+ L L+       Y MVL A++EM  F  TP+ +   IV   LF+  +
Sbjct: 180 ICRLGVVPSVWTWNLLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKK 239

Query: 170 VDLGIKVLKE-TQL---PN---FLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
           VD  ++V  E T++   P+   + SF I LC+ C   D++ V  ++  + R+        
Sbjct: 240 VDEALQVWAEMTEMGVKPDARGYSSFLIGLCD-CGKYDLAYV--ILQEINREKVPVEAMA 296

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           + ++++  CK  R+ EA +LL      G++  V  ++ LI  + ++  L  A   +E MV
Sbjct: 297 YNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMV 356

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
            +G   N    + L++ F +  M S A ++    +  G   D V +N+ +D   K G+ +
Sbjct: 357 SHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMN 416

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALL 399
           +A+ + + +    L PD   +  L+S  CL G      ++   +    +E D+V YN L 
Sbjct: 417 EAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILA 476

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA---INVYQGIVMN 456
           S FCK+G   +   L + M D+G  P++ ++   + G C    + EA    NV +   ++
Sbjct: 477 SGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGID 536

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
           +  V   +++++V   + +G    A  LF R   +   +D  S +  I  L   G  + A
Sbjct: 537 HIEV---MYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGA 593

Query: 517 YILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKF 576
             +   M    V P+  +Y  ++  +C+  ++        D++   + +D      L   
Sbjct: 594 SNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNG 653

Query: 577 IFKFHSSSSAVNQLVEMCNLGLIPD 601
             K      A    V+M NLG+ PD
Sbjct: 654 YCKAGRLQEACQLFVQMTNLGIKPD 678



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 129/547 (23%), Positives = 235/547 (42%), Gaps = 32/547 (5%)

Query: 82  DVQSFDHMISVVTR---LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMV 138
           DV +F    ++VTR      + +    +  E+  +G    A+ +  FL        Y + 
Sbjct: 223 DVYTF----AIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLA 278

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCN 194
                E+ R        A N+VMD L K  R+D   K+L    ++   P+   ++  + +
Sbjct: 279 YVILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRS 338

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
            CK+ ++ N  D    MV  G   N  +   LL CF K+G  +EA          G  L 
Sbjct: 339 YCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLD 398

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF-MEAKMFSIAFSFL 313
              + + +D + +   ++ A  L  +M   G +P+ + YT LI G+ ++ +M +    F 
Sbjct: 399 KVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFE 458

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           +ML++    PD+V +N+L     K G   +  D+ D + +  L P+S T+   +   C  
Sbjct: 459 EMLKANIE-PDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRG 517

Query: 374 GRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           G  S    L   +E   ++   V+Y++++  +  +G+ + A  L+  +  +G   D++S 
Sbjct: 518 GNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSC 577

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             L+  LC    +  A NV + ++ ++   +   ++ ++    + G   KA   F   + 
Sbjct: 578 SKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQ 637

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML----------- 539
               +DV+ YT+ + G  + GR +EA  L+ QM ++ + P+   Y V+L           
Sbjct: 638 RGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQG 697

Query: 540 -LSFCKERNIKMVK----RLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMC 594
                KER   +++    +LL  + D +IE D      L     K      A     EM 
Sbjct: 698 WEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEML 757

Query: 595 NLGLIPD 601
             GL PD
Sbjct: 758 QKGLTPD 764



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 112/442 (25%), Positives = 198/442 (44%), Gaps = 31/442 (7%)

Query: 136 GMVLEAFDEMGRF---GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSF 188
           GM  EA     +F   G   +    NI MD   K G ++  +K+L E +     P+ + +
Sbjct: 378 GMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHY 437

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
              +   C   ++ N + V   M++    P++  + IL + FCK G + E + LL  M  
Sbjct: 438 TCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMAD 497

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
            G   +   + + I GF R   L  A  L+  + + G     V Y+S++ G++ +     
Sbjct: 498 QGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDH 557

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A+     +  +G+  D    + LI+ L ++G+   A +V   +LE  +VPD  ++  L+S
Sbjct: 558 AYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLIS 617

Query: 369 TVCLSG---RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
             C +G   +  L    +    +  D++VY  L++ +CKAG   +A +L+  M + G  P
Sbjct: 618 IYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKP 677

Query: 426 DNYSFVGLLRGLCGARKIDEAINV-YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           D  ++  LL G      + E +   ++GI     +            L+ A   +K +  
Sbjct: 678 DVIAYTVLLDG-----HLKETLQQGWEGIAKERRSF-----------LLRANH-NKLLSS 720

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
            +   +E    DV  YTV I G  +     EA  L+ +M    + P+AY Y  ++  +C 
Sbjct: 721 MKDMQIEP---DVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCS 777

Query: 545 ERNIKMVKRLLQDVIDARIELD 566
           +  I   + LLQ++ID  IE D
Sbjct: 778 QGEISKAEDLLQEMIDKGIEPD 799



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 73/330 (22%), Positives = 150/330 (45%), Gaps = 3/330 (0%)

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           L+  + + G  P+V T+  L+K   E   + +  +  + ++     PD+    ++   L 
Sbjct: 176 LFSGICRLGVVPSVWTWNLLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLF 235

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL---LPKLVCGLEVEADLV 393
           +    D+AL V+  + E+ + PD+  + S L  +C  G++ L   + + +   +V  + +
Sbjct: 236 QAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAM 295

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            YN ++   CK    ++A KL      +G  PD Y +  L+R  C    +  A++ Y+ +
Sbjct: 296 AYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAM 355

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
           V +    N H+ + ++    + G   +AI  F +       LD V Y +A+    + G  
Sbjct: 356 VSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNM 415

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
            EA  L ++MK+  + P+   Y  ++  +C +  ++  +++ ++++ A IE D  T   L
Sbjct: 416 NEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNIL 475

Query: 574 TKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
                K        + L  M + GL P+ +
Sbjct: 476 ASGFCKSGLVMEVFDLLDRMADQGLEPNSL 505



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 79/348 (22%), Positives = 157/348 (45%), Gaps = 26/348 (7%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFL 186
           +GEM     + F+EM +    P+    NI+     K G V    DL  ++  +   PN L
Sbjct: 447 KGEMQN-AQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSL 505

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           ++ IA+   C+  ++S  + +  ++  KG      M+  ++  +   G    AY L   +
Sbjct: 506 TYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRV 565

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME-AKM 305
              G  +   + + LI+   R+  +  A  + + M+++   P+V++Y+ LI  + +   M
Sbjct: 566 ARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDM 625

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
                 F DM++  G + D++ + +L++   K G   +A  ++  +  L + PD   +  
Sbjct: 626 DKAHLWFHDMVQ-RGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTV 684

Query: 366 LLS-------------------TVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAG 406
           LL                    +  L    + L   +  +++E D+  Y  L+   CKA 
Sbjct: 685 LLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAE 744

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           +  +A +L++ ML KG TPD Y++  L+ G C   +I +A ++ Q ++
Sbjct: 745 YLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMI 792



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 112/256 (43%), Gaps = 25/256 (9%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCK 197
           F  + R G   + F+ + +++ L ++G V     V    L+   +P+ +S++  +   C+
Sbjct: 562 FVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQ 621

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
             D+         MV++G   +V ++ IL+N +CK GR+ EA QL   M  LG    V A
Sbjct: 622 NGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIA 681

Query: 258 WTVLIDGFRRLRRLDMAGY------------------LWEKMVQNGCSPNVVTYTSLIKG 299
           +TVL+DG   L+     G+                  L   M      P+V  YT LI G
Sbjct: 682 YTVLLDG--HLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDG 739

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
             +A+    A    D +  +G  PD   +  LI+     G    A D+   +++  + PD
Sbjct: 740 KCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPD 799

Query: 360 SYTFCSLLSTVCLSGR 375
             TF S+L+   L  R
Sbjct: 800 ELTF-SVLNQSSLRSR 814



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/237 (24%), Positives = 108/237 (45%), Gaps = 9/237 (3%)

Query: 368 STVCL-SGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
           +T+CL SG        +C L V   +  +N LL +  + G     +  YN M     TPD
Sbjct: 172 ATICLFSG--------ICRLGVVPSVWTWNLLLKFIAETGEYEMVLAAYNEMKCFQLTPD 223

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
            Y+F  + R L  A+K+DEA+ V+  +       +A  +++ +  L + G+   A  + +
Sbjct: 224 VYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQ 283

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
               EK P++ ++Y + + GL +  R +EA  L          P+ Y Y  ++ S+CK  
Sbjct: 284 EINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMG 343

Query: 547 NIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           N+       + ++   IE + H    L +   K   +S A+   ++  + GL  D++
Sbjct: 344 NLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKV 400



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/229 (20%), Positives = 99/229 (43%), Gaps = 16/229 (6%)

Query: 76  QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
           + D   DV S+  +IS+  +  G  +       ++ + G  +    + + +  Y +    
Sbjct: 602 EHDVVPDVISYSKLISIYCQ-NGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRL 660

Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNL 195
               + F +M   G  P+  A  +++D   K         + KE +     SF +   N 
Sbjct: 661 QEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERR-----SF-LLRANH 714

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
            KL  +S++KD+          P+V  + +L++  CK   + EA +L   M+  G +   
Sbjct: 715 NKL--LSSMKDM-------QIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDA 765

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
            A+T LI+G+     +  A  L ++M+  G  P+ +T++ L +  + ++
Sbjct: 766 YAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSVLNQSSLRSR 814


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 110/473 (23%), Positives = 209/473 (44%), Gaps = 39/473 (8%)

Query: 101 ETVRGIVGELARVGCVIKAQTFLLFLRI---YWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           + V   V +  R+ C+      + F +I   + + + Y   +     +   G  P+    
Sbjct: 38  QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITL 97

Query: 158 NIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           NI+++    +G++  G     K+LK    P+ ++F   +  LC    V+        ++ 
Sbjct: 98  NILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLA 157

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +G   +   +  L+N  CK+G    A +L+  +    T  +V  +  +ID   + + +  
Sbjct: 158 QGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSE 217

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L+ +M   G S +VVTYT+LI GF  A     A   L+ +  +   P++  +N+L+D
Sbjct: 218 AYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVD 277

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLV 393
            L K G   +A +V   +L+  + PD  T+ +L     + G F                +
Sbjct: 278 ALCKEGKVKEAKNVLAVMLKACVKPDVITYSTL-----MDGYF----------------L 316

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
           VY              +A  ++N M   G TPD +S+  L+ G C  + +DEA+N+++ +
Sbjct: 317 VYEL-----------KKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEM 365

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
              N       +++++D L ++GR      L         P +V++Y   I GL + G  
Sbjct: 366 HQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHL 425

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           + A  L+++MK   + P ++T+ ++L   CK   +K  +   QD++     LD
Sbjct: 426 DRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLD 478



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/375 (24%), Positives = 177/375 (47%), Gaps = 14/375 (3%)

Query: 82  DVQSFDHMISVVTRL---TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMV 138
           D  S+  +I+ V ++    G  + VR I G L +    +         +     E YG+ 
Sbjct: 163 DQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGL- 221

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCN 194
              F EM   G + +      ++       ++   I +L E  L    PN  ++NI +  
Sbjct: 222 ---FSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDA 278

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           LCK   V   K+V+ +M++    P+V  +  L++ +  +  + +A  +   M  +G +  
Sbjct: 279 LCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPD 338

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           V+++T+LI+GF + + +D A  L+++M Q    P +VTY+SLI G  ++   S  +  +D
Sbjct: 339 VHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLID 398

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            +   G   +++ +N LID L K G  D A+ +++ + +  + P S+TF  LL  +C  G
Sbjct: 399 EMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGG 458

Query: 375 RFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
           R     +    L  +    D+  YN +++  CK G   +A+ + + M + G  P+  +F 
Sbjct: 459 RLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFD 518

Query: 432 GLLRGLCGARKIDEA 446
            ++  L    + D+A
Sbjct: 519 IIINALFKKDENDKA 533



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 99/422 (23%), Positives = 174/422 (41%), Gaps = 40/422 (9%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P  + FN  L +  K+   S    +   +  KG  P++    IL+NCFC MG+I   + +
Sbjct: 57  PPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           L                                    K+++ G  P+ +T+T+LIKG   
Sbjct: 117 LA-----------------------------------KILKRGYQPHTITFTTLIKGLCL 141

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
               + A  F D L ++G   D V +  LI+ + K+G    A+ +   +      P+   
Sbjct: 142 KGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEM 201

Query: 363 FCSLLSTVC----LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           + +++  +C    +S  + L  ++     + AD+V Y  L+  FC A    +A+ L N M
Sbjct: 202 YNTIIDALCKYQLVSEAYGLFSEMTAK-GISADVVTYTTLIYGFCIASKLKEAIGLLNEM 260

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
           + K   P+ Y++  L+  LC   K+ EA NV   ++      +   ++ ++D        
Sbjct: 261 VLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYEL 320

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            KA  +F    +     DV SYT+ I G  +    +EA  L+ +M    + P   TY  +
Sbjct: 321 KKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSL 380

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGL 598
           +   CK   I  V  L+ ++ D  I  +  T   L   + K      A+    +M + G+
Sbjct: 381 IDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGI 440

Query: 599 IP 600
            P
Sbjct: 441 RP 442



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 81/334 (24%), Positives = 143/334 (42%), Gaps = 32/334 (9%)

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
           ++ +D A   + +M+    +P ++ +  ++  F + K +S A S    LE +G  PDL+ 
Sbjct: 37  IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLIT 96

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE 387
            N+LI+C   MG       V   +L+    P + TF +L+  +CL G+            
Sbjct: 97  LNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQV----------- 145

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
                                N+A+  ++ +L +G   D  S+  L+ G+C       AI
Sbjct: 146 ---------------------NKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAI 184

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            + + I       N  ++  I+D L +     +A  LF     +    DVV+YT  I G 
Sbjct: 185 KLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGF 244

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
               + +EA  L ++M    + PN YTY +++ + CKE  +K  K +L  ++ A ++ D 
Sbjct: 245 CIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDV 304

Query: 568 HTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            T   L    F  +    A +    M  +G+ PD
Sbjct: 305 ITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPD 338


>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
 gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 125/534 (23%), Positives = 211/534 (39%), Gaps = 72/534 (13%)

Query: 48  LAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIV 107
           L P +V + LL+   + +AL FF W  +Q  Y HD   +  M+ V+++ T   +  R ++
Sbjct: 48  LKPRLVCAVLLSQSDERVALDFFFWSDRQWRYRHDPIVYCVMLDVLSK-TKLCQGARRVL 106

Query: 108 GELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKI 167
             + R G     Q F   +  Y R       ++    M + G  PN    N  + VL   
Sbjct: 107 RLMVRRGIQRTPQDFCCVMVSYSRAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMA 166

Query: 168 GRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYP----- 218
             ++  ++ L+  QL    PN +++N  +   C L+ V +  ++I  M  KG  P     
Sbjct: 167 NMLEKALRFLERMQLLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSY 226

Query: 219 ---------NVRMFEI---------------------LLNCFCKMGRIAEAYQLLGLMIT 248
                    N R+ E+                     L++  CK     EA Q L     
Sbjct: 227 YTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQK 286

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
            G  +    ++ ++D + +  R+D A  +  +M   GC P+VVTYT++I GF +A     
Sbjct: 287 RGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQ 346

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A   L  +   G  P+ V +   +  L + G+  +A ++     E    P++ T      
Sbjct: 347 ARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAIT------ 400

Query: 369 TVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
                                     Y+ ++  F + G  + A  +   M+ KGF P   
Sbjct: 401 --------------------------YSVVMHGFRREGKLSDACDVVREMIGKGFFPTPV 434

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
               LL+ LC   ++DEA    +  +    AVNA   T ++ R  +      A+ L    
Sbjct: 435 EINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDM 494

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
            +     D V+YT  I  L + GR EEA  L  +M    + P   TYR ++  +
Sbjct: 495 YLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIHRY 548



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 100/468 (21%), Positives = 195/468 (41%), Gaps = 38/468 (8%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALC 193
            +E   EM   G +P+  +   VM  L K  R+   + V+++ +    L + +++N  + 
Sbjct: 207 AMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIH 266

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
            LCK          +    ++GF  +   +  +++ +CK GR+ +A +++  M T G   
Sbjct: 267 MLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIP 326

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
            V  +T +I+GF +   +  A  + ++M ++GC PN V+YT+ +KG  +    S A   +
Sbjct: 327 DVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMM 386

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
              E +   P+ + ++V++    + G   DA DV   ++     P               
Sbjct: 387 KASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTP------------- 433

Query: 374 GRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
                              V  N LL   C+ G  ++A K     L+ G   +  +F  +
Sbjct: 434 -------------------VEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTV 474

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           +   C    I+ A+++   + ++N   +A  +T I+D L + GR  +A +L  + + +  
Sbjct: 475 IHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKKGI 534

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
               V+Y   I    + GR E+   L  +M  +        +  ++   C   N++   +
Sbjct: 535 DPTPVTYRTVIHRYGQIGRVEDLLNLLDKM--LTRQECRTAFNQVIEKLCTFGNLEAADK 592

Query: 554 LLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           LL  V+     +D +T   L +   +     SA      M +  LIPD
Sbjct: 593 LLGKVLRTASRIDANTCHVLMESYLRKGIPLSAYKVACRMFSRSLIPD 640



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 91/417 (21%), Positives = 171/417 (41%), Gaps = 3/417 (0%)

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
            F   + +  +   + N   V+ MM + G  PN+ +    ++       + +A + L  M
Sbjct: 120 DFCCVMVSYSRAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERM 179

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
             LG   +V  +  LI G+  L R++ A  L  +M   GCSP+ V+Y +++    + +  
Sbjct: 180 QLLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRI 239

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
                 ++ +E      D V +N LI  L K    D+AL       +     D   + ++
Sbjct: 240 REVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAI 299

Query: 367 LSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           + + C  GR     ++V  +       D+V Y A+++ F +AG   QA K+   M   G 
Sbjct: 300 VDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGC 359

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
            P+  S+   L+GLC      EA  + +         NA  ++ ++      G+   A  
Sbjct: 360 KPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACD 419

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           + R  I + +    V   + ++ L   GR +EA     +  ++    NA  +  ++  FC
Sbjct: 420 VVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFC 479

Query: 544 KERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           ++ +I+    LL D+  +    D  T   +   + K      A    ++M   G+ P
Sbjct: 480 QQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKKGIDP 536



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/414 (20%), Positives = 182/414 (43%), Gaps = 13/414 (3%)

Query: 47  ILAPHIVHSTLLN--CPSDLIALSF-FIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETV 103
           +LA  + ++TL++  C       +  F+  A++R +  D   +  ++    +  GR +  
Sbjct: 254 LLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCK-EGRMDQA 312

Query: 104 RGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDV 163
           + IV E+   GC+    T+   +  + +    G   +   +M + G  PNT +    +  
Sbjct: 313 KEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKG 372

Query: 164 LFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN 219
           L + G      +++K ++     PN +++++ +    +   +S+  DV+  M+ KGF+P 
Sbjct: 373 LCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPT 432

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
                +LL   C++GR+ EA + +   + +G +++   +T +I  F +   ++ A  L +
Sbjct: 433 PVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLD 492

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
            M  +   P+ VTYT++I    +      A      +  +G  P  V +  +I    ++G
Sbjct: 493 DMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQIG 552

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNA-- 397
             +D L++ D +L  +    ++    ++  +C  G      KL+  +   A  +  N   
Sbjct: 553 RVEDLLNLLDKMLTRQECRTAFN--QVIEKLCTFGNLEAADKLLGKVLRTASRIDANTCH 610

Query: 398 -LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
            L+  + + G P  A K+   M  +   PD      + + L    K +EA N++
Sbjct: 611 VLMESYLRKGIPLSAYKVACRMFSRSLIPDLKLCEKVCKKLMQEGKSEEADNLF 664



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/218 (22%), Positives = 90/218 (41%), Gaps = 10/218 (4%)

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           D +VY  +L    K      A ++   M+ +G       F  ++     A K+  A+ V 
Sbjct: 82  DPIVYCVMLDVLSKTKLCQGARRVLRLMVRRGIQRTPQDFCCVMVSYSRAGKLRNAMQVL 141

Query: 451 Q-----GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
                 GI  N    N  +H  ++  ++E     KA++   R  +     +VV+Y   I+
Sbjct: 142 TMMQKAGIEPNLLVCNTAIHVLVMANMLE-----KALRFLERMQLLGIMPNVVTYNCLIK 196

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
           G  +  R E+A  L S+M      P+  +Y  ++   CK R I+ V  +++ + D ++  
Sbjct: 197 GYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLA 256

Query: 566 DYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           D  T   L   + K   +  A+  L E    G   D++
Sbjct: 257 DQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKV 294


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 118/529 (22%), Positives = 235/529 (44%), Gaps = 38/529 (7%)

Query: 47  ILAPHIVHSTLLNCPSDL-IALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRG 105
           +  P      LLN   D  + L FF W  K+    + ++    ++  +   + R+  VR 
Sbjct: 41  VTKPATFLDQLLNAGVDSELVLRFFKWSQKEYRLSYGLEPTSKVLHFLAN-SKRYSKVRS 99

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
                              FL  + + E +  V   F  +   G  P   A  I M VL 
Sbjct: 100 -------------------FLDSFVKNEKH-TVSSVFHSLLLDGGRPGATALIIDMLVLA 139

Query: 166 KIGRVDLGIKVLKETQLPNF-LSFNIALCN-----LCKLNDVSNVKDVIGMMVRKGFYPN 219
            +  ++L       T+  ++    ++  CN     L K N + +V+ V   M+++  + N
Sbjct: 140 YVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTN 199

Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR---LRRLDMAGY 276
           +  F I +N  C+ G++ +A   +  M   G S +V  +  L+DG+ +     ++  A  
Sbjct: 200 LNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEA 259

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
             ++M+ N   PN VT+ +LI GF + +  + A    + ++ +G  P++V +N LI+ L 
Sbjct: 260 FMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLC 319

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLV 393
             G  ++A+D++D ++ L L P+  T+ +L++  C         K+   V   E+  +++
Sbjct: 320 NNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVI 379

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            +N ++  +CK G   +   L ++MLD+G  P+  ++  L+ GLC  + +  A  +    
Sbjct: 380 TFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNE- 438

Query: 454 VMNNPAVNAHV--HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
            M N  +   V  +  ++D L +  +   A +L           + V+Y   + G    G
Sbjct: 439 -MENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEG 497

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
           + + A  + ++M+     PN  TY V++  +CK   ++    LL ++++
Sbjct: 498 KLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLE 546



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 186/414 (44%), Gaps = 12/414 (2%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFK---IGRVDLGIK-VLKETQLPNFLSFNIALCNL 195
           EAF     +GF  +  + N ++  L K   IG V+   K ++K     N  +FNI +  L
Sbjct: 151 EAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGL 210

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT-LGTSLS 254
           C+   ++  +D I  M   G  PNV  +  L++ +CK G   + Y+    M   L   + 
Sbjct: 211 CRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKIC 270

Query: 255 VNAWT--VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
            N  T   LIDGF +   +  A   +E+M + G  PN+VTY SLI G         A   
Sbjct: 271 PNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDL 330

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
            D +   G  P++V +N LI+   K     +A  V+D + + +LVP+  TF +++   C 
Sbjct: 331 WDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCK 390

Query: 373 SGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
            G     FSL   ++    +  ++  YN L++  C+      A +L N M +KG   D  
Sbjct: 391 EGMMEEGFSLCSSML-DEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVV 449

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
           ++  L+ GLC   K   A  +   +       N   +  ++D     G+   A+ +  R 
Sbjct: 450 TYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRM 509

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
             E+   +VV+Y V I+G  +  + E A  L ++M    + PN  TY ++ L  
Sbjct: 510 EKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVRLEM 563



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 85/356 (23%), Positives = 153/356 (42%), Gaps = 45/356 (12%)

Query: 120 QTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIK---- 175
            TF +F+    R        +A ++M  +G +PN    N ++D   K G      K    
Sbjct: 201 NTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAF 260

Query: 176 ---VLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCK 232
              +L     PN ++FN  +   CK  +V+  K     M ++G  PN+  +  L+N  C 
Sbjct: 261 MKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCN 320

Query: 233 MGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVT 292
            G++ EA  L   M+ LG   ++  +  LI+GF + + +  A  +++ + +    PNV+T
Sbjct: 321 NGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVIT 380

Query: 293 YTSLIKGFMEAKMFSIAFS-----------------------------------FLDMLE 317
           + ++I  + +  M    FS                                    L+ +E
Sbjct: 381 FNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEME 440

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
           ++G   D+V +N+LID L K     +A  + + +  L L P+  T+ +L+   C+ G+  
Sbjct: 441 NKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLK 500

Query: 378 LLPKLVCGLEVE---ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
               +   +E E    ++V YN L+  +CK      A  L N ML+KG  P+  ++
Sbjct: 501 AALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTY 556



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 90/405 (22%), Positives = 176/405 (43%), Gaps = 31/405 (7%)

Query: 199 NDVSNVKDVIGMMVRKGFYPNVR--MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
           N+   V  V   ++  G  P     + ++L+  + K   +  AY+        G  LS+ 
Sbjct: 107 NEKHTVSSVFHSLLLDGGRPGATALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLT 166

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
           +   L+    +  ++    Y++++M++     N+ T+   I G   A   + A   ++ +
Sbjct: 167 SCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDM 226

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
           ++ G +P++V +N L+D   K GS   A  +Y     +K                     
Sbjct: 227 KAWGISPNVVTYNTLVDGYCKRGS---AGKMYKAEAFMK--------------------- 262

Query: 377 SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
            +L   +C  EV      +N L+  FCK      A K +  M  +G  P+  ++  L+ G
Sbjct: 263 EMLANKICPNEV-----TFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLING 317

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
           LC   K++EAI+++  +V      N   + A+++   +     +A ++F     ++   +
Sbjct: 318 LCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPN 377

Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
           V+++   I    + G  EE + L S M    + PN  TY  ++   C++++++  K LL 
Sbjct: 378 VITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLN 437

Query: 557 DVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           ++ +  ++ D  T   L   + K   S +A   L EM NLGL P+
Sbjct: 438 EMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPN 482



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 4/239 (1%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
            G+ E    +  ++  +G      T+   +  + + +M     + FD++ +    PN   
Sbjct: 321 NGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVIT 380

Query: 157 RNIVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N ++D   K G ++ G  +    L E  LPN  ++N  +  LC+  D+   K+++  M 
Sbjct: 381 FNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEME 440

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
            KG   +V  + IL++  CK  +   A +LL  M  LG   +   +  L+DG+    +L 
Sbjct: 441 NKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLK 500

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
            A  +  +M +    PNVVTY  LIKG+ +      A   L+ +  +G  P+   ++++
Sbjct: 501 AALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIV 559


>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 732

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 125/504 (24%), Positives = 213/504 (42%), Gaps = 24/504 (4%)

Query: 81  HDVQSFDHMISVVTRLT------GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
            D+QS    I V + L       G FE    +  E+    C   ++  L  L    R   
Sbjct: 157 EDIQSPKFSIGVFSLLIMEFLEMGLFEDALWVSREMR---CSPDSKACLAILNGLVRRRR 213

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE-TQL---PNFLSFNI 190
           +  V   +  M   G  P+    +++    FK G      K+L E T L   PN   + I
Sbjct: 214 FDSVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTI 273

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            + +LC+ N +   + +  +M   G  PN+  +  +++ +CK G + +AY L   ++   
Sbjct: 274 YIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAE 333

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
              +V  +  L+DGF + R L  A  L+  MV+ G  PN+  Y  LI G  ++     A 
Sbjct: 334 LLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAM 393

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
             L  +ES   +PD+  + +LI+ L       +A  ++  +   ++ P S T+ SL+   
Sbjct: 394 GLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGF 453

Query: 371 CLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
           C          L   +    VE +++ ++ L+  +CK      A+ LY  M  KG  PD 
Sbjct: 454 CKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDV 513

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF-- 485
            ++  L+        + EA+ +Y  ++      N H    +VD   + GR   AI  +  
Sbjct: 514 VTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLE 573

Query: 486 ------RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
                  ++IV++     V +T  I GL + G    A   +S MK   V P+ ++Y  ML
Sbjct: 574 NNQAATGKSIVQRSCWKYVGFTCLIEGLCQNGYILRASRFFSDMKSGGVTPDIWSYVSML 633

Query: 540 LSFCKERNIKMVKRLLQDVIDARI 563
            +  +E+ I     L  D+I   I
Sbjct: 634 KAHLREKRITDTMMLHCDMIKTGI 657



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 102/441 (23%), Positives = 181/441 (41%), Gaps = 50/441 (11%)

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           ++ E+  +G       + +++R   R        + F+ M   G  PN +  + ++D   
Sbjct: 255 LLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYC 314

Query: 166 KIGRVDLGIKVLKE----TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
           K G +     + KE      LPN + F   +   CK  ++   + +   MV+ G  PN+ 
Sbjct: 315 KTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLY 374

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
           ++  L++  CK G + EA  LL  M +L  S  V  +T+LI+G     RL  A  L+++M
Sbjct: 375 VYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRM 434

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
                 P+ VTY SLI GF +      A      + S G  P+++  + LID   K+ + 
Sbjct: 435 KNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNI 494

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSY 401
             A+ +Y  +    +VPD                                +V Y  L+  
Sbjct: 495 KAAMGLYFEMTIKGIVPD--------------------------------VVTYTTLIDA 522

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVN 461
             K     +A++LY+ ML+ G  P++++F  L+ G     ++ +AI+ Y   + NN A  
Sbjct: 523 HFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFY---LENNQAAT 579

Query: 462 AHV-----------HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
                          T +++ L + G   +A + F          D+ SY   ++  L  
Sbjct: 580 GKSIVQRSCWKYVGFTCLIEGLCQNGYILRASRFFSDMKSGGVTPDIWSYVSMLKAHLRE 639

Query: 511 GRTEEAYILYSQMKHIAVPPN 531
            R  +  +L+  M    + PN
Sbjct: 640 KRITDTMMLHCDMIKTGILPN 660



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 101/406 (24%), Positives = 181/406 (44%), Gaps = 16/406 (3%)

Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
           ++ +F +L+  F +MG   +A   L +   +  S    A   +++G  R RR D     +
Sbjct: 165 SIGVFSLLIMEFLEMGLFEDA---LWVSREMRCSPDSKACLAILNGLVRRRRFDSVWVDY 221

Query: 279 EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
           + M+  G  P+V  Y+ L +   +    S     LD + S G  P++  + + I  L + 
Sbjct: 222 QLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRE 281

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL---LPKLVCGLEVEADLVVY 395
              ++A  +++ +    +VP+ YT+ +++   C +G       L K +   E+  ++VV+
Sbjct: 282 NKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVF 341

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
             L+  FCKA     A  L+  M+  G  P+ Y +  L+ G C +  + EA+ +   +  
Sbjct: 342 GTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMES 401

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
            N + +   +T +++ L    R  +A +LF+R   E+     V+Y   I G  +    E+
Sbjct: 402 LNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEK 461

Query: 516 AYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTK 575
           A  L S+M    V PN  T+  ++  +CK RNIK    L  ++    I  D  T   L  
Sbjct: 462 ALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLID 521

Query: 576 FIFKFHSSSSAVNQLVEMCNLGLIP---------DEMWRKLGLLSD 612
             FK  +   A+    +M   G+ P         D  W++ G LSD
Sbjct: 522 AHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKE-GRLSD 566



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 88/387 (22%), Positives = 165/387 (42%), Gaps = 40/387 (10%)

Query: 210 MMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLR 269
           +M+ +G  P+V ++ +L  C  K G  ++  +LL  M +LG                   
Sbjct: 223 LMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVK----------------- 265

Query: 270 RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHN 329
                             PNV  YT  I+          A    ++++  G  P+L  ++
Sbjct: 266 ------------------PNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYS 307

Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC----LSGRFSLLPKLVCG 385
            +ID   K G+   A  +Y  +L  +L+P+   F +L+   C    L    SL   +V  
Sbjct: 308 AMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMV-K 366

Query: 386 LEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
             V+ +L VYN L+   CK+G   +A+ L + M     +PD +++  L+ GLC   ++ E
Sbjct: 367 FGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAE 426

Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
           A  ++Q +       ++  + +++    +     KA+ L           ++++++  I 
Sbjct: 427 ANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLID 486

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
           G  +    + A  LY +M    + P+  TY  ++ +  KE N+K   RL  D+++A I  
Sbjct: 487 GYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHP 546

Query: 566 DYHTSIRLTKFIFKFHSSSSAVNQLVE 592
           + HT   L    +K    S A++  +E
Sbjct: 547 NDHTFACLVDGFWKEGRLSDAIDFYLE 573


>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
 gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
          Length = 532

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/424 (24%), Positives = 192/424 (45%), Gaps = 21/424 (4%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFY--PNVRMFEILLNCFCKMGRIAEAY 240
           P+  S+ + L  LC         D+I MM   G +  PNV  +  +++ F K   + +AY
Sbjct: 82  PDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHGFFKEDEVGKAY 141

Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
            L   M+  G    V     +IDG  +++ +D A  +  +M      P+  TY SL+ G+
Sbjct: 142 TLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSLVHGY 201

Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
           + +     A   L  +   G  P+ V +++LIDCL K G + +A ++ + +++ +  P+ 
Sbjct: 202 LSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNPNV 261

Query: 361 YTFCSLLSTVCLSG---RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
            T+  LL      G     + L  L+    V  D  ++N  +  + K G  ++A+  +N 
Sbjct: 262 ATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNK 321

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           M  +G  PD  S+  ++ GLC   ++D A++ +  ++ +  + +  V T ++      G+
Sbjct: 322 MRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGK 381

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
             KA +LF   +       VV +T  I  L + G+  EA  L+  M   +V PN  +Y  
Sbjct: 382 WEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNA 441

Query: 538 MLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLG 597
           ++  +     +  V +LL D++          S+ L      F++       L +M ++G
Sbjct: 442 IIHGYFLAGKLDEVLKLLDDML----------SVGLKPNAVTFNT------LLDDMLSMG 485

Query: 598 LIPD 601
           L PD
Sbjct: 486 LKPD 489



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 90/431 (20%), Positives = 178/431 (41%), Gaps = 23/431 (5%)

Query: 115 CVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI 174
           C     ++   +  +++ +  G     F EM   G  P+    N ++D L K+  +D   
Sbjct: 117 CPPNVVSYTTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAE 176

Query: 175 KVLKET----QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCF 230
           +VL++      +P+  ++N  +        +     ++  M R G  PN   + +L++C 
Sbjct: 177 EVLRQMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCL 236

Query: 231 CKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNV 290
           CK G   EA ++L  MI    + +V  +  L+ G+     L     L + MVQNG  P+ 
Sbjct: 237 CKFGGHTEAREILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDH 296

Query: 291 VTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDG 350
             +   I  +++      A    + +  +G  PD++ +  +ID L K+G  D A+  +  
Sbjct: 297 HIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQ 356

Query: 351 LLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGF 407
           +++  L PD   F +L+    + G++    +L   +    +   +VV+  ++    K G 
Sbjct: 357 MIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGK 416

Query: 408 PNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTA 467
             +A  L++ M      P+  S+  ++ G   A K+DE + +   ++      NA     
Sbjct: 417 VTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNT 476

Query: 468 IVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIA 527
           ++D ++  G                   DV +    I    E GR E+   L+ +M   A
Sbjct: 477 LLDDMLSMG----------------LKPDVATCNTLIDSCCEDGRIEDVLTLFREMLSKA 520

Query: 528 VPPNAYTYRVM 538
              +  T  ++
Sbjct: 521 AKTDTVTENII 531



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 94/425 (22%), Positives = 179/425 (42%), Gaps = 43/425 (10%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P  +++ I +   C +  ++     +G +++ G   N   F  +L   C   R ++A  +
Sbjct: 11  PTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSDAMNI 70

Query: 243 -LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG--CSPNVVTYTSLIKG 299
            +     LG +  V ++TVL+ G    ++ + A  L   M ++G  C PNVV+YT++I G
Sbjct: 71  VIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHG 130

Query: 300 FMEAKMFSIAFS-FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP 358
           F +      A++ F +ML+  G  PD+V  N +ID L K+ + D A +V   + +  ++P
Sbjct: 131 FFKEDEVGKAYTLFCEMLD-RGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMP 189

Query: 359 DSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLY 415
           D  T+ SL+     SG+     +++  +       + V Y+ L+   CK G   +A ++ 
Sbjct: 190 DCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREIL 249

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
           N+M+     P+  ++ GLL G      + E  N+   +V N    + H+           
Sbjct: 250 NSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHI----------- 298

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
                                   + + I   ++ GR +EA + +++M+   + P+  +Y
Sbjct: 299 ------------------------FNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISY 334

Query: 536 RVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCN 595
             M+   CK   +         +ID  +  D      L      +     A     EM +
Sbjct: 335 GTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMD 394

Query: 596 LGLIP 600
            G+ P
Sbjct: 395 RGIRP 399



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 72/323 (22%), Positives = 146/323 (45%), Gaps = 10/323 (3%)

Query: 287 SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALD 346
           +P  VTYT LI         ++AF+ L  +   G   + +    ++  L       DA++
Sbjct: 10  APTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSDAMN 69

Query: 347 -VYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEAD-----LVVYNALLS 400
            V     +L   PD +++  LL  +C   +      L+  +  + D     +V Y  ++ 
Sbjct: 70  IVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIH 129

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
            F K     +A  L+  MLD+G  PD  +   ++ GLC  + +D+A  V + +   +   
Sbjct: 130 GFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMP 189

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE-GGRTEEAYIL 519
           +   + ++V   + +G+  +A+++ ++      P + V+Y++ I  L + GG TE   IL
Sbjct: 190 DCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREIL 249

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT-SIRLTKFIF 578
            S ++     PN  TY  +L  +  + ++  +  L+  ++   +  D+H  +I++  ++ 
Sbjct: 250 NSMIQSRG-NPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYV- 307

Query: 579 KFHSSSSAVNQLVEMCNLGLIPD 601
           K      A+    +M   GL+PD
Sbjct: 308 KCGRLDEAMLTFNKMRQQGLMPD 330



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 53/221 (23%), Positives = 93/221 (42%), Gaps = 9/221 (4%)

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
           +V    V Y  L+S  C  G  N A      ++  G   +  SF  +LR LC  ++  +A
Sbjct: 8   KVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSDA 67

Query: 447 INVYQGIVMNNPAV----NAHVHTAIVDRLIEAGRCHKAIQLFRRAIV--EKYPLDVVSY 500
           +N+   ++   P +    +   +T ++  L +  +C +A+ L        +  P +VVSY
Sbjct: 68  MNI---VIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSY 124

Query: 501 TVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
           T  I G  +     +AY L+ +M    +PP+  T   ++   CK + +   + +L+ + D
Sbjct: 125 TTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFD 184

Query: 561 ARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
             I  D  T   L            AV  L +M   G  P+
Sbjct: 185 KHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPN 225


>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 775

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 125/508 (24%), Positives = 206/508 (40%), Gaps = 73/508 (14%)

Query: 136 GMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIAL 192
           GM+ EA   F  M RF   P   + N  +  L K G+ DL  K  ++             
Sbjct: 196 GMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRD------------- 242

Query: 193 CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
                             MV  G   +V  + I++   CK G +  A  L   M  +G +
Sbjct: 243 ------------------MVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLT 284

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
             +  +  LIDG+ +L  LD +  L+E+M   GC P+V+TY +LI  F + +    AF F
Sbjct: 285 PDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHF 344

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
           L  +++ G  P++V ++ LID L K      A+     +  + L P+ +T+ SL+   C 
Sbjct: 345 LHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCK 404

Query: 373 SGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
           +G  S   KL   +  ++V  ++V Y  LL   CK G   +A  L+  M+  G TP+  +
Sbjct: 405 AGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKT 464

Query: 430 FVGLLR-----------------------------------GLCGARKIDEAINVYQGIV 454
           +  L+                                    GLC   K++E   V   + 
Sbjct: 465 YTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMK 524

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
                 N+ ++T  +D   + G+  +A+ L +        + +V++ V I GL + G  E
Sbjct: 525 ACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVE 584

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLS-FCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
           EA   +++M    + PN       L+   CK   I+  K+L  ++ D  +  D      L
Sbjct: 585 EAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTAL 644

Query: 574 TKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
                K      A+N    M  LG+  D
Sbjct: 645 IDGNLKHKDFQEALNIRSRMSELGMELD 672



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 118/486 (24%), Positives = 219/486 (45%), Gaps = 17/486 (3%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           F +M + G TP+    N ++D   K+G +D    + +E +     P+ +++N  +   CK
Sbjct: 275 FHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCK 334

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              +      +  M   G  PNV  +  L++  CK   + +A + L  M  +G S +   
Sbjct: 335 YEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFT 394

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF-MEAKMFSIAFSFLDML 316
           +T LID   +   L  A  L ++M+Q     NVVTYT+L+ G   E +M      F  M+
Sbjct: 395 YTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMI 454

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR- 375
           ++ G  P+L  +  L+    K    ++AL++   + E K+ PD   + +++  +C   + 
Sbjct: 455 KA-GVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKL 513

Query: 376 ----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
               F +     CG  + A+ V+Y   +  + K G   +A+ L   M D G      +F 
Sbjct: 514 EECEFVMSEMKACG--IRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFC 571

Query: 432 GLLRGLCGARKIDEAINVYQGIV-MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
            L+ GLC    ++EAI+ +  +   N    N  V TA++D L +      A +LF     
Sbjct: 572 VLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQD 631

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
           +    D ++YT  I G L+    +EA  + S+M  + +  + + Y  ++    +   ++ 
Sbjct: 632 KNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGLSQGNLVQQ 691

Query: 551 VKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP-DEMWRKLGL 609
            +  L ++I   I  D    IRL +  ++  S   A+    E+  L  +P DE+  +  L
Sbjct: 692 ARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIELHDEL--LKKVPLDELLEEQNL 749

Query: 610 LSDETM 615
           + ++ +
Sbjct: 750 MPEKIL 755



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 104/495 (21%), Positives = 200/495 (40%), Gaps = 62/495 (12%)

Query: 81  HDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLE 140
             V +++ MI  + +  G   T + +  ++ ++G      T+   +  Y +  +      
Sbjct: 250 QSVFTYNIMIGYMCK-EGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFC 308

Query: 141 AFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLC 196
            F+EM   G  P+    N +++   K  ++      L E +     PN ++++  +  LC
Sbjct: 309 LFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALC 368

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
           K + +      +  M R G  PN   +  L++  CK G +++A +L   M+ +    +V 
Sbjct: 369 KEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVV 428

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
            +T L+DG  +  R+  A  L+  M++ G +PN+ TYT+L+ G ++ K    A   L  +
Sbjct: 429 TYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEI 488

Query: 317 ESEGHAPDLVFHNVLI-----------------------------------DCLSKMGSY 341
           + +   PDL+ +  +I                                   D   K G  
Sbjct: 489 KEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKT 548

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG-------------RFSLLPKLVCGLEV 388
            +AL++   + +L +     TFC L+  +C  G              F+L P        
Sbjct: 549 VEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPN------- 601

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
             ++ V  AL+   CK  +   A KL++ M DK   PD  ++  L+ G    +   EA+N
Sbjct: 602 --NVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALN 659

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           +   +      ++ H +T++V  L +     +A       I +    D +     +R   
Sbjct: 660 IRSRMSELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYY 719

Query: 509 EGGRTEEAYILYSQM 523
           E G  +EA  L+ ++
Sbjct: 720 ELGSIDEAIELHDEL 734


>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
 gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
 gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 500

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/403 (24%), Positives = 183/403 (45%), Gaps = 38/403 (9%)

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
           LP+ + F+  L  + KLN    V  +   +   G   ++  F  L++CFC+  R++ A  
Sbjct: 76  LPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALS 135

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
            LG M+ LG   S+  +  L++GF  + R   A  L +++V  G  PNVV Y ++I    
Sbjct: 136 CLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLC 195

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           E    + A   L  ++  G  PD+V +N LI  L   G++  +  +   ++ + + PD  
Sbjct: 196 EKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVI 255

Query: 362 TFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           TF +L+      G+     K    +    V  ++V YN+L++  C  G  ++A K+ N +
Sbjct: 256 TFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVL 315

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINV-------------------YQGIVMNNP- 458
           + KGF P+  ++  L+ G C A+++D+ + +                   YQG       
Sbjct: 316 VSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKF 375

Query: 459 ---------AVNAHVH------TAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
                     V+  VH        ++D L + G+  KA+         K  + +++Y + 
Sbjct: 376 SAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNII 435

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
           I+GL +  + E+A+ L+  +    V P+  TY  M++   ++R
Sbjct: 436 IKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKR 478



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 167/348 (47%), Gaps = 3/348 (0%)

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
           P++  F  LL    K+ +      L   +  LG S  + ++T LID F R  RL +A   
Sbjct: 77  PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSC 136

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
             KM++ G  P++VT+ SL+ GF     F  A S +D +   G+ P++V +N +ID L +
Sbjct: 137 LGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 196

Query: 338 MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVV 394
            G  + ALDV   + ++ + PD  T+ SL++ +  SG + +  +++  +    +  D++ 
Sbjct: 197 KGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVIT 256

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           ++AL+  + K G   +A K YN M+ +   P+  ++  L+ GLC    +DEA  V   +V
Sbjct: 257 FSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLV 316

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
                 NA  +  +++   +A R    +++      +    D  +Y    +G  + G+  
Sbjct: 317 SKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFS 376

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
            A  +  +M    V P+ YT+ ++L   C    I      L+D+  ++
Sbjct: 377 AAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSK 424



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/398 (24%), Positives = 188/398 (47%), Gaps = 9/398 (2%)

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNI 190
           Y  V+  F  +   G + + ++   ++D   +  R+ L +    K++K    P+ ++F  
Sbjct: 95  YEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGS 154

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +   C +N       ++  +V  G+ PNV ++  +++  C+ G++  A  +L  M  +G
Sbjct: 155 LVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMG 214

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF-MEAKMFSIA 309
               V  +  LI          ++  +   M++ G SP+V+T+++LI  +  E ++    
Sbjct: 215 IRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAK 274

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
             + +M++   + P++V +N LI+ L   G  D+A  V + L+     P++ T+ +L++ 
Sbjct: 275 KQYNEMIQRSVN-PNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLING 333

Query: 370 VCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
            C + R     K++C +    V+ D   YN L   +C+AG  + A K+   M+  G  PD
Sbjct: 334 YCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPD 393

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
            Y+F  LL GLC   KI +A+   + +  +   V    +  I+  L +A +   A  LF 
Sbjct: 394 MYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFC 453

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
              ++    DV++Y   + GL       EA+ LY +M+
Sbjct: 454 SLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQ 491



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 90/410 (21%), Positives = 168/410 (40%), Gaps = 72/410 (17%)

Query: 81  HDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLE 140
           HD+ SF  +I    R   R       +G++ ++G      TF   +  +     +   + 
Sbjct: 112 HDLYSFTTLIDCFCR-CARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMS 170

Query: 141 AFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLC 196
             D++   G+ PN    N ++D L + G+V+  + VLK  +     P+ +++N  +  L 
Sbjct: 171 LVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLF 230

Query: 197 K----------LNDV------------SNVKDVIGM-------------MVRKGFYPNVR 221
                      L+D+            S + DV G              M+++   PN+ 
Sbjct: 231 HSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIV 290

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            +  L+N  C  G + EA ++L ++++ G   +   +  LI+G+ + +R+D    +   M
Sbjct: 291 TYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVM 350

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
            ++G   +  TY +L +G+ +A  FS A   L  + S G  PD+   N+L+D L   G  
Sbjct: 351 SRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKI 410

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSY 401
             AL   + L + K V                                  ++ YN ++  
Sbjct: 411 GKALVRLEDLQKSKTV--------------------------------VGIITYNIIIKG 438

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
            CKA     A  L+ ++  KG +PD  +++ ++ GL   R   EA  +Y+
Sbjct: 439 LCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYR 488



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 86/175 (49%), Gaps = 4/175 (2%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCKLNDVSNV 204
           GF PN    N +++   K  RVD G+K+L    ++    +  ++N      C+    S  
Sbjct: 319 GFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAA 378

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
           + V+G MV  G +P++  F ILL+  C  G+I +A   L  +    T + +  + ++I G
Sbjct: 379 EKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKG 438

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
             +  +++ A YL+  +   G SP+V+TY +++ G    +++  A      ++ E
Sbjct: 439 LCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKE 493



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 71/334 (21%), Positives = 121/334 (36%), Gaps = 59/334 (17%)

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           L   G+L   +++ G   N+VT  SL      ++ FS    + + L S  H+        
Sbjct: 11  LTAKGFLHRHLLEKG---NLVTALSL--RICNSRAFSGRSDYRERLRSGLHSI------- 58

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE--- 387
                     ++DAL ++  + E   +P    F  LL  +    ++  +  L   LE   
Sbjct: 59  ---------KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLG 109

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
           +  DL  +  L+  FC+    + A+     M+  GF P   +F  L+ G C   +  EA+
Sbjct: 110 ISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAM 169

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
                              ++VD+++  G                Y  +VV Y   I  L
Sbjct: 170 -------------------SLVDQIVGLG----------------YEPNVVIYNTIIDSL 194

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
            E G+   A  +   MK + + P+  TY  ++          +  R+L D++   I  D 
Sbjct: 195 CEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDV 254

Query: 568 HTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            T   L     K      A  Q  EM    + P+
Sbjct: 255 ITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPN 288


>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Brachypodium distachyon]
          Length = 686

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 108/453 (23%), Positives = 201/453 (44%), Gaps = 14/453 (3%)

Query: 151 TPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKD 206
            PN F+ N+V+  L+K G     +K+  E      +PN +++N  +    K  D+ +   
Sbjct: 185 APNAFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFR 244

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
           +   M+R G  PNV  + +LL+  C+ GR+ E   +L  M +         +++L DG  
Sbjct: 245 LWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHS 304

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
           R         L+E+ V+ G      T + L+ G  +    S A   L  L + G     V
Sbjct: 305 RTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTV 364

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL 386
            +N LI+   ++G  + A  ++  +    + PD  T+ +L++ +    R +    LV  +
Sbjct: 365 IYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEM 424

Query: 387 E---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
           E   V   +  +N L+  + +AG   +   + + M +KG  P+  S+  ++   C   KI
Sbjct: 425 EKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKI 484

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
            EA+ +   + + +    A V+ AI+D  IE G   +A  L  +      P  +V+Y + 
Sbjct: 485 LEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLL 544

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           I+GL +  +  EA  L   +++  + P+  +Y  ++ + C   N      L +++    I
Sbjct: 545 IKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGI 604

Query: 564 ELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNL 596
           +     S R  + +F   SS     ++ EM NL
Sbjct: 605 K----PSPRTYRMLF---SSLGGAGRVHEMENL 630



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 111/511 (21%), Positives = 214/511 (41%), Gaps = 46/511 (9%)

Query: 107 VGELARVGC----VIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMD 162
           VG L R+GC       A ++ + +   W+       ++ FDEM      PN    N ++D
Sbjct: 172 VGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMID 231

Query: 163 VLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYP 218
              K G ++ G ++    L+    PN +++N+ L  LC+   +     V+  M  +   P
Sbjct: 232 GHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVP 291

Query: 219 N--------------------VRMFE---------------ILLNCFCKMGRIAEAYQLL 243
           +                    + +FE               ILLN  CK G+I++A ++L
Sbjct: 292 DGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVL 351

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
             ++  G   +   +  LI+G+ ++  L+ A  ++++M      P+ +TY +LI G  + 
Sbjct: 352 QTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKV 411

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
           +  + A   +  +E  G  P +   N LID   + G  +    +   + E  L P+  ++
Sbjct: 412 ERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSY 471

Query: 364 CSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
            S+++  C +G+      ++  +   +V     VYNA++  + + G  +QA  L   M  
Sbjct: 472 GSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKS 531

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
            G  P   ++  L++GLC   +I EA  +   +     A +   +  ++          +
Sbjct: 532 SGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDR 591

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
           A++L +            +Y +    L   GR  E   LY QM    V P +  Y +M+ 
Sbjct: 592 ALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVD 651

Query: 541 SFCKERNIKMVKRLLQDVIDARIELDYHTSI 571
           ++ K      V+ L +++ D  I +  +TS+
Sbjct: 652 AYAKCGEESKVEALRKEMSDKGIAVGDYTSM 682



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 103/457 (22%), Positives = 203/457 (44%), Gaps = 14/457 (3%)

Query: 47  ILAPHIVHSTLLNC---PSDLIALSFFIWCAKQRDYFH-DVQSFDHMISVVTRLTGRFET 102
           ++  HI ++T+++      DL +  F +W    R     +V +++ ++S + R  GR   
Sbjct: 219 VVPNHITYNTMIDGHIKKGDLES-GFRLWSQMLRHGLKPNVITYNVLLSGLCR-AGRMGE 276

Query: 103 VRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMD 162
              ++ E+A    V    T+ +    + R      +L  F+E  + G     +  +I+++
Sbjct: 277 TAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLN 336

Query: 163 VLFKIGRVDLGIKVLKETQLPNFLS----FNIALCNLCKLNDVSNVKDVIGMMVRKGFYP 218
            L K G++    +VL+       L     +N  +   C++ D+     +   M  +   P
Sbjct: 337 GLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRP 396

Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
           +   +  L+N   K+ RI EA+ L+  M   G + SV  +  LID + R  +L+    + 
Sbjct: 397 DHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIIL 456

Query: 279 EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
             M + G  PNVV+Y S++  F +      A + LD +  +   P    +N +ID   + 
Sbjct: 457 SDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIEC 516

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVY 395
           GS D A  + + +    + P   T+  L+  +C   + S   +L+  L    +  D++ Y
Sbjct: 517 GSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISY 576

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
           N L+S  C     ++A++L   M   G  P   ++  L   L GA ++ E  N+YQ ++ 
Sbjct: 577 NTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLD 636

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
            +    + ++  +VD   + G   K ++  R+ + +K
Sbjct: 637 KDVVPCSGIYNIMVDAYAKCGEESK-VEALRKEMSDK 672



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 71/329 (21%), Positives = 135/329 (41%), Gaps = 4/329 (1%)

Query: 234 GRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGC-SPNVVT 292
           GR A+      L++          W   +        LD A  +  +M  +G  +PN  +
Sbjct: 131 GRHADVRGAFELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFS 190

Query: 293 YTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
           Y  +I G  +A     A    D +  +   P+ + +N +ID   K G  +    ++  +L
Sbjct: 191 YNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQML 250

Query: 353 ELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV---CGLEVEADLVVYNALLSYFCKAGFPN 409
              L P+  T+  LLS +C +GR      ++      ++  D   Y+ L     + G   
Sbjct: 251 RHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQ 310

Query: 410 QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
             + L+   + KG     Y+   LL GLC   KI +A  V Q +V +       ++  ++
Sbjct: 311 TMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLI 370

Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
           +   + G    A  +F++        D ++Y   I GL +  R  EA+ L  +M+   V 
Sbjct: 371 NGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVN 430

Query: 530 PNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           P+  T+  ++ ++ +   ++    +L D+
Sbjct: 431 PSVETFNTLIDAYGRAGQLEKCFIILSDM 459



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/227 (18%), Positives = 98/227 (43%), Gaps = 4/227 (1%)

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF----SLLPKLVCGLEVEADLVV 394
           G + D    ++ L+  +  PD++T+   +    ++G       +L ++ C      +   
Sbjct: 131 GRHADVRGAFELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFS 190

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           YN +++   KAG    AVKL++ M +K   P++ ++  ++ G      ++    ++  ++
Sbjct: 191 YNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQML 250

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
            +    N   +  ++  L  AGR  +   +       K   D  +Y++   G    G ++
Sbjct: 251 RHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQ 310

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
               L+ +     V   AYT  ++L   CK+  I   + +LQ ++++
Sbjct: 311 TMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNS 357


>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 113/520 (21%), Positives = 223/520 (42%), Gaps = 20/520 (3%)

Query: 61  PSDLIALSFFIWCAKQRDYFHDVQSFDHMIS--------VVTRL------TGRFETVRGI 106
           PS+    S  + C  Q +    ++  + MI+        V T L       G  ++   +
Sbjct: 328 PSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNL 387

Query: 107 VGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK 166
             ++   G      T+ + +             E + +M   G  P+ F  N ++    K
Sbjct: 388 FNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLK 447

Query: 167 IGRVDLGIKVLKET---QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMF 223
               +   K+  E     + N  ++NI +  LCK   +     ++  MV +G  PNV  +
Sbjct: 448 APLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSY 507

Query: 224 EILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQ 283
             ++   C+ G +  A  +   M+      +V  +++LIDG  +    + A  L+++M+ 
Sbjct: 508 NDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLS 567

Query: 284 NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
              +P   T+ ++I G  +    S A   L     EG  P  + +N ++D   K G+ D 
Sbjct: 568 LNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDS 627

Query: 344 ALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLS 400
           AL VY  + E  + P+  T+ SL++  C S R  L  K    +    +E D+  Y+AL+ 
Sbjct: 628 ALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALID 687

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
            FCK      A  L+  +L+ G +P+   +  ++ G      ++ A+  Y+ ++ +    
Sbjct: 688 GFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPC 747

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
           +   +T ++D L++ GR   A  L+   + +    D++++ V + GL   G+ E A  + 
Sbjct: 748 DLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKIL 807

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
            +M    + P+   Y  ++  + +E N+K    L  +++D
Sbjct: 808 EEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLD 847



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 119/551 (21%), Positives = 246/551 (44%), Gaps = 11/551 (1%)

Query: 61  PSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQ 120
           PS ++ +   I CAK+ D+  D + F+++++   R   R E        +     +    
Sbjct: 168 PSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIR-ANRIENAIDCFNAMICQDVIPWVP 226

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET 180
              + L    R  M G + + +++M   G   + F  ++++    K GRV+   +  +ET
Sbjct: 227 YMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRET 286

Query: 181 QLPNFL----SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
           +         +++I +  +CK  + +   +++  M  +G+ P+   F  ++      G +
Sbjct: 287 KERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNM 346

Query: 237 AEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSL 296
            EA +L   MI  G  +++   T L+ G+     LD A  L+ K+ ++G  PN VTY+ L
Sbjct: 347 VEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVL 406

Query: 297 IKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
           I+G   +     A      ++  G  P +   N L+    K   +++A  ++D  ++   
Sbjct: 407 IEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG- 465

Query: 357 VPDSYTFCSLLSTVCLSGRF----SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAV 412
           V + +T+  ++S +C  G+     SLL  +V    V  ++V YN ++   C+ G  + A 
Sbjct: 466 VANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMV-PNVVSYNDMILGHCRKGNMDMAS 524

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
            +++ ML +   P+  ++  L+ G       ++A++++  ++  N A        I++ L
Sbjct: 525 SVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGL 584

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
            + G+  +A    +  + E +    ++Y   + G ++ G  + A  +Y +M    V PN 
Sbjct: 585 CKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNV 644

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVE 592
            TY  ++  FCK   I +  +   ++ +  +ELD      L     K     SA +   E
Sbjct: 645 VTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFE 704

Query: 593 MCNLGLIPDEM 603
           +  +GL P+ +
Sbjct: 705 LLEVGLSPNRI 715



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 108/432 (25%), Positives = 182/432 (42%), Gaps = 45/432 (10%)

Query: 125 FLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KET 180
            LR Y +  ++    + FDE    G   N F  NI+M  L K G++D    +L     + 
Sbjct: 441 LLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQG 499

Query: 181 QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILL------------- 227
            +PN +S+N  +   C+  ++     V   M+ +   PNV  + IL+             
Sbjct: 500 MVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKAL 559

Query: 228 ----------------------NCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF 265
                                 N  CK+G+++EA   L   +  G   S   +  ++DGF
Sbjct: 560 DLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGF 619

Query: 266 RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL 325
            +   +D A  ++ +M + G SPNVVTYTSLI GF ++    +A    D +  +G   D+
Sbjct: 620 IKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDV 679

Query: 326 VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV----CLSGRFSLLPK 381
             ++ LID   K    + A D++  LLE+ L P+   + S++S       +        K
Sbjct: 680 TAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKK 739

Query: 382 LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
           ++    +  DL  Y  L+    K G    A  LY  ML KG  PD  +F  L+ GLC   
Sbjct: 740 MI-NDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKG 798

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYT 501
           +++ A  + + +   N   +  ++  ++      G   +A  L    +      D V+Y 
Sbjct: 799 QLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYD 858

Query: 502 VAIRGLLEGGRT 513
           + I G  +G R+
Sbjct: 859 ILINGKFKGDRS 870


>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 113/520 (21%), Positives = 223/520 (42%), Gaps = 20/520 (3%)

Query: 61  PSDLIALSFFIWCAKQRDYFHDVQSFDHMIS--------VVTRL------TGRFETVRGI 106
           PS+    S  + C  Q +    ++  + MI+        V T L       G  ++   +
Sbjct: 288 PSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNL 347

Query: 107 VGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK 166
             ++   G      T+ + +             E + +M   G  P+ F  N ++    K
Sbjct: 348 FNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLK 407

Query: 167 IGRVDLGIKVLKET---QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMF 223
               +   K+  E     + N  ++NI +  LCK   +     ++  MV +G  PNV  +
Sbjct: 408 APLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSY 467

Query: 224 EILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQ 283
             ++   C+ G +  A  +   M+      +V  +++LIDG  +    + A  L+++M+ 
Sbjct: 468 NDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLS 527

Query: 284 NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
              +P   T+ ++I G  +    S A   L     EG  P  + +N ++D   K G+ D 
Sbjct: 528 LNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDS 587

Query: 344 ALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLS 400
           AL VY  + E  + P+  T+ SL++  C S R  L  K    +    +E D+  Y+AL+ 
Sbjct: 588 ALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALID 647

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
            FCK      A  L+  +L+ G +P+   +  ++ G      ++ A+  Y+ ++ +    
Sbjct: 648 GFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPC 707

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
           +   +T ++D L++ GR   A  L+   + +    D++++ V + GL   G+ E A  + 
Sbjct: 708 DLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKIL 767

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
            +M    + P+   Y  ++  + +E N+K    L  +++D
Sbjct: 768 EEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLD 807



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 119/551 (21%), Positives = 246/551 (44%), Gaps = 11/551 (1%)

Query: 61  PSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQ 120
           PS ++ +   I CAK+ D+  D + F+++++   R   R E        +     +    
Sbjct: 128 PSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIR-ANRIENAIDCFNAMICQDVIPWVP 186

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET 180
              + L    R  M G + + +++M   G   + F  ++++    K GRV+   +  +ET
Sbjct: 187 YMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRET 246

Query: 181 QLPNFL----SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
           +         +++I +  +CK  + +   +++  M  +G+ P+   F  ++      G +
Sbjct: 247 KERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNM 306

Query: 237 AEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSL 296
            EA +L   MI  G  +++   T L+ G+     LD A  L+ K+ ++G  PN VTY+ L
Sbjct: 307 VEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVL 366

Query: 297 IKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
           I+G   +     A      ++  G  P +   N L+    K   +++A  ++D  ++   
Sbjct: 367 IEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG- 425

Query: 357 VPDSYTFCSLLSTVCLSGRF----SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAV 412
           V + +T+  ++S +C  G+     SLL  +V    V  ++V YN ++   C+ G  + A 
Sbjct: 426 VANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMV-PNVVSYNDMILGHCRKGNMDMAS 484

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
            +++ ML +   P+  ++  L+ G       ++A++++  ++  N A        I++ L
Sbjct: 485 SVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGL 544

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
            + G+  +A    +  + E +    ++Y   + G ++ G  + A  +Y +M    V PN 
Sbjct: 545 CKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNV 604

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVE 592
            TY  ++  FCK   I +  +   ++ +  +ELD      L     K     SA +   E
Sbjct: 605 VTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFE 664

Query: 593 MCNLGLIPDEM 603
           +  +GL P+ +
Sbjct: 665 LLEVGLSPNRI 675



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 110/437 (25%), Positives = 182/437 (41%), Gaps = 55/437 (12%)

Query: 125 FLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KET 180
            LR Y +  ++    + FDE    G   N F  NI+M  L K G++D    +L     + 
Sbjct: 401 LLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQG 459

Query: 181 QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILL------------- 227
            +PN +S+N  +   C+  ++     V   M+ +   PNV  + IL+             
Sbjct: 460 MVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKAL 519

Query: 228 ----------------------NCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF 265
                                 N  CK+G+++EA   L   +  G   S   +  ++DGF
Sbjct: 520 DLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGF 579

Query: 266 RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL 325
            +   +D A  ++ +M + G SPNVVTYTSLI GF ++    +A    D +  +G   D+
Sbjct: 580 IKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDV 639

Query: 326 VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCG 385
             ++ LID   K    + A D++  LLE+ L P+   + S++S       F  L  +   
Sbjct: 640 TAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISG------FRDLNNMEAA 693

Query: 386 L---------EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
           L          +  DL  Y  L+    K G    A  LY  ML KG  PD  +F  L+ G
Sbjct: 694 LVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNG 753

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
           LC   +++ A  + + +   N   +  ++  ++      G   +A  L    +      D
Sbjct: 754 LCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPD 813

Query: 497 VVSYTVAIRGLLEGGRT 513
            V+Y + I G  +G R+
Sbjct: 814 DVTYDILINGKFKGDRS 830


>gi|357142282|ref|XP_003572519.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 706

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/441 (23%), Positives = 190/441 (43%), Gaps = 7/441 (1%)

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           +V E+ R        TF + +  + +  +    +   D M + G TP     N ++    
Sbjct: 212 LVEEMTRNDSPPDDLTFGMLIHSFCQSGLVDRAMGILDRMSKCGCTPGAIVYNEIISCFA 271

Query: 166 KIGRVDLGIKVLKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFE 224
           ++GRV   + +       P+  S+N  L  LC+     +  ++I  MVRK   P+   F 
Sbjct: 272 ELGRVKEALHLFSCMPCKPDIFSYNAVLKGLCRAERWEDAGELITEMVRKDCSPDEVTFN 331

Query: 225 ILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN 284
            +++  C  G +  A +++  M   G       ++ LI+ F     ++ A  L   M   
Sbjct: 332 TVISFLCHKGLVDCALEVVDQMPKYGRKPDNFTYSALINAFSEQGCVEDALELLRSMP-- 389

Query: 285 GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
            CSPN V Y S++KG      +      +  +     APD +   ++IDCL + G  D  
Sbjct: 390 -CSPNTVCYKSVLKGLCRDGQWEDVGQLIGEMVRNDCAPDEMVFGLIIDCLCQRGLVDCG 448

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCK 404
           L+V   +      PD   + SLL+     GR     KL   +  + + V YN +L   CK
Sbjct: 449 LEVLQEVPNYGCSPDVVMYTSLLNGFAEYGRVDDSLKLFKSMTCKPNTVTYNYVLMGLCK 508

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV 464
                 A KL + M+ +   P+  +F  L+  LC    ++ AI+V++ + M     N  +
Sbjct: 509 VELWEDAGKLIDEMVGQECPPNEMTFSILISSLCQKGLVECAIDVFEKMQMYGCTPNVII 568

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
           ++ + + L E G    A++L      +    D + Y+ A++GL      E+A  L  +M 
Sbjct: 569 YSTLNNGLSEKGCVDNALKLLNNMSCKA---DTICYSSALKGLCRAELWEDAGELIVEMF 625

Query: 525 HIAVPPNAYTYRVMLLSFCKE 545
               PP+  T+ +++ + C++
Sbjct: 626 RKDCPPDEVTFSIIITNLCQQ 646



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/445 (22%), Positives = 206/445 (46%), Gaps = 13/445 (2%)

Query: 52  IVHSTLLNCPSDL----IALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIV 107
           IV++ +++C ++L     AL  F     + D F    S++ ++  + R   R+E    ++
Sbjct: 261 IVYNEIISCFAELGRVKEALHLFSCMPCKPDIF----SYNAVLKGLCRAE-RWEDAGELI 315

Query: 108 GELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKI 167
            E+ R  C     TF   +       +    LE  D+M ++G  P+ F  + +++   + 
Sbjct: 316 TEMVRKDCSPDEVTFNTVISFLCHKGLVDCALEVVDQMPKYGRKPDNFTYSALINAFSEQ 375

Query: 168 GRVDLGIKVLKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEIL 226
           G V+  +++L+     PN + +   L  LC+     +V  +IG MVR    P+  +F ++
Sbjct: 376 GCVEDALELLRSMPCSPNTVCYKSVLKGLCRDGQWEDVGQLIGEMVRNDCAPDEMVFGLI 435

Query: 227 LNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGC 286
           ++C C+ G +    ++L  +   G S  V  +T L++GF    R+D +  L++ M    C
Sbjct: 436 IDCLCQRGLVDCGLEVLQEVPNYGCSPDVVMYTSLLNGFAEYGRVDDSLKLFKSMT---C 492

Query: 287 SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALD 346
            PN VTY  ++ G  + +++  A   +D +  +   P+ +  ++LI  L + G  + A+D
Sbjct: 493 KPNTVTYNYVLMGLCKVELWEDAGKLIDEMVGQECPPNEMTFSILISSLCQKGLVECAID 552

Query: 347 VYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAG 406
           V++ +      P+   + +L + +   G      KL+  +  +AD + Y++ L   C+A 
Sbjct: 553 VFEKMQMYGCTPNVIIYSTLNNGLSEKGCVDNALKLLNNMSCKADTICYSSALKGLCRAE 612

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
               A +L   M  K   PD  +F  ++  LC    ++ A  V   ++      N  +++
Sbjct: 613 LWEDAGELIVEMFRKDCPPDEVTFSIIITNLCQQGFVEYATEVSDLMLKYECTPNIVIYS 672

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVE 491
           ++++   E G    A++L R    E
Sbjct: 673 SLINGFSEHGHLEDALKLLRSMPCE 697



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 85/363 (23%), Positives = 166/363 (45%), Gaps = 6/363 (1%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           PN  ++N  L  LC      + ++++  M R    P+   F +L++ FC+ G +  A  +
Sbjct: 188 PNSYAYNTLLKGLCSAKQWGDAEELVEEMTRNDSPPDDLTFGMLIHSFCQSGLVDRAMGI 247

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           L  M   G +     +  +I  F  L R+  A +L+  M    C P++ +Y +++KG   
Sbjct: 248 LDRMSKCGCTPGAIVYNEIISCFAELGRVKEALHLFSCMP---CKPDIFSYNAVLKGLCR 304

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
           A+ +  A   +  +  +  +PD V  N +I  L   G  D AL+V D + +    PD++T
Sbjct: 305 AERWEDAGELITEMVRKDCSPDEVTFNTVISFLCHKGLVDCALEVVDQMPKYGRKPDNFT 364

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
           + +L++     G      +L+  +    + V Y ++L   C+ G      +L   M+   
Sbjct: 365 YSALINAFSEQGCVEDALELLRSMPCSPNTVCYKSVLKGLCRDGQWEDVGQLIGEMVRND 424

Query: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI 482
             PD   F  ++  LC    +D  + V Q +     + +  ++T++++   E GR   ++
Sbjct: 425 CAPDEMVFGLIIDCLCQRGLVDCGLEVLQEVPNYGCSPDVVMYTSLLNGFAEYGRVDDSL 484

Query: 483 QLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
           +LF+    +    + V+Y   + GL +    E+A  L  +M     PPN  T+ +++ S 
Sbjct: 485 KLFKSMTCKP---NTVTYNYVLMGLCKVELWEDAGKLIDEMVGQECPPNEMTFSILISSL 541

Query: 543 CKE 545
           C++
Sbjct: 542 CQK 544



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 94/454 (20%), Positives = 196/454 (43%), Gaps = 45/454 (9%)

Query: 141 AFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLND 200
           A   +G     P      +++  L   GR+     VL+ ++  + +  N  +   C+   
Sbjct: 80  ALQLVGSMSEPPAVVPCTLLIKKLCAAGRLADAEGVLRASEAADAVDHNTLVAGYCRAGR 139

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
           +++ + ++  +   G   +V  +  L+  +C+ GR+ +A  L+  M     S    A+  
Sbjct: 140 LADAERMLRSLAASGAA-DVVTYNTLIAGYCRGGRLEDARLLVASMPPAPNSY---AYNT 195

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           L+ G    ++   A  L E+M +N   P+ +T+  LI  F ++ +   A   LD +   G
Sbjct: 196 LLKGLCSAKQWGDAEELVEEMTRNDSPPDDLTFGMLIHSFCQSGLVDRAMGILDRMSKCG 255

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
             P  + +N +I C +++G   +AL ++  +      PD +++ ++L  +C + R+    
Sbjct: 256 CTPGAIVYNEIISCFAELGRVKEALHLFSCM---PCKPDIFSYNAVLKGLCRAERWEDAG 312

Query: 381 KLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL---- 433
           +L+  +   +   D V +N ++S+ C  G  + A+++ + M   G  PDN+++  L    
Sbjct: 313 ELITEMVRKDCSPDEVTFNTVISFLCHKGLVDCALEVVDQMPKYGRKPDNFTYSALINAF 372

Query: 434 ----------------------------LRGLCGARKIDEAINVYQGIVMNNPAVNAHVH 465
                                       L+GLC   + ++   +   +V N+ A +  V 
Sbjct: 373 SEQGCVEDALELLRSMPCSPNTVCYKSVLKGLCRDGQWEDVGQLIGEMVRNDCAPDEMVF 432

Query: 466 TAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKH 525
             I+D L + G     +++ +         DVV YT  + G  E GR +++  L+   K 
Sbjct: 433 GLIIDCLCQRGLVDCGLEVLQEVPNYGCSPDVVMYTSLLNGFAEYGRVDDSLKLF---KS 489

Query: 526 IAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           +   PN  TY  +L+  CK    +   +L+ +++
Sbjct: 490 MTCKPNTVTYNYVLMGLCKVELWEDAGKLIDEMV 523



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 103/474 (21%), Positives = 198/474 (41%), Gaps = 23/474 (4%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKE-TQLPNFLSFNIALCNLCKLNDVSNVKDVIGM 210
           P   A N  +    ++G +D  ++++   ++ P  +   + +  LC    +++ + V+  
Sbjct: 59  PRRGAANDRLHHFIRLGDLDAALQLVGSMSEPPAVVPCTLLIKKLCAAGRLADAEGVL-- 116

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
             R     +      L+  +C+ GR+A+A ++L  +   G +  V  +  LI G+ R  R
Sbjct: 117 --RASEAADAVDHNTLVAGYCRAGRLADAERMLRSLAASGAA-DVVTYNTLIAGYCRGGR 173

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           L+ A  L   M     +PN   Y +L+KG   AK +  A   ++ +      PD +   +
Sbjct: 174 LEDARLLVASMPP---APNSYAYNTLLKGLCSAKQWGDAEELVEEMTRNDSPPDDLTFGM 230

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA 390
           LI    + G  D A+ + D + +    P +  +  ++S     GR      L   +  + 
Sbjct: 231 LIHSFCQSGLVDRAMGILDRMSKCGCTPGAIVYNEIISCFAELGRVKEALHLFSCMPCKP 290

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           D+  YNA+L   C+A     A +L   M+ K  +PD  +F  ++  LC    +D A+ V 
Sbjct: 291 DIFSYNAVLKGLCRAERWEDAGELITEMVRKDCSPDEVTFNTVISFLCHKGLVDCALEVV 350

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
             +       +   ++A+++   E G    A++L R         + V Y   ++GL   
Sbjct: 351 DQMPKYGRKPDNFTYSALINAFSEQGCVEDALELLRSMPCSP---NTVCYKSVLKGLCRD 407

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD--YH 568
           G+ E+   L  +M      P+   + +++   C+   +     +LQ+V +     D   +
Sbjct: 408 GQWEDVGQLIGEMVRNDCAPDEMVFGLIIDCLCQRGLVDCGLEVLQEVPNYGCSPDVVMY 467

Query: 569 TSI--------RLTKFIFKFHSSSSAVNQLV-EMCNLGLIPDEMWRKLGLLSDE 613
           TS+        R+   +  F S +   N +      +GL   E+W   G L DE
Sbjct: 468 TSLLNGFAEYGRVDDSLKLFKSMTCKPNTVTYNYVLMGLCKVELWEDAGKLIDE 521



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/298 (24%), Positives = 135/298 (45%), Gaps = 4/298 (1%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G++E V  ++GE+ R  C      F L +    +  +    LE   E+  +G +P+    
Sbjct: 408 GQWEDVGQLIGEMVRNDCAPDEMVFGLIIDCLCQRGLVDCGLEVLQEVPNYGCSPDVVMY 467

Query: 158 NIVMDVLFKIGRVDLGIKVLKE-TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
             +++   + GRVD  +K+ K  T  PN +++N  L  LCK+    +   +I  MV +  
Sbjct: 468 TSLLNGFAEYGRVDDSLKLFKSMTCKPNTVTYNYVLMGLCKVELWEDAGKLIDEMVGQEC 527

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
            PN   F IL++  C+ G +  A  +   M   G + +V  ++ L +G      +D A  
Sbjct: 528 PPNEMTFSILISSLCQKGLVECAIDVFEKMQMYGCTPNVIIYSTLNNGLSEKGCVDNALK 587

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           L   M    C  + + Y+S +KG   A+++  A   +  +  +   PD V  +++I  L 
Sbjct: 588 LLNNM---SCKADTICYSSALKGLCRAELWEDAGELIVEMFRKDCPPDEVTFSIIITNLC 644

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVV 394
           + G  + A +V D +L+ +  P+   + SL++     G      KL+  +  E D  V
Sbjct: 645 QQGFVEYATEVSDLMLKYECTPNIVIYSSLINGFSEHGHLEDALKLLRSMPCEPDTSV 702


>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 113/469 (24%), Positives = 209/469 (44%), Gaps = 16/469 (3%)

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNI 190
           Y  V+  F ++   G  PN  + +I+++    +G++        K+LK    PN ++   
Sbjct: 87  YPTVISLFYQLEFNGIKPNIVSLSILINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTT 146

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +   C  + V         ++  GF+ N   +  L+N  CK+G    A Q+L  +    
Sbjct: 147 LVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKL 206

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
            S  V  ++ +IDG  + + ++ A  L+ +M+    SP VVT  SLI G+     F  AF
Sbjct: 207 VSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAF 266

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
             L  +  +   PD+   N+L+D L K G   +A      +++  ++PD  T+ SL+   
Sbjct: 267 GLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGY 326

Query: 371 CLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           CL              EV     VY+ +++ FCK    ++A+ L+  M  +   PD  ++
Sbjct: 327 CLVN------------EVNKAKHVYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTY 374

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             L+ GLC + +I  A  +   +  +    +   + +++D L +     KAI L ++   
Sbjct: 375 NSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKD 434

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
           +   LD+ +Y + I GL + GR ++A +++  +         +TY +M+   C E  +  
Sbjct: 435 QGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNE 494

Query: 551 VKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLI 599
            + LL  + D     D  T   + + +F+   +  A   L EM   GL+
Sbjct: 495 AETLLSKMEDNGCVPDAVTCETIIRALFENDKNERAEKLLREMIARGLL 543



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/391 (25%), Positives = 180/391 (46%), Gaps = 20/391 (5%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+ + F   L +L KL     V  +   +   G  PN+    IL+NC+C +G++  A+ +
Sbjct: 69  PSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCHLGQMRFAFSI 128

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
              ++ +G   +    T L+ GF    ++  A +  + ++  G   N V+Y +LI G  +
Sbjct: 129 FAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLCK 188

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
                 A   L  +E +  + D+V ++ +ID L K    +DA ++Y  ++  ++ P   T
Sbjct: 189 IGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVT 248

Query: 363 FCSLLSTVCLSGRFS----LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
             SL+   C+ G+F     LL ++V    +  D+  +N L+   CK G   +A      M
Sbjct: 249 LNSLIYGYCIVGQFKEAFGLLREMVLK-NINPDVYTFNILVDALCKEGKIKEAKSGIAVM 307

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
           + +G  PD  ++  L+ G C   ++++A +VY  +      +N      +VD        
Sbjct: 308 MKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIV------INGFCKIKMVD-------- 353

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
            KA+ LF      +   D V+Y   I GL + GR   A+ L  +M+    P +  TY  +
Sbjct: 354 -KALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSL 412

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
           + + CK  ++     L++ + D  I+LD +T
Sbjct: 413 IDALCKNHHVDKAIALVKKIKDQGIQLDMYT 443



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 69/305 (22%), Positives = 133/305 (43%), Gaps = 17/305 (5%)

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNAL 398
           DD +  +  +L L   P    F  +LS++     +  +  L   LE   ++ ++V  + L
Sbjct: 53  DDLVSSFHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSIL 112

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           ++ +C  G    A  ++  +L  G+ P+  +   L++G C   K+ EA++ +  ++    
Sbjct: 113 INCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGF 172

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
             N   +  +++ L + G    A+Q+ R+   +    DVV Y+  I GL +     +AY 
Sbjct: 173 HFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYE 232

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
           LYS+M    + P   T   ++  +C     K    LL++++   I  D +T   L   + 
Sbjct: 233 LYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALC 292

Query: 579 KFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTPVSLFDGF--VPCERRAGNANH 636
           K      A + +  M   G++PD             +T  SL DG+  V    +A +   
Sbjct: 293 KEGKIKEAKSGIAVMMKEGVMPD------------VVTYSSLMDGYCLVNEVNKAKHVYS 340

Query: 637 LLLNG 641
           +++NG
Sbjct: 341 IVING 345



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 88/178 (49%), Gaps = 4/178 (2%)

Query: 129 YWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET----QLPN 184
           + + +M    L  F EM      P+T   N ++D L K GR+    +++ E     Q  +
Sbjct: 346 FCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPAD 405

Query: 185 FLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLG 244
            +++N  +  LCK + V     ++  +  +G   ++  + IL++  CK GR+ +A  +  
Sbjct: 406 IITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQ 465

Query: 245 LMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
            ++  G +L+V  +T++I+G      L+ A  L  KM  NGC P+ VT  ++I+   E
Sbjct: 466 DLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRALFE 523


>gi|224144580|ref|XP_002325338.1| predicted protein [Populus trichocarpa]
 gi|222862213|gb|EEE99719.1| predicted protein [Populus trichocarpa]
          Length = 481

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/427 (24%), Positives = 196/427 (45%), Gaps = 38/427 (8%)

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           N  L NLCK   +     +I +M R    PN      L+    ++GRI  A ++L  M+ 
Sbjct: 26  NEILHNLCKKGSLMEATKLIDIMSRVNQIPNSTCSTNLIRGLVRIGRIERASRVLKTMVM 85

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
            G    V  + +++ GF + R+L  A  L E M  +GC P+V+TY ++I+   +   F  
Sbjct: 86  SGLVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDNGKFDQ 145

Query: 309 AFSF--------------------------------LDMLES---EGHAPDLVFHNVLID 333
           A  F                                L++LE    EG  PDLV +N L++
Sbjct: 146 AVEFWRGQLRRGCLPYLIPYTILIELVWKHCGTVRALEVLEDMAIEGCYPDLVTYNSLVN 205

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA--- 390
             SK G Y+DA  +   +L   + P++ T+ SLL ++C  G +  + +++  ++  +   
Sbjct: 206 FASKEGKYEDAALIIYNILSHGMEPNAITYNSLLHSLCSCGLWDEVDEILAIMKKTSHPP 265

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
            +V YN L++  CK G   +A+  +  M+ +  +PD  ++  LL  LC    +DEA+ V+
Sbjct: 266 TVVTYNILINGLCKCGLVERAINFFVQMVSENCSPDIITYNTLLTALCKEGMVDEALQVF 325

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
             +  +N +     +  ++D L   G   +A++L+ + I +    D +++   + G    
Sbjct: 326 VLLSDSNCSPGLITYNTVIDGLTRRGYMDEALKLYNQMIEKGIAPDGITHRSLVWGFCWI 385

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
            + E+A  +  +M       N+  YR+++   C+ + + +  ++L+ +I  R + D    
Sbjct: 386 DQVEDAVEILREMGKRDHRINSSAYRLVINGLCRNKRVDIAIQVLEMMISGRYKPDEEIY 445

Query: 571 IRLTKFI 577
             L K +
Sbjct: 446 STLIKSV 452



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 99/437 (22%), Positives = 192/437 (43%), Gaps = 53/437 (12%)

Query: 136 GMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSF 188
           G ++EA    D M R    PN+     ++  L +IGR++   +VLK   +    P+ +++
Sbjct: 36  GSLMEATKLIDIMSRVNQIPNSTCSTNLIRGLVRIGRIERASRVLKTMVMSGLVPDVITY 95

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           N+ +   CK   + +  D++  M   G  P+V  +  ++      G+  +A +     + 
Sbjct: 96  NMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDNGKFDQAVEFWRGQLR 155

Query: 249 LGTSLSVNAWTVLID-------GFRRLRRL-DMA-------------------------- 274
            G    +  +T+LI+         R L  L DMA                          
Sbjct: 156 RGCLPYLIPYTILIELVWKHCGTVRALEVLEDMAIEGCYPDLVTYNSLVNFASKEGKYED 215

Query: 275 -GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
              +   ++ +G  PN +TY SL+       ++      L +++   H P +V +N+LI+
Sbjct: 216 AALIIYNILSHGMEPNAITYNSLLHSLCSCGLWDEVDEILAIMKKTSHPPTVVTYNILIN 275

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-------FSLLPKLVCGL 386
            L K G  + A++ +  ++     PD  T+ +LL+ +C  G        F LL    C  
Sbjct: 276 GLCKCGLVERAINFFVQMVSENCSPDIITYNTLLTALCKEGMVDEALQVFVLLSDSNCS- 334

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
                L+ YN ++    + G+ ++A+KLYN M++KG  PD  +   L+ G C   ++++A
Sbjct: 335 ---PGLITYNTVIDGLTRRGYMDEALKLYNQMIEKGIAPDGITHRSLVWGFCWIDQVEDA 391

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
           + + + +   +  +N+  +  +++ L    R   AIQ+    I  +Y  D   Y+  I+ 
Sbjct: 392 VEILREMGKRDHRINSSAYRLVINGLCRNKRVDIAIQVLEMMISGRYKPDEEIYSTLIKS 451

Query: 507 LLEGGRTEEAYILYSQM 523
           + + G  EEA  L+ ++
Sbjct: 452 VADAGMVEEADELHQKL 468



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/388 (19%), Positives = 168/388 (43%), Gaps = 36/388 (9%)

Query: 109 ELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIG 168
           +++  GC     T+   +R  +    +   +E +    R G  P      I++++++K  
Sbjct: 117 DMSLSGCPPDVITYNTIIRSLFDNGKFDQAVEFWRGQLRRGCLPYLIPYTILIELVWKHC 176

Query: 169 RVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFE 224
                ++VL++  +    P+ +++N  +    K     +   +I  ++  G  PN   + 
Sbjct: 177 GTVRALEVLEDMAIEGCYPDLVTYNSLVNFASKEGKYEDAALIIYNILSHGMEPNAITYN 236

Query: 225 ILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN 284
            LL+  C  G   E  ++L +M       +V  + +LI+G  +   ++ A   + +MV  
Sbjct: 237 SLLHSLCSCGLWDEVDEILAIMKKTSHPPTVVTYNILINGLCKCGLVERAINFFVQMVSE 296

Query: 285 GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
            CSP+++TY +L+    +  M   A     +L     +P L+ +N +ID L++ G  D+A
Sbjct: 297 NCSPDIITYNTLLTALCKEGMVDEALQVFVLLSDSNCSPGLITYNTVIDGLTRRGYMDEA 356

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCK 404
           L +Y+ ++E  + PD  T                                + +L+  FC 
Sbjct: 357 LKLYNQMIEKGIAPDGIT--------------------------------HRSLVWGFCW 384

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV 464
                 AV++   M  +    ++ ++  ++ GLC  +++D AI V + ++      +  +
Sbjct: 385 IDQVEDAVEILREMGKRDHRINSSAYRLVINGLCRNKRVDIAIQVLEMMISGRYKPDEEI 444

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           ++ ++  + +AG   +A +L ++ I  K
Sbjct: 445 YSTLIKSVADAGMVEEADELHQKLIERK 472



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 60/282 (21%), Positives = 124/282 (43%), Gaps = 5/282 (1%)

Query: 80  FHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVL 139
           + D+ +++ +++  ++  G++E    I+  +   G    A T+   L       ++  V 
Sbjct: 194 YPDLVTYNSLVNFASK-EGKYEDAALIIYNILSHGMEPNAITYNSLLHSLCSCGLWDEVD 252

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNL 195
           E    M +    P     NI+++ L K G V+  I    +++ E   P+ +++N  L  L
Sbjct: 253 EILAIMKKTSHPPTVVTYNILINGLCKCGLVERAINFFVQMVSENCSPDIITYNTLLTAL 312

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
           CK   V     V  ++      P +  +  +++   + G + EA +L   MI  G +   
Sbjct: 313 CKEGMVDEALQVFVLLSDSNCSPGLITYNTVIDGLTRRGYMDEALKLYNQMIEKGIAPDG 372

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
                L+ GF  + +++ A  +  +M +     N   Y  +I G    K   IA   L+M
Sbjct: 373 ITHRSLVWGFCWIDQVEDAVEILREMGKRDHRINSSAYRLVINGLCRNKRVDIAIQVLEM 432

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
           + S  + PD   ++ LI  ++  G  ++A +++  L+E K++
Sbjct: 433 MISGRYKPDEEIYSTLIKSVADAGMVEEADELHQKLIERKVL 474



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 112/241 (46%), Gaps = 10/241 (4%)

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
           SI F+   ++E++    + + HN     L K GS  +A  + D +  +  +P+S    +L
Sbjct: 9   SILFADGPLVENDEETNNEILHN-----LCKKGSLMEATKLIDIMSRVNQIPNSTCSTNL 63

Query: 367 LSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           +  +   GR     +++  + +     D++ YN ++  FCK      A+ L   M   G 
Sbjct: 64  IRGLVRIGRIERASRVLKTMVMSGLVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSGC 123

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
            PD  ++  ++R L    K D+A+  ++G +          +T +++ + +     +A++
Sbjct: 124 PPDVITYNTIIRSLFDNGKFDQAVEFWRGQLRRGCLPYLIPYTILIELVWKHCGTVRALE 183

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE-AYILYSQMKHIAVPPNAYTYRVMLLSF 542
           +     +E    D+V+Y   +    + G+ E+ A I+Y+ + H  + PNA TY  +L S 
Sbjct: 184 VLEDMAIEGCYPDLVTYNSLVNFASKEGKYEDAALIIYNILSH-GMEPNAITYNSLLHSL 242

Query: 543 C 543
           C
Sbjct: 243 C 243


>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
          Length = 601

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 107/461 (23%), Positives = 204/461 (44%), Gaps = 22/461 (4%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           PN +S+ + +  LC          ++  M   G   +V  +  L+   C    +  A +L
Sbjct: 113 PNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALEL 172

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           LG M   G   +V  ++ L+ G+ R  R      ++E+M + G  P+V+ +T  I    +
Sbjct: 173 LGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCK 232

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
                 A    D++   G  P++V +NVLI+CL K GS  +AL + + + +  + PD  T
Sbjct: 233 KGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVT 292

Query: 363 FCSLLSTVC----LSGRFSLLPKLVCGLE-VEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
           + +L++ +     + G   LL +++ G   VE D+V +N+++   CK G   QA+ +   
Sbjct: 293 YNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREM 352

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           M ++G   +  ++  L+ G     K++ A+N+   ++ +    ++  ++ +++   +   
Sbjct: 353 MAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWE 412

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
             +A    R         ++  Y   +  L + G  E+A +L+++M  +    +A  Y  
Sbjct: 413 VDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEM-DMNCGLDAVAYST 471

Query: 538 MLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLG 597
           M+   CK  +IK  K+LLQD++D  +  D  T   L     K      A   L +M   G
Sbjct: 472 MMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASG 531

Query: 598 LIPDEMWRKLGLLSDETMTPVSLFDGFVPCERRAGNANHLL 638
            +PD                V++FD  +      G  N +L
Sbjct: 532 FVPD----------------VAVFDSLIKGYSAEGQINKIL 556



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 109/483 (22%), Positives = 212/483 (43%), Gaps = 48/483 (9%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDV 207
           PN  +  +VM  L    R D  + +L+  Q      + +++   +  LC   ++    ++
Sbjct: 113 PNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALEL 172

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
           +G M   G +PNV ++  LL  +C+ GR  +  ++   M  LG    V  +T  ID   +
Sbjct: 173 LGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCK 232

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
             R+  A  + + MVQ G  PNVVTY  LI    +      A +  + ++ +G APD+V 
Sbjct: 233 KGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVT 292

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLV--PDSYTFCSLLSTVCLSGRFSL---LPKL 382
           +N LI  LS +   D A+ + + +++   +  PD  TF S++  +C  GR      + ++
Sbjct: 293 YNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREM 352

Query: 383 VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF------------ 430
           +       +LV YN L+  F +    N A+ L + ++  G  PD++++            
Sbjct: 353 MAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWE 412

Query: 431 -----------------------VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTA 467
                                  + LL  LC    +++A+ ++  + MN   ++A  ++ 
Sbjct: 413 VDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMNC-GLDAVAYST 471

Query: 468 IVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIA 527
           ++    ++G    A QL +  + E    D V+Y++ I    + G  EEA  +  QM    
Sbjct: 472 MMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASG 531

Query: 528 VPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH---TSIRLTKFIFKFHSSS 584
             P+   +  ++  +  E  I  +  L+ ++    + +D     T +RL + +    S++
Sbjct: 532 FVPDVAVFDSLIKGYSAEGQINKILDLIHEMRAKNVAIDPKFICTLVRLPQQMPLLWSAT 591

Query: 585 SAV 587
           +A+
Sbjct: 592 TAL 594



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 100/403 (24%), Positives = 174/403 (43%), Gaps = 16/403 (3%)

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           ++GE+   G       +   LR Y R   +  V + F+EM R G  P+       +D L 
Sbjct: 172 LLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLC 231

Query: 166 KIGRVDLGIKV----LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
           K GR+   +KV    ++    PN +++N+ +  LCK   V     +   M  KG  P+V 
Sbjct: 232 KKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVV 291

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT--VLIDGFRRLRRLDMAGYLWE 279
            +  L+     +  +  A  LL  MI   T +  +  T   +I G  ++ R+  A  + E
Sbjct: 292 TYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVRE 351

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
            M + GC  N+VTY  LI GF+     ++A + +  L S G  PD   +++LI+  SK+ 
Sbjct: 352 MMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLW 411

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV------CGLEVEADLV 393
             D A      + +  +  + + +  LL+ +C  G       L       CGL    D V
Sbjct: 412 EVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMNCGL----DAV 467

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            Y+ ++   CK+G    A +L   MLD+G  PD  ++  L+        ++EA  V + +
Sbjct: 468 AYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQM 527

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
             +    +  V  +++      G+ +K + L      +   +D
Sbjct: 528 AASGFVPDVAVFDSLIKGYSAEGQINKILDLIHEMRAKNVAID 570



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/374 (22%), Positives = 176/374 (47%), Gaps = 10/374 (2%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           +GR++ V  +  E++R+G       F  F+    +    G  ++  D M + G  PN   
Sbjct: 198 SGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVT 257

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N++++ L K G V   + +  E       P+ +++N  +  L  + ++     ++  M+
Sbjct: 258 YNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMI 317

Query: 213 RKG--FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           +      P+V  F  +++  CK+GR+ +A  +  +M   G   ++  +  LI GF R+ +
Sbjct: 318 QGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHK 377

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           ++MA  L  +++ +G  P+  TY+ LI GF +      A  FL  +   G   +L  +  
Sbjct: 378 VNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIP 437

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA 390
           L+  L ++G  + A+ +++  +++    D+  + +++   C SG      +L+  +  E 
Sbjct: 438 LLAALCQLGMMEQAMVLFNE-MDMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEG 496

Query: 391 ---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
              D V Y+ L++ F K G   +A ++   M   GF PD   F  L++G     +I++ +
Sbjct: 497 LAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKIL 556

Query: 448 NVYQGIVMNNPAVN 461
           ++   +   N A++
Sbjct: 557 DLIHEMRAKNVAID 570



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 48/215 (22%), Positives = 95/215 (44%), Gaps = 4/215 (1%)

Query: 391 DLVVYNALLSYFCKAGFP-NQAVKLYNTMLDKGFT---PDNYSFVGLLRGLCGARKIDEA 446
           D V YN +L+  C+ G    QA+ L   M  +      P+  S+  ++RGLC +R+ DEA
Sbjct: 75  DAVSYNIVLAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEA 134

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
           + + + +  +    +   +  ++  L +A     A++L           +V+ Y+  +RG
Sbjct: 135 VALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRG 194

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
               GR ++   ++ +M  + V P+   +   +   CK+  I    ++   ++   +E +
Sbjct: 195 YCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPN 254

Query: 567 YHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
             T   L   + K  S   A+    EM + G+ PD
Sbjct: 255 VVTYNVLINCLCKEGSVREALALRNEMDDKGVAPD 289



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/264 (21%), Positives = 119/264 (45%), Gaps = 12/264 (4%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV +F+ +I  + ++ GR      +   +A  GC+    T+   +  + R     M +  
Sbjct: 326 DVVTFNSVIHGLCKI-GRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNL 384

Query: 142 FDEMGRFGFTPNTFARNIVMD---VLFKIGRVDLGIKVLKE----TQLPNFLSFNIALCN 194
             E+   G  P++F  +I+++    L+++ R ++ ++ + +     +L +++    ALC 
Sbjct: 385 MSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQ 444

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           L  +     + + + M    G   +   +  ++   CK G I  A QLL  M+  G +  
Sbjct: 445 LGMMEQAMVLFNEMDMNC--GL--DAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPD 500

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
              +++LI+ F +L  L+ A  + ++M  +G  P+V  + SLIKG+      +     + 
Sbjct: 501 AVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLIH 560

Query: 315 MLESEGHAPDLVFHNVLIDCLSKM 338
            + ++  A D  F   L+    +M
Sbjct: 561 EMRAKNVAIDPKFICTLVRLPQQM 584



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 48/227 (21%), Positives = 97/227 (42%), Gaps = 5/227 (2%)

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE----TQLPNFLSFNIALCNLCKLND 200
           M   G   N    N ++    ++ +V++ + ++ E       P+  +++I +    KL +
Sbjct: 353 MAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWE 412

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
           V   +  +  M ++G    +  +  LL   C++G + +A  L   M  +   L   A++ 
Sbjct: 413 VDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEM-DMNCGLDAVAYST 471

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           ++ G  +   +  A  L + M+  G +P+ VTY+ LI  F +      A   L  + + G
Sbjct: 472 MMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASG 531

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
             PD+   + LI   S  G  +  LD+   +    +  D    C+L+
Sbjct: 532 FVPDVAVFDSLIKGYSAEGQINKILDLIHEMRAKNVAIDPKFICTLV 578


>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 575

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 107/455 (23%), Positives = 204/455 (44%), Gaps = 10/455 (2%)

Query: 118 KAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL 177
           K++ + + +  Y + +     +  F+EM   GF P +   N ++  +      +      
Sbjct: 93  KSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFF 152

Query: 178 KETQLPNFL---SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
            E+++   L   SF I +   C+  ++    D++  +   GF PNV ++  L++  CK G
Sbjct: 153 NESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKG 212

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWT--VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVT 292
            I +A  L   M   G  L  N WT  VLI G  +         ++EKM ++G  PN+ T
Sbjct: 213 EIEKAKDLFFEMGKFG--LVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYT 270

Query: 293 YTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
           Y  ++    +      AF   D +   G + ++V +N LI  L +    ++A  V D + 
Sbjct: 271 YNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMK 330

Query: 353 ELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPN 409
              + P+  T+ +L+   C  G+      L   L+   +   LV YN L+S FC+ G  +
Sbjct: 331 SYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTS 390

Query: 410 QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
            A K+   M ++G  P   ++  L+     +  ++ AI +   +       + H ++ ++
Sbjct: 391 GAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLI 450

Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
                 G+ ++A +LF+  + +    + V Y   I G  + G +  A  L+  M+   + 
Sbjct: 451 HGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELA 510

Query: 530 PNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
           PN  +Y  ++   CKER +K  + L++ +ID+ I+
Sbjct: 511 PNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGID 545



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 87/361 (24%), Positives = 158/361 (43%), Gaps = 36/361 (9%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G  E  + +  E+ + G V    T+ + +   ++  +     E +++M   G  PN +  
Sbjct: 212 GEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTY 271

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQLP----NFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N VM+ L K GR     KV  E +      N +++N  +  LC+    +    V+  M  
Sbjct: 272 NCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKS 331

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
               PN+  +  L++ FC +G++ +A  L   + + G S S+  + VL+ GF R      
Sbjct: 332 YVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSG 391

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  + ++M + G  P+ VTYT LI  F  +     A      +E  G  PD+  ++VLI 
Sbjct: 392 AAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIH 451

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLV 393
                G  ++A  ++  ++E  L P+                                 V
Sbjct: 452 GFCIKGQMNEASRLFKSMVEKMLEPNE--------------------------------V 479

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
           +YN ++  +CK G   +A++L+  M +K   P+  S+  L+R LC  RK+ EA ++ + +
Sbjct: 480 IYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKM 539

Query: 454 V 454
           +
Sbjct: 540 I 540



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/403 (23%), Positives = 177/403 (43%), Gaps = 39/403 (9%)

Query: 136 GMVLEAFD---EMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSF 188
           G + ++FD   E+  FGF+PN      ++D   K G +    DL  ++ K   + N  ++
Sbjct: 177 GEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTY 236

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
            + +  L K        ++   M   G +PN+  +  ++N  CK GR  +A+++   M  
Sbjct: 237 TVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRE 296

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
            G S ++  +  LI G  R  + + A  + ++M     +PN++TY +LI GF        
Sbjct: 297 RGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGK 356

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A S    L+S G +P LV +NVL+    + G    A  +   + E  + P          
Sbjct: 357 ALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSK-------- 408

Query: 369 TVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
                                   V Y  L+  F ++     A++L ++M + G  PD +
Sbjct: 409 ------------------------VTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVH 444

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
           ++  L+ G C   +++EA  +++ +V      N  ++  ++    + G  ++A++LFR  
Sbjct: 445 TYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDM 504

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
             ++   +V SY+  IR L +  + +EA  L  +M    + P+
Sbjct: 505 EEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPS 547



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 115/234 (49%), Gaps = 7/234 (2%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNL 195
           +  D+M  +   PN    N ++D    +G++   + + ++ +     P+ +++N+ +   
Sbjct: 324 KVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGF 383

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
           C+  D S    ++  M  +G  P+   + IL++ F +   +  A QL   M  LG    V
Sbjct: 384 CRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDV 443

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF-MEAKMFSIAFSFLD 314
           + ++VLI GF    +++ A  L++ MV+    PN V Y ++I G+  E   +     F D
Sbjct: 444 HTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRD 503

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           M E E  AP++  ++ LI  L K     +A D+ + +++  + P S T C+L+S
Sbjct: 504 MEEKE-LAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDP-SDTICNLIS 555



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 51/268 (19%), Positives = 124/268 (46%), Gaps = 8/268 (2%)

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           +I G ++++ F+ +     + ESE        + V+I+   +  S D ++  ++ +++  
Sbjct: 65  VISGKIQSQFFTSSSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKG 124

Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKLVC-----GLEVEADLVVYNALLSYFCKAGFPNQ 410
            VP S  F +LL+ V  S  F+   +  C      ++V  D+  +  ++   C+AG   +
Sbjct: 125 FVPGSNCFNNLLTFVVGSSSFN---QWWCFFNESKIKVVLDVYSFGIVIKGCCEAGEIEK 181

Query: 411 AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
           +  L   + + GF+P+   +  L+ G C   +I++A +++  +       N   +T ++ 
Sbjct: 182 SFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIH 241

Query: 471 RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
            L + G   +  +++ +        ++ +Y   +  L + GRT++A+ ++ +M+   V  
Sbjct: 242 GLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSC 301

Query: 531 NAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           N  TY  ++   C+E       +++  +
Sbjct: 302 NIVTYNTLIGGLCREMKANEANKVMDQM 329


>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
          Length = 933

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 109/464 (23%), Positives = 201/464 (43%), Gaps = 39/464 (8%)

Query: 182 LP-NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAY 240
           LP + + +N  +   C+   V   + V+ MM   G  PNV  +   +  +C+   + EA+
Sbjct: 200 LPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAF 259

Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
            L   M+  G  L V   + L+ G  R  R   A  L+ +M + G  PN VTY +LI   
Sbjct: 260 DLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSL 319

Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
            +A       S L  + S G   DLV +  L+D L K G  D+  D     L   L  + 
Sbjct: 320 AKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNG 379

Query: 361 YTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
            T+  L+  +C +       +++  +E   +  ++V ++++++ F K G  ++A +    
Sbjct: 380 VTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRM 439

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           M ++G  P+  ++  L+ G    +  D A+ VY  ++     VN  +  ++V+ L + G+
Sbjct: 440 MKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGK 499

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG--------------------------- 510
             +A+ LF+ A      LD V+YT  I GL +                            
Sbjct: 500 IEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNV 559

Query: 511 --------GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
                   G+ +EA  + ++M+++ + P+  TY  M++S C++       +LL ++  + 
Sbjct: 560 FINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSS 619

Query: 563 IELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRK 606
           I+ +  T   L   +F   +   A   L EM + G  P  +  +
Sbjct: 620 IKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHR 663



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 116/527 (22%), Positives = 230/527 (43%), Gaps = 8/527 (1%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV  ++ +++   R  G+ +  RG++  +   G      T+  F+  Y R +      + 
Sbjct: 203 DVVGYNTLVAGFCR-AGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDL 261

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           ++ M R G   +    + ++  L + GR      + +E      +PN +++   + +L K
Sbjct: 262 YEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAK 321

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
                 +  ++G MV +G   ++  +  L++   K G+  E    L   ++   SL+   
Sbjct: 322 AGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVT 381

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +TVLID   +   +D A  +  +M +   SPNVVT++S+I GF++  +   A  +  M++
Sbjct: 382 YTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMK 441

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G  P++V +  LID   K    D AL+VY  +L   +  + +   SL++ +  +G+  
Sbjct: 442 ERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIE 501

Query: 378 ---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
               L K   G  +  D V Y  L+    KAG    A K    ++D+   PD   +   +
Sbjct: 502 EAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFI 561

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
             LC   K  EA ++   +       +   +  ++      G   KA++L     +    
Sbjct: 562 NCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIK 621

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
            ++++Y   + GL   G  E+A  L ++M      P++ T+R +L +  + R + ++  +
Sbjct: 622 PNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDI 681

Query: 555 LQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            + +++A +  D      L + +     +  A   L EM   G+ PD
Sbjct: 682 HEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPD 728



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 119/555 (21%), Positives = 223/555 (40%), Gaps = 78/555 (14%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV +   +++ + R  GRF     +  E+ +VG V    T+   +    +      +L  
Sbjct: 273 DVVTLSALVAGLCR-DGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSL 331

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCK 197
             EM   G   +      +MD L K G+ D     L+    +    N +++ + +  LCK
Sbjct: 332 LGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCK 391

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            ++V   + V+  M  K   PNV  F  ++N F K G + +A +   +M   G + +V  
Sbjct: 392 AHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVT 451

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMV-------------------QNG------------- 285
           +  LIDGF + +  D A  ++  M+                   QNG             
Sbjct: 452 YGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDAS 511

Query: 286 ---CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
               S + V YT+LI G  +A     AF F   L      PD V +NV I+CL  +G + 
Sbjct: 512 GSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFK 571

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALL 399
           +A  +   +  + L PD  T+ +++ + C  G  +   KL+  ++   ++ +L+ YN L+
Sbjct: 572 EAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLV 631

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
           +     G   +A  L N M+  GF+P + +   +L+    +R++D  +++++ ++     
Sbjct: 632 AGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLH 691

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            +  V+  ++  L   G   KA  +    +      D +++   I G  +    + A+  
Sbjct: 692 ADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFAT 751

Query: 520 YSQMKH-----------------------------------IAVPPNAYTYRVMLLSFCK 544
           Y+QM H                                     + PN  TY +++    K
Sbjct: 752 YAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGK 811

Query: 545 ERNIKMVKRLLQDVI 559
           + N     RL  +++
Sbjct: 812 QSNKVEAMRLYCEMV 826



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/396 (23%), Positives = 180/396 (45%), Gaps = 8/396 (2%)

Query: 174 IKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKM 233
           I +L+ ++ P  +++NI L     L+D ++   V+  M ++G   +      LL   C+ 
Sbjct: 93  IALLRSSR-PTTVAYNILLA---ALSDHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRN 148

Query: 234 GRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTY 293
           G++  A  L      +  +L V  W  LI G+ R+     A  + ++M   G   +VV Y
Sbjct: 149 GQVDAAAALADRGGGI-HALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGY 207

Query: 294 TSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE 353
            +L+ GF  A     A   LDM++  G  P++  +   I    +    ++A D+Y+G++ 
Sbjct: 208 NTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVR 267

Query: 354 LKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQ 410
             ++ D  T  +L++ +C  GRFS    L   ++      + V Y  L+    KAG   +
Sbjct: 268 NGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKE 327

Query: 411 AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
            + L   M+ +G   D  ++  L+  L    K DE  +  +  + +N ++N   +T ++D
Sbjct: 328 LLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLID 387

Query: 471 RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
            L +A    +A Q+      +    +VV+++  I G ++ G  ++A      MK   + P
Sbjct: 388 ALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINP 447

Query: 531 NAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           N  TY  ++  F K +       +  D++   +E++
Sbjct: 448 NVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVN 483



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 92/430 (21%), Positives = 177/430 (41%), Gaps = 39/430 (9%)

Query: 136 GMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSF 188
           G + EA   F +    G + +      ++D LFK G +      G +++    LP+ + +
Sbjct: 498 GKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVY 557

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           N+ +  LC L      K ++  M   G  P+   +  ++   C+ G  A+A +LL  M  
Sbjct: 558 NVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKM 617

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
                ++  +  L+ G      ++ A YL  +MV  G SP+ +T+  +++   +++   +
Sbjct: 618 SSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDV 677

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
                + + + G   D+  +N L+  L   G    A  V + +L   + PD+ TF     
Sbjct: 678 ILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITF----- 732

Query: 369 TVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
                                      NAL+   CK+   + A   Y  ML +  +P+  
Sbjct: 733 ---------------------------NALILGHCKSSHLDNAFATYAQMLHQNISPNIA 765

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
           +F  LL GL    +I EA  V   +  +    N   +  +V    +     +A++L+   
Sbjct: 766 TFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEM 825

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
           + + +   V +Y   I    + G   +A  L+  M+   V P + TY +++  + + RN 
Sbjct: 826 VGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNG 885

Query: 549 KMVKRLLQDV 558
             VK+ L+D+
Sbjct: 886 TEVKKCLKDM 895



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 96/251 (38%), Gaps = 18/251 (7%)

Query: 359 DSYTFCSLLSTVCLSGRFSLL-PKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
           D  +  +LL + C   R  LL P +          V YN LL+          A  +   
Sbjct: 72  DPASLNALLYSHC---RLRLLRPAIALLRSSRPTTVAYNILLAALSDHA---HAPAVLAE 125

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           M  +G   D  +   LL GLC   ++D A        + +     H    I    + AG 
Sbjct: 126 MCKRGVPFDGVTVNTLLAGLCRNGQVDAAA------ALADRGGGIHALDVIGWNTLIAGY 179

Query: 478 CH-----KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
           C       A+ +  R   +  P+DVV Y   + G    G+ + A  +   MK   V PN 
Sbjct: 180 CRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNV 239

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVE 592
            TY   ++ +C+ + ++    L + ++   + LD  T   L   + +    S A     E
Sbjct: 240 ATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFRE 299

Query: 593 MCNLGLIPDEM 603
           M  +G +P+ +
Sbjct: 300 MDKVGAVPNHV 310


>gi|356561399|ref|XP_003548969.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12300, mitochondrial-like [Glycine max]
          Length = 422

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 106/397 (26%), Positives = 192/397 (48%), Gaps = 14/397 (3%)

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFY 217
           N+V D + +  R+ L    ++ T  P  + FN  L +  K+        +   M  KG  
Sbjct: 33  NVVDDAVSQFNRMLL----MRHT--PPIIKFNKILGSPVKMKYYPAAISLSKQMEVKGIE 86

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
           PN+    IL+NCFC +G +A ++ +LG ++ LG   +    T LI G      +  + + 
Sbjct: 87  PNLVTLNILINCFCHLGHMAFSFSVLGKILKLGYQPNTLTLTTLIKGLCLKDEVRKSLHF 146

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
            +K+V  G   N V+  +L+ G  +      A   L ++E      ++V +N +ID L K
Sbjct: 147 HDKLVAQGFQINHVSCGTLLNGLCKIGEMRGAMKLLRVIEDRSTITNVVMYNTIIDGLCK 206

Query: 338 MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADLV 393
               ++A D+Y  +      P+  T+ +L+   CL+G+    F LL +++    ++ D+ 
Sbjct: 207 DKLVNEAYDLYSEMDVRGNFPNVITYHTLICGFCLAGQLMEAFGLLKEMILK-NIDPDVY 265

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            YN L+   CK G  + A+ L + +  +    D  ++  LL G C    +D+AI +++ +
Sbjct: 266 TYNILMDALCKEG-KSYALDLIDEIHRRRQPADVVTYTSLLDGXCKNXYLDKAIALFKKM 324

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
                  N + H+ +    ++ GR   A + F+  +V+ Y +DV +YTV I GL + G  
Sbjct: 325 KERRIQPNVYTHSXLTG-CVKGGRLKNAQEFFQHLLVKGYCIDVWTYTVMISGLCKEGML 383

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLS-FCKERNIK 549
           +EA  +  +M+     PNA T+ +++ S F K+ N K
Sbjct: 384 DEALAMKXKMEDNGCIPNAVTFEIIICSLFEKDENDK 420



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 160/358 (44%), Gaps = 15/358 (4%)

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNI 190
           Y   +    +M   G  PN    NI+++    +G +        K+LK    PN L+   
Sbjct: 70  YPAAISLSKQMEVKGIEPNLVTLNILINCFCHLGHMAFSFSVLGKILKLGYQPNTLTLTT 129

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +  LC  ++V         +V +GF  N      LLN  CK+G +  A +LL ++    
Sbjct: 130 LIKGLCLKDEVRKSLHFHDKLVAQGFQINHVSCGTLLNGLCKIGEMRGAMKLLRVIEDRS 189

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
           T  +V  +  +IDG  + + ++ A  L+ +M   G  PNV+TY +LI GF  A     AF
Sbjct: 190 TITNVVMYNTIIDGLCKDKLVNEAYDLYSEMDVRGNFPNVITYHTLICGFCLAGQLMEAF 249

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMG-SYDDALDVYDGLLELKLVPDSYTFCSLLST 369
             L  +  +   PD+  +N+L+D L K G SY  ALD+ D +   +   D  T+ SLL  
Sbjct: 250 GLLKEMILKNIDPDVYTYNILMDALCKEGKSY--ALDLIDEIHRRRQPADVVTYTSLLDG 307

Query: 370 VC----LSGRFSLLPKLVCGLEVEADLVVY-NALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
            C    L    +L  K+    E      VY ++ L+   K G    A + +  +L KG+ 
Sbjct: 308 XCKNXYLDKAIALFKKMK---ERRIQPNVYTHSXLTGCVKGGRLKNAQEFFQHLLVKGYC 364

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI 482
            D +++  ++ GLC    +DEA+ +   +  N    NA     I+  L E     KA+
Sbjct: 365 IDVWTYTVMISGLCKEGMLDEALAMKXKMEDNGCIPNAVTFEIIICSLFEKDENDKAL 422



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/293 (22%), Positives = 132/293 (45%), Gaps = 8/293 (2%)

Query: 287 SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALD 346
           +P ++ +  ++   ++ K +  A S    +E +G  P+LV  N+LI+C   +G    +  
Sbjct: 51  TPPIIKFNKILGSPVKMKYYPAAISLSKQMEVKGIEPNLVTLNILINCFCHLGHMAFSFS 110

Query: 347 VYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVC-GLEVEADLVVYNALLSY 401
           V   +L+L   P++ T  +L+  +CL            KLV  G ++    V    LL+ 
Sbjct: 111 VLGKILKLGYQPNTLTLTTLIKGLCLKDEVRKSLHFHDKLVAQGFQINH--VSCGTLLNG 168

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVN 461
            CK G    A+KL   + D+    +   +  ++ GLC  + ++EA ++Y  + +     N
Sbjct: 169 LCKIGEMRGAMKLLRVIEDRSTITNVVMYNTIIDGLCKDKLVNEAYDLYSEMDVRGNFPN 228

Query: 462 AHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYS 521
              +  ++     AG+  +A  L +  I++    DV +Y + +  L + G++  A  L  
Sbjct: 229 VITYHTLICGFCLAGQLMEAFGLLKEMILKNIDPDVYTYNILMDALCKEGKSY-ALDLID 287

Query: 522 QMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLT 574
           ++     P +  TY  +L   CK   +     L + + + RI+ + +T   LT
Sbjct: 288 EIHRRRQPADVVTYTSLLDGXCKNXYLDKAIALFKKMKERRIQPNVYTHSXLT 340



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 57/231 (24%), Positives = 104/231 (45%), Gaps = 3/231 (1%)

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV---EADLVVYNAL 398
           DDA+  ++ +L ++  P    F  +L +      +     L   +EV   E +LV  N L
Sbjct: 36  DDAVSQFNRMLLMRHTPPIIKFNKILGSPVKMKYYPAAISLSKQMEVKGIEPNLVTLNIL 95

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           ++ FC  G    +  +   +L  G+ P+  +   L++GLC   ++ ++++ +  +V    
Sbjct: 96  INCFCHLGHMAFSFSVLGKILKLGYQPNTLTLTTLIKGLCLKDEVRKSLHFHDKLVAQGF 155

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
            +N      +++ L + G    A++L R         +VV Y   I GL +     EAY 
Sbjct: 156 QINHVSCGTLLNGLCKIGEMRGAMKLLRVIEDRSTITNVVMYNTIIDGLCKDKLVNEAYD 215

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
           LYS+M      PN  TY  ++  FC    +     LL+++I   I+ D +T
Sbjct: 216 LYSEMDVRGNFPNVITYHTLICGFCLAGQLMEAFGLLKEMILKNIDPDVYT 266


>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
 gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
          Length = 420

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 161/313 (51%), Gaps = 5/313 (1%)

Query: 177 LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
           L  +Q  + +S++  +  LCK   ++   ++   M  KG  P+   + IL+N  CK  ++
Sbjct: 83  LLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQL 142

Query: 237 AEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSL 296
                L+  M   G S +V  +T LI GF    R+D A  + ++M   G +PN VTYT+L
Sbjct: 143 EMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTAL 202

Query: 297 IKGFMEAKMFSIAFSFLDMLESEGHA--PDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
           I+G  +      A   L  ++  G+   P++V +  LI  L + G ++  ++  D ++  
Sbjct: 203 IQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIIS 262

Query: 355 KLVPDSYTFCSLLSTVCLSGRF---SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQA 411
              P++ T+ +L+  +C  G F   ++L   +  +  E D+V+YN+L+   CK G  + A
Sbjct: 263 GCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFA 322

Query: 412 VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
            ++   M++KG  PD +++  L++GLC A  +DEA+ + Q +       N+  +T +++ 
Sbjct: 323 REMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLING 382

Query: 472 LIEAGRCHKAIQL 484
             +A R   A+QL
Sbjct: 383 FTQADRTDHALQL 395



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 140/297 (47%), Gaps = 9/297 (3%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALC 193
            +E F EM   G  P++F  NI+++ L K  ++++G+ ++ E Q     P  +++   + 
Sbjct: 110 AMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIH 169

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
             C    V    D++  M  +G  PN   +  L+   C  G +  A  +L  M   G   
Sbjct: 170 GFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNEC 229

Query: 254 SVN--AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
             N   +T LI G  +    +M     ++M+ +GC PN  TYT+LI G  +   F  A  
Sbjct: 230 CPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAV 289

Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
            L+ + + G   D+V +N LID L KMG  D A ++   ++E  + PD +T+ SL+  +C
Sbjct: 290 LLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLC 349

Query: 372 LSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
            +G       L+  +  +    + V Y  L++ F +A   + A++L N M   G  P
Sbjct: 350 DAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMP 406



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 144/318 (45%), Gaps = 30/318 (9%)

Query: 227 LNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGC 286
           +N  CK G+IAEA ++   M   G++     + +LI+G  +  +L+M   L ++M   G 
Sbjct: 98  INGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGF 157

Query: 287 SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALD 346
           SP VVTYT+LI GF  A     A   LD +E  G  P+ V +  LI  L   G  + A+ 
Sbjct: 158 SPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAIL 217

Query: 347 VYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAG 406
           V   L E+KL                            G E   ++V Y  L+   C+ G
Sbjct: 218 V---LKEMKLR---------------------------GNECCPNVVTYTQLIHGLCQKG 247

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
                ++  + M+  G  P+N ++  L+ GLC      EA  +   +V     ++  ++ 
Sbjct: 248 LFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYN 307

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
           +++D L + G    A ++    + +    DV +YT  I+GL + G  +EA  L  +M+  
Sbjct: 308 SLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAK 367

Query: 527 AVPPNAYTYRVMLLSFCK 544
            + PN+ TY  ++  F +
Sbjct: 368 GIVPNSVTYTTLINGFTQ 385



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 78/318 (24%), Positives = 132/318 (41%), Gaps = 42/318 (13%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV S+   I+ + +  G+      I  E+   G    + T+ + +    +     M +  
Sbjct: 90  DVISYSRKINGLCK-KGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSL 148

Query: 142 FDEMGRFGF-----------------------------------TPNTFARNIVMDVLFK 166
            DEM   GF                                   TPNT     ++  L  
Sbjct: 149 MDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCD 208

Query: 167 IGRVDLGIKVLKETQL------PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV 220
            G V+  I VLKE +L      PN +++   +  LC+        + +  M+  G +PN 
Sbjct: 209 CGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNN 268

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
             +  L++  C+ G   EA  LL  M+ +G  L V  +  LIDG  ++  LD A  +   
Sbjct: 269 ATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQIL 328

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           MV+ G +P+V TYTSLI+G  +A +   A   +  + ++G  P+ V +  LI+  ++   
Sbjct: 329 MVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADR 388

Query: 341 YDDALDVYDGLLELKLVP 358
            D AL + + +    L+P
Sbjct: 389 TDHALQLVNEMKSNGLMP 406



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 99/239 (41%), Gaps = 41/239 (17%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL------PNFLSFNIA 191
            ++  DEM   G TPNT     ++  L   G V+  I VLKE +L      PN +++   
Sbjct: 180 AMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQL 239

Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
           +  LC+        + +  M+  G +PN   +  L++  C+ G   EA  LL  M+ +G 
Sbjct: 240 IHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGC 299

Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNV--------------------- 290
            L V  +  LIDG  ++  LD A  +   MV+ G +P+V                     
Sbjct: 300 ELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALG 359

Query: 291 --------------VTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
                         VTYT+LI GF +A     A   ++ ++S G  P    + +L   L
Sbjct: 360 LMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKILFKSL 418



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 113/281 (40%), Gaps = 36/281 (12%)

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV 383
           D++ ++  I+ L K G   +A++++  + E    PDS+T                     
Sbjct: 90  DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFT--------------------- 128

Query: 384 CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
                      YN L++  CK       V L + M  +GF+P   ++  L+ G C A ++
Sbjct: 129 -----------YNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRV 177

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV---EKYPLDVVSY 500
           D A+++   +       N   +TA++  L + G   +AI + +   +   E  P +VV+Y
Sbjct: 178 DAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCP-NVVTY 236

Query: 501 TVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
           T  I GL + G  E       +M      PN  TY  ++   C++ +      LL +++ 
Sbjct: 237 TQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVA 296

Query: 561 ARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
              ELD      L   + K      A    + M   G+ PD
Sbjct: 297 IGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPD 337



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/155 (22%), Positives = 70/155 (45%), Gaps = 5/155 (3%)

Query: 404 KAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAH 463
           + G P+ ++++Y   L      D  S+   + GLC   +I EA+ +++ +     A ++ 
Sbjct: 69  RRGIPS-SLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSF 127

Query: 464 VHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM 523
            +  +++ L +  +    + L        +   VV+YT  I G    GR + A  +  +M
Sbjct: 128 TYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEM 187

Query: 524 KHIAVPPNAYTYRVMLLSFCK----ERNIKMVKRL 554
           +H  + PN  TY  ++   C     ER I ++K +
Sbjct: 188 EHRGITPNTVTYTALIQGLCDCGEVERAILVLKEM 222



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 74/150 (49%), Gaps = 18/150 (12%)

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
           +++++R  ++     DV+SY+  I GL + G+  EA  ++ +M+     P+++TY +++ 
Sbjct: 75  SLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILIN 134

Query: 541 SFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSS---SAVNQLVEMCNLG 597
             CK+  ++M   L+ D + AR      T +  T  I  F ++    +A++ L EM + G
Sbjct: 135 GLCKDAQLEMGVSLM-DEMQARGF--SPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRG 191

Query: 598 LIPDEMWRKLGLLSDETMTPVSLFDGFVPC 627
           + P+            T+T  +L  G   C
Sbjct: 192 ITPN------------TVTYTALIQGLCDC 209



 Score = 43.9 bits (102), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 23/118 (19%), Positives = 54/118 (45%)

Query: 441 RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSY 500
           R I  ++ +Y+  ++N+   +   ++  ++ L + G+  +A+++FR    +    D  +Y
Sbjct: 70  RGIPSSLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTY 129

Query: 501 TVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
            + I GL +  + E    L  +M+     P   TY  ++  FC    +     +L ++
Sbjct: 130 NILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEM 187


>gi|297817780|ref|XP_002876773.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322611|gb|EFH53032.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 559

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 122/523 (23%), Positives = 234/523 (44%), Gaps = 18/523 (3%)

Query: 45  PIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVR 104
           P+    HI    L+N     ++L F  +    R Y     SF+ ++S V +L G+ +   
Sbjct: 21  PVTCNKHI--HQLINSNCGALSLKFLAYLV-SRGYAPHRSSFNSVVSFVCKL-GQVKFAV 76

Query: 105 GIVGELARVGCVIKAQTFLLFLRIYWR-GEMYGMVLEAFDEMGRFGFT--PNTFARNIVM 161
            IV  + R GC     ++   +  + R G++    L        +GFT  P+  + N + 
Sbjct: 77  DIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSACLVLESLRASYGFTCKPDIVSFNTLF 136

Query: 162 DVLFKIGRVD---LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYP 218
           +   K+  +D   + + V+ +   PN ++++  +   CK  ++         M R   +P
Sbjct: 137 NGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDMFCKSGELKLALKSFNCMKRDALFP 196

Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
           NV  F  L++ +CK G +     L   M  +  SL+V  +T LIDGF +   +  AG ++
Sbjct: 197 NVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYTALIDGFCKKGEMQRAGGMY 256

Query: 279 EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
            +M+++   PN + YT++I GF +      A  FL  + ++G   D+  + V+I  L  +
Sbjct: 257 LRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGI 316

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVY 395
           G   +A ++ + + +  LVPD   F ++++    SGR      +   L     E D+V  
Sbjct: 317 GKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVAL 376

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
           + ++    K G  ++A+  + T        ++  +  L+  LC      E   ++  I  
Sbjct: 377 STMIDGIAKNGQLHEAISYFCTE-----KANDVMYTVLIDALCKEEDFIEVERLFSKISE 431

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
                +  ++T+ +  L + G    A +L  + + E   LD+ +YT  I GL   G   E
Sbjct: 432 AGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTKMVQEGLELDLFAYTTLIYGLTSKGLMVE 491

Query: 516 AYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           A  ++ +M    V P++  + +++ ++ KE N+     LL D+
Sbjct: 492 ARQVFDEMLRSGVCPDSAVFDLLIRAYEKEGNMTTASDLLLDM 534



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 103/458 (22%), Positives = 201/458 (43%), Gaps = 43/458 (9%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+  SFN  +  +CKL  V    D++  M R G  P+V  +  L++  C+ G I  A  +
Sbjct: 54  PHRSSFNSVVSFVCKLGQVKFAVDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSACLV 113

Query: 243 L-GLMITLGTSLSVN--AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG 299
           L  L  + G +   +  ++  L +GF +++ LD   +++  ++   CSPNVVTY++ I  
Sbjct: 114 LESLRASYGFTCKPDIVSFNTLFNGFSKMKMLDEV-FVYMGVMLKCCSPNVVTYSTWIDM 172

Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
           F ++    +A    + ++ +   P++V    LID   K G  +  + +Y+ +  +++  +
Sbjct: 173 FCKSGELKLALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLN 232

Query: 360 SYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYN 416
             T+ +L+   C  G       +   +    VE + +VY  +++ F + G  + A+K   
Sbjct: 233 VVTYTALIDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLA 292

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
            ML++G   D  ++  ++ GLCG  K+ EA  + + +   +   +  + T +++   ++G
Sbjct: 293 KMLNQGMRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKSG 352

Query: 477 RCHKAIQLFRRAIVEKYPLDVVS------------------------------YTVAIRG 506
           R   A+ ++ + I   +  DVV+                              YTV I  
Sbjct: 353 RMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAISYFCTEKANDVMYTVLIDA 412

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           L +     E   L+S++    + P+ + Y   +   CK+ N+    +L   ++   +ELD
Sbjct: 413 LCKEEDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTKMVQEGLELD 472

Query: 567 YHTSIRLTKFIFKFHSSS---SAVNQLVEMCNLGLIPD 601
                  T  I+   S      A     EM   G+ PD
Sbjct: 473 LFA---YTTLIYGLTSKGLMVEARQVFDEMLRSGVCPD 507



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/428 (21%), Positives = 190/428 (44%), Gaps = 47/428 (10%)

Query: 175 KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
           ++ K + LP+ ++ N  +  L   N  +     +  +V +G+ P+   F  +++  CK+G
Sbjct: 11  RLRKSSNLPDPVTCNKHIHQLINSNCGALSLKFLAYLVSRGYAPHRSSFNSVVSFVCKLG 70

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLID------------------------------- 263
           ++  A  ++  M   G    V ++  LID                               
Sbjct: 71  QVKFAVDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSACLVLESLRASYGFTCKPDIV 130

Query: 264 -------GFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
                  GF +++ LD   +++  ++   CSPNVVTY++ I  F ++    +A    + +
Sbjct: 131 SFNTLFNGFSKMKMLDEV-FVYMGVMLKCCSPNVVTYSTWIDMFCKSGELKLALKSFNCM 189

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
           + +   P++V    LID   K G  +  + +Y+ +  +++  +  T+ +L+   C  G  
Sbjct: 190 KRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYTALIDGFCKKGEM 249

Query: 377 SLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
                +   +    VE + +VY  +++ F + G  + A+K    ML++G   D  ++  +
Sbjct: 250 QRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVI 309

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           + GLCG  K+ EA  + + +   +   +  + T +++   ++GR   A+ ++ + I   +
Sbjct: 310 ISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAAVNMYHKLIERGF 369

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
             DVV+ +  I G+ + G+  EA   +   K      N   Y V++ + CKE +   V+R
Sbjct: 370 EPDVVALSTMIDGIAKNGQLHEAISYFCTEK-----ANDVMYTVLIDALCKEEDFIEVER 424

Query: 554 LLQDVIDA 561
           L   + +A
Sbjct: 425 LFSKISEA 432



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/368 (20%), Positives = 154/368 (41%), Gaps = 36/368 (9%)

Query: 237 AEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSL 296
           A + + L  +++ G +   +++  ++    +L ++  A  +   M + GC P+V++Y SL
Sbjct: 38  ALSLKFLAYLVSRGYAPHRSSFNSVVSFVCKLGQVKFAVDIVHSMPRFGCEPDVISYNSL 97

Query: 297 IKGFMEAKMFSIAFSFLDMLESE---GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE 353
           I G         A   L+ L +       PD+V  N L +  SKM   D+   VY G++ 
Sbjct: 98  IDGHCRNGDIRSACLVLESLRASYGFTCKPDIVSFNTLFNGFSKMKMLDEVF-VYMGVM- 155

Query: 354 LKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVK 413
                                       L C      ++V Y+  +  FCK+G    A+K
Sbjct: 156 ----------------------------LKC---CSPNVVTYSTWIDMFCKSGELKLALK 184

Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
            +N M      P+  +F  L+ G C A  ++  +++Y+ +     ++N   +TA++D   
Sbjct: 185 SFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYTALIDGFC 244

Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
           + G   +A  ++ R + ++   + + YT  I G  + G ++ A    ++M +  +  +  
Sbjct: 245 KKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQGMRLDIT 304

Query: 534 TYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEM 593
            Y V++   C    +K    +++D+    +  D      +    FK     +AVN   ++
Sbjct: 305 AYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAAVNMYHKL 364

Query: 594 CNLGLIPD 601
              G  PD
Sbjct: 365 IERGFEPD 372


>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
 gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
          Length = 607

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 107/454 (23%), Positives = 199/454 (43%), Gaps = 14/454 (3%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV +F+ ++S + R  G    +  +   +          T+ + L    +  + G  L+ 
Sbjct: 130 DVSTFNSLLSALGR-AGNLRGMTELFTSMREASVKPDIVTYGILLNRLCKAGLVGDALKV 188

Query: 142 FDEMGRFG--FTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ------LPNFLSFNIALC 193
            D M   G     +    N V+D L KIGR+   I  + E         PN +++N    
Sbjct: 189 LDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQVHGCAPNTVTYNCLAD 248

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
             C++ D+     ++  M ++G  PNV     ++   C++GR+  A        T     
Sbjct: 249 ACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEA 308

Query: 254 SVNA--WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
             NA  ++ L+  F     + +A  L+ +M   G  P+ V Y ++I G  +A     A +
Sbjct: 309 RGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACN 368

Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
               ++  G   D   +N+LI    +     +A  +++ +    L PD YT+ +LLS +C
Sbjct: 369 IAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLC 428

Query: 372 LSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
            +G FS + +L+  +     +  +V +  L+  +CKAG  ++A+K++ +M +    P+  
Sbjct: 429 KAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTV 488

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
            +  L+  LC +R++D AI ++  +  NN   N   + A++  L +     KA +L  + 
Sbjct: 489 IYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQM 548

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQ 522
             E+   D V+  V +  L E G TE       Q
Sbjct: 549 KEERCTPDYVTMDVLMEWLPEIGETERLKCFMEQ 582



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 117/470 (24%), Positives = 202/470 (42%), Gaps = 25/470 (5%)

Query: 91  SVVTRLTGRFETVRGIVG----ELARVGCVIKAQTFLLFLRIYWR-GEMYGMVLEAFDEM 145
           S++++L  RF +           LA         TF   L    R G + GM  E F  M
Sbjct: 99  SLLSKLLARFSSPADAASFLRDSLAAGAPAPDVSTFNSLLSALGRAGNLRGMT-ELFTSM 157

Query: 146 GRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP------NFLSFNIALCNLCKLN 199
                 P+     I+++ L K G V   +KVL     P      + +  N  +  LCK+ 
Sbjct: 158 REASVKPDIVTYGILLNRLCKAGLVGDALKVLDRMSSPGSDVCADIVILNTVVDGLCKIG 217

Query: 200 DVSNVKDVIGMMVRK--GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            + +    +   +R+  G  PN   +  L +  C++G I  A Q++  M   G + +V  
Sbjct: 218 RLQDAIVFVDERMRQVHGCAPNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVIT 277

Query: 258 WTVLIDGFRRLRRLDMA-GYLWEK----MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
              ++ G  R+ R+  A  +  EK    +   G   N VTY++L+  F+     ++A   
Sbjct: 278 MNTIVGGLCRVGRVGAALDFFREKRTTWLEARG---NAVTYSTLVSAFLHCNNVALAMEL 334

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
              +  +G+ PD V +  +I  L++ G   DA ++   + +     D   +  L+   C 
Sbjct: 335 FHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCR 394

Query: 373 SGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
             R     +L   + G  ++ D+  YN LLS  CKAG  +   +L   M+D G  P   +
Sbjct: 395 KKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVT 454

Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
           F  L+ G C A K DEA+ +++ +       N  ++  ++D L ++     AI+LF    
Sbjct: 455 FGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMR 514

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
               P +V +Y   ++GL +    E+A+ L  QMK     P+  T  V++
Sbjct: 515 ENNVPANVTTYNALLKGLQDKNMPEKAFELMDQMKEERCTPDYVTMDVLM 564



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 94/428 (21%), Positives = 191/428 (44%), Gaps = 9/428 (2%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+  +FN  L  L +  ++  + ++   M      P++  + ILLN  CK G + +A ++
Sbjct: 129 PDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILLNRLCKAGLVGDALKV 188

Query: 243 LGLMITLGTSLSVNA--WTVLIDGFRRLRRL-DMAGYLWEKMVQ-NGCSPNVVTYTSLIK 298
           L  M + G+ +  +      ++DG  ++ RL D   ++ E+M Q +GC+PN VTY  L  
Sbjct: 189 LDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQVHGCAPNTVTYNCLAD 248

Query: 299 GFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVY--DGLLELKL 356
                    +A   ++ +E EG  P+++  N ++  L ++G    ALD +       L+ 
Sbjct: 249 ACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEA 308

Query: 357 VPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVK 413
             ++ T+ +L+S        +L  +L   +  +    D V+Y  ++S   +AG    A  
Sbjct: 309 RGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACN 368

Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
           +  +M   GF  D  ++  L+ G C  +++ EA  +++ +       + + +  ++  L 
Sbjct: 369 IAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLC 428

Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
           +AG      +L    I +     VV++   + G  + G+T+EA  ++  M    + PN  
Sbjct: 429 KAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTV 488

Query: 534 TYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEM 593
            Y  ++   CK R + +  +L  ++ +  +  +  T   L K +   +    A   + +M
Sbjct: 489 IYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQM 548

Query: 594 CNLGLIPD 601
                 PD
Sbjct: 549 KEERCTPD 556



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 75/337 (22%), Positives = 139/337 (41%), Gaps = 45/337 (13%)

Query: 309 AFSFL-DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
           A SFL D L +   APD+   N L+  L + G+     +++  + E  + PD  T+  LL
Sbjct: 114 AASFLRDSLAAGAPAPDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILL 173

Query: 368 STVCLSG----RFSLLPKLVC-GLEVEADLVVYNALLSYFCKAG---------------- 406
           + +C +G       +L ++   G +V AD+V+ N ++   CK G                
Sbjct: 174 NRLCKAGLVGDALKVLDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQV 233

Query: 407 ---FPNQ------------------AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
               PN                   A ++   M  +G TP+  +   ++ GLC   ++  
Sbjct: 234 HGCAPNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGA 293

Query: 446 AINVYQGIVMN--NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           A++ ++           NA  ++ +V   +       A++LF     + YP D V Y   
Sbjct: 294 ALDFFREKRTTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTM 353

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           I GL + GR  +A  + + MK      +   Y +++  FC+++ +    +L +++  A +
Sbjct: 354 ISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGL 413

Query: 564 ELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           + D +T   L   + K    S+    L  M + G  P
Sbjct: 414 QPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQP 450


>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
 gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 120/498 (24%), Positives = 210/498 (42%), Gaps = 18/498 (3%)

Query: 80  FHDVQSFDHMISVVTRLT------GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGE 133
             D+QS    I V + L       G FE    +  E+    C   ++  L  L    R  
Sbjct: 122 LEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSREMK---CSPDSKACLSILNGLVRRR 178

Query: 134 MYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE-TQL---PNFLSFN 189
            +  V   +  M   G  P+     ++    FK G      K+L E T L   PN   + 
Sbjct: 179 RFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYT 238

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
           I + +LC+ N +   + +  +M + G  PN+  +  +++ +CK G + +AY L   ++  
Sbjct: 239 IYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVA 298

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
               +V  +  L+DGF + R L  A  L+  MV+ G  PN+  Y  LI G  ++     A
Sbjct: 299 ELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEA 358

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
              L  +ES   +PD+  + +LI+ L       +A  ++  +   ++ P S T+ SL+  
Sbjct: 359 VGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHG 418

Query: 370 VC----LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
            C    +     L  ++     VE +++ ++ L+  +C       A+ LY  M  KG  P
Sbjct: 419 YCKEYNMEQALDLCSEMTAS-GVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVP 477

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           D  ++  L+        + EA+ +Y  ++      N H    +VD   + GR   AI  +
Sbjct: 478 DVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFY 537

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
           +    ++   + V +T  I GL + G    A   +S M+   + P+  +Y  ML    +E
Sbjct: 538 QENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQE 597

Query: 546 RNIKMVKRLLQDVIDARI 563
           + I     L  D+I   I
Sbjct: 598 KRITDTMMLQCDMIKTGI 615



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 119/524 (22%), Positives = 220/524 (41%), Gaps = 62/524 (11%)

Query: 55  STLLNCPSDLIALSFFIWCAKQR-DYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARV 113
             +L C S   A   F   ++ R    +D+QSF  +I V   LTG  +        LAR 
Sbjct: 46  EAILKCRSAEEAFKLFETSSRSRVSKSNDLQSFSAVIHV---LTGAHKYT------LAR- 95

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGM---VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV 170
            C+IK+    L  R+    E   M   +  A +++    F+   F+  ++M+ L ++G  
Sbjct: 96  -CLIKS----LIERLKRHSEPSNMSHRLFNALEDIQSPKFSIGVFSL-LIMEFL-EMGLF 148

Query: 171 DLGIKVLKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
           +  + V +E +  P+  +    L  L +     +V     +M+ +G  P+V ++ +L  C
Sbjct: 149 EEALWVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQC 208

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
             K G  ++  +LL  M +LG                                     PN
Sbjct: 209 CFKQGLYSKKEKLLDEMTSLGIK-----------------------------------PN 233

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
           V  YT  I           A    ++++  G  P+L  ++ +ID   K G+   A  +Y 
Sbjct: 234 VYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYK 293

Query: 350 GLLELKLVPDSYTFCSLLSTVCLSGRF----SLLPKLVCGLEVEADLVVYNALLSYFCKA 405
            +L  +L+P+   F +L+   C +       SL   +V    V+ +L VYN L+   CK+
Sbjct: 294 EILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMV-KFGVDPNLYVYNCLIHGHCKS 352

Query: 406 GFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVH 465
           G   +AV L + M     +PD +++  L+ GLC   ++ EA  ++Q +       ++  +
Sbjct: 353 GNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATY 412

Query: 466 TAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKH 525
            +++    +     +A+ L           ++++++  I G       + A  LY +M  
Sbjct: 413 NSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTI 472

Query: 526 IAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
             + P+  TY  ++ +  KE N+K   RL  D+++A I  + HT
Sbjct: 473 KGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHT 516



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 90/387 (23%), Positives = 175/387 (45%), Gaps = 6/387 (1%)

Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
           ++ +F +L+  F +MG   EA   L +   +  S    A   +++G  R RR D     +
Sbjct: 131 SIGVFSLLIMEFLEMGLFEEA---LWVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDY 187

Query: 279 EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
           + M+  G  P+V  Y  L +   +  ++S     LD + S G  P++  + + I  L + 
Sbjct: 188 QLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRD 247

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL---LPKLVCGLEVEADLVVY 395
              ++A  +++ + +  ++P+ YT+ +++   C +G       L K +   E+  ++VV+
Sbjct: 248 NKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVF 307

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
             L+  FCKA     A  L+  M+  G  P+ Y +  L+ G C +  + EA+ +   +  
Sbjct: 308 GTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMES 367

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
            N + +   +T +++ L    +  +A +LF++   E+      +Y   I G  +    E+
Sbjct: 368 LNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQ 427

Query: 516 AYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTK 575
           A  L S+M    V PN  T+  ++  +C  R+IK    L  ++    I  D  T   L  
Sbjct: 428 ALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALID 487

Query: 576 FIFKFHSSSSAVNQLVEMCNLGLIPDE 602
             FK  +   A+    +M   G+ P++
Sbjct: 488 AHFKEANMKEALRLYSDMLEAGIHPND 514



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 80/185 (43%), Gaps = 37/185 (20%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           PN ++F+  +   C + D+     +   M  KG  P+V  +  L++   K   + EA +L
Sbjct: 442 PNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRL 501

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA-----------------GY--LWEKMVQ 283
              M+  G   + + +  L+DGF +  RL +A                 G+  L E + Q
Sbjct: 502 YSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQ 561

Query: 284 NG----------------CSPNVVTYTSLIKGFMEAKMFSIAFSF-LDMLESEGHAPDLV 326
           NG                 +P++ +Y S++KG ++ K  +       DM+++ G  P+L+
Sbjct: 562 NGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKT-GILPNLL 620

Query: 327 FHNVL 331
            + +L
Sbjct: 621 VNQLL 625


>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 790

 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 115/521 (22%), Positives = 232/521 (44%), Gaps = 11/521 (2%)

Query: 48  LAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIV 107
           L P +V + L +   + IAL FF W  +Q  Y HD   +  M+ ++++ T   +  R I+
Sbjct: 162 LNPRLVCAVLRSQDDERIALDFFYWADRQWRYRHDAIVYYTMLDILSK-TRLCQGARRIL 220

Query: 108 GELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKI 167
             + R G     + F   +  Y R  M    L     M + G  P+    N  + VL K 
Sbjct: 221 RLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRILTLMQKAGVEPDLSICNTAIYVLVKG 280

Query: 168 GRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMF 223
            +++  ++ L+  ++    P+ +S+N  +   C ++ + +  ++I  M  KG  P+   +
Sbjct: 281 NKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSY 340

Query: 224 EILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN-AWTVLIDGFRRLRRLDMAGYLWEKMV 282
             ++   CK  ++ E  +L+  M+     +     +  LI    +    D A     +  
Sbjct: 341 YTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAE 400

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
           + G   + V Y++++  F + K    A S +  + S+G  PD+V +  +ID   ++G  D
Sbjct: 401 EKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKID 460

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE----ADLVVYNAL 398
           +A  +   + +    P++ T+  LL+ +C +G+ SL  + +  +  E     + + Y+A+
Sbjct: 461 EAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGK-SLEAREMINVSEEHWWTPNAITYSAV 519

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           +    + G  ++A  L   M++KGF P+      L++ LC  + +  A    +  +    
Sbjct: 520 MHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGC 579

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
           AVN    T+++    + G    A+ +     +     D ++YT     L +  R +EA  
Sbjct: 580 AVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASE 639

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           L  +M    + P   TYR ++  FC+   +  + +LL+ +I
Sbjct: 640 LIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKMI 680



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 93/419 (22%), Positives = 178/419 (42%), Gaps = 6/419 (1%)

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           +F+  + +  +   + N   ++ +M + G  P++ +    +    K  ++ +A + L  M
Sbjct: 234 AFSYVMVSYSRAGMLRNALRILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERM 293

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM--EAK 304
              G    + ++  LI G+  + R+D A  L  +M   GC P+ V+Y +++  F+  + K
Sbjct: 294 KVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVM-AFLCKDRK 352

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
           +  +     +M+++    PD V +N LI  LSK G  DDAL       E     D   + 
Sbjct: 353 VEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYS 412

Query: 365 SLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
           +++ + C +        LV  +  +    D+V Y A++  FC+ G  ++A K+   M   
Sbjct: 413 AVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKH 472

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
           G  P+  ++  LL GLC   K  EA  +      +    NA  ++A++  L   G+  +A
Sbjct: 473 GCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEA 532

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
             L R  I + +  + V   + I+ L        A     +  H     N   +  ++  
Sbjct: 533 CDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYG 592

Query: 542 FCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
           FC+  ++     +L+D+  +    D  T   L   + K      A   +V+M   G+ P
Sbjct: 593 FCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDP 651



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/351 (20%), Positives = 124/351 (35%), Gaps = 75/351 (21%)

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
           T L + + T L  G RR+ RL         M + G   +   ++ ++  +  A M   A 
Sbjct: 202 TMLDILSKTRLCQGARRILRL---------MTRRGIERSPEAFSYVMVSYSRAGMLRNAL 252

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
             L +++  G  PDL   N  I  L K    + AL                     L  +
Sbjct: 253 RILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKAL-------------------RFLERM 293

Query: 371 CLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
            ++G             +E D+V YN L+  +C     + A++L   M  KG  PD  S+
Sbjct: 294 KVAG-------------IEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSY 340

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             ++  LC  RK++E   + + +V N+  +                              
Sbjct: 341 YTVMAFLCKDRKVEEVKRLMENMVQNSNLIP----------------------------- 371

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
                D V+Y   I  L + G  ++A +   + +      +   Y  ++ SFCK +NI  
Sbjct: 372 -----DQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDK 426

Query: 551 VKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            K L+ D+       D  T   +     +      A   L +M   G  P+
Sbjct: 427 AKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPN 477


>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
          Length = 826

 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 126/566 (22%), Positives = 238/566 (42%), Gaps = 91/566 (16%)

Query: 65  IALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVG--ELARVGCVIKAQTF 122
           + L+FF W +KQ    + +  F  + S + +L  RF   + I    E  +   +I     
Sbjct: 76  LGLNFFEWASKQSTLSNSLDGF--VCSSLLKLLARFRVFKEIENLLETMKSKELIPTCEA 133

Query: 123 LLFLRIYWRGEMYGMVLEAFD----EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK 178
           L F+   + G   G+V EA +     +      P+ FA N ++++L   G+V++  KV  
Sbjct: 134 LSFVISAYAGS--GLVKEALELYNTVIDVHNCVPDVFACNSLLNLLVHHGKVEIARKVYD 191

Query: 179 ETQ---------------------------------------LPNFLSFNIALCNLCKLN 199
           E                                         +PN + +N  +   CK  
Sbjct: 192 EMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHLIEKRWGKGCVPNIVFYNTLIDGYCKNG 251

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
           D+     +   +  KGF P V+ +  ++N FCK G+     +LL  M   G ++S+  + 
Sbjct: 252 DIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFN 311

Query: 260 VLIDG-FRRLRRLDMAGYL-WEKMVQNGCSPNVVTYTSLIKG------FMEAK------- 304
            +ID  F+    ++ A  + W  M+++GC P++ TY +LI G        EA+       
Sbjct: 312 GIIDARFKHGCEIEAADAVRW--MIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAI 369

Query: 305 ---MFSIAFSFLDMLES-------------------EGHAPDLVFHNVLIDCLSKMGSYD 342
              +F   FS+  ++ +                    GH  DL+ +  L+  L   G  D
Sbjct: 370 RRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVD 429

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALL 399
            AL V D ++E  ++PD+  +  L+S +C  GRF    +L+  +    V  D  V   L+
Sbjct: 430 VALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLV 489

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
             F + G  ++A KL+   +++G          +++G C    +++A+  ++ +     +
Sbjct: 490 DGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHS 549

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            +   ++ I+D  ++      A+++F   + +    +VV++T  I G    G    A  +
Sbjct: 550 PDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKV 609

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKE 545
           + +M+     PN  TY +++  FCKE
Sbjct: 610 FEEMRSFGFEPNVVTYTILIGYFCKE 635



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 123/587 (20%), Positives = 228/587 (38%), Gaps = 92/587 (15%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           K + +   V+++  MI+   +  G+FE V  ++ E+   G  +  Q F   +   ++   
Sbjct: 264 KVKGFLPTVKTYGAMINAFCK-KGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFK--- 319

Query: 135 YGMVLEAFD------EMG--------------------------------RFGFTPNTFA 156
           +G  +EA D      E G                                R G  PN F+
Sbjct: 320 HGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFS 379

Query: 157 RNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
              ++    K G      +L I++ +     + +++   +  L    +V     V   M+
Sbjct: 380 YTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMM 439

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
            +G  P+  ++ +L++  CK GR   A QLL  M+    +        L+DGF R   LD
Sbjct: 440 ERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLD 499

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A  L++  ++ G   +VV   ++IKG+ +  M + A      + +  H+PD   ++ +I
Sbjct: 500 EAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTII 559

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VE 389
           D   K      AL ++  +L+    P+  TF SL++  C +G  +   K+   +     E
Sbjct: 560 DGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFE 619

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            ++V Y  L+ YFCK G   +A   +  ML     P++ +F  L+ GL            
Sbjct: 620 PNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGLTNN--------- 670

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
             GI +++   N+  +                ++ F   I + +   + +Y   +  L +
Sbjct: 671 -NGIAISSKRSNSQPNL--------------TLEFFGMMISDGWDWRIAAYNSILLCLCQ 715

Query: 510 GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK---------MVKRLLQDVID 560
               + A  L+ +M     PP+  ++  +L   C E  ++           +R LQ  + 
Sbjct: 716 HKMVKPALQLHDKMMSKGFPPDPVSFIALLHGLCLEGRLQDWNNVIPCNFNERQLQIAVK 775

Query: 561 ARIELDYHTSIRLTKFI----------FKFHSSSSAVNQLVEMCNLG 597
              +LD   S  LT             FKFH+   +     E  + G
Sbjct: 776 YSEKLDQFLSEGLTSDASLLLQTLVEKFKFHNQKKSHQDREEKPDFG 822



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 89/449 (19%), Positives = 193/449 (42%), Gaps = 27/449 (6%)

Query: 204 VKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL-SVNAWTVLI 262
           +++++  M  K   P       +++ +   G + EA +L   +I +   +  V A   L+
Sbjct: 115 IENLLETMKSKELIPTCEALSFVISAYAGSGLVKEALELYNTVIDVHNCVPDVFACNSLL 174

Query: 263 DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
           +      ++++A  ++++MV      +  T   + KG  +          ++    +G  
Sbjct: 175 NLLVHHGKVEIARKVYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHLIEKRWGKGCV 234

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL 382
           P++VF+N LID   K G  + A  ++  L     +P   T+ ++++  C  G+F  + KL
Sbjct: 235 PNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKL 294

Query: 383 VCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
           +  ++   +   L ++N ++    K G   +A      M++ G  PD  ++  L+ G C 
Sbjct: 295 LVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCS 354

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
             K+ EA  + +  +      N   +T ++    + G   +A +L        + LD+++
Sbjct: 355 KGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIA 414

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           Y   + GL+  G  + A  +  +M    + P+A  Y V++   CK+      K+LL +++
Sbjct: 415 YGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEML 474

Query: 560 DARIELDY------------HTSIRLTKFIFKFHSSSSAVNQLVE-------MCNLGLIP 600
           D  +  D             H ++   K +F+          +VE        C  G++ 
Sbjct: 475 DQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMN 534

Query: 601 DEM--WRKL--GLLSDETMTPVSLFDGFV 625
           D +  ++++  G+ S +  T  ++ DG+V
Sbjct: 535 DALLCFKRMFNGVHSPDEFTYSTIIDGYV 563


>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
 gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
          Length = 554

 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 116/473 (24%), Positives = 204/473 (43%), Gaps = 20/473 (4%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYW------RGEMYGMVLEAFDEMGRFGFT 151
           GR   VR   G LA  G   +  TF     +         GE  GM+      MGR G  
Sbjct: 6   GRHADVRRAFGILASAGA--RPDTFAWNKAVQACVAAGDLGEAVGMLRR----MGRDGAP 59

Query: 152 P-NTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKD 206
           P N F+ N+V+  +++ GR    ++V  E      LPN +++N  +    K  D+     
Sbjct: 60  PPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFR 119

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
           +   MV  G  PN   + +LL+  C+ GR+ E   LL  M +         +++L DG  
Sbjct: 120 LRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLS 179

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
           R         L+ K ++NG +    T + L+ G  +    SIA   L  L + G  P  V
Sbjct: 180 RNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRV 239

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL 386
            +N LI+   + G  + A   +  +    + PD  T+ +L++ +C + R +    L+  +
Sbjct: 240 IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM 299

Query: 387 E---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
           +   V   +  +N L+  + + G   +   + + M + G  P+  S+  ++   C   KI
Sbjct: 300 QDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKI 359

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
            EA+ +   +   +   NA V+ AI+D  +E G   +A  L  +         +V+Y + 
Sbjct: 360 PEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLL 419

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
           I+GL    +  EA  + + + +  + P+A +Y  ++ + C   NI     L Q
Sbjct: 420 IKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQ 472



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 112/484 (23%), Positives = 206/484 (42%), Gaps = 52/484 (10%)

Query: 130 WRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNF 185
           WR    G  +E FDEM      PN    N ++D   K G ++ G ++  +       PN 
Sbjct: 74  WRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNA 133

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN--------------------VRMF-- 223
           +++N+ L  LC+   +     ++  M  +   P+                    + +F  
Sbjct: 134 ITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGK 193

Query: 224 -------------EILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
                         ILLN  CK G+++ A ++L  ++  G   +   +  LI+G+ +   
Sbjct: 194 YLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGE 253

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           L+ A   + +M      P+ +TY +LI G  +A+  + A   L  ++  G  P +   N 
Sbjct: 254 LEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNT 313

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---- 386
           LID   + G  +    V   + E  L P+  ++ S+++  C +G+   +P+ V  L    
Sbjct: 314 LIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK---IPEAVAILDDMF 370

Query: 387 --EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
             +V  +  VYNA++  + + G  +QA  L   M   G +P   ++  L++GLC   +I 
Sbjct: 371 HKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQIS 430

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD--VVSYTV 502
           EA  +   +  +    +A  +  ++      G   KA+ L +R  + KY +   V +Y  
Sbjct: 431 EAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQR--MHKYGIKSTVRTYHQ 488

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
            I GL   GR  E   LY +M    V P+   + +M+ ++ K  N    + L ++++  R
Sbjct: 489 LISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKR 548

Query: 563 IELD 566
              D
Sbjct: 549 NNHD 552



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 102/426 (23%), Positives = 181/426 (42%), Gaps = 10/426 (2%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYP-NVRMFEILLNCFCKMGRIAEAYQ 241
           P+  ++N A+       D+     ++  M R G  P N   + +++    + GR  +A +
Sbjct: 25  PDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVE 84

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           +   M       +   +  +IDG  +   L+    L ++MV +G  PN +TY  L+ G  
Sbjct: 85  VFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLC 144

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
            A       + LD + S+   PD   +++L D LS+ G     L ++   L+  +    Y
Sbjct: 145 RAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDY 204

Query: 362 TFCSLLSTVCLSGRFSLLPKLVCGLEVEADL----VVYNALLSYFCKAGFPNQAVKLYNT 417
           T   LL+ +C  G+ S+  +++  L V A L    V+YN L++ +C+ G    A   +  
Sbjct: 205 TCSILLNGLCKDGKVSIAEEVLQSL-VNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQ 263

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT--AIVDRLIEA 475
           M  +   PD+ ++  L+ GLC A +I  A ++   + M +  VN  V T   ++D     
Sbjct: 264 MKSRHIKPDHITYNALINGLCKAERITNAQDLL--MEMQDNGVNPTVETFNTLIDAYGRT 321

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
           G+  K   +           +VVSY   +    + G+  EA  +   M H  V PNA  Y
Sbjct: 322 GQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVY 381

Query: 536 RVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCN 595
             ++ ++ +         L++ +    I     T   L K +      S A   +  + N
Sbjct: 382 NAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSN 441

Query: 596 LGLIPD 601
             LIPD
Sbjct: 442 HRLIPD 447



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/386 (22%), Positives = 169/386 (43%), Gaps = 45/386 (11%)

Query: 85  SFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTF-LLFLRIYWRGEMYGMVLEAFD 143
           +++ ++S + R  GR      ++ E+A    V    T+ +LF  +   G+   M L  F 
Sbjct: 135 TYNVLLSGLCR-AGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAM-LSLFG 192

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE----TQLPNFLSFNIALCNLCKLN 199
           +  + G T   +  +I+++ L K G+V +  +VL+       +P  + +N  +   C+  
Sbjct: 193 KYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTG 252

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
           ++       G M  +   P+   +  L+N  CK  RI  A  LL  M   G + +V  + 
Sbjct: 253 ELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFN 312

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME----------------- 302
            LID + R  +L+    +  +M +NG  PNVV+Y S++  F +                 
Sbjct: 313 TLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHK 372

Query: 303 -----AKMFSI-------------AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
                A++++              AF  ++ ++S G +P +V +N+LI  L       +A
Sbjct: 373 DVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEA 432

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL---LPKLVCGLEVEADLVVYNALLSY 401
            ++ + L   +L+PD+ ++ +L+S  C  G       L + +    +++ +  Y+ L+S 
Sbjct: 433 EEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISG 492

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDN 427
              AG  N+   LY  M+     P N
Sbjct: 493 LGGAGRLNEMEYLYQKMMQNNVVPSN 518


>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
          Length = 700

 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 112/501 (22%), Positives = 202/501 (40%), Gaps = 62/501 (12%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
           AL FF W  KQ  Y H+  ++  MI ++ R    F  ++ ++ ++   G  I       F
Sbjct: 199 ALRFFQWADKQEGYDHNTDAYFTMIDILGR-AKMFTELQSLLQKMQTQGREITRSMLHSF 257

Query: 126 LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF 185
           +  Y R   +   LEAF+ M   G+ P               G +D              
Sbjct: 258 VMSYGRSGRFKESLEAFNLMKEMGYEP---------------GLIDT------------- 289

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGL 245
            ++N  L +L K   +   +++   M+  G   N   +  ++ CF    ++ +A +LL  
Sbjct: 290 -AYNSVLVSLVKNKKLDMAENLFAQMINNGVSCNNLTYTSMIQCFFLKEKMEDAMKLLDD 348

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           MI    +  V  +T++I    + + ++ A  + +KM +NGC PN+ TY +LI+G    + 
Sbjct: 349 MIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRR 408

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
              A   + ++E  G  P++  + +L   L K+   D A ++++  L   L P+  T   
Sbjct: 409 PEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVT--- 465

Query: 366 LLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
                                        YN LL+ +C+     +A+ +   M     TP
Sbjct: 466 -----------------------------YNTLLNGYCRGSRLIEAMDILKEMHQNDCTP 496

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           D+ ++  L++GL    ++ +A+ ++  +      VN      +   L   G    A   +
Sbjct: 497 DHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARVGNHKDASIFY 556

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
           RR     +      Y +AI  L   G  EEA  L  +M +    PN  TY  M+  FC++
Sbjct: 557 RRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQ 616

Query: 546 RNIKMVKRLLQDVIDARIELD 566
             +     +L  +I+  I  D
Sbjct: 617 GRLDDADAMLNFMIENGIGPD 637



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/326 (19%), Positives = 138/326 (42%), Gaps = 7/326 (2%)

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           G   + +A+  +ID   R +       L +KM   G         S +  +  +  F  +
Sbjct: 211 GYDHNTDAYFTMIDILGRAKMFTELQSLLQKMQTQGREITRSMLHSFVMSYGRSGRFKES 270

Query: 310 FSFLDMLESEGHAP---DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
               ++++  G+ P   D  +++VL+  L K    D A +++  ++   +  ++ T+ S+
Sbjct: 271 LEAFNLMKEMGYEPGLIDTAYNSVLVS-LVKNKKLDMAENLFAQMINNGVSCNNLTYTSM 329

Query: 367 LSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           +    L  +     KL+  +       D+V Y  ++S  CK     QA  +   M + G 
Sbjct: 330 IQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGC 389

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
            P+ Y++  L++GLC  R+ +EA+ +   +       N + +T +   L +  R  +A +
Sbjct: 390 EPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKE 449

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           +F  A+      + V+Y   + G   G R  EA  +  +M      P+  TY  ++    
Sbjct: 450 MFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLV 509

Query: 544 KERNIKMVKRLLQDVIDARIELDYHT 569
           +   +    R+  ++ +   ++++ T
Sbjct: 510 QGNQLPDALRMHDEMENKGYDVNFDT 535



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 63/320 (19%), Positives = 138/320 (43%), Gaps = 5/320 (1%)

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
           Q G   N   Y ++I     AKMF+   S L  ++++G        +  +    + G + 
Sbjct: 209 QEGYDHNTDAYFTMIDILGRAKMFTELQSLLQKMQTQGREITRSMLHSFVMSYGRSGRFK 268

Query: 343 DALDVYDGLLELKLVPD--SYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNA 397
           ++L+ ++ + E+   P      + S+L ++  + +  +   L   +    V  + + Y +
Sbjct: 269 ESLEAFNLMKEMGYEPGLIDTAYNSVLVSLVKNKKLDMAENLFAQMINNGVSCNNLTYTS 328

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
           ++  F        A+KL + M+   + PD  ++  ++  LC  + I++A  V Q +  N 
Sbjct: 329 MIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENG 388

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAY 517
              N + + A++  L    R  +A++L         P ++ +YT+   GL +  R + A 
Sbjct: 389 CEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAK 448

Query: 518 ILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFI 577
            ++++     + PN  TY  +L  +C+   +     +L+++       D+ T   L + +
Sbjct: 449 EMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGL 508

Query: 578 FKFHSSSSAVNQLVEMCNLG 597
            + +    A+    EM N G
Sbjct: 509 VQGNQLPDALRMHDEMENKG 528



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/231 (22%), Positives = 104/231 (45%), Gaps = 5/231 (2%)

Query: 376 FSLLPKLVCGLEVEADLVVYNALLSY---FCKAGFPNQAVKLYNTMLDKGFTPD--NYSF 430
           F+ L  L+  ++ +   +  + L S+   + ++G   ++++ +N M + G+ P   + ++
Sbjct: 232 FTELQSLLQKMQTQGREITRSMLHSFVMSYGRSGRFKESLEAFNLMKEMGYEPGLIDTAY 291

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             +L  L   +K+D A N++  ++ N  + N   +T+++       +   A++L    I 
Sbjct: 292 NSVLVSLVKNKKLDMAENLFAQMINNGVSCNNLTYTSMIQCFFLKEKMEDAMKLLDDMIQ 351

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
             Y  DVV+YT+ I  L +    E+AY +  +M+     PN YTY  ++   C  R  + 
Sbjct: 352 NNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEE 411

Query: 551 VKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
              L+  +    +  + +T   LT  + K      A     E    GL P+
Sbjct: 412 ALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPN 462


>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
          Length = 796

 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 107/485 (22%), Positives = 206/485 (42%), Gaps = 8/485 (1%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET 180
           TF L +  +         L     M  FG +P+    N +++   + G +     +L   
Sbjct: 210 TFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARM 269

Query: 181 Q----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
           +     P   ++N  +    +L  +     V+  M   GF P++R + +L    C+ G++
Sbjct: 270 KRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKV 329

Query: 237 AEAYQLLGLMITLGTSL-SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
            EA++L   M  LGT+L  V  +  L+D   + R    A  L E+M   G  P +VT+  
Sbjct: 330 DEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNI 389

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           ++K   +      A   L+ +  EG APD++ +N LID   K G+   A  + D ++   
Sbjct: 390 VVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKG 449

Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAV 412
           L  D++T  ++L  +C   R+    +L+          D V Y  +++ + K   P  A+
Sbjct: 450 LKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPAL 509

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
           +L++ M+++   P   ++  L++GLC   ++ EAI+     V      +   +  I+   
Sbjct: 510 RLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAY 569

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
            + G    A +   + +   +  DVV+    + GL   G+ ++A  L+          + 
Sbjct: 570 CKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDV 629

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVE 592
            TY  ++ S CK  ++        D+    ++ D  T   +   + +   S  A N L +
Sbjct: 630 ITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHK 689

Query: 593 MCNLG 597
           + + G
Sbjct: 690 LADSG 694



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 115/513 (22%), Positives = 216/513 (42%), Gaps = 55/513 (10%)

Query: 52  IVHSTLLN--CPSDLIALSFFIWCAKQRDYFHDVQ-SFDHMISVVTRLTGRFETVRGIVG 108
           + ++TLLN  C   ++  +  +    +RD     Q +++ ++S   RL        G + 
Sbjct: 244 VTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARL--------GWIK 295

Query: 109 ELARVGCVIKAQTFLLFLRIYWRGEM----YGMVLEAF---DEMGRFGFT-PNTFARNIV 160
           +  +V   + A  F   LR Y    M     G V EAF   DEM R G   P+    N +
Sbjct: 296 QATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTL 355

Query: 161 MDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
           +D  FK       +++L+E +     P  ++ NI + +LCK   +      +  +  +G 
Sbjct: 356 VDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGL 415

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
            P+V  +  L++ +CK G +A+A+ L+  M+  G  +       ++    +++R + A  
Sbjct: 416 APDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEE 475

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           L     Q G  P+ V+Y +++  + +      A    D +      P +  +N LI  L 
Sbjct: 476 LLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLC 535

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYN 396
           +M    +A+D  +  +E  LVPD  T                                YN
Sbjct: 536 RMERLKEAIDKLNEFVEKGLVPDETT--------------------------------YN 563

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            ++  +CK G    A + +N M++  F PD  +   L+ GLC   K+D+A+ +++  V  
Sbjct: 564 IIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEK 623

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
              V+   +  ++  + + G    A+  F    V+    D  +Y V +  L E GR+EEA
Sbjct: 624 GKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEA 683

Query: 517 YILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
           + +  ++        ++   ++  S   E ++K
Sbjct: 684 HNMLHKLADSGKLSQSFACPLLKPSSADEADVK 716



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 104/430 (24%), Positives = 192/430 (44%), Gaps = 10/430 (2%)

Query: 147 RFGFTPNTFARNIVMDVLFK----IGRVDLGI-KVLKETQL-PNFLSFNIALCNLCKLND 200
           R G  P+  A N V+  L +    + +  L + + L E +L PN  +FN+ +   C    
Sbjct: 164 RRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGT 223

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
           +++    +  M   G  P+   +  LLN  C+ G + EA  LL  M   G + +   +  
Sbjct: 224 LADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNT 283

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           L+  F RL  +  A  + E M   G  P++ TY  L  G  +A     AF   D +E  G
Sbjct: 284 LVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLG 343

Query: 321 HA-PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF-SL 378
            A PD+V +N L+D   K     DAL + + + +  + P   T   ++ ++C  G+    
Sbjct: 344 TALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEA 403

Query: 379 LPKL--VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
           L KL  +    +  D++ YN L+  +CKAG   +A  L + M+ KG   D ++   +L  
Sbjct: 404 LGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYN 463

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
           LC  ++ ++A  +           +   +  ++    +      A++L+ + I  K    
Sbjct: 464 LCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPS 523

Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
           + +Y   I+GL    R +EA    ++     + P+  TY +++ ++CKE +++   R   
Sbjct: 524 ISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHN 583

Query: 557 DVIDARIELD 566
            +++   + D
Sbjct: 584 KMVENSFKPD 593



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/472 (21%), Positives = 206/472 (43%), Gaps = 10/472 (2%)

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCN 194
           L+ F  +      PN +  N+++      G +   +  L   Q     P+ +++N  L  
Sbjct: 193 LDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNA 252

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
            C+   +   + ++  M R G  P    +  L++ F ++G I +A +++  M   G    
Sbjct: 253 HCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPD 312

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCS-PNVVTYTSLIKGFMEAKMFSIAFSFL 313
           +  + VL  G  +  ++D A  L ++M + G + P+VVTY +L+    + +  S A   L
Sbjct: 313 LRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLL 372

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           + +  +G  P LV HN+++  L K G  ++AL   + + E  L PD  T+ +L+   C +
Sbjct: 373 EEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKA 432

Query: 374 GR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
           G     F+L+ ++V G  ++ D    N +L   CK      A +L ++   +GF PD  S
Sbjct: 433 GNVAKAFTLMDEMV-GKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVS 491

Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
           +  ++         + A+ ++  ++      +   +  ++  L    R  +AI      +
Sbjct: 492 YGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFV 551

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
            +    D  +Y + I    + G  E A+  +++M   +  P+  T   ++   C    + 
Sbjct: 552 EKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLD 611

Query: 550 MVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
              +L +  ++   ++D  T   L + + K     +A++   +M   GL PD
Sbjct: 612 KALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPD 663



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 93/397 (23%), Positives = 162/397 (40%), Gaps = 31/397 (7%)

Query: 206 DVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF 265
           DV   ++    +PN   F +L++  C  G +A+A   L  M   G S     +  L++  
Sbjct: 194 DVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAH 253

Query: 266 RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL 325
            R   L  A  L  +M ++G +P   TY +L+  F        A   ++ + + G  PDL
Sbjct: 254 CRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDL 313

Query: 326 VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCG 385
             +NVL   L + G  D+A  + D +  L                      + LP     
Sbjct: 314 RTYNVLAMGLCQAGKVDEAFRLKDEMERLG---------------------TALP----- 347

Query: 386 LEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
                D+V YN L+    K    + A++L   M DKG  P   +   +++ LC   K++E
Sbjct: 348 -----DVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEE 402

Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
           A+   + I     A +   +  ++D   +AG   KA  L    + +   +D  +    + 
Sbjct: 403 ALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLY 462

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
            L +  R E+A  L          P+  +Y  ++ ++ KE N +   RL   +I+ ++  
Sbjct: 463 NLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIP 522

Query: 566 DYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
              T   L K + +      A+++L E    GL+PDE
Sbjct: 523 SISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDE 559



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 82/343 (23%), Positives = 150/343 (43%), Gaps = 16/343 (4%)

Query: 113 VGCVIKAQTFLLFLRIYWRGEM--YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV 170
           VG  +K  TF L   +Y   +M  Y    E      + GF P+  +   VM   FK    
Sbjct: 446 VGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNP 505

Query: 171 DLGIKV----LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEIL 226
           +  +++    ++   +P+  ++N  +  LC++  +    D +   V KG  P+   + I+
Sbjct: 506 EPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNII 565

Query: 227 LNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGC 286
           ++ +CK G +  A++    M+       V     L++G     +LD A  L+E  V+ G 
Sbjct: 566 IHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGK 625

Query: 287 SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALD 346
             +V+TY +LI+   +      A  F D +E +G  PD   +NV++  LS+ G  ++A +
Sbjct: 626 KVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHN 685

Query: 347 VYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEAD-------LVVYNALL 399
           +   L +   +  S+  C LL     S   + + +     E E+        L  Y   L
Sbjct: 686 MLHKLADSGKLSQSFA-CPLLKPS--SADEADVKEHEGKPEAESSEKAQDNALETYMERL 742

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
           +  C  G   +A  + + M+ KG   D  +++ L+ GL   +K
Sbjct: 743 NGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLIKRQK 785


>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Cucumis sativus]
          Length = 505

 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 124/472 (26%), Positives = 203/472 (43%), Gaps = 45/472 (9%)

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCN 194
           L+ F  M   G +P++F+ N  +D+L K G +D       + L  TQ  +  SF I +  
Sbjct: 58  LDGFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGRTQF-DVYSFWITIKA 116

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
            C+  +VS   +++  M   G  PNV ++ IL+   C+ G I +A  +   M  LG + +
Sbjct: 117 FCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAAN 176

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
              +T++I+GF +         L++KM   G  PN+ TY SLI  +      S+AF   D
Sbjct: 177 QYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFD 236

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            +   G A + V +N+LI  L + G    A  + + +    + P + TF  L+  +C +G
Sbjct: 237 EISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTG 296

Query: 375 RF----SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           +     S L KL   + +   LV YN L+S F K G  +   +L   M D+G +P   ++
Sbjct: 297 QLDKALSYLEKLKL-IGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTY 355

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             L+     +  I++A  ++   +M    +    HT                        
Sbjct: 356 TILMNTFVRSDDIEKAYEMFH--LMKRIGLVPDQHT------------------------ 389

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
                    Y V I GL   G   EA  LY  M  + + PN   Y  M+  +CKE N   
Sbjct: 390 ---------YGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYK 440

Query: 551 VKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
             + L++++   +  +  + I   + + K   S  A   L EM   GL P E
Sbjct: 441 ALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLKEMTEAGLKPPE 492



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 73/334 (21%), Positives = 133/334 (39%), Gaps = 63/334 (18%)

Query: 113 VGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDL 172
           VG +    T+   +  Y R     +  + FDE+ + G   N                   
Sbjct: 206 VGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNA------------------ 247

Query: 173 GIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCK 232
                        +++NI +  LC+   VS  + ++  M R    P  R F +L++  C 
Sbjct: 248 -------------VTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCN 294

Query: 233 MGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVT 292
            G++ +A   L  +  +G   ++  + +LI GF ++    +   L  +M   G SP+ VT
Sbjct: 295 TGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVT 354

Query: 293 YTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
           YT L+  F+ +     A+    +++  G  PD   + VLI  L   G+  +A  +Y  ++
Sbjct: 355 YTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMV 414

Query: 353 ELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAV 412
           E+ L P+                                 V+YN +++ +CK     +A+
Sbjct: 415 EMHLQPND--------------------------------VIYNTMINGYCKECNSYKAL 442

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
           K    M+  G TP+  S++  ++ LC   K  EA
Sbjct: 443 KFLEEMVKNGVTPNVASYISTIQILCKDGKSIEA 476


>gi|356557306|ref|XP_003546958.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g65820-like [Glycine max]
          Length = 654

 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 116/521 (22%), Positives = 222/521 (42%), Gaps = 41/521 (7%)

Query: 46  IILAPHIVHSTLLNC-PSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVR 104
           +++ P +    L  C  +  +A  F+ W +KQ  +  D  ++  MI V++R+  +F  V 
Sbjct: 118 VVVRPGLTERVLSRCGDAGNLAYRFYSWASKQSGHRLDHDAYKAMIKVLSRMR-QFGAVW 176

Query: 105 GIVGELARVGC-VIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDV 163
            ++ E+ +    +I  Q F++ +R +    M    +E  DEM ++G  P+ +    ++D 
Sbjct: 177 ALIEEMRQENPHLITPQVFVILMRRFASARMVHKAVEVLDEMPKYGCEPDEYVFGCLLDA 236

Query: 164 LFKIGRVDLGIKVLKETQL---PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV 220
           L K G V     + ++ +    P+   F   L   CK   +   K V+  M   G  P++
Sbjct: 237 LCKNGSVKEAASLFEDMRYRWKPSVKHFTSLLYGWCKEGKLMEAKHVLVQMKDMGIEPDI 296

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
            ++  LL  + + G++ +AY LL  M       +  ++TVLI    +  RL+ A  L+ +
Sbjct: 297 VVYNNLLGGYAQAGKMGDAYDLLKEMRRKRCEPNATSYTVLIQSLCKHERLEEATRLFVE 356

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           M  NGC  +VVTY++LI GF +       +  LD +  +GH P+ V +  ++    K   
Sbjct: 357 MQTNGCQADVVTYSTLISGFCKWGKIKRGYELLDEMIQQGHFPNQVIYQHIMLAHEKKEE 416

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLS 400
            ++  ++ + + ++   P                                DL +YN ++ 
Sbjct: 417 LEECKELVNEMQKIGCAP--------------------------------DLSIYNTVIR 444

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
             CK G   + ++L+N M   G +P   +FV ++ G      + EA   ++ +V      
Sbjct: 445 LACKLGEVKEGIQLWNEMESSGLSPGMDTFVIMINGFLEQGCLVEACEYFKEMVGRGLFT 504

Query: 461 NAHVHT--AIVDRLIEAGRCHKAIQLFRRAIVEK-YPLDVVSYTVAIRGLLEGGRTEEAY 517
                T   +++ L+ A +   A   +      K   L+V ++T+ I  L   G  +EA 
Sbjct: 505 APQYGTLKELMNSLLRAEKLEMAKDAWNCITASKGCQLNVSAWTIWIHALFSKGHVKEAC 564

Query: 518 ILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
                M    + PN  T+  ++    K  N +    + + V
Sbjct: 565 SFCIDMMDKDLMPNPDTFAKLMHGLKKLYNRQFAAEITEKV 605



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 90/210 (42%), Gaps = 1/210 (0%)

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
           V+  L+  F  A   ++AV++ + M   G  PD Y F  LL  LC    + EA ++++ +
Sbjct: 194 VFVILMRRFASARMVHKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDM 253

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
                    H  T+++    + G+  +A  +  +        D+V Y   + G  + G+ 
Sbjct: 254 RYRWKPSVKHF-TSLLYGWCKEGKLMEAKHVLVQMKDMGIEPDIVVYNNLLGGYAQAGKM 312

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
            +AY L  +M+     PNA +Y V++ S CK   ++   RL  ++     + D  T   L
Sbjct: 313 GDAYDLLKEMRRKRCEPNATSYTVLIQSLCKHERLEEATRLFVEMQTNGCQADVVTYSTL 372

Query: 574 TKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
                K+         L EM   G  P+++
Sbjct: 373 ISGFCKWGKIKRGYELLDEMIQQGHFPNQV 402


>gi|147821100|emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]
          Length = 844

 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/423 (24%), Positives = 197/423 (46%), Gaps = 9/423 (2%)

Query: 42  QDFPIILAPHIVHSTLLNCPSDLIALSFFIWCAK-QRDYFHDVQSFDHMISVVTRLTGRF 100
           + +P  L+P  V S +    +  +AL  F    K  R++ H+ +++  MI  +++    F
Sbjct: 93  KPWPQRLSPKRVVSMISRQQNLDLALQIFDHAGKFHRNFAHNYETYLAMIEKLSKARA-F 151

Query: 101 ETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIV 160
           E +  ++ +L +         F+  +R Y       + +  F  +  FG  P+  + N +
Sbjct: 152 EPMETLISQLHKSQIKCGENLFITVIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTL 211

Query: 161 MDVLFKIGRVDLGIKVLKETQ-----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG 215
           ++ L +  R DL   + K  +     +PN  + NI +  LCK ND+     V+  M   G
Sbjct: 212 LNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMG 271

Query: 216 FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAG 275
           F PNV  +  +L  +   G +  A ++ G ++  G       +T+L+DG+ +  R   A 
Sbjct: 272 FIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAV 331

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
            + ++M +N   PN VTY  +I+ + + K      + LD +  + + P       +ID L
Sbjct: 332 KVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDML 391

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA--DLV 393
            + G  + A +++  LL+    PD+    +L+  +C  G+     KL    E  +    +
Sbjct: 392 CEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDEFEKGSIPSTL 451

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            YNAL++  C+ G   +A +L++ M++KG  P+ +++  L++G C      E I V + +
Sbjct: 452 TYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEM 511

Query: 454 VMN 456
           + N
Sbjct: 512 LDN 514



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/315 (20%), Positives = 135/315 (42%), Gaps = 40/315 (12%)

Query: 285 GCSPNVVTYTSLIKGFMEAKMFS-IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
           G  P+V ++ +L+   ++ K F  +   F +  +  G  P++   N+L+  L K    D 
Sbjct: 200 GLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDA 259

Query: 344 ALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE----ADLVVYNALL 399
           A+ V + +  +  +P+  T+ ++L      G   +  + V G  ++     D   Y  L+
Sbjct: 260 AIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDM-VGARRVFGEILDRGWVPDPTTYTILM 318

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
             +CK G    AVK+ + M +    P++ ++  ++   C  +K  E +N+   ++     
Sbjct: 319 DGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYI 378

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD----------------------- 496
            ++ +   ++D L E G+   A +L+++ + +    D                       
Sbjct: 379 PSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKL 438

Query: 497 -----------VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
                       ++Y   I G+ EGG   EA  L+  M      PNA+TY +++  FCK 
Sbjct: 439 FDEFEKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKV 498

Query: 546 RNIKMVKRLLQDVID 560
            N +   R++++++D
Sbjct: 499 GNAREGIRVMEEMLD 513



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 100/227 (44%), Gaps = 5/227 (2%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GRF     ++ E+          T+ + +  Y + +  G VL   D+M    + P++   
Sbjct: 325 GRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALC 384

Query: 158 NIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
             V+D+L + G+V++      K+LK+   P+    +  +  LCK   V   + +      
Sbjct: 385 CRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDEF-E 443

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           KG  P+   +  L+   C+ G + EA +L   M+  G   +   + +LI GF ++     
Sbjct: 444 KGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNARE 503

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
              + E+M+ NGC PN  TY  L++G  E  +     + L M  S G
Sbjct: 504 GIRVMEEMLDNGCLPNKATYAILLEGLYELGLEGEVTNVLSMASSRG 550



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 73/326 (22%), Positives = 134/326 (41%), Gaps = 59/326 (18%)

Query: 289 NVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL-VFHNVLIDCLSKMGSYDD---A 344
           N  TY ++I+   +A+    AF  ++ L S+ H   +    N+ I  +   G       A
Sbjct: 134 NYETYLAMIEKLSKAR----AFEPMETLISQLHKSQIKCGENLFITVIRNYGFAGRPKLA 189

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCK 404
           +  +  +    L P   +F +LL+T+  + RF L+                  L+   C+
Sbjct: 190 IRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRFDLV-----------------HLMFKNCR 232

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV 464
             F              G  P+ ++   L++ LC    ID AI V + +       N   
Sbjct: 233 KKF--------------GIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVT 278

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
           +T I+   +  G    A ++F   +   +  D  +YT+ + G  + GR  +A  +  +M+
Sbjct: 279 YTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEME 338

Query: 525 HIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSS 584
              V PN  TY V++ ++CKE+    V  LL D+++                  K+  SS
Sbjct: 339 ENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEK-----------------KYIPSS 381

Query: 585 SAVNQLVEM-CNLGLIPD--EMWRKL 607
           +   ++++M C  G +    E+W+KL
Sbjct: 382 ALCCRVIDMLCEEGKVEVACELWKKL 407


>gi|297610666|ref|NP_001064867.2| Os10g0479200 [Oryza sativa Japonica Group]
 gi|255679497|dbj|BAF26781.2| Os10g0479200 [Oryza sativa Japonica Group]
          Length = 818

 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 117/462 (25%), Positives = 213/462 (46%), Gaps = 44/462 (9%)

Query: 134 MYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-----PNFLSF 188
           M  + LE F+EM   G +P+ ++ +I+++ L K  +V   +  L+E +      P  ++F
Sbjct: 198 MTDVALELFEEMESCGVSPSEYSHSIIINGLCKQDKVGEALSFLQEARKEGKFKPLGMTF 257

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           NI +  LC    V + K  + +M++ G  P+   F  L++  CK+G + EA  L   +  
Sbjct: 258 NILMSALCNWGFVQSAKSFLCLMLKYGLVPDRYTFSTLIHGLCKVGSMEEALDLFERVTK 317

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
            G  L +  +  LI+G+R L        + + M   G  P++VTYT LI G  E+     
Sbjct: 318 EGMELEIVTYNSLINGYRLLGLTKEIPKIIQMMRGQGVEPDLVTYTILIAGHCESGDVEE 377

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY---DDAL-DVYDGLLELKLVPDS---Y 361
                  +  +G   ++V ++VL++ L K G +   D+ L ++Y+  L++ ++  S   +
Sbjct: 378 GMKVRKDVLDQGLQLNIVTYSVLLNALFKKGMFCEIDNLLGEIYNIGLDMDVIAYSILIH 437

Query: 362 TFCSL---------LSTVCLSGR--------FSLLPKLVCGLE-VEA------------- 390
            +C L          + +C S R        FS+L  L      VEA             
Sbjct: 438 GYCKLGEIEKALQVCNAMCSSQRVMPTSLNHFSILLGLCKKGLLVEARWYLENVARKYQP 497

Query: 391 -DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            D+V YN ++  + K G    AV+LY+ +   G  P   +   LL G C    +  A + 
Sbjct: 498 TDVVFYNVVIDGYAKLGDIVNAVRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESY 557

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
           ++ I ++     A  +T ++D L EAG  +  + LF   + ++   + V+Y+V ++GL +
Sbjct: 558 FRAIQLSGLLPTAVTYTTLMDALSEAGEVNTMLSLFDEMVAKRIKANAVTYSVIVKGLCK 617

Query: 510 GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
             R +EA  +   M    +  +  TY  ++  FC+  N++M 
Sbjct: 618 QLRFDEAINVLKDMDSKGINADPITYNTLIQGFCESENVQMA 659



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 95/445 (21%), Positives = 197/445 (44%), Gaps = 45/445 (10%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKET-----QLPNFLSFNIALCNLCKLNDVSN 203
           G  P+     I++    + G V+ G+KV K+      QL N +++++ L  L K      
Sbjct: 354 GVEPDLVTYTILIAGHCESGDVEEGMKVRKDVLDQGLQL-NIVTYSVLLNALFKKGMFCE 412

Query: 204 VKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT----LGTSLS----- 254
           + +++G +   G   +V  + IL++ +CK+G I +A Q+   M +    + TSL+     
Sbjct: 413 IDNLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQVCNAMCSSQRVMPTSLNHFSIL 472

Query: 255 ---------------------------VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCS 287
                                      V  + V+IDG+ +L  +  A  L++++   G  
Sbjct: 473 LGLCKKGLLVEARWYLENVARKYQPTDVVFYNVVIDGYAKLGDIVNAVRLYDQITVAGMH 532

Query: 288 PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
           P +VT  SL+ G+ +     +A S+   ++  G  P  V +  L+D LS+ G  +  L +
Sbjct: 533 PTIVTCNSLLYGYCKIGDLQLAESYFRAIQLSGLLPTAVTYTTLMDALSEAGEVNTMLSL 592

Query: 348 YDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCK 404
           +D ++  ++  ++ T+  ++  +C   RF     ++  ++   + AD + YN L+  FC+
Sbjct: 593 FDEMVAKRIKANAVTYSVIVKGLCKQLRFDEAINVLKDMDSKGINADPITYNTLIQGFCE 652

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV 464
           +     A  +++ ML +G  P   ++  L+  LC   K+ +A  + + +  N   +    
Sbjct: 653 SENVQMAFHIHDIMLCRGLVPTPVTYNLLINVLCLKGKVIQAEILLESLRENGIKLRKFA 712

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
           +T ++      G    A+ L  + +   +   +  ++ AI  L +    +EA++    M 
Sbjct: 713 YTTLIKAQCAKGMPINAVLLVGKLLDAGFEASIEDFSAAINRLCKRQFAKEAFMFVPIML 772

Query: 525 HIAVPPNAYTYRVMLLSFCKERNIK 549
            + + P+   Y V+  +  K R  K
Sbjct: 773 SVGIYPDTQIYCVLGRALQKNRTGK 797



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 83/344 (24%), Positives = 134/344 (38%), Gaps = 69/344 (20%)

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           W  L + + R + +  A Y+  KM       +V TY SL+ G    +M  +A    + +E
Sbjct: 154 WDALANSYARAQMVHDALYVLSKMSSLNMQISVFTYDSLLHGL---RMTDVALELFEEME 210

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
           S G +P    H+++I+ L K     +AL                   S L      G+F 
Sbjct: 211 SCGVSPSEYSHSIIINGLCKQDKVGEAL-------------------SFLQEARKEGKFK 251

Query: 378 LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
            L             + +N L+S  C  GF   A      ML  G  PD Y+F  L+ GL
Sbjct: 252 PLG------------MTFNILMSALCNWGFVQSAKSFLCLMLKYGLVPDRYTFSTLIHGL 299

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
           C    ++EA++                                   LF R   E   L++
Sbjct: 300 CKVGSMEEALD-----------------------------------LFERVTKEGMELEI 324

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
           V+Y   I G    G T+E   +   M+   V P+  TY +++   C+  +++   ++ +D
Sbjct: 325 VTYNSLINGYRLLGLTKEIPKIIQMMRGQGVEPDLVTYTILIAGHCESGDVEEGMKVRKD 384

Query: 558 VIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           V+D  ++L+  T   L   +FK        N L E+ N+GL  D
Sbjct: 385 VLDQGLQLNIVTYSVLLNALFKKGMFCEIDNLLGEIYNIGLDMD 428


>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
          Length = 563

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 113/481 (23%), Positives = 211/481 (43%), Gaps = 13/481 (2%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR      +V E+   G  +  +T    LR+      +    + FD M R G +P     
Sbjct: 17  GRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVSPMNRGF 76

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALC-----NLCKLNDVSNVKDVIGMMV 212
             ++ V  + G+V+  +  L         S + A C     +LC+     +V +    M+
Sbjct: 77  GALVVVCCREGKVE-EVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRML 135

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
             G  PNV  +   ++  CK   + +A+ +L  M+  G   +V   T LIDG  ++   +
Sbjct: 136 ETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTE 195

Query: 273 MAGYLWEKMVQNGC-SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
            A  L+ K++++    PNV TYT +I G+      + A   L  +  +G  P+   +  L
Sbjct: 196 RAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTL 255

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPK---LVCGLEV 388
           I    K GS+D A ++ + + +   +P+ YT+ +++   C  G+     K   +     +
Sbjct: 256 IGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGL 315

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
           + D + Y  L++  CK G    A+ L++ M++ G  PD  ++  L+   C  R+++E+  
Sbjct: 316 KFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQK 375

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
            +   +M         +T+++    + GR   A+++F R +      D ++Y   I GL 
Sbjct: 376 FFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLC 435

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
           +  R EEA  LY  M    + P   T   +   +C+     +   +L D +D R ++  H
Sbjct: 436 KESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVL-DRLDKRQQV--H 492

Query: 569 T 569
           T
Sbjct: 493 T 493



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 122/484 (25%), Positives = 201/484 (41%), Gaps = 49/484 (10%)

Query: 84  QSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFD 143
           + F  ++ V  R  G+ E V  ++  + R G  +   T  + +R       +  V E F 
Sbjct: 74  RGFGALVVVCCR-EGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFR 132

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLN 199
            M   G  PN       +D L K   V     VL+E       PN  +    +  LCK+ 
Sbjct: 133 RMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIG 192

Query: 200 DVSNVKDVIGMMVRKGFY-PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
                  +   +++   Y PNV  + +++  +C+ G++A A  LL  M+  G   + N +
Sbjct: 193 WTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTY 252

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
           T LI G  +    D A  L  KM Q G  PN+ TY ++I GF +      A+  L M  S
Sbjct: 253 TTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATS 312

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL 378
           +G   D + + +LI    K G    ALD++D ++E    PD   + SL+ST C   +   
Sbjct: 313 QGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEE 372

Query: 379 LPK-----LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
             K     L+ GL        Y ++++ +CK G    A++++  M+  G   D+ ++  L
Sbjct: 373 SQKFFDKCLMIGLLPTKQ--TYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGAL 430

Query: 434 LRGLCGARKIDEAINVYQGI------------------------------VMNNPAVNAH 463
           + GLC   +++EA  +Y+G+                              V++       
Sbjct: 431 ISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKRQQ 490

Query: 464 VHT--AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYS 521
           VHT   +V +L   G    A    ++ + E Y +D  +YT  I    E  R    Y L S
Sbjct: 491 VHTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFINSCYENNR----YALAS 546

Query: 522 QMKH 525
           +M  
Sbjct: 547 EMSE 550



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 123/529 (23%), Positives = 232/529 (43%), Gaps = 27/529 (5%)

Query: 101 ETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF--ARN 158
           E +RG+V      G + +A   +L +R +       + +E  + + R G    +F  AR 
Sbjct: 4   EVMRGMVAAFGEAGRLPEAADMVLEMRSHG----LPLCVETANWVLRVGLETGSFVYARK 59

Query: 159 IVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYP 218
            V D + + G              P    F   +   C+   V  V  ++  M R GF  
Sbjct: 60  -VFDGMTRAGVS------------PMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSL 106

Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
           +     +++   C+ GR  +  +    M+  GT  +V  +T  IDG  + R +  A ++ 
Sbjct: 107 DNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVL 166

Query: 279 EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS-FLDMLESEGHAPDLVFHNVLIDCLSK 337
           E+MV  G  PNV T+T+LI G  +      AF  FL +++S  + P++  + V+I    +
Sbjct: 167 EEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCR 226

Query: 338 MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVV 394
            G    A  +   ++E  L P++ T+ +L+   C  G F    +L+  ++ E    ++  
Sbjct: 227 EGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYT 286

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           YNA++  FCK G   +A K+      +G   D  ++  L+   C    I  A++++  +V
Sbjct: 287 YNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMV 346

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
            N    +   +T+++    +  +  ++ + F + ++        +YT  I G  + GR+ 
Sbjct: 347 ENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRST 406

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLT 574
            A  ++ +M       ++ TY  ++   CKE  ++  K L + ++D R+     T + LT
Sbjct: 407 LALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLT 466

Query: 575 KFIFKFHSSSSAVNQLVEMCNLGLIP--DEMWRKLGLLSDETMTPVSLF 621
               +   +S AV+ L  +     +   D + RKL  L D  +   SLF
Sbjct: 467 FEYCRREKTSIAVSVLDRLDKRQQVHTVDVVVRKLSALGD--VDAASLF 513


>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
 gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
          Length = 951

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 120/561 (21%), Positives = 224/561 (39%), Gaps = 43/561 (7%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV +   ++  + R  G+F     +  E+ ++G      T+   +    +       L  
Sbjct: 291 DVVTLSALVDGLCR-DGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGL 349

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
             EM   G   +      +MD L K G+++    VL+  Q     PNF+++ + +   C+
Sbjct: 350 LGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCR 409

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
             ++   + V+  M  K   PNV  F  ++N   K G + +A   +  M   G + +V  
Sbjct: 410 AGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVT 469

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNV--------------------------- 290
           +  LIDGF + +  + A  ++  M+  G   N                            
Sbjct: 470 YGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMD 529

Query: 291 --------VTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
                   V YT+L+ G  +      AF     L  +  +PD V +NV I+CL  +G + 
Sbjct: 530 ERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFS 589

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALL 399
           +A      +    L PD  T+ ++++  C  G+ S   KL+  ++   ++ +L+ Y  L+
Sbjct: 590 EAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLV 649

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
               +AG   +A  L N M   GF P + +   +L+   G+R+ D  + +++ ++     
Sbjct: 650 VGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLH 709

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            +  V+  +V  L   G    A  +    +      D +++   I G  +    + A+ +
Sbjct: 710 ADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAI 769

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK 579
           Y+QM H  + PN  T+  +L        I     +L D+    +E +  T   L     K
Sbjct: 770 YAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAK 829

Query: 580 FHSSSSAVNQLVEMCNLGLIP 600
             +   A+    EM + G IP
Sbjct: 830 KSNKVEALRLYCEMVSKGFIP 850



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 121/459 (26%), Positives = 208/459 (45%), Gaps = 11/459 (2%)

Query: 153 NTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF----LSFNIALCNLCKLNDVSNVKDVI 208
           +T + NI +  L + G   L   VL E          ++ + AL  LC+   V     + 
Sbjct: 114 DTVSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALA 173

Query: 209 GMMVR-KGFYP-NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
            M+VR +G    +V  +  L++ +CK+  +A A  ++  M T G +L V  +  L+ GF 
Sbjct: 174 EMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFF 233

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
                D A  + E+M  +G  PNVVTYT+LI  + + K    AFS  + +   G  PD+V
Sbjct: 234 HSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVV 293

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLPKL 382
             + L+D L + G + +A  ++  + ++ + P+  T+C+L+ ++  + R S    LL ++
Sbjct: 294 TLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEM 353

Query: 383 VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
           V    V  DLV+Y AL+    K G   +A  +         TP+  ++  L+   C A  
Sbjct: 354 VS-RGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGN 412

Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTV 502
           ID A  V   +   +   N    ++I++ L++ G   KA    R+        +VV+Y  
Sbjct: 413 IDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGT 472

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
            I G  +    E A  +Y  M H  V  N +    ++    K  NI+  + L +D+ +  
Sbjct: 473 LIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERG 532

Query: 563 IELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           + LD+     L   +FK  +  +A     E+    L PD
Sbjct: 533 LLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPD 571



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 108/480 (22%), Positives = 211/480 (43%), Gaps = 23/480 (4%)

Query: 102 TVRGIVGELARVGCVIKAQTFLLFLR---IYWRGEMYGMVLEAF-------------DEM 145
           T   I+  L + GC+ KA  ++  ++   I      YG +++ F              +M
Sbjct: 434 TFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDM 493

Query: 146 GRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDV 201
              G   N F  + +++ L K G ++    + K+      L + +++   +  L K  ++
Sbjct: 494 LHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNM 553

Query: 202 SNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVL 261
                V   ++ K   P+  ++ + +NC C +G+ +EA   L  M   G       +  +
Sbjct: 554 PAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTM 613

Query: 262 IDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH 321
           I    R  +   A  L ++M +N   PN++TYT+L+ G +EA +   A   L+ + S G 
Sbjct: 614 IAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGF 673

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG---RFSL 378
           AP  + H  ++   S     D  L++++ ++   L  D   + +L+  +C  G     ++
Sbjct: 674 APTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATV 733

Query: 379 LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
           +   +    +  D + +NAL+   CK+   + A  +Y  ML +G +P+  +F  LL GL 
Sbjct: 734 VLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLE 793

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
            A +I EA  V   +       N   +  +V    +     +A++L+   + + +     
Sbjct: 794 SAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKAS 853

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           +Y   +    + G   +A  L+S+MK   V   + TY ++L  + K RN   V+ LL+D+
Sbjct: 854 TYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDM 913



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 82/184 (44%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+ ++FN  +   CK + + N   +   M+ +G  PN+  F  LL      GRI EA  +
Sbjct: 745 PDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTV 804

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           L  M  +G   +   + +L+ G+ +      A  L+ +MV  G  P   TY SL+  F +
Sbjct: 805 LSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAK 864

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
           A M + A      ++  G       +++L++  SK+ +  +   +   + EL   P   T
Sbjct: 865 AGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGT 924

Query: 363 FCSL 366
             S+
Sbjct: 925 ISSM 928



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 50/218 (22%), Positives = 89/218 (40%), Gaps = 2/218 (0%)

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
           V AD V YN  L+   + G    A  + + M  +G + D  +    L GLC    + EA 
Sbjct: 111 VAADTVSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAA 170

Query: 448 NVYQGIVMNN--PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
            + + +V       ++     A++D   +      A+ +  R   +   LDVV Y   + 
Sbjct: 171 ALAEMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVA 230

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
           G    G  + A  +  +MK   V PN  TY  ++  +CK + +     L + ++ + +  
Sbjct: 231 GFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLP 290

Query: 566 DYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           D  T   L   + +    S A     EM  +G+ P+ +
Sbjct: 291 DVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHV 328



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 4/179 (2%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
           + +M   G +PN    N ++  L   GR+     VL + +     PN L+++I +    K
Sbjct: 770 YAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAK 829

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            ++      +   MV KGF P    +  L++ F K G + +A +L   M   G   + + 
Sbjct: 830 KSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSST 889

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
           + +L++G+ +LR       L + M + G  P+  T +S+ + F    M   A   L  L
Sbjct: 890 YDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRPGMTGEARRLLKTL 948


>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
          Length = 688

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/403 (25%), Positives = 181/403 (44%), Gaps = 7/403 (1%)

Query: 147 RFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVS 202
           R     ++F  N ++  L   G V    DL +++  E  +P  +++N  +  L +   V 
Sbjct: 268 RLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVE 327

Query: 203 NVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLI 262
             +     M   G  P+V  +  LLN +CK G + EA  L G +   G + +V  + + I
Sbjct: 328 AAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRI 387

Query: 263 DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
           DG+ RL  L+ A  L E+M + GC PNV TYT L+KG +     ++A  F D + S+G  
Sbjct: 388 DGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQ 447

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL 382
           PD   +N  I     +G    AL++ + L+   +  D+ T+  L+  +C +G      +L
Sbjct: 448 PDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKEL 507

Query: 383 VCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
              +    ++ D + Y  L+   C+ G   +A K++N M+  G  P   +F  ++   C 
Sbjct: 508 QMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCR 567

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
              +  A   ++ ++      N   +  ++  L   GR   A   F   +      +  +
Sbjct: 568 RGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYT 627

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
           YT+ I G  + G  E+A   Y +M    + P+  T++ ++  F
Sbjct: 628 YTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALVKGF 670



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 91/367 (24%), Positives = 155/367 (42%), Gaps = 14/367 (3%)

Query: 83  VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF 142
           V +++ MI  + + +G  E  +    E+  +G +    T+   L  Y +       L  F
Sbjct: 310 VVTYNAMIHGLLQ-SGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLF 368

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ-----LPNFLSFNIALCNLCK 197
            ++ R G  P     NI +D   ++G ++   ++LKE       LPN  ++ I +     
Sbjct: 369 GDLRRAGLAPTVLTYNIRIDGYCRLGDLEEA-RILKEEMGEQGCLPNVCTYTILMKGSLN 427

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
           +  ++  ++    M+ KG  P+   +   +     +G IA A +L  +++  G S     
Sbjct: 428 VCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVT 487

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           + +LI G  +   L  A  L  KMV NG  P+ +TYT LI    E  +   A    + + 
Sbjct: 488 YNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMI 547

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
           S+G  P  V   V+I    + G+   A   +  +LE  + P+  T+  L+  +C  GR  
Sbjct: 548 SDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQ 607

Query: 378 LLPK-----LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
           L        L  GL   A+   Y  L+   CK G    A++ Y  M   G  PD  +   
Sbjct: 608 LASHHFHEMLERGLV--ANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKA 665

Query: 433 LLRGLCG 439
           L++G  G
Sbjct: 666 LVKGFDG 672



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/334 (22%), Positives = 139/334 (41%), Gaps = 44/334 (13%)

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           M + G +  V     ++   R   R D    + E+M+Q G  P++VTY +L+  F++   
Sbjct: 160 MASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLKEGR 219

Query: 306 FSIAFSFLDMLESEGHA--PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
                  L  +E+ G    P+ V +NV+I  L++ G  ++A ++ +G + L     S+T+
Sbjct: 220 KDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEG-MRLSKKASSFTY 278

Query: 364 CSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
             L++ +   G    +  L   +E E     +V YNA++    ++G    A   +  M  
Sbjct: 279 NPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRA 338

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
            G  PD  ++  LL G C A  + EA+ ++  +                           
Sbjct: 339 MGLLPDVITYNSLLNGYCKAGNLKEALLLFGDL--------------------------- 371

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
                RRA +      V++Y + I G    G  EEA IL  +M      PN  TY +++ 
Sbjct: 372 -----RRAGLAP---TVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMK 423

Query: 541 SFCKERNIKMVKRLLQDVIDARIELD---YHTSI 571
                 ++ M +    +++   ++ D   Y+T I
Sbjct: 424 GSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRI 457



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 107/254 (42%), Gaps = 35/254 (13%)

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
           ++  S    + S G APD+   N ++  L     +DD   V++ +L+L + P        
Sbjct: 151 TLCLSAFREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEP-------- 202

Query: 367 LSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT-- 424
                                    +V YN LL  F K G  ++   L   M  +G    
Sbjct: 203 ------------------------SIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCL 238

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           P++ ++  ++ GL     ++EA  + +G+ ++  A ++  +  ++  L+  G   K   L
Sbjct: 239 PNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKA-SSFTYNPLITGLLARGCVKKVYDL 297

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
                 E     VV+Y   I GLL+ G  E A + +++M+ + + P+  TY  +L  +CK
Sbjct: 298 QLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCK 357

Query: 545 ERNIKMVKRLLQDV 558
             N+K    L  D+
Sbjct: 358 AGNLKEALLLFGDL 371


>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 825

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/400 (23%), Positives = 188/400 (47%), Gaps = 7/400 (1%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDV 207
           P+    N+++D   K G +    + L E +    LP   ++   +   CK  +   V  +
Sbjct: 238 PHVVFYNMIIDGYCKKGDLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQL 297

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
           +  M  +G   NV++F  +++   K G + EA ++L  M  +G    +  + ++I+   +
Sbjct: 298 LTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCK 357

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
             R++ A  L EK  + G  PN  +YT L+  + +   +  A   L  +   G   DLV 
Sbjct: 358 GGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVS 417

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL- 386
           +   I  +   G  D AL V + ++E  + PD+  +  L+S +C  GR   +  L+  + 
Sbjct: 418 YGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEML 477

Query: 387 --EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
              V+ D+ V+  L+  F + G  ++A+K++  ++ KG  P    +  +++G C   K+ 
Sbjct: 478 DRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMT 537

Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
           +A++    +   + A + + ++ ++D  ++      A+++F + +  K+  +V++YT  I
Sbjct: 538 DALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLI 597

Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
            G  +      A  ++S MK   + PN  TY  ++  F K
Sbjct: 598 NGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFK 637



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 119/500 (23%), Positives = 222/500 (44%), Gaps = 63/500 (12%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           K +     V+++  +I+   +  G FE V  ++ E+A  G  +  + F   +   ++   
Sbjct: 267 KMKGVLPTVETYGALINGFCK-AGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYK--- 322

Query: 135 YGMVLEAFD---EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLS 187
           YG+V EA +    M   G  P+    NI+++   K GR++   ++L++ +    LPN  S
Sbjct: 323 YGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFS 382

Query: 188 FNIALCNLCKLND-------------------------------VSNVKDVIGM----MV 212
           +   +   CK  D                               V+   DV  M    M+
Sbjct: 383 YTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMM 442

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
            KG +P+ +++ IL++  CK GRI     LL  M+       V  +  LIDGF R   LD
Sbjct: 443 EKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELD 502

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A  +++ +++ G  P +V Y ++IKGF +    + A S L+ + S  HAPD   ++ +I
Sbjct: 503 EAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVI 562

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVE 389
           D   K      AL ++  +++ K  P+  T+ SL++  C         K+  G+   ++ 
Sbjct: 563 DGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLV 622

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK----IDE 445
            ++V Y  L+  F KAG P +A  ++  ML  G  P++ +F  L+ GL         I+E
Sbjct: 623 PNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLINGLTNTATSPVLIEE 682

Query: 446 A----------INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
                      ++ +  ++++        + +++  L + G    A  L  + + + + +
Sbjct: 683 KDSKENERSLILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTVDTAQLLLTKMLTKGFLI 742

Query: 496 DVVSYTVAIRGLLEGGRTEE 515
           D V +T  + GL   G+++E
Sbjct: 743 DSVCFTALLHGLCHKGKSKE 762



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 87/372 (23%), Positives = 168/372 (45%), Gaps = 12/372 (3%)

Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL-SVNAWTVLIDGF 265
           V+  M  +   P    F  L+  + + G +  A QL   +  +     +  A  +L++G 
Sbjct: 117 VLENMKAQHLKPTREAFSALILAYAESGSLDRALQLFHTVREMHNCFPTFVASNLLLNGL 176

Query: 266 RRLRRLDMAGYLWEKMVQ--NGCSPNVVTYTS--LIKGFMEAKMFSIAFSFLDMLESEGH 321
            +  ++D+A  L++KM+Q  +G    V  YT+  ++KG             +     +  
Sbjct: 177 VKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIMVKGLCNLGKIEEGRRLIKHRWGKCC 236

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPK 381
            P +VF+N++ID   K G    A    + L    ++P   T+ +L++  C +G F  + +
Sbjct: 237 VPHVVFYNMIIDGYCKKGDLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQ 296

Query: 382 LVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
           L+  +       ++ V+N ++    K G   +A ++   M + G  PD  ++  ++   C
Sbjct: 297 LLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSC 356

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI-QLFRRA-IVEKYPLD 496
              +I+EA  + +         N   +T ++    + G   KA   LFR A I EK   D
Sbjct: 357 KGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKS--D 414

Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
           +VSY   I G++  G  + A ++  +M    V P+A  Y +++   CK+  I  +K LL 
Sbjct: 415 LVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLS 474

Query: 557 DVIDARIELDYH 568
           +++D  ++ D +
Sbjct: 475 EMLDRNVQPDVY 486



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/311 (21%), Positives = 123/311 (39%), Gaps = 43/311 (13%)

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
           W       CS + V ++SL+K     ++F      L+ ++++   P     + LI   ++
Sbjct: 83  WASTRPFSCSLDGVAHSSLLKLLASYRVFPEIELVLENMKAQHLKPTREAFSALILAYAE 142

Query: 338 MGSYDD------------------------------------ALDVYDGLLELK----LV 357
            GS D                                     AL +YD +L+       V
Sbjct: 143 SGSLDRALQLFHTVREMHNCFPTFVASNLLLNGLVKSGKVDVALQLYDKMLQTDDGTGAV 202

Query: 358 PDSYTFCSLLSTVCLSGRFSLLPKLV---CGLEVEADLVVYNALLSYFCKAGFPNQAVKL 414
            D+YT   ++  +C  G+     +L+    G      +V YN ++  +CK G    A + 
Sbjct: 203 VDNYTTSIMVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDLQCATRA 262

Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
            N +  KG  P   ++  L+ G C A + +    +   +      +N  V   ++D   +
Sbjct: 263 LNELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYK 322

Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
            G   +A ++ RR        D+ +Y + I    +GGR EEA  L  + K   + PN ++
Sbjct: 323 YGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFS 382

Query: 535 YRVMLLSFCKE 545
           Y  ++ ++CK+
Sbjct: 383 YTPLMHAYCKK 393


>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Vitis vinifera]
 gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/384 (25%), Positives = 171/384 (44%), Gaps = 44/384 (11%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+   FN+ +  LCK + ++  + + G + ++G  P V  F  L+N +CK G + + ++L
Sbjct: 223 PDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRL 282

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
              M+       V  ++VLI+G  +  +LD A  L+ +M   G  PN VT+T+LI G   
Sbjct: 283 KRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCV 342

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
                +       +  +G  PD++ +N LI+ L K+G   +A  +   + +  L PD +T
Sbjct: 343 TGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFT 402

Query: 363 FCSLLSTVCLSGRFSL---LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
           +  L+   C  G       + K +    +E D V + AL+S FC+ G   +A +    ML
Sbjct: 403 YTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREML 462

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
           + G  PD+ ++  ++ G C                                   + G   
Sbjct: 463 EAGIKPDDATYTMVIHGFC-----------------------------------KKGDVK 487

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
              +L +    + +   VV+Y V + GL + G+ + A +L   M ++ V P+  TY ++L
Sbjct: 488 TGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILL 547

Query: 540 LSFCKERN------IKMVKRLLQD 557
              CK  N      ++  K L+QD
Sbjct: 548 EGHCKHGNREDFDKLQSEKGLVQD 571



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 82/338 (24%), Positives = 157/338 (46%), Gaps = 15/338 (4%)

Query: 232 KMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVV 291
           K+   + A+     ++  G    V  + VL+    +  +++ A  L+ ++ + G  P VV
Sbjct: 202 KLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVV 261

Query: 292 TYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGL 351
           ++ +LI G+ ++      F     +      PD+  ++VLI+ L K G  DDA  ++  +
Sbjct: 262 SFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEM 321

Query: 352 LELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---------VEADLVVYNALLSYF 402
            +  LVP+  TF +L++  C++GR  L      G+E         V+ D++ YN L++  
Sbjct: 322 CDRGLVPNDVTFTTLINGHCVTGRADL------GMEIYQQMLRKGVKPDVITYNTLINGL 375

Query: 403 CKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNA 462
           CK G   +A KL   M  +G  PD +++  L+ G C    ++ A+ + + +V     ++ 
Sbjct: 376 CKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDN 435

Query: 463 HVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQ 522
              TA++      G+  +A +  R  +      D  +YT+ I G  + G  +  + L  +
Sbjct: 436 VAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKE 495

Query: 523 MKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
           M+     P   TY V+L   CK+  +K    LL  +++
Sbjct: 496 MQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLN 533



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 90/398 (22%), Positives = 178/398 (44%), Gaps = 13/398 (3%)

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +G + +  +F +L+N +   G  ++A Q   L+      +  ++   L D   +L     
Sbjct: 149 RGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSP 208

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A   +E+++  G  P+V  +  L+    +    + A      +   G  P +V  N LI+
Sbjct: 209 AWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLIN 268

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEA 390
              K G+ D    +   ++E ++ PD +T+  L++ +C  G+     KL   +C   +  
Sbjct: 269 GYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVP 328

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           + V +  L++  C  G  +  +++Y  ML KG  PD  ++  L+ GLC    + EA  + 
Sbjct: 329 NDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLV 388

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
             +       +   +T ++D   + G    A+++ +  + E   LD V++T  I G    
Sbjct: 389 IEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCRE 448

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
           G+  EA     +M    + P+  TY +++  FCK+ ++K   +LL++     ++ D H  
Sbjct: 449 GQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKE-----MQCDGHVP 503

Query: 571 IRLTKFIF-----KFHSSSSAVNQLVEMCNLGLIPDEM 603
             +T  +      K     +A   L  M NLG++PD++
Sbjct: 504 GVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDI 541



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 128/262 (48%), Gaps = 4/262 (1%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCK 197
           F EM   G  PN      +++     GR DLG+++    L++   P+ +++N  +  LCK
Sbjct: 318 FLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCK 377

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
           + D+   K ++  M ++G  P+   + +L++  CK G +  A ++   M+  G  L   A
Sbjct: 378 VGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVA 437

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T LI GF R  ++  A     +M++ G  P+  TYT +I GF +       F  L  ++
Sbjct: 438 FTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQ 497

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
            +GH P +V +NVL++ L K G   +A  + D +L L +VPD  T+  LL   C  G   
Sbjct: 498 CDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNRE 557

Query: 378 LLPKLVCGLEVEADLVVYNALL 399
              KL     +  D   Y +L+
Sbjct: 558 DFDKLQSEKGLVQDYGSYTSLI 579



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 142/325 (43%), Gaps = 11/325 (3%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCK 197
           F E+G+ G  P   + N +++   K G +D G ++    ++    P+  ++++ +  LCK
Sbjct: 248 FGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCK 307

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
              + +   +   M  +G  PN   F  L+N  C  GR     ++   M+  G    V  
Sbjct: 308 EGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVIT 367

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  LI+G  ++  L  A  L  +M Q G  P+  TYT LI G  +      A      + 
Sbjct: 368 YNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMV 427

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-- 375
            EG   D V    LI    + G   +A      +LE  + PD  T+  ++   C  G   
Sbjct: 428 KEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVK 487

Query: 376 --FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
             F LL ++ C   V   +V YN LL+  CK G    A  L + ML+ G  PD+ ++  L
Sbjct: 488 TGFKLLKEMQCDGHVPG-VVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNIL 546

Query: 434 LRGLC--GARKIDEAINVYQGIVMN 456
           L G C  G R+  + +   +G+V +
Sbjct: 547 LEGHCKHGNREDFDKLQSEKGLVQD 571



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/209 (21%), Positives = 92/209 (44%), Gaps = 1/209 (0%)

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLD-KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
            +LL +       N A  ++ ++L+ +G    N  F  L+     +    +AI  ++ + 
Sbjct: 123 QSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVR 182

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
            +N  +  H    + DRL++      A   +   +   YP DV  + V +  L +  +  
Sbjct: 183 KHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKIN 242

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLT 574
           EA +L+ ++    + P   ++  ++  +CK  N+    RL + +++ R+  D  T   L 
Sbjct: 243 EAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLI 302

Query: 575 KFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
             + K      A    +EMC+ GL+P+++
Sbjct: 303 NGLCKEGQLDDANKLFLEMCDRGLVPNDV 331


>gi|10140738|gb|AAG13570.1|AC037425_1 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 811

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 117/461 (25%), Positives = 213/461 (46%), Gaps = 44/461 (9%)

Query: 134 MYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-----PNFLSF 188
           M  + LE F+EM   G +P+ ++ +I+++ L K  +V   +  L+E +      P  ++F
Sbjct: 198 MTDVALELFEEMESCGVSPSEYSHSIIINGLCKQDKVGEALSFLQEARKEGKFKPLGMTF 257

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           NI +  LC    V + K  + +M++ G  P+   F  L++  CK+G + EA  L   +  
Sbjct: 258 NILMSALCNWGFVQSAKSFLCLMLKYGLVPDRYTFSTLIHGLCKVGSMEEALDLFERVTK 317

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
            G  L +  +  LI+G+R L        + + M   G  P++VTYT LI G  E+     
Sbjct: 318 EGMELEIVTYNSLINGYRLLGLTKEIPKIIQMMRGQGVEPDLVTYTILIAGHCESGDVEE 377

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY---DDAL-DVYDGLLELKLVPDS---Y 361
                  +  +G   ++V ++VL++ L K G +   D+ L ++Y+  L++ ++  S   +
Sbjct: 378 GMKVRKDVLDQGLQLNIVTYSVLLNALFKKGMFCEIDNLLGEIYNIGLDMDVIAYSILIH 437

Query: 362 TFCSL---------LSTVCLSGR--------FSLLPKLVCGLE-VEA------------- 390
            +C L          + +C S R        FS+L  L      VEA             
Sbjct: 438 GYCKLGEIEKALQVCNAMCSSQRVMPTSLNHFSILLGLCKKGLLVEARWYLENVARKYQP 497

Query: 391 -DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            D+V YN ++  + K G    AV+LY+ +   G  P   +   LL G C    +  A + 
Sbjct: 498 TDVVFYNVVIDGYAKLGDIVNAVRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESY 557

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
           ++ I ++     A  +T ++D L EAG  +  + LF   + ++   + V+Y+V ++GL +
Sbjct: 558 FRAIQLSGLLPTAVTYTTLMDALSEAGEVNTMLSLFDEMVAKRIKANAVTYSVIVKGLCK 617

Query: 510 GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
             R +EA  +   M    +  +  TY  ++  FC+  N++M
Sbjct: 618 QLRFDEAINVLKDMDSKGINADPITYNTLIQGFCESENVQM 658



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 92/434 (21%), Positives = 193/434 (44%), Gaps = 45/434 (10%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKET-----QLPNFLSFNIALCNLCKLNDVSN 203
           G  P+     I++    + G V+ G+KV K+      QL N +++++ L  L K      
Sbjct: 354 GVEPDLVTYTILIAGHCESGDVEEGMKVRKDVLDQGLQL-NIVTYSVLLNALFKKGMFCE 412

Query: 204 VKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT----LGTSLS----- 254
           + +++G +   G   +V  + IL++ +CK+G I +A Q+   M +    + TSL+     
Sbjct: 413 IDNLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQVCNAMCSSQRVMPTSLNHFSIL 472

Query: 255 ---------------------------VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCS 287
                                      V  + V+IDG+ +L  +  A  L++++   G  
Sbjct: 473 LGLCKKGLLVEARWYLENVARKYQPTDVVFYNVVIDGYAKLGDIVNAVRLYDQITVAGMH 532

Query: 288 PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
           P +VT  SL+ G+ +     +A S+   ++  G  P  V +  L+D LS+ G  +  L +
Sbjct: 533 PTIVTCNSLLYGYCKIGDLQLAESYFRAIQLSGLLPTAVTYTTLMDALSEAGEVNTMLSL 592

Query: 348 YDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCK 404
           +D ++  ++  ++ T+  ++  +C   RF     ++  ++   + AD + YN L+  FC+
Sbjct: 593 FDEMVAKRIKANAVTYSVIVKGLCKQLRFDEAINVLKDMDSKGINADPITYNTLIQGFCE 652

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV 464
           +     A  +++ ML +G  P   ++  L+  LC   K+ +A  + + +  N   +    
Sbjct: 653 SENVQMAFHIHDIMLCRGLVPTPVTYNLLINVLCLKGKVIQAEILLESLRENGIKLRKFA 712

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
           +T ++      G    A+ L  + +   +   +  ++ AI  L +    +EA++    M 
Sbjct: 713 YTTLIKAQCAKGMPINAVLLVGKLLDAGFEASIEDFSAAINRLCKRQFAKEAFMFVPIML 772

Query: 525 HIAVPPNAYTYRVM 538
            + + P+   Y V+
Sbjct: 773 SVGIYPDTQIYCVL 786



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 83/344 (24%), Positives = 134/344 (38%), Gaps = 69/344 (20%)

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           W  L + + R + +  A Y+  KM       +V TY SL+ G    +M  +A    + +E
Sbjct: 154 WDALANSYARAQMVHDALYVLSKMSSLNMQISVFTYDSLLHGL---RMTDVALELFEEME 210

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
           S G +P    H+++I+ L K     +AL                   S L      G+F 
Sbjct: 211 SCGVSPSEYSHSIIINGLCKQDKVGEAL-------------------SFLQEARKEGKFK 251

Query: 378 LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
            L             + +N L+S  C  GF   A      ML  G  PD Y+F  L+ GL
Sbjct: 252 PLG------------MTFNILMSALCNWGFVQSAKSFLCLMLKYGLVPDRYTFSTLIHGL 299

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
           C    ++EA++                                   LF R   E   L++
Sbjct: 300 CKVGSMEEALD-----------------------------------LFERVTKEGMELEI 324

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
           V+Y   I G    G T+E   +   M+   V P+  TY +++   C+  +++   ++ +D
Sbjct: 325 VTYNSLINGYRLLGLTKEIPKIIQMMRGQGVEPDLVTYTILIAGHCESGDVEEGMKVRKD 384

Query: 558 VIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           V+D  ++L+  T   L   +FK        N L E+ N+GL  D
Sbjct: 385 VLDQGLQLNIVTYSVLLNALFKKGMFCEIDNLLGEIYNIGLDMD 428



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 127/606 (20%), Positives = 247/606 (40%), Gaps = 105/606 (17%)

Query: 54  HSTLLN--CPSDLI--ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGE 109
           HS ++N  C  D +  ALSF     K+  +     +F+ ++S +    G  ++ +  +  
Sbjct: 221 HSIIINGLCKQDKVGEALSFLQEARKEGKFKPLGMTFNILMSALCNW-GFVQSAKSFLCL 279

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
           + + G V    TF   +    +       L+ F+ + + G        N +++    +G 
Sbjct: 280 MLKYGLVPDRYTFSTLIHGLCKVGSMEEALDLFERVTKEGMELEIVTYNSLINGYRLLGL 339

Query: 170 VDLGIKVLK----ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK-----GFYPNV 220
                K+++    +   P+ +++ I +   C+  DV       GM VRK     G   N+
Sbjct: 340 TKEIPKIIQMMRGQGVEPDLVTYTILIAGHCESGDVEE-----GMKVRKDVLDQGLQLNI 394

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
             + +LLN   K G   E   LLG +  +G  + V A+++LI G+ +L  ++ A  +   
Sbjct: 395 VTYSVLLNALFKKGMFCEIDNLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQVCNA 454

Query: 281 MVQNG-CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
           M  +    P  + + S++ G  +  +   A  +L+ +  +    D+VF+NV+ID  +K+G
Sbjct: 455 MCSSQRVMPTSLNHFSILLGLCKKGLLVEARWYLENVARKYQPTDVVFYNVVIDGYAKLG 514

Query: 340 SYDDALDVYD------------------------GLLELK-----------LVPDSYTFC 364
              +A+ +YD                        G L+L            L+P + T+ 
Sbjct: 515 DIVNAVRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESYFRAIQLSGLLPTAVTYT 574

Query: 365 SLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
           +L+  +  +G      SL  ++V    ++A+ V Y+ ++   CK    ++A+ +   M  
Sbjct: 575 TLMDALSEAGEVNTMLSLFDEMVAK-RIKANAVTYSVIVKGLCKQLRFDEAINVLKDMDS 633

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
           KG   D  ++  L++G C +  +  A                H+H               
Sbjct: 634 KGINADPITYNTLIQGFCESENVQMAF---------------HIHD-------------- 664

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
            I L R  +        V+Y + I  L   G+  +A IL   ++   +    + Y  ++ 
Sbjct: 665 -IMLCRGLVPTP-----VTYNLLINVLCLKGKVIQAEILLESLRENGIKLRKFAYTTLIK 718

Query: 541 SFCKE----RNIKMVKRLLQDVIDARIELDYHTSI-RLTKFIFKFHSSSSAVNQLVEMCN 595
           + C +      + +V +LL    +A IE D+  +I RL K  F    +  A   +  M +
Sbjct: 719 AQCAKGMPINAVLLVGKLLDAGFEASIE-DFSAAINRLCKRQF----AKEAFMFVPIMLS 773

Query: 596 LGLIPD 601
           +G+ PD
Sbjct: 774 VGIYPD 779



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/287 (22%), Positives = 122/287 (42%), Gaps = 7/287 (2%)

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N+V+D   K+G +   +++  +  +    P  ++ N  L   CK+ D+   +     +  
Sbjct: 504 NVVIDGYAKLGDIVNAVRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESYFRAIQL 563

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G  P    +  L++   + G +     L   M+      +   ++V++ G  +  R D 
Sbjct: 564 SGLLPTAVTYTTLMDALSEAGEVNTMLSLFDEMVAKRIKANAVTYSVIVKGLCKQLRFDE 623

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  + + M   G + + +TY +LI+GF E++   +AF   D++   G  P  V +N+LI+
Sbjct: 624 AINVLKDMDSKGINADPITYNTLIQGFCESENVQMAFHIHDIMLCRGLVPTPVTYNLLIN 683

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG---RFSLLPKLVCGLEVEA 390
            L   G    A  + + L E  +    + + +L+   C  G      LL   +     EA
Sbjct: 684 VLCLKGKVIQAEILLESLRENGIKLRKFAYTTLIKAQCAKGMPINAVLLVGKLLDAGFEA 743

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
            +  ++A ++  CK  F  +A      ML  G  PD   +  L R L
Sbjct: 744 SIEDFSAAINRLCKRQFAKEAFMFVPIMLSVGIYPDTQIYCVLGRAL 790



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 5/210 (2%)

Query: 132 GEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF----LS 187
           GE+  M L  FDEM       N    ++++  L K  R D  I VLK+          ++
Sbjct: 584 GEVNTM-LSLFDEMVAKRIKANAVTYSVIVKGLCKQLRFDEAINVLKDMDSKGINADPIT 642

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           +N  +   C+  +V     +  +M+ +G  P    + +L+N  C  G++ +A  LL  + 
Sbjct: 643 YNTLIQGFCESENVQMAFHIHDIMLCRGLVPTPVTYNLLINVLCLKGKVIQAEILLESLR 702

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
             G  L   A+T LI           A  L  K++  G   ++  +++ I    + +   
Sbjct: 703 ENGIKLRKFAYTTLIKAQCAKGMPINAVLLVGKLLDAGFEASIEDFSAAINRLCKRQFAK 762

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
            AF F+ ++ S G  PD   + VL   L K
Sbjct: 763 EAFMFVPIMLSVGIYPDTQIYCVLGRALQK 792


>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
          Length = 902

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 162/349 (46%), Gaps = 12/349 (3%)

Query: 136 GMVLEAFDEM----GRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-----PNFL 186
           G V  A D M     R G  PN +    V+    K+GRVD  +KV  E        P  +
Sbjct: 533 GRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAV 592

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
            +N  +   C    +         MV +G    V  + +L++     GR  EAY+L+  M
Sbjct: 593 MYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEM 652

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
              G +  V  + +LI+G  +   +  A  ++E M + G    VVTYT+LI    +    
Sbjct: 653 GGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQV 712

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
                  D     G  PDLV +N LI+  S  G+ D A ++   + + ++ PD  T+ +L
Sbjct: 713 QETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTL 772

Query: 367 LSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           +  +CL GR     KL+  +    ++ DLV YN L+S +   G    A+++ N M++KGF
Sbjct: 773 MRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGF 832

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
            P   ++  L++GLC   + D+A N+ + +V N    +   + ++++ L
Sbjct: 833 NPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 881



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 93/409 (22%), Positives = 189/409 (46%), Gaps = 5/409 (1%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDV 201
           F +M R      T   NI++  L   G+    +++L++   PN +++N  +   C    V
Sbjct: 476 FADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPRPNAVTYNTVIAGFCSRGRV 535

Query: 202 SNVKDVI-GMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG-TSLSVNAWT 259
               D++  M  R G  PN   +  +++ +CK+GR+ EA ++   M+T G        + 
Sbjct: 536 QAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYN 595

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
            LI G+    +LD A    ++MV+ G +  V TY  L+         + A+  ++ +  +
Sbjct: 596 ALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK 655

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
           G APD+  +N+LI+   K G+   AL++++ +    +     T+ +L+  +   G+    
Sbjct: 656 GLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQET 715

Query: 380 PKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
            KL        +  DLV+YNAL++    +G  ++A ++   M  K   PD+ ++  L+RG
Sbjct: 716 DKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRG 775

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
           LC   ++DEA  +   +       +   +  ++      G    A+++    + + +   
Sbjct: 776 LCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPT 835

Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
           +++Y   I+GL + G+ ++A  +  +M    + P+  TY  ++     E
Sbjct: 836 LLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 884



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/414 (22%), Positives = 177/414 (42%), Gaps = 21/414 (5%)

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           F I+L   C  G+ A A +LL  M       +   +  +I GF    R+  A  +  +M 
Sbjct: 491 FNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMREMR 546

Query: 283 Q-NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH-APDLVFHNVLIDCLSKMGS 340
           +  G +PN  TY ++I G+ +      A    D + ++G   P+ V +N LI      G 
Sbjct: 547 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 606

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV---CGLEVEADLVVYNA 397
            D AL   D ++E  +     T+  L+  + + GR +   +LV    G  +  D+  YN 
Sbjct: 607 LDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNI 666

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
           L++  CK G   +A++++  M  +G      ++  L+  L    ++ E   ++   V   
Sbjct: 667 LINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRG 726

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAY 517
              +  ++ A+++    +G   +A ++      ++   D V+Y   +RGL   GR +EA 
Sbjct: 727 IRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEAR 786

Query: 518 ILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFI 577
            L  +M    + P+  TY  ++  +  + ++K   R+  ++++        T   L + +
Sbjct: 787 KLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGL 846

Query: 578 FKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTPVSLFDGFVPCERRA 631
            K      A N + EM   G+ PD+             T +SL +G    + RA
Sbjct: 847 CKNGQGDDAENMVKEMVENGITPDD------------STYISLIEGLTTEDERA 888



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 125/278 (44%), Gaps = 10/278 (3%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFD---EMGRFGFTPNT 154
           G+ +T       +   G  +   T+ L +   +   M G   EA++   EMG  G  P+ 
Sbjct: 605 GKLDTALLYRDRMVERGVAMTVATYNLLVHALF---MDGRGTEAYELVEEMGGKGLAPDV 661

Query: 155 FARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGM 210
           F  NI+++   K G V   +++ +           +++   +  L K   V     +   
Sbjct: 662 FTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDE 721

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
            VR+G  P++ ++  L+N     G I  A++++G M     +     +  L+ G   L R
Sbjct: 722 AVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGR 781

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           +D A  L ++M + G  P++VTY +LI G+        A    + + ++G  P L+ +N 
Sbjct: 782 VDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNA 841

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           LI  L K G  DDA ++   ++E  + PD  T+ SL+ 
Sbjct: 842 LIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIE 879



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 52/245 (21%), Positives = 102/245 (41%), Gaps = 4/245 (1%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           + GR      +V E+   G      T+ + +  + +       LE F+ M R G      
Sbjct: 638 MDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVV 697

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
               ++  L K G+V    K+  E       P+ + +N  + +     ++    +++G M
Sbjct: 698 TYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 757

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
            +K   P+   +  L+   C +GR+ EA +L+  M   G    +  +  LI G+     +
Sbjct: 758 EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDV 817

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
             A  +  +M+  G +P ++TY +LI+G  +      A + +  +   G  PD   +  L
Sbjct: 818 KDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISL 877

Query: 332 IDCLS 336
           I+ L+
Sbjct: 878 IEGLT 882


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 108/417 (25%), Positives = 189/417 (45%), Gaps = 10/417 (2%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCK 197
           F EM R G  P+    N +MD L K  R     ++      +   P+ +S++I L     
Sbjct: 365 FKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYAT 424

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
                ++ ++   M   G   +   F IL+N   K G + EA  +   M   G S +V  
Sbjct: 425 EGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVT 484

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF-MEAKMFSIAFSFLDML 316
           +  +I    R+ RL  A     +M+  G  PN V Y SLI+GF     +        +M+
Sbjct: 485 YATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMM 544

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR- 375
           +     P++ F + +I  L   G   +A DV++ ++ +   PD +TF SL+   CL G+ 
Sbjct: 545 DQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKM 604

Query: 376 ---FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
              F +L  +V     E D+V Y+ L++ + K+G  +  + L+  ML K   P   ++  
Sbjct: 605 DKAFGVLDAMVSA-GTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSL 663

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           +L GL  A +   A  ++  ++ +  A++   +T I+  L       +AI LF +     
Sbjct: 664 VLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMN 723

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
              ++      I  L +  R EEA+ L++ +    + PNA TY VM+++  KE +++
Sbjct: 724 LKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVE 780



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 99/497 (19%), Positives = 210/497 (42%), Gaps = 10/497 (2%)

Query: 114 GCVIKAQTFLLFLR-IYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDL 172
           GC     ++ + +  ++  GE+       F+EM + G  PN    N ++  L K   +D 
Sbjct: 267 GCSPDVVSYTMVIHGLFMEGEI-SKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDK 325

Query: 173 GIKVLKE----TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLN 228
              VL++    +  P+ +++   +     L        +   M R+G  P++  F  L++
Sbjct: 326 AELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMD 385

Query: 229 CFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSP 288
             CK  R  EA ++   + T G    + ++++L+ G+    R      L+  M  NG   
Sbjct: 386 SLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVA 445

Query: 289 NVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVY 348
           +   +  LI    +  M   A      +  +G +P++V +  +I  L +MG   DA++  
Sbjct: 446 DSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKL 505

Query: 349 DGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA----DLVVYNALLSYFCK 404
             ++ + L P++  + SL+   C  G      +LV  +  +     ++  +++++   C 
Sbjct: 506 SQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCN 565

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV 464
            G    A  ++N ++  G  PD ++F  L+ G C   K+D+A  V   +V      +   
Sbjct: 566 EGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVT 625

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
           ++ +++   ++GR    + LFR  + ++     V+Y++ + GL   GRT  A  ++ +M 
Sbjct: 626 YSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMI 685

Query: 525 HIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSS 584
                 +  TY ++L   C+         L   +    ++ +      +   ++K     
Sbjct: 686 ESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRRE 745

Query: 585 SAVNQLVEMCNLGLIPD 601
            A +    +   GL+P+
Sbjct: 746 EAHDLFASVSASGLVPN 762



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/469 (21%), Positives = 210/469 (44%), Gaps = 44/469 (9%)

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGR----VDLGIKVLK-ETQLPNFLSFNIALCNLCKLN 199
           M   G  P+ F+ N V+  L    R    +D+ +++ K +   P+ +S+ + +  L    
Sbjct: 227 MSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEG 286

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
           ++S   ++   MV+KG  PNV  +  +++  CK   + +A  +L  M           +T
Sbjct: 287 EISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYT 346

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
            +I G+  L R   A  ++++M + G  P++VT+ SL+    + K    A      + ++
Sbjct: 347 AMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATK 406

Query: 320 GHAPDLV---------------------FH--------------NVLIDCLSKMGSYDDA 344
           GH PD++                     FH              N+LI+  +K G  D+A
Sbjct: 407 GHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEA 466

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS-LLPKL--VCGLEVEADLVVYNALLSY 401
           L ++  +    + P+  T+ ++++ +C  GR +  + KL  +  + ++ + VVY++L+  
Sbjct: 467 LLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQG 526

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFV-GLLRGLCGARKIDEAINVYQGIVMNNPAV 460
           FC  G   +A +L + M+D+G    N +F   ++  LC   ++  A +V+  ++      
Sbjct: 527 FCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRP 586

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
           +     +++D     G+  KA  +    +      DVV+Y+  I G  + GR ++  IL+
Sbjct: 587 DIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILF 646

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
            +M    V P   TY ++L    +       K++  ++I++   +   T
Sbjct: 647 REMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSIST 695



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 108/444 (24%), Positives = 190/444 (42%), Gaps = 10/444 (2%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR++    +  E+ R G +    TF   +    + +      E F  +   G  P+  + 
Sbjct: 356 GRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISY 415

Query: 158 NIVMDVLFKIGR-VDLGIKVLKETQ---LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           +I++      GR VD+       T    + +   FNI +    K   +     +   M  
Sbjct: 416 SILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRG 475

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +G  PNV  +  ++   C+MGR+A+A + L  MI++G   +   +  LI GF     L  
Sbjct: 476 QGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIK 535

Query: 274 AGYLWEKMVQNGCS-PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
           A  L  +M+  G   PN+  ++S+I           A    +++   G  PD+   N LI
Sbjct: 536 AKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLI 595

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLVCGLEV 388
           D    +G  D A  V D ++     PD  T+ +L++    SGR      L  +++C   V
Sbjct: 596 DGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCK-RV 654

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
           +   V Y+ +L    +AG  + A K+++ M++ G      ++  +L+GLC     DEAI 
Sbjct: 655 KPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAIT 714

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           ++  +   N      +   ++  L +  R  +A  LF          +  +Y V I  LL
Sbjct: 715 LFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLL 774

Query: 509 EGGRTEEAYILYSQMKHIAVPPNA 532
           + G  EEA I++S M+     P++
Sbjct: 775 KEGSVEEADIMFSSMEKTGCAPSS 798



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/306 (22%), Positives = 137/306 (44%), Gaps = 10/306 (3%)

Query: 273 MAGYLWEKMVQNGCSPNVV-----TYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
           +A  L+ ++ +    P VV     TY  L+     A+   +  +F   L   G   D + 
Sbjct: 143 LAVALFNRICREEAGPRVVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIV 202

Query: 328 HNVLIDCLSKMGSYDDALD-VYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKL 382
            N  + CL      D+AL  +   + EL  VPD++++ +++ ++C   R      +L ++
Sbjct: 203 TNTFLKCLCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRM 262

Query: 383 VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
             G     D+V Y  ++      G  ++A  L+N M+ KG  P+  ++  ++  LC AR 
Sbjct: 263 TKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARA 322

Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTV 502
           +D+A  V + +  N+   +   +TA++      GR  +A ++F+    E    D+V++  
Sbjct: 323 MDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNS 382

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
            +  L +  R++EA  ++  +      P+  +Y ++L  +  E     +  L   + D  
Sbjct: 383 LMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNG 442

Query: 563 IELDYH 568
           I  D H
Sbjct: 443 IVADSH 448



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 87/453 (19%), Positives = 182/453 (40%), Gaps = 82/453 (18%)

Query: 78  DYFHDVQSFDHMISVVT--------RLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIY 129
           + FH + +  H   +++           GRF  +  +   +   G V  +  F + +  +
Sbjct: 398 EIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAH 457

Query: 130 WRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR-----------VDLGIK--- 175
            +  M    L  F EM   G +PN      V+  L ++GR           + +G+K   
Sbjct: 458 AKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNT 517

Query: 176 ---------------VLKETQL-----------PNFLSFNIALCNLCKLNDVSNVKDVIG 209
                          ++K  +L           PN   F+  + +LC    V N +DV  
Sbjct: 518 VVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFN 577

Query: 210 MMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLR 269
           +++  G  P++  F  L++ +C +G++ +A+ +L  M++ GT   V  ++ LI+G+ +  
Sbjct: 578 LVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSG 637

Query: 270 RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS-FLDMLESEGHAPDLVFH 328
           R+D    L+ +M+     P  VTY+ ++ G   A   S A   F +M+ES G A  +  +
Sbjct: 638 RIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIES-GTAMSISTY 696

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV 388
            +++  L +    D+A+ ++  L  + L                                
Sbjct: 697 TIILQGLCRNNCTDEAITLFHKLGAMNL-------------------------------- 724

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
           + ++ + N ++    K     +A  L+ ++   G  P+  ++  ++  L     ++EA  
Sbjct: 725 KFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADI 784

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
           ++  +     A ++ +   I+  L++ G   KA
Sbjct: 785 MFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKA 817



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 104/252 (41%), Gaps = 39/252 (15%)

Query: 355 KLVPDS-YTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQ 410
           ++VP + +T+  L+   C + R  L P     L    +  D +V N  L   C A   ++
Sbjct: 159 RVVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDE 218

Query: 411 AVK-LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
           A+  L + M + G  PD +S+  +++ LCG  +  EA++                   ++
Sbjct: 219 ALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALD-------------------ML 259

Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
            R+ +   C                 DVVSYT+ I GL   G   +A  L+++M    V 
Sbjct: 260 LRMTKGDGCSP---------------DVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVV 304

Query: 530 PNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQ 589
           PN  TY  ++ + CK R +   + +L+ + D  I+ D  T   +            A   
Sbjct: 305 PNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKM 364

Query: 590 LVEMCNLGLIPD 601
             EM   GLIPD
Sbjct: 365 FKEMTREGLIPD 376



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 51/286 (17%), Positives = 112/286 (39%), Gaps = 14/286 (4%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D+ +F+ +I     L G+ +   G++  +   G      T+   +  Y++       L  
Sbjct: 587 DIFTFNSLIDGYC-LVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLIL 645

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET----QLPNFLSFNIALCNLCK 197
           F EM      P T   ++V+D LF+ GR     K+  E        +  ++ I L  LC+
Sbjct: 646 FREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCR 705

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            N       +   +        + +   +++   K+ R  EA+ L   +   G   + + 
Sbjct: 706 NNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNAST 765

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           + V+I    +   ++ A  ++  M + GC+P+      +I+  ++      A  ++  ++
Sbjct: 766 YGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKAGYYMSKVD 825

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
               + +    ++LI   +  G Y +         ++K +P  Y F
Sbjct: 826 GTIISLEASTTSLLISLFASKGRYRE---------QIKFLPAKYQF 862


>gi|110289270|gb|ABG66143.1| expressed protein [Oryza sativa Japonica Group]
 gi|125575153|gb|EAZ16437.1| hypothetical protein OsJ_31906 [Oryza sativa Japonica Group]
          Length = 829

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 117/461 (25%), Positives = 213/461 (46%), Gaps = 44/461 (9%)

Query: 134 MYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-----PNFLSF 188
           M  + LE F+EM   G +P+ ++ +I+++ L K  +V   +  L+E +      P  ++F
Sbjct: 216 MTDVALELFEEMESCGVSPSEYSHSIIINGLCKQDKVGEALSFLQEARKEGKFKPLGMTF 275

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           NI +  LC    V + K  + +M++ G  P+   F  L++  CK+G + EA  L   +  
Sbjct: 276 NILMSALCNWGFVQSAKSFLCLMLKYGLVPDRYTFSTLIHGLCKVGSMEEALDLFERVTK 335

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
            G  L +  +  LI+G+R L        + + M   G  P++VTYT LI G  E+     
Sbjct: 336 EGMELEIVTYNSLINGYRLLGLTKEIPKIIQMMRGQGVEPDLVTYTILIAGHCESGDVEE 395

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY---DDAL-DVYDGLLELKLVPDS---Y 361
                  +  +G   ++V ++VL++ L K G +   D+ L ++Y+  L++ ++  S   +
Sbjct: 396 GMKVRKDVLDQGLQLNIVTYSVLLNALFKKGMFCEIDNLLGEIYNIGLDMDVIAYSILIH 455

Query: 362 TFCSL---------LSTVCLSGR--------FSLLPKLVCGLE-VEA------------- 390
            +C L          + +C S R        FS+L  L      VEA             
Sbjct: 456 GYCKLGEIEKALQVCNAMCSSQRVMPTSLNHFSILLGLCKKGLLVEARWYLENVARKYQP 515

Query: 391 -DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            D+V YN ++  + K G    AV+LY+ +   G  P   +   LL G C    +  A + 
Sbjct: 516 TDVVFYNVVIDGYAKLGDIVNAVRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESY 575

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
           ++ I ++     A  +T ++D L EAG  +  + LF   + ++   + V+Y+V ++GL +
Sbjct: 576 FRAIQLSGLLPTAVTYTTLMDALSEAGEVNTMLSLFDEMVAKRIKANAVTYSVIVKGLCK 635

Query: 510 GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
             R +EA  +   M    +  +  TY  ++  FC+  N++M
Sbjct: 636 QLRFDEAINVLKDMDSKGINADPITYNTLIQGFCESENVQM 676



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 92/434 (21%), Positives = 193/434 (44%), Gaps = 45/434 (10%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKET-----QLPNFLSFNIALCNLCKLNDVSN 203
           G  P+     I++    + G V+ G+KV K+      QL N +++++ L  L K      
Sbjct: 372 GVEPDLVTYTILIAGHCESGDVEEGMKVRKDVLDQGLQL-NIVTYSVLLNALFKKGMFCE 430

Query: 204 VKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT----LGTSLS----- 254
           + +++G +   G   +V  + IL++ +CK+G I +A Q+   M +    + TSL+     
Sbjct: 431 IDNLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQVCNAMCSSQRVMPTSLNHFSIL 490

Query: 255 ---------------------------VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCS 287
                                      V  + V+IDG+ +L  +  A  L++++   G  
Sbjct: 491 LGLCKKGLLVEARWYLENVARKYQPTDVVFYNVVIDGYAKLGDIVNAVRLYDQITVAGMH 550

Query: 288 PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
           P +VT  SL+ G+ +     +A S+   ++  G  P  V +  L+D LS+ G  +  L +
Sbjct: 551 PTIVTCNSLLYGYCKIGDLQLAESYFRAIQLSGLLPTAVTYTTLMDALSEAGEVNTMLSL 610

Query: 348 YDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCK 404
           +D ++  ++  ++ T+  ++  +C   RF     ++  ++   + AD + YN L+  FC+
Sbjct: 611 FDEMVAKRIKANAVTYSVIVKGLCKQLRFDEAINVLKDMDSKGINADPITYNTLIQGFCE 670

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV 464
           +     A  +++ ML +G  P   ++  L+  LC   K+ +A  + + +  N   +    
Sbjct: 671 SENVQMAFHIHDIMLCRGLVPTPVTYNLLINVLCLKGKVIQAEILLESLRENGIKLRKFA 730

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
           +T ++      G    A+ L  + +   +   +  ++ AI  L +    +EA++    M 
Sbjct: 731 YTTLIKAQCAKGMPINAVLLVGKLLDAGFEASIEDFSAAINRLCKRQFAKEAFMFVPIML 790

Query: 525 HIAVPPNAYTYRVM 538
            + + P+   Y V+
Sbjct: 791 SVGIYPDTQIYCVL 804



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 83/344 (24%), Positives = 134/344 (38%), Gaps = 69/344 (20%)

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           W  L + + R + +  A Y+  KM       +V TY SL+ G    +M  +A    + +E
Sbjct: 172 WDALANSYARAQMVHDALYVLSKMSSLNMQISVFTYDSLLHGL---RMTDVALELFEEME 228

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
           S G +P    H+++I+ L K     +AL                   S L      G+F 
Sbjct: 229 SCGVSPSEYSHSIIINGLCKQDKVGEAL-------------------SFLQEARKEGKFK 269

Query: 378 LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
            L             + +N L+S  C  GF   A      ML  G  PD Y+F  L+ GL
Sbjct: 270 PLG------------MTFNILMSALCNWGFVQSAKSFLCLMLKYGLVPDRYTFSTLIHGL 317

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
           C    ++EA++                                   LF R   E   L++
Sbjct: 318 CKVGSMEEALD-----------------------------------LFERVTKEGMELEI 342

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
           V+Y   I G    G T+E   +   M+   V P+  TY +++   C+  +++   ++ +D
Sbjct: 343 VTYNSLINGYRLLGLTKEIPKIIQMMRGQGVEPDLVTYTILIAGHCESGDVEEGMKVRKD 402

Query: 558 VIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           V+D  ++L+  T   L   +FK        N L E+ N+GL  D
Sbjct: 403 VLDQGLQLNIVTYSVLLNALFKKGMFCEIDNLLGEIYNIGLDMD 446



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 127/606 (20%), Positives = 247/606 (40%), Gaps = 105/606 (17%)

Query: 54  HSTLLN--CPSDLI--ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGE 109
           HS ++N  C  D +  ALSF     K+  +     +F+ ++S +    G  ++ +  +  
Sbjct: 239 HSIIINGLCKQDKVGEALSFLQEARKEGKFKPLGMTFNILMSALCNW-GFVQSAKSFLCL 297

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
           + + G V    TF   +    +       L+ F+ + + G        N +++    +G 
Sbjct: 298 MLKYGLVPDRYTFSTLIHGLCKVGSMEEALDLFERVTKEGMELEIVTYNSLINGYRLLGL 357

Query: 170 VDLGIKVLK----ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK-----GFYPNV 220
                K+++    +   P+ +++ I +   C+  DV       GM VRK     G   N+
Sbjct: 358 TKEIPKIIQMMRGQGVEPDLVTYTILIAGHCESGDVEE-----GMKVRKDVLDQGLQLNI 412

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
             + +LLN   K G   E   LLG +  +G  + V A+++LI G+ +L  ++ A  +   
Sbjct: 413 VTYSVLLNALFKKGMFCEIDNLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQVCNA 472

Query: 281 MVQNG-CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
           M  +    P  + + S++ G  +  +   A  +L+ +  +    D+VF+NV+ID  +K+G
Sbjct: 473 MCSSQRVMPTSLNHFSILLGLCKKGLLVEARWYLENVARKYQPTDVVFYNVVIDGYAKLG 532

Query: 340 SYDDALDVYD------------------------GLLELK-----------LVPDSYTFC 364
              +A+ +YD                        G L+L            L+P + T+ 
Sbjct: 533 DIVNAVRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESYFRAIQLSGLLPTAVTYT 592

Query: 365 SLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
           +L+  +  +G      SL  ++V    ++A+ V Y+ ++   CK    ++A+ +   M  
Sbjct: 593 TLMDALSEAGEVNTMLSLFDEMVAK-RIKANAVTYSVIVKGLCKQLRFDEAINVLKDMDS 651

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
           KG   D  ++  L++G C +  +  A                H+H               
Sbjct: 652 KGINADPITYNTLIQGFCESENVQMAF---------------HIHD-------------- 682

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
            I L R  +        V+Y + I  L   G+  +A IL   ++   +    + Y  ++ 
Sbjct: 683 -IMLCRGLVPTP-----VTYNLLINVLCLKGKVIQAEILLESLRENGIKLRKFAYTTLIK 736

Query: 541 SFCKE----RNIKMVKRLLQDVIDARIELDYHTSI-RLTKFIFKFHSSSSAVNQLVEMCN 595
           + C +      + +V +LL    +A IE D+  +I RL K  F    +  A   +  M +
Sbjct: 737 AQCAKGMPINAVLLVGKLLDAGFEASIE-DFSAAINRLCKRQF----AKEAFMFVPIMLS 791

Query: 596 LGLIPD 601
           +G+ PD
Sbjct: 792 VGIYPD 797



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/287 (22%), Positives = 122/287 (42%), Gaps = 7/287 (2%)

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N+V+D   K+G +   +++  +  +    P  ++ N  L   CK+ D+   +     +  
Sbjct: 522 NVVIDGYAKLGDIVNAVRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESYFRAIQL 581

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G  P    +  L++   + G +     L   M+      +   ++V++ G  +  R D 
Sbjct: 582 SGLLPTAVTYTTLMDALSEAGEVNTMLSLFDEMVAKRIKANAVTYSVIVKGLCKQLRFDE 641

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  + + M   G + + +TY +LI+GF E++   +AF   D++   G  P  V +N+LI+
Sbjct: 642 AINVLKDMDSKGINADPITYNTLIQGFCESENVQMAFHIHDIMLCRGLVPTPVTYNLLIN 701

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG---RFSLLPKLVCGLEVEA 390
            L   G    A  + + L E  +    + + +L+   C  G      LL   +     EA
Sbjct: 702 VLCLKGKVIQAEILLESLRENGIKLRKFAYTTLIKAQCAKGMPINAVLLVGKLLDAGFEA 761

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
            +  ++A ++  CK  F  +A      ML  G  PD   +  L R L
Sbjct: 762 SIEDFSAAINRLCKRQFAKEAFMFVPIMLSVGIYPDTQIYCVLGRAL 808



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 5/210 (2%)

Query: 132 GEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF----LS 187
           GE+  M L  FDEM       N    ++++  L K  R D  I VLK+          ++
Sbjct: 602 GEVNTM-LSLFDEMVAKRIKANAVTYSVIVKGLCKQLRFDEAINVLKDMDSKGINADPIT 660

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           +N  +   C+  +V     +  +M+ +G  P    + +L+N  C  G++ +A  LL  + 
Sbjct: 661 YNTLIQGFCESENVQMAFHIHDIMLCRGLVPTPVTYNLLINVLCLKGKVIQAEILLESLR 720

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
             G  L   A+T LI           A  L  K++  G   ++  +++ I    + +   
Sbjct: 721 ENGIKLRKFAYTTLIKAQCAKGMPINAVLLVGKLLDAGFEASIEDFSAAINRLCKRQFAK 780

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
            AF F+ ++ S G  PD   + VL   L K
Sbjct: 781 EAFMFVPIMLSVGIYPDTQIYCVLGRALQK 810


>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Brachypodium distachyon]
          Length = 938

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/424 (23%), Positives = 197/424 (46%), Gaps = 10/424 (2%)

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQLP----NFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N ++D   K+G ++    V +  +      + + +N  +  LC+  +V   +D++  M R
Sbjct: 178 NSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKR 237

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
            G  PNV  + + +  +C+   + +A+ L   M+  G    V   + L+ G  +  R   
Sbjct: 238 DGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSE 297

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L+ +M + G +PN VTY  LI    +A+  + + S L  + S G   DL+ +  L+D
Sbjct: 298 AYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMD 357

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEA 390
            L K G  D+A D++   L     P+  T+  L+  +C +G      +++  +E   +  
Sbjct: 358 WLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISP 417

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           ++V ++++++   K G+  +A      M ++G  P+  ++  ++ G       + A++VY
Sbjct: 418 NVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVY 477

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
             ++     VN  +  ++V+ L + G+  KA  LFR        LD V+YT  I GL + 
Sbjct: 478 HEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKT 537

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD---Y 567
           G    A+ +  ++    + P+A  Y V +   C     K  +  L+++    ++ D   Y
Sbjct: 538 GNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTY 597

Query: 568 HTSI 571
           +T I
Sbjct: 598 NTMI 601



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 119/545 (21%), Positives = 221/545 (40%), Gaps = 42/545 (7%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GRF     +  E+ ++G      T+ + +    + +     L    E+   G   +    
Sbjct: 293 GRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMY 352

Query: 158 NIVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
             +MD L K G++D    +    L +   PN +++ + +  LCK  +V   + V+  M  
Sbjct: 353 TALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEE 412

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM---------ITLGT------------- 251
           K   PNV  F  ++N   K G + +A   +  M         +T GT             
Sbjct: 413 KSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEA 472

Query: 252 -----------SLSVNAWTV--LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIK 298
                       + VN + V  L++G ++  +++ A  L+ +M + G   + V YT+LI 
Sbjct: 473 ALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLID 532

Query: 299 GFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP 358
           G  +      AF     L  +   PD V +NV I+CL  +G   +A    + +    L P
Sbjct: 533 GLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKP 592

Query: 359 DSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLY 415
           D  T+ ++++     G+ +   KL+ G++   ++ +L+ Y+ L+    +AG   +A  L 
Sbjct: 593 DQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLL 652

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
           N M   GF+P + +   +L+     R+ D  + +++ ++      +  V+  +V  L   
Sbjct: 653 NEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYN 712

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
           G   KA+ +           D +++   I G  + G  + A+  Y QM +  + PN  T+
Sbjct: 713 GMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATF 772

Query: 536 RVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCN 595
             +L        I     +L ++    IE    T   L     K  +   AV    EM  
Sbjct: 773 NTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVG 832

Query: 596 LGLIP 600
            G +P
Sbjct: 833 KGFLP 837



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 95/428 (22%), Positives = 195/428 (45%), Gaps = 7/428 (1%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALC 193
            L+ + EM   G   N F  + +++ L K G+++    + +E      L + +++   + 
Sbjct: 473 ALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLID 532

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
            L K  ++     V   +  K   P+  ++ + +NC C +G+  EA   L  M + G   
Sbjct: 533 GLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKP 592

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
               +  +I    R  +   A  L   M ++   PN++TY++LI G  EA     A   L
Sbjct: 593 DQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLL 652

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           + + S G +P  + H  ++   S+    D  L++++ ++   L  D   + +L+  +C +
Sbjct: 653 NEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYN 712

Query: 374 G---RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           G   +  ++ + + G  +  D + +NAL+    K+G  + A   Y+ ML  G +P+  +F
Sbjct: 713 GMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATF 772

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             LL GL  A +I E+  V   +       +   +  +V    +     +A++L+   + 
Sbjct: 773 NTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVG 832

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
           + +   V +Y   I    + G   +A  L+++M++  V P + TY +++  + K RN   
Sbjct: 833 KGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTE 892

Query: 551 VKRLLQDV 558
           V++ L+D+
Sbjct: 893 VRKFLKDM 900



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 118/564 (20%), Positives = 226/564 (40%), Gaps = 82/564 (14%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV  ++ +++ + R  G  +  R +V  + R G      T+ +F+  Y R          
Sbjct: 208 DVVGYNSLVAGLCR-AGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSL 266

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           ++EM R G  P+    + ++  L K GR      + +E +     PN +++ + +  L K
Sbjct: 267 YEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAK 326

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
               +    ++G +V +G   ++ M+  L++  CK G+I EA  +    ++   + +   
Sbjct: 327 AQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVT 386

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +TVLID   +   +D A  +  +M +   SPNVVT++S+I G ++      A  ++  ++
Sbjct: 387 YTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMK 446

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL------------------------- 352
             G  P++V +  +ID   K    + ALDVY  +L                         
Sbjct: 447 ERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIE 506

Query: 353 ----------ELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE-----ADLVVYNA 397
                     E  ++ D   + +L+  +  +G      K+  G E+       D VVYN 
Sbjct: 507 KAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKV--GQELTEKNLLPDAVVYNV 564

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
            ++  C  G   +A      M   G  PD  ++                           
Sbjct: 565 FINCLCMLGKSKEAESFLEEMQSTGLKPDQVTY--------------------------- 597

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAY 517
                  +T I  +  E G+  KA++L           ++++Y+  I GL E G  E+A 
Sbjct: 598 -------NTMIAAQSRE-GKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAK 649

Query: 518 ILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFI 577
            L ++M      P + T+R +L +  + R   ++  + + +++A +  D      L + +
Sbjct: 650 YLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVL 709

Query: 578 FKFHSSSSAVNQLVEMCNLGLIPD 601
                +  A+  L EM   G+ PD
Sbjct: 710 CYNGMTRKAMVVLEEMSGRGIAPD 733



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/382 (23%), Positives = 168/382 (43%), Gaps = 37/382 (9%)

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSL-SVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
           + ++++ F + G +A    LL  M   G    +V   TVL+ G  R  R+D A  L E M
Sbjct: 106 YNVVMSGFSEQGGLAPE-ALLAEMCKRGVPFDAVTVNTVLV-GLCRDGRVDRAAALAEVM 163

Query: 282 VQNGC--SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
           V+ G     +VV + SL+ G+ +      AF+  + ++++G   D+V +N L+  L + G
Sbjct: 164 VRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAG 223

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALL 399
             D A D+ D                   T+   G             VE ++V Y   +
Sbjct: 224 EVDAARDMVD-------------------TMKRDG-------------VEPNVVTYTMFI 251

Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
             +C+    + A  LY  M+ KG  PD  +   L+ GLC   +  EA  +++ +     A
Sbjct: 252 VEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAA 311

Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
            N   +  ++D L +A R ++++ L    +     +D++ YT  +  L + G+ +EA  +
Sbjct: 312 PNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDM 371

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK 579
           +         PN  TY V++ + CK  N+   +++L ++ +  I  +  T   +   + K
Sbjct: 372 FRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVK 431

Query: 580 FHSSSSAVNQLVEMCNLGLIPD 601
                 A + + EM   G+ P+
Sbjct: 432 RGWVGKATDYMREMKERGIDPN 453



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/354 (20%), Positives = 142/354 (40%), Gaps = 40/354 (11%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G+ +     + E+   G      T+   +    R       L+  + M R    PN    
Sbjct: 573 GKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITY 632

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIA------LCNLCKLNDVSNVKDVIGMM 211
           + ++  LF+ G V+    +L E     F   ++        C+  + +D+  + ++   M
Sbjct: 633 STLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDL--ILEIHEWM 690

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
           +  G   ++ ++  L+   C  G   +A  +L  M   G +     +  LI G  +   L
Sbjct: 691 MNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHL 750

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           D A   +++M+ +G SPNV T+ +L+ G   A     +   L+ ++  G  P  + +++L
Sbjct: 751 DNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDIL 810

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEAD 391
           +    K  +  +A+ +Y               C ++           LPK          
Sbjct: 811 VTGYGKQSNKVEAVRLY---------------CEMVGK-------GFLPK---------- 838

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
           +  YNAL+S F K G  +QA +L+N M ++G  P + ++  L+ G    R   E
Sbjct: 839 VSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTE 892



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/274 (23%), Positives = 111/274 (40%), Gaps = 4/274 (1%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
            G  E  + ++ E++  G    + T    L+   +G    ++LE  + M   G   +   
Sbjct: 642 AGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITV 701

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N ++ VL   G     + VL+E       P+ ++FN  +    K   + N       M+
Sbjct: 702 YNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQML 761

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
             G  PNV  F  LL      GRI E+  +L  M   G   S   + +L+ G+ +     
Sbjct: 762 YHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKV 821

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A  L+ +MV  G  P V TY +LI  F +  M S A    + +++ G  P    +++L+
Sbjct: 822 EAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILV 881

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
              SK+ +  +       + E    P   T  S+
Sbjct: 882 SGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSI 915



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/204 (23%), Positives = 91/204 (44%), Gaps = 4/204 (1%)

Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           ++ E++  G      TF   +  +++          +D+M   G +PN    N ++  L 
Sbjct: 721 VLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLE 780

Query: 166 KIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
             GR+     VL E +     P+ L+++I +    K ++      +   MV KGF P V 
Sbjct: 781 SAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVS 840

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            +  L++ F K+G +++A +L   M   G   +   + +L+ G+ +LR         + M
Sbjct: 841 TYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDM 900

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKM 305
            + G SP+  T +S+ + F +  M
Sbjct: 901 KEKGFSPSKGTLSSISRAFSKPGM 924



 Score = 41.2 bits (95), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 36/166 (21%), Positives = 69/166 (41%), Gaps = 5/166 (3%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           +V +F+ ++  +    GR      ++ E+ + G      T+ + +  Y +       +  
Sbjct: 768 NVATFNTLLGGLES-AGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRL 826

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           + EM   GF P     N ++    K+G +    ++  E Q    LP   +++I +    K
Sbjct: 827 YCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSK 886

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
           L + + V+  +  M  KGF P+      +   F K G   EA +LL
Sbjct: 887 LRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLL 932


>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Glycine max]
          Length = 682

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 124/559 (22%), Positives = 229/559 (40%), Gaps = 43/559 (7%)

Query: 43  DFPIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFET 102
           + P  L+PH +   L    S L AL+ F    ++  +      F H++  V    G    
Sbjct: 3   ELPKSLSPHRLLKLLKAEKSPLSALNVFDAAVRRPGFSPSSAVFHHILRRVAADPGLLLA 62

Query: 103 VRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGR-FGFTPNTFARNIVM 161
               +  +A + C       L  L+ Y +  M    L  F  M   FG +P   + N ++
Sbjct: 63  HAPRI--IAAIHCPCPEDVPLTLLKAYAKTRMPNEALHVFQTMPHVFGCSPTIRSFNTLL 120

Query: 162 DVL---FKIGRVDLGIKVLKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFY 217
           +      +  R +   K  +  ++ PN  ++N+ +  +CK  +    + ++  M   G  
Sbjct: 121 NAFVESHQWARAENFFKYFEAARVSPNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMS 180

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
           P+   +  L+    K G +  A ++   M   G    V  + ++IDGF +      AG +
Sbjct: 181 PDRITYGTLIGGVAKSGDLGFALEVFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEM 240

Query: 278 WEKMVQNGCS-PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           WE++++     P+VV+Y  +I G  +   FS      + ++      DL  ++ LI  LS
Sbjct: 241 WERLLREELVFPSVVSYNVMISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLS 300

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKL-VCGLE---- 387
           + G    A  VY+ ++   + PD  T  ++L+ +C +G     F L  ++  C L     
Sbjct: 301 EAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSLRNVRS 360

Query: 388 ------------------------VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK-- 421
                                   +EAD   Y  ++   C  G+ N+A+++      +  
Sbjct: 361 YNIFLKGLFENGKVDDAMMLWDGLLEADSATYGVVVHGLCWNGYVNRALQVLEEAEHREG 420

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
           G   D +++  L+  LC   ++DEA  V + +       N+HV   ++D  ++  +   A
Sbjct: 421 GMDVDEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSA 480

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
           +++FR    +   L VVSY + I GLL   R  EAY   ++M      P+  TY  ++  
Sbjct: 481 VKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGG 540

Query: 542 FCKERNIKMVKRLLQDVID 560
             +   +    RL    +D
Sbjct: 541 LYESNMMDAALRLWHQFLD 559



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 111/501 (22%), Positives = 220/501 (43%), Gaps = 29/501 (5%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           +V++++ ++ V+ +  G FE  RG++  +   G      T+   +    +    G  LE 
Sbjct: 147 NVETYNVLMKVMCK-KGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGFALEV 205

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQL-PNFLSFNIALCNLC 196
           FDEM   G  P+    N+++D  FK G      ++  ++L+E  + P+ +S+N+ +  LC
Sbjct: 206 FDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFPSVVSYNVMISGLC 265

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
           K    S   ++   M +     ++  +  L++   + G +  A ++   M+  G    V 
Sbjct: 266 KCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVV 325

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCS-PNVVTYTSLIKGFMEAKMFSIAFSFLD- 314
               +++G  +   ++    LWE+M +  CS  NV +Y   +KG  E      A    D 
Sbjct: 326 TCNAMLNGLCKAGNVEECFELWEEMGK--CSLRNVRSYNIFLKGLFENGKVDDAMMLWDG 383

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGL--LELKLVPDSYTFCSLLSTVCL 372
           +LE++     +V H +  +     G  + AL V +     E  +  D + + SL++ +C 
Sbjct: 384 LLEADSATYGVVVHGLCWN-----GYVNRALQVLEEAEHREGGMDVDEFAYSSLINALCK 438

Query: 373 SGRF-------SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
            GR         L+ K  C         V N L+  F K    + AVK++  M  KG + 
Sbjct: 439 EGRLDEADGVVELMNKRGCKFNSH----VCNVLIDGFVKHSKLDSAVKVFREMSGKGCSL 494

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
              S+  L+ GL  A +  EA +    ++      +   ++ ++  L E+     A++L+
Sbjct: 495 TVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAALRLW 554

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
            + +   +  D++ Y + I  L   G+ E+A  LYS ++      N  T+  ++  F K 
Sbjct: 555 HQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKC-VNLVTHNTIMEGFYKV 613

Query: 546 RNIKMVKRLLQDVIDARIELD 566
            N +M  ++   +++  ++ D
Sbjct: 614 GNCEMASKIWAHILEDELQPD 634



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 133/279 (47%), Gaps = 10/279 (3%)

Query: 168 GRVDLGIKVLKETQLP------NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
           G V+  ++VL+E +        +  +++  +  LCK   +     V+ +M ++G   N  
Sbjct: 403 GYVNRALQVLEEAEHREGGMDVDEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSH 462

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
           +  +L++ F K  ++  A ++   M   G SL+V ++ +LI+G  R  R   A     +M
Sbjct: 463 VCNVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEM 522

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
           ++ G  P+++TY++LI G  E+ M   A          GH PD++ +N++I  L   G  
Sbjct: 523 LEKGWKPDIITYSTLIGGLYESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKV 582

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNAL 398
           +DAL +Y  L + K V +  T  +++      G   +  K+   +   E++ D++ YN  
Sbjct: 583 EDALQLYSTLRQKKCV-NLVTHNTIMEGFYKVGNCEMASKIWAHILEDELQPDIISYNIT 641

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
           L   C  G    AV   +  L +GF P   ++  L+R +
Sbjct: 642 LKGLCSCGRVTDAVGFLDDALVRGFLPTAITWNILVRAV 680



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/238 (21%), Positives = 104/238 (43%), Gaps = 21/238 (8%)

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
           V  ++  YN L+   CK G   +   L   M   G +PD  ++  L+ G+  +  +  A+
Sbjct: 144 VSPNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGFAL 203

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK--YPLDVVSYTVAIR 505
            V+  +       +   +  I+D   + G   KA +++ R + E+  +P  VVSY V I 
Sbjct: 204 EVFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFP-SVVSYNVMIS 262

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
           GL + GR  E   ++ +MK      + +TY  ++    +  ++   +++ ++++   +  
Sbjct: 263 GLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVRP 322

Query: 566 DYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD--EMWRKLGLLSDETMTPVSLF 621
           D  T              ++ +N L   C  G + +  E+W ++G  S   +   ++F
Sbjct: 323 DVVT-------------CNAMLNGL---CKAGNVEECFELWEEMGKCSLRNVRSYNIF 364


>gi|224118166|ref|XP_002317747.1| predicted protein [Populus trichocarpa]
 gi|222858420|gb|EEE95967.1| predicted protein [Populus trichocarpa]
          Length = 498

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 113/455 (24%), Positives = 202/455 (44%), Gaps = 17/455 (3%)

Query: 33  SPKVCATTHQDFPIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYF-HDVQSFDHMIS 91
           +P +     + +P  L   I H   L+     +A   F +  K    F H   ++  +I 
Sbjct: 3   TPPIKPWPQRLYPKRLISMITHQENLD-----LAFQIFDYAGKYHPGFSHTYDTYHSIID 57

Query: 92  VVTRLTGRFETVRGIVGELARVGCVIKA--QTFLLFLRIYWRGEMYGMVLEAFDEMGR-F 148
            ++R    F+ V  ++ +L+R    IK     F+  +R Y       + L+ F  +   F
Sbjct: 58  KLSRARA-FDGVESLLSQLSRNSSHIKCGDDVFISVIRNYGLAGRPRLALKTFTRIKEEF 116

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ-----LPNFLSFNIALCNLCKLNDVSN 203
              P+    N +++V  +  R  L    LK  +     LPN  SFNI +  LCK NDV N
Sbjct: 117 SMQPSVKLLNTLLNVFVQNKRYHLVGSTLKNCKDKYGVLPNVFSFNILIKALCKKNDVEN 176

Query: 204 VKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLID 263
              V   M   G  PN+  +  +L  F   G +  A ++   +   G       +TVL+ 
Sbjct: 177 ALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNAEKVFSEISDKGWLPDATTYTVLMV 236

Query: 264 GFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP 323
           G+ +  RL  A  + + M  NG  PN VTY  +I  + + K    A + +D +  +   P
Sbjct: 237 GYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDAYCKEKKSGEARNLIDDMLDKKFLP 296

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV 383
                  +ID L + G  ++A  ++  +LE   +PD+    +L+  +C  G+     KL 
Sbjct: 297 SSTLCCKVIDVLCEDGKVENACHLWKRMLEKNCLPDNAIMSTLIHWLCKEGKVWEARKLF 356

Query: 384 CGLEVEA--DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
              E      L+ YN L++  C+ G  N+A +L++ M++K   P+ +++  L++G   A 
Sbjct: 357 DEFEQGTIPSLMTYNTLIAGMCERGELNEAGRLWDDMVEKRCRPNAFTYNMLIKGFMKAG 416

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
            + E + + + ++ N    N   +T +++ L E+G
Sbjct: 417 VVKEGVRILEEMLDNGCLPNKSTYTLLIEGLQESG 451



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 71/320 (22%), Positives = 142/320 (44%), Gaps = 5/320 (1%)

Query: 287 SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE-GHAPDLVFHNVLIDCLSKMGSYDDAL 345
            P+V    +L+  F++ K + +  S L   + + G  P++   N+LI  L K    ++AL
Sbjct: 119 QPSVKLLNTLLNVFVQNKRYHLVGSTLKNCKDKYGVLPNVFSFNILIKALCKKNDVENAL 178

Query: 346 DVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYF 402
            V+D +  + ++P+  T+ ++L      G      K+   +  +    D   Y  L+  +
Sbjct: 179 KVFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNAEKVFSEISDKGWLPDATTYTVLMVGY 238

Query: 403 CKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNA 462
           CK G  + A+K+ + M   G  P+  ++  ++   C  +K  EA N+   ++      ++
Sbjct: 239 CKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDAYCKEKKSGEARNLIDDMLDKKFLPSS 298

Query: 463 HVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQ 522
            +   ++D L E G+   A  L++R + +    D    +  I  L + G+  EA  L+ +
Sbjct: 299 TLCCKVIDVLCEDGKVENACHLWKRMLEKNCLPDNAIMSTLIHWLCKEGKVWEARKLFDE 358

Query: 523 MKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHS 582
            +   + P+  TY  ++   C+   +    RL  D+++ R   +  T   L K   K   
Sbjct: 359 FEQGTI-PSLMTYNTLIAGMCERGELNEAGRLWDDMVEKRCRPNAFTYNMLIKGFMKAGV 417

Query: 583 SSSAVNQLVEMCNLGLIPDE 602
               V  L EM + G +P++
Sbjct: 418 VKEGVRILEEMLDNGCLPNK 437



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 82/318 (25%), Positives = 131/318 (41%), Gaps = 26/318 (8%)

Query: 51  HIVHSTLLNCPSDLIAL----SFFIWCA---KQRDYFHDVQSFDHMIS------VVTRLT 97
           H+V STL NC      L    SF I      K+ D  + ++ FD M +      +VT  T
Sbjct: 139 HLVGSTLKNCKDKYGVLPNVFSFNILIKALCKKNDVENALKVFDEMPTMGMIPNLVTYTT 198

Query: 98  --------GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFG 149
                   G       +  E++  G +  A T+ + +  Y +       ++  D M   G
Sbjct: 199 ILGGFVSRGDLVNAEKVFSEISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNG 258

Query: 150 FTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCN----LCKLNDVSNVK 205
             PN     +++D   K  +      ++ +     FL  +   C     LC+   V N  
Sbjct: 259 VEPNEVTYGVMIDAYCKEKKSGEARNLIDDMLDKKFLPSSTLCCKVIDVLCEDGKVENAC 318

Query: 206 DVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF 265
            +   M+ K   P+  +   L++  CK G++ EA +L       GT  S+  +  LI G 
Sbjct: 319 HLWKRMLEKNCLPDNAIMSTLIHWLCKEGKVWEARKLFD-EFEQGTIPSLMTYNTLIAGM 377

Query: 266 RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL 325
                L+ AG LW+ MV+  C PN  TY  LIKGFM+A +       L+ +   G  P+ 
Sbjct: 378 CERGELNEAGRLWDDMVEKRCRPNAFTYNMLIKGFMKAGVVKEGVRILEEMLDNGCLPNK 437

Query: 326 VFHNVLIDCLSKMGSYDD 343
             + +LI+ L + G   D
Sbjct: 438 STYTLLIEGLQESGMEGD 455



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 93/205 (45%), Gaps = 5/205 (2%)

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTML--- 419
           F S++    L+GR  L  K    ++ E  +     LL+        N+   L  + L   
Sbjct: 89  FISVIRNYGLAGRPRLALKTFTRIKEEFSMQPSVKLLNTLLNVFVQNKRYHLVGSTLKNC 148

Query: 420 -DK-GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
            DK G  P+ +SF  L++ LC    ++ A+ V+  +       N   +T I+   +  G 
Sbjct: 149 KDKYGVLPNVFSFNILIKALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGD 208

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
              A ++F     + +  D  +YTV + G  + GR  +A  +   M++  V PN  TY V
Sbjct: 209 LVNAEKVFSEISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGV 268

Query: 538 MLLSFCKERNIKMVKRLLQDVIDAR 562
           M+ ++CKE+     + L+ D++D +
Sbjct: 269 MIDAYCKEKKSGEARNLIDDMLDKK 293


>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g02150
 gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 761

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 134/604 (22%), Positives = 238/604 (39%), Gaps = 69/604 (11%)

Query: 44  FPIILAPHIVHSTLLNCPSD-LIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFET 102
           F + LAP  V   L+    D  +A  FF W   +  + H V+S+  +++ +      +  
Sbjct: 102 FDLTLAPIWVPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESY-CIVAHILFCARMYYD 160

Query: 103 VRGIVGE--LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIV 160
              ++ E  L++  C +          + W                R    P     + +
Sbjct: 161 ANSVLKEMVLSKADCDV--------FDVLWST--------------RNVCVPGFGVFDAL 198

Query: 161 MDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
             VL  +G ++  I+   + +     P   S N  L    KL    +VK     M+  G 
Sbjct: 199 FSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGA 258

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
            P V  + I+++C CK G +  A  L   M   G       +  +IDGF ++ RLD    
Sbjct: 259 RPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVC 318

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
            +E+M    C P+V+TY +LI  F +     I   F   ++  G  P++V ++ L+D   
Sbjct: 319 FFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFC 378

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL-------------- 382
           K G    A+  Y  +  + LVP+ YT+ SL+   C  G  S   +L              
Sbjct: 379 KEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVV 438

Query: 383 --------VCGLE----------------VEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
                   +C  E                V  +L  YNAL+  F KA   ++A++L N +
Sbjct: 439 TYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL 498

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
             +G  PD   +   + GLC   KI+ A  V   +       N+ ++T ++D   ++G  
Sbjct: 499 KGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNP 558

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKH-IAVPPNAYTYRV 537
            + + L          + VV++ V I GL +     +A   ++++ +   +  NA  +  
Sbjct: 559 TEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTA 618

Query: 538 MLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLG 597
           M+   CK+  ++    L + ++   +  D      L    FK  +   A+    +M  +G
Sbjct: 619 MIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIG 678

Query: 598 LIPD 601
           +  D
Sbjct: 679 MKLD 682



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 108/458 (23%), Positives = 210/458 (45%), Gaps = 11/458 (2%)

Query: 83  VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF 142
           V +++ MI  + +  G  E  RG+  E+   G V    T+   +  + +       +  F
Sbjct: 262 VFTYNIMIDCMCK-EGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFF 320

Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKL 198
           +EM      P+    N +++   K G++ +G++  +E +     PN +S++  +   CK 
Sbjct: 321 EEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKE 380

Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
             +         M R G  PN   +  L++  CK+G +++A++L   M+ +G   +V  +
Sbjct: 381 GMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTY 440

Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
           T LIDG     R+  A  L+ KM   G  PN+ +Y +LI GF++AK    A   L+ L+ 
Sbjct: 441 TALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKG 500

Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR--- 375
            G  PDL+ +   I  L  +   + A  V + + E  +  +S  + +L+     SG    
Sbjct: 501 RGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTE 560

Query: 376 -FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTML-DKGFTPDNYSFVGL 433
              LL ++   L++E  +V +  L+   CK    ++AV  +N +  D G   +   F  +
Sbjct: 561 GLHLLDEMK-ELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAM 619

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           + GLC   +++ A  +++ +V      +   +T+++D   + G   +A+ L  +      
Sbjct: 620 IDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGM 679

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
            LD+++YT  + GL    + ++A     +M    + P+
Sbjct: 680 KLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 717



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 124/283 (43%), Gaps = 19/283 (6%)

Query: 80  FHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVL 139
           F   ++ D  + ++  L GR     GI  +L   G      TF+  L    + E   +V+
Sbjct: 482 FVKAKNMDRALELLNELKGR-----GIKPDLLLYG------TFIWGLCSLEKIEAAKVVM 530

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF----LSFNIALCNL 195
              +EM   G   N+     +MD  FK G    G+ +L E +  +     ++F + +  L
Sbjct: 531 ---NEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGL 587

Query: 196 CKLNDVSNVKDVIGMMVRK-GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           CK   VS   D    +    G   N  +F  +++  CK  ++  A  L   M+  G    
Sbjct: 588 CKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPD 647

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
             A+T L+DG  +   +  A  L +KM + G   +++ YTSL+ G         A SFL+
Sbjct: 648 RTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLE 707

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
            +  EG  PD V    ++    ++G  D+A+++   L++ +L+
Sbjct: 708 EMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLL 750



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/300 (22%), Positives = 113/300 (37%), Gaps = 40/300 (13%)

Query: 109 ELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIG 168
           E+ +VG      T+   +      E      E F +M   G  PN  + N ++    K  
Sbjct: 427 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 486

Query: 169 RVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFE 224
            +D  +++L E +     P+ L +   +  LC L  +   K V+  M   G   N  ++ 
Sbjct: 487 NMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYT 546

Query: 225 ILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG-------------FRRL--- 268
            L++ + K G   E   LL  M  L   ++V  + VLIDG             F R+   
Sbjct: 547 TLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISND 606

Query: 269 --------------------RRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
                                +++ A  L+E+MVQ G  P+   YTSL+ G  +      
Sbjct: 607 FGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLE 666

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A +  D +   G   DL+ +  L+  LS       A    + ++   + PD     S+L 
Sbjct: 667 ALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLK 726


>gi|15217608|ref|NP_171708.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806399|sp|O81908.2|PPR2_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g02060, chloroplastic; Flags: Precursor
 gi|332189251|gb|AEE27372.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 710

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 130/546 (23%), Positives = 227/546 (41%), Gaps = 66/546 (12%)

Query: 57  LLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARV--G 114
           L+  P+D   L FF W +  + + H  QSF  M+  + R        R  +  + R   G
Sbjct: 77  LIKVPAD--GLRFFDWVS-NKGFSHKEQSFFLMLEFLGRARN-LNVARNFLFSIERRSNG 132

Query: 115 CV-IKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG 173
           CV ++ + F   +R Y    ++   ++ F  M + G +P+    N ++ +L K GR  + 
Sbjct: 133 CVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMA 192

Query: 174 IKVLKETQ-----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLN 228
             +  E +      P+  +FN  +   CK + V     +   M      P+V  +  +++
Sbjct: 193 HDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIID 252

Query: 229 CFCKMGRIAEAYQLLGLMITLGTSLSVN--AWTVLIDGFRRLRRLDMAGYLWEKMVQNGC 286
             C+ G++  A+ +L  M+   T +  N  ++T L+ G+   + +D A  ++  M+  G 
Sbjct: 253 GLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGL 312

Query: 287 SPNVVTYTSLIKGFMEAKMFSIAFSFL----DMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
            PN VTY +LIKG  EA  +      L    D   +   APD    N+LI      G  D
Sbjct: 313 KPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTT--FAPDACTFNILIKAHCDAGHLD 370

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL----------EVEADL 392
            A+ V+  +L +KL PDS ++  L+ T+C+   F     L   L          E +   
Sbjct: 371 AAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLA 430

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
             YN +  Y C  G   QA K++  ++ +G   D  S+  L+ G C   K   A   Y+ 
Sbjct: 431 AAYNPMFEYLCANGKTKQAEKVFRQLMKRG-VQDPPSYKTLITGHCREGKFKPA---YEL 486

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           +V+                            + RR  V     D+ +Y + I GLL+ G 
Sbjct: 487 LVL----------------------------MLRREFVP----DLETYELLIDGLLKIGE 514

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
              A+    +M   +  P A T+  +L    K +       L+  +++ RI  +   S +
Sbjct: 515 ALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQ 574

Query: 573 LTKFIF 578
           + + +F
Sbjct: 575 VVRLLF 580



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 106/523 (20%), Positives = 179/523 (34%), Gaps = 121/523 (23%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARV-GCVIKAQTFLLFLRIYWRGE 133
           KQ      V +F+ ++S++ +  GR      +  E+ R  G    + TF   +  + +  
Sbjct: 165 KQMGISPSVLTFNSLLSILLK-RGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNS 223

Query: 134 MYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL-----KETQL------ 182
           M       F +M  +   P+    N ++D L + G+V +   VL     K T +      
Sbjct: 224 MVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVS 283

Query: 183 ------------------------------PNFLSFNIALCNLCKLNDVSNVKDVI--GM 210
                                         PN +++N  +  L + +    +KD++  G 
Sbjct: 284 YTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGN 343

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
                F P+   F IL+   C  G +  A ++   M+ +       +++VLI        
Sbjct: 344 DAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNE 403

Query: 271 LDMA----GYLWEKMV---QNGCSP----------------------------------N 289
            D A      L+EK V   ++ C P                                  +
Sbjct: 404 FDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQD 463

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
             +Y +LI G      F  A+  L ++      PDL  + +LID L K+G    A D   
Sbjct: 464 PPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQ 523

Query: 350 GLLELKLVPDSYTFCSLLS---------------TVCLSGR---------------FSLL 379
            +L    +P + TF S+L+               T+ L  R               FS  
Sbjct: 524 RMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSA 583

Query: 380 PK-----LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
            K     +V  L     LV    LL Y C+      A  L    L+K    D  +   ++
Sbjct: 584 QKEKAFLIVRLLYDNGYLVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVI 643

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
            GLC  ++  EA ++Y  +V          H  + + L  AG+
Sbjct: 644 EGLCKHKRHSEAFSLYNELVELGNHQQLSCHVVLRNALEAAGK 686


>gi|298204849|emb|CBI34156.3| unnamed protein product [Vitis vinifera]
          Length = 442

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 102/391 (26%), Positives = 188/391 (48%), Gaps = 20/391 (5%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+ + F   L ++ K+   S V  +   M   G  PNV    IL+N FC + R+  A+ +
Sbjct: 43  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 102

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           L  ++ LG       +T LI G     ++  A +L++KM+  G  PNVVTY +LI G  +
Sbjct: 103 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 162

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
               S A   L  +E     PD+V +  +ID L K     +A +++  ++   + PD +T
Sbjct: 163 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 222

Query: 363 FCSLLSTVCLSGRF----SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
           + SL+  +C    +    +LL ++V   ++  D+V+++ ++   CK G   +A ++ + M
Sbjct: 223 YTSLVHALCNLCEWKHVTTLLNQMVNS-KILPDVVIFSTVVDALCKEGKVTEAHEIVDMM 281

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
           + +G  PD  ++  L+ G C   ++DEA+ V+  +V    A +   +T +++   + G  
Sbjct: 282 IQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINAGKKDGGG 341

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAI-----RGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
             ++Q     +V++ P  V    V +       L E GRT     L ++M +  + PN  
Sbjct: 342 LVSLQEV-IGLVKETPDAVKGGAVEVIRKDKMKLFEKGRT-----LLNEMVNSKIMPNVV 395

Query: 534 TYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
            +  ++ + CKE  +        DV+D  I+
Sbjct: 396 IFSTVVDALCKEGKVMEA----HDVVDMMIK 422



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 108/436 (24%), Positives = 184/436 (42%), Gaps = 51/436 (11%)

Query: 122 FLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVL 177
           F   L    + + Y  VL    +M  FG  PN +  NI+++    + RV        K+L
Sbjct: 48  FAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKIL 107

Query: 178 KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIA 237
           K    P+  +F   +  LC    +     +   M+ +GF PNV  +  L+N  CK+G  +
Sbjct: 108 KLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTS 167

Query: 238 EAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLI 297
            A +LL  M        V  +T +ID   + R++  A  L+ +MV  G SP++ TYTSL+
Sbjct: 168 AAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLV 227

Query: 298 KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
                   +    + L+ + +    PD+V  + ++D L K G   +A ++ D +++  + 
Sbjct: 228 HALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVE 287

Query: 358 PDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
           PD  T+ +L+   CL                                    ++AVK+++ 
Sbjct: 288 PDVVTYTTLMDGHCLQSEM--------------------------------DEAVKVFDM 315

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ--GIVMNNP-AVNAHVHTAIVD---R 471
           M+ KGF PD  S+  L+    G +     +++ +  G+V   P AV       I     +
Sbjct: 316 MVRKGFAPDVISYTTLINA--GKKDGGGLVSLQEVIGLVKETPDAVKGGAVEVIRKDKMK 373

Query: 472 LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
           L E GR      L    +  K   +VV ++  +  L + G+  EA+ +   M    V PN
Sbjct: 374 LFEKGR-----TLLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPN 428

Query: 532 AYTYRVMLLSFCKERN 547
           A   +V     C E+N
Sbjct: 429 A--VKVFDTMKCVEKN 442



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 64/277 (23%), Positives = 124/277 (44%), Gaps = 5/277 (1%)

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           LD A   + +++     P++V +  L+    + K +S   S    ++S G  P++   N+
Sbjct: 26  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 85

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLVCGL 386
           LI+    +     A  V   +L+L   PD  TF +L+  +C+ G+      L  K++   
Sbjct: 86  LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMI-DE 144

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
             + ++V Y  L++  CK G  + A++L  +M      PD   +  ++  LC  R++ EA
Sbjct: 145 GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEA 204

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
            N++  +V    + +   +T++V  L           L  + +  K   DVV ++  +  
Sbjct: 205 FNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDA 264

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           L + G+  EA+ +   M    V P+  TY  ++   C
Sbjct: 265 LCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHC 301


>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
          Length = 348

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/351 (25%), Positives = 171/351 (48%), Gaps = 11/351 (3%)

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           G++PN      L+   C  G+I +A+     ++ LG  L   ++  LI G  ++     A
Sbjct: 2   GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 61

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             L +++       N V Y ++I G  + K  + AF     + S+G +P++V ++ LI  
Sbjct: 62  LDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 121

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-------FSLLPKLVCGLE 387
              +G   DA+D+++ ++   + PD YTF  L+   C   +       F+++ K      
Sbjct: 122 FFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQ----G 177

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
           +  D+V YN+L+  +      N A  ++NTM   G  PD  S+  L+ G C  +K+D+A+
Sbjct: 178 IIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAM 237

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
           N++  +   N   N   + +++D L ++GR   A+QL  +      P ++++Y   I  L
Sbjct: 238 NLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDAL 297

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
            +  + ++A  L ++ K   + P+ YTY +++   CK   +K  + + +D+
Sbjct: 298 FKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIFEDL 348



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/327 (25%), Positives = 165/327 (50%), Gaps = 12/327 (3%)

Query: 136 GMVLEAF---DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL-----KETQLPNFLS 187
           G + +AF   D++   GF  +  +   ++  L K+G     + +L     K  QL N + 
Sbjct: 21  GQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQL-NAVM 79

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           +N  +  +CK   V++  D+   MV KG  PNV  +  L++ F  +G++ +A  L   +I
Sbjct: 80  YNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKII 139

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
                     + +L+DGF + R++     ++  M++ G  P+VVTY SL+ G+   K  +
Sbjct: 140 LENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVN 199

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A S  + +   G  PD+  +N+LI+   K+   D A+++++ +    ++P+  T+ SL+
Sbjct: 200 TAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLI 259

Query: 368 STVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
             +  SGR S   +LV  +    V  +++ YN+++    K    ++A+ L     D+G  
Sbjct: 260 DGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQ 319

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQ 451
           P  Y++  L+ GLC   ++ +A N+++
Sbjct: 320 PSMYTYTILIDGLCKGGRLKDARNIFE 346



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 129/262 (49%), Gaps = 12/262 (4%)

Query: 128 IYWRGEMYGM-----VLEAFD---EMGRFGFTPNTFARNIVMDVLFKIGR----VDLGIK 175
           + +   +YGM     V +AFD   EM   G +PN    + ++   F +G+    +DL  K
Sbjct: 78  VMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNK 137

Query: 176 VLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGR 235
           ++ E   P+  +FNI +   CK   +   K V  MM+++G  P+V  +  L++ +  +  
Sbjct: 138 IILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKE 197

Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
           +  A  +   M   G +  + ++ +LI+GF +++++D A  L+ +M      PNVVTY S
Sbjct: 198 VNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNS 257

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           LI G  ++   S A   +D +   G  P+++ +N +ID L K    D A+ +     +  
Sbjct: 258 LIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQG 317

Query: 356 LVPDSYTFCSLLSTVCLSGRFS 377
           + P  YT+  L+  +C  GR  
Sbjct: 318 IQPSMYTYTILIDGLCKGGRLK 339



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 144/322 (44%), Gaps = 9/322 (2%)

Query: 285 GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
           G  PN +T  +LIKG         AF F D L + G   D V +  LI  L K+G    A
Sbjct: 2   GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 61

Query: 345 LDV---YDG-LLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLS 400
           LD+    DG L++L  V  +     +     ++  F L  ++V    +  ++V Y+AL+S
Sbjct: 62  LDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSK-GISPNVVTYSALIS 120

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
            F   G    A+ L+N ++ +   PD Y+F  L+ G C  RK+ E   V+  ++      
Sbjct: 121 GFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIP 180

Query: 461 NAHVHTAIVD--RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
           +   + ++VD  RL++     K+I  F          D+ SY + I G  +  + ++A  
Sbjct: 181 DVVTYNSLVDGYRLVKEVNTAKSI--FNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMN 238

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
           L+++M    + PN  TY  ++    K   I    +L+  + D  +  +  T   +   +F
Sbjct: 239 LFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALF 298

Query: 579 KFHSSSSAVNQLVEMCNLGLIP 600
           K H    A+  + +  + G+ P
Sbjct: 299 KTHQVDKAIALITKFKDQGIQP 320



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/248 (20%), Positives = 105/248 (42%), Gaps = 5/248 (2%)

Query: 358 PDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVK 413
           P++ T  +L+  +CL G+    F    KLV  L    D V Y  L+   CK G    A+ 
Sbjct: 5   PNTITLNTLIKGLCLKGQIHQAFLFHDKLVA-LGFHLDQVSYGTLIHGLCKVGETRAALD 63

Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
           L   +  K    +   +  ++ G+C  + +++A ++Y  +V    + N   ++A++    
Sbjct: 64  LLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFF 123

Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
             G+   AI LF + I+E    D  ++ + + G  +  + +E   +++ M    + P+  
Sbjct: 124 VVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVV 183

Query: 534 TYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEM 593
           TY  ++  +   + +   K +   +    +  D  +   L     K      A+N   EM
Sbjct: 184 TYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEM 243

Query: 594 CNLGLIPD 601
               +IP+
Sbjct: 244 HCKNIIPN 251



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 74/180 (41%)

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
           G+ P+  +   L++GLC   +I +A   +  +V     ++   +  ++  L + G    A
Sbjct: 2   GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 61

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
           + L +R   +   L+ V Y   I G+ +     +A+ LYS+M    + PN  TY  ++  
Sbjct: 62  LDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 121

Query: 542 FCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           F     +K    L   +I   I+ D +T   L     K             M   G+IPD
Sbjct: 122 FFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPD 181



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/162 (22%), Positives = 75/162 (46%), Gaps = 5/162 (3%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV +++ ++    RL     T + I   +A+ G     +++ + +  + + +     +  
Sbjct: 181 DVVTYNSLVDGY-RLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNL 239

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
           F+EM      PN    N ++D L K GR+   ++++ +       PN L++N  +  L K
Sbjct: 240 FNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFK 299

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEA 239
            + V     +I     +G  P++  + IL++  CK GR+ +A
Sbjct: 300 THQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDA 341


>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
          Length = 897

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 162/349 (46%), Gaps = 12/349 (3%)

Query: 136 GMVLEAFDEM----GRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-----PNFL 186
           G V  A D M     R G  PN +    V+    K+GRVD  +KV  E        P  +
Sbjct: 528 GRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAV 587

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
            +N  +   C    +         MV +G    V  + +L++     GR  EAY+L+  M
Sbjct: 588 MYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEM 647

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
              G +  V  + +LI+G  +   +  A  ++E M + G    VVTYT+LI    +    
Sbjct: 648 GGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQV 707

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
                  D     G  PDLV +N LI+  S  G+ D A ++   + + ++ PD  T+ +L
Sbjct: 708 QETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTL 767

Query: 367 LSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           +  +CL GR     KL+  +    ++ DLV YN L+S +   G    A+++ N M++KGF
Sbjct: 768 MRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGF 827

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
            P   ++  L++GLC   + D+A N+ + +V N    +   + ++++ L
Sbjct: 828 NPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 876



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 93/409 (22%), Positives = 189/409 (46%), Gaps = 5/409 (1%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDV 201
           F +M R      T   NI++  L   G+    +++L++   PN +++N  +   C    V
Sbjct: 471 FADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPRPNAVTYNTVIAGFCSRGRV 530

Query: 202 SNVKDVI-GMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG-TSLSVNAWT 259
               D++  M  R G  PN   +  +++ +CK+GR+ EA ++   M+T G        + 
Sbjct: 531 QAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYN 590

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
            LI G+    +LD A    ++MV+ G +  V TY  L+         + A+  ++ +  +
Sbjct: 591 ALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK 650

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
           G APD+  +N+LI+   K G+   AL++++ +    +     T+ +L+  +   G+    
Sbjct: 651 GLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQET 710

Query: 380 PKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
            KL        +  DLV+YNAL++    +G  ++A ++   M  K   PD+ ++  L+RG
Sbjct: 711 DKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRG 770

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
           LC   ++DEA  +   +       +   +  ++      G    A+++    + + +   
Sbjct: 771 LCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPT 830

Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
           +++Y   I+GL + G+ ++A  +  +M    + P+  TY  ++     E
Sbjct: 831 LLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 879



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 94/448 (20%), Positives = 186/448 (41%), Gaps = 52/448 (11%)

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           +FNI L +LC     +   +++  M R    PN   +  ++  FC  GR+  A  ++  M
Sbjct: 485 TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREM 540

Query: 247 ITLGTSLSVNAWT--VLIDGFRRLRRLDMAGYLWEKMVQNG-CSPNVVTYTSLIKGFMEA 303
              G  ++ N +T   +I G+ ++ R+D A  ++++M+  G   P  V Y +LI G+ + 
Sbjct: 541 RERG-GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 599

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
                A  + D +   G A  +  +N+L+  L   G   +A ++ + +    L PD +T 
Sbjct: 600 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT- 658

Query: 364 CSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
                                          YN L++  CK G   +A++++  M  +G 
Sbjct: 659 -------------------------------YNILINGHCKEGNVKKALEIFENMSRRGV 687

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
                ++  L+  L    ++ E   ++   V      +  ++ A+++    +G   +A +
Sbjct: 688 RATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFE 747

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           +      ++   D V+Y   +RGL   GR +EA  L  +M    + P+  TY  ++  + 
Sbjct: 748 IMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYS 807

Query: 544 KERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
            + ++K   R+  ++++        T   L + + K      A N + EM   G+ PD+ 
Sbjct: 808 MKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDD- 866

Query: 604 WRKLGLLSDETMTPVSLFDGFVPCERRA 631
                       T +SL +G    + RA
Sbjct: 867 -----------STYISLIEGLTTEDERA 883



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 125/277 (45%), Gaps = 10/277 (3%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFD---EMGRFGFTPNT 154
           G+ +T       +   G  +   T+ L +   +   M G   EA++   EMG  G  P+ 
Sbjct: 600 GKLDTALLYRDRMVERGVAMTVATYNLLVHALF---MDGRGTEAYELVEEMGGKGLAPDV 656

Query: 155 FARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGM 210
           F  NI+++   K G V   +++ +           +++   +  L K   V     +   
Sbjct: 657 FTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDE 716

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
            VR+G  P++ ++  L+N     G I  A++++G M     +     +  L+ G   L R
Sbjct: 717 AVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGR 776

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           +D A  L ++M + G  P++VTY +LI G+        A    + + ++G  P L+ +N 
Sbjct: 777 VDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNA 836

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
           LI  L K G  DDA ++   ++E  + PD  T+ SL+
Sbjct: 837 LIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 873



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 52/245 (21%), Positives = 102/245 (41%), Gaps = 4/245 (1%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           + GR      +V E+   G      T+ + +  + +       LE F+ M R G      
Sbjct: 633 MDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVV 692

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
               ++  L K G+V    K+  E       P+ + +N  + +     ++    +++G M
Sbjct: 693 TYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 752

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
            +K   P+   +  L+   C +GR+ EA +L+  M   G    +  +  LI G+     +
Sbjct: 753 EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDV 812

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
             A  +  +M+  G +P ++TY +LI+G  +      A + +  +   G  PD   +  L
Sbjct: 813 KDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISL 872

Query: 332 IDCLS 336
           I+ L+
Sbjct: 873 IEGLT 877


>gi|255542424|ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548236|gb|EEF49727.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 532

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 109/437 (24%), Positives = 209/437 (47%), Gaps = 19/437 (4%)

Query: 65  IALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLL 124
           + L F  +C       H   +++ +I  + ++ G  + V  ++G +   G +I ++    
Sbjct: 75  VGLKFMEFCRLNFSLIHCFSTYELLIRSLCQM-GLHDLVEMVIGYMRSDGHLIDSRVLGF 133

Query: 125 FLRIYWRGEMYGM----VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET 180
            +  + +   + +    ++E   E  R     ++F  N +++ L K G+V   I + KE 
Sbjct: 134 LVTSFAQAGKFDLAKKLIIEVQGEEARI----SSFVYNYLLNELVKGGKVHEAIFLFKEN 189

Query: 181 ----QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
                 PN  +FNI +  LC++ +V    ++   M   G  P+V  +  L++  CK   +
Sbjct: 190 LAFHSPPNTWTFNILIRGLCRVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANEL 249

Query: 237 AEAYQLLGLMITLGT-SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
             A  LL  + +    S  V  +T +I GFR+L +L+ A  L+E+M+++G  P VVT+  
Sbjct: 250 DRACDLLKEVQSRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNV 309

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           LI GF +      A +  + + S    PD+V    LID   + G     L V+D +    
Sbjct: 310 LIDGFGKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARN 369

Query: 356 LVPDSYTFCSLLSTVCLSGRF----SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQA 411
           + P+ YT+  +++ +C   R      LL +L C  +V     +YN ++  FCKAG  ++A
Sbjct: 370 VSPNIYTYSVIINALCKDNRIHEARDLLRQLKCS-DVFPKPFIYNPVIDGFCKAGNVDEA 428

Query: 412 VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
             +   M +K   PD  +F  L+ G C   ++ EA+++++ ++    A +    +++V  
Sbjct: 429 NVIVTEMEEKRCRPDKVTFTILIIGHCMKGRMVEALDIFKKMLAIGCAPDNITISSLVAC 488

Query: 472 LIEAGRCHKAIQLFRRA 488
           L++AG+  +A  + + A
Sbjct: 489 LLKAGKPSEAFHIVQTA 505



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 84/364 (23%), Positives = 164/364 (45%), Gaps = 6/364 (1%)

Query: 185 FLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLG 244
           F ++ + + +LC++     V+ VIG M   G   + R+   L+  F + G+   A +L+ 
Sbjct: 93  FSTYELLIRSLCQMGLHDLVEMVIGYMRSDGHLIDSRVLGFLVTSFAQAGKFDLAKKLII 152

Query: 245 LMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
            +      +S   +  L++   +  ++  A +L+++ +     PN  T+  LI+G     
Sbjct: 153 EVQGEEARISSFVYNYLLNELVKGGKVHEAIFLFKENLAFHSPPNTWTFNILIRGLCRVG 212

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK-LVPDSYTF 363
                F   + ++S G  PD+V +N LI  L K    D A D+   +       PD  T+
Sbjct: 213 EVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTY 272

Query: 364 CSLLSTVCLSGRF---SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
            S++S     G+    S+L + +    +E  +V +N L+  F K G    A  ++  M  
Sbjct: 273 TSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMAS 332

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
               PD  +F  L+ G C    I   + V+  +   N + N + ++ I++ L +  R H+
Sbjct: 333 YSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPNIYTYSVIINALCKDNRIHE 392

Query: 481 AIQLFRR-AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
           A  L R+    + +P   + Y   I G  + G  +EA ++ ++M+     P+  T+ +++
Sbjct: 393 ARDLLRQLKCSDVFPKPFI-YNPVIDGFCKAGNVDEANVIVTEMEEKRCRPDKVTFTILI 451

Query: 540 LSFC 543
           +  C
Sbjct: 452 IGHC 455



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 60/267 (22%), Positives = 116/267 (43%), Gaps = 4/267 (1%)

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           L+  F +A  F +A   +  ++ E        +N L++ L K G   +A+ ++   L   
Sbjct: 134 LVTSFAQAGKFDLAKKLIIEVQGEEARISSFVYNYLLNELVKGGKVHEAIFLFKENLAFH 193

Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAV 412
             P+++TF  L+  +C  G      +L   ++      D+V YN L+S  CKA   ++A 
Sbjct: 194 SPPNTWTFNILIRGLCRVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRAC 253

Query: 413 KLYNTMLDKG-FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
            L   +  +   +PD  ++  ++ G     K++ A  +++ ++ +           ++D 
Sbjct: 254 DLLKEVQSRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDG 313

Query: 472 LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
             + G    A  +  +        DVV++T  I G    G       ++  MK   V PN
Sbjct: 314 FGKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPN 373

Query: 532 AYTYRVMLLSFCKERNIKMVKRLLQDV 558
            YTY V++ + CK+  I   + LL+ +
Sbjct: 374 IYTYSVIINALCKDNRIHEARDLLRQL 400



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/164 (22%), Positives = 73/164 (44%)

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           Y  L+   C+ G  +    +   M   G   D+     L+     A K D A  +   + 
Sbjct: 96  YELLIRSLCQMGLHDLVEMVIGYMRSDGHLIDSRVLGFLVTSFAQAGKFDLAKKLIIEVQ 155

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
                +++ V+  +++ L++ G+ H+AI LF+  +    P +  ++ + IRGL   G  E
Sbjct: 156 GEEARISSFVYNYLLNELVKGGKVHEAIFLFKENLAFHSPPNTWTFNILIRGLCRVGEVE 215

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           + + L++ M+     P+  TY  ++   CK   +     LL++V
Sbjct: 216 KGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEV 259


>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 485

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/366 (24%), Positives = 175/366 (47%), Gaps = 6/366 (1%)

Query: 184 NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
           +  ++NI +  LC+ +       V+G M++ G+ P+V     L+N FC+  R+  A  L+
Sbjct: 103 DLYTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLV 162

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
             M  +   L V  +  +IDGF +   ++ A  L+ +M ++G   + VTY SL+ G   +
Sbjct: 163 SKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCS 222

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
              S A   +  +      P+++    LI+   + G + +A   Y+ ++   + PD +T+
Sbjct: 223 GRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTY 282

Query: 364 CSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
            S++  +C+ G+     +++  +  +    D+V YN L++ FCK    ++  KL   M  
Sbjct: 283 NSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQ 342

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
           +G   D  +F  +++G   A + D A  ++  +       N   ++ ++  L    R  K
Sbjct: 343 RGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSILLYGLCYNWRVEK 399

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
           A+ LF      +  LD+ +Y + I G+   G  E+A+ L+  +    + P+  TY  M+ 
Sbjct: 400 ALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMIS 459

Query: 541 SFCKER 546
            FC++R
Sbjct: 460 GFCRKR 465



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 140/291 (48%), Gaps = 3/291 (1%)

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           LD A  L+  M+Q+   P++V ++ L+    ++K + +  S    +E  G   DL  +N+
Sbjct: 50  LDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNI 109

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE--- 387
           +I+CL +   +  AL V   +++    PD  T  SL++  C   R      LV  +E   
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMR 169

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
            + D+V+YN ++  FCK G  N A+ L+  M   G   D  ++  L+ GLC + +  +A 
Sbjct: 170 CKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAA 229

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            + + +VM +   N    TA+++  +  G+  +A + +   I      DV +Y   I GL
Sbjct: 230 RLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGL 289

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
              G+ +EA  +   M      P+  TY  ++  FCK + +    +L++++
Sbjct: 290 CMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREM 340



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 96/407 (23%), Positives = 181/407 (44%), Gaps = 10/407 (2%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFL 186
           + + Y +V+  F  M   G   + +  NIV++ L +  R  + +    K++K    P+ +
Sbjct: 81  KSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVV 140

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
           + +  +   C+ N V    D++  M       +V ++  +++ FCK G +  A  L G M
Sbjct: 141 TVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRM 200

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
              G       +  L+ G     R   A  L   MV     PNV+T+T+LI  F+    F
Sbjct: 201 ERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKF 260

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
             A  F + +      PD+  +N +I  L   G  D+A  + D ++     PD  T+ +L
Sbjct: 261 LEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTL 320

Query: 367 LSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           ++  C + R     KLV  +       D V +N ++  + +AG P+ A ++++ M   G 
Sbjct: 321 INGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRM---GS 377

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
            P+  ++  LL GLC   ++++A+ +++ +  +   ++   +  ++  +   G    A  
Sbjct: 378 RPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWD 437

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
           LF     +    DVV+YT  I G       ++A  LY +M+   + P
Sbjct: 438 LFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKMQEDGLLP 484



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/370 (21%), Positives = 156/370 (42%), Gaps = 41/370 (11%)

Query: 238 EAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLI 297
           EA  L   MI      S+  ++ L+    + +  D+   L+  M   G   ++ TY  +I
Sbjct: 52  EAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVI 111

Query: 298 KGFMEAKMFSIAFSFLDMLESEGHAP---------------------------------- 323
                   F IA S +  +   G+ P                                  
Sbjct: 112 NCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCK 171

Query: 324 -DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL 382
            D+V +N +ID   K G  ++AL ++  +    +  D+ T+ SL++ +C SGR S   +L
Sbjct: 172 LDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARL 231

Query: 383 VCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
           +  +   ++  +++ + AL++ F + G   +A K Y  M+ +   PD +++  ++ GLC 
Sbjct: 232 MRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCM 291

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
             ++DEA  +   +V      +   +  +++   +  R  +  +L R        +D V+
Sbjct: 292 HGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVT 351

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           +   I+G  + GR + A  ++S+M      PN  TY ++L   C    ++    L + + 
Sbjct: 352 FNTIIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSILLYGLCYNWRVEKALVLFESMQ 408

Query: 560 DARIELDYHT 569
            + +ELD  T
Sbjct: 409 KSEMELDITT 418



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 59/264 (22%), Positives = 117/264 (44%), Gaps = 5/264 (1%)

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNAL 398
           D+A+D++  +++ + +P    F  LLS +  S  + L+  L   +E+     DL  YN +
Sbjct: 51  DEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIV 110

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           ++  C+      A+ +   M+  G+ PD  +   L+ G C   ++  A+++   +     
Sbjct: 111 INCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRC 170

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
            ++  ++  I+D   + G  + A+ LF R   +    D V+Y   + GL   GR  +A  
Sbjct: 171 KLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAAR 230

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
           L   M    + PN  T+  ++ +F +E      K+  +++I   I+ D  T   +   + 
Sbjct: 231 LMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLC 290

Query: 579 KFHSSSSAVNQLVE-MCNLGLIPD 601
             H       Q+++ M   G  PD
Sbjct: 291 -MHGQVDEAKQILDLMVTKGCFPD 313



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/377 (20%), Positives = 152/377 (40%), Gaps = 70/377 (18%)

Query: 52  IVHSTLLN--CPSDLIALSFFIWCAKQRDYFH-DVQSFDHMISVVTRLTGRFETVRGIVG 108
           ++++T+++  C + L+  +  ++   +RD    D  +++ +++ +   +GR      ++ 
Sbjct: 175 VIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLC-CSGRRSDAARLMR 233

Query: 109 ELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIG 168
           ++     V    TF   +  + R   +    + ++EM R    P+ F             
Sbjct: 234 DMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFT------------ 281

Query: 169 RVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLN 228
                              +N  +  LC    V   K ++ +MV KG +P+V  +  L+N
Sbjct: 282 -------------------YNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLIN 322

Query: 229 CFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSP 288
            FCK  R+ E  +L+  M   G  +    +  +I G+ +  R D A  ++ +M   G  P
Sbjct: 323 GFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRM---GSRP 379

Query: 289 NVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVY 348
           N+ TY+ L+ G         A    + ++      D+  +N++I  +  +G+ +DA D+ 
Sbjct: 380 NIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDL- 438

Query: 349 DGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFP 408
                         FCSL       G             +E D+V Y  ++S FC+    
Sbjct: 439 --------------FCSL----SFKG-------------LEPDVVTYTTMISGFCRKRLW 467

Query: 409 NQAVKLYNTMLDKGFTP 425
           ++A  LY  M + G  P
Sbjct: 468 DKADFLYRKMQEDGLLP 484


>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
 gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
          Length = 428

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 172/356 (48%), Gaps = 6/356 (1%)

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M  + F  +  ++  L+   CK  +   A +LL +M   G   SV  +T LIDG  +   
Sbjct: 1   MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           LD A  L +KM   GC+PNVVTYT+LI G  +A+    A   +  +   G  PDLV +N 
Sbjct: 61  LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120

Query: 331 LIDCLSKMGSYDDA-LDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCG 385
           LI  L      DDA L + + ++E   +PD  T+ + +S +C +G+      +L ++  G
Sbjct: 121 LIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRG 180

Query: 386 LEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
             +  D+V + +++S  CKA   + A +++  ML++G  PD+ ++  +L  L  A ++D 
Sbjct: 181 -GISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDT 239

Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
              V + +V +     +  +  ++  LI AG    A   + +A+     ++V ++   I 
Sbjct: 240 VEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIG 299

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
            L   G+   A  +   M      PN  +Y  ++   CK  N+    +L + ++D+
Sbjct: 300 ALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDS 355



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/376 (24%), Positives = 173/376 (46%), Gaps = 5/376 (1%)

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           +N  +  LCK     +  +++ +M   G+  +V  +  L++  CK G +  A  LL  M 
Sbjct: 13  YNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMA 72

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF-MEAKMF 306
             G + +V  +T LIDG  + RR   A    ++M+++GC P++VTY SLI G  M  +M 
Sbjct: 73  DAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMD 132

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
                  +++   G  PD+V +N  I  L K G  D  L++ + +    + PD  TFCS+
Sbjct: 133 DAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSI 192

Query: 367 LSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           +S +C + R     ++  G+       D + Y+ +L    +A   +   ++   M+  G 
Sbjct: 193 ISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGH 252

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
              + ++  L+  L  A  I+ A   Y+  +     +  + H A +  L  +G+   A  
Sbjct: 253 YALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKN 312

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM-KHIAVPPNAYTYRVMLLSF 542
           +    I      +++SY   I GL + G  ++A+ L  +M       P+   +  ++  F
Sbjct: 313 ILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGF 372

Query: 543 CKERNIKMVKRLLQDV 558
           CK   +   ++LL+++
Sbjct: 373 CKAGRLSQAQQLLKEM 388



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 175/382 (45%), Gaps = 8/382 (2%)

Query: 184 NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
           + +++   +  LCK  D+   + ++  M   G  PNV  +  L++  CK  R  +A Q +
Sbjct: 44  SVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTV 103

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAG-YLWEKMVQNGCSPNVVTYTSLIKGFME 302
             M+  G    +  +  LI G     R+D AG  L E M+++G  P+VVTY + I G  +
Sbjct: 104 KRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCK 163

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
           A         L+ ++  G +PD+V    +I  L K    DDA  V+ G+LE   VPDS T
Sbjct: 164 AGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLT 223

Query: 363 FCSLLSTVCLSGRFSLLPKLVCGLEVEADLVV---YNALLSYFCKAGFPNQAVKLYNTML 419
           +  +L  +  + R   + +++  +       +   Y  L+    +AG    A   Y   +
Sbjct: 224 YSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAM 283

Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
           + G   + Y+    +  LC + K   A N+  G++ +    N   +  ++D L ++G   
Sbjct: 284 EAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVD 343

Query: 480 KAIQLFRRAIVEK-YPLDVVSYTVAIRGLLEGGRTEEAYILYSQM--KHIAVPPNAYTYR 536
            A +L R+ +       DV+ +   I G  + GR  +A  L  +M  K+I V P+  TY 
Sbjct: 344 DAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICV-PDVVTYN 402

Query: 537 VMLLSFCKERNIKMVKRLLQDV 558
            M+    K  ++K  K LL+++
Sbjct: 403 TMIDGQSKFGSLKQAKLLLEEM 424



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/351 (23%), Positives = 164/351 (46%), Gaps = 12/351 (3%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           +G  +  + ++ ++A  GC     T+   +    +       ++    M R G  P+   
Sbjct: 58  SGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVT 117

Query: 157 RNIVMDVLFKIGRVDLGIKVLKE-----TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
            N ++  L    R+D    VL+E      ++P+ +++N  +  LCK   +    +++  M
Sbjct: 118 YNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEM 177

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
            R G  P+V  F  +++  CK  RI +A+Q+   M+  G       +++++D   R  RL
Sbjct: 178 DRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRL 237

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA-KMFSIAFSFLDMLESEGHAPDLVFHNV 330
           D    + E MV++G      TY  LI   + A  + S ++++   +E+ G   ++  HN 
Sbjct: 238 DTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEA-GCVMEVYTHNA 296

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGL 386
            I  L + G +  A ++  G++E   +P+  ++  ++  +C SG     + L  K++   
Sbjct: 297 FIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSG 356

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF-TPDNYSFVGLLRG 436
             + D++ +N L+S FCKAG  +QA +L   M  K    PD  ++  ++ G
Sbjct: 357 CCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDG 407



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 1/214 (0%)

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           D  +YN L++  CKA  P  A++L + M   G+     ++  L+ GLC +  +D A  + 
Sbjct: 9   DAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALL 68

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
           Q +     A N   +TA++D L +A R H AIQ  +R +      D+V+Y   I GL   
Sbjct: 69  QKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMA 128

Query: 511 GRTEEA-YILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
            R ++A  +L   M      P+  TY   +   CK   +     +L+++    I  D  T
Sbjct: 129 NRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVT 188

Query: 570 SIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
              +   + K +    A      M   G +PD +
Sbjct: 189 FCSIISGLCKANRIDDAFQVFKGMLERGCVPDSL 222



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 57/248 (22%), Positives = 109/248 (43%), Gaps = 13/248 (5%)

Query: 82  DVQSFDHMIS---VVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMV 138
           DV +F  +IS      R+   F+  +G++      GCV  + T+ + L    R      V
Sbjct: 185 DVVTFCSIISGLCKANRIDDAFQVFKGML----ERGCVPDSLTYSIMLDNLSRANRLDTV 240

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCN 194
            E  + M + G    +     ++  L + G ++       + ++   +    + N  +  
Sbjct: 241 EEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGA 300

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT-SL 253
           LC+       K+++  M+  G  PN+  +  +++  CK G + +A++L   M+  G    
Sbjct: 301 LCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKP 360

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKM-VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
            V  +  LI GF +  RL  A  L ++M  +N C P+VVTY ++I G  +      A   
Sbjct: 361 DVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLL 420

Query: 313 LDMLESEG 320
           L+ +++ G
Sbjct: 421 LEEMQAVG 428


>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
          Length = 578

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 99/375 (26%), Positives = 173/375 (46%), Gaps = 13/375 (3%)

Query: 74  AKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWR-- 131
           A +R    D+ +F+ +IS + R+ G+      +  ++   G      T+   +  Y +  
Sbjct: 182 ALRRRVSPDIYTFNTVISGLCRI-GQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKG 240

Query: 132 --GEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNF 185
             G MY + +    EM   G +P      ++++   K       ++V +E +      + 
Sbjct: 241 GAGNMYHVDM-LLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASV 299

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGL 245
           +++N  +  LC    V     ++  M   G  PN   F  +L  FCK G +A+A   +  
Sbjct: 300 VTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDG 359

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           M        V  +T+LIDG+RRL +++ A  + E M + G SPNV TY  LI GF  +  
Sbjct: 360 MTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGD 419

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
           +  A   LD ++ +G   D+V +NVLI  L   G    A+ + D + E+ L P+  T+ +
Sbjct: 420 WRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNT 479

Query: 366 LLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
           ++   C  G      ++   +E     A++V YN  + YFC+ G  ++A  L N MLDK 
Sbjct: 480 IIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKC 539

Query: 423 FTPDNYSFVGLLRGL 437
             P+  ++  +  G+
Sbjct: 540 LVPNGITYETIKEGM 554



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 94/386 (24%), Positives = 177/386 (45%), Gaps = 10/386 (2%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNL 195
           +AF    R   +P+ +  N V+  L +IG++     V K+ +     P+  ++N  +   
Sbjct: 177 KAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGY 236

Query: 196 CKLNDVSNVKDV---IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
           CK     N+  V   +  MV  G  P    F +L+N +CK    A A ++   M   G +
Sbjct: 237 CKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIA 296

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
            SV  +  LI G     +++    L E+M   G SPN +T+  ++KGF +  M + A  +
Sbjct: 297 ASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDW 356

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
           +D +      PD+V + +LID   ++G  +DA+ V + + +  + P+  T+  L++    
Sbjct: 357 IDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSR 416

Query: 373 SGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
           SG +     L+  ++   +EAD+V YN L+   C  G   +AVKL + M + G  P++ +
Sbjct: 417 SGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLT 476

Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
           +  +++G C    I  A  +   +       N   +   +    + G+  +A  L    +
Sbjct: 477 YNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEML 536

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEE 515
            +    + ++Y     G++E G T +
Sbjct: 537 DKCLVPNGITYETIKEGMMEKGYTPD 562



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 101/453 (22%), Positives = 187/453 (41%), Gaps = 54/453 (11%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+  S N  L  L     V   +      +R+   P++  F  +++  C++G++ +A  +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRR------LRRLDMAGYLWEKMVQNGCSPNVVTYTSL 296
              +   G + SV  +  LIDG+ +      +  +DM   L ++MV+ G SP  VT+  L
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDM---LLKEMVEAGISPTAVTFGVL 270

Query: 297 IKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
           I G+ +    + A    + ++ +G A  +V +N LI  L   G  ++ + + + + +L L
Sbjct: 271 INGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGL 330

Query: 357 VPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVK 413
            P+  TF  +L   C  G  +     + G+    VE D+V+Y  L+  + + G    A+ 
Sbjct: 331 SPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMA 390

Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
           +   M  KG +P+  ++  L+ G   +     A                   + ++D + 
Sbjct: 391 VKEAMAKKGISPNVTTYNCLITGFSRSGDWRSA-------------------SGLLDEMK 431

Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
           E G                   DVV+Y V I  L   G   +A  L  +M  + + PN  
Sbjct: 432 EKG----------------IEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHL 475

Query: 534 TYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEM 593
           TY  ++  FC + NIK    +   +   R   +  T     K+  +      A + L EM
Sbjct: 476 TYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEM 535

Query: 594 CNLGLIPDEMWRKLGLLSDETMTPVSLFDGFVP 626
            +  L+P+        ++ ET+    +  G+ P
Sbjct: 536 LDKCLVPNG-------ITYETIKEGMMEKGYTP 561



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 69/324 (21%), Positives = 122/324 (37%), Gaps = 41/324 (12%)

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL-- 378
           H P     N L+  L      D A   +   L  ++ PD YTF +++S +C  G+     
Sbjct: 152 HRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAG 211

Query: 379 -LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVK---LYNTMLDKGFTPDNYSFVGLL 434
            + K +    +   +  YN+L+  +CK G          L   M++ G +P   +F  L+
Sbjct: 212 DVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLI 271

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR------- 487
            G C       A+ V++ +     A +   + +++  L   G+  + ++L          
Sbjct: 272 NGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLS 331

Query: 488 ---------------------------AIVEK-YPLDVVSYTVAIRGLLEGGRTEEAYIL 519
                                       + E+    DVV YT+ I G    G+ E+A  +
Sbjct: 332 PNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAV 391

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK 579
              M    + PN  TY  ++  F +  + +    LL ++ +  IE D  T   L   +  
Sbjct: 392 KEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCC 451

Query: 580 FHSSSSAVNQLVEMCNLGLIPDEM 603
                 AV  L EM  +GL P+ +
Sbjct: 452 KGEVRKAVKLLDEMSEVGLEPNHL 475


>gi|255560884|ref|XP_002521455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539354|gb|EEF40945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 623

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 133/551 (24%), Positives = 243/551 (44%), Gaps = 54/551 (9%)

Query: 48  LAPHI----VHSTLLNCPSDLI-ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFET 102
           L PH+    +   LL C SD I AL+FF W          +Q++  ++ ++   +  F+ 
Sbjct: 85  LLPHLGTDEISRVLLRCQSDSISALTFFSWVKNDLGLQPSIQNYCFLVHILA-WSKEFKE 143

Query: 103 VRGIVGELARV--GCVIKAQTF--LLFL--RIYWRGEMYGMVLEAF--DEMGRFGFT--- 151
               + EL ++   C      F  LLF      W   ++ M+++A+  + M + GFT   
Sbjct: 144 AMKFLTELIKLVKDCSFNEDVFQTLLFCCQDCNWDPVIFDMLVKAYVREGMIKEGFTTFR 203

Query: 152 --------PNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLN 199
                   P+  + N +++ L K+ R+D   +V KE       PN  +FNI     C+  
Sbjct: 204 KIVEVGCVPSVISCNCLLNGLLKLNRIDQCWQVYKEMARVGIHPNSYTFNILTHVFCQDG 263

Query: 200 DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT 259
           DV  V D +  M  +GF P++  +  L++C+C+ GR+ +A+ L  +M        + ++T
Sbjct: 264 DVDKVNDFLERMEEEGFEPDIVTYNTLISCYCRKGRLDDAFYLYRIMYRRNVLPDLVSYT 323

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
            L++G  +  ++  A  L+ +M+  G +P++V++ +LI G+ +      + S L  +   
Sbjct: 324 ALMNGLCKEGKVREAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRESRSLLHEMIGS 383

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR---- 375
           G  PD V   VLI+   K      AL++   L    +   +  +  L+ ++C  GR    
Sbjct: 384 GICPDKVTCQVLIEGYRKEARIVSALNLVVELERFGVPISTDIYDYLMVSICEEGRPFAA 443

Query: 376 FSLLPKL-----VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
            SLL ++     V G+E      +YN L+   CK+     A+ + + M  +   P   ++
Sbjct: 444 KSLLQRISQRGYVPGVE------IYNKLIESLCKSDSIADALLVKSEMGHRNIKPSAITY 497

Query: 431 VGLLRGLCGARKIDEAINVYQ-----GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
             L+  LC   +  EA ++ +     G++ +     A +H    +R I  G+    +Q F
Sbjct: 498 KALICCLCRTSRSMEAESLMEEMLQSGMLPDPDICRALMHVYCKERDI--GKAETLLQTF 555

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
            +   E    D  SY   ++   E         L  +M  +   PN  T+R M+    K 
Sbjct: 556 AK---EFQIFDSESYNTLVKTYCEDADATRLMELQDRMLKVGFAPNIQTFRQMIHGLWKA 612

Query: 546 RNIKMVKRLLQ 556
             ++  K LL+
Sbjct: 613 MAVEKDKLLLE 623



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 81/343 (23%), Positives = 162/343 (47%), Gaps = 3/343 (0%)

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
           +F++L+  + + G I E +     ++ +G   SV +   L++G  +L R+D    ++++M
Sbjct: 181 IFDMLVKAYVREGMIKEGFTTFRKIVEVGCVPSVISCNCLLNGLLKLNRIDQCWQVYKEM 240

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
            + G  PN  T+  L   F +         FL+ +E EG  PD+V +N LI C  + G  
Sbjct: 241 ARVGIHPNSYTFNILTHVFCQDGDVDKVNDFLERMEEEGFEPDIVTYNTLISCYCRKGRL 300

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNAL 398
           DDA  +Y  +    ++PD  ++ +L++ +C  G+     +L   +    +  D+V +N L
Sbjct: 301 DDAFYLYRIMYRRNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHRGLNPDIVSFNTL 360

Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
           +  +CK G   ++  L + M+  G  PD  +   L+ G     +I  A+N+   +     
Sbjct: 361 ICGYCKEGKMRESRSLLHEMIGSGICPDKVTCQVLIEGYRKEARIVSALNLVVELERFGV 420

Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
            ++  ++  ++  + E GR   A  L +R     Y   V  Y   I  L +     +A +
Sbjct: 421 PISTDIYDYLMVSICEEGRPFAAKSLLQRISQRGYVPGVEIYNKLIESLCKSDSIADALL 480

Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
           + S+M H  + P+A TY+ ++   C+       + L+++++ +
Sbjct: 481 VKSEMGHRNIKPSAITYKALICCLCRTSRSMEAESLMEEMLQS 523



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 66/296 (22%), Positives = 120/296 (40%), Gaps = 14/296 (4%)

Query: 309 AFSFLDMLESE-GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
           A +F   ++++ G  P +  +  L+  L+    + +A+     L+  KLV D    CS  
Sbjct: 108 ALTFFSWVKNDLGLQPSIQNYCFLVHILAWSKEFKEAMKFLTELI--KLVKD----CSFN 161

Query: 368 STVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
             V     F  L  L C  +   D V+++ L+  + + G   +    +  +++ G  P  
Sbjct: 162 EDV-----FQTL--LFCCQDCNWDPVIFDMLVKAYVREGMIKEGFTTFRKIVEVGCVPSV 214

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
            S   LL GL    +ID+   VY+ +       N++    +     + G   K      R
Sbjct: 215 ISCNCLLNGLLKLNRIDQCWQVYKEMARVGIHPNSYTFNILTHVFCQDGDVDKVNDFLER 274

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN 547
              E +  D+V+Y   I      GR ++A+ LY  M    V P+  +Y  ++   CKE  
Sbjct: 275 MEEEGFEPDIVTYNTLISCYCRKGRLDDAFYLYRIMYRRNVLPDLVSYTALMNGLCKEGK 334

Query: 548 IKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           ++   +L   +I   +  D  +   L     K      + + L EM   G+ PD++
Sbjct: 335 VREAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRESRSLLHEMIGSGICPDKV 390


>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
 gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
          Length = 447

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 197/413 (47%), Gaps = 20/413 (4%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTF-LLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           G+      +  ++   G +  A T   L L +   G+M    L+ F EM    F P + +
Sbjct: 39  GQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSS-ALKLFREMQAGPFLPTSAS 97

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG 215
            NI++   F  GR     K +K + + P+  S++I L     L+D   + +   +     
Sbjct: 98  HNILLRGFFMAGRAIEFFKEMKASGVEPDLESYHILLS---ALSDSGRMAEAHALFSAMT 154

Query: 216 FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAG 275
             P++  + +L++ +CK+G+  EA  L+  ++  G   +V  ++++I+ + +L +++ A 
Sbjct: 155 CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAW 214

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
            ++ KM+++ C PN VT+ +LI GF +A M   A      +E  G    +V +N LID L
Sbjct: 215 EVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSL 274

Query: 336 -SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---D 391
             K G    A+D+++ L    L P   T+ SL+     S R +   +L+C +  E    D
Sbjct: 275 CKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQG--FSERANDGLRLLCHMHAEGCKPD 332

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
           ++ YN L+S  C A     A +L+N M      P+  +F  L+RGLC  +K++EA N+  
Sbjct: 333 VITYNCLISGLCSANRVEDAQRLFNGM---ACAPNVTTFNFLIRGLCAQKKVEEARNILD 389

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK-YPLDVVSYTVA 503
            +     A +      I+    +AG  H A ++ +  +    YP    +Y +A
Sbjct: 390 RMT----APDMTTFNTIILAFCKAGAMHDAREVMKDMLKHGFYPNTYTTYALA 438



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/451 (23%), Positives = 201/451 (44%), Gaps = 23/451 (5%)

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNI 190
           +   L  F E+    F PN    N+++    K G++   + V  + +    LPN  + N 
Sbjct: 6   HDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNT 65

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            L  LC++  +S+   +   M    F P      ILL  F   GR  E ++    M   G
Sbjct: 66  LLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRAIEFFKE---MKASG 122

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
               + ++ +L+       R+  A  L+  M    CSP+++TY  L+ G+ +      A 
Sbjct: 123 VEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQ 179

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
           S +  +   G+ P++  ++++I+C  K+   ++A +V+  ++E   VP++ TF +L++  
Sbjct: 180 SLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGF 239

Query: 371 CLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKA-GFPNQAVKLYNTMLDKGFTPD 426
           C +G      KL   +E    +A +V YN L+   CK  G    AV L+N +   G TP 
Sbjct: 240 CKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPT 299

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
             ++  L++G   + + ++ + +   +       +   +  ++  L  A R   A +LF 
Sbjct: 300 IVTYNSLIQGF--SERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFN 357

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
                    +V ++   IRGL    + EEA  +  +M      P+  T+  ++L+FCK  
Sbjct: 358 GMACAP---NVTTFNFLIRGLCAQKKVEEARNILDRM----TAPDMTTFNTIILAFCKAG 410

Query: 547 NIKMVKRLLQDVIDARIELDYHTSIRLTKFI 577
            +   + +++D++      + +T+  L   I
Sbjct: 411 AMHDAREVMKDMLKHGFYPNTYTTYALAHGI 441



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/320 (27%), Positives = 148/320 (46%), Gaps = 21/320 (6%)

Query: 133 EMYGMVLEAFDEMGRFG----------FTPNTFARNIVMDVLFKIGRV----DLGIKVLK 178
           E Y ++L A  + GR             +P+    N++MD   KIG+      L  ++LK
Sbjct: 128 ESYHILLSALSDSGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILK 187

Query: 179 ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAE 238
               PN  +++I +   CKL+ V    +V   M+     PN   F  L+  FCK G + +
Sbjct: 188 AGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLED 247

Query: 239 AYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR-LDMAGYLWEKMVQNGCSPNVVTYTSLI 297
           A +L   M  +G   ++  +  LID   + R  +  A  L+ K+   G +P +VTY SLI
Sbjct: 248 AIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLI 307

Query: 298 KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
           +GF E    +     L  + +EG  PD++ +N LI  L      +DA  +++G+      
Sbjct: 308 QGFSERA--NDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGM---ACA 362

Query: 358 PDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
           P+  TF  L+  +C   +      ++  +    D+  +N ++  FCKAG  + A ++   
Sbjct: 363 PNVTTFNFLIRGLCAQKKVEEARNILDRM-TAPDMTTFNTIILAFCKAGAMHDAREVMKD 421

Query: 418 MLDKGFTPDNYSFVGLLRGL 437
           ML  GF P+ Y+   L  G+
Sbjct: 422 MLKHGFYPNTYTTYALAHGI 441



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 129/278 (46%), Gaps = 3/278 (1%)

Query: 269 RRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH 328
           R+ D A  L+++++    +PN  TY  LI+GF +      A S    ++S G  P+    
Sbjct: 4   RKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTM 63

Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV 388
           N L+  L ++G    AL ++  +     +P S +   LL    ++GR     K +    V
Sbjct: 64  NTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRAIEFFKEMKASGV 123

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
           E DL  Y+ LLS    +G   +A  L++ M     +PD  ++  L+ G C   +  EA +
Sbjct: 124 EPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQS 180

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           + + I+      N   ++ I++   +  +  +A ++F + I      + V++   I G  
Sbjct: 181 LMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFC 240

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
           + G  E+A  L+++M+ I       TY  ++ S CK+R
Sbjct: 241 KAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKR 278



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 99/227 (43%), Gaps = 14/227 (6%)

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
            YN L+  FCK G  +QAV +++ M   G  P+  +   LL GLC   ++  A+ +++ +
Sbjct: 27  TYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREM 86

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
                   +  H  ++     AGR   AI+ F+         D+ SY + +  L + GR 
Sbjct: 87  QAGPFLPTSASHNILLRGFFMAGR---AIEFFKEMKASGVEPDLESYHILLSALSDSGRM 143

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
            EA+ L+S M      P+  TY V++  +CK       + L+++++ A  E +  T   +
Sbjct: 144 AEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSII 200

Query: 574 TKFIFKFHSSSSAVNQLVEMCNLGLIPDEM--------WRKLGLLSD 612
                K      A    ++M     +P+ +        + K G+L D
Sbjct: 201 INCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLED 247



 Score = 48.1 bits (113), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 3/129 (2%)

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
           + A +  +A++LF+  +   +  +  +Y V IRG  +GG+  +A  ++S MK   + PNA
Sbjct: 1   MSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNA 60

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVE 592
            T   +LL  C+   +    +L +++          TS      +  F  +  A+    E
Sbjct: 61  STMNTLLLGLCEIGQMSSALKLFREMQAGPF---LPTSASHNILLRGFFMAGRAIEFFKE 117

Query: 593 MCNLGLIPD 601
           M   G+ PD
Sbjct: 118 MKASGVEPD 126



 Score = 45.4 bits (106), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 29/130 (22%), Positives = 61/130 (46%), Gaps = 2/130 (1%)

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
           ARK D+A+ +++ ++    A NAH +  ++    + G+ H+A+ +F          +  +
Sbjct: 3   ARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNAST 62

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS-FCKERNIKMVKRLLQDV 558
               + GL E G+   A  L+ +M+     P + ++ ++L   F   R I+  K +    
Sbjct: 63  MNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRAIEFFKEMKASG 122

Query: 559 IDARIELDYH 568
           ++  +E  YH
Sbjct: 123 VEPDLE-SYH 131


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 117/513 (22%), Positives = 216/513 (42%), Gaps = 43/513 (8%)

Query: 134 MYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK---ETQL-PNFLSFN 189
           M   V++ +  M   G  PN    N V++ L K G V     ++K   E+++ P+  ++ 
Sbjct: 365 MTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYT 424

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI-- 247
             +   C+ +D+ +   V   M ++G  PN   +  L+N  C  GR+ EA+ L+  MI  
Sbjct: 425 SMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILH 484

Query: 248 ---------------------------------TLGTSLSVNAWTVLIDGFRRLRRLDMA 274
                                              G   +V  +T LI G      L +A
Sbjct: 485 GILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVA 544

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
             L+ +M ++G  PN VTY +LI   +E +    AF  L+++   G   ++V +N +I  
Sbjct: 545 IGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKG 604

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEAD 391
              +G    A+ V + +L+     +  T+ +++   C SG  +   +++  +     + D
Sbjct: 605 YCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPD 664

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
              Y  L+  FCK      A  L+N M+D G  P+  ++  L+ G C   K+D A ++ +
Sbjct: 665 EWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLE 724

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
            +  +    N   +  ++  L +      A +L +  I E    +VV+YT  I GL + G
Sbjct: 725 HMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNG 784

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSI 571
            T  A  ++++M      PN  TY  ++ +  +E  ++  + L  ++    +  D  T +
Sbjct: 785 STSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYV 844

Query: 572 RLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMW 604
           ++ +          A N L  M   G  P  +W
Sbjct: 845 KMIEAYIMSGKVEHAFNFLGRMIKAGCQPT-LW 876



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 119/513 (23%), Positives = 207/513 (40%), Gaps = 42/513 (8%)

Query: 133 EMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR----VDLGIKVLKETQLPNFLSF 188
           E     +   D + + G     FA + ++  L ++G     +D   ++L E   PN L +
Sbjct: 329 EAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIY 388

Query: 189 NIALCNLCKLNDVSNVK-----------------------------------DVIGMMVR 213
           N  +  LCK  +V++ +                                    V   M +
Sbjct: 389 NAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAK 448

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +G  PN   +  L+N  C  GR+ EA+ L+  MI  G   + +  T  I     +   + 
Sbjct: 449 EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYED 508

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L+  M   GC PNV TYT+LI G   + +  +A      +  +G  P+ V +N LI+
Sbjct: 509 AWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALIN 568

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG---RFSLLPKLVCGLEVEA 390
            L +      A  V + +    L  +  T+  ++   C+ G   +  L+   +      A
Sbjct: 569 ILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSA 628

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           +LV YN ++  +C +G    A+++ + M D G  PD +S+  L+ G C   K++ A  ++
Sbjct: 629 NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLF 688

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
             +V +    N   +TA++D   +  +   A  L           +V +Y V I GL + 
Sbjct: 689 NEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQ 748

Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
                A  L   M    + PN  TY  M+   CK  +  +   +   +I+     +  T 
Sbjct: 749 NNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTY 808

Query: 571 IRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
             L + + +      A N   E+   GLIPDE+
Sbjct: 809 SSLIRALGQEGKVEEAENLFAELERHGLIPDEI 841



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 115/514 (22%), Positives = 227/514 (44%), Gaps = 57/514 (11%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G +E    +  ++   GC     T+   +       +  + +  F  M R G  PNT   
Sbjct: 504 GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTY 563

Query: 158 NIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N ++++L +  R+     VL    +     N +++N  +   C L D      V+  M++
Sbjct: 564 NALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQ 623

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +G   N+  +  ++  +C  G    A ++L LM   G      ++T LI GF ++ +++ 
Sbjct: 624 RGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMES 683

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L+ +MV +G  PN VTYT+LI G+ + +    A S L+ ++  G  P++  +NVLI 
Sbjct: 684 AFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIH 743

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLV 393
            L+K  ++  A ++   ++E  + P+  T+ +++  +C +G  SL               
Sbjct: 744 GLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSL--------------- 788

Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
                            A++++N M+++G  P+  ++  L+R L    K++EA N++  +
Sbjct: 789 -----------------ALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAEL 831

Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
             +    +   +  +++  I +G+   A     R I       + +Y V I+GL      
Sbjct: 832 ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL------ 885

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI-ELDYHTSIR 572
           +  Y+L  Q   +A  P+     V   SF      +   +    V+ A++ ELD   S++
Sbjct: 886 KNEYLLADQ--RLAALPDV----VPNCSF----GYQTTDQDAVSVMSAKLAELDPGLSVQ 935

Query: 573 LTKFIFKFHSSSS---AVNQLV-EMCNLGLIPDE 602
           +   +    S++      N+L+  M + GL PD+
Sbjct: 936 VQNALVSNLSTAGRWFEANELLGSMISQGLCPDQ 969



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 113/516 (21%), Positives = 216/516 (41%), Gaps = 32/516 (6%)

Query: 75   KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
            K +    +V ++  +IS +  ++G  +   G+   ++R G      T+   + I      
Sbjct: 517  KNKGCEPNVYTYTALISGLC-VSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRR 575

Query: 135  YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNI 190
                    + MGR G   N    N ++     +G     + V    L+     N +++N 
Sbjct: 576  IKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNT 635

Query: 191  ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
             +   C   + ++   ++ +M   G  P+   +  L+  FCK+ ++  A+ L   M+  G
Sbjct: 636  IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG 695

Query: 251  TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
               +   +T LIDG+ +  +LD A  L E M ++GC PNV TY  LI G  +   FS A 
Sbjct: 696  LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAE 755

Query: 311  SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
                ++  EG  P++V +  +ID L K GS   AL++++ ++E   +P+  T+ SL+  +
Sbjct: 756  ELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRAL 815

Query: 371  CLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
               G+      L   LE      D + Y  ++  +  +G    A      M+  G  P  
Sbjct: 816  GQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTL 875

Query: 428  YSFVGLLRGL--------------------C--GARKIDE-AINVYQGIVMN-NPAVNAH 463
            +++  L++GL                    C  G +  D+ A++V    +   +P ++  
Sbjct: 876  WTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQ 935

Query: 464  VHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM 523
            V  A+V  L  AGR  +A +L    I +    D  +Y   +  LL     + A  ++  M
Sbjct: 936  VQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHM 995

Query: 524  KHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
                   +   Y+ ++ + C+    K  +   ++++
Sbjct: 996  STQGCEVHLNGYKELICALCQLHRRKEARITFENML 1031



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/409 (23%), Positives = 181/409 (44%), Gaps = 12/409 (2%)

Query: 142  FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
            F+EM   G  PN      ++D   K  ++D    +L+  +     PN  ++N+ +  L K
Sbjct: 688  FNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTK 747

Query: 198  LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
             N+ S  +++  +M+ +G +PNV  +  +++  CK G  + A ++   MI  G   ++  
Sbjct: 748  QNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLT 807

Query: 258  WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
            ++ LI    +  +++ A  L+ ++ ++G  P+ +TY  +I+ ++ +     AF+FL  + 
Sbjct: 808  YSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMI 867

Query: 318  SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
              G  P L  + VLI  L       D          L  +PD    CS           S
Sbjct: 868  KAGCQPTLWTYGVLIKGLKNEYLLADQ--------RLAALPDVVPNCSFGYQTTDQDAVS 919

Query: 378  LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
            ++   +  L+    + V NAL+S    AG   +A +L  +M+ +G  PD  ++  LL  L
Sbjct: 920  VMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSL 979

Query: 438  CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
               R +D A+ V++ +      V+ + +  ++  L +  R  +A   F   ++  +  D 
Sbjct: 980  LRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDD 1039

Query: 498  VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
            V   V I GLL  G  +        M+     P+ + Y ++     K+R
Sbjct: 1040 VVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASKKR 1088


>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 755

 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 119/532 (22%), Positives = 220/532 (41%), Gaps = 47/532 (8%)

Query: 77  RDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYG 136
           R+   D  S++  I    R  G++E V G++ E+  VG    A T+   +    +   + 
Sbjct: 209 REVVPDEISYNSAIKACGR-GGQWERVIGLLREMPSVGLTPDAITYNSVITGCGKEGQWK 267

Query: 137 MVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIAL 192
             L    EM   G TP T + N+ +    + GR    ++VL++ +     P+ +S++ A+
Sbjct: 268 EALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAI 327

Query: 193 CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
                        D++  M  +G  PN   F   +    K G+  +A +LL  +  LG +
Sbjct: 328 KACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALGLT 387

Query: 253 LSVNAWTVLIDGFRRLRRLDMA----------------------------GYLWE----- 279
               ++   I    +  R   A                            G  WE     
Sbjct: 388 PDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALEL 447

Query: 280 --KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
             +M   G +PNV++    I+   E   +      L  + ++G  P+++ +N  I    K
Sbjct: 448 RRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGK 507

Query: 338 MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVV 394
            G ++ ALD+   + EL + PDS T+ S ++     GR+     L + + G  +  D++ 
Sbjct: 508 GGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVIS 567

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           Y A +  + K G   +AV+L   M  KG TP+  ++  +++      + ++A+++ + + 
Sbjct: 568 YTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELK 627

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
               A +   +   +    + GR  +A+ L R    E    DV+SYT AIR     G  E
Sbjct: 628 ETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRACNAEGEWE 687

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCK----ERNIKMVKRLLQDVIDAR 562
           +A  L + M    V P A +Y + + +  K    E  + +V+ + Q  +  R
Sbjct: 688 KALGLLNLMGAHGVSPTATSYSLAIEACGKGGRREEAVCLVREMAQRGLSHR 739



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 114/513 (22%), Positives = 216/513 (42%), Gaps = 44/513 (8%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMG-RFGFTPNTF 155
           TG++    GI+ E+ + G V+ A ++   +    R   +   LE   E+  + G +PN F
Sbjct: 123 TGKWREALGILDEM-KEGGVVCAHSYTTAITTCGRQGQWEKALELLREIPEQEGVSPNVF 181

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
             N  ++      + ++ + +L+E      +P+ +S+N A+    +      V  ++  M
Sbjct: 182 CYNSAIEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWERVIGLLREM 241

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
              G  P+   +  ++    K G+  EA  +L  M   G +    ++ + I    R  R 
Sbjct: 242 PSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRW 301

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
             A  +  +M   G +P+V++Y + IK       +  +   LD +   G AP+ +  N  
Sbjct: 302 KEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSA 361

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEV 388
           I    K G ++ A+++   +  L L PD+ +F S ++    SGR+     L K +    +
Sbjct: 362 IVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRL 421

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
           + D + YN+ +    K G    A++L   M  KG TP+                      
Sbjct: 422 KPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPN---------------------- 459

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
               ++ +N A+ A           E GR  + ++L R+   +    +V++Y  AI+   
Sbjct: 460 ----VISSNIAIRA---------CGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCG 506

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
           +GG+ E+A  L ++MK +A+ P++ TY   + +  K    K    LL+++    +  D  
Sbjct: 507 KGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVI 566

Query: 569 TSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           +         K      AV  L +M   GL P+
Sbjct: 567 SYTAAIDAYGKNGQWERAVELLRQMPTKGLTPN 599



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 152/355 (42%), Gaps = 8/355 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D  SF+  I+  T+ +GR++    ++ E+        A ++   +    +G  + M LE 
Sbjct: 389 DATSFNSAIAACTK-SGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALEL 447

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
             +M   G TPN  + NI +    + GR   G+++L++       PN +++N A+    K
Sbjct: 448 RRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGK 507

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
                   D++  M      P+   +   +    K GR  EA  LL  M   G +  V +
Sbjct: 508 GGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVIS 567

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T  ID + +  + + A  L  +M   G +PNV+TY S+IK       +  A   L  L+
Sbjct: 568 YTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELK 627

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
               APDL+ +N+ I    K G +++ALD+   +    L PD  ++ S +      G + 
Sbjct: 628 ETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRACNAEGEWE 687

Query: 378 L---LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
               L  L+    V      Y+  +    K G   +AV L   M  +G +  N S
Sbjct: 688 KALGLLNLMGAHGVSPTATSYSLAIEACGKGGRREEAVCLVREMAQRGLSHRNIS 742



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/223 (20%), Positives = 96/223 (43%), Gaps = 5/223 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D  +++  I+  ++  GR++    ++ E+   G      ++   +  Y +   +   +E 
Sbjct: 529 DSITYNSAIAACSK-RGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVEL 587

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
             +M   G TPN    N V+    + G  +  + +LKE +     P+ +S+N+A+    K
Sbjct: 588 LRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGK 647

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
                   D++  M  +G  P+V  +   +      G   +A  LL LM   G S +  +
Sbjct: 648 RGRWEEALDLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGAHGVSPTATS 707

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
           +++ I+   +  R + A  L  +M Q G S   ++ + +++  
Sbjct: 708 YSLAIEACGKGGRREEAVCLVREMAQRGLSHRNISNSLIVEAL 750


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 162/349 (46%), Gaps = 12/349 (3%)

Query: 136 GMVLEAFDEM----GRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-----PNFL 186
           G V  A D M     R G  PN +    V+    K+GRVD  +KV  E        P  +
Sbjct: 159 GRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAV 218

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
            +N  +   C    +         MV +G    V  + +L++     GR  EAY+L+  M
Sbjct: 219 MYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEM 278

Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
              G +  V  + +LI+G  +   +  A  ++E M + G    VVTYT+LI    +    
Sbjct: 279 GGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQV 338

Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
                  D     G  PDLV +N LI+  S  G+ D A ++   + + ++ PD  T+ +L
Sbjct: 339 QETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTL 398

Query: 367 LSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
           +  +CL GR     KL+  +    ++ DLV YN L+S +   G    A+++ N M++KGF
Sbjct: 399 MRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGF 458

Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
            P   ++  L++GLC   + D+A N+ + +V N    +   + ++++ L
Sbjct: 459 NPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 507



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/409 (22%), Positives = 189/409 (46%), Gaps = 5/409 (1%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDV 201
           F +M R      T   NI++  L   G+    +++L++   PN +++N  +   C    V
Sbjct: 102 FADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPRPNAVTYNTVIAGFCSRGRV 161

Query: 202 SNVKDVI-GMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG-TSLSVNAWT 259
               D++  M  R G  PN   +  +++ +CK+GR+ EA ++   M+T G        + 
Sbjct: 162 QAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYN 221

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
            LI G+    +LD A    ++MV+ G +  V TY  L+         + A+  ++ +  +
Sbjct: 222 ALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK 281

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
           G APD+  +N+LI+   K G+   AL++++ +    +     T+ +L+  +   G+    
Sbjct: 282 GLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQET 341

Query: 380 PKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
            KL        +  DLV+YNAL++    +G  ++A ++   M  K   PD+ ++  L+RG
Sbjct: 342 DKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRG 401

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
           LC   ++DEA  +   +       +   +  ++      G    A+++    + + +   
Sbjct: 402 LCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPT 461

Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
           +++Y   I+GL + G+ ++A  +  +M    + P+  TY  ++     E
Sbjct: 462 LLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 510



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 94/414 (22%), Positives = 177/414 (42%), Gaps = 21/414 (5%)

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           F I+L   C  G+ A A +LL  M       +   +  +I GF    R+  A  +  +M 
Sbjct: 117 FNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMREMR 172

Query: 283 Q-NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA-PDLVFHNVLIDCLSKMGS 340
           +  G +PN  TY ++I G+ +      A    D + ++G   P+ V +N LI      G 
Sbjct: 173 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 232

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV---CGLEVEADLVVYNA 397
            D AL   D ++E  +     T+  L+  + + GR +   +LV    G  +  D+  YN 
Sbjct: 233 LDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNI 292

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
           L++  CK G   +A++++  M  +G      ++  L+  L    ++ E   ++   V   
Sbjct: 293 LINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRG 352

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAY 517
              +  ++ A+++    +G   +A ++      ++   D V+Y   +RGL   GR +EA 
Sbjct: 353 IRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEAR 412

Query: 518 ILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFI 577
            L  +M    + P+  TY  ++  +  + ++K   R+  ++++        T   L + +
Sbjct: 413 KLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGL 472

Query: 578 FKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTPVSLFDGFVPCERRA 631
            K      A N + EM   G+ PD+             T +SL +G    + RA
Sbjct: 473 CKNGQGDDAENMVKEMVENGITPDD------------STYISLIEGLTTEDERA 514



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 125/278 (44%), Gaps = 10/278 (3%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFD---EMGRFGFTPNT 154
           G+ +T       +   G  +   T+ L +   +   M G   EA++   EMG  G  P+ 
Sbjct: 231 GKLDTALLYRDRMVERGVAMTVATYNLLVHALF---MDGRGTEAYELVEEMGGKGLAPDV 287

Query: 155 FARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGM 210
           F  NI+++   K G V   +++ +           +++   +  L K   V     +   
Sbjct: 288 FTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDE 347

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
            VR+G  P++ ++  L+N     G I  A++++G M     +     +  L+ G   L R
Sbjct: 348 AVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGR 407

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
           +D A  L ++M + G  P++VTY +LI G+        A    + + ++G  P L+ +N 
Sbjct: 408 VDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNA 467

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           LI  L K G  DDA ++   ++E  + PD  T+ SL+ 
Sbjct: 468 LIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIE 505



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/245 (21%), Positives = 102/245 (41%), Gaps = 4/245 (1%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           + GR      +V E+   G      T+ + +  + +       LE F+ M R G      
Sbjct: 264 MDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVV 323

Query: 156 ARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
               ++  L K G+V    K+  E       P+ + +N  + +     ++    +++G M
Sbjct: 324 TYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 383

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
            +K   P+   +  L+   C +GR+ EA +L+  M   G    +  +  LI G+     +
Sbjct: 384 EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDV 443

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
             A  +  +M+  G +P ++TY +LI+G  +      A + +  +   G  PD   +  L
Sbjct: 444 KDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISL 503

Query: 332 IDCLS 336
           I+ L+
Sbjct: 504 IEGLT 508


>gi|297844198|ref|XP_002889980.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335822|gb|EFH66239.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 517

 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 129/508 (25%), Positives = 219/508 (43%), Gaps = 43/508 (8%)

Query: 83  VQSFDHMISVVTRLTGRFETVRGIVGELAR-VGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           VQ FD M         R  + R    +  R +G ++K   F L   IY R  M       
Sbjct: 29  VQVFDEM---------RHSSYRVFSSDYNRFIGVLVKESRFELAEAIY-RDMM------- 71

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
              MG F   P T++R I    L K+ + +L   +L++ +    +P+  +FNI L  LC+
Sbjct: 72  --PMG-FSLIPFTYSRFI--SGLCKVKKFELIDALLRDMETLGFIPDIWAFNIYLDLLCR 126

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
            N V         MV++G  P+V  + IL+N   + G++ +A ++   MI  G S    A
Sbjct: 127 ENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKA 186

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNG-CSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
              L+ G    R++D+A  +  + +++     ++V Y +LI GF +A     A +    +
Sbjct: 187 CAALVVGLCHARKVDLAYEMVAEEIKSARVKLSIVVYNALISGFCKAGRIEKAEALKSFM 246

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR- 375
              G  PDLV +NVL++          A  V   ++   +  D+Y++  LL   C     
Sbjct: 247 SKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMTEMVRSGIQLDAYSYNQLLKRHCRVSHP 306

Query: 376 ---FSLL-----PKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
              +S +     P+  C      D+V Y+ L+  FC+A    +A KL+  M  KG   + 
Sbjct: 307 DRCYSFMLKEMEPRGFC------DVVSYSTLIETFCRASNTKKAYKLFEEMRQKGIVTNV 360

Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
            +F  L++          A  +   +     + +   +T I+D L ++G   KA  +F  
Sbjct: 361 VTFTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGIFND 420

Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN 547
            I  +   D +SY   I GL   GR  EA  L+  MK     P+  T++ ++    +E+ 
Sbjct: 421 MIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIREKK 480

Query: 548 IKMVKRLLQDVIDARIELDYHTSIRLTK 575
           +    ++   ++D    LD   S  L K
Sbjct: 481 LSAAYKVWDQMMDKGFTLDRDVSDTLIK 508



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 130/260 (50%), Gaps = 3/260 (1%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+ +++N+ L      N +   + V+  MVR G   +   +  LL   C++      Y  
Sbjct: 253 PDLVTYNVLLNYYYDNNMLKRAEGVMTEMVRSGIQLDAYSYNQLLKRHCRVSHPDRCYSF 312

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           +   +       V +++ LI+ F R      A  L+E+M Q G   NVVT+TSLIK F+ 
Sbjct: 313 MLKEMEPRGFCDVVSYSTLIETFCRASNTKKAYKLFEEMRQKGIVTNVVTFTSLIKAFLR 372

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
               S+A   LD +   G +PD +F+  ++D L K G+ D A  +++ ++E ++ PD+ +
Sbjct: 373 EGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEITPDAIS 432

Query: 363 FCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
           + SL+S +C SGR +   KL   + G E   D + +  ++    +    + A K+++ M+
Sbjct: 433 YNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIREKKLSAAYKVWDQMM 492

Query: 420 DKGFTPDNYSFVGLLRGLCG 439
           DKGFT D      L++  C 
Sbjct: 493 DKGFTLDRDVSDTLIKASCS 512



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 85/392 (21%), Positives = 169/392 (43%), Gaps = 6/392 (1%)

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGL 245
           L++   + NL K   + N   V   M    +      +   +    K  R   A  +   
Sbjct: 10  LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSSDYNRFIGVLVKESRFELAEAIYRD 69

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           M+ +G SL    ++  I G  ++++ ++   L   M   G  P++  +   +        
Sbjct: 70  MMPMGFSLIPFTYSRFISGLCKVKKFELIDALLRDMETLGFIPDIWAFNIYLDLLCRENK 129

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
              A      +   G  PD+V + +LI+ L + G   DA+++++ ++   + PD+    +
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAA 189

Query: 366 LLSTVCLSGRFSLLPKLVC----GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
           L+  +C + +  L  ++V        V+  +VVYNAL+S FCKAG   +A  L + M   
Sbjct: 190 LVVGLCHARKVDLAYEMVAEEIKSARVKLSIVVYNALISGFCKAGRIEKAEALKSFMSKI 249

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
           G  PD  ++  LL        +  A  V   +V +   ++A+ +  ++ R        + 
Sbjct: 250 GCEPDLVTYNVLLNYYYDNNMLKRAEGVMTEMVRSGIQLDAYSYNQLLKRHCRVSHPDRC 309

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
                + +  +   DVVSY+  I        T++AY L+ +M+   +  N  T+  ++ +
Sbjct: 310 YSFMLKEMEPRGFCDVVSYSTLIETFCRASNTKKAYKLFEEMRQKGIVTNVVTFTSLIKA 369

Query: 542 FCKERNIKMVKRLLQDVIDARIELD--YHTSI 571
           F +E N  + K+LL  + +  +  D  ++T+I
Sbjct: 370 FLREGNSSVAKKLLDQMTELGLSPDRIFYTTI 401



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 59/279 (21%), Positives = 118/279 (42%), Gaps = 4/279 (1%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
            GR E    +   ++++GC     T+ + L  Y+   M         EM R G   + ++
Sbjct: 233 AGRIEKAEALKSFMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMTEMVRSGIQLDAYS 292

Query: 157 RNIVMDVLFKIGRVDLGIK-VLKETQLPNF---LSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N ++    ++   D     +LKE +   F   +S++  +   C+ ++      +   M 
Sbjct: 293 YNQLLKRHCRVSHPDRCYSFMLKEMEPRGFCDVVSYSTLIETFCRASNTKKAYKLFEEMR 352

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
           +KG   NV  F  L+  F + G  + A +LL  M  LG S     +T ++D   +   +D
Sbjct: 353 QKGIVTNVVTFTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVD 412

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A  ++  M+++  +P+ ++Y SLI G   +   + A    + ++ +   PD +    +I
Sbjct: 413 KAYGIFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFII 472

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
             L +      A  V+D +++     D     +L+   C
Sbjct: 473 GGLIREKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511


>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 114/468 (24%), Positives = 212/468 (45%), Gaps = 13/468 (2%)

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCN 194
           Y  VL    +M   G  P+ F  +I+++    +G++     V  +          + LC 
Sbjct: 83  YPTVLSLSTQMESKGVKPDLFTLSILINCYCHLGQMTFAFSVFAKI-------LKMGLCL 135

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
             K+N+     D +  +   GF+ N   + IL+N  CKMG+   A Q+L  +     + +
Sbjct: 136 NGKVNEALLFHDHVLAL---GFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTN 192

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           V  ++ +IDG  + + +  A  L+ +M+     P VVT++SLI GF     F  AF   +
Sbjct: 193 VVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFN 252

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS- 373
            +  +   PD    N+L+D L K G   +A +V   +++  + P   T+ +L+   CL  
Sbjct: 253 EMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVN 312

Query: 374 --GRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
             G+   +  ++  + V  +   YN +++ FCK    ++A+ L++ M  +G  P   ++ 
Sbjct: 313 EVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYN 372

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            L+ GLC A +I  A  +   +  N    +   + +++D   +     KAI L ++    
Sbjct: 373 SLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEH 432

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
               ++ +Y + I GL +GG+ + A  ++  +       NA+TY +M+   CKE      
Sbjct: 433 GIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEA 492

Query: 552 KRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLI 599
           + LL  + D  I  D  T   + + +F    +  A   L EM   G++
Sbjct: 493 EVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGVV 540



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 111/453 (24%), Positives = 206/453 (45%), Gaps = 47/453 (10%)

Query: 121 TFLLFLRIYWRGE-MYGMVLEAF---DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV 176
            F +F +I   G  + G V EA    D +   GF  N     I+++ L K+G+    ++V
Sbjct: 121 AFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQV 180

Query: 177 LKETQLP----NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCK 232
           L++ +      N + ++  +  LCK   V++   +   M+ K   P V  F  L+  FC 
Sbjct: 181 LRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCI 240

Query: 233 MGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVT 292
           +G+  +A++L   M+    +     + +L+D   +  ++  A  +   M++ G  P VVT
Sbjct: 241 VGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVT 300

Query: 293 YTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
           Y +L+ G+        A   L ++     AP+   +N++I+   K+   D+AL ++  + 
Sbjct: 301 YNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMC 360

Query: 353 ELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPN 409
              + P   T+ SL+  +C +GR     +LV  +    + AD+V YN+L+  FCK    +
Sbjct: 361 CRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVD 420

Query: 410 QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
           +A+ L   + + G  P+  ++  L+ GLC   ++  A +V+Q +++    VNA       
Sbjct: 421 KAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAW------ 474

Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
                                        +Y + I GL + G  +EA +L S+M+   + 
Sbjct: 475 -----------------------------TYNIMINGLCKEGLFDEAEVLLSKMEDNGII 505

Query: 530 PNAYTYRVMLLS-FCKERNIKMVKRLLQDVIDA 561
           P+A TY  ++ + F K+ N K  K L + VI  
Sbjct: 506 PDAVTYETIIQALFHKDENEKAQKLLREMVIKG 538



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/446 (22%), Positives = 200/446 (44%), Gaps = 25/446 (5%)

Query: 181 QLPNFLSFNIALCNLCKL-NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEA 239
           Q P+ + FN  L  L K  N    V  +   M  KG  P++    IL+NC+C +G++  A
Sbjct: 62  QTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCYCHLGQMTFA 121

Query: 240 YQLLGLMITLGTSLS--VN-------------------AWTVLIDGFRRLRRLDMAGYLW 278
           + +   ++ +G  L+  VN                    + +LI+G  ++ +   A  + 
Sbjct: 122 FSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVL 181

Query: 279 EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
            ++     + NVV Y+++I G  + K+ + A+     +  +   P +V  + LI     +
Sbjct: 182 RQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIV 241

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVY 395
           G + DA  +++ ++   + PD+YTF  L+  +C  G+      ++  +    VE  +V Y
Sbjct: 242 GKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTY 301

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
           N L+  +C      +A  + + +      P++ S+  ++ G C  + +DEA+ ++  +  
Sbjct: 302 NTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCC 361

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
              A +   + +++D L +AGR   A +L         P D+V+Y   I    +    ++
Sbjct: 362 RGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDK 421

Query: 516 AYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTK 575
           A  L  ++K   + PN  TY +++   CK   +K  + + QD++     ++  T   +  
Sbjct: 422 AIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMIN 481

Query: 576 FIFKFHSSSSAVNQLVEMCNLGLIPD 601
            + K      A   L +M + G+IPD
Sbjct: 482 GLCKEGLFDEAEVLLSKMEDNGIIPD 507



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 149/300 (49%), Gaps = 8/300 (2%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+  +FNI +  LCK   +   K+VI +M+++G  P V  +  L++ +C +  + +A  +
Sbjct: 261 PDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHV 320

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
           L ++  +  + +  ++ ++I+GF +++ +D A  L+ +M   G +P+ VTY SLI G  +
Sbjct: 321 LSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCK 380

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
           A     A+  +D + +     D+V +N LID   K    D A+ +   + E  + P+  T
Sbjct: 381 AGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCT 440

Query: 363 FCSLLSTVCLSGRFSLLPK-----LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
           +  L+  +C  G+           L+ G  V A    YN +++  CK G  ++A  L + 
Sbjct: 441 YNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNA--WTYNIMINGLCKEGLFDEAEVLLSK 498

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNA-HVHTAIVDRLIEAG 476
           M D G  PD  ++  +++ L    + ++A  + + +V+    V A  +   +V R +  G
Sbjct: 499 MEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGVVVYAFEIRRTLVGRTLNLG 558



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 60/289 (20%), Positives = 121/289 (41%), Gaps = 32/289 (11%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D  +F+ ++  + +  G+ +  + ++  + + G      T+   +  Y      G     
Sbjct: 262 DAYTFNILVDALCK-EGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHV 320

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDV 201
              + R    PN+ + NI+++   KI  VD                   ALC        
Sbjct: 321 LSIISRMRVAPNSRSYNIMINGFCKIKMVDE------------------ALC-------- 354

Query: 202 SNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVL 261
                +   M  +G  P+   +  L++  CK GRI  A++L+  M        +  +  L
Sbjct: 355 -----LFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSL 409

Query: 262 IDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH 321
           ID F + + +D A  L +K+ ++G  PN+ TY  LI G  +      A      L  +G+
Sbjct: 410 IDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGY 469

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
             +   +N++I+ L K G +D+A  +   + +  ++PD+ T+ +++  +
Sbjct: 470 NVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQAL 518



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 64/270 (23%), Positives = 111/270 (41%), Gaps = 37/270 (13%)

Query: 392 LVVYNALLSYFCKAG--FPNQAVKLYNTMLDKGFTPDNYS-------------------- 429
           +V +N +L+Y  K    +P   + L   M  KG  PD ++                    
Sbjct: 66  IVEFNKILTYLIKTKNHYPT-VLSLSTQMESKGVKPDLFTLSILINCYCHLGQMTFAFSV 124

Query: 430 FVGLLR-GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
           F  +L+ GLC   K++EA+  +  ++     +N   +  +++ L + G+   A+Q+ R+ 
Sbjct: 125 FAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQI 184

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
             +    +VV Y+  I GL +     +AY LYS+M    +PP   T+  ++  FC     
Sbjct: 185 EGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKF 244

Query: 549 KMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLG 608
           K   RL  +++   I  D +T   L   + K      A N +  M   G+ P        
Sbjct: 245 KDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPT------- 297

Query: 609 LLSDETMTPVSLFDGFVPCERRAGNANHLL 638
                 +T  +L DG+       G A H+L
Sbjct: 298 -----VVTYNTLMDGYCLVN-EVGKAKHVL 321


>gi|357460285|ref|XP_003600424.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489472|gb|AES70675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 393

 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 91/353 (25%), Positives = 171/353 (48%), Gaps = 17/353 (4%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC------------- 229
           P+ + +N  +  LCK   VS+  D+   M+ K  YP+V  +  L+               
Sbjct: 37  PDVVMYNTIIDILCKDKLVSDGCDLYSEMIDKKIYPDVVTYNTLIYSLLNFVYIKIRKEY 96

Query: 230 -FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSP 288
            F  +G++ EA  LL  M +   + ++  +T L+DG  +   +  A  +   M++    P
Sbjct: 97  GFSILGQMKEAVGLLNQMTSKTVTPNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVEP 156

Query: 289 NVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVY 348
           N+VTY SL+ G+   K  + A    + +   G  P++  + V+I+ L K    D+A +++
Sbjct: 157 NIVTYNSLMDGYFLVKEVNKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLF 216

Query: 349 DGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE---ADLVVYNALLSYFCKA 405
             +    +VPD+  + SL+  +C S R   +   +  +      A+++ YN+LL   CK 
Sbjct: 217 KEMHSKNMVPDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCKN 276

Query: 406 GFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVH 465
              ++A+ L   + ++G  P+ Y++  L+ GLC   ++ +A  VYQ ++     ++A ++
Sbjct: 277 HQVDKAITLLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDARIY 336

Query: 466 TAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
           T +++ L + G   +A+ L  +    K   D V+Y + IR L E  R E  YI
Sbjct: 337 TVMINGLCKEGFLDEALSLLSKMEDNKCTPDGVTYEITIRALFESDRNEILYI 389



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 131/262 (50%), Gaps = 3/262 (1%)

Query: 179 ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAE 238
           +T  PN  +F   +  LCK  +V   ++V+ +M+++   PN+  +  L++ +  +  + +
Sbjct: 117 KTVTPNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLMDGYFLVKEVNK 176

Query: 239 AYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIK 298
           A QL   +   G + +V ++ V+I+G  + + +D A  L+++M      P+ V Y SLI 
Sbjct: 177 AKQLFNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLID 236

Query: 299 GFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP 358
           G  +++     + F+  +   G   +++ +N L+D L K    D A+ +   +    + P
Sbjct: 237 GLCKSRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRP 296

Query: 359 DSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLY 415
           + YT+  L+  +C +GR     ++   L     + D  +Y  +++  CK GF ++A+ L 
Sbjct: 297 NIYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDARIYTVMINGLCKEGFLDEALSLL 356

Query: 416 NTMLDKGFTPDNYSFVGLLRGL 437
           + M D   TPD  ++   +R L
Sbjct: 357 SKMEDNKCTPDGVTYEITIRAL 378



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/297 (22%), Positives = 143/297 (48%), Gaps = 17/297 (5%)

Query: 287 SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL----------- 335
            P+VV Y ++I    + K+ S        +  +   PD+V +N LI  L           
Sbjct: 36  KPDVVMYNTIIDILCKDKLVSDGCDLYSEMIDKKIYPDVVTYNTLIYSLLNFVYIKIRKE 95

Query: 336 ---SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVE 389
              S +G   +A+ + + +    + P+  TF +L+  +C  G       ++  +    VE
Sbjct: 96  YGFSILGQMKEAVGLLNQMTSKTVTPNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVE 155

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            ++V YN+L+  +      N+A +L+NT+  +G TP+  S+  ++ GLC  + +DEA N+
Sbjct: 156 PNIVTYNSLMDGYFLVKEVNKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANL 215

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
           ++ +   N   +   + +++D L ++ R +              P ++++Y   + GL +
Sbjct: 216 FKEMHSKNMVPDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCK 275

Query: 510 GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
             + ++A  L +++K+  + PN YTY +++   CK   ++  + + QD+++   +LD
Sbjct: 276 NHQVDKAITLLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQLD 332



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/316 (23%), Positives = 141/316 (44%), Gaps = 20/316 (6%)

Query: 277 LWEKMVQNGCSPNVVTYTSLIK---GFMEAKM-----FSI------AFSFLDMLESEGHA 322
           L+ +M+     P+VVTY +LI     F+  K+     FSI      A   L+ + S+   
Sbjct: 61  LYSEMIDKKIYPDVVTYNTLIYSLLNFVYIKIRKEYGFSILGQMKEAVGLLNQMTSKTVT 120

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL 382
           P++     L+D L K G    A +V   +++ ++ P+  T+ SL+    L    +   +L
Sbjct: 121 PNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQL 180

Query: 383 VCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
              + +     ++  Y  +++  CK    ++A  L+  M  K   PD  ++  L+ GLC 
Sbjct: 181 FNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCK 240

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
           +R+I +  +    +       N   + +++D L +  +  KAI L  +   +    ++ +
Sbjct: 241 SRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYT 300

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
           YT+ + GL + GR  +A  +Y  + +     +A  Y VM+   CKE  +     LL  + 
Sbjct: 301 YTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDARIYTVMINGLCKEGFLDEALSLLSKME 360

Query: 560 DARIELD---YHTSIR 572
           D +   D   Y  +IR
Sbjct: 361 DNKCTPDGVTYEITIR 376



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 121/279 (43%), Gaps = 18/279 (6%)

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL 382
           PD+V +N +ID L K     D  D+Y  +++ K+ PD  T+ +L+        +SLL  +
Sbjct: 37  PDVVMYNTIIDILCKDKLVSDGCDLYSEMIDKKIYPDVVTYNTLI--------YSLLNFV 88

Query: 383 VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
              +  E            F   G   +AV L N M  K  TP+  +F  L+ GLC   +
Sbjct: 89  YIKIRKEYG----------FSILGQMKEAVGLLNQMTSKTVTPNIRTFTTLVDGLCKDGE 138

Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTV 502
           + +A NV   ++      N   + +++D        +KA QLF    +     +V SY V
Sbjct: 139 VKKARNVLAIMIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQLFNTISLRGMTPNVRSYKV 198

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
            I GL +    +EA  L+ +M    + P+   Y  ++   CK R I  V   + ++ D  
Sbjct: 199 MINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRG 258

Query: 563 IELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
              +  T   L   + K H    A+  L ++ N G+ P+
Sbjct: 259 QPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPN 297



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 102/232 (43%), Gaps = 4/232 (1%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDV 207
           PN    N +MD  F +  V+   ++     L    PN  S+ + +  LCK   V    ++
Sbjct: 156 PNIVTYNSLMDGYFLVKEVNKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANL 215

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
              M  K   P+   +  L++  CK  RI + +  +G M   G   ++  +  L+DG  +
Sbjct: 216 FKEMHSKNMVPDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCK 275

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
             ++D A  L  K+   G  PN+ TYT L+ G  +      A      L ++G+  D   
Sbjct: 276 NHQVDKAITLLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDARI 335

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
           + V+I+ L K G  D+AL +   + + K  PD  T+   +  +  S R  +L
Sbjct: 336 YTVMINGLCKEGFLDEALSLLSKMEDNKCTPDGVTYEITIRALFESDRNEIL 387



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 90/184 (48%), Gaps = 7/184 (3%)

Query: 137 MVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFN 189
           MV EA   F EM      P+T A N ++D L K  R+    D   ++    Q  N +++N
Sbjct: 208 MVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANIITYN 267

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
             L  LCK + V     ++  +  +G  PN+  + IL++  CK GR+ +A ++   ++  
Sbjct: 268 SLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNK 327

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           G  L    +TV+I+G  +   LD A  L  KM  N C+P+ VTY   I+   E+    I 
Sbjct: 328 GYQLDARIYTVMINGLCKEGFLDEALSLLSKMEDNKCTPDGVTYEITIRALFESDRNEIL 387

Query: 310 FSFL 313
           + F+
Sbjct: 388 YIFI 391



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 94/200 (47%), Gaps = 4/200 (2%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNL 195
           + F+ +   G TPN  +  ++++ L K   VD    + KE      +P+ +++N  +  L
Sbjct: 179 QLFNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGL 238

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
           CK   + +V D IG M  +G   N+  +  LL+  CK  ++ +A  LL  +   G   ++
Sbjct: 239 CKSRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNI 298

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
             +T+L+DG  +  RL  A  +++ ++  G   +   YT +I G  +      A S L  
Sbjct: 299 YTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDARIYTVMINGLCKEGFLDEALSLLSK 358

Query: 316 LESEGHAPDLVFHNVLIDCL 335
           +E     PD V + + I  L
Sbjct: 359 MEDNKCTPDGVTYEITIRAL 378


>gi|297797613|ref|XP_002866691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312526|gb|EFH42950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 638

 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 101/418 (24%), Positives = 191/418 (45%), Gaps = 46/418 (11%)

Query: 46  IILAPHIVHSTLLNC-PSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVR 104
           + L P ++   L  C  +  +   FF+W AKQ  Y H ++ +  M+ +++++  +F  V 
Sbjct: 110 VELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMR-QFGAVW 168

Query: 105 GIVGELARVGC-VIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDV 163
           G++ E+ +    +I+ + F++ ++ +   +M    +E  DEM  FG  P+ +    ++D 
Sbjct: 169 GLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPTFGLEPDEYVFGCLLDA 228

Query: 164 LFKIGRVDLGIKVLKETQLP---NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV 220
           L K G V    K+ ++ +L    N   F   L   C+   +   K V+  M   GF P++
Sbjct: 229 LCKHGSVKDAAKLFEDMRLRFPVNLRYFTSLLYGWCREEKMMEAKYVLVQMKEAGFEPDI 288

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
             +  LL+ +   G++A+AY LL  M   G   +   +TVLI    ++ R++ A  ++ +
Sbjct: 289 VDYTNLLSGYANAGKMADAYDLLKDMRRRGFEPNATCYTVLIQALCKVDRMEEAMKVFVE 348

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           M +  C  +VVTYT+L+ GF                                    K G 
Sbjct: 349 MERYECEADVVTYTALVSGF-----------------------------------CKWGK 373

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYN 396
            D    V D +++  L+P   T+  +++      +      L+ K+   +E   D+ +YN
Sbjct: 374 IDKCYLVLDDMIKKGLMPSQLTYMHIMAAHEKKEKLIECLELMEKMK-QIEYHPDIGIYN 432

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
            ++   CK G   +AV+L+N M   G +P   +FV ++ GL     + EA + ++ +V
Sbjct: 433 VVIRLACKLGEVKEAVRLWNEMEGNGLSPGADTFVIIINGLTSQGCLLEACDHFKEMV 490



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/327 (22%), Positives = 147/327 (44%), Gaps = 16/327 (4%)

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
           ++W       C  ++  Y S++K   + + F   +  ++ +  E   P L+   + +  +
Sbjct: 135 FVWAAKQPRYCH-SIEVYKSMVKILSKMRQFGAVWGLIEEMRKEN--PQLIEPELFVVLV 191

Query: 336 SKMGSYD---DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE--A 390
            +  S D    A++V D +    L PD Y F  LL  +C  G      KL   + +    
Sbjct: 192 QRFASADMVKKAIEVLDEMPTFGLEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRLRFPV 251

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
           +L  + +LL  +C+     +A  +   M + GF PD   +  LL G   A K+ +A ++ 
Sbjct: 252 NLRYFTSLLYGWCREEKMMEAKYVLVQMKEAGFEPDIVDYTNLLSGYANAGKMADAYDLL 311

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP--LDVVSYTVAIRGLL 508
           + +       NA  +T ++  L +  R  +A+++F    +E+Y    DVV+YT  + G  
Sbjct: 312 KDMRRRGFEPNATCYTVLIQALCKVDRMEEAMKVF--VEMERYECEADVVTYTALVSGFC 369

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
           + G+ ++ Y++   M    + P+  TY  M +    E+  K+++ L  ++++   +++YH
Sbjct: 370 KWGKIDKCYLVLDDMIKKGLMPSQLTY--MHIMAAHEKKEKLIECL--ELMEKMKQIEYH 425

Query: 569 TSIRLTKFIFKFHSSSSAVNQLVEMCN 595
             I +   + +       V + V + N
Sbjct: 426 PDIGIYNVVIRLACKLGEVKEAVRLWN 452



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/313 (23%), Positives = 133/313 (42%), Gaps = 13/313 (4%)

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVT---YTSLIKGFMEAKMFSIAF 310
           S+  +  ++    ++R+      L E+M +   +P ++    +  L++ F  A M   A 
Sbjct: 147 SIEVYKSMVKILSKMRQFGAVWGLIEEMRKE--NPQLIEPELFVVLVQRFASADMVKKAI 204

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
             LD + + G  PD      L+D L K GS  DA  +++ +  L+   +   F SLL   
Sbjct: 205 EVLDEMPTFGLEPDEYVFGCLLDALCKHGSVKDAAKLFEDM-RLRFPVNLRYFTSLLYGW 263

Query: 371 C-----LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
           C     +  ++ L+     G E   D+V Y  LLS +  AG    A  L   M  +GF P
Sbjct: 264 CREEKMMEAKYVLVQMKEAGFE--PDIVDYTNLLSGYANAGKMADAYDLLKDMRRRGFEP 321

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           +   +  L++ LC   +++EA+ V+  +       +   +TA+V    + G+  K   + 
Sbjct: 322 NATCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYLVL 381

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
              I +      ++Y   +    +  +  E   L  +MK I   P+   Y V++   CK 
Sbjct: 382 DDMIKKGLMPSQLTYMHIMAAHEKKEKLIECLELMEKMKQIEYHPDIGIYNVVIRLACKL 441

Query: 546 RNIKMVKRLLQDV 558
             +K   RL  ++
Sbjct: 442 GEVKEAVRLWNEM 454



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/216 (23%), Positives = 92/216 (42%), Gaps = 3/216 (1%)

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
           +E +L V   L+  F  A    +A+++ + M   G  PD Y F  LL  LC    + +A 
Sbjct: 182 IEPELFV--VLVQRFASADMVKKAIEVLDEMPTFGLEPDEYVFGCLLDALCKHGSVKDAA 239

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            +++ + +  P VN    T+++       +  +A  +  +     +  D+V YT  + G 
Sbjct: 240 KLFEDMRLRFP-VNLRYFTSLLYGWCREEKMMEAKYVLVQMKEAGFEPDIVDYTNLLSGY 298

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
              G+  +AY L   M+     PNA  Y V++ + CK   ++   ++  ++     E D 
Sbjct: 299 ANAGKMADAYDLLKDMRRRGFEPNATCYTVLIQALCKVDRMEEAMKVFVEMERYECEADV 358

Query: 568 HTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
            T   L     K+         L +M   GL+P ++
Sbjct: 359 VTYTALVSGFCKWGKIDKCYLVLDDMIKKGLMPSQL 394


>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
          Length = 784

 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 133/563 (23%), Positives = 236/563 (41%), Gaps = 83/563 (14%)

Query: 85  SFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDE 144
           +++ ++ V +++   ++ V  +V  +   G      T+   +    R  +Y    + FDE
Sbjct: 209 TYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDE 268

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNV 204
           M   GF P+    N ++DV  K  R D  I+V++E                         
Sbjct: 269 MKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQE------------------------- 303

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
                 M R G  P+V  +  L++ + K G + +A  L   M   G    V  +T LI G
Sbjct: 304 ------MERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISG 357

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
             R  ++D A   +++MV+NGC PN+ TY +LIK       F    +  D L S G  PD
Sbjct: 358 LDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPD 417

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL---LPK 381
           +V  N L+    + G   +   V+  + +   +P+  T+ SL+S+    G F L   + K
Sbjct: 418 IVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYK 477

Query: 382 LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
            +    +  D+  YNA+LS   + G   QA KL+  M ++   PD YS+  LL     A+
Sbjct: 478 RMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAK 537

Query: 442 KIDE----AINVY-----------QGIVMNNPAVN--AHVHTAIVDRLIEAGRCHKAIQL 484
           ++D+    + ++Y           + +V+ N  VN  A    A ++  +   RC   I +
Sbjct: 538 RLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLE--LRQKRCSLDINV 595

Query: 485 FRRAI-----------VEK---------YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
               +           VEK           L   +Y   +      G  E+   + +++K
Sbjct: 596 LNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIK 655

Query: 525 HIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF-KFHSS 583
              V P+ Y+Y  ++ ++ ++  +K   RL  ++  + ++ D      +T  IF K + S
Sbjct: 656 SSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDV-----VTYNIFVKSYVS 710

Query: 584 SSAVNQLVE----MCNLGLIPDE 602
           +S   + +E    M   G  P+E
Sbjct: 711 NSMFEEAIELVRYMVTQGCKPNE 733



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 95/519 (18%), Positives = 192/519 (36%), Gaps = 45/519 (8%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           K+     D  +++ +IS   R    ++    +  E+   G      TF   L +Y +   
Sbjct: 235 KEHGVAPDRYTYNTLISCCRR-RALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARR 293

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNI 190
           +   +E   EM R G  P+    N ++    K G ++  + + +E ++    P+ +++  
Sbjct: 294 HDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTT 353

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            +  L +   +         MVR G  PN+  +  L+      G+  E   +   + + G
Sbjct: 354 LISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAG 413

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
               +  W  L+  F +         ++++M + G  P   TY SLI  +    +F +A 
Sbjct: 414 FVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAM 473

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
                +   G  PD+  +N ++  L++ G ++ A  ++  + E    PD Y++ SLL   
Sbjct: 474 QIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAY 533

Query: 371 CLSGRFSLLPKLVCGLEVEA--------------------------------------DL 392
             + R   +  L   +  E                                       D+
Sbjct: 534 ANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDI 593

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
            V NA++S + K     +  K+ + M +        ++  L+         ++  N+   
Sbjct: 594 NVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTE 653

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           I  +    + + +  ++      G+  +A +LF          DVV+Y + ++  +    
Sbjct: 654 IKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSM 713

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
            EEA  L   M      PN  TY  ++  +C  RN K+ 
Sbjct: 714 FEEAIELVRYMVTQGCKPNERTYNSIVEGYC--RNGKLT 750



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 89/376 (23%), Positives = 147/376 (39%), Gaps = 41/376 (10%)

Query: 268 LRRLDMAGYLWEK--MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS-FLDMLES------ 318
           +R +  AG L E   ++     P+   YT+L+  F  A  F  A + F  M++S      
Sbjct: 148 IRVMARAGRLAEASALLDAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAI 207

Query: 319 -----------------------------EGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
                                         G APD   +N LI C  +   Y +A  V+D
Sbjct: 208 VTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFD 267

Query: 350 GLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAG 406
            +      PD  TF SLL     + R     +++  +E       +V YN+L+S + K G
Sbjct: 268 EMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDG 327

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
              QAV L   M  KG  PD  ++  L+ GL  A KID AI  Y  +V N    N   + 
Sbjct: 328 LLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYN 387

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
           A++      G+  + + +F       +  D+V++   +    + G   E   ++ +MK  
Sbjct: 388 ALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKA 447

Query: 527 AVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSA 586
              P   TY  ++ S+ +     +  ++ + +++A I  D  T   +   + +      A
Sbjct: 448 GYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQA 507

Query: 587 VNQLVEMCNLGLIPDE 602
                EM      PDE
Sbjct: 508 EKLFAEMEERDCKPDE 523



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 83/406 (20%), Positives = 168/406 (41%), Gaps = 16/406 (3%)

Query: 132 GEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLS 187
           G++   ++E +DEM R G  PN    N ++ +    G+    + V  E +    +P+ ++
Sbjct: 362 GKIDAAIVE-YDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVT 420

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           +N  L    +    S V  V   M + G+ P    +  L++ + + G    A Q+   M+
Sbjct: 421 WNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMM 480

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
             G    V+ +  ++    R  R + A  L+ +M +  C P+  +Y+SL+  +  AK   
Sbjct: 481 EAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLD 540

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL-DVYDGLLELKLVPDSYTFCSL 366
              +  D + SE   P    HN L+  L  + S  + L +     LEL+    S     L
Sbjct: 541 KMKALSDDIYSERIEP----HNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVL 596

Query: 367 LSTVCLSGRFSLLPKL--VCGLEVEADL----VVYNALLSYFCKAGFPNQAVKLYNTMLD 420
            + V + G+  ++ K+  +  L  E+ +      YN+L+  + + G   +   +   +  
Sbjct: 597 NAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKS 656

Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
            G  PD YS+  ++       ++ EA  ++  +  +    +   +   V   +      +
Sbjct: 657 SGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEE 716

Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
           AI+L R  + +    +  +Y   + G    G+  +A I  S +  +
Sbjct: 717 AIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFVSNLPQL 762



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 61/339 (17%), Positives = 138/339 (40%), Gaps = 14/339 (4%)

Query: 75  KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
           K+  Y  +  ++  +IS  +R  G F+    I   +   G      T+   L    RG  
Sbjct: 445 KKAGYIPERDTYVSLISSYSR-CGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGR 503

Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD----LGIKVLKETQLP-NFLSFN 189
           +    + F EM      P+ ++ + ++       R+D    L   +  E   P N+L   
Sbjct: 504 WEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKT 563

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
           + L N  K+N+++  +     + +K    ++ +   +++ + K   + +  ++L LM   
Sbjct: 564 LVLVN-SKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKES 622

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
             +LS   +  L+  + RL   +    +  ++  +G  P+  +Y ++I  +        A
Sbjct: 623 AINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEA 682

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
                 ++  G  PD+V +N+ +        +++A+++   ++     P+  T+ S++  
Sbjct: 683 SRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEG 742

Query: 370 VCLSGRF-------SLLPKLVCGLEVEADLVVYNALLSY 401
            C +G+        S LP+L  G   +    ++  L  Y
Sbjct: 743 YCRNGKLTDAKIFVSNLPQLHPGYSKQEQQNLFEVLAKY 781


>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
 gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
          Length = 695

 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 105/420 (25%), Positives = 195/420 (46%), Gaps = 21/420 (5%)

Query: 132 GEMYGMVLEAF----DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE----TQLP 183
           G + G  LEA     D+M + G  PN    N+++  L + GR+D    ++ E    + LP
Sbjct: 239 GHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLP 298

Query: 184 NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
           +  +++I    L +  D   +  + G  ++KG         ILLN  CK G++A+A Q+L
Sbjct: 299 DGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVL 358

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
            +++  G   +   +  LI+G+ ++R L  A  ++E+M      P+ +TY +LI G  + 
Sbjct: 359 EMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKM 418

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
           +M + A   +  +E  G  P +   N LID   + G  +    V   + +  +  +  +F
Sbjct: 419 EMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISF 478

Query: 364 CSLLSTVCLSGRFSLLPKLVCGLE--VEADLV----VYNALLSYFCKAGFPNQAVKLYNT 417
            S++   C +G+   +P+ V  L+  +  D+V    VYN+++  + ++G   QA  L   
Sbjct: 479 GSVVKAFCKNGK---IPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEK 535

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           M   G +   +++  LL+GLC   +IDEA  +   +       +   +  I+      G 
Sbjct: 536 MKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGD 595

Query: 478 CHKAIQLFRRAIVEKYPL--DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
             +A++L +   + KY +   + +Y   +  L   GR  +   LY  M H  V P++  Y
Sbjct: 596 TDRALELLQE--MHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIY 653



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 93/433 (21%), Positives = 190/433 (43%), Gaps = 36/433 (8%)

Query: 130 WRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV----LKETQLPNF 185
           WR       L+ FDEM   G  PN    N ++D   K G ++ G ++    L++ + PN 
Sbjct: 206 WRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNV 265

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGL 245
           +++N+ L  LC+   +   + ++  M      P+   + IL +   + G       L G 
Sbjct: 266 VTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGE 325

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
            +  G  +     ++L++G  +  ++  A  + E +V  G  P    Y +LI G+ + + 
Sbjct: 326 SLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRD 385

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
              AFS  + ++S    PD + +N LI+                GL +++++ ++     
Sbjct: 386 LQGAFSIFEQMKSRHIRPDHITYNALIN----------------GLCKMEMITEAE---D 426

Query: 366 LLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
           L+  +  SG             V+  +  +N L+  + +AG   +   + + M DKG   
Sbjct: 427 LVMEMEKSG-------------VDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKS 473

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           +  SF  +++  C   KI EA+ +   ++  +   NA V+ +I+D  IE+G   +A  L 
Sbjct: 474 NVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLV 533

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
            +         + +Y + ++GL +  + +EA  L   + +  + P+  +Y  ++ + C +
Sbjct: 534 EKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNK 593

Query: 546 RNIKMVKRLLQDV 558
            +      LLQ++
Sbjct: 594 GDTDRALELLQEM 606



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 102/466 (21%), Positives = 206/466 (44%), Gaps = 23/466 (4%)

Query: 152 PNTFARNIVMDVLFKIGR-----VDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKD 206
           P+  + N++++ L  +GR        G+ V    + P+  ++N A+       D+    +
Sbjct: 121 PSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGAR-PDTFAWNKAVQACVAAGDLD---E 176

Query: 207 VIGMMVRKGFY-----PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVL 261
            + M+ R G       P+   + +++    + G+ ++A ++   M+  G + +   +  +
Sbjct: 177 ALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTM 236

Query: 262 IDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH 321
           IDG  +   L+    L ++M+Q+G  PNVVTY  L+ G   A       + +D + S   
Sbjct: 237 IDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSM 296

Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPK 381
            PD   +++L D L++ G     L ++   L+  ++  +YT   LL+ +C  G+ +   +
Sbjct: 297 LPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQ 356

Query: 382 LVCGLEVEADLV----VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
           ++  L V   LV    +YN L++ +C+      A  ++  M  +   PD+ ++  L+ GL
Sbjct: 357 VLEML-VHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGL 415

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHT--AIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
           C    I EA ++   + M    V+  V T   ++D    AG+  K   +      +    
Sbjct: 416 CKMEMITEAEDLV--MEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKS 473

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
           +V+S+   ++   + G+  EA  +   M H  V PNA  Y  ++ ++ +    +    L+
Sbjct: 474 NVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLV 533

Query: 556 QDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           + +  + +     T   L K + K      A   +  + N GL PD
Sbjct: 534 EKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPD 579


>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
 gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
          Length = 796

 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 100/433 (23%), Positives = 201/433 (46%), Gaps = 17/433 (3%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE-----TQLPNFLSFNIALCN 194
           +AF E+   G +P+    +I+++ L   G++D+  KV  E     T  P+  ++   +  
Sbjct: 161 DAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAMIKA 220

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           LC+  ++     ++  + R G  P V  + +L++  CK GR+ EA++L G M+      S
Sbjct: 221 LCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPS 280

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           +  + +LI G  R ++    G + ++M   G +PN V Y  +I         S A    D
Sbjct: 281 IVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFD 340

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL-- 372
            + S+G    +V +N++   L K G  + A  + D +L   ++      CSL ++V    
Sbjct: 341 EMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMM----VHCSLFNSVVAWH 396

Query: 373 ---SGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
              +GR  L+ +L+  +    ++ +  +  A +   CK+G   +A +++  +L KG   +
Sbjct: 397 LRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVN 456

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
             +   L+ GLC    + EA  V + +V +   ++   +  ++    +A +  +AIQL  
Sbjct: 457 VATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRD 516

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
             I   +  D+ ++ + +      G+ EE   L  QMK   + P+  TY  ++  +CK +
Sbjct: 517 DMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAK 576

Query: 547 NIKMVKRLLQDVI 559
           ++      L +++
Sbjct: 577 DMHKANEYLTELM 589



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/478 (21%), Positives = 206/478 (43%), Gaps = 8/478 (1%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           +GR E    + G +          TF + +    RG+ +G V     EM  FG TPN   
Sbjct: 259 SGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVI 318

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQLPNF----LSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N ++    + G     +K+  E          +++N+    LCK  ++ + + ++  M+
Sbjct: 319 YNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEML 378

Query: 213 RKGFYPNVRMFEILLNCFCK-MGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
             G   +  +F  ++    +  GR+    +L+  M+      +    T  I    +  + 
Sbjct: 379 LAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKH 438

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           + A  +W +++  G   NV T  +LI G  +      A   L  + + G   D + +N++
Sbjct: 439 EEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIM 498

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA- 390
           I    K    D+A+ + D +++    PD +TF   L T C  G+   +  L+  ++ E  
Sbjct: 499 IQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGL 558

Query: 391 --DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
             D+V Y  ++  +CKA   ++A +    ++  G  P+   +  L+ G      I +AI 
Sbjct: 559 KPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIG 618

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           +   +  N        + +++  +  AG   +   +F + IV+   L V+ YT+ I+G  
Sbjct: 619 ILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFC 678

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           + G+ +EA + + +M    +PPN  TY  ++ ++ K  N +   +L  +++   I  D
Sbjct: 679 KIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPD 736



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 94/417 (22%), Positives = 179/417 (42%), Gaps = 24/417 (5%)

Query: 61  PSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLT--------------GRFETVRGI 106
           P+++I      W  ++      ++ FD M+S   + T              G  E    I
Sbjct: 314 PNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKI 373

Query: 107 VGELARVGCVIKAQTFLLFLRIYWRGE-MYGMVLEAFDEM-GRFGFTPNTFARNIVMDVL 164
           + E+   G ++    F   +  + RG     +VL    EM  RF   PN       +  L
Sbjct: 374 LDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARF-LKPNDALMTACIQEL 432

Query: 165 FKIGR----VDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV 220
            K G+     ++  +VL +    N  + N  +  LC+ N++     V+  MV  G   + 
Sbjct: 433 CKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDR 492

Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
             + I++   CK  ++ EA QL   MI  G    +  + + +  +  L +++   +L ++
Sbjct: 493 ITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQ 552

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           M   G  P++VTY ++I G+ +AK    A  +L  L   G  P+ V +N LI    + G+
Sbjct: 553 MKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGN 612

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNA 397
             DA+ + D +    + P   T+ SL+  +C +G    +  +       ++E  ++ Y  
Sbjct: 613 ISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTI 672

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           ++  FCK G  ++AV  +  M  +G  P+  ++  L+     +   +EA  ++  +V
Sbjct: 673 IIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMV 729


>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
          Length = 761

 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 104/467 (22%), Positives = 208/467 (44%), Gaps = 16/467 (3%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGI------KVLKETQLPNFLSFNIALCNLCKLNDVS 202
           G  P+  +   V++  FK G  D G       ++L     P+ ++++  +  LCK   + 
Sbjct: 191 GSAPDVVSYTTVINGFFKEG--DSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMD 248

Query: 203 NVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS-----VNA 257
              +V+  MV+ G  PN R +  +++ +C  G+  EA   L  + + G         +  
Sbjct: 249 KAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIAT 308

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  L+ G+     L     L + MV+NG  P+   Y  LI  + +      A      + 
Sbjct: 309 YCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMR 368

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
            +G  PD V +  +I  L K G  +DA+  ++ +++  L P +  + SL+  +C   ++ 
Sbjct: 369 QQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWE 428

Query: 378 LLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
              +L+  +    +  + + +N+++   CK G   ++ KL++ M+  G  PD  ++  L+
Sbjct: 429 RAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLI 488

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            G C A K+DEA+ +  G+V      N   +  +++   +  R   A+ LF+        
Sbjct: 489 DGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVS 548

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
            D+++Y + ++GL +  RT  A  LY ++          TY ++L   CK +      R+
Sbjct: 549 PDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRM 608

Query: 555 LQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            Q++    ++L+  T   +   + K   +  A +  V   + GL+P+
Sbjct: 609 FQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPN 655



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 103/432 (23%), Positives = 192/432 (44%), Gaps = 16/432 (3%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET 180
           T+   +    +G+     +E    M + G  PN      +M      G+    I  LK+ 
Sbjct: 233 TYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKV 292

Query: 181 QL----PNFLSFNIAL-CNLCKLNDVSNVKDVIGM------MVRKGFYPNVRMFEILLNC 229
           +     P+ L  +IA  C L  L   +    ++GM      MVR G +P+  ++ IL+  
Sbjct: 293 RSDGVEPDGLEPDIATYCTL--LQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICA 350

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
           + K G++ EA  +   M   G +     +  +I    +  R++ A   +E+M+  G SP 
Sbjct: 351 YAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPG 410

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
            + Y SLI G      +  A   +  +   G   + +F N +ID   K G   ++  ++D
Sbjct: 411 NIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFD 470

Query: 350 GLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAG 406
            ++ + + PD  T+ +L+   CL+G+     KL+ G+    ++ + V Y  L++ +CK  
Sbjct: 471 LMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKIS 530

Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
               A+ L+  M   G +PD  ++  +L+GL   R+   A  +Y  I  +   +    + 
Sbjct: 531 RMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYN 590

Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
            I+  L +      A+++F+   +    L+  ++ + I  LL+ GR  EA  L+      
Sbjct: 591 IILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSN 650

Query: 527 AVPPNAYTYRVM 538
            + PN +TYR+M
Sbjct: 651 GLVPNYWTYRLM 662



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 118/510 (23%), Positives = 210/510 (41%), Gaps = 54/510 (10%)

Query: 142 FDEMGRFG---FTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF----LSFNIALCN 194
           ++ M R G    TP      I++    +  R+DLG   L       F    ++F   L  
Sbjct: 72  YNRMARAGAGKVTPTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKG 131

Query: 195 LCKLNDVSNVKD-VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT---LG 250
           LC     S+  D V+  M      P+V    ILL   C   R  EA +L  +M      G
Sbjct: 132 LCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGG 191

Query: 251 TSLSVNAWTVLIDGF------------------RRL-----------------RRLDMAG 275
           ++  V ++T +I+GF                  RR+                 + +D A 
Sbjct: 192 SAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAM 251

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL-----DMLESEGHAPDLVFHNV 330
            +   MV+NG  PN  TYTS++ G+  +     A  FL     D +E +G  PD+  +  
Sbjct: 252 EVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCT 311

Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA 390
           L+   +  G+      + D ++   + PD Y +  L+      G+      +   +  + 
Sbjct: 312 LLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQG 371

Query: 391 ---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
              D V Y A++   CK+G    A+  +  M+D+G +P N  +  L+ GLC   K + A 
Sbjct: 372 LNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAE 431

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            +   ++     +N     +I+D   + GR  ++ +LF   +      D+++Y+  I G 
Sbjct: 432 ELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGY 491

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
              G+ +EA  L S M  + + PN  TYR ++  +CK   +     L +++  + +  D 
Sbjct: 492 CLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDI 551

Query: 568 HTSIRLTKFIFKFHSSSSAVNQLVEMCNLG 597
            T   + + +F+   +++A    V +   G
Sbjct: 552 ITYNIILQGLFQTRRTAAAKELYVRITESG 581



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 91/390 (23%), Positives = 181/390 (46%), Gaps = 11/390 (2%)

Query: 136 GMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSF 188
           G V EA   F +M + G  P+      V+ +L K GRV+  +    +++ E   P  + +
Sbjct: 355 GKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVY 414

Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
           N  +  LC  N     +++I  M+ +G   N   F  +++  CK GR+ E+ +L  LM+ 
Sbjct: 415 NSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVR 474

Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
           +G    +  ++ LIDG+    ++D A  L   MV  G  PN VTY +LI G+ +      
Sbjct: 475 IGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGD 534

Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
           A      +ES G +PD++ +N+++  L +      A ++Y  + E     +  T+  +L 
Sbjct: 535 ALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILH 594

Query: 369 TVC---LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
            +C   L+     + + +C ++++ +   +N ++    K G   +A  L+      G  P
Sbjct: 595 GLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVP 654

Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
           + +++  +   + G   ++E   ++  +  N   V++ +   IV  L++ G   +A    
Sbjct: 655 NYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYL 714

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
                + + L+  + ++ I  LL GG+ +E
Sbjct: 715 SMIDEKHFSLEASTASLFID-LLSGGKYQE 743



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 105/257 (40%), Gaps = 15/257 (5%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           L G+ +    ++  +  VG      T+   +  Y +    G  L  F EM   G +P+  
Sbjct: 493 LAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDII 552

Query: 156 ARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
             NI++  LF+  R     +L +++ +        ++NI L  LCK     +   +   +
Sbjct: 553 TYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNL 612

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVL-----IDGFR 266
                    R F I+++   K+GR  EA  L     + G  L  N WT       I G  
Sbjct: 613 CLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNG--LVPNYWTYRLMAENIIGQG 670

Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
            L  LD    L+  M  NGC+ +      +++  ++    + A ++L M++ +  + +  
Sbjct: 671 LLEELDQ---LFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEAS 727

Query: 327 FHNVLIDCLSKMGSYDD 343
             ++ ID LS  G Y +
Sbjct: 728 TASLFIDLLSG-GKYQE 743



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 57/270 (21%), Positives = 112/270 (41%), Gaps = 11/270 (4%)

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG------RFSLLPKLVCGLEVEADLVVY 395
           +DA  V+D LL        Y     L+ V          R++ + +   G +V   +  Y
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAG-KVTPTVHTY 90

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN-VYQGIV 454
             L+   C+A   +        ++ KGF  +  +F  LL+GLC  ++  +A++ V + + 
Sbjct: 91  AILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK---YPLDVVSYTVAIRGLLEGG 511
             +   +    T ++  L +  R  +A++L       +      DVVSYT  I G  + G
Sbjct: 151 ELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEG 210

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSI 571
            + +AY  Y +M    + P+  TY  ++ + CK + +     +L  ++   +  +  T  
Sbjct: 211 DSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYT 270

Query: 572 RLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            +            A+  L ++ + G+ PD
Sbjct: 271 SIMHGYCSSGQPKEAIGFLKKVRSDGVEPD 300



 Score = 47.4 bits (111), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 38/188 (20%), Positives = 75/188 (39%), Gaps = 4/188 (2%)

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
           + R+G      T+   +  Y         ++    M   G  PNT     +++   KI R
Sbjct: 472 MVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISR 531

Query: 170 VDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEI 225
           +   + + KE +     P+ +++NI L  L +    +  K++   +   G    +  + I
Sbjct: 532 MGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNI 591

Query: 226 LLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
           +L+  CK     +A ++   +  +   L    + ++ID   ++ R   A  L+     NG
Sbjct: 592 ILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNG 651

Query: 286 CSPNVVTY 293
             PN  TY
Sbjct: 652 LVPNYWTY 659


>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 775

 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 104/471 (22%), Positives = 209/471 (44%), Gaps = 6/471 (1%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           + G   +   +V E++  G V    T+ + +    +        E + EM   G   + +
Sbjct: 275 MQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVY 334

Query: 156 ARNIVMDVLFKIGRVDLGIKVLK---ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
           + N +++   K         +     E+ L N  +FN  L  LCK   ++   ++   ++
Sbjct: 335 SLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVI 394

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
            KG  PNV  +  ++   C+   I  A ++   M+  G + +   +T+L+DG+ +   ++
Sbjct: 395 AKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIE 454

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A  ++ +M      P   T   +IKG  +A          +   S+G  P  + +N +I
Sbjct: 455 NAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTII 514

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VE 389
           D   K G+ + A +VY  + E+ + P + T+ SL+   C      L  KL+  ++   ++
Sbjct: 515 DGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLK 574

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            D+  Y  L+  FCK      A +L N +   G +P+ + +  ++ G      ++EAI++
Sbjct: 575 MDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDL 634

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
           Y+ +V      +   +T+++D L+++GR   A  +    + +    D  ++TV I GL  
Sbjct: 635 YKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCN 694

Query: 510 GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
            G+ E A  +   M    + P+   Y  ++    KE N++   RL  +++D
Sbjct: 695 KGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLD 745



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/335 (26%), Positives = 148/335 (44%), Gaps = 7/335 (2%)

Query: 109 ELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIG 168
           E+   G    A TF + +  Y++          F  M      P      I++  L K G
Sbjct: 427 EMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAG 486

Query: 169 RV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFE 224
           R     DL  K + +  +P  + +N  +    K  +++   +V   M   G  P+   + 
Sbjct: 487 RSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYT 546

Query: 225 ILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN 284
            L++ FCK   I  A +LL  M   G  + + A+  LIDGF + R +  A  L  ++   
Sbjct: 547 SLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGA 606

Query: 285 GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
           G SPN   Y S+I GF        A      + +EG   DL  +  LID L K G    A
Sbjct: 607 GLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYA 666

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV---CGLEVEADLVVYNALLSY 401
            D++  +L   ++PD      L++ +C  G+F    K++    G  +   +++YN L++ 
Sbjct: 667 SDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAG 726

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
             K G   +A +L++ MLD+G  PDN ++  L+ G
Sbjct: 727 HFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 761



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/386 (22%), Positives = 161/386 (41%), Gaps = 36/386 (9%)

Query: 129 YWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPN 184
           + R +      + + EM   GFTPN     I+MD  FK G ++    +    +    LP 
Sbjct: 412 HCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPT 471

Query: 185 FLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLG 244
             +  I +  LCK       +D+    V +GF P    +  +++ F K G I  A  +  
Sbjct: 472 DTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYR 531

Query: 245 LMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
            M  +G + S   +T LIDGF +   +D+A  L   M + G   ++  Y +LI GF + +
Sbjct: 532 EMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRR 591

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
               A   L+ L   G +P+   +N +I     M + ++A+D+Y  ++   +  D  T+ 
Sbjct: 592 DMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYT 651

Query: 365 SLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
           SL+  +  SGR                 ++Y               A  ++  ML KG  
Sbjct: 652 SLIDGLLKSGR-----------------LLY---------------ASDIHTEMLSKGIL 679

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           PD+ +   L+ GLC   + + A  + + +   N   +  ++  ++    + G   +A +L
Sbjct: 680 PDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRL 739

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEG 510
               +      D ++Y + + G  +G
Sbjct: 740 HDEMLDRGLVPDNITYDILVNGKFKG 765



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 101/498 (20%), Positives = 214/498 (42%), Gaps = 12/498 (2%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG 173
           G  +  + + +F+ +       G  L    EM   G+ P       V+    K G V   
Sbjct: 188 GVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEA 247

Query: 174 IKVLKETQLPNFLSFNIALCN-----LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLN 228
           ++ LK+  +    S N+A+        C   ++ +   ++  +   G  PN   + +L++
Sbjct: 248 LR-LKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLID 306

Query: 229 CFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSP 288
             CK G I +A++    M T G   SV +   +++G+ + +    A  ++   +++G + 
Sbjct: 307 GCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLA- 365

Query: 289 NVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVY 348
           NV T+ +L+    +    + A +  D + ++G +P++V +N +I    +  + + A  VY
Sbjct: 366 NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVY 425

Query: 349 DGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCK 404
             +L+    P++ TF  L+      G     FS+  ++     +  D  +   ++   CK
Sbjct: 426 KEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTL-GIIIKGLCK 484

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV 464
           AG   +   L+N  + +GF P    +  ++ G      I+ A NVY+ +       +   
Sbjct: 485 AGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVT 544

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
           +T+++D   +      A++L      +   +D+ +Y   I G  +    + A+ L ++++
Sbjct: 545 YTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELR 604

Query: 525 HIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSS 584
              + PN + Y  M+  F    N++    L + +++  I  D  T   L   + K     
Sbjct: 605 GAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLL 664

Query: 585 SAVNQLVEMCNLGLIPDE 602
            A +   EM + G++PD+
Sbjct: 665 YASDIHTEMLSKGILPDD 682


>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 657

 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 104/471 (22%), Positives = 209/471 (44%), Gaps = 6/471 (1%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           + G   +   +V E++  G V    T+ + +    +        E + EM   G   + +
Sbjct: 157 MQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVY 216

Query: 156 ARNIVMDVLFKIGRVDLGIKVLK---ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
           + N +++   K         +     E+ L N  +FN  L  LCK   ++   ++   ++
Sbjct: 217 SLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVI 276

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
            KG  PNV  +  ++   C+   I  A ++   M+  G + +   +T+L+DG+ +   ++
Sbjct: 277 AKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIE 336

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A  ++ +M      P   T   +IKG  +A          +   S+G  P  + +N +I
Sbjct: 337 NAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTII 396

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VE 389
           D   K G+ + A +VY  + E+ + P + T+ SL+   C      L  KL+  ++   ++
Sbjct: 397 DGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLK 456

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            D+  Y  L+  FCK      A +L N +   G +P+ + +  ++ G      ++EAI++
Sbjct: 457 MDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDL 516

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
           Y+ +V      +   +T+++D L+++GR   A  +    + +    D  ++TV I GL  
Sbjct: 517 YKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCN 576

Query: 510 GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
            G+ E A  +   M    + P+   Y  ++    KE N++   RL  +++D
Sbjct: 577 KGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLD 627



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/335 (26%), Positives = 148/335 (44%), Gaps = 7/335 (2%)

Query: 109 ELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIG 168
           E+   G    A TF + +  Y++          F  M      P      I++  L K G
Sbjct: 309 EMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAG 368

Query: 169 RV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFE 224
           R     DL  K + +  +P  + +N  +    K  +++   +V   M   G  P+   + 
Sbjct: 369 RSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYT 428

Query: 225 ILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN 284
            L++ FCK   I  A +LL  M   G  + + A+  LIDGF + R +  A  L  ++   
Sbjct: 429 SLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGA 488

Query: 285 GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
           G SPN   Y S+I GF        A      + +EG   DL  +  LID L K G    A
Sbjct: 489 GLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYA 548

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV---CGLEVEADLVVYNALLSY 401
            D++  +L   ++PD      L++ +C  G+F    K++    G  +   +++YN L++ 
Sbjct: 549 SDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAG 608

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
             K G   +A +L++ MLD+G  PDN ++  L+ G
Sbjct: 609 HFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 643



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/386 (22%), Positives = 161/386 (41%), Gaps = 36/386 (9%)

Query: 129 YWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPN 184
           + R +      + + EM   GFTPN     I+MD  FK G ++    +    +    LP 
Sbjct: 294 HCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPT 353

Query: 185 FLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLG 244
             +  I +  LCK       +D+    V +GF P    +  +++ F K G I  A  +  
Sbjct: 354 DTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYR 413

Query: 245 LMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAK 304
            M  +G + S   +T LIDGF +   +D+A  L   M + G   ++  Y +LI GF + +
Sbjct: 414 EMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRR 473

Query: 305 MFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
               A   L+ L   G +P+   +N +I     M + ++A+D+Y  ++   +  D  T+ 
Sbjct: 474 DMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYT 533

Query: 365 SLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
           SL+  +  SGR                 ++Y               A  ++  ML KG  
Sbjct: 534 SLIDGLLKSGR-----------------LLY---------------ASDIHTEMLSKGIL 561

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
           PD+ +   L+ GLC   + + A  + + +   N   +  ++  ++    + G   +A +L
Sbjct: 562 PDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRL 621

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEG 510
               +      D ++Y + + G  +G
Sbjct: 622 HDEMLDRGLVPDNITYDILVNGKFKG 647



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 101/498 (20%), Positives = 214/498 (42%), Gaps = 12/498 (2%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG 173
           G  +  + + +F+ +       G  L    EM   G+ P       V+    K G V   
Sbjct: 70  GVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEA 129

Query: 174 IKVLKETQLPNFLSFNIALCN-----LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLN 228
           ++ LK+  +    S N+A+        C   ++ +   ++  +   G  PN   + +L++
Sbjct: 130 LR-LKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLID 188

Query: 229 CFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSP 288
             CK G I +A++    M T G   SV +   +++G+ + +    A  ++   +++G + 
Sbjct: 189 GCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLA- 247

Query: 289 NVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVY 348
           NV T+ +L+    +    + A +  D + ++G +P++V +N +I    +  + + A  VY
Sbjct: 248 NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVY 307

Query: 349 DGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCK 404
             +L+    P++ TF  L+      G     FS+  ++     +  D  +   ++   CK
Sbjct: 308 KEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTL-GIIIKGLCK 366

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV 464
           AG   +   L+N  + +GF P    +  ++ G      I+ A NVY+ +       +   
Sbjct: 367 AGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVT 426

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
           +T+++D   +      A++L      +   +D+ +Y   I G  +    + A+ L ++++
Sbjct: 427 YTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELR 486

Query: 525 HIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSS 584
              + PN + Y  M+  F    N++    L + +++  I  D  T   L   + K     
Sbjct: 487 GAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLL 546

Query: 585 SAVNQLVEMCNLGLIPDE 602
            A +   EM + G++PD+
Sbjct: 547 YASDIHTEMLSKGILPDD 564



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 113/496 (22%), Positives = 190/496 (38%), Gaps = 88/496 (17%)

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT-----SLSVNAWTVLIDGF------- 265
           P+++   ILL    +     EA +L   M+ +G      +L V     L +G        
Sbjct: 3   PSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQH 62

Query: 266 -----RRLRRLDMAGY------------------LWEKMVQNGCSPNVVTYTSLIKGFME 302
                 R   LD   Y                  L  +M   G  P   T+TS+I   ++
Sbjct: 63  FLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVK 122

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
               + A    D + + G + +L     L+      G+   AL + + + E  LVP+  T
Sbjct: 123 EGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVT 182

Query: 363 FCSLLSTVCLSGR--------------------FSLLPKLVCGLEVE------------- 389
           +  L+   C +G                     +SL   L   L+ +             
Sbjct: 183 YSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDAL 242

Query: 390 ----ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
               A++  +N LLS+ CK G  N+A  L++ ++ KG +P+  S+  ++ G C    I+ 
Sbjct: 243 ESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINA 302

Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR-AIVEKYPLDVVSYTVAI 504
           A  VY+ ++ N    NA   T ++D   + G    A  +F R       P D  +  + I
Sbjct: 303 ACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTD-TTLGIII 361

Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
           +GL + GR+ E   L+++       P    Y  ++  F KE NI +   + +++ +  I 
Sbjct: 362 KGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGIT 421

Query: 565 LDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTPVSLFDGF 624
               T   L     K ++   A+  L +M   GL  D   +  G          +L DGF
Sbjct: 422 PSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMD--IKAYG----------TLIDGF 469

Query: 625 VPCERRAGNANHLLLN 640
             C+RR   + H LLN
Sbjct: 470 --CKRRDMKSAHELLN 483


>gi|357470109|ref|XP_003605339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355506394|gb|AES87536.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 472

 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 98/380 (25%), Positives = 182/380 (47%), Gaps = 5/380 (1%)

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           LC++ +V    +V   M  +    +   +  L++  C  GRI EA  LL  M   GT  +
Sbjct: 10  LCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPN 69

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
             A+ VLI    +   L  A  L + M   GC PN VTY SL+ G         A S L+
Sbjct: 70  PVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLN 129

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            + +    P+ +    L+D   K G   D + V   L E     + +++ SL+S +   G
Sbjct: 130 RMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEG 189

Query: 375 RFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
           +      L K +     + + +VY+AL+   C+ G P++A +    M +KG TP+++++ 
Sbjct: 190 KGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYS 249

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            L+ G   A  I +AI V++ +  N+   +   ++ +++ L + G+  +A+ ++++ +  
Sbjct: 250 SLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSR 309

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM--KHIAVPPNAYTYRVMLLSFCKERNIK 549
              LDVV+Y+  I G       E+   L++QM   +  + P+  TY ++L +FC + ++ 
Sbjct: 310 GIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVS 369

Query: 550 MVKRLLQDVIDARIELDYHT 569
               +L  ++D   + D+ T
Sbjct: 370 RAIDILNTMLDQGCDPDFIT 389



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 89/362 (24%), Positives = 160/362 (44%), Gaps = 56/362 (15%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALC 193
            +E F  M       + +  + +M  L   GR+D  + +L E Q+    PN ++FN+ + 
Sbjct: 19  AVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLIS 78

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
            LCK  D+S    ++  M  KG  PN   +  L++  C  G++ +A  LL  M+      
Sbjct: 79  ALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVP 138

Query: 254 SVNAWTVLIDGF----------RRLRRLDMAGY-------------------------LW 278
           +   +  L+DGF          R L  L+  GY                         LW
Sbjct: 139 NDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLW 198

Query: 279 EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
           ++MV+ GC PN + Y++LI G         A  +L  ++++GH P+   ++ L      M
Sbjct: 199 KEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSL------M 252

Query: 339 GSYDDALDVYDGLLELKLVPDS------YTFCSLLSTVCLSGRFS---LLPKLVCGLEVE 389
             Y +A D++  +L  K + D+        +  L++ +C +G+     ++ K +    ++
Sbjct: 253 WGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIK 312

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTML--DKGFTPDNYSFVGLLRGLCGARKIDEAI 447
            D+V Y++++  FC A    Q +KL+N ML  +    PD  ++  LL   C    +  AI
Sbjct: 313 LDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAI 372

Query: 448 NV 449
           ++
Sbjct: 373 DI 374



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 82/365 (22%), Positives = 158/365 (43%), Gaps = 23/365 (6%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFD---EMGRFGFTP 152
           L G+ +    ++  +    CV    TF   +  + +   +G  L+       +   G+  
Sbjct: 117 LKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVK---HGRALDGVRVLVSLEEKGYRG 173

Query: 153 NTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVI 208
           N F+ + ++  LFK G+ + G+++ KE       PN + ++  +  LC+       K+ +
Sbjct: 174 NEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYL 233

Query: 209 GMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRL 268
             M  KG  PN   +  L+  + + G I +A  +   M     +     +++LI+G  + 
Sbjct: 234 IEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKN 293

Query: 269 RRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML--ESEGHAPDLV 326
            +L  A  +W++M+  G   +VV Y+S+I GF  A++        + +   +    PD+V
Sbjct: 294 GKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVV 353

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL 386
            +N+L++      S   A+D+ + +L+    PD  T    L T+    R ++ P    G 
Sbjct: 354 TYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTL----RDNMDPPQD-GR 408

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
           E   +LVV   L+      G  N    +   ML K   P   ++   ++ LC   K+ + 
Sbjct: 409 EFLDELVV--RLIKRQRTVGASN----IIEVMLQKFLLPKPSTWALAVQQLCKPMKVRKT 462

Query: 447 INVYQ 451
           I+  Q
Sbjct: 463 ISECQ 467



 Score = 47.8 bits (112), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 29/130 (22%), Positives = 56/130 (43%)

Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
            + ++  LC    +D+A+ V++G+   N   + + ++ ++  L   GR  +A+ L     
Sbjct: 3   LIPIVLALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQ 62

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
           VE    + V++ V I  L + G    A  L   M      PN  TY  ++   C +  + 
Sbjct: 63  VEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLD 122

Query: 550 MVKRLLQDVI 559
               LL  ++
Sbjct: 123 KAMSLLNRMV 132


>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
          Length = 806

 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 105/436 (24%), Positives = 192/436 (44%), Gaps = 21/436 (4%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP-----NFLSFNIALCN 194
           +AF  +   G  P+    N  ++ L + G++D   +V  E +       N  S+   +  
Sbjct: 171 DAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMIKA 230

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           LCK   V    +++  + R G  P V  + +L++  CK GR+ EA++L G M   G + S
Sbjct: 231 LCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPS 290

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
           V  + +LI+G  R  R    G + ++M Q G SPN V Y  LI         S A    D
Sbjct: 291 VVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFD 350

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC--- 371
            +  +   P  V +N++   L K G  + A  + + +L + +       C L +TV    
Sbjct: 351 EMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMT----VHCGLFNTVVAWL 406

Query: 372 ------LSGRFSLLPKLVC-GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
                 L    S+  ++V  G+     L+   A +   CK G   +AV ++   L+KG  
Sbjct: 407 LQRTRRLESVVSITNEMVTRGMRPNDPLMT--ACMRELCKGGKHQEAVGIWFKTLNKGLG 464

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
            +  +   L+ GLC  + + EA  V Q ++     +++  +  ++    +  +  +AI+L
Sbjct: 465 VNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKL 524

Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
                   +  D+ ++   +      G+ EE + L  QMK   + P+  +Y  ++   CK
Sbjct: 525 HGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCK 584

Query: 545 ERNIKMVKRLLQDVID 560
            ++I+  K  L +++D
Sbjct: 585 AKDIRKAKEYLTELMD 600



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 112/529 (21%), Positives = 224/529 (42%), Gaps = 10/529 (1%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           +GR E    + G + + G      TF + +    RGE +G V     EM + G +PN   
Sbjct: 269 SGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVI 328

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            N ++    + G     +++  E  L    P  +++N+    LCK  ++   + ++  M+
Sbjct: 329 YNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDML 388

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAY-QLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
             G   +  +F  ++    +  R  E+   +   M+T G   +    T  +    +  + 
Sbjct: 389 SIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKH 448

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
             A  +W K +  G   N+ T  +LI G  E K    A   +  + ++G   D + +N++
Sbjct: 449 QEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIM 508

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA- 390
           I    K    ++A+ ++  +      PD +TF +LL   C  G+      L+  ++ E  
Sbjct: 509 IRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGL 568

Query: 391 --DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
             D+V Y  ++   CKA    +A +    ++D+G  P+ + +  L+ G      I  AI+
Sbjct: 569 QPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAID 628

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
             + +  N        + +++  +  AG   +A  +F +A      L V+ YT+ I+G  
Sbjct: 629 AVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYC 688

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
           + G+  EA   + +M+   + PN  TY  ++ ++ K  N +   +L  +++ + +  D  
Sbjct: 689 KLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNI 748

Query: 569 TSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTP 617
           T   L     + +S    +    E+ +  L  D+  R   +LS+    P
Sbjct: 749 TYGTLIARCSEVNSLDKDIGHTAELSSGALTKDD--RMYNILSNGINAP 795


>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 977

 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 127/558 (22%), Positives = 237/558 (42%), Gaps = 54/558 (9%)

Query: 96  LTGR-FETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNT 154
           L GR  +   G+V E+   G  I    +  F+ +  +          FD M  FG TP  
Sbjct: 326 LKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGA 385

Query: 155 FARNIVMDVLFKIGRVDLGIKVLKETQLPNFL----SFNIALCNLCKLNDVSNVKDVIGM 210
            A   +++  F+   V  G ++L E +  N +    ++  A+  +C   D+    +++  
Sbjct: 386 RAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKE 445

Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
           M   G  PNV ++  L+  F +  R  +A ++L  M   G +     +  LI G  + ++
Sbjct: 446 MGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKK 505

Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL-DMLE------------ 317
           +D A     +MV+NG  P+  TY + I G++EA  F+ A  ++ +MLE            
Sbjct: 506 MDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTG 565

Query: 318 ----------------------SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
                                  +G   D   + VL++ L K G  +DA +++  +    
Sbjct: 566 LINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKG 625

Query: 356 LVPDSYTFCSLLSTVCLSGRF----SLLPKLV-CGLEVEADLVVYNALLSYFCKAGFPNQ 410
           + PD +++ +L+      G      S+  ++V  GL   +++++YN LL  FC++G   +
Sbjct: 626 IAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGL--TSNVIIYNMLLGGFCRSGEIEK 683

Query: 411 AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
           A +L + M  KGF P+  ++  ++ G C +  + EA  ++  + +     ++ V+T +VD
Sbjct: 684 AKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVD 743

Query: 471 RLIEAGRCHKAIQLFRRAIVEKY-PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAV- 528
                    +AI +F     EK        +   I  + + G+TE    + +++   +  
Sbjct: 744 GCCRLNDVERAITIFETN--EKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFD 801

Query: 529 ---PPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSS 585
               PN  TY +M+   CKE N++  K L   +  A +     T   L     K    S 
Sbjct: 802 KFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSE 861

Query: 586 AVNQLVEMCNLGLIPDEM 603
             +   E+   G+ PD +
Sbjct: 862 MFSVFDEVIAAGIEPDNI 879



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 113/530 (21%), Positives = 222/530 (41%), Gaps = 56/530 (10%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           +G  +    IV E+   GC      +   ++ + +   +G  +    EM   G  P+TF 
Sbjct: 433 SGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFC 492

Query: 157 RNIVMDVLFKIGRVDLG----IKVLKETQLPNFLSF------------------------ 188
            N ++  L K  ++D      +++++    P+  ++                        
Sbjct: 493 YNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEML 552

Query: 189 ------NIALC-----NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIA 237
                 N  LC       CK   V         MV +G   + + + +L+N   K G++ 
Sbjct: 553 ECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVN 612

Query: 238 EAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLI 297
           +A ++   M   G +  V ++  LIDGF +L  +  A  ++++MVQ G + NV+ Y  L+
Sbjct: 613 DAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLL 672

Query: 298 KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
            GF  +     A   LD +  +G  P+ V +  +ID   K G   +A  ++D +    LV
Sbjct: 673 GGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLV 732

Query: 358 PDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE-----ADLVVYNALLSYFCKAGFPNQAV 412
           PDS+ + +L+   C   R + + + +   E       +    +NAL+++  K G      
Sbjct: 733 PDSFVYTTLVDGCC---RLNDVERAITIFETNEKGCASSSAPFNALINWVFKFGKTELTT 789

Query: 413 KLYNTMLDKGF----TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAI 468
            + N ++D  F     P++ ++  ++  LC    ++ A  ++  +   N       +T++
Sbjct: 790 DMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSL 849

Query: 469 VDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM-KHIA 527
           ++   + GR  +   +F   I      D + Y+V I   L+ G T +A +L  QM    A
Sbjct: 850 LNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNA 909

Query: 528 VPPNA----YTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
           V         T R +L  F K   +++ ++++++++  +   D  T I L
Sbjct: 910 VDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIEL 959



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/428 (21%), Positives = 180/428 (42%), Gaps = 36/428 (8%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIA----LC 193
            LE    M   G  P+  + N+++D L K  R++    +L E       + N+A    + 
Sbjct: 264 ALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILID 323

Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
            L K  +      ++  MV  GF  +  M++  +    K G + +A  L   MIT G + 
Sbjct: 324 GLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTP 383

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
              A+  LI+GF R + +     L  ++ +     +  TY + +KG   +     A++ +
Sbjct: 384 GARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIV 443

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
             + + G  P++V +  LI    +   + DA+ V   + E  + PD  TFC         
Sbjct: 444 KEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPD--TFC--------- 492

Query: 374 GRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
                                YN+L+    KA   ++A      M++ GF PD +++   
Sbjct: 493 ---------------------YNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAF 531

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           + G   A +   A    + ++      N  + T +++   + G+  +A   FR  + +  
Sbjct: 532 ISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGI 591

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
             D  +YTV + GL++ G+  +A  ++ +M+   + P+ ++Y  ++  F K  N++    
Sbjct: 592 LGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASS 651

Query: 554 LLQDVIDA 561
           +  +++ A
Sbjct: 652 IFDEMVQA 659



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 84/377 (22%), Positives = 157/377 (41%), Gaps = 54/377 (14%)

Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG 173
           G +  A+T+ + +    +        E F EM   G  P+ F+   ++D   K+G +   
Sbjct: 590 GILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKA 649

Query: 174 IKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
             +  E        N + +N+ L   C+  ++   K+++  M  KGF PN   +  +++ 
Sbjct: 650 SSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDG 709

Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
           +CK G +AEA+QL   M   G       +T L+DG  RL  ++ A  ++E   + GC+ +
Sbjct: 710 YCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETN-EKGCASS 768

Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEG----HAPDLVFHNVLIDCLSKMGSYDDAL 345
              + +LI    +     +    ++ L          P+ V +N++ID L K G+ + A 
Sbjct: 769 SAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAK 828

Query: 346 DVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYN----- 396
           +++  + +  L+P   T+ SLL+     GR    FS+  +++    +E D ++Y+     
Sbjct: 829 ELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAA-GIEPDNIMYSVIINA 887

Query: 397 -----------------------------------ALLSYFCKAGFPNQAVKLYNTMLDK 421
                                              ALLS F K G    A K+   M+  
Sbjct: 888 FLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRL 947

Query: 422 GFTPDNYSFVGLLRGLC 438
            + PD+ + + L+   C
Sbjct: 948 KYIPDSSTVIELINESC 964



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 61/289 (21%), Positives = 128/289 (44%), Gaps = 12/289 (4%)

Query: 97  TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
           +G  E  + ++ E++  G    A T+   +  Y +        + FDEM   G  P++F 
Sbjct: 678 SGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFV 737

Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQ---LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
              ++D   ++  V+  I + +  +     +   FN  +  + K        D+I  ++ 
Sbjct: 738 YTTLVDGCCRLNDVERAITIFETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMD 797

Query: 214 KGF----YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLR 269
             F     PN   + I+++  CK G +  A +L   M       +V  +T L++G+ ++ 
Sbjct: 798 GSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMG 857

Query: 270 RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD----- 324
           R      ++++++  G  P+ + Y+ +I  F++  M + A   LD + ++    D     
Sbjct: 858 RRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLS 917

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           +     L+   +K+G  + A  V + ++ LK +PDS T   L++  C+S
Sbjct: 918 ISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELINESCIS 966


>gi|326524964|dbj|BAK04418.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 565

 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 106/443 (23%), Positives = 198/443 (44%), Gaps = 40/443 (9%)

Query: 48  LAPHIVHSTLLNCP-SDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGI 106
           ++P +V   L N   + ++AL+FF W  +Q+ + +   SF ++I  + ++  +F  V  +
Sbjct: 143 VSPQLVAEVLKNLSNAGILALAFFRWAERQQGFVYTADSFHNLIEALGKIK-QFRLVWSL 201

Query: 107 VGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK 166
           V E  R   ++   TF L +R Y R       +E F++M  FG   +    N ++DVL K
Sbjct: 202 V-EAMRCRGLLSKDTFRLIVRRYARARKVKEAVETFEKMAGFGLKADLSDYNWLIDVLSK 260

Query: 167 IGRVDLGIKVLKETQ-----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
             +V     + KE +     +P+  ++ + +       D+  +K V   M+  G  P+V 
Sbjct: 261 SKQVKKAHAIFKEMKRNGRFVPDLKTYTVLMEGWGHEKDLLMLKSVYQEMLDAGLQPDVV 320

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            + +L++ FCK G+  EA ++   M T G   S + + +LI+G     RLD A   +E  
Sbjct: 321 AYGMLISSFCKSGKCDEAIKVFREMETNGCMPSPHVYCMLINGLGSEERLDEALKYFELS 380

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
             +G    V T  +++  +  +  F  AF  +D +   G  P+   +++++  L K    
Sbjct: 381 KASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKSGIGPNSRTYDIILHHLIKSQKI 440

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSY 401
           ++A +V+ G+        S   C                        E  L  Y  ++  
Sbjct: 441 EEAYNVFQGM--------SKDGC------------------------EPQLNTYTMMVGM 468

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVN 461
           FC     + A+K++N M +KG  P  + F  L+ GLC   +++EA   +Q ++       
Sbjct: 469 FCSNERVDVALKVWNQMKEKGVLPCMHMFSALINGLCFENRLEEACAYFQEMLDRGIRPP 528

Query: 462 AHVHTAIVDRLIEAGRCHKAIQL 484
             + + + + LIE GR   A ++
Sbjct: 529 GQLFSNLKEALIEGGRISLAQEM 551



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/348 (19%), Positives = 140/348 (40%), Gaps = 34/348 (9%)

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
           + +++  LI+   ++++  +   L E M   G   +  T+  +++ +  A+    A    
Sbjct: 178 TADSFHNLIEALGKIKQFRLVWSLVEAMRCRGLL-SKDTFRLIVRRYARARKVKEAVETF 236

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE-LKLVPDSYTFCSLLSTVCL 372
           + +   G   DL  +N LID LSK      A  ++  +    + VPD  T+  L+     
Sbjct: 237 EKMAGFGLKADLSDYNWLIDVLSKSKQVKKAHAIFKEMKRNGRFVPDLKTYTVLME---- 292

Query: 373 SGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
                       G   E DL++  ++                Y  MLD G  PD  ++  
Sbjct: 293 ------------GWGHEKDLLMLKSV----------------YQEMLDAGLQPDVVAYGM 324

Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
           L+   C + K DEAI V++ +  N    + HV+  +++ L    R  +A++ F  +    
Sbjct: 325 LISSFCKSGKCDEAIKVFREMETNGCMPSPHVYCMLINGLGSEERLDEALKYFELSKASG 384

Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVK 552
           +P++V +    +       + + A+ +  +M+   + PN+ TY ++L    K + I+   
Sbjct: 385 FPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKSGIGPNSRTYDIILHHLIKSQKIEEAY 444

Query: 553 RLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
            + Q +     E   +T   +            A+    +M   G++P
Sbjct: 445 NVFQGMSKDGCEPQLNTYTMMVGMFCSNERVDVALKVWNQMKEKGVLP 492



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 81/390 (20%), Positives = 151/390 (38%), Gaps = 75/390 (19%)

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
           ++GF      F  L+    K+ +    + L+  M   G  LS + + +++  + R R++ 
Sbjct: 172 QQGFVYTADSFHNLIEALGKIKQFRLVWSLVEAMRCRGL-LSKDTFRLIVRRYARARKVK 230

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH-APDLVFHNVL 331
            A   +EKM   G   ++  Y  LI    ++K    A +    ++  G   PDL  + VL
Sbjct: 231 EAVETFEKMAGFGLKADLSDYNWLIDVLSKSKQVKKAHAIFKEMKRNGRFVPDLKTYTVL 290

Query: 332 IDCLSKMGSYDDAL---DVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV 388
           ++     G   D L    VY  +L+  L PD                             
Sbjct: 291 ME---GWGHEKDLLMLKSVYQEMLDAGLQPD----------------------------- 318

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
              +V Y  L+S FCK+G  ++A+K++  M   G  P  + +  L+ GL    ++DEA+ 
Sbjct: 319 ---VVAYGMLISSFCKSGKCDEAIKVFREMETNGCMPSPHVYCMLINGLGSEERLDEALK 375

Query: 449 VYQ-----GIVMNNPAVNAHV------------------------------HTAIVDRLI 473
            ++     G  M  P  NA V                              +  I+  LI
Sbjct: 376 YFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKSGIGPNSRTYDIILHHLI 435

Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
           ++ +  +A  +F+    +     + +YT+ +       R + A  +++QMK   V P  +
Sbjct: 436 KSQKIEEAYNVFQGMSKDGCEPQLNTYTMMVGMFCSNERVDVALKVWNQMKEKGVLPCMH 495

Query: 534 TYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
            +  ++   C E  ++      Q+++D  I
Sbjct: 496 MFSALINGLCFENRLEEACAYFQEMLDRGI 525



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 68/318 (21%), Positives = 133/318 (41%), Gaps = 43/318 (13%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVG-CVIKAQTFLLFLRIYWRGEMYGMVLE 140
           D+  ++ +I V+++ + + +    I  E+ R G  V   +T+ + +  +   +   M+  
Sbjct: 247 DLSDYNWLIDVLSK-SKQVKKAHAIFKEMKRNGRFVPDLKTYTVLMEGWGHEKDLLMLKS 305

Query: 141 AFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPN------------ 184
            + EM   G  P+  A  +++    K G+ D  IKV +E +    +P+            
Sbjct: 306 VYQEMLDAGLQPDVVAYGMLISSFCKSGKCDEAIKVFREMETNGCMPSPHVYCMLINGLG 365

Query: 185 ------------------FLSFNIALCNL-----CKLNDVSNVKDVIGMMVRKGFYPNVR 221
                                  +  CN      C+ +   +   ++  M + G  PN R
Sbjct: 366 SEERLDEALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKSGIGPNSR 425

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
            ++I+L+   K  +I EAY +   M   G    +N +T+++  F    R+D+A  +W +M
Sbjct: 426 TYDIILHHLIKSQKIEEAYNVFQGMSKDGCEPQLNTYTMMVGMFCSNERVDVALKVWNQM 485

Query: 282 VQNGCSPNVVTYTSLIKGF-MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
            + G  P +  +++LI G   E ++      F +ML+     P  +F N L + L + G 
Sbjct: 486 KEKGVLPCMHMFSALINGLCFENRLEEACAYFQEMLDRGIRPPGQLFSN-LKEALIEGGR 544

Query: 341 YDDALDVYDGLLELKLVP 358
              A ++   L EL+  P
Sbjct: 545 ISLAQEMALKLDELRKTP 562


>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 158/314 (50%), Gaps = 7/314 (2%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNL 195
           + F +MG      N +   ++++  FK+G    GI++ ++ +L    PN  ++N  +C  
Sbjct: 220 QLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRC 279

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
           C    ++N  ++   M  +G   NV  +  L+   C+  R+ EA +L+  M   G S ++
Sbjct: 280 CNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNL 339

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
            ++  LIDG+  +  LD A  L+ +M  +G SP++ TY  LI GF EAK  +     +  
Sbjct: 340 ISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVRE 399

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
           +E+ G +P  V + +L+D L +  + + A  +Y  + +  LV D Y +  L+  +C+ G 
Sbjct: 400 MEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGD 459

Query: 376 FSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
                KL   L+   ++ + V+YN ++  +CK G   +A++L   M + G  P+  S+  
Sbjct: 460 MKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNS 519

Query: 433 LLRGLCGARKIDEA 446
            ++ LC   K  EA
Sbjct: 520 TIQILCKDEKWTEA 533



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 91/391 (23%), Positives = 181/391 (46%), Gaps = 4/391 (1%)

Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
           +V  F I++   C++G + + +++LG M  +G S +V  +T LIDG  +   ++    L+
Sbjct: 163 DVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLF 222

Query: 279 EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
            KM +     N  TYT LI GF +  +        + ++  G  P++  +N +I      
Sbjct: 223 YKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCND 282

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVY 395
           G  ++A +++D + E  +  +  T+ +L+  +C   R     +L+C ++   +  +L+ Y
Sbjct: 283 GKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISY 342

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
           N L+  +C  G  ++A  L+N M   G +P   ++  L+ G   A+      ++ + +  
Sbjct: 343 NTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEA 402

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
              + +   +T ++D L+ +    KA Q++          D+  Y V I GL   G  +E
Sbjct: 403 RGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKE 462

Query: 516 AYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTK 575
           A  L+  +  + + PN   Y  M+  +CKE +     RLL+++ +  +  +  +     +
Sbjct: 463 ASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQ 522

Query: 576 FIFKFHSSSSAVNQLVEMCNLGLIPD-EMWR 605
            + K    + A   L +M  LGL P   +W 
Sbjct: 523 ILCKDEKWTEAEVLLKDMIELGLKPSISIWN 553



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/307 (21%), Positives = 142/307 (46%), Gaps = 7/307 (2%)

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
            +I+   R +  + A + + +M+  G  P   T+ +L+   +++  F  A+   +  E++
Sbjct: 100 AIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFN--ETK 157

Query: 320 GHAP-DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL 378
           G+   D+    ++I    ++G  D   +V   + E+ L P+   + +L+   C +G    
Sbjct: 158 GNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIER 217

Query: 379 LPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
             +L   +  L+V A+   Y  L++ F K G     ++LY  M   G  P+ Y++  ++ 
Sbjct: 218 GKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMIC 277

Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
             C   K++ A  ++  +     A N   +  ++  L +  R  +A +L  R   +    
Sbjct: 278 RCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSP 337

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
           +++SY   I G    G  ++A  L++QMK     P+  TY +++  F + +N   V  ++
Sbjct: 338 NLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMV 397

Query: 556 QDVIDAR 562
           ++ ++AR
Sbjct: 398 RE-MEAR 403



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 51/218 (23%), Positives = 97/218 (44%), Gaps = 4/218 (1%)

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET----QLPNFLSFNIALCNLCKLND 200
           M R G +PN  + N ++D    IG +D    +  +     Q P+  ++NI +    +  +
Sbjct: 330 MKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKN 389

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
            + V D++  M  +G  P+   + IL++   +   I +A+Q+   M   G    +  + V
Sbjct: 390 SAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGV 449

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           LI G   +  +  A  L++ + +    PN V Y ++I G+ +      A   L  +   G
Sbjct: 450 LIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENG 509

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP 358
             P++  +N  I  L K   + +A  +   ++EL L P
Sbjct: 510 MVPNVASYNSTIQILCKDEKWTEAEVLLKDMIELGLKP 547



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 55/272 (20%), Positives = 121/272 (44%), Gaps = 7/272 (2%)

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVC 384
           ++ H  +I+   +    + AL  ++ ++   LVP S TF +LL  +  S  F    ++  
Sbjct: 95  VLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFN 154

Query: 385 GLE--VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
             +  V+ D+  +  ++   C+ G+ ++  ++   M + G +P+   +  L+ G C    
Sbjct: 155 ETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGD 214

Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTV 502
           I+    ++  +   +   N + +T +++   + G     I+L+ +  +     +V +Y  
Sbjct: 215 IERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNS 274

Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL----QDV 558
            I      G+   A+ L+ +M+   V  N  TY  ++   C+ER +   +RL+    +D 
Sbjct: 275 MICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDG 334

Query: 559 IDARIELDYHTSIRLTKFIFKFHSSSSAVNQL 590
           +   + + Y+T I     I     +SS  NQ+
Sbjct: 335 LSPNL-ISYNTLIDGYCSIGNLDKASSLFNQM 365



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/210 (19%), Positives = 84/210 (40%), Gaps = 36/210 (17%)

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
           ++++ A+++   ++  P QA+  +N M+ +G  P + +F  LL  L  +   ++A  V+ 
Sbjct: 95  VLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFN 154

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
               N                                      LDV S+ + I+G  E G
Sbjct: 155 ETKGN------------------------------------VKLDVYSFGIMIKGCCEVG 178

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSI 571
             ++ + +  QM+ + + PN   Y  ++   CK  +I+  K+L   + +  +  + +T  
Sbjct: 179 YLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYT 238

Query: 572 RLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            L    FK       +    +M   G++P+
Sbjct: 239 VLINGFFKMGLKKDGIELYEKMKLTGIVPN 268



 Score = 41.6 bits (96), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 38/234 (16%), Positives = 92/234 (39%), Gaps = 6/234 (2%)

Query: 71  IWCAKQRDYFH-DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIY 129
           + C  +RD    ++ S++ +I     + G  +    +  ++   G      T+ + +  +
Sbjct: 326 LMCRMKRDGLSPNLISYNTLIDGYCSI-GNLDKASSLFNQMKSSGQSPSLATYNILIAGF 384

Query: 130 WRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLS-- 187
              +    V +   EM   G +P+     I+MD L +   ++   ++    +    ++  
Sbjct: 385 SEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADI 444

Query: 188 --FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGL 245
             + + +  LC + D+     +   +      PN  ++  ++  +CK G    A +LL  
Sbjct: 445 YIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKE 504

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG 299
           M   G   +V ++   I    +  +   A  L + M++ G  P++  +  + K 
Sbjct: 505 MGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISKA 558


>gi|15226343|ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01740
 gi|4220475|gb|AAD12698.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250397|gb|AEC05491.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 123/523 (23%), Positives = 237/523 (45%), Gaps = 18/523 (3%)

Query: 45  PIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVR 104
           P     HI    L+N    +++L F  +    R Y     SF+ ++S V +L G+ +   
Sbjct: 21  PFTCNKHI--HQLINSNCGILSLKFLAYLV-SRGYTPHRSSFNSVVSFVCKL-GQVKFAE 76

Query: 105 GIVGELARVGCVIKAQTFLLFLRIYWR-GEM--YGMVLEAFDEMGRFGFTPNTFARNIVM 161
            IV  + R GC     ++   +  + R G++    +VLE+      F   P+  + N + 
Sbjct: 77  DIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLF 136

Query: 162 DVLFKIGRVD---LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYP 218
           +   K+  +D   + + V+ +   PN ++++  +   CK  ++         M R    P
Sbjct: 137 NGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSP 196

Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
           NV  F  L++ +CK G +  A  L   M  +  SL+V  +T LIDGF +   +  A  ++
Sbjct: 197 NVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMY 256

Query: 279 EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
            +MV++   PN + YT++I GF +      A  FL  + ++G   D+  + V+I  L   
Sbjct: 257 SRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGN 316

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVY 395
           G   +A ++ + + +  LVPD   F ++++    SGR      +   L     E D+V  
Sbjct: 317 GKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVAL 376

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
           + ++    K G  ++A+  +   ++K    ++  +  L+  LC      E   ++  I  
Sbjct: 377 STMIDGIAKNGQLHEAIVYF--CIEKA---NDVMYTVLIDALCKEGDFIEVERLFSKISE 431

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
                +  ++T+ +  L + G    A +L  R + E   LD+++YT  I GL   G   E
Sbjct: 432 AGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVE 491

Query: 516 AYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
           A  ++ +M +  + P++  + +++ ++ KE N+     LL D+
Sbjct: 492 ARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDM 534



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/364 (20%), Positives = 158/364 (43%), Gaps = 36/364 (9%)

Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
           + L  +++ G +   +++  ++    +L ++  A  +   M + GC P+V++Y SLI G 
Sbjct: 42  KFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGH 101

Query: 301 -MEAKMFSIAFSFLDMLESEGH--APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
                + S +     +  S G    PD+V  N L +  SKM   D+   VY G++     
Sbjct: 102 CRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVF-VYMGVM----- 155

Query: 358 PDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
                                   L C      ++V Y+  +  FCK+G    A+K +++
Sbjct: 156 ------------------------LKC---CSPNVVTYSTWIDTFCKSGELQLALKSFHS 188

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
           M     +P+  +F  L+ G C A  ++ A+++Y+ +     ++N   +TA++D   + G 
Sbjct: 189 MKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGE 248

Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
             +A +++ R + ++   + + YT  I G  + G ++ A    ++M +  +  +   Y V
Sbjct: 249 MQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGV 308

Query: 538 MLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLG 597
           ++   C    +K    +++D+  + +  D      +    FK     +AVN   ++   G
Sbjct: 309 IISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERG 368

Query: 598 LIPD 601
             PD
Sbjct: 369 FEPD 372



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/317 (21%), Positives = 131/317 (41%), Gaps = 36/317 (11%)

Query: 288 PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
           P+  T    I   + +    ++  FL  L S G+ P     N ++  + K+G    A D+
Sbjct: 19  PDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDI 78

Query: 348 YDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAG- 406
                                          +P+  C    E D++ YN+L+   C+ G 
Sbjct: 79  VHS----------------------------MPRFGC----EPDVISYNSLIDGHCRNGD 106

Query: 407 FPNQAVKLYNTMLDKGF--TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV 464
             + ++ L +     GF   PD  SF  L  G    + +DE   VY G+++   + N   
Sbjct: 107 IRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVF-VYMGVMLKCCSPNVVT 165

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
           ++  +D   ++G    A++ F     +    +VV++T  I G  + G  E A  LY +M+
Sbjct: 166 YSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMR 225

Query: 525 HIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSS 584
            + +  N  TY  ++  FCK+  ++  + +   +++ R+E +      +    F+   S 
Sbjct: 226 RVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSD 285

Query: 585 SAVNQLVEMCNLGLIPD 601
           +A+  L +M N G+  D
Sbjct: 286 NAMKFLAKMLNQGMRLD 302


>gi|224144893|ref|XP_002325452.1| predicted protein [Populus trichocarpa]
 gi|222862327|gb|EEE99833.1| predicted protein [Populus trichocarpa]
          Length = 864

 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 126/566 (22%), Positives = 242/566 (42%), Gaps = 86/566 (15%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFD---EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL 177
           T  L+ R+ ++    G+V + +D   EM   G  PN F  NI++    K+G + L + ++
Sbjct: 10  TLPLWNRLIYQFNATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGHLSLALDLI 69

Query: 178 KETQLP-NFLSFNIALCNLCKLNDVSNVKDVIGMMVRK--------------GF------ 216
           +   +  + +++N A+   C+    +     + +MV+K              GF      
Sbjct: 70  RNVDIDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILVKGFCRIGSV 129

Query: 217 -----------------------YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
                                   PN+  +  L++ +CK   ++EA  L   MI+ G   
Sbjct: 130 KYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYEEMISDGFLP 189

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
            V  ++ +I+G  +   L  A  L  +M + G +PN V Y  L+    +A     +F + 
Sbjct: 190 DVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFKAGSAWESFIYQ 249

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
             +   G + DLV    LID L K G  D+A  ++  L +L  +P++ T+ +++   C  
Sbjct: 250 SQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYTAMIDGYCKL 309

Query: 374 GRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
           G       L+  +E   V  ++V Y+++++ + K G  + AV++   MLD+   P+ Y +
Sbjct: 310 GDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMPNAYIY 369

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV-------------------------- 464
             L+ G   A K D A+++Y  + +N    N+ +                          
Sbjct: 370 ATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRKMEEAEGLCKYMMS 429

Query: 465 ---------HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
                    +T+++D   + GR   A  +  +        DVV+Y V I GLL  G+  +
Sbjct: 430 KGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNVLINGLLRLGKY-D 488

Query: 516 AYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTK 575
           A  +YS ++ + + P+  TY  M+ ++CK+  ++   +L  ++    +  +  T   L  
Sbjct: 489 AESVYSGIRELGLAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVG 548

Query: 576 FIFKFHSSSSAVNQLVEMCNLGLIPD 601
            + K   +  A++ L EM   G+ P+
Sbjct: 549 GLSKAGETERAIDVLNEMLLWGICPN 574



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 120/555 (21%), Positives = 231/555 (41%), Gaps = 29/555 (5%)

Query: 85  SFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDE 144
           ++  MI    +L G  +    ++ ++ +   V    T+   +  Y +  M  + +    +
Sbjct: 298 TYTAMIDGYCKL-GDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKK 356

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLND 200
           M      PN +    ++D   K G+ D  + +  E +L     N    +  + NL +   
Sbjct: 357 MLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRK 416

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
           +   + +   M+ KG   +   +  L++ F K GR + A+ +   M   G    V A+ V
Sbjct: 417 MEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNV 476

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           LI+G  RL + D A  ++  + + G +P+  TY ++I  + +      A    + ++   
Sbjct: 477 LINGLLRLGKYD-AESVYSGIRELGLAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHS 535

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL-- 378
             P+ +  N+L+  LSK G  + A+DV + +L   + P+     +LL+      R     
Sbjct: 536 VMPNSITCNILVGGLSKAGETERAIDVLNEMLLWGICPNVTIHRALLNACSKCERADTIL 595

Query: 379 -LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
            + K + G+ ++A+  VYN+L++  C  G   +A  + N M  +G + D  ++  L+ G 
Sbjct: 596 QMHKRLVGMGLKANREVYNSLITVLCGLGMTKRATLVLNNMTKEGISADTVTYNALIHGH 655

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
             +  I++A+  Y  ++    +     +  ++  L+ AG   KA ++  +        D 
Sbjct: 656 FKSSHIEKALATYTQMLNEGVSPGIRTYNLLLGGLLAAGLMSKAYEILSKMKDSGLDPDA 715

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
             Y   I G  + G  +EA   Y +M    + P   TY V++  F K   +   + LL +
Sbjct: 716 SLYNTLISGHGKIGNKKEAIKFYCEMVTKGLVPKTSTYNVLIEDFAKVGKMDQARELLNE 775

Query: 558 VIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLV-EMCNLGLIP--DEMWRKLGLLSDET 614
           +   R+                   +SS  + L+   CNL   P  D + +K       T
Sbjct: 776 MQVRRVP-----------------PNSSTYDILICGWCNLSKQPELDRISKKTYRTEART 818

Query: 615 MTPVSLFDGFVPCER 629
           +       GFVPCE 
Sbjct: 819 LFAEMNEKGFVPCEN 833



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 86/364 (23%), Positives = 157/364 (43%), Gaps = 23/364 (6%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV +++ +I+ + RL G+++    +   +  +G      T+   +  Y +       ++ 
Sbjct: 470 DVVAYNVLINGLLRL-GKYD-AESVYSGIRELGLAPDRATYNTMINAYCKQGKLENAIKL 527

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLC- 196
           ++EM      PN+   NI++  L K G  +  I VL E  L    PN ++ + AL N C 
Sbjct: 528 WNEMKGHSVMPNSITCNILVGGLSKAGETERAIDVLNEMLLWGICPN-VTIHRALLNACS 586

Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
           K      +  +   +V  G   N  ++  L+   C +G    A  +L  M   G S    
Sbjct: 587 KCERADTILQMHKRLVGMGLKANREVYNSLITVLCGLGMTKRATLVLNNMTKEGISADTV 646

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
            +  LI G  +   ++ A   + +M+  G SP + TY  L+ G + A + S A+  L  +
Sbjct: 647 TYNALIHGHFKSSHIEKALATYTQMLNEGVSPGIRTYNLLLGGLLAAGLMSKAYEILSKM 706

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
           +  G  PD   +N LI    K+G+  +A+  Y  ++   LVP + T+  L+      G+ 
Sbjct: 707 KDSGLDPDASLYNTLISGHGKIGNKKEAIKFYCEMVTKGLVPKTSTYNVLIEDFAKVGKM 766

Query: 377 SLLPKLVCGLEVE---ADLVVYNALLSYFC------------KAGFPNQAVKLYNTMLDK 421
               +L+  ++V     +   Y+ L+  +C            K  +  +A  L+  M +K
Sbjct: 767 DQARELLNEMQVRRVPPNSSTYDILICGWCNLSKQPELDRISKKTYRTEARTLFAEMNEK 826

Query: 422 GFTP 425
           GF P
Sbjct: 827 GFVP 830



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 78/316 (24%), Positives = 135/316 (42%), Gaps = 47/316 (14%)

Query: 288 PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
           P +  +  LI  F    + S  +     + S G  P++  HN+L+    KMG    ALD+
Sbjct: 9   PTLPLWNRLIYQFNATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGHLSLALDL 68

Query: 348 ------------YD----GLLELKLVPDSYTFCSLL---STVCLSGRFSLLPKLVCGL-- 386
                       Y+    G  +  L    + F S++    T   S   ++L K  C +  
Sbjct: 69  IRNVDIDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILVKGFCRIGS 128

Query: 387 ----------------------EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
                                  +E +LV Y  L+S +CK    ++A+ LY  M+  GF 
Sbjct: 129 VKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYEEMISDGFL 188

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAH--VHTAIVDRLIEAGRCHKAI 482
           PD  ++  ++ GLC    + EA  + +   M+   VN +  V+  +VD L +AG   ++ 
Sbjct: 189 PDVVTYSSIINGLCKRGMLTEAKALLRE--MDKMGVNPNHVVYAILVDSLFKAGSAWESF 246

Query: 483 QLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
               + IV     D+V  T  I GL + G+++EA  ++  +  +   PN  TY  M+  +
Sbjct: 247 IYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYTAMIDGY 306

Query: 543 CKERNIKMVKRLLQDV 558
           CK  ++   + LL+D+
Sbjct: 307 CKLGDMDGAESLLRDM 322



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 70/297 (23%), Positives = 124/297 (41%), Gaps = 8/297 (2%)

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
           M+ +    P L   N LI   +  G      D+Y  +L   ++P+ +T   L+   C  G
Sbjct: 1   MIRTHHIVPTLPLWNRLIYQFNATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMG 60

Query: 375 RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
             SL   L+  ++++ D V YN  +  FC+ G  NQ     + M+ K    D+++   L+
Sbjct: 61  HLSLALDLIRNVDIDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILV 120

Query: 435 RGLC--GARKIDEAI--NVYQGIVMNNPAVNAH----VHTAIVDRLIEAGRCHKAIQLFR 486
           +G C  G+ K  E +  N+   +  ++   N       +T ++    +     +A+ L+ 
Sbjct: 121 KGFCRIGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYE 180

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
             I + +  DVV+Y+  I GL + G   EA  L  +M  + V PN   Y +++ S  K  
Sbjct: 181 EMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFKAG 240

Query: 547 NIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
           +          +I   +  D      L   +FK   S  A      +  L  IP+ +
Sbjct: 241 SAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNI 297



 Score = 43.5 bits (101), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 16/119 (13%)

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLN 199
           EM   G  P T   N++++   K+G++D   ++L E Q+    PN  +++I +C  C L+
Sbjct: 740 EMVTKGLVPKTSTYNVLIEDFAKVGKMDQARELLNEMQVRRVPPNSSTYDILICGWCNLS 799

Query: 200 DV------------SNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
                         +  + +   M  KGF P       + + F + G + +A  +L  M
Sbjct: 800 KQPELDRISKKTYRTEARTLFAEMNEKGFVPCENTLACISSTFARPGMVVDAKHMLKDM 858


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 95/431 (22%), Positives = 201/431 (46%), Gaps = 7/431 (1%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET 180
           T+   +    +G+     +E    M + G  PN    N ++       +    I  LK+ 
Sbjct: 233 TYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKM 292

Query: 181 QL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
           +     P+ +++N  +  LCK    +  + +   M ++G  P++  +  LL  +   G +
Sbjct: 293 RSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGAL 352

Query: 237 AEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSL 296
            E + LL LM+  G     + + +LI  + +  ++D A  ++ KM Q+G +PNVVTY ++
Sbjct: 353 VEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAV 412

Query: 297 IKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
           I    ++     A  + + +  EG  P+++ +  LI  L     +D A ++   +L+  +
Sbjct: 413 IGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGI 472

Query: 357 VPDSYTFCSLLSTVCLSGRF---SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVK 413
             ++  F S++ + C  GR      L  L+  + V+ +++ Y+ L+  +C AG  ++A K
Sbjct: 473 CLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATK 532

Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
           L ++M   G  PD  ++  L+ G C   ++D+A+ +++ +V +  + N   +  I+  L 
Sbjct: 533 LLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLF 592

Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
              R   A +L+         L++ +Y + + GL +   T+EA  ++  +    +     
Sbjct: 593 HTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR 652

Query: 534 TYRVMLLSFCK 544
           T+ +M+ +  K
Sbjct: 653 TFNIMIGALLK 663



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 123/509 (24%), Positives = 215/509 (42%), Gaps = 49/509 (9%)

Query: 142 FDEMGRFG---FTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF----LSFNIALCN 194
           ++ M R G    TP      I++    + GR+DLG   L       F    ++F   L  
Sbjct: 72  YNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKG 131

Query: 195 LCKLNDVSNVKD-VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT---LG 250
           LC     S+  D V+  M      P+V    ILL   C   R  EA +LL +M      G
Sbjct: 132 LCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGG 191

Query: 251 TSLSVNAWTVLIDGF------------------RRL-----------------RRLDMAG 275
           ++  V ++T +I+GF                  RR+                 + +D A 
Sbjct: 192 SAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAM 251

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
            +   MV+NG  PN +TY S++ G+  ++    A  FL  + S+G  PD+V +N L+D L
Sbjct: 252 EVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYL 311

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG---RFSLLPKLVCGLEVEADL 392
            K G   +A  ++D + +  L PD  T+C+LL      G       L  L+    +  D 
Sbjct: 312 CKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDH 371

Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
            V+N L+  + K    ++A+ +++ M   G  P+  ++  ++  LC +  +D+A+  ++ 
Sbjct: 372 HVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQ 431

Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
           ++      N  V+T+++  L    +  KA +L    +     L+ + +   I    + GR
Sbjct: 432 MIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGR 491

Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
             E+  L+  M  I V PN  TY  ++  +C    +    +LL  +    ++ D  T   
Sbjct: 492 VIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNT 551

Query: 573 LTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           L     +      A+    EM + G+ P+
Sbjct: 552 LINGYCRVSRMDDALALFKEMVSSGVSPN 580



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 100/467 (21%), Positives = 202/467 (43%), Gaps = 7/467 (1%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCK 197
           + EM     +P+    + ++  L K   +D  ++VL    K   +PN +++N  L   C 
Sbjct: 219 YHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCS 278

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
                     +  M   G  P+V  +  L++  CK GR  EA ++   M   G    +  
Sbjct: 279 SEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIAT 338

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  L+ G+     L     L + MV+NG  P+   +  LI  + + +    A      + 
Sbjct: 339 YCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMR 398

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G  P++V +  +I  L K GS DDA+  ++ +++  L P+   + SL+ ++C+  ++ 
Sbjct: 399 QHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWD 458

Query: 378 LLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
              +L+  +    +  + + +N+++   CK G   ++ KL++ M+  G  P+  ++  L+
Sbjct: 459 KAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLI 518

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            G C A K+DEA  +   +       +   +  +++      R   A+ LF+  +     
Sbjct: 519 DGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVS 578

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
            ++++Y + ++GL    RT  A  LY  +          TY ++L   CK        R+
Sbjct: 579 PNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRM 638

Query: 555 LQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            Q++    ++L+  T   +   + K   +  A +    +   GL+PD
Sbjct: 639 FQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 685



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 83/370 (22%), Positives = 153/370 (41%), Gaps = 42/370 (11%)

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
           + R G       F + +  Y + E     +  F +M + G  PN      V+ +L K G 
Sbjct: 362 MVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGS 421

Query: 170 VDLGI----KVLKETQLPNFLS-----------------------------------FNI 190
           VD  +    +++ E   PN +                                    FN 
Sbjct: 422 VDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNS 481

Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
            + + CK   V   + +  +MVR G  PNV  +  L++ +C  G++ EA +LL  M ++G
Sbjct: 482 IIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVG 541

Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
                  +  LI+G+ R+ R+D A  L+++MV +G SPN++TY  +++G    +  + A 
Sbjct: 542 MKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 601

Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
                +   G   +L  +N+++  L K    D+AL ++  L    L  ++ TF  ++  +
Sbjct: 602 ELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGAL 661

Query: 371 CLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
              GR      L   L       D+  Y+ +     + G   +   L+ +M + G T ++
Sbjct: 662 LKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANS 721

Query: 428 YSFVGLLRGL 437
                ++R L
Sbjct: 722 RMLNSIVRKL 731



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/228 (21%), Positives = 91/228 (39%), Gaps = 4/228 (1%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           L G+ +    ++  +  VG      T+   +  Y R       L  F EM   G +PN  
Sbjct: 523 LAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNII 582

Query: 156 ARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
             NI++  LF   R     +L + + K        ++NI L  LCK N       +   +
Sbjct: 583 TYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 642

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
                    R F I++    K+GR  EA  L   +   G    V  ++++ +       L
Sbjct: 643 CLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLL 702

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
           +    L+  M +NGC+ N     S+++  ++    + A ++L M++ +
Sbjct: 703 EELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLSMIDEK 750


>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
          Length = 798

 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 99/435 (22%), Positives = 194/435 (44%), Gaps = 7/435 (1%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCK 197
           FDEM   GF P+    + ++D L K   ++    +L+    +  +PN  ++NI +   C 
Sbjct: 226 FDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCS 285

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
           L  +     ++  M   G  P+V  + +L+  +CK+GR AEA  +   M+  G   +   
Sbjct: 286 LGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTI 345

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           + +L+ G+     L     L + M+++G       +  LI  + +      A +    + 
Sbjct: 346 YHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMR 405

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
             G  PD+V ++ +I  L K+G  +DA+  ++ ++   L P+  +F SL+  +C  G + 
Sbjct: 406 QNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWK 465

Query: 378 LLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
            + +L   +    +  D +  N ++   CK G   +A   ++ ++  G  P+  S+  L+
Sbjct: 466 KVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLI 525

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
            G C   K+DE+I  +  +V      ++  + A+++   + GR   A+ L+R    +   
Sbjct: 526 DGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVK 585

Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
              ++  + + GL + GR   A  LY +M          TY  +L   C+   +    R+
Sbjct: 586 FCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRM 645

Query: 555 LQDVIDARIELDYHT 569
            +D+     ELD  T
Sbjct: 646 FEDLRSKEFELDVWT 660



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 113/506 (22%), Positives = 224/506 (44%), Gaps = 77/506 (15%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNV 204
           G  PNT   NI++     +G+++  +++LK+       P+ +++ + +   CK+   +  
Sbjct: 268 GVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEA 327

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLI-- 262
           + V   MVRKG  PN  ++ ILL+ +   G + +   LL LMI  G      A+ +LI  
Sbjct: 328 RSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICA 387

Query: 263 -------------------DGFR--------------RLRRLDMAGYLWEKMVQNGCSPN 289
                              +G R              ++ R++ A Y + +MV  G SPN
Sbjct: 388 YAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPN 447

Query: 290 VVTYTSLIKG---------------------------FMEAKMFSI--------AFSFLD 314
           ++++TSLI G                           FM   M ++        A  F D
Sbjct: 448 IISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFD 507

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
           M+   G  P++V +N LID    +G  D+++  +D ++ + L PDS+T+ +LL+    +G
Sbjct: 508 MVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNG 567

Query: 375 RFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
           R      L + +   +V+   +  N +L    +AG    A +LY  M+D+G      ++ 
Sbjct: 568 RVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYN 627

Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
            +L GLC    +DEA+ +++ +      ++      +++ L++ GR  +A  LF   ++ 
Sbjct: 628 TVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLR 687

Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
                V++Y++ I+  +E G  EE+  L+  M+      +++   V++    ++ +++  
Sbjct: 688 GPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLEKGDVRRA 747

Query: 552 KRLLQDVIDARIELDYHTSIRLTKFI 577
              L  + +    ++  T+  L   +
Sbjct: 748 GTYLTKIDEKNFSVEASTAALLIPIV 773



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 99/421 (23%), Positives = 190/421 (45%), Gaps = 16/421 (3%)

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-------PNFLSFNIALCN 194
           F  M   G+TP+ F+ N ++  L    +    +++L            PN +S++  +  
Sbjct: 153 FRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDG 212

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
             K  +V     +   M+ +GF P+V  +  L++  CK   + +A  +L  M   G   +
Sbjct: 213 FFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPN 272

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
              + ++I G+  L +L+ A  L +KM  +G  P+VVTY  LI+ + +    + A S  D
Sbjct: 273 TRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFD 332

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            +  +G  P+   +++L+   +  G+  D  D+ D L+    +P  +   ++L  +C   
Sbjct: 333 SMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLD-LMIRDGIPFEHRAFNIL--ICAYA 389

Query: 375 RFSLLPKLVCGLE------VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
           +   + K +          +  D+V Y+ ++   CK G    AV  +N M+ +G +P+  
Sbjct: 390 KHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNII 449

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
           SF  L+ GLC   +  +   +   ++      +A     I+D L + GR  +A   F   
Sbjct: 450 SFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMV 509

Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
           I      +VVSY   I G    G+ +E+   + +M  I + P+++TY  +L  + K   +
Sbjct: 510 IHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRV 569

Query: 549 K 549
           +
Sbjct: 570 E 570



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 128/280 (45%), Gaps = 7/280 (2%)

Query: 329 NVLIDCLSKMGSYDDALD-VYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLV 383
           N LI  L      DDA+D V+  + EL   PD +++ +L+  +C+  +      LL  + 
Sbjct: 133 NQLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMT 192

Query: 384 C--GLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
              G     ++V Y+ ++  F K G  ++A  L++ M+ +GF PD  ++  L+ GLC A+
Sbjct: 193 ADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQ 252

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYT 501
            +++A  + Q +       N   +  ++      G+  +A++L ++        DVV+Y 
Sbjct: 253 AMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYI 312

Query: 502 VAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
           + I+   + GR  EA  ++  M      PN+  Y ++L  +  +  +  V+ LL  +I  
Sbjct: 313 LLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRD 372

Query: 562 RIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            I  ++     L     K  +   A+    EM   GL PD
Sbjct: 373 GIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPD 412



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/330 (23%), Positives = 138/330 (41%), Gaps = 38/330 (11%)

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE------------ 389
           +DAL+++D LL        + F S+L TV      S  P+    L V             
Sbjct: 31  EDALNLFDELLPQARPASVHAFNSVL-TVVARADSSSSPRHSAALAVSLFNTMARSGVNM 89

Query: 390 --ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
             A+  +   L+  FC  G  + A   +   L  G+   N +   L++GLC  ++ D+A+
Sbjct: 90  MAANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAM 149

Query: 448 N-VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE---KYPLDVVSYTVA 503
           + V++ +       +   + A++  L    +  +A++L      +       +VVSY+  
Sbjct: 150 DMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTI 209

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           I G  + G  ++AY L+ +M     PP+  TY  ++   CK + +   + +LQ + D  +
Sbjct: 210 IDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGV 269

Query: 564 ELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD--------EMWRKLGLLSDETM 615
             +  T   + +          AV  L +M   GL PD        + + K+G  ++   
Sbjct: 270 MPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEAR- 328

Query: 616 TPVSLFDGFVPCERRAGNAN----HLLLNG 641
              S+FD  V   R+    N    H+LL+G
Sbjct: 329 ---SVFDSMV---RKGQKPNSTIYHILLHG 352



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/256 (21%), Positives = 108/256 (42%), Gaps = 14/256 (5%)

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
           +  +G    + T+   L  Y++       L  + EM R          NI++  LF+ GR
Sbjct: 544 MVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGR 603

Query: 170 V----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEI 225
           +    +L +K++         ++N  L  LC+ + V     +   +  K F  +V  F I
Sbjct: 604 IVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNI 663

Query: 226 LLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
           ++N   K+GRI EA  L   M+  G    V  ++++I        L+ +  L+  M +NG
Sbjct: 664 VINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNG 723

Query: 286 CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL 345
           C+ +      +I+  +E      A ++L  ++ +  + +     +LI  +S+   Y    
Sbjct: 724 CAADSHMLNVIIRRLLEKGDVRRAGTYLTKIDEKNFSVEASTAALLIPIVSEK-KYQK-- 780

Query: 346 DVYDGLLELKLVPDSY 361
                  E+K +P+ Y
Sbjct: 781 -------EVKFLPEKY 789


>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
 gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
          Length = 796

 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 106/485 (21%), Positives = 206/485 (42%), Gaps = 8/485 (1%)

Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET 180
           TF L +  +         L     M  FG +P+    N +++   + G +     +L   
Sbjct: 210 TFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARM 269

Query: 181 Q----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
           +     P   ++N  +    +L  +     V+  M   GF P++R + +L    C+ G++
Sbjct: 270 KRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKV 329

Query: 237 AEAYQLLGLMITLGTSL-SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
            EA++L   M  L T+L  V  +  L+D   + R    A  L E+M   G  P +VT+  
Sbjct: 330 DEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNI 389

Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
           ++K   +      A   L+ +  EG APD++ +N LID   K G+   A  + D ++   
Sbjct: 390 VVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKG 449

Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAV 412
           L  D++T  ++L  +C   R+    +L+          D V Y  +++ + K   P  A+
Sbjct: 450 LKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPAL 509

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
           +L++ M+++   P   ++  L++GLC   ++ EAI+    +V      +   +  I+   
Sbjct: 510 RLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAY 569

Query: 473 IEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNA 532
            + G    A +   + +   +  DVV+    + GL   G+ ++A  L+          + 
Sbjct: 570 CKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDV 629

Query: 533 YTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVE 592
            TY  ++ S CK  ++        D+    ++ D  T   +   + +   S  A N L +
Sbjct: 630 ITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHK 689

Query: 593 MCNLG 597
           + + G
Sbjct: 690 LADSG 694



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 114/513 (22%), Positives = 216/513 (42%), Gaps = 55/513 (10%)

Query: 52  IVHSTLLN--CPSDLIALSFFIWCAKQRDYFHDVQ-SFDHMISVVTRLTGRFETVRGIVG 108
           + ++TLLN  C   ++  +  +    +RD     Q +++ ++S   RL        G + 
Sbjct: 244 VTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARL--------GWIK 295

Query: 109 ELARVGCVIKAQTFLLFLRIYWRGEM----YGMVLEAF---DEMGRFGFT-PNTFARNIV 160
           +  +V   + A  F   LR Y    +     G V EAF   DEM R     P+    N +
Sbjct: 296 QATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTL 355

Query: 161 MDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
           +D  FK       +++L+E +     P  ++ NI + +LCK   +      +  +  +G 
Sbjct: 356 VDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGL 415

Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
            P+V  +  L++ +CK G +A+A+ L+  M+  G  +       ++    +++R + A  
Sbjct: 416 APDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEE 475

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           L     Q G  P+ V+Y +++  + +      A    D +      P +  +N LI  L 
Sbjct: 476 LLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLC 535

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYN 396
           +M    +A+D  + L+E  LVPD  T                                YN
Sbjct: 536 RMERLKEAIDKLNELVEKGLVPDETT--------------------------------YN 563

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            ++  +CK G    A + +N M++  F PD  +   L+ GLC   K+D+A+ +++  V  
Sbjct: 564 IIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEK 623

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
              V+   +  ++  + + G    A+  F    V+    D  +Y V +  L E GR+EEA
Sbjct: 624 GKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEA 683

Query: 517 YILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
           + +  ++        ++   ++  S   E ++K
Sbjct: 684 HNMLHKLADSGKLSQSFACPLLKPSSADEADVK 716



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/430 (23%), Positives = 192/430 (44%), Gaps = 10/430 (2%)

Query: 147 RFGFTPNTFARNIVMDVLFK----IGRVDLGI-KVLKETQL-PNFLSFNIALCNLCKLND 200
           R G  P+  A N V+  L +    + +  L + + L E +L PN  +FN+ +   C    
Sbjct: 164 RRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGT 223

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
           +++    +  M   G  P+   +  LLN  C+ G + EA  LL  M   G + +   +  
Sbjct: 224 LADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNT 283

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           L+  F RL  +  A  + E M   G  P++ TY  L  G  +A     AF   D +E   
Sbjct: 284 LVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLS 343

Query: 321 HA-PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF-SL 378
            A PD+V +N L+D   K     DAL + + + +  + P   T   ++ ++C  G+    
Sbjct: 344 TALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEA 403

Query: 379 LPKL--VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
           L KL  +    +  D++ YN L+  +CKAG   +A  L + M+ KG   D ++   +L  
Sbjct: 404 LGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYN 463

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
           LC  ++ ++A  +           +   +  ++    +      A++L+ + I  K    
Sbjct: 464 LCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPS 523

Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
           + +Y   I+GL    R +EA    +++    + P+  TY +++ ++CKE +++   R   
Sbjct: 524 ISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHN 583

Query: 557 DVIDARIELD 566
            +++   + D
Sbjct: 584 KMVENSFKPD 593



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/472 (21%), Positives = 205/472 (43%), Gaps = 10/472 (2%)

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCN 194
           L+ F  +      PN +  N+++      G +   +  L   Q     P+ +++N  L  
Sbjct: 193 LDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNA 252

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
            C+   +   + ++  M R G  P    +  L++ F ++G I +A +++  M   G    
Sbjct: 253 HCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPD 312

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCS-PNVVTYTSLIKGFMEAKMFSIAFSFL 313
           +  + VL  G  +  ++D A  L ++M +   + P+VVTY +L+    + +  S A   L
Sbjct: 313 LRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLL 372

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           + +  +G  P LV HN+++  L K G  ++AL   + + E  L PD  T+ +L+   C +
Sbjct: 373 EEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKA 432

Query: 374 GR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
           G     F+L+ ++V G  ++ D    N +L   CK      A +L ++   +GF PD  S
Sbjct: 433 GNVAKAFTLMDEMV-GKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVS 491

Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
           +  ++         + A+ ++  ++      +   +  ++  L    R  +AI      +
Sbjct: 492 YGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELV 551

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
            +    D  +Y + I    + G  E A+  +++M   +  P+  T   ++   C    + 
Sbjct: 552 EKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLD 611

Query: 550 MVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
              +L +  ++   ++D  T   L + + K     +A++   +M   GL PD
Sbjct: 612 KALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPD 663



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 93/397 (23%), Positives = 163/397 (41%), Gaps = 31/397 (7%)

Query: 206 DVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF 265
           DV   ++    +PN   F +L++  C  G +A+A   L  M   G S     +  L++  
Sbjct: 194 DVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAH 253

Query: 266 RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL 325
            R   L  A  L  +M ++G +P   TY +L+  F        A   ++ + + G  PDL
Sbjct: 254 CRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDL 313

Query: 326 VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCG 385
             +NVL   L + G  D+A  + D +  L                      + LP     
Sbjct: 314 RTYNVLAVGLCQAGKVDEAFRLKDEMERLS---------------------TALP----- 347

Query: 386 LEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
                D+V YN L+    K    + A++L   M DKG  P   +   +++ LC   K++E
Sbjct: 348 -----DVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEE 402

Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
           A+   + I     A +   +  ++D   +AG   KA  L    + +   +D  +    + 
Sbjct: 403 ALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLY 462

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
            L +  R E+A  L          P+  +Y  ++ ++ KE N +   RL   +I+ ++  
Sbjct: 463 NLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIP 522

Query: 566 DYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
              T   L K + +      A+++L E+   GL+PDE
Sbjct: 523 SISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDE 559



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 83/343 (24%), Positives = 154/343 (44%), Gaps = 16/343 (4%)

Query: 113 VGCVIKAQTFLLFLRIYWRGEM--YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV 170
           VG  +K  TF L   +Y   +M  Y    E      + GF P+  +   VM   FK    
Sbjct: 446 VGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNP 505

Query: 171 DLGIKV----LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEIL 226
           +  +++    ++   +P+  ++N  +  LC++  +    D +  +V KG  P+   + I+
Sbjct: 506 EPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNII 565

Query: 227 LNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGC 286
           ++ +CK G +  A++    M+       V     L++G     +LD A  L+E  V+ G 
Sbjct: 566 IHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGK 625

Query: 287 SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALD 346
             +V+TY +LI+   +      A  F D +E +G  PD   +NV++  LS+ G  ++A +
Sbjct: 626 KVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHN 685

Query: 347 VYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE-ADLVVYNALLSY---- 401
           +   L +   +  S+  C LL     S   + + +     E E ++    NAL +Y    
Sbjct: 686 MLHKLADSGKLSQSFA-CPLLKPS--SADEADVKEHEGKPEAESSEKAQDNALETYMERL 742

Query: 402 --FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
              C  G   +A  + + M+ KG   D+ +++ L+ GL   +K
Sbjct: 743 NGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIKRQK 785


>gi|414876286|tpg|DAA53417.1| TPA: hypothetical protein ZEAMMB73_373649 [Zea mays]
          Length = 561

 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 118/421 (28%), Positives = 196/421 (46%), Gaps = 17/421 (4%)

Query: 131 RGE-MYGMVLEAFDEMG---RFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL---- 182
           RG+ M G + ++F   G   + G   N  A N  +D L K GR     K+ +        
Sbjct: 24  RGKRMSGHIHKSFRLTGQNCKLGIVANLLACNAWIDRLGKDGRYREAEKLFRGMADRGLD 83

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           PN +++ I + +LCK   + +   +   M  KG    V  +  L+N +CK     +A  L
Sbjct: 84  PNEVTYAILIHSLCKRGMMEDALCMFDRMREKGIRMTVYPYNSLINGYCKHNNFHQARGL 143

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF-M 301
           L  M+  G + S  +++ LI G  R   L  A  L  +M +N  S NV T+T+LI GF  
Sbjct: 144 LNEMVAKGLTPSPASYSPLIAGLCRKGDLASAMELHREMTRNAVSGNVYTFTALISGFCK 203

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           +  M      F  M+ES    P+ V  NV+I+   ++G+   A  +YD +L+  L PD+Y
Sbjct: 204 DGNMDEATRLFHKMMESS-LVPNEVTFNVMIEGYCRVGNIRKAFQLYDQMLDRGLTPDNY 262

Query: 362 TFCSLLSTVCLSGRFSLLPKLVCGLEVEADLV---VYNALLSYFCKAGFPNQAVKLYNTM 418
           T+ SL+S VCL+       + V  LE    ++      AL+  FCK G    A  L   M
Sbjct: 263 TYRSLISVVCLTLGAMKAKEFVADLENNCAVLNSFSLTALMHGFCKEG---SAEILCKEM 319

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
           L   F P++Y++   L  L    ++++A  V    ++     N      ++     AG+ 
Sbjct: 320 LAGHFLPNSYTYNCFLDYLANEGELEKA-KVLHAAMLEGCLANTVTFNTLIKGFCMAGQI 378

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
             AI L ++     +  D +SY+  I  L + G T +A+ L+++M +  + P+   Y ++
Sbjct: 379 QGAIDLMQKNTESGFFPDCISYSTIINELCKVGDTNKAFELWNEMLYKGLKPDIVAYTIL 438

Query: 539 L 539
           +
Sbjct: 439 I 439



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/288 (25%), Positives = 131/288 (45%), Gaps = 12/288 (4%)

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
           G   +L+  N  ID L K G Y +A  ++ G+ +  L P+  T+  L+ ++C  G   ++
Sbjct: 46  GIVANLLACNAWIDRLGKDGRYREAEKLFRGMADRGLDPNEVTYAILIHSLCKRG---MM 102

Query: 380 PKLVCGLE------VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
              +C  +      +   +  YN+L++ +CK    +QA  L N M+ KG TP   S+  L
Sbjct: 103 EDALCMFDRMREKGIRMTVYPYNSLINGYCKHNNFHQARGLLNEMVAKGLTPSPASYSPL 162

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           + GLC    +  A+ +++ +  N  + N +  TA++    + G   +A +LF + +    
Sbjct: 163 IAGLCRKGDLASAMELHREMTRNAVSGNVYTFTALISGFCKDGNMDEATRLFHKMMESSL 222

Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
             + V++ V I G    G   +A+ LY QM    + P+ YTYR ++   C        K 
Sbjct: 223 VPNEVTFNVMIEGYCRVGNIRKAFQLYDQMLDRGLTPDNYTYRSLISVVCLTLGAMKAKE 282

Query: 554 LLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            + D+ +    L+   S  LT  +  F    SA     EM     +P+
Sbjct: 283 FVADLENNCAVLN---SFSLTALMHGFCKEGSAEILCKEMLAGHFLPN 327



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 87/399 (21%), Positives = 155/399 (38%), Gaps = 73/399 (18%)

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
           + N L+ N  +  L K       + +   M  +G  PN   + IL++  CK G + +A  
Sbjct: 48  VANLLACNAWIDRLGKDGRYREAEKLFRGMADRGLDPNEVTYAILIHSLCKRGMMEDALC 107

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
           +   M   G  ++V  +  LI+G+ +      A  L  +MV  G +P+  +Y+ LI G  
Sbjct: 108 MFDRMREKGIRMTVYPYNSLINGYCKHNNFHQARGLLNEMVAKGLTPSPASYSPLIAGLC 167

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
                + A      +     + ++     LI    K G+ D+A  ++  ++E  LVP+  
Sbjct: 168 RKGDLASAMELHREMTRNAVSGNVYTFTALISGFCKDGNMDEATRLFHKMMESSLVPNEV 227

Query: 362 TFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
           TF                                N ++  +C+ G   +A +LY+ MLD+
Sbjct: 228 TF--------------------------------NVMIEGYCRVGNIRKAFQLYDQMLDR 255

Query: 422 GFTPDNYSFVGLLRGLC---GARKIDEAINVYQGIVMNNPAV------------------ 460
           G TPDNY++  L+  +C   GA K  E    +   + NN AV                  
Sbjct: 256 GLTPDNYTYRSLISVVCLTLGAMKAKE----FVADLENNCAVLNSFSLTALMHGFCKEGS 311

Query: 461 ---------------NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
                          N++ +   +D L   G   KA ++   A++E    + V++   I+
Sbjct: 312 AEILCKEMLAGHFLPNSYTYNCFLDYLANEGELEKA-KVLHAAMLEGCLANTVTFNTLIK 370

Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
           G    G+ + A  L  +       P+  +Y  ++   CK
Sbjct: 371 GFCMAGQIQGAIDLMQKNTESGFFPDCISYSTIINELCK 409



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 93/397 (23%), Positives = 171/397 (43%), Gaps = 42/397 (10%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR+     +   +A  G      T+ + +    +  M    L  FD M   G     +  
Sbjct: 65  GRYREAEKLFRGMADRGLDPNEVTYAILIHSLCKRGMMEDALCMFDRMREKGIRMTVYPY 124

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N +++   K         +L E       P+  S++  +  LC+  D+++  ++   M R
Sbjct: 125 NSLINGYCKHNNFHQARGLLNEMVAKGLTPSPASYSPLIAGLCRKGDLASAMELHREMTR 184

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
                NV  F  L++ FCK G + EA +L   M+      +   + V+I+G+ R+  +  
Sbjct: 185 NAVSGNVYTFTALISGFCKDGNMDEATRLFHKMMESSLVPNEVTFNVMIEGYCRVGNIRK 244

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIK------GFMEAKMFSI----------AFSFLDMLE 317
           A  L+++M+  G +P+  TY SLI       G M+AK F            +FS   ++ 
Sbjct: 245 AFQLYDQMLDRGLTPDNYTYRSLISVVCLTLGAMKAKEFVADLENNCAVLNSFSLTALMH 304

Query: 318 S---EGHA-------------PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
               EG A             P+   +N  +D L+  G  + A  ++  +LE   + ++ 
Sbjct: 305 GFCKEGSAEILCKEMLAGHFLPNSYTYNCFLDYLANEGELEKAKVLHAAMLE-GCLANTV 363

Query: 362 TFCSLLSTVCLSGRFSLLPKLVCGLEVEA----DLVVYNALLSYFCKAGFPNQAVKLYNT 417
           TF +L+   C++G+      L+     E+    D + Y+ +++  CK G  N+A +L+N 
Sbjct: 364 TFNTLIKGFCMAGQIQGAIDLM-QKNTESGFFPDCISYSTIINELCKVGDTNKAFELWNE 422

Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           ML KG  PD  ++  L+R      + D+ + +Y  +V
Sbjct: 423 MLYKGLKPDIVAYTILIRWCNIHGEFDKGLGIYSDMV 459



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/218 (22%), Positives = 98/218 (44%)

Query: 384 CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
           C L + A+L+  NA +    K G   +A KL+  M D+G  P+  ++  L+  LC    +
Sbjct: 43  CKLGIVANLLACNAWIDRLGKDGRYREAEKLFRGMADRGLDPNEVTYAILIHSLCKRGMM 102

Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
           ++A+ ++  +      +  + + ++++   +    H+A  L    + +       SY+  
Sbjct: 103 EDALCMFDRMREKGIRMTVYPYNSLINGYCKHNNFHQARGLLNEMVAKGLTPSPASYSPL 162

Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           I GL   G    A  L+ +M   AV  N YT+  ++  FCK+ N+    RL   ++++ +
Sbjct: 163 IAGLCRKGDLASAMELHREMTRNAVSGNVYTFTALISGFCKDGNMDEATRLFHKMMESSL 222

Query: 564 ELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
             +  T   + +   +  +   A     +M + GL PD
Sbjct: 223 VPNEVTFNVMIEGYCRVGNIRKAFQLYDQMLDRGLTPD 260


>gi|297849764|ref|XP_002892763.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297338605|gb|EFH69022.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 804

 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 111/460 (24%), Positives = 204/460 (44%), Gaps = 57/460 (12%)

Query: 152 PNTFARNIVMDVLFKIGRVDLG----IKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDV 207
           P+  + N +M    K+G VD+       VLK   +P+  S NI +  LC +  ++   ++
Sbjct: 239 PSVVSFNSIMSSYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 298

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
              M + G  P+   + IL+  F  +G I+ A +++  M+  G S  V  +T+L+ G  +
Sbjct: 299 ASDMNKHGVEPDSVTYNILVKGFHLLGMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQ 358

Query: 268 LRRLDMAGYLWEKMVQNGCS-PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
           L  +DM   L + M+  G    +++ Y+ ++ G  +      A S    LE+ G  PDLV
Sbjct: 359 LGNIDMGLILLKDMLSRGFELKSIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLV 418

Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF----SLLPKL 382
            ++++I  L K+G +D A+ VYD +   +++P+S T  +++  +C  G      SLL  L
Sbjct: 419 AYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSL 478

Query: 383 VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
           +   +   D+++YN ++  + K+G   +A++L+   ++ G TP+  +F  L+ G C  + 
Sbjct: 479 ISSGDT-LDIILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQN 537

Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTV 502
           I EA  +   I +     +   +T ++D     G      +L R    E  P   V+Y+V
Sbjct: 538 IAEARKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSV 597

Query: 503 AIRGLLEGGRTE-----------------------------------------------E 515
             +GL  G + E                                                
Sbjct: 598 IFKGLCRGWKLENCNQVLRERILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVKHLSR 657

Query: 516 AYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
           A+ L+ +MK   + P + TY +++ S C    I+   R L
Sbjct: 658 AFELFKKMKSQNLDPTSATYNILIDSLCIYGCIRKADRFL 697



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/411 (23%), Positives = 186/411 (45%), Gaps = 37/411 (9%)

Query: 153 NTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVI 208
           N    + V+D L +  +++  +  L+ ++     P+ +SFN  + + CKL  V   K   
Sbjct: 205 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSFF 264

Query: 209 GMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRL 268
             +++ G  P+V    IL+N  C +G IAEA +L   M   G       + +L+ GF  L
Sbjct: 265 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLL 324

Query: 269 RRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL-DMLESEGHAPDLVF 327
             +  AG + + M+  G SP+V+TYT L+ G  +     +    L DML        ++ 
Sbjct: 325 GMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSIIP 384

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE 387
           ++V++  L K G  D+AL ++  L    L PD                            
Sbjct: 385 YSVMLSGLCKTGRVDEALSLFYDLEAYGLTPD---------------------------- 416

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
               LV Y+ ++   CK G  + AV++Y+ M  K   P++ +   ++ GLC    + EA 
Sbjct: 417 ----LVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEAR 472

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
           ++   ++ +   ++  ++  ++D   ++G   +A++LF+ AI      +V ++   I G 
Sbjct: 473 SLLDSLISSGDTLDIILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGY 532

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
            +     EA  +   +K   + P+  +Y  ++ ++    +IK ++ L +++
Sbjct: 533 CKTQNIAEARKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREM 583



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 101/397 (25%), Positives = 179/397 (45%), Gaps = 32/397 (8%)

Query: 163 VLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
           VL+     D    V KE +  N  +++  +  LC+   + +    +     K   P+V  
Sbjct: 184 VLYNFRETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVS 243

Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
           F  +++ +CK+G +  A      ++  G   SV +  +LI+G   +  +  A  L   M 
Sbjct: 244 FNSIMSSYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMN 303

Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
           ++G  P+ VTY  L+KGF    M S A   +  +  +G +PD++ + +L+    ++G+ D
Sbjct: 304 KHGVEPDSVTYNILVKGFHLLGMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNID 363

Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYF 402
                  GL+ LK          +LS                G E+++ ++ Y+ +LS  
Sbjct: 364 M------GLILLK---------DMLSR---------------GFELKS-IIPYSVMLSGL 392

Query: 403 CKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNA 462
           CK G  ++A+ L+  +   G TPD  ++  ++ GLC   K D A+ VY  +       N+
Sbjct: 393 CKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNS 452

Query: 463 HVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQ 522
               AI+  L + G   +A  L    I     LD++ Y + I G  + G  EEA  L+  
Sbjct: 453 RTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIEEALELFKV 512

Query: 523 MKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
                + PN  T+  ++  +CK +NI   +++L DVI
Sbjct: 513 AIESGITPNVATFNSLIYGYCKTQNIAEARKIL-DVI 548



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 87/403 (21%), Positives = 180/403 (44%), Gaps = 19/403 (4%)

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           ++++  L K GRVD  + +  + +     P+ ++++I +  LCKL        V   M  
Sbjct: 386 SVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCY 445

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           K   PN R    ++   C+ G + EA  LL  +I+ G +L +  + ++IDG+ +   ++ 
Sbjct: 446 KRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIEE 505

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L++  +++G +PNV T+ SLI G+ + +  + A   LD+++  G  P +V +  L+D
Sbjct: 506 ALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTLMD 565

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---------LLPK--- 381
             +  GS     ++   +    + P + T+  +   +C   +           +L K   
Sbjct: 566 AYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRERILEKFNH 625

Query: 382 LVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
           ++  +E E    D + YN ++ Y C+    ++A +L+  M  +   P + ++  L+  LC
Sbjct: 626 VLRDMESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSATYNILIDSLC 685

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
               I +A      +   N +++   +T ++      G    A+ LF + +   + + + 
Sbjct: 686 IYGCIRKADRFLYSLQKRNVSLSKFAYTTVIKAHCVKGDPEMAVILFNQLLDRGFNVSIR 745

Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
            Y+  I  L       E+   +  M    + P+     VM+ S
Sbjct: 746 DYSAVINRLCRRHLAIESKYFFCLMLSRGISPDLDICEVMIKS 788



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 91/380 (23%), Positives = 182/380 (47%), Gaps = 23/380 (6%)

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE-- 279
           ++++LL    ++  + E+  +L  M     ++S  ++  ++  FR   ++      W+  
Sbjct: 145 VWDMLLFLSSRLRMVDESLYILKKMKDRNLNVSTQSYNSVLYNFRETDKM------WDVY 198

Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
           K +++    N  TY++++ G    +    A  FL   E +   P +V  N ++    K+G
Sbjct: 199 KEIKD---KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLG 255

Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYN 396
             D A   +  +L+  LVP  Y+   L++ +CL G  +   +L   +    VE D V YN
Sbjct: 256 FVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYN 315

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
            L+  F   G  + A ++   MLDKG +PD  ++  LL G C    ID  + + + ++  
Sbjct: 316 ILVKGFHLLGMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSR 375

Query: 457 NPAVNAHV-HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL--DVVSYTVAIRGLLEGGRT 513
              + + + ++ ++  L + GR  +A+ LF    +E Y L  D+V+Y++ I GL + G+ 
Sbjct: 376 GFELKSIIPYSVMLSGLCKTGRVDEALSLFYD--LEAYGLTPDLVAYSIVIHGLCKLGKF 433

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
           + A  +Y +M +  + PN+ T   ++L  C++  +   + LL  +I +   LD    I L
Sbjct: 434 DMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLD----IIL 489

Query: 574 TKFIFKFHSSSSAVNQLVEM 593
              +   ++ S  + + +E+
Sbjct: 490 YNIVIDGYAKSGCIEEALEL 509



 Score = 42.4 bits (98), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 43/213 (20%), Positives = 86/213 (40%), Gaps = 7/213 (3%)

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
           E+  +V++ LL    +    ++++ +   M D+       S+  +L      R+ D+  +
Sbjct: 140 ESTGLVWDMLLFLSSRLRMVDESLYILKKMKDRNLNVSTQSYNSVLYNF---RETDKMWD 196

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           VY+ I       N H ++ +VD L    +   A+   R +  +     VVS+   +    
Sbjct: 197 VYKEI----KDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYC 252

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
           + G  + A   +  +    + P+ Y++ +++   C   +I     L  D+    +E D  
Sbjct: 253 KLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSV 312

Query: 569 TSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
           T   L K        S A   + +M + GL PD
Sbjct: 313 TYNILVKGFHLLGMISGAGEVIQDMLDKGLSPD 345


>gi|302754000|ref|XP_002960424.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
 gi|300171363|gb|EFJ37963.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
          Length = 321

 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 146/311 (46%), Gaps = 38/311 (12%)

Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
           +P  ++F I +  LCK N +++  +++ +M  +G +PN  +F  +++  CK GR AEAY 
Sbjct: 7   IPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGRSAEAY- 65

Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
                                            GY+ E M   G SP +VTY  LI GF 
Sbjct: 66  ---------------------------------GYI-ETMRSMGVSPTIVTYNILIDGFC 91

Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
           + +    A   L  +   GH P+ V +N  +  L K G  DDAL ++  + E K+  D Y
Sbjct: 92  KEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKVDDALALFRAMTEKKIRLDVY 151

Query: 362 TFCSLLSTVCLSGRFSLLPKLVCGLEVEADLV---VYNALLSYFCKAGFPNQAVKLYNTM 418
            + +L+  +C +G+ +    L+  +E    +     YNA+LS+ CK    N+A KL+  M
Sbjct: 152 GYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAHKLFKRM 211

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
              G  PD  +F  ++ G C   +ID+A+ + Q +     A    ++  ++D L  AGR 
Sbjct: 212 TGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYNTLIDALNRAGRV 271

Query: 479 HKAIQLFRRAI 489
            +A +L +  I
Sbjct: 272 SEAYRLLQEMI 282



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 131/283 (46%), Gaps = 5/283 (1%)

Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
           M + GC P VVT+  L+ G  +A   + AF  ++++   G  P+ +  N ++D L K G 
Sbjct: 1   MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGR 60

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVC----LSGRFSLLPKLVCGLEVEADLVVYN 396
             +A    + +  + + P   T+  L+   C    L     +L ++  G   E + V YN
Sbjct: 61  SAEAYGYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMT-GRGHEPNHVTYN 119

Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
             L   CK G  + A+ L+  M +K    D Y +  L+ GLC A K+ EA ++   +  +
Sbjct: 120 TFLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENS 179

Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
                   + AI+  L +  R ++A +LF+R        D +++ + + G   G R ++A
Sbjct: 180 GCVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDA 239

Query: 517 YILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
            +L  QMK   + P    Y  ++ +  +   +    RLLQ++I
Sbjct: 240 LLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMI 282



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/326 (21%), Positives = 127/326 (38%), Gaps = 36/326 (11%)

Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
           +A  GC+    TF + +    +        E  + M   G  PN    N +MD L K GR
Sbjct: 1   MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGR 60

Query: 170 VDLG---IKVLKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEI 225
                  I+ ++   + P  +++NI +   CK   +    +++  M  +G  PN   +  
Sbjct: 61  SAEAYGYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNT 120

Query: 226 LLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
            L+  CK G++ +A  L   M      L V  +T LIDG  +  +L  A  L ++M  +G
Sbjct: 121 FLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSG 180

Query: 286 CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL 345
           C P    Y +++    +    + A      +   G  PD +   +++    +    DDAL
Sbjct: 181 CVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDAL 240

Query: 346 DVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKA 405
            +   +    L P                                  V+YN L+    +A
Sbjct: 241 LLLQQMKSAGLAPRE--------------------------------VIYNTLIDALNRA 268

Query: 406 GFPNQAVKLYNTMLDKGFTPDNYSFV 431
           G  ++A +L   M+ +G +P++ ++ 
Sbjct: 269 GRVSEAYRLLQEMISRGLSPNSRTYA 294



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 112/259 (43%), Gaps = 9/259 (3%)

Query: 351 LLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEAD------LVVYNALLSYFCK 404
           + E   +P   TF  L+  +C + R +   +LV   EV A+       +V+N ++   CK
Sbjct: 1   MAEKGCIPTVVTFGILVDGLCKANRLTDAFELV---EVMAERGCFPNALVFNGIMDALCK 57

Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV 464
            G   +A     TM   G +P   ++  L+ G C   K+  A+ + Q +       N   
Sbjct: 58  EGRSAEAYGYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVT 117

Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
           +   +  L + G+   A+ LFR    +K  LDV  YT  I GL + G+  EAY L  +M+
Sbjct: 118 YNTFLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEME 177

Query: 525 HIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSS 584
           +    P    Y  +L   CK   I    +L + +  + I  D+ T   +     + H   
Sbjct: 178 NSGCVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRID 237

Query: 585 SAVNQLVEMCNLGLIPDEM 603
            A+  L +M + GL P E+
Sbjct: 238 DALLLLQQMKSAGLAPREV 256



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/305 (20%), Positives = 123/305 (40%), Gaps = 33/305 (10%)

Query: 60  CPSDLIALSF-FIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIK 118
           C ++ +  +F  +    +R  F +   F+ ++  + +  GR     G +  +  +G    
Sbjct: 21  CKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCK-EGRSAEAYGYIETMRSMGVSPT 79

Query: 119 AQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK 178
             T+ + +  + + E     LE   EM   G  PN    N  +  L K G+VD  + + +
Sbjct: 80  IVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKVDDALALFR 139

Query: 179 ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAE 238
                                           M  K    +V  +  L++  C+ G++AE
Sbjct: 140 -------------------------------AMTEKKIRLDVYGYTTLIDGLCQAGKLAE 168

Query: 239 AYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIK 298
           AY LL  M   G       +  ++    +  R++ A  L+++M  +G  P+ +T+  ++ 
Sbjct: 169 AYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVF 228

Query: 299 GFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP 358
           G+        A   L  ++S G AP  V +N LID L++ G   +A  +   ++   L P
Sbjct: 229 GYCRGHRIDDALLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSP 288

Query: 359 DSYTF 363
           +S T+
Sbjct: 289 NSRTY 293


>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 735

 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 140/640 (21%), Positives = 259/640 (40%), Gaps = 87/640 (13%)

Query: 47  ILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGI 106
           IL P  V + L      L ALS F    K+  + H   ++  MI  +    G F+ +  +
Sbjct: 4   ILLPKHVAAVLKYQKDPLKALSIFNSVKKEDGFKHTFLTYKRMIEKLG-FHGEFDAMERV 62

Query: 107 VGELA-RVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
           + E+   V   +    ++  +R Y R       ++ F+ M  +   P+ F+ N +M++L 
Sbjct: 63  LMEMRLNVDNSLLEGVYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILV 122

Query: 166 KIGRVDLGIKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
           + G  +   KV      E   P+  +F I + + C+         ++  M  +G   N  
Sbjct: 123 EYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAV 182

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
           ++  +++ F +     EAY+L   M+ LG    +  +  L+    +   L     L  K+
Sbjct: 183 VYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKV 242

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFS-------FLDMLESEGHAPDLVFHNVLIDC 334
           ++NG  PN+ T+   I+G     +   A S       +L  + ++G  PD   +N +I  
Sbjct: 243 LKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYG 302

Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS-------------LLPK 381
            SK+G   DA  +         VPD +T+CSL+  VC  G                L P 
Sbjct: 303 YSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPS 362

Query: 382 LVC-----------GLEVEA--------------DLVVYNALLSYFCKAGFPNQAVKLYN 416
           +V            GL ++A              D+  YN +++  CK G  + A  L N
Sbjct: 363 IVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLN 422

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
             + KG+ PD ++F  L+ G C   K+D AI +   +  +    +   + +I++ L +A 
Sbjct: 423 AAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAA 482

Query: 477 RCHKAIQLFR------------------------RAIVEKYPL-----------DVVSYT 501
           +    ++ F+                        R + E   L           D VS+ 
Sbjct: 483 KPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFG 542

Query: 502 VAIRGLLEGGRTEEAYILYSQM-KHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
             I G    G  +EAY L+ +M +   +     TY +M+ +F ++ ++ M ++L  ++ D
Sbjct: 543 TVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGD 602

Query: 561 ARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
              + D +T   +     K  + +S  + L++   +G +P
Sbjct: 603 KGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVP 642



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 134/568 (23%), Positives = 230/568 (40%), Gaps = 82/568 (14%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV +F   I    R       +R ++  +   GC + A  +   +  ++         E 
Sbjct: 145 DVCTFTIRIKSFCRTKRPLAALR-LLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYEL 203

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIK----VLKETQLPNFLSFNIALCNLCK 197
           F++M R G  P+    N +M +L K G +  G K    VLK    PN  +FNI +  LC+
Sbjct: 204 FNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCR 263

Query: 198 L-------NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL------- 243
                   + V   ++ +  MV KG  P+   +  ++  + K+G+I +A ++L       
Sbjct: 264 KGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKG 323

Query: 244 ---------GLMI-----------------TLGTSL--SVNAWTVLIDGFRRLRRLDMAG 275
                     L+I                  LG  L  S+  +  LI G  +   +  A 
Sbjct: 324 FVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKAL 383

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
            L   M + G SP++ TY  +I G  +    S A + L+   ++G+ PD+   N LID  
Sbjct: 384 QLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGY 443

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVY 395
            K    D+A+ + D +    + PD  T                                Y
Sbjct: 444 CKRLKMDNAIGILDSMWSHGVTPDVIT--------------------------------Y 471

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
           N++L+  CKA  P   ++ +  +++KG  P+  ++  L+  LC ARK+ EA+++ + I  
Sbjct: 472 NSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRN 531

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL--DVVSYTVAIRGLLEGGRT 513
                +      ++      G   +A QLFRR + ++Y +   V +Y + I    E    
Sbjct: 532 RGLIPDPVSFGTVISGFCNNGDLDEAYQLFRR-MEQQYRICHTVATYNIMINAFSEKLDM 590

Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
           + A  L+ +M      P++YTYRVM+  FCK  N+      L   I+        T  R+
Sbjct: 591 DMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRV 650

Query: 574 TKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
              +   H    AV  +  M   G++P+
Sbjct: 651 INCLCVQHRVHEAVGIVHLMVRTGVVPE 678



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 109/526 (20%), Positives = 224/526 (42%), Gaps = 82/526 (15%)

Query: 2   LWRCKRSLFYTAQRTQILKTIISFKSIHQIS--------SPKVCATTH--QDFPIILAPH 51
            + C+ S+F       IL     F   H++         +P VC  T   + F     P 
Sbjct: 104 FYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPL 163

Query: 52  IVHSTLLNCPSDLIALSFFIWCA-----KQRDY----------------FHDVQSFDHMI 90
                L N PS    L+  ++C       + +Y                F  + +F+ ++
Sbjct: 164 AALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLM 223

Query: 91  SVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLR-IYWRGEMYGM---VLEA---FD 143
            ++ +  G  +    ++ ++ + G      TF +F++ +  +G + G    V+EA     
Sbjct: 224 HILCK-KGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLH 282

Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNL----CKLN 199
           +M   G  P+ F  N ++    K+G++    ++LK+ +   F+      C+L    C+  
Sbjct: 283 KMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDG 342

Query: 200 DVSNV----KDVIGM-------------------------------MVRKGFYPNVRMFE 224
           D+ +     ++ +G                                M ++G  P++  + 
Sbjct: 343 DIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYN 402

Query: 225 ILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN 284
           +++N  CKMG +++A  LL   I  G    +  +  LIDG+ +  ++D A  + + M  +
Sbjct: 403 LVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSH 462

Query: 285 GCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
           G +P+V+TY S++ G  +A           M+  +G  P+++ +N+LI+ L K     +A
Sbjct: 463 GVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEA 522

Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSG----RFSLLPKLVCGLEVEADLVVYNALLS 400
           LD+ + +    L+PD  +F +++S  C +G     + L  ++     +   +  YN +++
Sbjct: 523 LDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMIN 582

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
            F +    + A KL++ M DKG  PD+Y++  ++ G C    ++  
Sbjct: 583 AFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSG 628



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 81/348 (23%), Positives = 142/348 (40%), Gaps = 70/348 (20%)

Query: 309 AFSFLDMLESE-GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
           A S  + ++ E G     + +  +I+ L   G +D    V   L+E++L  D+    SLL
Sbjct: 23  ALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERV---LMEMRLNVDN----SLL 75

Query: 368 STVCLS-----GRFSLLPKLVCGLE------VEADLVVYNALLSYFCKAGFPNQAVKLYN 416
             V +S     GR   + + V   E       E  +  YNA+++   + G+ NQA K+Y 
Sbjct: 76  EGVYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYL 135

Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
            M  +G  PD  +F   ++  C  +                                   
Sbjct: 136 RMKHEGIAPDVCTFTIRIKSFCRTK----------------------------------- 160

Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
           R   A++L      +   L+ V Y   I G  E     EAY L+++M  + + P+  T+ 
Sbjct: 161 RPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFN 220

Query: 537 VMLLSFCKERNIKMVKRLLQDVIDARIELDYHT-SIRLTKFIFK--FHSSSSAV----NQ 589
            ++   CK+ +++  ++LL  V+   +  +  T +I +     K     ++S V    N 
Sbjct: 221 KLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENY 280

Query: 590 LVEMCNLGLIPDEM--------WRKLGLLSDET-MTPVSLFDGFVPCE 628
           L +M N GL PD+         + K+G + D + +   + F GFVP E
Sbjct: 281 LHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDE 328


>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
           [Oryza sativa Japonica Group]
          Length = 571

 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 95/386 (24%), Positives = 178/386 (46%), Gaps = 10/386 (2%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNL 195
           +AF    R   +P+ +  N V+  L +IG++     V K+ +     P+  ++N  +   
Sbjct: 177 KAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGY 236

Query: 196 CKLNDVSNVKDV---IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
           CK     N+  V   +  MV  G  P    F +L+N +CK    A A ++   M   G +
Sbjct: 237 CKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIA 296

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
            SV  +  LI G     +++    L E+M   G SPN +T+  ++KGF +  M + A  +
Sbjct: 297 ASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDW 356

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
           +D +      PD+V +N+LID   ++G  +DA+ V + + +  + P+  T+  L++    
Sbjct: 357 IDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSR 416

Query: 373 SGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
           SG +     L+  ++   +EAD+V YN L+   C  G   +AVKL + M + G  P++ +
Sbjct: 417 SGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLT 476

Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
           +  +++G C    I  A  +   +       N   +   +    + G+  +A  L    +
Sbjct: 477 YNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEML 536

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEE 515
            +    + ++Y     G++E G T +
Sbjct: 537 DKCLVPNGITYETIKEGMMEKGYTPD 562



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 171/375 (45%), Gaps = 13/375 (3%)

Query: 74  AKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWR-- 131
           A +R    D+ +F+ +IS + R+ G+      +  ++   G      T+   +  Y +  
Sbjct: 182 ALRRRVSPDIYTFNTVISGLCRI-GQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKG 240

Query: 132 --GEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNF 185
             G MY + +    EM   G +P      ++++   K       ++V +E +      + 
Sbjct: 241 GAGNMYHVDM-LLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASV 299

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGL 245
           +++N  +  LC    V     ++  M   G  PN   F  +L  FCK G +A+A   +  
Sbjct: 300 VTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDG 359

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           M        V  + +LID +RRL +++ A  + E M + G SPNV TY  LI GF  +  
Sbjct: 360 MTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGD 419

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
           +  A   LD ++ +G   D+V +NVLI  L   G    A+ + D + E+ L P+  T+ +
Sbjct: 420 WRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNT 479

Query: 366 LLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
           ++   C  G      ++   +E     A++V YN  + YFC+ G  ++A  L N MLDK 
Sbjct: 480 IIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKC 539

Query: 423 FTPDNYSFVGLLRGL 437
             P+  ++  +  G+
Sbjct: 540 LVPNGITYETIKEGM 554



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 102/453 (22%), Positives = 188/453 (41%), Gaps = 54/453 (11%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+  S N  L  L     V   +      +R+   P++  F  +++  C++G++ +A  +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRR------LRRLDMAGYLWEKMVQNGCSPNVVTYTSL 296
              +   G + SV  +  LIDG+ +      +  +DM   L ++MV+ G SP  VT+  L
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDM---LLKEMVEAGISPTAVTFGVL 270

Query: 297 IKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
           I G+ +    + A    + ++ +G A  +V +N LI  L   G  ++ + + + + +L L
Sbjct: 271 INGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGL 330

Query: 357 VPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVK 413
            P+  TF  +L   C  G  +     + G+    VE D+V+YN L+  + + G    A+ 
Sbjct: 331 SPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMA 390

Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
           +   M  KG +P+  ++  L+ G   +     A                   + ++D + 
Sbjct: 391 VKEAMAKKGISPNVTTYNCLITGFSRSGDWRSA-------------------SGLLDEMK 431

Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
           E G                   DVV+Y V I  L   G   +A  L  +M  + + PN  
Sbjct: 432 EKG----------------IEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHL 475

Query: 534 TYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEM 593
           TY  ++  FC + NIK    +   +   R   +  T     K+  +      A + L EM
Sbjct: 476 TYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEM 535

Query: 594 CNLGLIPDEMWRKLGLLSDETMTPVSLFDGFVP 626
            +  L+P+        ++ ET+    +  G+ P
Sbjct: 536 LDKCLVPNG-------ITYETIKEGMMEKGYTP 561



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 67/324 (20%), Positives = 120/324 (37%), Gaps = 41/324 (12%)

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL-- 378
           H P     N L+  L      D A   +   L  ++ PD YTF +++S +C  G+     
Sbjct: 152 HRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAG 211

Query: 379 -LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVK---LYNTMLDKGFTPDNYSFVGLL 434
            + K +    +   +  YN+L+  +CK G          L   M++ G +P   +F  L+
Sbjct: 212 DVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLI 271

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR------- 487
            G C       A+ V++ +     A +   + +++  L   G+  + ++L          
Sbjct: 272 NGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLS 331

Query: 488 ---------------------------AIVEK-YPLDVVSYTVAIRGLLEGGRTEEAYIL 519
                                       + E+    DVV Y + I      G+ E+A  +
Sbjct: 332 PNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAV 391

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK 579
              M    + PN  TY  ++  F +  + +    LL ++ +  IE D  T   L   +  
Sbjct: 392 KEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCC 451

Query: 580 FHSSSSAVNQLVEMCNLGLIPDEM 603
                 AV  L EM  +GL P+ +
Sbjct: 452 KGEVRKAVKLLDEMSEVGLEPNHL 475


>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 101/384 (26%), Positives = 176/384 (45%), Gaps = 9/384 (2%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P FL FN  L +L K      V  +       G  P++    IL+NCFC    I  A+ +
Sbjct: 57  PTFL-FNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 115

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
              ++  G          LI G      +    Y  +++V  G   + V+Y +LI G  +
Sbjct: 116 FANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCK 175

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
           A         L  LE     PD+V +N +I+ L K     DA DVY  ++   + PD  T
Sbjct: 176 AGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVT 235

Query: 363 FCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAG---FPNQAVKLY 415
           + +L+   C+ G+    FSLL ++     +  D+  ++ L+    K G     ++A+ L+
Sbjct: 236 YTTLIHGFCIMGKMKEAFSLLNEMKLK-NINPDVYTFSVLIDALGKEGKKKMVDEAMSLF 294

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
             M  K   PD  ++  L+ GLC    ++ AI + + +  +    + + +T ++D L + 
Sbjct: 295 EEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKG 354

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
           GR   A + F+  +V+   L+V  Y V I GL + G   EA  L S+M+     PNA T+
Sbjct: 355 GRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAITF 414

Query: 536 RVMLLSFCKERNIKMVKRLLQDVI 559
           R ++ +  ++      +++L+++I
Sbjct: 415 RTIICALSEKDENDKAEKILREMI 438



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/314 (22%), Positives = 130/314 (41%), Gaps = 43/314 (13%)

Query: 288 PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
           P    + +++   ++ K +    S     E  G  PDL   ++LI+C         A  V
Sbjct: 56  PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 115

Query: 348 YDGLLELKLVPDSYTFCSLLSTVCLSGRFS------------------------------ 377
           +  +L+    PD+ T  +L+  +C  G                                 
Sbjct: 116 FANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCK 175

Query: 378 ---------LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
                    LL KL  G  V+ D+V+YN +++  CK      A  +Y+ M+ KG +PD  
Sbjct: 176 AGETKAVARLLRKLE-GHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVV 234

Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR---CHKAIQLF 485
           ++  L+ G C   K+ EA ++   + + N   + +  + ++D L + G+     +A+ LF
Sbjct: 235 TYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLF 294

Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
                +    D+V+Y   I GL +    E A  L  +MK   + P+ Y+Y ++L   CK 
Sbjct: 295 EEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKG 354

Query: 546 RNIKMVKRLLQDVI 559
             +++ K   Q ++
Sbjct: 355 GRLEIAKEFFQHLL 368



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/302 (22%), Positives = 129/302 (42%), Gaps = 41/302 (13%)

Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNA 397
           +  A+  ++ +L ++  P ++ F ++LS++  + R+  +  L    E   +  DL   + 
Sbjct: 39  HHHAVASFNLMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSI 98

Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
           L++ FC       A  ++  +L +GF PD  +   L++GLC   +I + +  +  +V   
Sbjct: 99  LINCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQG 158

Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLFRR------------------------------ 487
             ++   +  +++ L +AG      +L R+                              
Sbjct: 159 FQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDAC 218

Query: 488 -----AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
                 IV+    DVV+YT  I G    G+ +EA+ L ++MK   + P+ YT+ V++ + 
Sbjct: 219 DVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDAL 278

Query: 543 CKERNIKMVKR---LLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLI 599
            KE   KMV     L +++    +  D  T   L   + K H    A+  L EM   G+ 
Sbjct: 279 GKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQ 338

Query: 600 PD 601
           PD
Sbjct: 339 PD 340



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 80/197 (40%), Gaps = 7/197 (3%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA---FDEMGRFGFTP 152
           + G+ +    ++ E+          TF + +    +     MV EA   F+EM      P
Sbjct: 245 IMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIP 304

Query: 153 NTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVI 208
           +    N ++D L K   ++  I +LKE +     P+  S+ I L  LCK   +   K+  
Sbjct: 305 DIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFF 364

Query: 209 GMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRL 268
             ++ KG + NV  + +++N  CK G   EA  L   M   G   +   +  +I      
Sbjct: 365 QHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAITFRTIICALSEK 424

Query: 269 RRLDMAGYLWEKMVQNG 285
              D A  +  +M+  G
Sbjct: 425 DENDKAEKILREMIARG 441


>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
 gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 874

 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 119/538 (22%), Positives = 235/538 (43%), Gaps = 36/538 (6%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           R E V  +  ++   G   +  TF L +R            E FDEM   G  PN F   
Sbjct: 127 RVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFG 186

Query: 159 IVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
           I++    K G  D G+++L   +    LPN + +N  + + C+     + + ++  M  +
Sbjct: 187 ILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREE 246

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM-----ITLGTSLSVNAWTVLIDGFRRLR 269
           G  P++  F   ++  CK G++ +A ++   M     + L    S+  + +++ GF ++ 
Sbjct: 247 GLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSI-TYNLMLKGFCKVG 305

Query: 270 RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHN 329
            L+ A  L+E + +N    ++ +Y   ++G +    F  A + L  +  +G  P +  +N
Sbjct: 306 LLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYN 365

Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL--- 386
           +L+D L K+G   DA  +   +    + PD+ T+  LL   C  G+      L+  +   
Sbjct: 366 ILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRN 425

Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
               +    N LL    K G  ++A +L   M +KG+  D  +   ++ GLCG+ ++D+A
Sbjct: 426 NCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKA 485

Query: 447 INVYQGIVMNNPAV-----NAHV------------------HTAIVDRLIEAGRCHKAIQ 483
           I + +G+ ++  A      N+++                  ++ +++ L +AGR  +A  
Sbjct: 486 IEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKN 545

Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
           LF   + EK   D V+Y + I    + G+   A+ +   M+      +  TY  ++L   
Sbjct: 546 LFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLG 605

Query: 544 KERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            +  I  +  L+ ++ +  I  +  T     +++ +      A N L EM    + P+
Sbjct: 606 IKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPN 663



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 103/438 (23%), Positives = 193/438 (44%), Gaps = 65/438 (14%)

Query: 152 PNTFARNIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDV 207
           PN+   N+++    K+G ++    L   + +   L +  S+NI L  L +       + V
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
           +  M  KG  P++  + IL++  CK+G +++A  ++GLM   G       +  L+ G+  
Sbjct: 349 LKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCS 408

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
           + ++D A  L ++M++N C PN  T   L+    +    S A   L  +  +G+  D V 
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVT 468

Query: 328 HNVLIDCLSKMGSYDDALD-----------------------VYDGLLELKLVPDSYTFC 364
            N+++D L   G  D A++                       V D L+E   +PD  T+ 
Sbjct: 469 CNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYS 528

Query: 365 SLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
           +LL+ +C +GRF+    L   + G +++ D V YN  + +FCK G  + A ++   M  K
Sbjct: 529 TLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKK 588

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
           G      ++  L+ GL    +I E                  +H  ++D + E G     
Sbjct: 589 GCHKSLETYNSLILGLGIKNQIFE------------------IH-GLMDEMKEKG----- 624

Query: 482 IQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
                         ++ +Y  AI+ L EG + E+A  L  +M    + PN ++++ ++ +
Sbjct: 625 -----------ISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEA 673

Query: 542 FCKERNIKMVKRLLQDVI 559
           FCK  +  M + + +  +
Sbjct: 674 FCKVPDFDMAQEVFETAV 691



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 126/544 (23%), Positives = 212/544 (38%), Gaps = 117/544 (21%)

Query: 151 TPNTFARNIVMDVLFKIGRVDLGIKVLKETQ-LPNF-LSFNIALCNLCKLNDV------S 202
           +P+  +  I +D    I R+ +  K+ +E Q L N  LS +I    L  L  V      S
Sbjct: 29  SPSEESHGISLDATPTIARILVRAKMHEEIQELHNLILSSSIQKTKLSSLLSVVSIFAKS 88

Query: 203 NVKDVIG---MMVRKGF---YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
           N  D       +VR  F    P+V ++ +LL    K  R+     L   M+  G +    
Sbjct: 89  NHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTY 148

Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
            + +LI        +D A  L+++M + GC PN  T+  L++G+ +A +       L+ +
Sbjct: 149 TFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAM 208

Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
           ES G  P+ V +N ++    + G  DD+  + + + E  LVPD  TF S +S +C  G+ 
Sbjct: 209 ESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKV 268

Query: 377 SLLPKLVCGLEVEADL-------VVYNALLSYFCKAGFPNQAVKLYNT------------ 417
               ++   +E++  L       + YN +L  FCK G    A  L+ +            
Sbjct: 269 LDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQS 328

Query: 418 -----------------------MLDKGFTPDNYSF-------------------VGLLR 435
                                  M DKG  P  YS+                   VGL++
Sbjct: 329 YNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMK 388

Query: 436 ----------------GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
                           G C   K+D A ++ Q ++ NN   NA+    ++  L + GR  
Sbjct: 389 RNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRIS 448

Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK-HIAVP--------- 529
           +A +L R+   + Y LD V+  + + GL   G  ++A  +   M+ H +           
Sbjct: 449 EAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYI 508

Query: 530 -------------PNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKF 576
                        P+  TY  +L   CK       K L  +++  +++ D   S+    F
Sbjct: 509 GLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPD---SVAYNIF 565

Query: 577 IFKF 580
           I  F
Sbjct: 566 IHHF 569



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 89/391 (22%), Positives = 178/391 (45%), Gaps = 20/391 (5%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G+ +  + ++ E+ R  C+  A T  + L   W+        E   +M   G+  +T   
Sbjct: 410 GKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTC 469

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFY 217
           NI++D L   G +D  I+++K  ++      + AL NL      S +  V   ++     
Sbjct: 470 NIIVDGLCGSGELDKAIEIVKGMRVHG----SAALGNLGN----SYIGLVDDSLIENNCL 521

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
           P++  +  LLN  CK GR AEA  L   M+         A+ + I  F +  ++  A  +
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRV 581

Query: 278 WEKMVQNGCSPNVVTYTSLIKGF-MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
            + M + GC  ++ TY SLI G  ++ ++F I    +D ++ +G +P++  +N  I  L 
Sbjct: 582 LKDMEKKGCHKSLETYNSLILGLGIKNQIFEI-HGLMDEMKEKGISPNICTYNTAIQYLC 640

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL------VCGLEVEA 390
           +    +DA ++ D +++  + P+ ++F  L+   C    F +  ++      +CG +   
Sbjct: 641 EGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGL 700

Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
             +++N LL+    AG   +A +L   +LD+GF    + +  L+  LC   +++ A  + 
Sbjct: 701 YSLMFNELLA----AGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGIL 756

Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
             ++      +      ++D L + G   +A
Sbjct: 757 HKMIDRGYGFDPAALMPVIDGLGKMGNKKEA 787



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 78/351 (22%), Positives = 162/351 (46%), Gaps = 7/351 (1%)

Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
           SV  + +L++   + RR++   +L++ MV  G +P   T+  LI+   ++     A    
Sbjct: 111 SVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELF 170

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           D +  +G  P+     +L+    K G  D  L++ + +    ++P+   + +++S+ C  
Sbjct: 171 DEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCRE 230

Query: 374 GRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTM-LDKGF---TPD 426
           GR     K+V  +  E    D+V +N+ +S  CK G    A ++++ M LD+      P+
Sbjct: 231 GRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPN 290

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
           + ++  +L+G C    +++A  +++ I  N+   +   +   +  L+  G+  +A  + +
Sbjct: 291 SITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLK 350

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
           +   +     + SY + + GL + G   +A  +   MK   V P+A TY  +L  +C   
Sbjct: 351 QMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVG 410

Query: 547 NIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLG 597
            +   K LLQ+++      + +T   L   ++K    S A   L +M   G
Sbjct: 411 KVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKG 461



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/177 (22%), Positives = 78/177 (44%), Gaps = 1/177 (0%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           PN  ++N A+  LC+   V +  +++  M++K   PNV  F+ L+  FCK+     A ++
Sbjct: 627 PNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEV 686

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
               +++        ++++ +      +L  A  L E ++  G       Y  L++   +
Sbjct: 687 FETAVSI-CGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCK 745

Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
                +A   L  +   G+  D      +ID L KMG+  +A    D ++E+  V +
Sbjct: 746 KDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMMEMASVGE 802



 Score = 47.0 bits (110), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 49/232 (21%), Positives = 96/232 (41%), Gaps = 23/232 (9%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTF-LLFLRIYWRG---EMYGMVLEAFDEMGRFGFTPN 153
           G+  +   ++ ++ + GC    +T+  L L +  +    E++G++    DEM   G +PN
Sbjct: 573 GKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLM----DEMKEKGISPN 628

Query: 154 TFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIG 209
               N  +  L +  +V+    +L E       PN  SF   +   CK+ D    ++V  
Sbjct: 629 ICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFE 688

Query: 210 MMV-----RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
             V     ++G Y       ++ N     G++ +A +LL  ++  G  L    +  L++ 
Sbjct: 689 TAVSICGQKEGLYS------LMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVES 742

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
             +   L++A  +  KM+  G   +      +I G  +      A SF D +
Sbjct: 743 LCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKM 794


>gi|297823811|ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325627|gb|EFH56047.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 867

 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 109/481 (22%), Positives = 215/481 (44%), Gaps = 12/481 (2%)

Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFL 186
           R  +     E +++M   G   +     ++M    +  + +  +K+ +        P+ L
Sbjct: 216 RSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAMKIFRRVMSRGAEPDGL 275

Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYP-NVRMFEILLNCFCKMGRIAEAYQLLGL 245
            F++A+   CK+ D+    D++  M  KG  P +   +  ++    K G + EA ++   
Sbjct: 276 LFSLAVQAACKMKDLVMALDLLREMREKGGVPASQETYTSVIVACVKEGNMEEAVKVKDE 335

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           M+  G  +SV A T LI GF     L  A   + +M + G +P+ V ++ +I+ F +   
Sbjct: 336 MVGFGIPMSVIAATSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNME 395

Query: 306 FSIAFSFLDMLESEGHAPDLVF-HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFC 364
              A      ++S G AP  V  H ++  CL K  S + AL++++   E   +   +   
Sbjct: 396 MEKAVEIYKRMKSVGIAPSSVLVHKMIQGCL-KAESPEAALEIFNDSFE-TWIAHGFMCN 453

Query: 365 SLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDK 421
            +   +C  G+       +  +E   +E ++V YN ++   C+    + A  +++ ML+K
Sbjct: 454 KIFLLLCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEK 513

Query: 422 GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
           G  P+N+++  L+ G    +    A  V   ++ +N   N  ++  I++ L + G+  KA
Sbjct: 514 GLQPNNFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKA 573

Query: 482 IQLFRRAIVEK-YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
            ++ +  I EK Y +   SY   I G  + G T+ A   Y +M    + PN  T+  ++ 
Sbjct: 574 KEMLQNLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLIN 633

Query: 541 SFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
            FCK   + +   ++ ++    ++LD      L     K +   +A     E+  LGL+P
Sbjct: 634 GFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMP 693

Query: 601 D 601
           +
Sbjct: 694 N 694



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/430 (22%), Positives = 194/430 (45%), Gaps = 7/430 (1%)

Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK---ETQLPNFLSFNIALCN 194
            +E +  M   G  P++   + ++    K    +  +++     ET + +    N     
Sbjct: 399 AVEIYKRMKSVGIAPSSVLVHKMIQGCLKAESPEAALEIFNDSFETWIAHGFMCNKIFLL 458

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           LCK   V      + MM  KG  PNV  +  ++   C+M  +  A  +   M+  G   +
Sbjct: 459 LCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPN 518

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL- 313
              +++LIDGF + +    A  +  +M+ +    N V Y ++I G  +    S A   L 
Sbjct: 519 NFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQ 578

Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           ++++ + ++     +N +ID   K G  D A++ Y  + E  + P+  TF SL++  C S
Sbjct: 579 NLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKS 638

Query: 374 GRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
            R  L  +++  +   +++ D+  Y AL+  FCK      A  L++ +L+ G  P+   +
Sbjct: 639 NRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVY 698

Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
             L+ G     K+D AI++Y+ +V +  + +   +T ++D L++ G    A  L+   + 
Sbjct: 699 NNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELLA 758

Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
                D + Y V + GL + G+   A  +  +MK     PN   Y  ++    +E N+  
Sbjct: 759 LGIVPDEILYVVLVNGLSKKGQFVRASKMLEEMKKKDATPNVLIYSTVIAGHHREGNLNE 818

Query: 551 VKRLLQDVID 560
             R+  ++++
Sbjct: 819 AFRVHDEMLE 828



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 91/373 (24%), Positives = 170/373 (45%), Gaps = 8/373 (2%)

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLG----IKVLKETQLPNFLSFNIALCNLCKLND 200
           M   G  PN    N +M    ++  +DL      ++L++   PN  +++I +    K  D
Sbjct: 475 MENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQD 534

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT-SLSVNAWT 259
             N  +VI  M+   F  N  ++  ++N  CK+G+ ++A ++L  +I     S+   ++ 
Sbjct: 535 EQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGCTSYN 594

Query: 260 VLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESE 319
            +IDGF +    D A   + +M +NG SPNVVT+TSLI GF ++    +A   +  ++S+
Sbjct: 595 SIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSK 654

Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL- 378
               D+  +  LID   K      A  ++  LLEL L+P+   + +L+S     G+    
Sbjct: 655 DLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAA 714

Query: 379 --LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
             L K +    +  DL  Y  ++    K G    A  LY+ +L  G  PD   +V L+ G
Sbjct: 715 IDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVPDEILYVVLVNG 774

Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
           L    +   A  + + +   +   N  +++ ++      G  ++A ++    + +    D
Sbjct: 775 LSKKGQFVRASKMLEEMKKKDATPNVLIYSTVIAGHHREGNLNEAFRVHDEMLEKGLVHD 834

Query: 497 VVSYTVAIRGLLE 509
              + + + G +E
Sbjct: 835 DTIFNLLVSGRVE 847



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 92/379 (24%), Positives = 175/379 (46%), Gaps = 9/379 (2%)

Query: 66  ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
           A + F+   + +    +V  +++M+    R+    +  R I  E+   G      T+ + 
Sbjct: 467 AATSFLRMMENKGIEPNVVFYNNMMLAHCRMKN-MDLARSIFSEMLEKGLQPNNFTYSIL 525

Query: 126 LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQ 181
           +  +++ +      E  ++M    F  N    N +++ L K+G+     ++L    KE +
Sbjct: 526 IDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKR 585

Query: 182 LP-NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAY 240
                 S+N  +    K  D  +  +    M   G  PNV  F  L+N FCK  R+  A 
Sbjct: 586 YSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLAL 645

Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
           +++  M +    L V A+  LIDGF +   +  A  L+ ++++ G  PNV  Y +LI GF
Sbjct: 646 EMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGF 705

Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
                   A      + ++G + DL  +  +ID L K G+   A D+Y  LL L +VPD 
Sbjct: 706 RNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVPDE 765

Query: 361 YTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
             +  L++ +   G+F    K++  +   +   ++++Y+ +++   + G  N+A ++++ 
Sbjct: 766 ILYVVLVNGLSKKGQFVRASKMLEEMKKKDATPNVLIYSTVIAGHHREGNLNEAFRVHDE 825

Query: 418 MLDKGFTPDNYSFVGLLRG 436
           ML+KG   D+  F  L+ G
Sbjct: 826 MLEKGLVHDDTIFNLLVSG 844



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 108/488 (22%), Positives = 217/488 (44%), Gaps = 34/488 (6%)

Query: 137 MVLEAFDEMGRFGFTP---NTFARNIVMDVLFKIGRVDLGIKVLKET---QLP-NFLSFN 189
           M L+   EM   G  P    T+   IV  V  K G ++  +KV  E     +P + ++  
Sbjct: 292 MALDLLREMREKGGVPASQETYTSVIVACV--KEGNMEEAVKVKDEMVGFGIPMSVIAAT 349

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
             +   C  N++    D    M  +G  P+  MF +++  FCK   + +A ++   M ++
Sbjct: 350 SLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSV 409

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF--- 306
           G + S      +I G  +    + A  ++    +          T +  GFM  K+F   
Sbjct: 410 GIAPSSVLVHKMIQGCLKAESPEAALEIFNDSFE----------TWIAHGFMCNKIFLLL 459

Query: 307 ------SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
                   A SFL M+E++G  P++VF+N ++    +M + D A  ++  +LE  L P++
Sbjct: 460 CKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNN 519

Query: 361 YTFCSLLSTVCLS----GRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVK-LY 415
           +T+  L+     +      + ++ +++     EA+ V+YN +++  CK G  ++A + L 
Sbjct: 520 FTYSILIDGFFKNQDEQNAWEVINQMIAS-NFEANEVIYNTIINGLCKVGQTSKAKEMLQ 578

Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
           N + +K ++    S+  ++ G       D A+  Y+ +  N  + N    T++++   ++
Sbjct: 579 NLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKS 638

Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
            R   A+++      +   LDV +Y   I G  +    + AY L+S++  + + PN   Y
Sbjct: 639 NRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVY 698

Query: 536 RVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCN 595
             ++  F     +     L + +++  I  D  T   +   + K  +   A +   E+  
Sbjct: 699 NNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELLA 758

Query: 596 LGLIPDEM 603
           LG++PDE+
Sbjct: 759 LGIVPDEI 766



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/395 (19%), Positives = 167/395 (42%), Gaps = 8/395 (2%)

Query: 204 VKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLID 263
           V +++    R  F  + R F  LLN + +  R+  A     LM+       V     ++ 
Sbjct: 153 VNNLVDSSKRFDFELSSRAFNYLLNAYIRNRRMDYAVDCFNLMVDRNVVPFVPYVNNVLS 212

Query: 264 GFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP 323
              R   +D A  ++ KMV  G + + VT   L++  +  +    A      + S G  P
Sbjct: 213 SLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAMKIFRRVMSRGAEP 272

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY-TFCSLLSTVCLSGRFSLLPKL 382
           D +  ++ +    KM     ALD+   + E   VP S  T+ S++      G      K+
Sbjct: 273 DGLLFSLAVQAACKMKDLVMALDLLREMREKGGVPASQETYTSVIVACVKEGNMEEAVKV 332

Query: 383 ---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
              + G  +   ++   +L++ FC      +A+  +N M ++G  PD   F  ++   C 
Sbjct: 333 KDEMVGFGIPMSVIAATSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCK 392

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
             ++++A+ +Y+ +     A ++ +   ++   ++A     A+++F  +  E +      
Sbjct: 393 NMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLKAESPEAALEIFNDSF-ETWIAHGFM 451

Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI 559
                  L + G+ + A      M++  + PN   Y  M+L+ C+ +N+ + + +  +++
Sbjct: 452 CNKIFLLLCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEML 511

Query: 560 DARIELDYHTSIRLTKFIFKFHSSSSA---VNQLV 591
           +  ++ +  T   L    FK     +A   +NQ++
Sbjct: 512 EKGLQPNNFTYSILIDGFFKNQDEQNAWEVINQMI 546


>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
          Length = 621

 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 113/500 (22%), Positives = 205/500 (41%), Gaps = 42/500 (8%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           L G     +  +  L   G    +  +  F+  Y R  M       F  M   G     F
Sbjct: 84  LAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAF 143

Query: 156 ARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
               ++  L   G V   + V      ++  P+   +   +  LC+       + ++   
Sbjct: 144 TYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEA 203

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
           +  GF PN+ ++  L++ +C  G +  A ++   M     S +V  +T LI G  +  ++
Sbjct: 204 MSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKV 263

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
           + A  L+ +MV+ G  PNVVTYT+LI+G         AF  L ++E+ G           
Sbjct: 264 ERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNG----------- 312

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EV 388
                                   LVP+ +TF  L+  +C   +       +  L    V
Sbjct: 313 ------------------------LVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGV 348

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
           + + VVY +L+   CK G  + A +L   M+ +GF PD +S+  L+ GLC  +K+ +A  
Sbjct: 349 KVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATL 408

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           + + ++      +   +T I+D L+         ++F + I      D+V+YTV +R   
Sbjct: 409 MLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYC 468

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
           E GR E+A  +  QM    V PN  TY  ++  +     +       + ++    + +  
Sbjct: 469 EEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNED 528

Query: 569 TSIRLTKFIFKFHSSSSAVN 588
           +   L + + K  SS ++V+
Sbjct: 529 SYTVLLRLVVKKSSSDNSVD 548



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 109/459 (23%), Positives = 202/459 (44%), Gaps = 16/459 (3%)

Query: 184 NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
           N  ++   +   C   D+   K  +  ++  G  P+   +   +  +C+ G +  A ++ 
Sbjct: 71  NLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF 130

Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
            LM   G   +   +T L+ G      +  A  ++  M  + C+P+   Y +++ G  EA
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEA 190

Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
                A   L+   S G  P++V +N LID     G  + AL V++G+   +  P+  T+
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTY 250

Query: 364 CSLLSTVCLSGRFS----LLPKLV-CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
             L+  +C SG+      L  ++V  GLE   ++V Y AL+   C  G    A +L + M
Sbjct: 251 TELIHGLCKSGKVERAMVLFSRMVEAGLE--PNVVTYTALIQGQCNEGHLQCAFRLLHLM 308

Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
              G  P++++F  L+  LC   K++EA      +V     VN  V+T+++D L + G+ 
Sbjct: 309 ETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKI 368

Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
             A +L ++ I E +  D  SY+  I GL    +  +A ++   M    +  +  TY ++
Sbjct: 369 DAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTII 428

Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGL 598
           +    +E   +  K++   +I   I  D  T     +   +      A + +V+M + G+
Sbjct: 429 IDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGV 488

Query: 599 IPD--------EMWRKLGLLSDETMT-PVSLFDGFVPCE 628
            P+          +  LGL+S    T  V +  G+ P E
Sbjct: 489 FPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNE 527



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 99/396 (25%), Positives = 174/396 (43%), Gaps = 16/396 (4%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNV 204
           GF PN    N ++D     G ++  +KV +        PN  ++   +  LCK   V   
Sbjct: 207 GFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERA 266

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWT--VLI 262
             +   MV  G  PNV  +  L+   C  G +  A++LL LM T G  L  N WT  VLI
Sbjct: 267 MVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNG--LVPNDWTFSVLI 324

Query: 263 DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
           D   +  +++ A      +V+ G   N V YTSLI G  +      A   +  + SEG  
Sbjct: 325 DALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFV 384

Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLE--LKLVPDSYTFC--SLLSTVCLSGRFSL 378
           PD   ++ LID L +      A  + + ++E  ++  P +YT     L+  V   G   +
Sbjct: 385 PDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKI 444

Query: 379 LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
             K++    +  D+V Y   +  +C+ G    A  +   M+D+G  P+  ++  L+RG  
Sbjct: 445 FDKMI-ATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYA 503

Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA---IVEKYPL 495
               + +A + ++ +V      N   +T ++  +++      ++ +++ A    +++   
Sbjct: 504 NLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQESNY 563

Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
           D + + + I GLL+ G   E   L S MK     P+
Sbjct: 564 DEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPS 599



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 79/327 (24%), Positives = 152/327 (46%), Gaps = 8/327 (2%)

Query: 132 GEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLS 187
           GEM    L+ F+ M     +PN      ++  L K G+V+  +    ++++    PN ++
Sbjct: 226 GEME-HALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVT 284

Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
           +   +   C    +     ++ +M   G  PN   F +L++  CK  ++ EA   LG ++
Sbjct: 285 YTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLV 344

Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
             G  ++   +T LIDG  +  ++D A  L +KM+  G  P+  +Y+SLI G    K  S
Sbjct: 345 KKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLS 404

Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
            A   L+ +  +G     V + ++ID L +    +    ++D ++   + PD  T+   +
Sbjct: 405 QATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFV 464

Query: 368 STVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
            + C  GR      ++  +    V  +LV YN L+  +   G  +QA   +  M+ KG+ 
Sbjct: 465 RSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWK 524

Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQ 451
           P+  S+  LLR +      D ++++++
Sbjct: 525 PNEDSYTVLLRLVVKKSSSDNSVDIWK 551



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 77/330 (23%), Positives = 139/330 (42%), Gaps = 38/330 (11%)

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
           F  ++ L S   A +L  +  LI+     G    A      LL   L PDSY + S +  
Sbjct: 57  FPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLG 116

Query: 370 VCLSGR-------FSLLPKLVC-----------------GLEVEA--------------D 391
            C +G        F L+P   C                 G+  EA              D
Sbjct: 117 YCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPD 176

Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
             VY  ++   C+AG   +A  L    +  GF P+   +  L+ G C A +++ A+ V++
Sbjct: 177 THVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFE 236

Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
           G+  N  + N   +T ++  L ++G+  +A+ LF R +      +VV+YT  I+G    G
Sbjct: 237 GMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEG 296

Query: 512 RTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSI 571
             + A+ L   M+   + PN +T+ V++ + CK   ++  +  L  ++   ++++     
Sbjct: 297 HLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYT 356

Query: 572 RLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
            L   + K     +A   + +M + G +PD
Sbjct: 357 SLIDGLCKTGKIDAADELMQKMISEGFVPD 386


>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
 gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
          Length = 454

 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 92/413 (22%), Positives = 183/413 (44%), Gaps = 3/413 (0%)

Query: 141 AFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLND 200
            + EM     +P+    N ++  L K   +D  ++VL    +PN  ++N  +   C    
Sbjct: 33  TYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEVLTVMVMPNCFTYNSIMHGYCSSGQ 92

Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
                 +   M   G  P+V  +  L++  CK G+  EA ++   M+  G    +  +  
Sbjct: 93  SEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGT 152

Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
           L+ G+     L     L   MVQNG   +   +  LI  + + +           +  +G
Sbjct: 153 LLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQG 212

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
             P+ V +  +ID L K+G  DDA+  ++ +++  L P+   + SL+  +C   ++    
Sbjct: 213 LTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAE 272

Query: 381 KLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
           +L+  +    +  ++V +N +L   CK G   ++ KL++ +   G  PD  ++  L+ G 
Sbjct: 273 ELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGY 332

Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
           C A K+D A+ +  G+V      ++  ++ +++   +  R   A+ LF+         D+
Sbjct: 333 CLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDI 392

Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
           ++Y + + GL    RT  A  LY+++          TY ++L+ F K  ++ M
Sbjct: 393 ITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNIILMDFAKTNSLMM 445



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 74/288 (25%), Positives = 147/288 (51%), Gaps = 10/288 (3%)

Query: 281 MVQNG-CSPNVVTYTSLIKG-FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
           M  +G C P+VV+Y ++I G F E  +     ++ +ML+    +PD V +N +I  LSK 
Sbjct: 1   MADDGRCPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRR-VSPDAVTYNSIIAALSKA 59

Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL---LPKLVCGLEVEADLVVY 395
            + D A++V    L + ++P+ +T+ S++   C SG+      + + +C   +E D+V Y
Sbjct: 60  QAMDRAMEV----LTVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTY 115

Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
           N+L+ Y CK G   +A K++++M+ +G  PD  ++  LL G      + E  ++   +V 
Sbjct: 116 NSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQ 175

Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
           N   ++ HV   ++    +  +  + + +F +   +    + V+Y   I GL + GR ++
Sbjct: 176 NGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDD 235

Query: 516 AYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
           A + + QM    + PN   Y  ++ + C     +  + L+ +++D  I
Sbjct: 236 AMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGI 283



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/387 (22%), Positives = 176/387 (45%), Gaps = 7/387 (1%)

Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
           P+V  +  +++   K G + +AY     M+    S     +  +I    + + +D A  +
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68

Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
              MV     PN  TY S++ G+  +     A      + S+G  PD+V +N L+D L K
Sbjct: 69  LTVMVM----PNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCK 124

Query: 338 MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVV 394
            G   +A  ++D +++  L PD  T+ +LL      G    +  L+  +    ++ D  V
Sbjct: 125 NGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHV 184

Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
           +N L+  + K    ++ V +++ M  +G TP+  ++  ++ GLC   ++D+A+  ++ ++
Sbjct: 185 FNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMI 244

Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
                 N  V+T+++  L    +  KA +L    + +    ++V +   +  L + GR  
Sbjct: 245 DKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVI 304

Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLT 574
           E+  L+  + HI V P+  TY  ++  +C    +    +LL  ++   ++ D  T   L 
Sbjct: 305 ESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLI 364

Query: 575 KFIFKFHSSSSAVNQLVEMCNLGLIPD 601
               K +    A+    EM + G+ PD
Sbjct: 365 NGYCKINRMEDALALFKEMESNGVNPD 391



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 127/260 (48%), Gaps = 4/260 (1%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           G    +  ++  + + G  +    F + +  Y + E    V+  F +M + G TPN    
Sbjct: 161 GALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNY 220

Query: 158 NIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
             V+D L K+GR+D  +    +++ +   PN + +   +  LC  +     +++I  ++ 
Sbjct: 221 RTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILD 280

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +G  PN+  F  +L+  CK GR+ E+ +L  L+  +G +  V  ++ LIDG+    ++D 
Sbjct: 281 QGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDG 340

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L   MV  G  P+ VTY++LI G+ +      A +    +ES G  PD++ +N+++ 
Sbjct: 341 AMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILH 400

Query: 334 CLSKMGSYDDALDVYDGLLE 353
            L +      A ++Y  + E
Sbjct: 401 GLFRTRRTAAAKELYARITE 420



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/397 (21%), Positives = 166/397 (41%), Gaps = 40/397 (10%)

Query: 152 PNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDV 207
           P+  + N ++D LFK G VD       ++L     P+ +++N  +  L K   +    +V
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68

Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
           + +MV     PN   +  +++ +C  G+  +A  +   M + G    V  +  L+D   +
Sbjct: 69  LTVMVM----PNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCK 124

Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
             +   A  +++ MV+ G  P++ TY +L+ G+            L ++   G   D   
Sbjct: 125 NGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHV 184

Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE 387
            N+LI   +K    D+ + V+  + +  L P++                           
Sbjct: 185 FNILICAYTKQEKVDEVVLVFSKMRQQGLTPNA--------------------------- 217

Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
                V Y  ++   CK G  + A+  +  M+DKG TP+   +  L+  LC   K ++A 
Sbjct: 218 -----VNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAE 272

Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
            +   I+      N      I+D L + GR  ++ +LF          DV++Y+  I G 
Sbjct: 273 ELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGY 332

Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
              G+ + A  L + M  + + P++ TY  ++  +CK
Sbjct: 333 CLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCK 369



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 16/183 (8%)

Query: 137 MVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-------PNFLSFN 189
           ++ E  D+    G  PN    N ++D L K GRV   I+  K   L       P+ ++++
Sbjct: 274 LIFEILDQ----GINPNIVFFNTILDSLCKEGRV---IESKKLFDLLGHIGVNPDVITYS 326

Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
             +   C    +     ++  MV  G  P+   +  L+N +CK+ R+ +A  L   M + 
Sbjct: 327 TLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESN 386

Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
           G +  +  + +++ G  R RR   A  L+ ++ ++G    + TY  ++  F  AK  S+ 
Sbjct: 387 GVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNIILMDF--AKTNSLM 444

Query: 310 FSF 312
             F
Sbjct: 445 MHF 447


>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Brachypodium distachyon]
          Length = 1102

 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 99/396 (25%), Positives = 182/396 (45%), Gaps = 4/396 (1%)

Query: 210 MMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLR 269
           MM   G   N   +  L+    K G   EA ++  +M T G   SV  ++VL+  F + R
Sbjct: 172 MMKEAGIVLNSYTYNGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAFGK-R 230

Query: 270 RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHN 329
            ++   +L  +M  +G  PNV +YT  I+   +A  F  A+  L  +E EG  PD+V + 
Sbjct: 231 DVETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNT 290

Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE 389
           VLI  L   G   DA DV+  +      PD  T+ +LL     +G    + ++   ++ +
Sbjct: 291 VLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKAD 350

Query: 390 A---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
               ++V Y A++   C+ G  ++A  +++ M  KG  P  YS+  L+ G   A +++ A
Sbjct: 351 GYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHA 410

Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
           + ++  + ++ P  N + +   ++   ++G   KAI+ +     +    DVV+    +  
Sbjct: 411 LELFNHMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYS 470

Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
           L + GR   A  ++ ++K I V P+  TY +M+    K  N     ++  ++I+ R   D
Sbjct: 471 LAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPD 530

Query: 567 YHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
                 L   ++K    + A     E+  + L P +
Sbjct: 531 VLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTD 566



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 111/456 (24%), Positives = 215/456 (47%), Gaps = 18/456 (3%)

Query: 101 ETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIV 160
           ETV  ++ E+   G      ++ + +R+  +   +    +   +M   G  P+     ++
Sbjct: 233 ETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVL 292

Query: 161 MDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLN-DVSNVKDVIGMMVRKG 215
           + +L   GRV    D+  K+    Q P+ +++ I L + C  N D  +V ++   M   G
Sbjct: 293 IQILCDAGRVSDAKDVFWKMKASDQKPDRVTY-ITLLDKCGDNGDSRSVIEIWNAMKADG 351

Query: 216 FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAG 275
           +  NV  +  +++  C++GR+ EA  +   M   G      ++  LI GF +  RL+ A 
Sbjct: 352 YNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHAL 411

Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
            L+  M  +G +PN  TY   I  + ++     A    ++++S+G  PD+V  N ++  L
Sbjct: 412 ELFNHMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSL 471

Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTF------CSLLSTVCLSGR-FSLLPKLVCGLEV 388
           +K G    A  V+  L  + + PD+ T+      CS  S    + + FS + +  C    
Sbjct: 472 AKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRC---- 527

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
             D++  N+L+    KAG  N+A K+++ + +    P + ++  LL GL    K+ E ++
Sbjct: 528 VPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMH 587

Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
           + + +  N+   N   +  ++D L + G  + A+ +     ++    D+ SY  A+ GL+
Sbjct: 588 LLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLV 647

Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
           +  R  EA+ ++ QMK + + P+  T   +L SF K
Sbjct: 648 KEDRLTEAFRIFCQMKKV-LAPDYTTLCTILPSFVK 682



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 127/561 (22%), Positives = 244/561 (43%), Gaps = 11/561 (1%)

Query: 49  APHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVG 108
           A ++VH           AL  F   A+Q    H  +S ++M+ ++ R  GR   +  +  
Sbjct: 78  AQNVVHMLRSAAADPAEALQLFKSVAQQPRIVHTTESCNYMLELM-RAHGRVRDMAQVFD 136

Query: 109 ELARVGCVIKAQTFL-LFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKI 167
            + R        TFL +F  +   G +    + A   M   G   N++  N ++  L K 
Sbjct: 137 LMQRQIVKANVGTFLTIFRSLGMEGGLRSAPV-ALPMMKEAGIVLNSYTYNGLIYFLVKS 195

Query: 168 GRVDLGIKVLK----ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMF 223
           G     ++V K    +  +P+  ++++ +    K  DV  V  ++  M   G  PNV  +
Sbjct: 196 GYDREAMEVYKVMATDGIVPSVRTYSVLMLAFGK-RDVETVVWLLREMEDHGVKPNVYSY 254

Query: 224 EILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQ 283
            I +    + GR  EAY++L  M   G    V   TVLI       R+  A  ++ KM  
Sbjct: 255 TICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKA 314

Query: 284 NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
           +   P+ VTY +L+    +           + ++++G+  ++V +  ++D L ++G  D+
Sbjct: 315 SDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDE 374

Query: 344 ALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLS 400
           A DV+D + +  + P  Y++ SL+S    + R +   +L   + +     +   Y   ++
Sbjct: 375 ASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFIN 434

Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
           Y+ K+G   +A+K Y  M  KG  PD  +   +L  L  + ++  A  V+  +       
Sbjct: 435 YYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCP 494

Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
           +   +T ++    +A    +A+++F   I  +   DV++    I  L + GR  EA+ ++
Sbjct: 495 DNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIF 554

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKF 580
            ++K + + P   TY  +L    +E  +K V  LL+++       +  T   +   + K 
Sbjct: 555 HELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKN 614

Query: 581 HSSSSAVNQLVEMCNLGLIPD 601
              + A+  L  M   G +PD
Sbjct: 615 GEVNYALGMLYNMTMKGCMPD 635



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 133/602 (22%), Positives = 234/602 (38%), Gaps = 126/602 (20%)

Query: 60   CPSDLIALSFFIWCAKQRDYFHDVQSFDHMI------------SVVTRL--TGRFETVRG 105
            CP ++        C+K  +    ++ F  MI            S++  L   GR      
Sbjct: 493  CPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWK 552

Query: 106  IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
            I  EL  +       T+   L    R      V+   +EM    + PN    N V+D L 
Sbjct: 553  IFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLC 612

Query: 166  KIGRVDLGIKVLKETQL----PNFLSFNIALCNL-------------CKLNDV------- 201
            K G V+  + +L    +    P+  S+N AL  L             C++  V       
Sbjct: 613  KNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMKKVLAPDYTT 672

Query: 202  ------SNVKDVI-----------------------------GMMVRKG------FYPNV 220
                  S VK+ +                             G++ R G      F  N+
Sbjct: 673  LCTILPSFVKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENI 732

Query: 221  RMFEILLNCF---------CKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
             +  ILL+ F         CK  +  EA++L+    +LG SL   ++  LI G      +
Sbjct: 733  ALSRILLDDFFLSPLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLI 792

Query: 272  DMAGYLWEKMVQNGCSPN-----------------------------------VVTYTSL 296
            D+A  L+ +M + GC P+                                    VTY ++
Sbjct: 793  DVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTI 852

Query: 297  IKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
            I G +++KM   A      L SEG +P    +  L+D L K G  +DA D++D +L+   
Sbjct: 853  ISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGC 912

Query: 357  VPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVK 413
             P+   +  LL+   L+G    + +L   +    +  D+  Y  L+   C AG  N ++ 
Sbjct: 913  KPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLS 972

Query: 414  LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
             +  + + G  PD  ++  L+ GL  + +++EA++++  +  +  A N + + +++  L 
Sbjct: 973  YFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLG 1032

Query: 474  EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
            + G+  +A +++   +   +  +V +Y   I G    G T+ A+  Y QM     PPN+ 
Sbjct: 1033 KEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSS 1092

Query: 534  TY 535
            TY
Sbjct: 1093 TY 1094



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 78/336 (23%), Positives = 152/336 (45%), Gaps = 36/336 (10%)

Query: 142  FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
            F EM R G  P+ F  N+++D + K  R++  +KV KE         ++++N  +  L K
Sbjct: 799  FSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVK 858

Query: 198  LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
               +    D+   ++ +GF P    +  LL+   K G+I +A  L   M+  G   +   
Sbjct: 859  SKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAI 918

Query: 258  WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
            + +L++G+R     +    L++ MV  G +P++ +YT LI     A   + + S+   L 
Sbjct: 919  YNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLT 978

Query: 318  SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
              G  PDL+ +N+LI  L + G  ++A+ +++ + +  + P+ YT               
Sbjct: 979  ELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYT--------------- 1023

Query: 378  LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
                             YN+L+ Y  K G   +A K+Y  +L  G+ P+ +++  L+ G 
Sbjct: 1024 -----------------YNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGY 1066

Query: 438  CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
              +   D A   Y  +++     N+  +  + ++L+
Sbjct: 1067 SVSGSTDNAFASYGQMIVGGCPPNSSTYMQLPNQLL 1102



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 123/583 (21%), Positives = 242/583 (41%), Gaps = 79/583 (13%)

Query: 97   TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
            +GR    + +  EL  +G      T+ + ++   +       ++ F EM      P+  A
Sbjct: 474  SGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLA 533

Query: 157  RNIVMDVLFKIGRVDLGIKV---LKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
             N ++D L+K GR +   K+   LKE  L P   ++N  L  L +   V  V  ++  M 
Sbjct: 534  VNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMN 593

Query: 213  RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
               + PN+  +  +L+C CK G +  A  +L  M   G    ++++   + G  +  RL 
Sbjct: 594  SNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLT 653

Query: 273  MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF-----------------SFLDM 315
             A  ++ +M +   +P+  T  +++  F++  + + A                  SF  +
Sbjct: 654  EAFRIFCQM-KKVLAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGSKADRSSFHSL 712

Query: 316  LE----------SEGHAPDLVFHNVLID-----------CLSK----------------- 337
            +E          S   A ++    +L+D           C SK                 
Sbjct: 713  MEGILKRAGMEKSIEFAENIALSRILLDDFFLSPLIRHLCKSKKALEAHELVKKFESLGV 772

Query: 338  ---MGSY---------DDALDVYDGLL-ELKLV---PDSYTFCSLLSTVCLSGRFSLLPK 381
                GSY         ++ +DV +GL  E+K +   PD +T+  +L  +  S R   + K
Sbjct: 773  SLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLK 832

Query: 382  LVCGLEV---EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
            +   +     E+  V YN ++S   K+    +A+ LY  ++ +GF+P   ++  LL GL 
Sbjct: 833  VQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLL 892

Query: 439  GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
               KI++A +++  ++      N  ++  +++    AG   K  +LF+  + +    D+ 
Sbjct: 893  KDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIK 952

Query: 499  SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
            SYTV I  L   GR  ++   + Q+  + + P+  TY +++    +   ++    L  D+
Sbjct: 953  SYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDM 1012

Query: 559  IDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
              + I  + +T   L  ++ K   ++ A     E+   G  P+
Sbjct: 1013 EKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPN 1055



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/203 (22%), Positives = 86/203 (42%), Gaps = 4/203 (1%)

Query: 98   GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
            G+ E    +  E+   GC      + + L  Y        V E F  M   G  P+  + 
Sbjct: 895  GKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSY 954

Query: 158  NIVMDVLFKIGRVDLGIKVLKE-TQL---PNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
             +++  L   GR++  +   ++ T+L   P+ +++N+ +  L +   +     +   M +
Sbjct: 955  TVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEK 1014

Query: 214  KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
             G  PN+  +  L+    K G+ AEA ++   ++  G   +V  +  LI G+      D 
Sbjct: 1015 SGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDN 1074

Query: 274  AGYLWEKMVQNGCSPNVVTYTSL 296
            A   + +M+  GC PN  TY  L
Sbjct: 1075 AFASYGQMIVGGCPPNSSTYMQL 1097


>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 623

 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 114/513 (22%), Positives = 214/513 (41%), Gaps = 40/513 (7%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLF---LRIYWRGEMYGMVLEAFDEMGRFGFTP 152
           ++ R  +VR +  EL      ++ ++ +LF   +R Y +  M    +E F  M   GF P
Sbjct: 130 VSTRKNSVRDLFDELVLAHDRLQTKSTILFDFMVRFYCQLRMVDEAIECFYLMKEKGFDP 189

Query: 153 NTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
            T   N ++ +L                                +LN + N       M 
Sbjct: 190 KTETCNHILSLL-------------------------------SRLNRIENAWVFYADMY 218

Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
           R     NV  F I++N  CK G++ +A   LG+M + G   ++  +  L+ G+    R++
Sbjct: 219 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIE 278

Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
            A  +  +M   G  P++ TY  ++           A   L  ++  G  PD V +N+LI
Sbjct: 279 GARMIISEMKSKGFQPDLQTYNPILSWMCNE---GRASEVLREMKGIGLVPDSVSYNILI 335

Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA-- 390
              S  G  + A    D +++  +VP  YT+ +L+  + +  +      L+  +  +   
Sbjct: 336 RGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIV 395

Query: 391 -DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            D V YN +++ +C+ G   +A  L++ M+  G  P  +++  L+  LC   K  EA  +
Sbjct: 396 LDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADEL 455

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
           ++ +V      +  +   ++D     G   +A  L +         D V+Y   +RGL  
Sbjct: 456 FEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCG 515

Query: 510 GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
            G+ EEA  L  +MK   + P+  +Y  ++  + K+ + K    +  +++         T
Sbjct: 516 EGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLT 575

Query: 570 SIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
              L K + K      A   L EM + G++P++
Sbjct: 576 YNALLKGLSKNQDGELAEELLREMKSEGIVPND 608



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/349 (24%), Positives = 151/349 (43%), Gaps = 10/349 (2%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
           L GR E  R I+ E+   G     QT+   L   W     G   E   EM   G  P++ 
Sbjct: 273 LRGRIEGARMIISEMKSKGFQPDLQTYNPILS--WMCN-EGRASEVLREMKGIGLVPDSV 329

Query: 156 ARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
           + NI++      G ++       +++K+  +P F ++N  +  L   N +   + +I  +
Sbjct: 330 SYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREI 389

Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
             KG   +   + I++N +C+ G   +A+ L   M+T G   +   +T LI    R  + 
Sbjct: 390 REKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKT 449

Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
             A  L+EK+V  G  P++V   +L+ G         AFS L  ++     PD V +N L
Sbjct: 450 READELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCL 509

Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEV 388
           +  L   G +++A ++   +    + PD  ++ +L+S     G      ++   +  L  
Sbjct: 510 MRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGF 569

Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
              L+ YNALL    K      A +L   M  +G  P++ SF  ++  +
Sbjct: 570 NPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPNDSSFCSVIEAM 618



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 83/387 (21%), Positives = 157/387 (40%), Gaps = 45/387 (11%)

Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
           +F+ ++  +C++  + EA +   LM   G          ++    RL R++ A   +  M
Sbjct: 158 LFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADM 217

Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
            +     NV T+  +I    +      A  FL ++ES G  P +V +N L+   S  G  
Sbjct: 218 YRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRI 277

Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSY 401
           + A  +   +      PD  T+  +LS +C  GR S + + + G+ +  D V YN L+  
Sbjct: 278 EGARMIISEMKSKGFQPDLQTYNPILSWMCNEGRASEVLREMKGIGLVPDSVSYNILIRG 337

Query: 402 FCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVN 461
               G    A    + M+ +G  P  Y++  L+ GL    KI+                 
Sbjct: 338 CSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIE----------------- 380

Query: 462 AHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK-YPLDVVSYTVAIRGLLEGGRTEEAYILY 520
                              A ++  R I EK   LD V+Y + I G  + G  ++A+ L+
Sbjct: 381 -------------------AAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALH 421

Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKF 580
            +M    + P  +TY  ++   C+    +    L + V+   ++ D    + +   +   
Sbjct: 422 DEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPD----LVMMNTLMDG 477

Query: 581 HSSSSAVNQ----LVEMCNLGLIPDEM 603
           H ++  +++    L EM  + + PD++
Sbjct: 478 HCATGNMDRAFSLLKEMDRMNIDPDDV 504



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 56/249 (22%), Positives = 111/249 (44%), Gaps = 10/249 (4%)

Query: 96  LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF---DEMGRFGFTP 152
           +  + E    ++ E+   G V+ + T+ + +  Y +   +G   +AF   DEM   G  P
Sbjct: 375 MENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQ---HGDAKKAFALHDEMMTDGIKP 431

Query: 153 NTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVI 208
             F    ++ VL +  +     +L  KV+ +   P+ +  N  +   C   ++     ++
Sbjct: 432 TQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLL 491

Query: 209 GMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRL 268
             M R    P+   +  L+   C  G+  EA +L+G M   G      ++  LI G+ + 
Sbjct: 492 KEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKK 551

Query: 269 RRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH 328
                A  + ++M+  G +P ++TY +L+KG  + +   +A   L  ++SEG  P+    
Sbjct: 552 GDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPNDSSF 611

Query: 329 NVLIDCLSK 337
             +I+ +SK
Sbjct: 612 CSVIEAMSK 620



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/168 (22%), Positives = 80/168 (47%), Gaps = 4/168 (2%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNL 195
           E F+++   G  P+    N +MD     G +D    +LKE       P+ +++N  +  L
Sbjct: 454 ELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGL 513

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
           C        ++++G M R+G  P+   +  L++ + K G    A+ +   M++LG + ++
Sbjct: 514 CGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTL 573

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
             +  L+ G  + +  ++A  L  +M   G  PN  ++ S+I+   ++
Sbjct: 574 LTYNALLKGLSKNQDGELAEELLREMKSEGIVPNDSSFCSVIEAMSKS 621


>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
 gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
 gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
          Length = 578

 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 95/386 (24%), Positives = 178/386 (46%), Gaps = 10/386 (2%)

Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNL 195
           +AF    R   +P+ +  N V+  L +IG++     V K+ +     P+  ++N  +   
Sbjct: 177 KAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGY 236

Query: 196 CKLNDVSNVKDV---IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
           CK     N+  V   +  MV  G  P    F +L+N +CK    A A ++   M   G +
Sbjct: 237 CKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIA 296

Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
            SV  +  LI G     +++    L E+M   G SPN +T+  ++KGF +  M + A  +
Sbjct: 297 ASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDW 356

Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
           +D +      PD+V +N+LID   ++G  +DA+ V + + +  + P+  T+  L++    
Sbjct: 357 IDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSR 416

Query: 373 SGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
           SG +     L+  ++   +EAD+V YN L+   C  G   +AVKL + M + G  P++ +
Sbjct: 417 SGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLT 476

Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
           +  +++G C    I  A  +   +       N   +   +    + G+  +A  L    +
Sbjct: 477 YNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEML 536

Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEE 515
            +    + ++Y     G++E G T +
Sbjct: 537 DKCLVPNGITYETIKEGMMEKGYTPD 562



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 171/375 (45%), Gaps = 13/375 (3%)

Query: 74  AKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWR-- 131
           A +R    D+ +F+ +IS + R+ G+      +  ++   G      T+   +  Y +  
Sbjct: 182 ALRRRVSPDIYTFNTVISGLCRI-GQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKG 240

Query: 132 --GEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNF 185
             G MY + +    EM   G +P      ++++   K       ++V +E +      + 
Sbjct: 241 GAGNMYHVDM-LLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASV 299

Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGL 245
           +++N  +  LC    V     ++  M   G  PN   F  +L  FCK G +A+A   +  
Sbjct: 300 VTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDG 359

Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
           M        V  + +LID +RRL +++ A  + E M + G SPNV TY  LI GF  +  
Sbjct: 360 MTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGD 419

Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
           +  A   LD ++ +G   D+V +NVLI  L   G    A+ + D + E+ L P+  T+ +
Sbjct: 420 WRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNT 479

Query: 366 LLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
           ++   C  G      ++   +E     A++V YN  + YFC+ G  ++A  L N MLDK 
Sbjct: 480 IIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKC 539

Query: 423 FTPDNYSFVGLLRGL 437
             P+  ++  +  G+
Sbjct: 540 LVPNGITYETIKEGM 554



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 102/453 (22%), Positives = 188/453 (41%), Gaps = 54/453 (11%)

Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
           P+  S N  L  L     V   +      +R+   P++  F  +++  C++G++ +A  +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 243 LGLMITLGTSLSVNAWTVLIDGFRR------LRRLDMAGYLWEKMVQNGCSPNVVTYTSL 296
              +   G + SV  +  LIDG+ +      +  +DM   L ++MV+ G SP  VT+  L
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDM---LLKEMVEAGISPTAVTFGVL 270

Query: 297 IKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
           I G+ +    + A    + ++ +G A  +V +N LI  L   G  ++ + + + + +L L
Sbjct: 271 INGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGL 330

Query: 357 VPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVK 413
            P+  TF  +L   C  G  +     + G+    VE D+V+YN L+  + + G    A+ 
Sbjct: 331 SPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMA 390

Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
           +   M  KG +P+  ++  L+ G   +     A                   + ++D + 
Sbjct: 391 VKEAMAKKGISPNVTTYNCLITGFSRSGDWRSA-------------------SGLLDEMK 431

Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
           E G                   DVV+Y V I  L   G   +A  L  +M  + + PN  
Sbjct: 432 EKG----------------IEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHL 475

Query: 534 TYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEM 593
           TY  ++  FC + NIK    +   +   R   +  T     K+  +      A + L EM
Sbjct: 476 TYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEM 535

Query: 594 CNLGLIPDEMWRKLGLLSDETMTPVSLFDGFVP 626
            +  L+P+        ++ ET+    +  G+ P
Sbjct: 536 LDKCLVPNG-------ITYETIKEGMMEKGYTP 561



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 67/324 (20%), Positives = 120/324 (37%), Gaps = 41/324 (12%)

Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL-- 378
           H P     N L+  L      D A   +   L  ++ PD YTF +++S +C  G+     
Sbjct: 152 HRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAG 211

Query: 379 -LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVK---LYNTMLDKGFTPDNYSFVGLL 434
            + K +    +   +  YN+L+  +CK G          L   M++ G +P   +F  L+
Sbjct: 212 DVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLI 271

Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR------- 487
            G C       A+ V++ +     A +   + +++  L   G+  + ++L          
Sbjct: 272 NGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLS 331

Query: 488 ---------------------------AIVEK-YPLDVVSYTVAIRGLLEGGRTEEAYIL 519
                                       + E+    DVV Y + I      G+ E+A  +
Sbjct: 332 PNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAV 391

Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK 579
              M    + PN  TY  ++  F +  + +    LL ++ +  IE D  T   L   +  
Sbjct: 392 KEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCC 451

Query: 580 FHSSSSAVNQLVEMCNLGLIPDEM 603
                 AV  L EM  +GL P+ +
Sbjct: 452 KGEVRKAVKLLDEMSEVGLEPNHL 475


>gi|242062032|ref|XP_002452305.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
 gi|241932136|gb|EES05281.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
          Length = 347

 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 158/315 (50%), Gaps = 7/315 (2%)

Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCN 194
           ++  DEM   G  P+    N+V++ + + GRVD  ++ L+        PN +S+NI L  
Sbjct: 1   MKLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKG 60

Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
           L       + + ++  M  KG  PNV  F +L++  C+ G +  A ++L  +   G + +
Sbjct: 61  LFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPN 120

Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
             ++  L+  F + +++D A    E MV  GC P++V+Y +L+          +A   L 
Sbjct: 121 SLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLH 180

Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            L+ +G +P L+ +N +ID L+K G   +AL++ D ++   L PD  T+ ++ S +C   
Sbjct: 181 QLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCRED 240

Query: 375 RFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
           +     +  C ++   +   +V+YNA+L   CK    + A+ L++ M+  G  P+  ++ 
Sbjct: 241 KIEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYT 300

Query: 432 GLLRGLCGARKIDEA 446
            L+ GL     + EA
Sbjct: 301 ILVEGLAYEGLVKEA 315



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 81/337 (24%), Positives = 151/337 (44%), Gaps = 11/337 (3%)

Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
           L ++M   GC+P+++TY  ++ G  +      A  FL+ L S G  P+ V +N+++  L 
Sbjct: 3   LLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLF 62

Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-------FSLLPKLVCGLEVE 389
               ++DA  + + +      P+  TF  L+S +C  G           +PK  C     
Sbjct: 63  TAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGC----T 118

Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
            + + YN LL  FCK    ++A+     M+ +G  PD  S+  LL  LC   ++D AI++
Sbjct: 119 PNSLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDL 178

Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
              +     +     +  ++D L +AG+  +A++L    I +    D+++YT    GL  
Sbjct: 179 LHQLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCR 238

Query: 510 GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
             + EEA   + +++ + + P    Y  +LL  CK R       L   +I      +  T
Sbjct: 239 EDKIEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNEST 298

Query: 570 SIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRK 606
              L + +        A + L ++C+ G++  +  +K
Sbjct: 299 YTILVEGLAYEGLVKEARDLLGQLCSRGVVNKKFMKK 335



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 125/281 (44%), Gaps = 4/281 (1%)

Query: 98  GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
           GR +     +  L   G      ++ + L+  +  E +    +  +EM   G  PN    
Sbjct: 30  GRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTF 89

Query: 158 NIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
           N+++  L + G V+  ++VL++       PN LS+N  L   CK   +      + +MV 
Sbjct: 90  NMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFVELMVS 149

Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
           +G YP++  +  LL   C+ G +  A  LL  +   G S  + ++  +IDG  +  +   
Sbjct: 150 RGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLISYNTVIDGLTKAGKTKE 209

Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
           A  L ++M+  G  P+++TYT++  G         A      ++  G  P +V +N ++ 
Sbjct: 210 ALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKVQDMGIRPTVVLYNAILL 269

Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
            L K     +A+D++  ++    +P+  T+  L+  +   G
Sbjct: 270 GLCKRRETHNAIDLFSYMISNGCMPNESTYTILVEGLAYEG 310



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/253 (22%), Positives = 117/253 (46%), Gaps = 4/253 (1%)

Query: 99  RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
           R+E    ++ E+A  GC     TF + +    R  +    +E  +++ ++G TPN+ + N
Sbjct: 66  RWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYN 125

Query: 159 IVMDVLFKIGRVDLGIK----VLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
            ++    K  ++D  +     ++     P+ +S+N  L  LC+  +V    D++  +  K
Sbjct: 126 PLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGK 185

Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
           G  P +  +  +++   K G+  EA +LL  MI+ G    +  +T +  G  R  +++ A
Sbjct: 186 GCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEA 245

Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
              + K+   G  P VV Y +++ G  + +    A      + S G  P+   + +L++ 
Sbjct: 246 IRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILVEG 305

Query: 335 LSKMGSYDDALDV 347
           L+  G   +A D+
Sbjct: 306 LAYEGLVKEARDL 318



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 109/243 (44%), Gaps = 5/243 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           +V +F+ +IS + R  G  E    ++ ++ + GC   + ++   L  + + +     +  
Sbjct: 85  NVVTFNMLISFLCR-RGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAF 143

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
            + M   G  P+  + N ++  L + G VD+ I +L + +     P  +S+N  +  L K
Sbjct: 144 VELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLISYNTVIDGLTK 203

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
                   +++  M+ KG  P++  +  + +  C+  +I EA +    +  +G   +V  
Sbjct: 204 AGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKVQDMGIRPTVVL 263

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +  ++ G  + R    A  L+  M+ NGC PN  TYT L++G     +   A   L  L 
Sbjct: 264 YNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILVEGLAYEGLVKEARDLLGQLC 323

Query: 318 SEG 320
           S G
Sbjct: 324 SRG 326



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/294 (21%), Positives = 127/294 (43%), Gaps = 38/294 (12%)

Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
              LD +  +G APD++ +NV+++ + + G  DDA++  + L      P++ ++  +L  
Sbjct: 1   MKLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKG 60

Query: 370 VCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
           +  + R+    KL+  +  +    ++V +N L+S+ C+ G    A+++   +   G TP+
Sbjct: 61  LFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPN 120

Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
           + S+  LL   C  +K+D+A+                   A V+ ++  G C        
Sbjct: 121 SLSYNPLLHAFCKQKKMDKAM-------------------AFVELMVSRG-C-------- 152

Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
                 YP D+VSY   +  L   G  + A  L  Q+K     P   +Y  ++    K  
Sbjct: 153 ------YP-DIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLISYNTVIDGLTKAG 205

Query: 547 NIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
             K    LL ++I   ++ D  T   +   + +      A+    ++ ++G+ P
Sbjct: 206 KTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKVQDMGIRP 259


>gi|21686921|gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1833

 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 110/435 (25%), Positives = 183/435 (42%), Gaps = 44/435 (10%)

Query: 64   LIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFL 123
            + A  FF+W   Q  Y H   S+D M+ ++ +   +F+ + G++ ++  VG ++   T  
Sbjct: 1426 VAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFK-QFDLMWGLINQMVEVGGLMSLMTMT 1484

Query: 124  LFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE---T 180
              +R       +   ++AF +M RFG   +T A N+++D L K   V     V +E   T
Sbjct: 1485 KVMRRLAGASRWTEAIDAFHKMDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELRGT 1544

Query: 181  QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAY 240
              P+  SFN  +   CK   +    D +  M + GF P+V  +  L+  +C        Y
Sbjct: 1545 IPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVY 1604

Query: 241  QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
             LL  M                    R RR               C PNVVTYT L+   
Sbjct: 1605 ALLDEM--------------------RKRR---------------CPPNVVTYTILMHAL 1629

Query: 301  MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
             +A     A    D L+ +G APD  F+N LI  L + G  +DA  V + +    + P+ 
Sbjct: 1630 GKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNV 1689

Query: 361  YTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNT 417
             TF +L+S  C   +     KL+  +E ++   D+  Y  LL   CK  +    + L   
Sbjct: 1690 TTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLFLVCH 1749

Query: 418  MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG- 476
            M  K  +PD  ++  L+  LC   K+ ++    + +V    A        ++++L +   
Sbjct: 1750 MFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPKQETFDLVMEKLEKRNL 1809

Query: 477  -RCHKAIQLFRRAIV 490
               +K IQ+ R  + 
Sbjct: 1810 QSVYKKIQVLRTQVT 1824



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 71/354 (20%), Positives = 150/354 (42%), Gaps = 10/354 (2%)

Query: 255  VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
             +++ +++D   + ++ D+   L  +MV+ G   +++T T +++    A  ++ A     
Sbjct: 1445 ADSYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFH 1504

Query: 315  MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
             ++  G   D    NVL+D L K  S   A  V+  L    + PD  +F +L+   C   
Sbjct: 1505 KMDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQEL-RGTIPPDENSFNTLVHGWC--- 1560

Query: 375  RFSLLPKLVCGLE------VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
            +  +L + +  +E          +V Y +L+  +C          L + M  +   P+  
Sbjct: 1561 KARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVV 1620

Query: 429  SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
            ++  L+  L  A +  EA++ +  +  +  A +A  + +++  L  AGR   A  +    
Sbjct: 1621 TYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEM 1680

Query: 489  IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
                   +V ++   I    +  + E A  L  +M+  +  P+  TY  +L   CK + +
Sbjct: 1681 RTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWV 1740

Query: 549  KMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
            K++  L+  +    I  D+ T   L  ++ +    + +   L EM + G  P +
Sbjct: 1741 KILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPKQ 1794


>gi|218193742|gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
          Length = 1874

 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 110/435 (25%), Positives = 183/435 (42%), Gaps = 44/435 (10%)

Query: 64   LIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFL 123
            + A  FF+W   Q  Y H   S+D M+ ++ +   +F+ + G++ ++  VG ++   T  
Sbjct: 1467 VAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFK-QFDLMWGLINQMVEVGGLMSLMTMT 1525

Query: 124  LFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE---T 180
              +R       +   ++AF +M RFG   +T A N+++D L K   V     V +E   T
Sbjct: 1526 KVMRRLAGASRWTEAIDAFHKMDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELRGT 1585

Query: 181  QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAY 240
              P+  SFN  +   CK   +    D +  M + GF P+V  +  L+  +C        Y
Sbjct: 1586 IPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVY 1645

Query: 241  QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
             LL  M                    R RR               C PNVVTYT L+   
Sbjct: 1646 ALLDEM--------------------RKRR---------------CPPNVVTYTILMHAL 1670

Query: 301  MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
             +A     A    D L+ +G APD  F+N LI  L + G  +DA  V + +    + P+ 
Sbjct: 1671 GKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNV 1730

Query: 361  YTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNT 417
             TF +L+S  C   +     KL+  +E ++   D+  Y  LL   CK  +    + L   
Sbjct: 1731 TTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLFLVCH 1790

Query: 418  MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG- 476
            M  K  +PD  ++  L+  LC   K+ ++    + +V    A        ++++L +   
Sbjct: 1791 MFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPKQETFDLVMEKLEKRNL 1850

Query: 477  -RCHKAIQLFRRAIV 490
               +K IQ+ R  + 
Sbjct: 1851 QSVYKKIQVLRTQVT 1865



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 71/354 (20%), Positives = 150/354 (42%), Gaps = 10/354 (2%)

Query: 255  VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
             +++ +++D   + ++ D+   L  +MV+ G   +++T T +++    A  ++ A     
Sbjct: 1486 ADSYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFH 1545

Query: 315  MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
             ++  G   D    NVL+D L K  S   A  V+  L    + PD  +F +L+   C   
Sbjct: 1546 KMDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQEL-RGTIPPDENSFNTLVHGWC--- 1601

Query: 375  RFSLLPKLVCGLE------VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
            +  +L + +  +E          +V Y +L+  +C          L + M  +   P+  
Sbjct: 1602 KARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVV 1661

Query: 429  SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
            ++  L+  L  A +  EA++ +  +  +  A +A  + +++  L  AGR   A  +    
Sbjct: 1662 TYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEM 1721

Query: 489  IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
                   +V ++   I    +  + E A  L  +M+  +  P+  TY  +L   CK + +
Sbjct: 1722 RTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWV 1781

Query: 549  KMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
            K++  L+  +    I  D+ T   L  ++ +    + +   L EM + G  P +
Sbjct: 1782 KILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPKQ 1835


>gi|302801478|ref|XP_002982495.1| hypothetical protein SELMODRAFT_116601 [Selaginella moellendorffii]
 gi|300149594|gb|EFJ16248.1| hypothetical protein SELMODRAFT_116601 [Selaginella moellendorffii]
          Length = 448

 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/384 (25%), Positives = 187/384 (48%), Gaps = 11/384 (2%)

Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNV 204
           G+ P+     +++D   ++ RV    ++ +E +        L++N  L  L    D    
Sbjct: 40  GYDPDVVTCGLLVDKFCEMKRVGEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGG 99

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
                + V  G  P+V  ++ +L+C  K G+  EA +++G MI       +  +T LI  
Sbjct: 100 FKFSDIAVGDGSLPHVLAYKTMLDCLIKTGKTREASEVVGEMIKKSVPDGMT-YTALISV 158

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS-FLDMLESEGHAP 323
             +  R D A  +++ MV+    PN+  YTSL+      +    A+  F++M++  G+ P
Sbjct: 159 LCKHNRADDAMKVFDIMVEKEIVPNLDVYTSLLAAHCRTRKLDGAYRLFVEMIQ-RGYGP 217

Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LL 379
               + +L+ CL   G    A D++  +     VPD  T+ SL+   C++GR +    L 
Sbjct: 218 SASTYGLLLRCLCNGGRSYLAYDIHSSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLF 277

Query: 380 PKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
            +++ G +   D  +YN L+   C+A    +A+++   M+DKG  P   ++  L+ G   
Sbjct: 278 KEVLEGEKALLDAGIYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFK 337

Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
           A ++D+A+ +++ +     + N  +++  +D L + G+ ++A + F++++      D V+
Sbjct: 338 ANEVDKALQLFRVMEEKGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVT 397

Query: 500 YTVAIRGLLEGGRTEEAYILYSQM 523
           Y   IRGL    R +EA+ LY +M
Sbjct: 398 YNALIRGLFGANRMDEAHRLYREM 421



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 100/439 (22%), Positives = 198/439 (45%), Gaps = 11/439 (2%)

Query: 176 VLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGR 235
           +L++  +P+  S+N+ +  L KL+ V   + ++  MV +G+ P+V    +L++ FC+M R
Sbjct: 1   MLEDGVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKR 60

Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
           + E  +L   + + G ++ + A+  ++         D      +  V +G  P+V+ Y +
Sbjct: 61  VGEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKT 120

Query: 296 LIKGFMEAKMFSIAFSFL-DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
           ++   ++      A   + +M++     PD + +  LI  L K    DDA+ V+D ++E 
Sbjct: 121 MLDCLIKTGKTREASEVVGEMIKKS--VPDGMTYTALISVLCKHNRADDAMKVFDIMVEK 178

Query: 355 KLVPDSYTFCSLLSTVC----LSGRFSLLPKLVC-GLEVEADLVVYNALLSYFCKAGFPN 409
           ++VP+   + SLL+  C    L G + L  +++  G    A    Y  LL   C  G   
Sbjct: 179 EIVPNLDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSAS--TYGLLLRCLCNGGRSY 236

Query: 410 QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA-VNAHVHTAI 468
            A  ++++M  +G  PD  ++  L+ G C A +I EA  +++ ++    A ++A ++  +
Sbjct: 237 LAYDIHSSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKALLDAGIYNVL 296

Query: 469 VDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAV 528
           ++ L  A +  +A+++    + +     + +Y   I G  +    ++A  L+  M+    
Sbjct: 297 IEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRVMEEKGF 356

Query: 529 PPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVN 588
            PN   Y   +   CK   I       Q  ++     D  T   L + +F  +    A  
Sbjct: 357 SPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDEAHR 416

Query: 589 QLVEMCNLGLIPDEMWRKL 607
              EM   G I D   R L
Sbjct: 417 LYREMGERGYIADRSLRTL 435



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/432 (24%), Positives = 193/432 (44%), Gaps = 10/432 (2%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           D  S++ ++  +T+L+   +  R ++  +   G      T  L +  +   +  G V E 
Sbjct: 9   DRDSYNLLVRGLTKLSS-VDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKRVGEVCEL 67

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIK----VLKETQLPNFLSFNIALCNLCK 197
           F E+   G      A N ++  L   G  D G K     + +  LP+ L++   L  L K
Sbjct: 68  FQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKTMLDCLIK 127

Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
                   +V+G M++K   P+   +  L++  CK  R  +A ++  +M+      +++ 
Sbjct: 128 TGKTREASEVVGEMIKKSV-PDGMTYTALISVLCKHNRADDAMKVFDIMVEKEIVPNLDV 186

Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
           +T L+    R R+LD A  L+ +M+Q G  P+  TY  L++         +A+     + 
Sbjct: 187 YTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLAYDIHSSMR 246

Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE-LKLVPDSYTFCSLLSTVCLSGRF 376
           S GH PD   +  LI      G   +A  ++  +LE  K + D+  +  L+  +C + + 
Sbjct: 247 SRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKALLDAGIYNVLIEGLCRASKV 306

Query: 377 SLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
               ++  G+  +     L  YNAL+  F KA   ++A++L+  M +KGF+P+   +   
Sbjct: 307 EEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRVMEEKGFSPNTMIYSTF 366

Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
           + GLC   KI+EA   +Q  V      +   + A++  L  A R  +A +L+R      Y
Sbjct: 367 IDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDEAHRLYREMGERGY 426

Query: 494 PLDVVSYTVAIR 505
             D    T+A +
Sbjct: 427 IADRSLRTLAFQ 438


>gi|359483659|ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 124/616 (20%), Positives = 262/616 (42%), Gaps = 70/616 (11%)

Query: 4   RCKRSLFYTAQRTQILK----TIISFKSIHQISSPKVCATTHQDFPIILAPHIVHSTLLN 59
           +  +S+F  ++  +++     + I   S+  + S  +  T     P+    HI H  +L 
Sbjct: 50  KASKSMFNISKYAKLIMFCNVSNIGRSSVVNLQSKPISTT-----PVPTHQHIAH-LILE 103

Query: 60  CPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGEL-ARVGCVIK 118
             S   AL  F W +   ++ H+  ++  +I  +     RFETV+ ++ E+ + +G    
Sbjct: 104 QKSASQALQTFRWASNLPNFIHNQSTYRALIHKLCSFR-RFETVKEVLDEMPSSIGSPPD 162

Query: 119 AQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK 178
              F+  +R   R  M   +++  D + +FG  P+    N ++DVL K   +DL  +  +
Sbjct: 163 ESIFVTIVRGLGRARMVRQMIKVLDLITKFGENPSLKIFNSILDVLVK-EDIDLAREFYR 221

Query: 179 ETQLPNFLS-----FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKM 233
           +  + N +S     F I +  LC  N + +   ++ +M  +G  PN  ++  +++  CK 
Sbjct: 222 KKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKN 281

Query: 234 GRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTY 293
           G++  A  L+  M+                                        P+ VT+
Sbjct: 282 GKVGRARSLMNEMV---------------------------------------EPSDVTF 302

Query: 294 TSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE 353
             LI  + + +    A   L+   S G  PD+V    ++  L K G   + ++V + +  
Sbjct: 303 NVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVES 362

Query: 354 LKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQ 410
           +  V D   + +L+   C+ G+  +  +++  +E++    ++  YN L S +C +G  + 
Sbjct: 363 MGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGMLDS 422

Query: 411 AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV--HTAI 468
           A+ L+N M   G   +  ++  L+RGLC   ++++   + + +  +       +  + +I
Sbjct: 423 AIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPYNSI 482

Query: 469 VDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAV 528
           +  L +  +  +A++   +  +EK     V  ++ I G    G   +A  +Y QM     
Sbjct: 483 IYGLYKKNQFEEALEFLTK--MEKLFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEGG 540

Query: 529 PPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSS---SS 585
            P+   Y  ++  FC++ N++    L+ +++D      + T+      I  F       S
Sbjct: 541 VPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGY---FPTAPTFNALISAFCGQGKVGS 597

Query: 586 AVNQLVEMCNLGLIPD 601
           A+  + +M   G +PD
Sbjct: 598 ALKLMEDMVGRGCLPD 613



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/404 (23%), Positives = 177/404 (43%), Gaps = 3/404 (0%)

Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNV 204
           M   G TPNT   N ++  L K G+V     ++ E   P+ ++FN+ +   C+  ++   
Sbjct: 259 MKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMNEMVEPSDVTFNVLISAYCQEENLVQA 318

Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
             ++      GF P+V     ++   CK GR+ E  ++L  + ++G  + V A+  LI G
Sbjct: 319 LVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKG 378

Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
           F  L +  +   + + M   GC PNV TY  L  G+ ++ M   A    + ++++G   +
Sbjct: 379 FCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWN 438

Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS--YTFCSLLSTVCLSGRFSLLPKL 382
            + ++ LI  L   G  +D   + + + E +         + S++  +    +F    + 
Sbjct: 439 FMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEF 498

Query: 383 VCGLEVEADLVVYNAL-LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
           +  +E      V  +L +  FC  G    A ++Y+ M+ +G  P    +V L+ G C   
Sbjct: 499 LTKMEKLFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDG 558

Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYT 501
            + EA  +   +V +     A    A++      G+   A++L    +      D+ SY+
Sbjct: 559 NVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYS 618

Query: 502 VAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
             +  L   G  ++A  L+ QM    + P+  T+  MLL   +E
Sbjct: 619 PMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTWNSMLLCLTQE 662



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 106/440 (24%), Positives = 182/440 (41%), Gaps = 47/440 (10%)

Query: 60  CPSDLIALSF-FIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIK 118
           C ++ I  +F  +   K R    +   ++ MI  + +  G+    R ++ E+     V  
Sbjct: 244 CLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHALCK-NGKVGRARSLMNEMVEPSDV-- 300

Query: 119 AQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK 178
             TF + +  Y + E     L   ++    GF P+      V+ +L K GRV  G++VL+
Sbjct: 301 --TFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLE 358

Query: 179 ETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
             +    + + +++N  +   C L        V+  M  KG  PNV  + IL + +C  G
Sbjct: 359 RVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSG 418

Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN--GCSPNVVT 292
            +  A  L   M T G + +   +  LI G     R++    + E M ++  G    +  
Sbjct: 419 MLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISP 478

Query: 293 YTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
           Y S+I G  +   F  A  FL  +E     P  V  ++ I      GS  DA  VYD ++
Sbjct: 479 YNSIIYGLYKKNQFEEALEFLTKMEK--LFPRAVDRSLRILGFCNEGSIGDAKRVYDQMI 536

Query: 353 ELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAV 412
           +   VP                                 ++VY  L+  FC+ G   +A 
Sbjct: 537 KEGGVP--------------------------------SVLVYVCLIHGFCQDGNVREAF 564

Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
           +L N M+D G+ P   +F  L+   CG  K+  A+ + + +V      +   ++ +VD L
Sbjct: 565 ELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDAL 624

Query: 473 IEAGRCHKAIQLFRRAIVEK 492
              G   KA++LF + +VEK
Sbjct: 625 CNKGDFQKAVRLFLQ-MVEK 643



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/298 (22%), Positives = 129/298 (43%), Gaps = 11/298 (3%)

Query: 82  DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
           DV +++ +I     L G+ +    ++ ++   GC+    T+ +    Y    M    ++ 
Sbjct: 368 DVVAYNTLIKGFCML-GKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDL 426

Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP------NFLSFNIALCNL 195
           F++M   G   N    + ++  L   GR++ G K+L+  +            +N  +  L
Sbjct: 427 FNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPYNSIIYGL 486

Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
            K N      + +  M +   +P      + +  FC  G I +A ++   MI  G   SV
Sbjct: 487 YKKNQFEEALEFLTKMEK--LFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSV 544

Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
             +  LI GF +   +  A  L  +MV +G  P   T+ +LI  F        A   ++ 
Sbjct: 545 LVYVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLMED 604

Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
           +   G  PD+  ++ ++D L   G +  A+ ++  ++E  ++PD  T+ S+L  +CL+
Sbjct: 605 MVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTWNSML--LCLT 660


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.328    0.142    0.434 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,714,499,137
Number of Sequences: 23463169
Number of extensions: 397618805
Number of successful extensions: 1191357
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6282
Number of HSP's successfully gapped in prelim test: 4880
Number of HSP's that attempted gapping in prelim test: 993385
Number of HSP's gapped (non-prelim): 68366
length of query: 645
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 496
effective length of database: 8,863,183,186
effective search space: 4396138860256
effective search space used: 4396138860256
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 80 (35.4 bits)