BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006437
(645 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3EDA9|PPR46_ARATH Putative pentatricopeptide repeat-containing protein At1g16830
OS=Arabidopsis thaliana GN=At1g16830 PE=3 SV=2
Length = 608
Score = 467 bits (1202), Expect = e-130, Method: Compositional matrix adjust.
Identities = 248/598 (41%), Positives = 364/598 (60%), Gaps = 20/598 (3%)
Query: 1 MLWRCKRSLFYTAQRTQILKTIISFKSIHQISSPKVCAT---THQDFPIILAPHIVHSTL 57
MLWRC + QR +IL T+ SF SIH + A TH + V+S L
Sbjct: 1 MLWRCN----WVKQRKRILNTL-SFSSIHGQYPREYTAAKPLTHDN---------VYSCL 46
Query: 58 LNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVI 117
P+DL L+FF WCAKQ +YFHD ++FDHM+ VV +LT + ++ I+ L GC I
Sbjct: 47 RESPADLKTLNFFFWCAKQNNYFHDDRAFDHMVGVVEKLTREYYSIDRIIERLKISGCEI 106
Query: 118 KAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL 177
K + FLL L I+WRG +Y +E + M FGF PNT A N++MDV FK+ V+ +++
Sbjct: 107 KPRVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIF 166
Query: 178 KETQLPNFLSFNIALCNLCKLN---DVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
+ + NF SF+IAL + C D+ VK V+ M+ +GFYPN F +L C+ G
Sbjct: 167 EGIRFRNFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTG 226
Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
++EA+Q++GLMI G S+SVN W++L+ GF R A L+ KM+Q GCSPN+VTYT
Sbjct: 227 CVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYT 286
Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
SLIKGF++ M AF+ L ++SEG APD+V N++I +++G +++A V+ L +
Sbjct: 287 SLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKR 346
Query: 355 KLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKL 414
KLVPD YTF S+LS++CLSG+F L+P++ G+ + DLV N L + F K G+ + A+K+
Sbjct: 347 KLVPDQYTFASILSSLCLSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKV 406
Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
+ M K F D Y++ L LC AI +Y+ I+ ++AH H+AI+D LIE
Sbjct: 407 LSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIE 466
Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
G+ + A+ LF+R I+EKYPLDVVSYTVAI+GL+ R EEAY L MK + PN T
Sbjct: 467 LGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRT 526
Query: 535 YRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVE 592
YR ++ CKE+ + V+++L++ I +ELD +T ++ + ++ S + E
Sbjct: 527 YRTIISGLCKEKETEKVRKILRECIQEGVELDPNTKFQVYSLLSRYRGDFSEFRSVFE 584
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 189 bits (481), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 214/424 (50%), Gaps = 7/424 (1%)
Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDV 207
P+ F N ++ + K+ + DL I + ++ Q N ++NI + C+ + +S +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
+G M++ G+ P++ LLN +C RI++A L+ M+ +G +T LI G
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
+ A L ++MVQ GC PN+VTY ++ G + +AF+ L+ +E+ D+V
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL- 386
N +ID L K DDAL+++ + + P+ T+ SL+S +C GR+S +L+ +
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 387 --EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
++ +LV +NAL+ F K G +A KL++ M+ + PD +++ L+ G C ++D
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
+A +++ +V + + + ++ ++ R +LFR D V+YT I
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367
Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
+GL G + A ++ QM VPP+ TY ++L C ++ + + + I+
Sbjct: 368 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 427
Query: 565 LDYH 568
LD +
Sbjct: 428 LDIY 431
Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 117/480 (24%), Positives = 228/480 (47%), Gaps = 10/480 (2%)
Query: 85 SFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDE 144
F+ ++S + ++ +F+ V + ++ R+G T+ + + + R + L +
Sbjct: 12 EFNKLLSAIAKMK-KFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGK 70
Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET----QLPNFLSFNIALCNLCKLND 200
M + G+ P+ + +++ R+ + ++ + P+ ++F + L N
Sbjct: 71 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 130
Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
S ++ MV++G PN+ + +++N CK G I A+ LL M V +
Sbjct: 131 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNT 190
Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL-DMLESE 319
+ID + R +D A L+++M G PNVVTY+SLI +S A L DM+E +
Sbjct: 191 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 250
Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
+ P+LV N LID K G + +A ++D +++ + PD +T+ SL++ C+ R
Sbjct: 251 IN-PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKA 309
Query: 380 PKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
++ + + DL YN L+ FCK+ +L+ M +G D ++ L++G
Sbjct: 310 KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 369
Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
L D A V++ +V + + ++ ++D L G+ KA+++F + LD
Sbjct: 370 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 429
Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
+ YT I G+ + G+ ++ + L+ + V PN TY M+ C +R ++ LL+
Sbjct: 430 IYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLK 489
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 191/428 (44%), Gaps = 32/428 (7%)
Query: 176 VLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGR 235
++K LP+ FN L + K+ V + M R G N+ + IL+NCFC+ +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
I+ A LLG M+ LG S+ + L++G+ +R+ A L ++MV+ G P+ +T+T+
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
LI G S A + +D + G P+LV + V+++ L K G D A
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA----------- 169
Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLY 415
F+LL K+ ++EAD+V++N ++ CK + A+ L+
Sbjct: 170 --------------------FNLLNKMEAA-KIEADVVIFNTIIDSLCKYRHVDDALNLF 208
Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
M KG P+ ++ L+ LC + +A + ++ N A++D ++
Sbjct: 209 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 268
Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
G+ +A +L I D+ +Y I G R ++A ++ M P+ TY
Sbjct: 269 GKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTY 328
Query: 536 RVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCN 595
++ FCK + ++ L +++ + D T L + +F +A +M +
Sbjct: 329 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 388
Query: 596 LGLIPDEM 603
G+ PD M
Sbjct: 389 DGVPPDIM 396
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 145/306 (47%), Gaps = 7/306 (2%)
Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK---ETQL-PNFLSFNIALC 193
L F EM G PN + ++ L GR ++L E ++ PN ++FN +
Sbjct: 204 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 263
Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
K + + M+++ P++ + L+N FC R+ +A Q+ M++
Sbjct: 264 AFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFP 323
Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
++ + LI GF + +R++ L+ +M G + VTYT+LI+G A
Sbjct: 324 DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 383
Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
+ S+G PD++ +++L+D L G + AL+V+D + + ++ D Y + +++ +C +
Sbjct: 384 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 443
Query: 374 GRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
G+ L C L V+ ++V YN ++S C +A L M + G PD+ ++
Sbjct: 444 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTY 503
Query: 431 VGLLRG 436
L+R
Sbjct: 504 NTLIRA 509
Score = 76.6 bits (187), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 104/230 (45%), Gaps = 5/230 (2%)
Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDV 207
P+ N ++ K RV+ G ++ +E + + +++ + L D N + V
Sbjct: 323 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 382
Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
MV G P++ + ILL+ C G++ +A ++ M L + +T +I+G +
Sbjct: 383 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 442
Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
++D L+ + G PNVVTY ++I G ++ A++ L ++ +G PD
Sbjct: 443 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGT 502
Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
+N LI + G + ++ + + V D+ T L++ + GR
Sbjct: 503 YNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI-GLVANMLHDGRLD 551
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/551 (23%), Positives = 263/551 (47%), Gaps = 25/551 (4%)
Query: 32 SSPKVCATTHQDFPIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMIS 91
+SP A + D ++ +L + P D AL F +K+ ++ + ++ ++
Sbjct: 39 ASPHSAALSSTDVKLL-------DSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILL 91
Query: 92 VVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEM-GRFGF 150
+ R +G F+ ++ I+ ++ C + TFL+ + Y + E+ +L D M FG
Sbjct: 92 RLGR-SGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGL 150
Query: 151 TPNTFARNIVMDVLF--------KIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVS 202
P+T N ++++L +I + + +K P+ +FN+ + LC+ + +
Sbjct: 151 KPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIK----PDVSTFNVLIKALCRAHQLR 206
Query: 203 NVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLI 262
++ M G P+ + F ++ + + G + A ++ M+ G S S + V++
Sbjct: 207 PAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIV 266
Query: 263 DGFRRLRRL-DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGH 321
GF + R+ D ++ E Q+G P+ T+ +L+ G +A A +D++ EG+
Sbjct: 267 HGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGY 326
Query: 322 APDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF---SL 378
PD+ +N +I L K+G +A++V D ++ P++ T+ +L+ST+C + +
Sbjct: 327 DPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE 386
Query: 379 LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
L +++ + D+ +N+L+ C A++L+ M KG PD +++ L+ LC
Sbjct: 387 LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLC 446
Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
K+DEA+N+ + + ++ A + + ++D +A + +A ++F V + V
Sbjct: 447 SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSV 506
Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
+Y I GL + R E+A L QM P+ YTY +L FC+ +IK ++Q +
Sbjct: 507 TYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAM 566
Query: 559 IDARIELDYHT 569
E D T
Sbjct: 567 TSNGCEPDIVT 577
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 182/422 (43%), Gaps = 42/422 (9%)
Query: 98 GRFETVRGIVGELARVGCVIKAQ-TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
GR E + E++ Q TF + + +E D M + G+ P+ +
Sbjct: 273 GRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYT 332
Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
N V+ L K+G V ++VL + PN +++N + LCK N V ++ ++
Sbjct: 333 YNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLT 392
Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
KG P+V F L+ C A +L M + G + +LID +LD
Sbjct: 393 SKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLD 452
Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
A + ++M +GC+ +V+TY +LI GF +A A D +E G + + V +N LI
Sbjct: 453 EALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLI 512
Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VE 389
D L K +DA + D ++ PD YT+ SLL+ C G +V + E
Sbjct: 513 DGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCE 572
Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
D+V Y L+S CKAG A KL ++ KG +++ +++GL RK EAIN+
Sbjct: 573 PDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINL 632
Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
++ ++ N A P D VSY + RGL
Sbjct: 633 FREMLEQNEA----------------------------------PPDAVSYRIVFRGLCN 658
Query: 510 GG 511
GG
Sbjct: 659 GG 660
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 128/489 (26%), Positives = 240/489 (49%), Gaps = 33/489 (6%)
Query: 127 RIYWRGEMYGMVLEAFDEMGRFGFT------PNTFARNIVMDVLFKIGRVDLGIKVLKET 180
R R ++ M L+ D +G FG P+ F N ++ + K+ + DL I + ++
Sbjct: 54 REILRNGLHSMKLD--DAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKM 111
Query: 181 QL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
Q N ++NI + C+ + +S ++G M++ G+ P++ LLN +C RI
Sbjct: 112 QRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171
Query: 237 AEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSL 296
++A L+ M+ +G +T LI G + A L ++MVQ GC PN+VTY +
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231
Query: 297 IKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
+ G + +AF+ L+ +E+ ++V ++ +ID L K DDAL+++ + +
Sbjct: 232 VNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV 291
Query: 357 VPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVK 413
P+ T+ SL+S +C R+S +L+ + ++ ++V +NAL+ F K G +A K
Sbjct: 292 RPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEK 351
Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
LY+ M+ + PD +++ L+ G C ++DEA ++++ ++ + N + +++
Sbjct: 352 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFC 411
Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
+A R + ++LFR + V+YT I G + + A +++ QM V PN
Sbjct: 412 KAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIM 471
Query: 534 TYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVE- 592
TY +L CK N K+ K A + +Y ++ I+ + N ++E
Sbjct: 472 TYNTLLDGLCK--NGKLEK--------AMVVFEYLQRSKMEPTIYTY-------NIMIEG 514
Query: 593 MCNLGLIPD 601
MC G + D
Sbjct: 515 MCKAGKVED 523
Score = 173 bits (438), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 117/485 (24%), Positives = 232/485 (47%), Gaps = 14/485 (2%)
Query: 85 SFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDE 144
F+ ++S + ++ +F+ V + ++ R+G T+ + + + R + L +
Sbjct: 87 EFNKLLSAIAKMK-KFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGK 145
Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET----QLPNFLSFNIALCNLCKLND 200
M + G+ P+ + +++ R+ + ++ + P+ ++F + L N
Sbjct: 146 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205
Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
S ++ MV++G PN+ + +++N CK G I A+ LL M +V ++
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYST 265
Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL-DMLESE 319
+ID + R D A L+ +M G PNV+TY+SLI + +S A L DM+E +
Sbjct: 266 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERK 325
Query: 320 GHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLL 379
+ P++V N LID K G +A +YD +++ + PD +T+ SL++ C+ R
Sbjct: 326 IN-PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 384
Query: 380 P---KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
+L+ + ++V YN L++ FCKA ++ V+L+ M +G + ++ L+ G
Sbjct: 385 KHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHG 444
Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
AR D A V++ +V + N + ++D L + G+ KA+ +F K
Sbjct: 445 FFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 504
Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC----KERNIKMVK 552
+ +Y + I G+ + G+ E+ + L+ + V P+ Y M+ FC KE + +
Sbjct: 505 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFR 564
Query: 553 RLLQD 557
++ +D
Sbjct: 565 KMRED 569
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 192/428 (44%), Gaps = 32/428 (7%)
Query: 176 VLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGR 235
++K LP+ FN L + K+ V + M R G N+ + IL+NCFC+ +
Sbjct: 76 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 135
Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
I+ A LLG M+ LG S+ + L++G+ +R+ A L ++MV+ G P+ +T+T+
Sbjct: 136 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 195
Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
LI G S A + +D + G P+LV + V+++ L K G D A
Sbjct: 196 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA----------- 244
Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLY 415
F+LL K+ ++EA++V+Y+ ++ CK + A+ L+
Sbjct: 245 --------------------FNLLNKMEAA-KIEANVVIYSTVIDSLCKYRHEDDALNLF 283
Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
M +KG P+ ++ L+ LC + +A + ++ N A++D ++
Sbjct: 284 TEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKE 343
Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
G+ +A +L+ I D+ +Y+ I G R +EA ++ M PN TY
Sbjct: 344 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 403
Query: 536 RVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCN 595
++ FCK + I L +++ + + T L F+ +A +M +
Sbjct: 404 NTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 463
Query: 596 LGLIPDEM 603
G+ P+ M
Sbjct: 464 DGVHPNIM 471
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 148/297 (49%), Gaps = 7/297 (2%)
Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK---ETQL-PNFLSFNIALC 193
L F EM G PN + ++ L R ++L E ++ PN ++FN +
Sbjct: 279 ALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALID 338
Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
K + + + M+++ P++ + L+N FC R+ EA + LMI+
Sbjct: 339 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 398
Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
+V + LI+GF + +R+D L+ +M Q G N VTYT+LI GF +A+ A
Sbjct: 399 NVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 458
Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
+ S+G P+++ +N L+D L K G + A+ V++ L K+ P YT+ ++ +C +
Sbjct: 459 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 518
Query: 374 GRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
G+ L C L V+ D+++YN ++S FC+ G +A L+ M + G PD+
Sbjct: 519 GKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDS 575
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 111/251 (44%), Gaps = 39/251 (15%)
Query: 151 TPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKD 206
PN N ++D K G++ L +++K + P+ +++ + C + + K
Sbjct: 327 NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 386
Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
+ +M+ K +PNV + L+N FCK RI E +L M G + +T LI GF
Sbjct: 387 MFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFF 446
Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF----------------MEAKMFSIAF 310
+ R D A ++++MV +G PN++TY +L+ G +KM +
Sbjct: 447 QARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 506
Query: 311 SFLDMLES-------------------EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGL 351
++ M+E +G PD++ +N +I + G ++A ++ +
Sbjct: 507 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKM 566
Query: 352 LELKLVPDSYT 362
E +PDS T
Sbjct: 567 REDGPLPDSGT 577
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/439 (25%), Positives = 222/439 (50%), Gaps = 7/439 (1%)
Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALC 193
++ F +M + P+ N ++ + K+ + +L I + ++ Q + +++I +
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
C+ + +S V+ M++ G+ P++ LLN +C RI++A L+ M+ +G
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
+T LI G + A L ++MVQ GC P++VTY +++ G + +A S L
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLL 246
Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
+E D+V +N +ID L K DDAL+++ + + PD +T+ SL+S +C
Sbjct: 247 KKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 306
Query: 374 GRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
GR+S +L+ + ++ ++V ++AL+ F K G +A KLY+ M+ + PD +++
Sbjct: 307 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 366
Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
L+ G C ++DEA ++++ ++ + N ++ ++ +A R + ++LFR
Sbjct: 367 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQ 426
Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
+ V+YT I G + + A +++ QM + V PN TY ++L CK +
Sbjct: 427 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAK 486
Query: 551 VKRLLQDVIDARIELDYHT 569
+ + + + +E D +T
Sbjct: 487 AMVVFEYLQRSTMEPDIYT 505
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 198/412 (48%), Gaps = 8/412 (1%)
Query: 197 KLNDVSNVKDVI---GMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
+L+D+ V D + G MV+ +P++ F LL+ KM + L M TLG S
Sbjct: 57 RLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISH 116
Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
+ +++ I+ F R +L +A + KM++ G P++VT +SL+ G+ +K S A + +
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
D + G+ PD LI L +A+ + D +++ PD T+ ++++ +C
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 374 GR----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
G SLL K+ G ++EAD+V+YN ++ CK + A+ L+ M +KG PD ++
Sbjct: 237 GDIDLALSLLKKMEKG-KIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFT 295
Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
+ L+ LC + +A + ++ N +A++D ++ G+ +A +L+ I
Sbjct: 296 YSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 355
Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
D+ +Y+ I G R +EA ++ M PN TY ++ FCK + ++
Sbjct: 356 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVE 415
Query: 550 MVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
L +++ + + T L F+ +A +M ++G+ P+
Sbjct: 416 EGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 467
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 122/549 (22%), Positives = 242/549 (44%), Gaps = 50/549 (9%)
Query: 57 LLNCPSDLI----ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELAR 112
L N SD+I A+ F K R F + F+ ++S V ++ +FE V + ++
Sbjct: 54 LRNRLSDIIKVDDAVDLFGDMVKSRP-FPSIVEFNKLLSAVAKMN-KFELVISLGEQMQT 111
Query: 113 VGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDL 172
+G T+ +F+ + R + L +M + G+ P+ + +++ R+
Sbjct: 112 LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171
Query: 173 GIKVLKET----QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLN 228
+ ++ + P+ +F + L N S ++ MV++G P++ + ++N
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 229 CFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSP 288
CK G I A LL M V + +IDG + + +D A L+ +M G P
Sbjct: 232 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRP 291
Query: 289 NVVTYTSLIKGFMEAKMFSIAFSFL-DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
+V TY+SLI +S A L DM+E + + P++V + LID K G +A +
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIERKIN-PNVVTFSALIDAFVKEGKLVEAEKL 350
Query: 348 YDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP---KLVCGLEVEADLVVYNALLSYFCK 404
YD +++ + PD +T+ SL++ C+ R +L+ + ++V Y+ L+ FCK
Sbjct: 351 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK 410
Query: 405 AGFPNQAVKLYNTMLDKGFT-----------------------------------PDNYS 429
A + ++L+ M +G P+ +
Sbjct: 411 AKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 470
Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
+ LL GLC K+ +A+ V++ + + + + + +++ + +AG+ +LF
Sbjct: 471 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS 530
Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
++ +V++Y I G G EEA L +MK PN+ TY ++ + ++ + +
Sbjct: 531 LKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDRE 590
Query: 550 MVKRLLQDV 558
L++++
Sbjct: 591 ASAELIKEM 599
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 119/278 (42%), Gaps = 38/278 (13%)
Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---V 383
+ +L + LS + DDA+D++ +++ + P F LLS V +F L+ L +
Sbjct: 50 YREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM 109
Query: 384 CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
L + DL Y+ ++ FC+ + A+ + M+ G+ PD + LL G C +++I
Sbjct: 110 QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRI 169
Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
+A+ A+VD+++E G Y D ++T
Sbjct: 170 SDAV-------------------ALVDQMVEMG----------------YKPDTFTFTTL 194
Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
I GL + EA L QM P+ TY ++ CK +I + LL+ + +I
Sbjct: 195 IHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKI 254
Query: 564 ELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
E D + + K+ A+N EM N G+ PD
Sbjct: 255 EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 292
Score = 76.6 bits (187), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 4/214 (1%)
Query: 115 CVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI 174
C T+ ++ + + + +E F EM + G NT ++ F+ D
Sbjct: 394 CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 453
Query: 175 KVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCF 230
V K+ PN L++NI L LCK ++ V + R P++ + I++
Sbjct: 454 MVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 513
Query: 231 CKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNV 290
CK G++ + ++L + G S +V A+ +I GF R + A L +KM ++G PN
Sbjct: 514 CKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNS 573
Query: 291 VTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
TY +LI+ + + + + S G A D
Sbjct: 574 GTYNTLIRARLRDGDREASAELIKEMRSCGFAGD 607
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 103/229 (44%), Gaps = 5/229 (2%)
Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDV 207
PN + ++ K RV+ G+++ +E + N +++ + + D N + V
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 455
Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
MV G +PN+ + ILL+ CK G++A+A + + + + ++I+G +
Sbjct: 456 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 515
Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
+++ L+ + G SPNV+ Y ++I GF A S L ++ +G P+
Sbjct: 516 AGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGT 575
Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
+N LI + G + + ++ + D+ T L++ + GR
Sbjct: 576 YNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNMLHDGRL 623
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 223/455 (49%), Gaps = 15/455 (3%)
Query: 127 RIYWRGEMYGMVLEAFDEMGRFGFT------PNTFARNIVMDVLFKIGRVD----LGIKV 176
R R ++ M L+ D +G FG P+ N ++ + K+ + D LG K+
Sbjct: 54 REILRNGLHDMKLD--DAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKM 111
Query: 177 LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
+ + ++NI + C+ + +S ++G M++ G+ P++ LLN +C RI
Sbjct: 112 QRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171
Query: 237 AEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSL 296
++A L+ M+ +G +T LI G + A L ++MVQ GC PN+VTY +
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231
Query: 297 IKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
+ G + +A + L+ +E+ D+V N +ID L K DDAL+++ + +
Sbjct: 232 VNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 291
Query: 357 VPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVK 413
P+ T+ SL+S +C GR+S +L+ + ++ +LV +NAL+ F K G +A K
Sbjct: 292 RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK 351
Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
LY+ M+ + PD +++ L+ G C ++D+A +++ +V + + + ++
Sbjct: 352 LYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFC 411
Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
++ R +LFR D V+YT I+GL G + A ++ QM VPP+
Sbjct: 412 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 471
Query: 534 TYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
TY ++L C ++ + + + I+LD +
Sbjct: 472 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 506
Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 121/499 (24%), Positives = 233/499 (46%), Gaps = 11/499 (2%)
Query: 66 ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
A+ F K R + F+ ++S + ++ +F+ V + ++ R+ V T+ +
Sbjct: 69 AIGLFGGMVKSRP-LPSIVEFNKLLSAIAKMK-KFDVVISLGEKMQRLEIVHGLYTYNIL 126
Query: 126 LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET----Q 181
+ + R + L +M + G+ P+ + +++ R+ + ++ +
Sbjct: 127 INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 186
Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
P+ ++F + L N S ++ MV++G PN+ + +++N CK G A
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALN 246
Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
LL M V + +ID + R +D A L+++M G PNVVTY+SLI
Sbjct: 247 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 306
Query: 302 EAKMFSIAFSFL-DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
+S A L DM+E + + P+LV N LID K G + +A +YD +++ + PD
Sbjct: 307 SYGRWSDASQLLSDMIEKKIN-PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365
Query: 361 YTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
+T+ SL++ C+ R ++ + + D+V YN L+ FCK+ +L+
Sbjct: 366 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE 425
Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
M +G D ++ L++GL D A V++ +V + + ++ ++D L G+
Sbjct: 426 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 485
Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
KA+++F + LD+ YT I G+ + G+ ++ + L+ + V PN TY
Sbjct: 486 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 545
Query: 538 MLLSFCKERNIKMVKRLLQ 556
M+ C +R ++ LL+
Sbjct: 546 MISGLCSKRLLQEAYALLK 564
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/428 (23%), Positives = 190/428 (44%), Gaps = 32/428 (7%)
Query: 176 VLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGR 235
++K LP+ + FN L + K+ V + M R + + IL+NCFC+ +
Sbjct: 76 MVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQ 135
Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
I+ A LLG M+ LG S+ + L++G+ +R+ A L ++MV+ G P+ +T+T+
Sbjct: 136 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 195
Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
LI G S A + +D + G P+LV + V+++ L K G D AL++ + + K
Sbjct: 196 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAK 255
Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLY 415
+EAD+V++N ++ CK + A+ L+
Sbjct: 256 --------------------------------IEADVVIFNTIIDSLCKYRHVDDALNLF 283
Query: 416 NTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEA 475
M KG P+ ++ L+ LC + +A + ++ N A++D ++
Sbjct: 284 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 343
Query: 476 GRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTY 535
G+ +A +L+ I D+ +Y + G R ++A ++ M P+ TY
Sbjct: 344 GKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTY 403
Query: 536 RVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCN 595
++ FCK + ++ L +++ + D T L + +F +A +M +
Sbjct: 404 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 463
Query: 596 LGLIPDEM 603
G+ PD M
Sbjct: 464 DGVPPDIM 471
Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 144/306 (47%), Gaps = 7/306 (2%)
Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK---ETQL-PNFLSFNIALC 193
L F EM G PN + ++ L GR ++L E ++ PN ++FN +
Sbjct: 279 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 338
Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
K + + M+++ P++ + L+N FC R+ +A Q+ M++
Sbjct: 339 AFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFP 398
Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
V + LI GF + +R++ L+ +M G + VTYT+LI+G A
Sbjct: 399 DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 458
Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
+ S+G PD++ +++L+D L G + AL+V+D + + ++ D Y + +++ +C +
Sbjct: 459 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 518
Query: 374 GRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
G+ L C L V+ ++V YN ++S C +A L M + G P++ ++
Sbjct: 519 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTY 578
Query: 431 VGLLRG 436
L+R
Sbjct: 579 NTLIRA 584
Score = 112 bits (281), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 168/381 (44%), Gaps = 4/381 (1%)
Query: 224 EILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQ 283
EIL N M ++ +A L G M+ S+ + L+ ++++ D+ L EKM +
Sbjct: 55 EILRNGLHDM-KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQR 113
Query: 284 NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
+ TY LI F S+A + L + G+ P +V + L++ D
Sbjct: 114 LEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISD 173
Query: 344 ALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLS 400
A+ + D ++E+ PD+ TF +L+ + L + S LV + + +LV Y +++
Sbjct: 174 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN 233
Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
CK G + A+ L N M D F ++ LC R +D+A+N+++ +
Sbjct: 234 GLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP 293
Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
N +++++ L GR A QL I +K ++V++ I ++ G+ EA LY
Sbjct: 294 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLY 353
Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKF 580
M ++ P+ +TY ++ FC + K++ + ++ D T L K K
Sbjct: 354 DDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKS 413
Query: 581 HSSSSAVNQLVEMCNLGLIPD 601
EM + GL+ D
Sbjct: 414 KRVEDGTELFREMSHRGLVGD 434
Score = 34.3 bits (77), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 33/181 (18%), Positives = 71/181 (39%)
Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
+ F+ + + +LR K+D+AI ++ G+V + P + ++ + + +
Sbjct: 44 RAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDV 103
Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
I L + + + +Y + I + A L +M + P+ T +L
Sbjct: 104 VISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 163
Query: 541 SFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
+C + I L+ +++ D T L +F + +S AV + M G P
Sbjct: 164 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 223
Query: 601 D 601
+
Sbjct: 224 N 224
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 180 bits (456), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 111/439 (25%), Positives = 221/439 (50%), Gaps = 7/439 (1%)
Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALC 193
++ F EM + P+ + ++ + K+ + DL I ++ ++ N ++NI +
Sbjct: 49 AVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMIN 108
Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
LC+ + +S ++G M++ G+ P++ LLN FC RI+EA L+ M+ +G
Sbjct: 109 CLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP 168
Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
+T L+ G + + A L E+MV GC P++VTY ++I G + +A + L
Sbjct: 169 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 228
Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
+ +E D+V ++ +ID L K DDAL+++ + + PD +T+ SL+S +C
Sbjct: 229 NKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 288
Query: 374 GRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
GR+S +L+ + ++ ++V +N+L+ F K G +A KL++ M+ + P+ ++
Sbjct: 289 GRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTY 348
Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
L+ G C ++DEA ++ +V + + + +++ +A + ++LFR
Sbjct: 349 NSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSR 408
Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
+ V+YT I G + + A +++ QM V PN TY +L CK ++
Sbjct: 409 RGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEK 468
Query: 551 VKRLLQDVIDARIELDYHT 569
+ + + +++E D +T
Sbjct: 469 AMVVFEYLQKSKMEPDIYT 487
Score = 153 bits (387), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 116/488 (23%), Positives = 220/488 (45%), Gaps = 11/488 (2%)
Query: 66 ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
A+ F K R F + F ++S + ++ +F+ V ++ +G T+ +
Sbjct: 49 AVDLFGEMVKSRP-FPSIVEFSKLLSAIAKMK-KFDLVISFGEKMEILGVSHNLYTYNIM 106
Query: 126 LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET----Q 181
+ R L +M + G+ P+ N +++ R+ + ++ +
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166
Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
P+ ++F + L + N S ++ MV KG P++ + ++N CK G A
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 226
Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
LL M V ++ +ID + R +D A L+ +M G P+V TY+SLI
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286
Query: 302 EAKMFSIAFSFL-DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
+S A L DMLE + + P++V N LID +K G +A ++D +++ + P+
Sbjct: 287 NYGRWSDASRLLSDMLERKIN-PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345
Query: 361 YTFCSLLSTVCLSGRFSLLPK---LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
T+ SL++ C+ R + L+ + D+V YN L++ FCKA ++L+
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRD 405
Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
M +G + ++ L+ G A D A V++ +V + N + ++D L + G+
Sbjct: 406 MSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 465
Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
KA+ +F K D+ +Y + G+ + G+ E+ + L+ + V P+ Y
Sbjct: 466 LEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNT 525
Query: 538 MLLSFCKE 545
M+ FCK+
Sbjct: 526 MISGFCKK 533
Score = 136 bits (342), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 152/306 (49%), Gaps = 7/306 (2%)
Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK---ETQL-PNFLSFNIALC 193
L F EM G P+ F + ++ L GR ++L E ++ PN ++FN +
Sbjct: 259 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLID 318
Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
K + + + M+++ PN+ + L+N FC R+ EA Q+ LM++
Sbjct: 319 AFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLP 378
Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
V + LI+GF + +++ L+ M + G N VTYT+LI GF +A A
Sbjct: 379 DVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVF 438
Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
+ S+G P+++ +N L+D L K G + A+ V++ L + K+ PD YT+ + +C +
Sbjct: 439 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKA 498
Query: 374 GRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
G+ L C L V+ D++ YN ++S FCK G +A L+ M + G PD+ ++
Sbjct: 499 GKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTY 558
Query: 431 VGLLRG 436
L+R
Sbjct: 559 NTLIRA 564
Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/427 (23%), Positives = 185/427 (43%), Gaps = 25/427 (5%)
Query: 103 VRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMD 162
V+G +L G VI + RGE + L ++M + + + V+D
Sbjct: 198 VKGCQPDLVTYGAVING--------LCKRGEP-DLALNLLNKMEKGKIEADVVIYSTVID 248
Query: 163 VLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYP 218
L K VD + + E P+ +++ + LC S+ ++ M+ + P
Sbjct: 249 SLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINP 308
Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
NV F L++ F K G++ EA +L MI ++ + LI+GF RLD A ++
Sbjct: 309 NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF 368
Query: 279 EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
MV C P+VVTY +LI GF +AK + G + V + LI +
Sbjct: 369 TLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQA 428
Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-------FSLLPKLVCGLEVEAD 391
D+A V+ ++ + P+ T+ +LL +C +G+ F L K ++E D
Sbjct: 429 SDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS----KMEPD 484
Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
+ YN + CKAG L+ ++ KG PD ++ ++ G C +EA ++
Sbjct: 485 IYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFI 544
Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
+ + P ++ + ++ + G + +L + ++ D +Y + + +L G
Sbjct: 545 KMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGL-VTDMLHDG 603
Query: 512 RTEEAYI 518
R ++ ++
Sbjct: 604 RLDKGFL 610
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 146/314 (46%), Gaps = 7/314 (2%)
Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
++ EA L G M+ S+ ++ L+ ++++ D+ EKM G S N+ TY
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
+I S A + L + G+ P +V N L++ +A+ + D ++E+
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 355 KLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEV---EADLVVYNALLSYFCKAGFPNQA 411
PD+ TF +L+ + + S LV + V + DLV Y A+++ CK G P+ A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 412 VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV--HTAIV 469
+ L N M D + ++ LC R +D+A+N++ M+N + V +++++
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTE--MDNKGIRPDVFTYSSLI 282
Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
L GR A +L + K +VV++ I + G+ EA L+ +M ++
Sbjct: 283 SCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 342
Query: 530 PNAYTYRVMLLSFC 543
PN TY ++ FC
Sbjct: 343 PNIVTYNSLINGFC 356
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 146/313 (46%), Gaps = 11/313 (3%)
Query: 263 DGFR-RLRR-------LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
DG+R +L R LD A L+ +MV++ P++V ++ L+ + K F + SF +
Sbjct: 30 DGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGE 89
Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
+E G + +L +N++I+CL + AL + +++L P T SLL+ C
Sbjct: 90 KMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGN 149
Query: 375 RFSLLPKLV---CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
R S LV + + D V + L+ + ++AV L M+ KG PD ++
Sbjct: 150 RISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYG 209
Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
++ GLC + D A+N+ + + +++ ++D L + A+ LF +
Sbjct: 210 AVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNK 269
Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
DV +Y+ I L GR +A L S M + PN T+ ++ +F KE +
Sbjct: 270 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEA 329
Query: 552 KRLLQDVIDARIE 564
++L ++I I+
Sbjct: 330 EKLFDEMIQRSID 342
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 116/263 (44%), Gaps = 3/263 (1%)
Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNAL 398
D+A+D++ +++ + P F LLS + +F L+ +E V +L YN +
Sbjct: 47 DEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIM 106
Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
++ C+ + A+ + M+ G+ P + LL G C +I EA+ + +V
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166
Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
+ T +V L + + +A+ L R +V+ D+V+Y I GL + G + A
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 226
Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
L ++M+ + + Y ++ S CK R++ L ++ + I D T L +
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286
Query: 579 KFHSSSSAVNQLVEMCNLGLIPD 601
+ S A L +M + P+
Sbjct: 287 NYGRWSDASRLLSDMLERKINPN 309
Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 106/260 (40%), Gaps = 11/260 (4%)
Query: 99 RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
R + + I + C+ T+ + + + + +E F +M R G NT
Sbjct: 360 RLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYT 419
Query: 159 IVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
++ F+ D V K+ PN +++N L LCK + V + +
Sbjct: 420 TLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS 479
Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
P++ + I+ CK G++ + + L + G V A+ +I GF + + A
Sbjct: 480 KMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEA 539
Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
L+ KM ++G P+ TY +LI+ + + + + + S A D + ++ D
Sbjct: 540 YTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDM 599
Query: 335 LSKMGSYDDALDVYDGLLEL 354
L +D LD G LE+
Sbjct: 600 L-----HDGRLD--KGFLEV 612
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 179 bits (453), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 212/421 (50%), Gaps = 14/421 (3%)
Query: 143 DEMGRFGFT------PNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIAL 192
D +G FG P+ + ++ + K+ + DL I + ++ Q N +++I +
Sbjct: 58 DAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFI 117
Query: 193 CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
C+ + +S ++G M++ G+ P++ LLN FC RI+EA L+ M+ +G
Sbjct: 118 NYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 177
Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
+T L+ G + + A L E+MV GC P++VTY ++I G + +A +
Sbjct: 178 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 237
Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
L+ +E D+V +N +ID L K DDA D+++ + + PD +T+ L+S +C
Sbjct: 238 LNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCN 297
Query: 373 SGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTML-DKGFTPDNY 428
GR+S +L+ + + DLV +NAL+ F K G +A KLY+ M+ K PD
Sbjct: 298 YGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVV 357
Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
++ L++G C ++++E + V++ + N +T ++ +A C A +F++
Sbjct: 358 AYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 417
Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
+ + D+++Y + + GL G E A +++ M+ + + TY M+ + CK +
Sbjct: 418 VSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKV 477
Query: 549 K 549
+
Sbjct: 478 E 478
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/428 (21%), Positives = 189/428 (44%), Gaps = 9/428 (2%)
Query: 99 RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
R +V ++ +G TF + ++ + + M G P+
Sbjct: 160 RISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYG 219
Query: 159 IVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
V++ L K G DL + +L + + + + +N + LCK + + D+ M K
Sbjct: 220 AVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETK 279
Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
G P+V + L++C C GR ++A +LL M+ + + + LID F + +L A
Sbjct: 280 GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEA 339
Query: 275 GYLWEKMVQNG-CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
L+++MV++ C P+VV Y +LIKGF + K + G + V + LI
Sbjct: 340 EKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIH 399
Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEA 390
+ D+A V+ ++ + PD T+ LL +C +G ++ + + +++
Sbjct: 400 GFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKL 459
Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
D+V Y ++ CKAG L+ ++ KG P+ ++ ++ G C +EA ++
Sbjct: 460 DIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 519
Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
+ + P N+ + ++ + G + +L + + D ++ + + +L
Sbjct: 520 VEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGL-VTNMLHD 578
Query: 511 GRTEEAYI 518
GR +++++
Sbjct: 579 GRLDKSFL 586
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 126/259 (48%), Gaps = 6/259 (2%)
Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
F DM++S P +V + L+ ++KM +D + + + + L + + YT+ ++ C
Sbjct: 63 FGDMVKSRPF-PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFC 121
Query: 372 LSGRFSL----LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
+ SL L K++ L +V N+LL+ FC ++AV L + M++ G+ PD
Sbjct: 122 RRSQLSLALAILGKMM-KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDT 180
Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
+F L+ GL K EA+ + + +V+ + + A+++ L + G A+ L +
Sbjct: 181 VTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNK 240
Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN 547
K DVV Y I GL + ++A+ L+++M+ + P+ +TY ++ C
Sbjct: 241 MEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGR 300
Query: 548 IKMVKRLLQDVIDARIELD 566
RLL D+++ I D
Sbjct: 301 WSDASRLLSDMLEKNINPD 319
Score = 86.7 bits (213), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 136/328 (41%), Gaps = 32/328 (9%)
Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
++ +A L G M+ S+ ++ L+ ++ + D+ L E+M G S N+ TY+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
I F S+A + L + G+ P +V N L++ +A+ + D ++E+
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 355 KLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKL 414
PD+ TF +L+ + + S +AV L
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKAS--------------------------------EAVAL 202
Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
M+ KG PD ++ ++ GLC + D A+N+ + + ++ I+D L +
Sbjct: 203 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCK 262
Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
A LF + + DV +Y I L GR +A L S M + P+
Sbjct: 263 YKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVF 322
Query: 535 YRVMLLSFCKERNIKMVKRLLQDVIDAR 562
+ ++ +F KE + ++L +++ ++
Sbjct: 323 FNALIDAFVKEGKLVEAEKLYDEMVKSK 350
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 115/263 (43%), Gaps = 3/263 (1%)
Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL---LPKLVCGLEVEADLVVYNAL 398
DDA+ ++ +++ + P F LLS + +F L L + + L + +L Y+
Sbjct: 57 DDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIF 116
Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
++YFC+ + A+ + M+ G+ P + LL G C +I EA+ + +V
Sbjct: 117 INYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 176
Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
+ T +V L + + +A+ L R +V+ D+V+Y I GL + G + A
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 236
Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
L ++M+ + + Y ++ CK +++ L + I+ D T L +
Sbjct: 237 LLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLC 296
Query: 579 KFHSSSSAVNQLVEMCNLGLIPD 601
+ S A L +M + PD
Sbjct: 297 NYGRWSDASRLLSDMLEKNINPD 319
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 176 bits (446), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 212/425 (49%), Gaps = 7/425 (1%)
Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDV 207
P+ + ++ + K+ + DL I + ++ Q N +++I + C+ + +S V
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
+ M++ G+ P++ LLN FC RI++A L+G M+ +G + LI G R
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198
Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
R A L ++MV GC P++VTY ++ G + +A S L +E P +V
Sbjct: 199 HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVI 258
Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL- 386
+N +ID L + +DAL+++ + + P+ T+ SL+ +C GR+S +L+ +
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 318
Query: 387 --EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
++ ++V ++AL+ F K G +A KLY+ M+ + PD +++ L+ G C ++D
Sbjct: 319 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 378
Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
EA ++++ ++ + N + ++ +A R + ++LFR + V+YT I
Sbjct: 379 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLI 438
Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
G + + A I++ QM V P+ TY ++L C ++ + + + +++E
Sbjct: 439 HGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKME 498
Query: 565 LDYHT 569
D +T
Sbjct: 499 PDIYT 503
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 119/488 (24%), Positives = 229/488 (46%), Gaps = 11/488 (2%)
Query: 66 ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
A++ F K R F + F ++S + ++ +F+ V + ++ +G T+ +
Sbjct: 65 AVNLFGDMVKSRP-FPSIVEFSKLLSAIAKMN-KFDLVISLGEQMQNLGISHNLYTYSIL 122
Query: 126 LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET----Q 181
+ + R + L +M + G+ P+ N +++ R+ + ++ +
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
P+ +FN + L + N S ++ MV KG P++ + I++N CK G I A
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
LL M V + +ID + ++ A L+ +M G PNVVTY SLI+
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302
Query: 302 EAKMFSIAFSFL-DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
+S A L DM+E + + P++V + LID K G +A +YD +++ + PD
Sbjct: 303 NYGRWSDASRLLSDMIERKIN-PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361
Query: 361 YTFCSLLSTVCLSGRFSLLP---KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
+T+ SL++ C+ R +L+ + ++V YN L+ FCKA ++ ++L+
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421
Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
M +G + ++ L+ G AR+ D A V++ +V + + ++ ++D L G+
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK 481
Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
A+ +F K D+ +Y + I G+ + G+ E+ + L+ + V PN TY
Sbjct: 482 VETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 541
Query: 538 MLLSFCKE 545
M+ FC++
Sbjct: 542 MMSGFCRK 549
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 153/306 (50%), Gaps = 7/306 (2%)
Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK---ETQL-PNFLSFNIALC 193
L F EM G PN N ++ L GR ++L E ++ PN ++F+ +
Sbjct: 275 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 334
Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
K + + + M+++ P++ + L+N FC R+ EA + LMI+
Sbjct: 335 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 394
Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
+V + LI GF + +R+D L+ +M Q G N VTYT+LI GF +A+ A
Sbjct: 395 NVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVF 454
Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
+ S+G PD++ +++L+D L G + AL V++ L K+ PD YT+ ++ +C +
Sbjct: 455 KQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKA 514
Query: 374 GRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
G+ L C L V+ ++V Y ++S FC+ G +A L+ M ++G PD+ ++
Sbjct: 515 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTY 574
Query: 431 VGLLRG 436
L+R
Sbjct: 575 NTLIRA 580
Score = 116 bits (290), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 173/408 (42%), Gaps = 40/408 (9%)
Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
++ +A L G M+ S+ ++ L+ ++ + D+ L E+M G S N+ TY+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
LI F S+A + L + G+ PD+V N L++ DA+ + ++E+
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 355 KLVPDSYTFCSLL-----------------------------------STVCLSGR---- 375
PDS+TF +L+ + +C G
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 376 FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
SLL K+ G ++E +V+YN ++ C N A+ L+ M +KG P+ ++ L+R
Sbjct: 241 LSLLKKMEQG-KIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299
Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
LC + +A + ++ N +A++D ++ G+ +A +L+ I
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 359
Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
D+ +Y+ I G R +EA ++ M PN TY ++ FCK + + L
Sbjct: 360 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELF 419
Query: 556 QDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
+++ + + T L F+ +A +M + G++PD M
Sbjct: 420 REMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIM 467
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 221/444 (49%), Gaps = 13/444 (2%)
Query: 139 LEAFDEMGRFGFT------PNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSF 188
+E D +G FG P+ + ++ + K+ + DL I ++ ++ N ++
Sbjct: 57 IELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTY 116
Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
NI + C+ + +S ++G M++ G+ P++ LLN FC RI++A L+ M+
Sbjct: 117 NILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVE 176
Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
+G +T LI G + A L ++MVQ GC P++VTY +++ G + +
Sbjct: 177 MGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDL 236
Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
A + L+ +E+ ++V ++ +ID L K DDAL+++ + + P+ T+ SL+S
Sbjct: 237 ALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 296
Query: 369 TVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
+C GR+S +L+ + ++ +LV ++AL+ F K G +A KLY M+ + P
Sbjct: 297 CLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDP 356
Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
+ +++ L+ G C ++ EA + + ++ + N + +++ +A R K ++LF
Sbjct: 357 NIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELF 416
Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
R + V+YT I G + + A +++ QM + V PN TY ++L CK
Sbjct: 417 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 476
Query: 546 RNIKMVKRLLQDVIDARIELDYHT 569
+ + + + + +E D +T
Sbjct: 477 GKLAKAMVVFEYLQRSTMEPDIYT 500
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 182/398 (45%), Gaps = 3/398 (0%)
Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
+ G+M + +P++ F LL+ KM + M LG S ++ + +LI+ F
Sbjct: 65 LFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFC 124
Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
R RL +A L KM++ G P++VT SL+ GF S A + +D + G+ PD V
Sbjct: 125 RCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTV 184
Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL 386
LI L +A+ + D +++ PD T+ ++++ +C G L L+ +
Sbjct: 185 TFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKM 244
Query: 387 E---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
E +EA++V+Y+ ++ CK + A+ L+ M +KG P+ ++ L+ LC +
Sbjct: 245 EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRW 304
Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
+A + ++ N +A++D ++ G+ KA +L+ I ++ +Y+
Sbjct: 305 SDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSL 364
Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
I G R EA + M PN TY ++ FCK + + L +++ +
Sbjct: 365 INGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGL 424
Query: 564 ELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
+ T L F+ +A +M ++G+ P+
Sbjct: 425 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 462
Score = 112 bits (281), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 124/245 (50%), Gaps = 4/245 (1%)
Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK---ETQL-PNFLSFNIALC 193
L F EM G PN + ++ L GR ++L E ++ PN ++F+ +
Sbjct: 272 ALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALID 331
Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
K + + + M+++ PN+ + L+N FC + R+ EA Q+L LMI
Sbjct: 332 AFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLP 391
Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
+V + LI+GF + +R+D L+ +M Q G N VTYT+LI GF +A+ A
Sbjct: 392 NVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 451
Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
+ S G P+++ +N+L+D L K G A+ V++ L + PD YT+ ++ +C +
Sbjct: 452 KQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKA 511
Query: 374 GRFSL 378
G++ +
Sbjct: 512 GKWKM 516
Score = 33.1 bits (74), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 42/228 (18%), Positives = 78/228 (34%), Gaps = 35/228 (15%)
Query: 409 NQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAI 468
+ A+ L+ M P F LL + K D I+ + + + + N + + +
Sbjct: 60 DDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNIL 119
Query: 469 VDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAV 528
++ R A+ L + + Y D+V+ + G G R +A L QM +
Sbjct: 120 INCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGY 179
Query: 529 PPNA-----------------------------------YTYRVMLLSFCKERNIKMVKR 553
P+ TY ++ CK + +
Sbjct: 180 KPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALN 239
Query: 554 LLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
LL + A+IE + + + K+ A+N EM N G+ P+
Sbjct: 240 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 287
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 211/422 (50%), Gaps = 8/422 (1%)
Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
F EM +PN F NI++ G +D+ + + + + LPN +++N + CK
Sbjct: 193 FKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCK 252
Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
L + + ++ M KG PN+ + +++N C+ GR+ E +L M G SL
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT 312
Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
+ LI G+ + A + +M+++G +P+V+TYTSLI +A + A FLD +
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372
Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
G P+ + L+D S+ G ++A V + + P T+ +L++ C++G+
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 378 LLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
++ ++ + D+V Y+ +LS FC++ ++A+++ M++KG PD ++ L+
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
+G C R+ EA ++Y+ ++ + +TA+++ G KA+QL + +
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552
Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
DVV+Y+V I GL + RT EA L ++ + P+ TY L+ C K V L
Sbjct: 553 PDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHT-LIENCSNIEFKSVVSL 611
Query: 555 LQ 556
++
Sbjct: 612 IK 613
Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 204/412 (49%), Gaps = 10/412 (2%)
Query: 158 NIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIAL-CNLCKLNDVSNVKDVIGMMV 212
++V+ ++ +D + ++ Q +P LS+N L + ++S ++V M+
Sbjct: 138 DLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEML 197
Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
PNV + IL+ FC G I A L M T G +V + LIDG+ +LR++D
Sbjct: 198 ESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKID 257
Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGF-MEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
L M G PN+++Y +I G E +M ++F +M G++ D V +N L
Sbjct: 258 DGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEM-NRRGYSLDEVTYNTL 316
Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA- 390
I K G++ AL ++ +L L P T+ SL+ ++C +G + + + + V
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Query: 391 --DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
+ Y L+ F + G+ N+A ++ M D GF+P ++ L+ G C K+++AI
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIA 436
Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
V + + + + ++ ++ + +A+++ R + + D ++Y+ I+G
Sbjct: 437 VLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFC 496
Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
E RT+EA LY +M + +PP+ +TY ++ ++C E +++ +L ++++
Sbjct: 497 EQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE 548
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 187/390 (47%), Gaps = 4/390 (1%)
Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG-FRRLRRLDMAG 275
Y +F++++ + ++ I +A ++ L G V ++ ++D R R + A
Sbjct: 131 YSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAE 190
Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
++++M+++ SPNV TY LI+GF A +A + D +E++G P++V +N LID
Sbjct: 191 NVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGY 250
Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DL 392
K+ DD + + L P+ ++ +++ +C GR + ++ + D
Sbjct: 251 CKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDE 310
Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
V YN L+ +CK G +QA+ ++ ML G TP ++ L+ +C A ++ A+
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
+ + N +T +VD + G ++A ++ R + VV+Y I G G+
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430
Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
E+A + MK + P+ +Y +L FC+ ++ R+ +++++ I+ D T
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 573 LTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
L + + + A + EM +GL PDE
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDE 520
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 120/546 (21%), Positives = 215/546 (39%), Gaps = 101/546 (18%)
Query: 66 ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
ALS + A+ + V S++ ++ R + E+ T+ +
Sbjct: 153 ALSI-VHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNIL 211
Query: 126 LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL--- 182
+R + + L FD+M G PN N ++D K+ ++D G K+L+ L
Sbjct: 212 IRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGL 271
Query: 183 -PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF------------------------- 216
PN +S+N+ + LC+ + V V+ M R+G+
Sbjct: 272 EPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALV 331
Query: 217 ----------YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
P+V + L++ CK G + A + L M G + +T L+DGF
Sbjct: 332 MHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFS 391
Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
+ ++ A + +M NG SP+VVTY +LI G A + L+ ++ +G +PD+V
Sbjct: 392 QKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVV 451
Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL 386
++ ++ + D+AL V ++E + PD+ T+ SL+ C R K C L
Sbjct: 452 SYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRR----TKEACDL 507
Query: 387 EVE-------ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD------------- 426
E D Y AL++ +C G +A++L+N M++KG PD
Sbjct: 508 YEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK 567
Query: 427 ----------------------------------NYSF---VGLLRGLCGARKIDEAINV 449
N F V L++G C + EA V
Sbjct: 568 QSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQV 627
Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
++ ++ N + + ++ AG KA L++ + + L V+ ++ L +
Sbjct: 628 FESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHK 687
Query: 510 GGRTEE 515
G+ E
Sbjct: 688 EGKVNE 693
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 139/360 (38%), Gaps = 74/360 (20%)
Query: 96 LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRG-----EMYGMVLEAFD------- 143
LT T ++ + + G + +A FL +R+ RG Y +++ F
Sbjct: 341 LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRV--RGLCPNERTYTTLVDGFSQKGYMNE 398
Query: 144 ------EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL---KETQL-PNFLSFNIALC 193
EM GF+P+ N +++ G+++ I VL KE L P+ +S++ L
Sbjct: 399 AYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLS 458
Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
C+ DV V MV KG P+ + L+ FC+ R EA L M+ +G
Sbjct: 459 GFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPP 518
Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT------------------- 294
+T LI+ + L+ A L +MV+ G P+VVTY+
Sbjct: 519 DEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLL 578
Query: 295 -------------------------------SLIKGFMEAKMFSIAFSFLDMLESEGHAP 323
SLIKGF M + A + + + H P
Sbjct: 579 LKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKP 638
Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV 383
D +N++I + G A +Y +++ + + T +L+ + G+ + L ++
Sbjct: 639 DGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVI 698
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 172 bits (436), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 199/405 (49%), Gaps = 7/405 (1%)
Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF----LSFNIALCNLCK 197
D M GF PN V++V+ K G+ L +++L++ + N + ++I + LCK
Sbjct: 216 IDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
+ N ++ M KGF ++ + L+ FC GR + +LL MI S +V
Sbjct: 276 DGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVT 335
Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
++VLID F + +L A L ++M+Q G +PN +TY SLI GF + A +D++
Sbjct: 336 FSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMI 395
Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
S+G PD++ N+LI+ K DD L+++ + ++ ++ T+ +L+ C SG+
Sbjct: 396 SKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLE 455
Query: 378 LLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
+ KL + V D+V Y LL C G +A++++ + D ++ ++
Sbjct: 456 VAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIII 515
Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
G+C A K+D+A +++ + + ++A + ++ L KA LFR+ E +
Sbjct: 516 HGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHA 575
Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
D ++Y + IR L A L +MK P + T ++++
Sbjct: 576 PDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVI 620
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 130/569 (22%), Positives = 252/569 (44%), Gaps = 42/569 (7%)
Query: 45 PIILAPHIVHSTLLNCPSDLI-----ALSFF-----------------IWCAKQRDYFHD 82
P +L + L+NCP++L+ S F I D F D
Sbjct: 19 PRLLETGTLRIALINCPNELLFCCERGFSTFSDRNLSYRDKLSSGLVGIKADDAVDLFRD 78
Query: 83 -VQS--------FDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGE 133
+QS F+ + S + + T ++E V + ++ G T + + + R
Sbjct: 79 MIQSRPLPTVIDFNRLFSAIAK-TKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCR 137
Query: 134 MYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFN 189
++ + G+ P+T N +++ L RV +L ++++ P ++ N
Sbjct: 138 KLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLN 197
Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
+ LC VS+ +I MV GF PN + +LN CK G+ A A +LL M
Sbjct: 198 TLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEER 257
Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
L ++++IDG + LD A L+ +M G +++TY +LI GF A +
Sbjct: 258 NIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDG 317
Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
L + +P++V +VLID K G +A + +++ + P++ T+ SL+
Sbjct: 318 AKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDG 377
Query: 370 VCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
C R + L+ + D++ +N L++ +CKA + ++L+ M +G +
Sbjct: 378 FCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIAN 437
Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
++ L++G C + K++ A ++Q +V + + ++D L + G KA+++F
Sbjct: 438 TVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFG 497
Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
+ K LD+ Y + I G+ + ++A+ L+ + V +A Y +M+ C++
Sbjct: 498 KIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKD 557
Query: 547 NIKMVKRLLQDVID---ARIELDYHTSIR 572
++ L + + + A EL Y+ IR
Sbjct: 558 SLSKADILFRKMTEEGHAPDELTYNILIR 586
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 156/337 (46%), Gaps = 3/337 (0%)
Query: 270 RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHN 329
+ D A L+ M+Q+ P V+ + L + K + + + +ES+G A + +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV---CGL 386
++I+C + A +++L PD+ F +LL+ +CL R S +LV +
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
+ L+ N L++ C G + AV L + M++ GF P+ ++ +L +C + + A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
+ + + + N ++A ++ I+D L + G A LF ++ + D+++Y I G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
GR ++ L M + PN T+ V++ SF KE ++ +LL++++ I +
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367
Query: 567 YHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
T L K + A+ + M + G PD M
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIM 404
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 118/468 (25%), Positives = 226/468 (48%), Gaps = 25/468 (5%)
Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ---LP-NFLSFNIALCNLCK 197
F EM + P+ + ++ + K+ + D+ I + ++ Q +P N +++I + C+
Sbjct: 69 FGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCR 128
Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
+ + V+G M++ G+ PN+ LLN +C RI+EA L+ M G +
Sbjct: 129 RSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVT 188
Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
+ LI G + A L ++MV GC P++VTY ++ G + +AF+ L+ +E
Sbjct: 189 FNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME 248
Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
P ++ +N +ID L K DDAL+++ + + P+ T+ SL+S +C GR+S
Sbjct: 249 QGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWS 308
Query: 378 LLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
+L+ + ++ D+ ++AL+ F K G +A KLY+ M+ + P ++ L+
Sbjct: 309 DASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLI 368
Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
G C ++DEA +++ +V + + + ++ + R + +++FR
Sbjct: 369 NGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 428
Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
+ V+Y + I+GL + G + A ++ +M VPPN TY +L CK N K+ K
Sbjct: 429 GNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK--NGKLEK-- 484
Query: 555 LQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVE-MCNLGLIPD 601
A + +Y ++ I+ + N ++E MC G + D
Sbjct: 485 ------AMVVFEYLQRSKMEPTIYTY-------NIMIEGMCKAGKVED 519
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/513 (22%), Positives = 236/513 (46%), Gaps = 17/513 (3%)
Query: 49 APHIVHSTLL---NCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTG--RFETV 103
A VH +L+ N + + SFF W R F S+D+ + + +
Sbjct: 11 AKRFVHRSLVVRGNAATVSPSFSFF-W----RRAFSGKTSYDYREKLSRNGLSELKLDDA 65
Query: 104 RGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDV 163
+ GE+ + F L + + +V+ ++M G N + +I+++
Sbjct: 66 VALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINC 125
Query: 164 LFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPN 219
+ ++ L + K++K PN ++ + L C +S ++ M G+ PN
Sbjct: 126 FCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPN 185
Query: 220 VRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWE 279
F L++ + +EA L+ M+ G + + V+++G + D+A L
Sbjct: 186 TVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLN 245
Query: 280 KMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
KM Q P V+ Y ++I G + K A + +E++G P++V ++ LI CL G
Sbjct: 246 KMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYG 305
Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYN 396
+ DA + ++E K+ PD +TF +L+ G+ KL + ++ +V Y+
Sbjct: 306 RWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYS 365
Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
+L++ FC ++A +++ M+ K PD ++ L++G C ++++E + V++ +
Sbjct: 366 SLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR 425
Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
N + ++ L +AG C A ++F+ + + P ++++Y + GL + G+ E+A
Sbjct: 426 GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 485
Query: 517 YILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
+++ ++ + P YTY +M+ CK ++
Sbjct: 486 MVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518
Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 117/501 (23%), Positives = 232/501 (46%), Gaps = 11/501 (2%)
Query: 66 ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
A++ F K R F + F ++S + ++ +F+ V + ++ +G T+ +
Sbjct: 65 AVALFGEMVKSRP-FPSIIEFSKLLSAIAKMN-KFDVVISLGEQMQNLGIPHNHYTYSIL 122
Query: 126 LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL--- 182
+ + R + L +M + G+ PN + +++ R+ + ++ + +
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182
Query: 183 -PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
PN ++FN + L N S +I MV KG P++ + +++N CK G A+
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 242
Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
LL M V + +IDG + + +D A L+++M G PNVVTY+SLI
Sbjct: 243 LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302
Query: 302 EAKMFSIAFSFL-DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
+S A L DM+E + + PD+ + LID K G +A +YD +++ + P
Sbjct: 303 NYGRWSDASRLLSDMIERKIN-PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 361 YTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
T+ SL++ C+ R ++ + D+V YN L+ FCK + ++++
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421
Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
M +G + ++ L++GL A D A +++ +V + N + ++D L + G+
Sbjct: 422 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 481
Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
KA+ +F K + +Y + I G+ + G+ E+ + L+ + V P+ Y
Sbjct: 482 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNT 541
Query: 538 MLLSFCKERNIKMVKRLLQDV 558
M+ FC++ + + L +++
Sbjct: 542 MISGFCRKGSKEEADALFKEM 562
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 147/306 (48%), Gaps = 7/306 (2%)
Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK---ETQL-PNFLSFNIALC 193
L F EM G PN + ++ L GR ++L E ++ P+ +F+ +
Sbjct: 275 ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALID 334
Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
K + + + MV++ P++ + L+N FC R+ EA Q+ M++
Sbjct: 335 AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP 394
Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
V + LI GF + +R++ ++ +M Q G N VTY LI+G +A +A
Sbjct: 395 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 454
Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
+ S+G P+++ +N L+D L K G + A+ V++ L K+ P YT+ ++ +C +
Sbjct: 455 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 514
Query: 374 GRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
G+ L C L V+ D+V YN ++S FC+ G +A L+ M + G P++ +
Sbjct: 515 GKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCY 574
Query: 431 VGLLRG 436
L+R
Sbjct: 575 NTLIRA 580
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 167/393 (42%), Gaps = 32/393 (8%)
Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
+ G MV+ +P++ F LL+ KM + L M LG + +++LI+ F
Sbjct: 68 LFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFC 127
Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
R +L +A + KM++ G PN+VT +SL+ G+ +K S A + +D + G+ P+ V
Sbjct: 128 RRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTV 187
Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL 386
N LI L +A+ + D ++ PD
Sbjct: 188 TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPD--------------------------- 220
Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
LV Y +++ CK G + A L N M P + ++ GLC + +D+A
Sbjct: 221 -----LVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 275
Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
+N+++ + N +++++ L GR A +L I K DV +++ I
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 335
Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
++ G+ EA LY +M ++ P+ TY ++ FC + K++ + ++ D
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Query: 567 YHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLI 599
T L K K+ + EM GL+
Sbjct: 396 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 428
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 4/190 (2%)
Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCN 194
+E F EM + G NT NI++ LF+ G D+ ++ KE PN +++N L
Sbjct: 416 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 475
Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
LCK + V + R P + + I++ CK G++ + + L + G
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 535
Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
V A+ +I GF R + A L+++M ++G PN Y +LI+ + + +
Sbjct: 536 VVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIK 595
Query: 315 MLESEGHAPD 324
+ S G A D
Sbjct: 596 EMRSCGFAGD 605
Score = 76.3 bits (186), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 117/263 (44%), Gaps = 3/263 (1%)
Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL---LPKLVCGLEVEADLVVYNAL 398
DDA+ ++ +++ + P F LLS + +F + L + + L + + Y+ L
Sbjct: 63 DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122
Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
++ FC+ A+ + M+ G+ P+ + LL G C +++I EA+ + + +
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182
Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
N ++ L + +A+ L R + + D+V+Y V + GL + G T+ A+
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 242
Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
L ++M+ + P Y ++ CK +++ L +++ I + T L +
Sbjct: 243 LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302
Query: 579 KFHSSSSAVNQLVEMCNLGLIPD 601
+ S A L +M + PD
Sbjct: 303 NYGRWSDASRLLSDMIERKINPD 325
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 102/229 (44%), Gaps = 5/229 (2%)
Query: 152 PNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDV 207
P+ N ++ K RV+ G++V +E + N +++NI + L + D +++
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 453
Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
MV G PN+ + LL+ CK G++ +A + + ++ + ++I+G +
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 513
Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
+++ L+ + G P+VV Y ++I GF A + ++ +G P+
Sbjct: 514 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGC 573
Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
+N LI + G + + ++ + D+ T L++ + GR
Sbjct: 574 YNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNMLHDGRL 621
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 137/561 (24%), Positives = 250/561 (44%), Gaps = 49/561 (8%)
Query: 45 PIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVR 104
P + + V L + P + S+F A + H ++ ++M+ + R+ G+ E +
Sbjct: 80 PDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEAL-RVDGKLEEMA 138
Query: 105 GIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA---FDEMGRFGFTPNTFARNIVM 161
+ + + +IK T +L I+ + G + +A +M FGF N ++ N ++
Sbjct: 139 YVFDLMQKR--IIKRDTNT-YLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLI 195
Query: 162 DVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFY 217
+L K ++V + L P+ +++ + L K D+ +V ++ M G
Sbjct: 196 HLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLK 255
Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
PNV F I + + G+I EAY++L M G V +TVLID R+LD A +
Sbjct: 256 PNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEV 315
Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
+EKM P+ VTY +L+ F + + F +E +GH PD+V +L+D L K
Sbjct: 316 FEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCK 375
Query: 338 MGSYDDALDVYDGLLELKLVPDSYTF----CSLLSTVCLSGRFSLLPKL----------- 382
G++ +A D D + + ++P+ +T+ C LL L L +
Sbjct: 376 AGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYT 435
Query: 383 --------------VCGLE---------VEADLVVYNALLSYFCKAGFPNQAVKLYNTML 419
V LE + ++V NA L KAG +A +++ +
Sbjct: 436 YIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLK 495
Query: 420 DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCH 479
D G PD+ ++ +++ +IDEAI + ++ N + V ++++ L +A R
Sbjct: 496 DIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVD 555
Query: 480 KAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
+A ++F R K VV+Y + GL + G+ +EA L+ M PPN T+ +
Sbjct: 556 EAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLF 615
Query: 540 LSFCKERNIKMVKRLLQDVID 560
CK + + ++L ++D
Sbjct: 616 DCLCKNDEVTLALKMLFKMMD 636
Score = 123 bits (308), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 117/516 (22%), Positives = 215/516 (41%), Gaps = 12/516 (2%)
Query: 97 TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
GR + I L +G V + T+ + ++ Y + ++ EM G P+
Sbjct: 481 AGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIV 540
Query: 157 RNIVMDVLFKIGRVDLGIKV---LKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
N +++ L+K RVD K+ +KE +L P +++N L L K + ++ MV
Sbjct: 541 VNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMV 600
Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
+KG PN F L +C CK + A ++L M+ +G V + +I G + ++
Sbjct: 601 QKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVK 660
Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL-DMLESEGHAPDLVFHNVL 331
A + +M + P+ VT +L+ G ++A + A+ + + L + P +F L
Sbjct: 661 EAMCFFHQM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDL 719
Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYT-FCSLLSTVC----LSGRFSLLPKLVCGL 386
I + D+A+ + L+ + D + ++ C +SG +L K L
Sbjct: 720 IGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDL 779
Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
V+ L YN L+ +A A ++ + G PD ++ LL + KIDE
Sbjct: 780 GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDEL 839
Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK-YPLDVVSYTVAIR 505
+Y+ + + N H ++ L++AG A+ L+ + ++ + +Y I
Sbjct: 840 FELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLID 899
Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
GL + GR EA L+ M PN Y +++ F K L + ++ +
Sbjct: 900 GLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRP 959
Query: 566 DYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
D T L + ++ E+ GL PD
Sbjct: 960 DLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPD 995
Score = 113 bits (283), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 112/479 (23%), Positives = 193/479 (40%), Gaps = 48/479 (10%)
Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALC 193
+E F+ M + G PNT N + D L K V L +K+L + +P+ ++N +
Sbjct: 592 AIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIF 651
Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
L K V M +K YP+ LL K I +AY+++ +
Sbjct: 652 GLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQ 710
Query: 254 SVNA-WTVLIDGFRRLRRLDMAGYLWEKMVQNG--------------------------- 285
N W LI +D A E++V NG
Sbjct: 711 PANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGART 770
Query: 286 ----------CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
P + TY LI G +EA M IA ++S G PD+ +N L+D
Sbjct: 771 LFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAY 830
Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEAD 391
K G D+ ++Y + + ++ T ++S + +G L L+ +
Sbjct: 831 GKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPT 890
Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
Y L+ K+G +A +L+ MLD G P+ + L+ G A + D A +++
Sbjct: 891 ACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFK 950
Query: 452 GIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGG 511
+V + ++ +VD L GR + + F+ DVV Y + I GL +
Sbjct: 951 RMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSH 1010
Query: 512 RTEEAYILYSQMK-HIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
R EEA +L+++MK + P+ YTY ++L+ ++ ++ ++ A +E + T
Sbjct: 1011 RLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFT 1069
Score = 112 bits (281), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 129/571 (22%), Positives = 231/571 (40%), Gaps = 75/571 (13%)
Query: 49 APHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLT--GRF------ 100
P +V T+L D + + + CAK+ F +++ H VT +T RF
Sbjct: 290 GPDVVTYTVL---IDALCTARKLDCAKE--VFEKMKTGRHKPDRVTYITLLDRFSDNRDL 344
Query: 101 ETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIV 160
++V+ E+ + G V TF + + + +G + D M G PN N +
Sbjct: 345 DSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTL 404
Query: 161 MDVLFKIGRVD-----------LGIKVLKETQL--------------------------- 182
+ L ++ R+D LG+K T +
Sbjct: 405 ICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGI 464
Query: 183 -PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
PN ++ N +L +L K K + + G P+ + +++ C+ K+G I EA +
Sbjct: 465 APNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIK 524
Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
LL M+ G V LI+ + R+D A ++ +M + P VVTY +L+ G
Sbjct: 525 LLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLG 584
Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
+ A + + +G P+ + N L DCL K AL + ++++ VPD +
Sbjct: 585 KNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVF 644
Query: 362 TFCSLLSTVCLSGR-------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVK- 413
T+ +++ + +G+ F + KL V D V LL KA A K
Sbjct: 645 TYNTIIFGLVKNGQVKEAMCFFHQMKKL-----VYPDFVTLCTLLPGVVKASLIEDAYKI 699
Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
+ N + + P N + L+ + ID A++ + +V N + +I+ +I
Sbjct: 700 ITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGD---SILVPII 756
Query: 474 EAGRCHKAIQLFRRAIVEKYPLD------VVSYTVAIRGLLEGGRTEEAYILYSQMKHIA 527
H + R + EK+ D + +Y + I GLLE E A ++ Q+K
Sbjct: 757 RYSCKHNNVS-GARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTG 815
Query: 528 VPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
P+ TY +L ++ K I + L +++
Sbjct: 816 CIPDVATYNFLLDAYGKSGKIDELFELYKEM 846
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 153/368 (41%), Gaps = 44/368 (11%)
Query: 113 VGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDL 172
+G K T+ L + +M + + F ++ G P+ N ++D K G++D
Sbjct: 779 LGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDE 838
Query: 173 GIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVI-GMMVRKGFYPNVRMFEILL 227
++ KE N ++ NI + L K +V + D+ +M + F P
Sbjct: 839 LFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTA------- 891
Query: 228 NCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCS 287
C G LIDG + RL A L+E M+ GC
Sbjct: 892 ---CTYGP-------------------------LIDGLSKSGRLYEAKQLFEGMLDYGCR 923
Query: 288 PNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDV 347
PN Y LI GF +A A + + EG PDL ++VL+DCL +G D+ L
Sbjct: 924 PNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHY 983
Query: 348 YDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLVCGLEVEADLVVYNALLSYFC 403
+ L E L PD + +++ + S R L ++ + DL YN+L+
Sbjct: 984 FKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLG 1043
Query: 404 KAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAH 463
AG +A K+YN + G P+ ++F L+RG + K + A VYQ +V + N
Sbjct: 1044 IAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTG 1103
Query: 464 VHTAIVDR 471
+ + +R
Sbjct: 1104 TYEQLPNR 1111
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/492 (20%), Positives = 207/492 (42%), Gaps = 46/492 (9%)
Query: 97 TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
G+ + + + + GC TF + + + L+ +M G P+ F
Sbjct: 586 NGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFT 645
Query: 157 RNIVMDVLFKIGRVDLGI---KVLKETQLPNFLSFNIALCNLCKLNDVSNV--------- 204
N ++ L K G+V + +K+ P+F++ L + K + + +
Sbjct: 646 YNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLY 705
Query: 205 -----------KDVIGMMVRKGFYPNVRMFE--ILLNCFCKMG---------------RI 236
+D+IG ++ + N F ++ N C+ G +
Sbjct: 706 NCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNV 765
Query: 237 AEAYQLL-GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
+ A L LG + + +LI G +++A ++ ++ GC P+V TY
Sbjct: 766 SGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNF 825
Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVY-DGLLEL 354
L+ + ++ F + + + + HN++I L K G+ DDALD+Y D + +
Sbjct: 826 LLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDR 885
Query: 355 KLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQA 411
P + T+ L+ + SGR +L G+ + +YN L++ F KAG + A
Sbjct: 886 DFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAA 945
Query: 412 VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
L+ M+ +G PD ++ L+ LC ++DE ++ ++ + + + + I++
Sbjct: 946 CALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIING 1005
Query: 472 LIEAGRCHKAIQLFRRAIVEK-YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
L ++ R +A+ LF + D+ +Y I L G EEA +Y++++ + P
Sbjct: 1006 LGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEP 1065
Query: 531 NAYTYRVMLLSF 542
N +T+ ++ +
Sbjct: 1066 NVFTFNALIRGY 1077
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 161/383 (42%), Gaps = 55/383 (14%)
Query: 163 VLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
LF+ DLG++ P ++N+ + L + + + +DV + G P+V
Sbjct: 770 TLFEKFTKDLGVQ-------PKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVAT 822
Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW-EKM 281
+ LL+ + K G+I E ++L M T + ++I G + +D A L+ + M
Sbjct: 823 YNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLM 882
Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
SP TY LI G ++ A + + G P+ +N+LI+ K G
Sbjct: 883 SDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEA 942
Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR-------FSLLPKLVCGLEVEADLVV 394
D A ++ +++ + PD T+ L+ +C+ GR F L + GL D+V
Sbjct: 943 DAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKE--SGLN--PDVVC 998
Query: 395 YNALLSYFCKAGFPNQAVKLYNTM-LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
YN +++ K+ +A+ L+N M +G TPD Y++ L+ L A ++EA +Y I
Sbjct: 999 YNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEI 1058
Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
+RA +E +V ++ IRG G+
Sbjct: 1059 --------------------------------QRAGLEP---NVFTFNALIRGYSLSGKP 1083
Query: 514 EEAYILYSQMKHIAVPPNAYTYR 536
E AY +Y M PN TY
Sbjct: 1084 EHAYAVYQTMVTGGFSPNTGTYE 1106
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 169 bits (428), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 107/439 (24%), Positives = 216/439 (49%), Gaps = 7/439 (1%)
Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALC 193
++ F EM + P+ N ++ + K+ + DL I + + Q + S+NI +
Sbjct: 64 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILIN 123
Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
C+ + + V+G M++ G+ P++ LLN +C RI+EA L+ M +
Sbjct: 124 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQP 183
Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
+ + LI G + A L ++MV GC P++ TY +++ G + +A S L
Sbjct: 184 NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 243
Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
+E D+V + +ID L + +DAL+++ + + P+ T+ SL+ +C
Sbjct: 244 KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 303
Query: 374 GRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
GR+S +L+ + ++ ++V ++AL+ F K G +A KLY+ M+ + PD +++
Sbjct: 304 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 363
Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
L+ G C ++DEA ++++ ++ + N + ++ +A R + ++LFR
Sbjct: 364 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ 423
Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
+ V+Y I+GL + G + A ++ +M VPP+ TY ++L CK ++
Sbjct: 424 RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEK 483
Query: 551 VKRLLQDVIDARIELDYHT 569
+ + + +++E D +T
Sbjct: 484 ALVVFEYLQKSKMEPDIYT 502
Score = 156 bits (395), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 111/471 (23%), Positives = 222/471 (47%), Gaps = 10/471 (2%)
Query: 83 VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAF 142
+ F+ ++S + ++ +F+ V + + + ++ + + + R + L
Sbjct: 80 IVEFNKLLSAIAKMN-KFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVL 138
Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKL 198
+M + G+ P+ + +++ R+ + ++ + + PN ++FN + L
Sbjct: 139 GKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLH 198
Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
N S +I MV +G P++ + ++N CK G I A LL M V +
Sbjct: 199 NKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 258
Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL-DMLE 317
T +ID + ++ A L+ +M G PNVVTY SLI+ +S A L DM+E
Sbjct: 259 TTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 318
Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
+ + P++V + LID K G +A +YD +++ + PD +T+ SL++ C+ R
Sbjct: 319 RKIN-PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 378 LLP---KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
+L+ + ++V YN L+ FCKA + ++L+ M +G + ++ L+
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437
Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
+GL A D A +++ +V + + ++ ++D L + G+ KA+ +F K
Sbjct: 438 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 497
Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
D+ +Y + I G+ + G+ E+ + L+ + V PN Y M+ FC++
Sbjct: 498 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 548
Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/404 (25%), Positives = 185/404 (45%), Gaps = 42/404 (10%)
Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK-------ETQLPNFLSFNIALCNL 195
D M G P+ F V++ L K G +DL + +LK E + + + ALCN
Sbjct: 209 DRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNY 268
Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
+ND N+ M KG PNV + L+ C C GR ++A +LL MI + +V
Sbjct: 269 KNVNDALNL---FTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 325
Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
++ LID F + +L A L+++M++ P++ TY+SLI GF A ++
Sbjct: 326 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 385
Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
+ S+ P++V +N LI K ++ ++++ + + LV ++
Sbjct: 386 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT--------------- 430
Query: 376 FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLR 435
V YN L+ +AG + A K++ M+ G PD ++ LL
Sbjct: 431 -----------------VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 473
Query: 436 GLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL 495
GLC K+++A+ V++ + + + + + +++ + +AG+ LF ++
Sbjct: 474 GLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 533
Query: 496 DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
+V+ YT I G G EEA L+ +MK PN+ TY ++
Sbjct: 534 NVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 577
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/447 (23%), Positives = 199/447 (44%), Gaps = 33/447 (7%)
Query: 155 FARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
+RN+++D+ VDL ++++ LP+ + FN L + K+N V + M
Sbjct: 51 LSRNVLLDLKLD-DAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNL 109
Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
++ + IL+NCFC+ ++ A +LG M+ LG + + L++G+ +R+ A
Sbjct: 110 RISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEA 169
Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
L ++M PN VT+ +LI G S A + +D + + G PDL + +++
Sbjct: 170 VALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNG 229
Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVV 394
L K G D AL SLL K+ G ++EAD+V+
Sbjct: 230 LCKRGDIDLAL-------------------------------SLLKKMEKG-KIEADVVI 257
Query: 395 YNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIV 454
Y ++ C N A+ L+ M +KG P+ ++ L+R LC + +A + ++
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317
Query: 455 MNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTE 514
N +A++D ++ G+ +A +L+ I D+ +Y+ I G R +
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 515 EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLT 574
EA ++ M PN TY ++ FCK + ++ L +++ + + T L
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437
Query: 575 KFIFKFHSSSSAVNQLVEMCNLGLIPD 601
+ +F+ A +M + G+ PD
Sbjct: 438 QGLFQAGDCDMAQKIFKKMVSDGVPPD 464
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 131/290 (45%), Gaps = 36/290 (12%)
Query: 151 TPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKD 206
PN + ++D K G++ L +++K + P+ +++ + C + + K
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 381
Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
+ +M+ K +PNV + L+ FCK R+ E +L M G + + LI G
Sbjct: 382 MFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLF 441
Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
+ DMA +++KMV +G P+++TY+ L+ G + A + L+ PD+
Sbjct: 442 QAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIY 501
Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL 386
+N++I+ + K G +D D+ FCSL L G
Sbjct: 502 TYNIMIEGMCKAGKVEDGWDL---------------FCSL----SLKG------------ 530
Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
V+ ++++Y ++S FC+ G +A L+ M + G P++ ++ L+R
Sbjct: 531 -VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 579
Score = 75.9 bits (185), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 88/189 (46%), Gaps = 4/189 (2%)
Query: 115 CVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI 174
C T+ ++ + + + +E F EM + G NT N ++ LF+ G D+
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450
Query: 175 KVLK----ETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCF 230
K+ K + P+ ++++I L LCK + V + + P++ + I++
Sbjct: 451 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 510
Query: 231 CKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNV 290
CK G++ + + L + G +V +T +I GF R + A L+ +M ++G PN
Sbjct: 511 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNS 570
Query: 291 VTYTSLIKG 299
TY +LI+
Sbjct: 571 GTYNTLIRA 579
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 210/418 (50%), Gaps = 15/418 (3%)
Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCN 194
++ F +M + P+ N ++ + K+ + D+ I + K+ ++ + +FNI +
Sbjct: 70 IDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINC 129
Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
C VS ++G M++ G+ P+ L+N FC+ R+++A L+ M+ +G
Sbjct: 130 FCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPD 189
Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
+ A+ +ID + +R++ A ++++ + G PNVVTYT+L+ G + +S A L
Sbjct: 190 IVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLS 249
Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
+ + P+++ ++ L+D K G +A ++++ ++ + + PD T+ SL++ +CL
Sbjct: 250 DMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHD 309
Query: 375 R-------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
R F L+ C AD+V YN L++ FCKA +KL+ M +G +
Sbjct: 310 RIDEANQMFDLMVSKGC----LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365
Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
++ L++G A +D+A + + + + + ++ L + G KA+ +F
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425
Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
+ LD+V+YT IRG+ + G+ EEA+ L+ + + P+ TY M+ C +
Sbjct: 426 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTK 483
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 193/408 (47%), Gaps = 6/408 (1%)
Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
KLND D+ MV+ +P++ F LL+ K+ + L M LG +
Sbjct: 65 KLNDAI---DLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
+ ++I+ F ++ +A + KM++ G P+ VT SL+ GF S A S +D +
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
G+ PD+V +N +ID L K +DA D + + + P+ T+ +L++ +C S R+
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 377 SLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
S +L+ + ++ +++ Y+ALL F K G +A +L+ M+ PD ++ L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
+ GLC +IDEA ++ +V + + +++ +A R ++LFR
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
+ V+Y I+G + G ++A +SQM + P+ +TY ++L C ++
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 421
Query: 554 LLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
+ +D+ ++LD T + + + K A + + GL PD
Sbjct: 422 IFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 469
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 162/364 (44%), Gaps = 42/364 (11%)
Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
I+G++ ++G T + + R + D+M G+ P+ A N ++D L
Sbjct: 142 ILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLC 201
Query: 166 KIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
K RV+ KE + PN +++ + LC + S+ ++ M++K PNV
Sbjct: 202 KTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVI 261
Query: 222 MFEILLNCFCKMG-----------------------------------RIAEAYQLLGLM 246
+ LL+ F K G RI EA Q+ LM
Sbjct: 262 TYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM 321
Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
++ G V ++ LI+GF + +R++ L+ +M Q G N VTY +LI+GF +A
Sbjct: 322 VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDV 381
Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
A F ++ G +PD+ +N+L+ L G + AL +++ + + ++ D T+ ++
Sbjct: 382 DKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTV 441
Query: 367 LSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
+ +C +G+ L C L ++ D+V Y ++S C G ++ LY M +G
Sbjct: 442 IRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
Query: 424 TPDN 427
++
Sbjct: 502 MKND 505
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 95/214 (44%), Gaps = 13/214 (6%)
Query: 82 DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
DV S++ +I+ + R E + E+++ G V T+ ++ +++ E
Sbjct: 329 DVVSYNTLINGFCK-AKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387
Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP----NFLSFNIALCNLCK 197
F +M FG +P+ + NI++ L G ++ + + ++ Q + +++ + +CK
Sbjct: 388 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 447
Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
V + + KG P++ + +++ C G + E L M G L N
Sbjct: 448 TGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG--LMKND 505
Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVV 291
T L DG + ++ L +KM+ G +P+++
Sbjct: 506 CT-LSDG-----DITLSAELIKKMLSCGYAPSLL 533
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/496 (23%), Positives = 230/496 (46%), Gaps = 21/496 (4%)
Query: 85 SFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDE 144
F + SVV R T +++ V + ++ G T + + R + A +
Sbjct: 74 DFSRLFSVVAR-TKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGK 132
Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKLND 200
+ + G+ P+T + +++ L GRV +L ++++ P ++ N + LC
Sbjct: 133 IIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGK 192
Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
VS+ +I MV GF PN + +L CK G+ A A +LL M L +++
Sbjct: 193 VSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSI 252
Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
+IDG + LD A L+ +M G +++ YT+LI+GF A + L +
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312
Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----- 375
PD+V + LIDC K G +A +++ +++ + PD+ T+ SL+ C +
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372
Query: 376 --FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
L+ CG ++ +N L++ +CKA + ++L+ M +G D ++ L
Sbjct: 373 HMLDLMVSKGCG----PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTL 428
Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
++G C K++ A ++Q +V + + ++D L + G KA+++F + K
Sbjct: 429 IQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKM 488
Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
LD+ Y + I G+ + ++A+ L+ + V P+ TY +M+ CK+ ++
Sbjct: 489 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA-- 546
Query: 554 LLQDVIDARIELDYHT 569
D++ ++E D H+
Sbjct: 547 ---DLLFRKMEEDGHS 559
Score = 162 bits (410), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 201/432 (46%), Gaps = 36/432 (8%)
Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF----LSFNIALCNLCK 197
D M GF PN V+ V+ K G+ L +++L++ + + ++I + LCK
Sbjct: 200 IDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCK 259
Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
+ N ++ M KGF ++ ++ L+ FC GR + +LL MI + V A
Sbjct: 260 DGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA 319
Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
++ LID F + +L A L ++M+Q G SP+ VTYTSLI GF + A LD++
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMV 379
Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
S+G P++ N+LI+ K DD L+++ + L G
Sbjct: 380 SKGCGPNIRTFNILINGYCKANLIDDGLELF-------------------RKMSLRG--- 417
Query: 378 LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
V AD V YN L+ FC+ G A +L+ M+ + PD S+ LL GL
Sbjct: 418 ----------VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGL 467
Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
C + ++A+ +++ I + ++ ++ I+ + A + A LF ++ DV
Sbjct: 468 CDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDV 527
Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
+Y + I GL + G EA +L+ +M+ PN TY +++ + E + +L+++
Sbjct: 528 KTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEE 587
Query: 558 VIDARIELDYHT 569
+ +D T
Sbjct: 588 IKRCGFSVDAST 599
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/474 (22%), Positives = 212/474 (44%), Gaps = 46/474 (9%)
Query: 170 VDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
VDL ++ + P + F+ + + V D+ M KG N+ I++NC
Sbjct: 57 VDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINC 116
Query: 230 FCKM-----------------------------------GRIAEAYQLLGLMITLGTSLS 254
C+ GR++EA +L+ M+ +G +
Sbjct: 117 CCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPT 176
Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
+ L++G ++ A L ++MV+ G PN VTY ++K ++ ++A L
Sbjct: 177 LITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLR 236
Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
+E D V ++++ID L K GS D+A ++++ + D + +L+ C +G
Sbjct: 237 KMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAG 296
Query: 375 RFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
R+ KL+ + ++ D+V ++AL+ F K G +A +L+ M+ +G +PD ++
Sbjct: 297 RWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYT 356
Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
L+ G C ++D+A ++ +V N +++ +A ++LFR+ +
Sbjct: 357 SLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLR 416
Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
D V+Y I+G E G+ E A L+ +M V P+ +Y+++L C +
Sbjct: 417 GVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKA 476
Query: 552 KRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEM-CNL---GLIPD 601
+ + + +++ELD I + I ++S V+ ++ C+L G+ PD
Sbjct: 477 LEIFEKIEKSKMELD----IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPD 526
Score = 129 bits (325), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/430 (21%), Positives = 193/430 (44%), Gaps = 8/430 (1%)
Query: 96 LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
L G+ ++ + G T+ L++ + + +E +M +
Sbjct: 189 LNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAV 248
Query: 156 ARNIVMDVLFKIGRVDLGIKVLKETQLPNFLS----FNIALCNLCKLNDVSNVKDVIGMM 211
+I++D L K G +D + E ++ F + + + C + ++ M
Sbjct: 249 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM 308
Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
+++ P+V F L++CF K G++ EA +L MI G S +T LIDGF + +L
Sbjct: 309 IKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQL 368
Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
D A ++ + MV GC PN+ T+ LI G+ +A + + G D V +N L
Sbjct: 369 DKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTL 428
Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---V 388
I ++G + A +++ ++ ++ PD ++ LL +C +G ++ +E +
Sbjct: 429 IQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKM 488
Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
E D+ +YN ++ C A + A L+ ++ KG PD ++ ++ GLC + EA
Sbjct: 489 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADL 548
Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
+++ + + + N + ++ + G K+ +L + +D + + + +L
Sbjct: 549 LFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVV-DML 607
Query: 509 EGGRTEEAYI 518
GR +++++
Sbjct: 608 SDGRLKKSFL 617
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 174/384 (45%), Gaps = 30/384 (7%)
Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
D A L+++M ++ P ++ ++ L K + + +E +G A +L +++
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV---CGLEV 388
I+C + A +++L PD+ TF +L++ +CL GR S +LV +
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
+ L+ NAL++ C G + AV L + M++ GF P+ ++ +L+ +C + + A+
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
+ + + ++A ++ I+D L + G A LF ++ + D++ YT IRG
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYH 568
GR ++ L M + P+ + ++ F KE ++ + L +++I I D
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 569 TSIRLTKFIFKFHSSSSAVNQLVEM-------------------CNLGLIPD--EMWRKL 607
T L K + A + L M C LI D E++RK+
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413
Query: 608 ---GLLSDETMTPVSLFDGFVPCE 628
G+++D T+T +L GF CE
Sbjct: 414 SLRGVVAD-TVTYNTLIQGF--CE 434
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 166 bits (419), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 116/482 (24%), Positives = 225/482 (46%), Gaps = 15/482 (3%)
Query: 77 RDYFHD-----VQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWR 131
RD H V F + S + + T +++ V + ++ G T + + + R
Sbjct: 77 RDMIHSRPLPTVIDFSRLFSAIAK-TKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCR 135
Query: 132 GEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLS 187
+ A ++ + G+ PNT + +++ L GRV +L ++++ P+ ++
Sbjct: 136 CRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLIT 195
Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
N + LC + +I MV G PN + +LN CK G+ A A +LL M
Sbjct: 196 INTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKME 255
Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
L ++++IDG + LD A L+ +M G + N++TY LI GF A +
Sbjct: 256 ERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWD 315
Query: 308 IAFSFL-DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
L DM++ + + P++V +VLID K G +A +++ ++ + PD+ T+ SL
Sbjct: 316 DGAKLLRDMIKRKIN-PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 374
Query: 367 LSTVCLSG---RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
+ C + + + L+ + ++ +N L++ +CKA + ++L+ M +G
Sbjct: 375 IDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV 434
Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
D ++ L++G C K++ A ++Q +V N + ++D L + G KA++
Sbjct: 435 VADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALE 494
Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
+F + K LD+ Y + I G+ + ++A+ L+ + V P TY +M+ C
Sbjct: 495 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLC 554
Query: 544 KE 545
K+
Sbjct: 555 KK 556
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 196/408 (48%), Gaps = 7/408 (1%)
Query: 166 KIGRVDLGIKVLKETQLP----NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
K + DL + + K+ +L N + +I + C+ + +G +++ G+ PN
Sbjct: 100 KTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTI 159
Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
F L+N C GR++EA +L+ M+ +G + L++G + A L +KM
Sbjct: 160 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKM 219
Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
V+ GC PN VTY ++ ++ ++A L +E D V ++++ID L K GS
Sbjct: 220 VEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSL 279
Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNAL 398
D+A ++++ + + + T+ L+ C +GR+ KL+ + ++ ++V ++ L
Sbjct: 280 DNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVL 339
Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
+ F K G +A +L+ M+ +G PD ++ L+ G C +D+A + +V
Sbjct: 340 IDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGC 399
Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
N +++ +A R ++LFR+ + D V+Y I+G E G+ A
Sbjct: 400 DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKE 459
Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
L+ +M VPPN TY+++L C + + + + +++ELD
Sbjct: 460 LFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELD 507
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/432 (25%), Positives = 204/432 (47%), Gaps = 36/432 (8%)
Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF----LSFNIALCNLCK 197
D+M +G PN V++V+ K G+ L +++L++ + N + ++I + LCK
Sbjct: 216 IDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
+ N ++ M KG N+ + IL+ FC GR + +LL MI + +V
Sbjct: 276 HGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT 335
Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
++VLID F + +L A L ++M+ G +P+ +TYTSLI GF + A +D++
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395
Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
S+G P++ N+LI+ K DD L+++ + L G
Sbjct: 396 SKGCDPNIRTFNILINGYCKANRIDDGLELF-------------------RKMSLRG--- 433
Query: 378 LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
V AD V YN L+ FC+ G N A +L+ M+ + P+ ++ LL GL
Sbjct: 434 ----------VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGL 483
Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
C + ++A+ +++ I + ++ ++ I+ + A + A LF ++ V
Sbjct: 484 CDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGV 543
Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
+Y + I GL + G EA +L+ +M+ P+ +TY +++ + + + +L+++
Sbjct: 544 KTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEE 603
Query: 558 VIDARIELDYHT 569
+ +D T
Sbjct: 604 LKRCGFSVDAST 615
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/438 (21%), Positives = 206/438 (47%), Gaps = 10/438 (2%)
Query: 121 TFLLFLRIY---WRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI--- 174
T + F R++ + + Y +VL +M G N + +I+++ + ++ L
Sbjct: 87 TVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAM 146
Query: 175 -KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKM 233
K++K PN ++F+ + LC VS +++ MV G P++ L+N C
Sbjct: 147 GKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLS 206
Query: 234 GRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTY 293
G+ AEA L+ M+ G + + +++ + + +A L KM + + V Y
Sbjct: 207 GKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266
Query: 294 TSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE 353
+ +I G + AF+ + +E +G +++ +N+LI G +DD + +++
Sbjct: 267 SIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIK 326
Query: 354 LKLVPDSYTFCSLLSTVCLSGRF---SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQ 410
K+ P+ TF L+ + G+ L K + + D + Y +L+ FCK ++
Sbjct: 327 RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDK 386
Query: 411 AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVD 470
A ++ + M+ KG P+ +F L+ G C A +ID+ + +++ + + + + ++
Sbjct: 387 ANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQ 446
Query: 471 RLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
E G+ + A +LF+ + K P ++V+Y + + GL + G +E+A ++ +++ +
Sbjct: 447 GFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMEL 506
Query: 531 NAYTYRVMLLSFCKERNI 548
+ Y +++ C +
Sbjct: 507 DIGIYNIIIHGMCNASKV 524
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/430 (22%), Positives = 196/430 (45%), Gaps = 8/430 (1%)
Query: 96 LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
L+G+ ++ ++ GC A T+ L + + + +E +M +
Sbjct: 205 LSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAV 264
Query: 156 ARNIVMDVLFKIGRVDLGIKVLKETQLP----NFLSFNIALCNLCKLNDVSNVKDVIGMM 211
+I++D L K G +D + E ++ N +++NI + C + ++ M
Sbjct: 265 KYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM 324
Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
+++ PNV F +L++ F K G++ EA +L MI G + +T LIDGF + L
Sbjct: 325 IKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHL 384
Query: 272 DMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVL 331
D A + + MV GC PN+ T+ LI G+ +A + G D V +N L
Sbjct: 385 DKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTL 444
Query: 332 IDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---V 388
I ++G + A +++ ++ K+ P+ T+ LL +C +G ++ +E +
Sbjct: 445 IQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKM 504
Query: 389 EADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
E D+ +YN ++ C A + A L+ ++ KG P ++ ++ GLC + EA
Sbjct: 505 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAEL 564
Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
+++ + + A + + ++ + G K+++L + +D + + I +L
Sbjct: 565 LFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVI-DML 623
Query: 509 EGGRTEEAYI 518
GR +++++
Sbjct: 624 SDGRLKKSFL 633
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 183/382 (47%), Gaps = 25/382 (6%)
Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
+V ++ L + ++ D+ L ++M G + N+ T + +I F + +AFS +
Sbjct: 87 TVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAM 146
Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
+ G+ P+ + + LI+ L G +AL++ D ++E+ PD T +L++ +CLS
Sbjct: 147 GKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLS 206
Query: 374 GRFS----LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYS 429
G+ + L+ K+V + + V Y +L+ CK+G A++L M ++ D
Sbjct: 207 GKEAEAMLLIDKMV-EYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 430 FVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAI 489
+ ++ GLC +D A N++ + M N + ++ AGR +L R I
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 490 VEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
K +VV+++V I ++ G+ EA L+ +M H + P+ TY ++ FCKE ++
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 550 MVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKL-- 607
++ +D + +IR + + ++ ++ GL E++RK+
Sbjct: 386 KANQM----VDLMVSKGCDPNIRTFNILINGYCKANRIDD-------GL---ELFRKMSL 431
Query: 608 -GLLSDETMTPVSLFDGFVPCE 628
G+++D T+T +L GF CE
Sbjct: 432 RGVVAD-TVTYNTLIQGF--CE 450
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 166 bits (419), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 105/414 (25%), Positives = 201/414 (48%), Gaps = 7/414 (1%)
Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCN 194
L+ F M P+ ++ V+ K+ R D+ I + ++ Q+ P + NI +
Sbjct: 68 LDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHC 127
Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
+C + +G M++ GF P++ F LLN +C RI +A L ++ +G +
Sbjct: 128 VCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPN 187
Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
V +T LI + R L+ A L+ +M NG PNVVTY +L+ G E + A L
Sbjct: 188 VVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLR 247
Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
+ P+++ LID K+G +A ++Y+ ++++ + PD +T+ SL++ +C+ G
Sbjct: 248 DMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYG 307
Query: 375 RFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
++ +E + V+Y L+ FCK+ +K++ M KG + ++
Sbjct: 308 LLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYT 367
Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
L++G C + D A V+ + + + ++D L G+ KA+ +F
Sbjct: 368 VLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKR 427
Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
+ +++V+YT+ I+G+ + G+ E+A+ L+ + + PN TY M+ FC+
Sbjct: 428 EMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRR 481
Score = 132 bits (333), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 106/472 (22%), Positives = 210/472 (44%), Gaps = 49/472 (10%)
Query: 170 VDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
+DL +++ LP+ + F L + K+N V + M G P + I+++C
Sbjct: 68 LDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHC 127
Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
C + A LG M+ LG + +T L++G+ R++ A L+++++ G PN
Sbjct: 128 VCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPN 187
Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
VVTYT+LI+ + + + A + + + G P++V +N L+ L ++G + DA +
Sbjct: 188 VVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLR 247
Query: 350 GLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPN 409
+++ ++ P+ TF AL+ F K G
Sbjct: 248 DMMKRRIEPNVITF--------------------------------TALIDAFVKVGKLM 275
Query: 410 QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
+A +LYN M+ PD +++ L+ GLC +DEA ++ + N N ++T ++
Sbjct: 276 EAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLI 335
Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
++ R +++F + + ++YTV I+G GR + A +++QM P
Sbjct: 336 HGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAP 395
Query: 530 PNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQ 589
P+ TY V+L C ++ + + + ++++ T + + + K A +
Sbjct: 396 PDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDL 455
Query: 590 LVEMCNLGLIPDEM--------WRKLGLLSDETMTPVSLF-----DGFVPCE 628
+ + G+ P+ + + + GL+ + SLF DGF+P E
Sbjct: 456 FCSLFSKGMKPNVITYTTMISGFCRRGLIHEAD----SLFKKMKEDGFLPNE 503
Score = 126 bits (317), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 166/352 (47%), Gaps = 7/352 (1%)
Query: 107 VGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK 166
+G++ ++G TF L Y + FD++ GF PN ++ L K
Sbjct: 141 LGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCK 200
Query: 167 IGRVDLGIKVLKET----QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
++ +++ + PN +++N + LC++ + ++ M+++ PNV
Sbjct: 201 NRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVIT 260
Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
F L++ F K+G++ EA +L +MI + V + LI+G LD A ++ M
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLME 320
Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
+NGC PN V YT+LI GF ++K + +G + + + VLI +G D
Sbjct: 321 RNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPD 380
Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALL 399
A +V++ + + PD T+ LL +C +G+ ++ + + E++ ++V Y ++
Sbjct: 381 VAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIII 440
Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQ 451
CK G A L+ ++ KG P+ ++ ++ G C I EA ++++
Sbjct: 441 QGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFK 492
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 158/335 (47%), Gaps = 7/335 (2%)
Query: 99 RFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARN 158
R E + ++ +G T+ +R + +E F++MG G PN N
Sbjct: 168 RIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYN 227
Query: 159 IVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRK 214
++ L +IGR +L++ PN ++F + K+ + K++ +M++
Sbjct: 228 ALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQM 287
Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
YP+V + L+N C G + EA Q+ LM G + +T LI GF + +R++
Sbjct: 288 SVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDG 347
Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
++ +M Q G N +TYT LI+G+ +A + + S PD+ +NVL+D
Sbjct: 348 MKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDG 407
Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEAD 391
L G + AL +++ + + ++ + T+ ++ +C G+ L C L ++ +
Sbjct: 408 LCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPN 467
Query: 392 LVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
++ Y ++S FC+ G ++A L+ M + GF P+
Sbjct: 468 VITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 165 bits (418), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 191/378 (50%), Gaps = 3/378 (0%)
Query: 170 VDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
+DL +++ LP+ F+ L + K+ V + M G N+ ILLNC
Sbjct: 66 LDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNC 125
Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
FC+ +++ A LG MI LG S+ + L++GF R R+ A Y++++MV G PN
Sbjct: 126 FCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPN 185
Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
VV Y ++I G ++K A L+ +E +G PD+V +N LI L G + DA +
Sbjct: 186 VVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVS 245
Query: 350 GLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAG 406
+ + ++ PD +TF +L+ GR S + + ++ D+V Y+ L+ C
Sbjct: 246 CMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYS 305
Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
++A +++ M+ KG PD ++ L+ G C ++K++ + ++ + N +T
Sbjct: 306 RLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYT 365
Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
++ AG+ + A ++FRR + ++++Y V + GL + G+ E+A ++ + M+
Sbjct: 366 ILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKN 425
Query: 527 AVPPNAYTYRVMLLSFCK 544
+ + TY +++ CK
Sbjct: 426 GMDADIVTYNIIIRGMCK 443
Score = 156 bits (395), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 196/399 (49%), Gaps = 11/399 (2%)
Query: 155 FARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGM 210
F+R ++ + K+ + D+ I + ++ Q+ N + NI L C+ + +S +G
Sbjct: 84 FSR--LLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGK 141
Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
M++ G P++ F LLN FC+ R+ +A + M+ +G +V + +IDG + ++
Sbjct: 142 MIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQ 201
Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
+D A L +M ++G P+VVTY SLI G + +S A + + PD+ N
Sbjct: 202 VDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNA 261
Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA 390
LID K G +A + Y+ ++ L PD T+ L+ +C+ R ++ G V
Sbjct: 262 LIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMF-GFMVSK 320
Query: 391 ----DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
D+V Y+ L++ +CK+ +KL+ M +G + ++ L++G C A K++ A
Sbjct: 321 GCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVA 380
Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
+++ +V N + ++ L + G+ KA+ + D+V+Y + IRG
Sbjct: 381 EEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRG 440
Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
+ + G +A+ +Y + + P+ +TY M+L K+
Sbjct: 441 MCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKK 479
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 192/402 (47%), Gaps = 4/402 (0%)
Query: 206 DVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF 265
D+ MV+ P++ F LL+ KM + L M LG ++ +L++ F
Sbjct: 67 DLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCF 126
Query: 266 RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL 325
R +L +A KM++ G P++VT+ SL+ GF A D + G+ P++
Sbjct: 127 CRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNV 186
Query: 326 VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCG 385
V +N +ID L K D+ALD+ + + + + PD T+ SL+S +C SGR+S ++V
Sbjct: 187 VIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSC 246
Query: 386 L---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
+ E+ D+ +NAL+ K G ++A + Y M+ + PD ++ L+ GLC +
Sbjct: 247 MTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSR 306
Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTV 502
+DEA ++ +V + ++ +++ ++ + ++LF + V+YT+
Sbjct: 307 LDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTI 366
Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
I+G G+ A ++ +M V PN TY V+L C I+ +L D+
Sbjct: 367 LIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNG 426
Query: 563 IELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMW 604
++ D T + + + K + A + + GL+PD +W
Sbjct: 427 MDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPD-IW 467
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/433 (22%), Positives = 194/433 (44%), Gaps = 34/433 (7%)
Query: 79 YFHDVQ--------SFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYW 130
+FH VQ F ++S ++++ +++ V + ++ +G T + L +
Sbjct: 69 FFHMVQCRPLPSIADFSRLLSAISKMK-KYDVVIYLWEQMQMLGIPHNLCTCNILLNCFC 127
Query: 131 RGEMYGMVLEAFDEMGRFGFTP---------NTFAR-NIVMDVLFKIGR-VDLGIKVLKE 179
R + L +M + G P N F R + V D L+ + V +G K
Sbjct: 128 RCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYK---- 183
Query: 180 TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEA 239
PN + +N + LCK V N D++ M + G P+V + L++ C GR ++A
Sbjct: 184 ---PNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 240 YQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG 299
+++ M V + LID + R+ A +E+M++ P++VTY+ LI G
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300
Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
A + S+G PD+V +++LI+ K + + ++ + + +V +
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360
Query: 360 SYTFCSLLSTVCLSGRFSLLPKLV-----CGLEVEADLVVYNALLSYFCKAGFPNQAVKL 414
+ T+ L+ C +G+ ++ ++ CG V +++ YN LL C G +A+ +
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMVFCG--VHPNIITYNVLLHGLCDNGKIEKALVI 418
Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
M G D ++ ++RG+C A ++ +A ++Y + + +T ++ L +
Sbjct: 419 LADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYK 478
Query: 475 AGRCHKAIQLFRR 487
G +A LFR+
Sbjct: 479 KGLRREADALFRK 491
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 160/362 (44%), Gaps = 42/362 (11%)
Query: 107 VGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK 166
+G++ ++G TF L + RG+ L FD+M G+ PN N ++D L K
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 167 IGRVDLGIKVL----KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
+VD + +L K+ P+ +++N + LC S+ ++ M ++ YP+V
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 223 FEILLNCFCKMGRIAEA------------------YQLL-----------------GLMI 247
F L++ K GR++EA Y LL G M+
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
+ G V +++LI+G+ + ++++ L+ +M Q G N VTYT LI+G+ A +
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378
Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
+A + G P+++ +NVL+ L G + AL + + + + D T+ ++
Sbjct: 379 VAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIII 438
Query: 368 STVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
+C +G + + C L + D+ Y ++ K G +A L+ M + G
Sbjct: 439 RGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGIL 498
Query: 425 PD 426
P+
Sbjct: 499 PN 500
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 133/287 (46%), Gaps = 5/287 (1%)
Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
R +LD + L+ MVQ P++ ++ L+ + K + + + ++ G +L
Sbjct: 58 RFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLC 117
Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKL 382
N+L++C + AL +++L P TF SLL+ C R + ++
Sbjct: 118 TCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQM 177
Query: 383 VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
V G+ + ++V+YN ++ CK+ + A+ L N M G PD ++ L+ GLC + +
Sbjct: 178 V-GMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGR 236
Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTV 502
+A + + + A++D ++ GR +A + + I D+V+Y++
Sbjct: 237 WSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSL 296
Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
I GL R +EA ++ M P+ TY +++ +CK + ++
Sbjct: 297 LIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVE 343
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 117/263 (44%), Gaps = 3/263 (1%)
Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL---LPKLVCGLEVEADLVVYNAL 398
DD+LD++ +++ + +P F LLS + ++ + L + + L + +L N L
Sbjct: 63 DDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNIL 122
Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
L+ FC+ + A+ M+ G P +F LL G C ++ +A+ ++ +V
Sbjct: 123 LNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGY 182
Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
N ++ I+D L ++ + A+ L R + DVV+Y I GL GR +A
Sbjct: 183 KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATR 242
Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
+ S M + P+ +T+ ++ + KE + + +++I ++ D T L +
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLC 302
Query: 579 KFHSSSSAVNQLVEMCNLGLIPD 601
+ A M + G PD
Sbjct: 303 MYSRLDEAEEMFGFMVSKGCFPD 325
>sp|P0C8A0|PP275_ARATH Pentatricopeptide repeat-containing protein At3g49730
OS=Arabidopsis thaliana GN=At3g49730 PE=2 SV=1
Length = 638
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 129/541 (23%), Positives = 239/541 (44%), Gaps = 44/541 (8%)
Query: 29 HQISSPKVCATTHQDFPIILAPHIVHSTLLNC-PSDLIALSFFIWCAKQRDYFHDVQSFD 87
H PK+ ++ I L P ++ L C + + FF+W KQ YFH +
Sbjct: 77 HHSRVPKLELALNES-GIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYEVCK 135
Query: 88 HMISVVTRLTGRFETVRGIVGELARVGC-VIKAQTFLLFLRIYWRGEMYGMVLEAFDEMG 146
M+ +++++ +F V G++ E+ + +I+ + F++ +R + M +E DEM
Sbjct: 136 SMVMILSKMR-QFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMP 194
Query: 147 RFGFTPNTFARNIVMDVLFKIGRVDLGIKV---LKETQLPNFLSFNIALCNLCKLNDVSN 203
++G P+ + ++D L K G V KV ++E PN F L C+ +
Sbjct: 195 KYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLME 254
Query: 204 VKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLID 263
K+V+ M G P++ +F LL+ + G++A+AY L+ M G +VN +TVLI
Sbjct: 255 AKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQ 314
Query: 264 GF-RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
R +R+D A ++ +M + GC ++VTYT+LI GF + M +S LD + +G
Sbjct: 315 ALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVM 374
Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL 382
P V + ++ K +++ L++ + + P
Sbjct: 375 PSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHP------------------------ 410
Query: 383 VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
DL++YN ++ CK G +AV+L+N M G +P +FV ++ G
Sbjct: 411 --------DLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGF 462
Query: 443 IDEAINVYQGIVMNN--PAVNAHVHTAIVDRLIEAGRCHKAIQLFR--RAIVEKYPLDVV 498
+ EA N ++ +V A ++++ L+ + A ++ L+V
Sbjct: 463 LIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVS 522
Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
++T+ I L G +EA M + + P TY ++ K N + + + V
Sbjct: 523 AWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGLNKLYNRTIAAEITEKV 582
Query: 559 I 559
+
Sbjct: 583 V 583
Score = 33.9 bits (76), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 50/113 (44%), Gaps = 6/113 (5%)
Query: 457 NPA-VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA--IRGLLEGGRT 513
NP + + ++ R A KA+++ + KY L+ Y + L + G
Sbjct: 161 NPELIEPELFVVLMRRFASANMVKKAVEVLDE--MPKYGLEPDEYVFGCLLDALCKNGSV 218
Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
+EA ++ M+ PPN + +L +C+E + K +L + +A +E D
Sbjct: 219 KEASKVFEDMRE-KFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPD 270
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 187/364 (51%), Gaps = 3/364 (0%)
Query: 184 NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
+ SF I + C+ + +S V+G M++ G+ P++ F LL+ FC + RI +A+ L+
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
LM+ G +V + LIDG + L++A L +M + G +VVTY +L+ G +
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
+S A L + PD+V LID K G+ D+A ++Y +++ + P++ T+
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 364 CSLLSTVCLSGRFSLLPK---LVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
S+++ +C+ GR K L+ ++V YN L+S FCK ++ +KL+ M
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344
Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
+GF D +++ L+ G C K+ A++++ +V + H ++ L G
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIES 404
Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
A+ F + + +V+Y + I GL + + E+A+ L+ ++ V P+A TY +M+L
Sbjct: 405 ALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMIL 464
Query: 541 SFCK 544
CK
Sbjct: 465 GLCK 468
Score = 136 bits (342), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 198/432 (45%), Gaps = 17/432 (3%)
Query: 50 PHIVHST-LLNCPSDLIALSFFIWCAKQRDYF---HDVQSFDHMISVVTRLTGRFETVRG 105
P IV T LL ++L I+ +++ + + HD+ SF +I R + R
Sbjct: 69 PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCS-RLSFALS 127
Query: 106 IVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLF 165
++G++ ++G TF L + G M + G+ PN N ++D L
Sbjct: 128 VLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLC 187
Query: 166 KIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
K G +++ +++L E + + +++N L LC S+ ++ M+++ P+V
Sbjct: 188 KNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVV 247
Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
F L++ F K G + EA +L MI + + +I+G RL A ++ M
Sbjct: 248 TFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLM 307
Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
GC PNVVTY +LI GF + +M + EG D+ +N LI ++G
Sbjct: 308 ASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKL 367
Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF-SLLPKLVCGLEVEA--DLVVYNAL 398
ALD++ ++ ++ PD T C LL +C++G S L K E E +V YN +
Sbjct: 368 RVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIM 427
Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG---ARKIDEAINVY--QGI 453
+ CKA +A +L+ + +G PD ++ ++ GLC R+ DE I +GI
Sbjct: 428 IHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Query: 454 VMNNPAVNAHVH 465
+ A + H+
Sbjct: 488 ICQMNAEDDHLE 499
Score = 112 bits (281), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 136/297 (45%), Gaps = 5/297 (1%)
Query: 264 GFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP 323
GF R + A L+ +MV + P++V +T L+ + + F +E G +
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104
Query: 324 DLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLL 379
DL +LI C + AL V +++L P TF SLL CL R FSL+
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 380 PKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
+V E ++VVYN L+ CK G N A++L N M KG D ++ LL GLC
Sbjct: 165 ILMVKS-GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCY 223
Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
+ + +A + + ++ + + TA++D ++ G +A +L++ I + V+
Sbjct: 224 SGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVT 283
Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
Y I GL GR +A + M PN TY ++ FCK R + +L Q
Sbjct: 284 YNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQ 340
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 153/359 (42%), Gaps = 38/359 (10%)
Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
MV P++ F LL + R M G S + ++T+LI F R R
Sbjct: 62 MVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSR 121
Query: 271 LDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNV 330
L A + KM++ G P++VT+ SL+ GF AFS + ++ G+ P++V +N
Sbjct: 122 LSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNT 181
Query: 331 LIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE- 389
LID L C +G ++ +L+ +E +
Sbjct: 182 LIDGL-----------------------------------CKNGELNIALELLNEMEKKG 206
Query: 390 --ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
AD+V YN LL+ C +G + A ++ M+ + PD +F L+ +DEA
Sbjct: 207 LGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQ 266
Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
+Y+ ++ ++ N + +I++ L GR + A + F + +VV+Y I G
Sbjct: 267 ELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGF 326
Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
+ +E L+ +M + +TY ++ +C+ +++ + ++ R+ D
Sbjct: 327 CKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPD 385
Score = 72.4 bits (176), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 104/227 (45%), Gaps = 3/227 (1%)
Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNA 397
++DA ++ ++ + +P F LL+ R+ + +E + DL +
Sbjct: 52 FEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTI 111
Query: 398 LLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
L+ FC+ + A+ + M+ G+ P +F LL G C +I +A ++ +V +
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171
Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAY 517
N V+ ++D L + G + A++L + DVV+Y + GL GR +A
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231
Query: 518 ILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIE 564
+ M ++ P+ T+ ++ F K+ N+ + L +++I + ++
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVD 278
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 138/598 (23%), Positives = 245/598 (40%), Gaps = 63/598 (10%)
Query: 65 IALSFFIWCAKQRDYFHD---------------VQSFD---HMISVVTRLTGRFETVRGI 106
+AL F W KQ D + +D H++ ++ ++G+ V G
Sbjct: 52 LALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFGA 111
Query: 107 VGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK 166
+ R+ C + + +R+Y R M LE F MG +GF P+ + N ++ + K
Sbjct: 112 LMTTYRL-CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVK 170
Query: 167 IGRVDLGI-----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVR 221
G D+ + ++LK P+ +FNI + LC ++ M + G+ P +
Sbjct: 171 SGE-DVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIV 229
Query: 222 MFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKM 281
+ +L+ +CK GR A +LL M + G V + +LI R R+ L M
Sbjct: 230 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 289
Query: 282 VQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSY 341
+ PN VTY +LI GF IA L+ + S G +P+ V N LID G++
Sbjct: 290 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 349
Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNAL 398
+AL ++ + L P ++ LL +C + F L ++ V + Y +
Sbjct: 350 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 409
Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK---------------- 442
+ CK GF ++AV L N M G PD ++ L+ G C +
Sbjct: 410 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 469
Query: 443 -------------------IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
+ EAI +Y+ +++ + +V L +AG+ +A +
Sbjct: 470 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE 529
Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFC 543
R + + VS+ I G G +A+ ++ +M + P +TY +L C
Sbjct: 530 FMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLC 589
Query: 544 KERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
K +++ ++ L+ + +D L + K + + AV+ EM ++PD
Sbjct: 590 KGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPD 647
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 128/547 (23%), Positives = 217/547 (39%), Gaps = 61/547 (11%)
Query: 72 WCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLR---I 128
W K+ + ++ DHM S + T ++ +L R + K L +R I
Sbjct: 237 WYCKKGRFKAAIELLDHMKS--KGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMI 294
Query: 129 YWRGEMYGMVLEAF-------------DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIK 175
+ Y ++ F +EM FG +PN N ++D G +K
Sbjct: 295 HPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALK 354
Query: 176 VLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFC 231
+ + P+ +S+ + L LCK + + M R G + +++ C
Sbjct: 355 MFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLC 414
Query: 232 KMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVV 291
K G + EA LL M G + ++ LI+GF ++ R A + ++ + G SPN +
Sbjct: 415 KNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGI 474
Query: 292 TYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG------------ 339
Y++LI A + + EGH D NVL+ L K G
Sbjct: 475 IYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCM 534
Query: 340 ----------SYD-------------DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
S+D A V+D + ++ P +T+ SLL +C G
Sbjct: 535 TSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHL 594
Query: 377 SLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
K + L D V+YN LL+ CK+G +AV L+ M+ + PD+Y++ L
Sbjct: 595 REAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSL 654
Query: 434 LRGLCGARKIDEAI-NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK 492
+ GLC K AI + N N ++T VD + +AG+ I +
Sbjct: 655 ISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLG 714
Query: 493 YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVK 552
+ D+V+ I G G+ E+ L +M + PN TY ++L + K +++
Sbjct: 715 HTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSF 774
Query: 553 RLLQDVI 559
L + +I
Sbjct: 775 LLYRSII 781
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 109/477 (22%), Positives = 183/477 (38%), Gaps = 80/477 (16%)
Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ-LP---NFLSFNIALCNLCK 197
FDEM + G P F ++ L K G + K LK +P + + +N L +CK
Sbjct: 566 FDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCK 625
Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
+++ + G MV++ P+ + L++ C+ G+ A G L
Sbjct: 626 SGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKV 685
Query: 258 -WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
+T +DG + + Y E+M G +P++VT ++I G+ L +
Sbjct: 686 MYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEM 745
Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
++ P+L +N+L+ SK + +Y ++ ++PD T SL+ +C S
Sbjct: 746 GNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNML 805
Query: 377 SL----LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM------LDK----- 421
+ L +C VE D +N L+S C G N A L M LDK
Sbjct: 806 EIGLKILKAFIC-RGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDA 864
Query: 422 ------------------------GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN 457
G +P++ ++GL+ GLC I A V + ++ +
Sbjct: 865 MVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHK 924
Query: 458 PAVNAHVHTAIVDRLIEAGRCHKAIQLFR------------------------------- 486
+A+V L + G+ +A L R
Sbjct: 925 ICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEAL 984
Query: 487 --RAIVEK--YPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
R ++ LD+VSY V I GL G A+ LY +MK NA TY+ ++
Sbjct: 985 ELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALI 1041
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/497 (21%), Positives = 206/497 (41%), Gaps = 23/497 (4%)
Query: 82 DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
D+ ++ +I+ ++ GRF+T + IV + RVG + + R +
Sbjct: 437 DIVTYSALINGFCKV-GRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRI 495
Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIALCNLCK 197
++ M G T + F N+++ L K G+V + ++ + LPN +SF+ C
Sbjct: 496 YEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFD------CL 549
Query: 198 LNDVSNVKD------VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
+N N + V M + G +P + LL CK G + EA + L + +
Sbjct: 550 INGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPA 609
Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
++ + L+ + L A L+ +MVQ P+ TYTSLI G IA
Sbjct: 610 AVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAIL 669
Query: 312 FLDMLESEGHA-PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
F E+ G+ P+ V + +D + K G + + + + L PD T +++
Sbjct: 670 FAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGY 729
Query: 371 CLSGRFS----LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
G+ LLP++ +L YN LL + K + + LY +++ G PD
Sbjct: 730 SRMGKIEKTNDLLPEM-GNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPD 788
Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
+ L+ G+C + ++ + + + + V+ + ++ + G + A L +
Sbjct: 789 KLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVK 848
Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
LD + + L R +E+ ++ +M + P + Y ++ C+
Sbjct: 849 VMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVG 908
Query: 547 NIKMVKRLLQDVIDARI 563
+IK + +++I +I
Sbjct: 909 DIKTAFVVKEEMIAHKI 925
Score = 96.7 bits (239), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 146/339 (43%), Gaps = 46/339 (13%)
Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRV----DLGIKVLKETQLPNFLSFNIALCNLCKL 198
++M G TP+ N ++D ++G++ DL ++ + PN ++NI L K
Sbjct: 708 EQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKR 767
Query: 199 NDVSN-------------VKDV-----------------IGMMVRKGFY-----PNVRMF 223
DVS + D IG+ + K F + F
Sbjct: 768 KDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTF 827
Query: 224 EILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQ 283
+L++ C G I A+ L+ +M +LG SL + ++ R R + + +M +
Sbjct: 828 NMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSK 887
Query: 284 NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
G SP Y LI G AF + + + P V + ++ L+K G D+
Sbjct: 888 QGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADE 947
Query: 344 ALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF--SLLPKLV---CGLEVEADLVVYNAL 398
A + +L++KLVP +F +L+ C +G +L ++V CGL++ DLV YN L
Sbjct: 948 ATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKL--DLVSYNVL 1005
Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
++ C G A +LY M GF + ++ L+RGL
Sbjct: 1006 ITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1044
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 101/238 (42%), Gaps = 41/238 (17%)
Query: 82 DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
D + D M+SV+ R RF+ R ++ E+++ G +++ ++ + R G + A
Sbjct: 858 DKDTCDAMVSVLNR-NHRFQESRMVLHEMSKQGISPESRKYIGLINGLCR---VGDIKTA 913
Query: 142 F---DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKL 198
F +EM P A + ++ L K G+ D +L+
Sbjct: 914 FVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLR-------------------- 953
Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
M++ P + F L++ CK G + EA +L +M G L + ++
Sbjct: 954 -----------FMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSY 1002
Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
VLI G + +A L+E+M +G N TY +LI+G + + AFS D++
Sbjct: 1003 NVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARE---TAFSGADII 1057
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 194/404 (48%), Gaps = 6/404 (1%)
Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ---LPNFLSFNIALCNLCKLNDVSNVK 205
G P+ A N ++ L K+G+VD +KV +E + PN ++NI + LC+ +
Sbjct: 338 GSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAF 397
Query: 206 DVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGF 265
++ M + G +PNVR I+++ CK ++ EA + M + + LIDG
Sbjct: 398 ELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGL 457
Query: 266 RRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL 325
++ R+D A ++EKM+ + C N + YTSLIK F + ++ +PDL
Sbjct: 458 GKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDL 517
Query: 326 VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCG 385
N +DC+ K G + +++ + + VPD+ ++ L+ + +G + +L
Sbjct: 518 QLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYS 577
Query: 386 LEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARK 442
++ + D YN ++ FCK G N+A +L M KGF P ++ ++ GL +
Sbjct: 578 MKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDR 637
Query: 443 IDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTV 502
+DEA +++ +N ++++++D + GR +A + + + ++ ++
Sbjct: 638 LDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNS 697
Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
+ L++ EA + + MK + PN TY +++ CK R
Sbjct: 698 LLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVR 741
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 125/563 (22%), Positives = 233/563 (41%), Gaps = 24/563 (4%)
Query: 61 PSDLIALSFFIWCAKQ---RDYFHDVQ-----SFDHMISVVTRLTGRFETVR------GI 106
PS + + C K R+ + VQ F S T L G F V +
Sbjct: 131 PSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTL 190
Query: 107 VGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFK 166
++ +G F +R + + L DEM + N+ +D K
Sbjct: 191 FQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGK 250
Query: 167 IGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRM 222
+G+VD+ K E + P+ +++ + LCK N + ++ + + P
Sbjct: 251 VGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYA 310
Query: 223 FEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV 282
+ ++ + G+ EAY LL G+ SV A+ ++ R++ ++D A ++E+M
Sbjct: 311 YNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK 370
Query: 283 QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYD 342
++ +PN+ TY LI A AF D ++ G P++ N+++D L K D
Sbjct: 371 KDA-APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLD 429
Query: 343 DALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLPKLVCGLEVEADLVVYNAL 398
+A +++ + PD TFCSL+ + GR + + K++ + + +VY +L
Sbjct: 430 EACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKML-DSDCRTNSIVYTSL 488
Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
+ F G K+Y M+++ +PD + + A + ++ +++ I
Sbjct: 489 IKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRF 548
Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
+A ++ ++ LI+AG ++ +LF + LD +Y + I G + G+ +AY
Sbjct: 549 VPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQ 608
Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
L +MK P TY ++ K + L ++ RIEL+ L
Sbjct: 609 LLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFG 668
Query: 579 KFHSSSSAVNQLVEMCNLGLIPD 601
K A L E+ GL P+
Sbjct: 669 KVGRIDEAYLILEELMQKGLTPN 691
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 111/472 (23%), Positives = 208/472 (44%), Gaps = 18/472 (3%)
Query: 141 AFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNF-LSFNIALCNL 195
A + + F P V+ VL ++ V+ I+ + T+LP+ S+N L +
Sbjct: 52 AENTLSALSFKPQP---EFVIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVM 108
Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRM-FEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
+ + + ++G M GF P+V E++L C K ++ E Y ++ +M +
Sbjct: 109 ARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCV-KANKLREGYDVVQMMRKFKFRPA 167
Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
+A+T LI F + DM L+++M + G P V +T+LI+GF + A S LD
Sbjct: 168 FSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLD 227
Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
++S D+V +NV ID K+G D A + + L PD T+ S++ +C +
Sbjct: 228 EMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKAN 287
Query: 375 RFSLLPKLVCGLEVEADL---VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
R ++ LE + YN ++ + AG ++A L KG P ++
Sbjct: 288 RLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYN 347
Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
+L L K+DEA+ V++ + + A N + ++D L AG+ A +L R ++
Sbjct: 348 CILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFEL--RDSMQ 404
Query: 492 KYPL--DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
K L +V + + + L + + +EA ++ +M + P+ T+ ++ K +
Sbjct: 405 KAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVD 464
Query: 550 MVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
++ + ++D+ + L K F +M N PD
Sbjct: 465 DAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPD 516
Score = 126 bits (317), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 168/386 (43%), Gaps = 36/386 (9%)
Query: 151 TPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKD 206
+P+ N MD +FK G + G + +E + +P+ S++I + L K + +
Sbjct: 514 SPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYE 573
Query: 207 VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFR 266
+ M +G + R + I+++ FCK G++ +AYQLL M T G +V + +IDG
Sbjct: 574 LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLA 633
Query: 267 RLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLV 326
++ RLD A L+E+ NVV Y+SLI GF + A+ L+ L +G P+L
Sbjct: 634 KIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLY 693
Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL 386
N L+D L K ++AL + + ELK P+ T+ L++ +C +F
Sbjct: 694 TWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKF---------- 743
Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
N+A + M +G P S+ ++ GL A I EA
Sbjct: 744 ----------------------NKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEA 781
Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
++ N ++ + A+++ L R A LF P+ + V +
Sbjct: 782 GALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDT 841
Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNA 532
L + E+A I+ + ++ +A
Sbjct: 842 LHKNDCLEQAAIVGAVLRETGKARHA 867
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 147/342 (42%), Gaps = 23/342 (6%)
Query: 51 HIVHSTLLN--CPSDLIALSFFIWCA----------------KQRDYFHDVQSFDHMISV 92
H ++ ++N C DL L+ ++ C K R + D +S+ +I
Sbjct: 502 HKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHG 561
Query: 93 VTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTP 152
+ + ET + + GCV+ + + + + + + + +EM GF P
Sbjct: 562 LIKAGFANETYE-LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEP 620
Query: 153 NTFARNIVMDVLFKIGRVDLGIKVLKETQLP----NFLSFNIALCNLCKLNDVSNVKDVI 208
V+D L KI R+D + +E + N + ++ + K+ + ++
Sbjct: 621 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLIL 680
Query: 209 GMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRL 268
+++KG PN+ + LL+ K I EA M L + + + +LI+G ++
Sbjct: 681 EELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKV 740
Query: 269 RRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH 328
R+ + A W++M + G P+ ++YT++I G +A + A + D ++ G PD +
Sbjct: 741 RKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACY 800
Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
N +I+ LS DA +++ L + T LL T+
Sbjct: 801 NAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTL 842
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 160 bits (406), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/438 (23%), Positives = 211/438 (48%), Gaps = 6/438 (1%)
Query: 170 VDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
+DL +++ LP+ + F L + K+ V ++ + G ++ +L+NC
Sbjct: 57 LDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNC 116
Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
FC+ + A LG M+ LG + +T LI+GF R++ A + +MV+ G P+
Sbjct: 117 FCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPD 176
Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
VV YT++I + + A S D +E+ G PD+V + L++ L G + DA +
Sbjct: 177 VVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLR 236
Query: 350 GLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAG 406
G+ + K+ PD TF +L+ G+F +L + + + ++ Y +L++ FC G
Sbjct: 237 GMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEG 296
Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
++A +++ M KG PD ++ L+ G C +K+D+A+ ++ + N +T
Sbjct: 297 CVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYT 356
Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKH- 525
++ + G+ + A ++F + P ++ +Y V + L G+ ++A +++ M+
Sbjct: 357 TLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKR 416
Query: 526 --IAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSS 583
V PN +TY V+L C ++ + +D+ +++ T + + + K
Sbjct: 417 EMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKV 476
Query: 584 SSAVNQLVEMCNLGLIPD 601
+AVN + + G+ P+
Sbjct: 477 KNAVNLFCSLPSKGVKPN 494
Score = 149 bits (377), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 206/428 (48%), Gaps = 16/428 (3%)
Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCN 194
+ L+ F M P+ +++V+ K+ + D+ I + Q+ +S ++ CN
Sbjct: 53 FNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMG-VSHDLYTCN 111
Query: 195 L-----CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
L C+ + +G M++ GF P++ F L+N FC R+ EA ++ M+ +
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
G V +T +ID + ++ A L+++M G P+VV YTSL+ G + + A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
S L + PD++ N LID K G + DA ++Y+ ++ + + P+ +T+ SL++
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Query: 370 VCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
C+ G ++ +E + D+V Y +L++ FCK + A+K++ M KG T +
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351
Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
++ L++G K + A V+ +V N + ++ L G+ KA+ +F
Sbjct: 352 TITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFE 411
Query: 487 RAIVEKYPLDVV-----SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLS 541
++K +D V +Y V + GL G+ E+A +++ M+ + TY +++
Sbjct: 412 D--MQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQG 469
Query: 542 FCKERNIK 549
CK +K
Sbjct: 470 MCKAGKVK 477
Score = 132 bits (333), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 116/480 (24%), Positives = 217/480 (45%), Gaps = 26/480 (5%)
Query: 66 ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
AL F + R + F +++V+ ++ +F+ V + L +G T L
Sbjct: 56 ALDLFTHMVESRP-LPSIIDFTKLLNVIAKMK-KFDVVINLCDHLQIMGVSHDLYTCNLL 113
Query: 126 LRIYWRGEMYGMVLEAFDEMGRFGFTPN--TFAR--------NIVMDVLFKIGR-VDLGI 174
+ + + + +M + GF P+ TF N + + + + + V++GI
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173
Query: 175 KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
K P+ + + + +LCK V+ + M G P+V M+ L+N C G
Sbjct: 174 K-------PDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSG 226
Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
R +A LL M V + LID F + + A L+ +M++ +PN+ TYT
Sbjct: 227 RWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYT 286
Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
SLI GF A ++E++G PD+V + LI+ K DDA+ ++ + +
Sbjct: 287 SLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQK 346
Query: 355 KLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQA 411
L ++ T+ +L+ G+ ++ ++ + V ++ YN LL C G +A
Sbjct: 347 GLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKA 406
Query: 412 VKLYNTMLDK---GFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAI 468
+ ++ M + G P+ +++ LL GLC K+++A+ V++ + + +T I
Sbjct: 407 LMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTII 466
Query: 469 VDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAV 528
+ + +AG+ A+ LF + +VV+YT I GL G EA++L+ +MK V
Sbjct: 467 IQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 142/297 (47%), Gaps = 6/297 (2%)
Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
N +L +G L+ + A L+ MV++ P+++ +T L+ + K F + + D
Sbjct: 39 NYREILRNGLHSLQ-FNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDH 97
Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR 375
L+ G + DL N+L++C + A +++L PD TF SL++ CL R
Sbjct: 98 LQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNR 157
Query: 376 F----SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
S++ ++V + ++ D+V+Y ++ CK G N A+ L++ M + G PD +
Sbjct: 158 MEEAMSMVNQMV-EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYT 216
Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
L+ GLC + + +A ++ +G+ + A++D ++ G+ A +L+ I
Sbjct: 217 SLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRM 276
Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
++ +YT I G G +EA ++ M+ P+ Y ++ FCK + +
Sbjct: 277 SIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKV 333
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 70/158 (44%)
Query: 409 NQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAI 468
N+A+ L+ M++ P F LL + +K D IN+ + + + + + +
Sbjct: 54 NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113
Query: 469 VDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAV 528
++ ++ + + A + + + D+V++T I G G R EEA + +QM + +
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173
Query: 529 PPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
P+ Y ++ S CK ++ L + + I D
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPD 211
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/302 (20%), Positives = 125/302 (41%), Gaps = 19/302 (6%)
Query: 3 WRCKRSLFYTAQRTQILKTIISFKSIHQ--ISSPKVCATT---HQDFPIILAPHI-VHST 56
WR SL + +I +I+F ++ + K ++ + +AP+I +++
Sbjct: 228 WRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTS 287
Query: 57 LLN--CPSDLI--ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELAR 112
L+N C + A F + + + F DV ++ +I+ + + + I E+++
Sbjct: 288 LINGFCMEGCVDEARQMF-YLMETKGCFPDVVAYTSLINGFCKCK-KVDDAMKIFYEMSQ 345
Query: 113 VGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDL 172
G T+ ++ + + + E F M G PN N+++ L G+V
Sbjct: 346 KGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKK 405
Query: 173 GIKVLKETQ-------LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEI 225
+ + ++ Q PN ++N+ L LC + V M ++ + + I
Sbjct: 406 ALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTI 465
Query: 226 LLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
++ CK G++ A L + + G +V +T +I G R A L+ KM ++G
Sbjct: 466 IIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
Query: 286 CS 287
S
Sbjct: 526 VS 527
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/466 (24%), Positives = 220/466 (47%), Gaps = 60/466 (12%)
Query: 135 YGMVLEAF-------------DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ 181
+G+V++AF +M + G PN+ ++ L K RV+ +++L+E
Sbjct: 220 FGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMF 279
Query: 182 L----PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIA 237
L P+ +FN + LCK + ++ ++ M+ +GF P+ + L+N CK+GR+
Sbjct: 280 LMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVD 339
Query: 238 EAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN-GCSPNVVTYTSL 296
A L + + + LI GF RLD A + MV + G P+V TY SL
Sbjct: 340 AAKDLFYRI----PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSL 395
Query: 297 IKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
I G+ + + +A L + ++G P++ + +L+D K+G D+A +V + + L
Sbjct: 396 IYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGL 455
Query: 357 VPDSYTFCSLLSTVCLSGR-------FSLLPK------------LVCGL-EVE------- 389
P++ F L+S C R F +P+ L+ GL EV+
Sbjct: 456 KPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALW 515
Query: 390 -----------ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
A+ V YN L++ F + G +A KL N M+ +G D ++ L++GLC
Sbjct: 516 LLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLC 575
Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
A ++D+A ++++ ++ + A + +++ L +G +A++ + ++ D+V
Sbjct: 576 RAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIV 635
Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
++ I GL GR E+ ++ +++ +PP+ T+ ++ CK
Sbjct: 636 TFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCK 681
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/469 (24%), Positives = 211/469 (44%), Gaps = 8/469 (1%)
Query: 84 QSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFD 143
Q+ H +S R+ + ++ E+ +GCV A+TF + + + + +
Sbjct: 256 QTLIHSLSKCNRVNEALQ----LLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVN 311
Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSN 203
M GF P+ +M+ L KIGRVD + P + FN + + +
Sbjct: 312 RMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDD 371
Query: 204 VKDVIGMMVRK-GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLI 262
K V+ MV G P+V + L+ + K G + A ++L M G +V ++T+L+
Sbjct: 372 AKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILV 431
Query: 263 DGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHA 322
DGF +L ++D A + +M +G PN V + LI F + A + +G
Sbjct: 432 DGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCK 491
Query: 323 PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL 382
PD+ N LI L ++ AL + ++ +V ++ T+ +L++ G KL
Sbjct: 492 PDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKL 551
Query: 383 VCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCG 439
V + + D + YN+L+ C+AG ++A L+ ML G P N S L+ GLC
Sbjct: 552 VNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCR 611
Query: 440 ARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVS 499
+ ++EA+ + +V+ + ++++ L AGR + +FR+ E P D V+
Sbjct: 612 SGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVT 671
Query: 500 YTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
+ + L +GG +A +L + PN T+ ++L S + +
Sbjct: 672 FNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETL 720
Score = 157 bits (397), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 171/355 (48%), Gaps = 8/355 (2%)
Query: 98 GRFETVRGIVGEL-ARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
GR + + ++ ++ G V T+ + YW+ + G+ LE +M G PN ++
Sbjct: 367 GRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYS 426
Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
I++D K+G++D VL E PN + FN + CK + + ++ M
Sbjct: 427 YTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMP 486
Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
RKG P+V F L++ C++ I A LL MI+ G + + LI+ F R +
Sbjct: 487 RKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIK 546
Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
A L +MV G + +TY SLIKG A A S + + +GHAP + N+LI
Sbjct: 547 EARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILI 606
Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA-- 390
+ L + G ++A++ ++ PD TF SL++ +C +GR + L+ E
Sbjct: 607 NGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIP 666
Query: 391 -DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
D V +N L+S+ CK GF A L + ++ GF P++ ++ LL+ + +D
Sbjct: 667 PDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLD 721
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 137/596 (22%), Positives = 253/596 (42%), Gaps = 64/596 (10%)
Query: 57 LLNCPSDL-IALSFFIWCAKQRDYFHDVQSFDHMISVVTRL--TGRFETVRGIVGELARV 113
LL P ++ ++ F W Q Y H SFD ++ +L G F+T+ ++ ++
Sbjct: 84 LLELPLNVSTSMELFSWTGSQNGYRH---SFDVYQVLIGKLGANGEFKTIDRLLIQMKDE 140
Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGR-FGFTPNTFARNIVMDVLFKIGRVDL 172
G V K F+ +R Y + G EM + P + N+V+++L +
Sbjct: 141 GIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKV 200
Query: 173 GIKV----LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLN 228
V L P +F + + C +N++ + ++ M + G PN +++ L++
Sbjct: 201 AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIH 260
Query: 229 CFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSP 288
K R+ EA QLL M +G + +I G + R++ A + +M+ G +P
Sbjct: 261 SLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAP 320
Query: 289 NVVTY-------------------------------TSLIKGFMEAKMFSIAFSFL-DML 316
+ +TY +LI GF+ A + L DM+
Sbjct: 321 DDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMV 380
Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
S G PD+ +N LI K G AL+V + P+ Y++ L+ C G+
Sbjct: 381 TSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKI 440
Query: 377 SLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
++ + + + V +N L+S FCK +AV+++ M KG PD Y+F L
Sbjct: 441 DEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSL 500
Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
+ GLC +I A+ + + ++ N + +++ + G +A +L + +
Sbjct: 501 ISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGS 560
Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
PLD ++Y I+GL G ++A L+ +M P+ + +++ C+
Sbjct: 561 PLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCR-------SG 613
Query: 554 LLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD--EMWRKL 607
++++ ++ + E+ S T I F+ S +N L C G I D M+RKL
Sbjct: 614 MVEEAVEFQKEMVLRGS---TPDIVTFN---SLINGL---CRAGRIEDGLTMFRKL 660
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 163/386 (42%), Gaps = 29/386 (7%)
Query: 238 EAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLI 297
+ Y+LL L + + TS+ + +WT +G+R D+ L K+ NG + +
Sbjct: 80 QLYKLLELPLNVSTSMELFSWTGSQNGYRH--SFDVYQVLIGKLGANGEFKTIDRLLIQM 137
Query: 298 KG----FMEAKMFSIAFSF-------------LDMLESEGHAPDLVFHNVLIDCLSKMGS 340
K F E+ SI + L+M P +NV+++ L
Sbjct: 138 KDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNC 197
Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVC----LSGRFSLLPKLVCGLEVEADLVVYN 396
+ A +V+ +L K+ P +TF ++ C + SLL + V + V+Y
Sbjct: 198 HKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCV-PNSVIYQ 256
Query: 397 ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMN 456
L+ K N+A++L M G PD +F ++ GLC +I+EA + +++
Sbjct: 257 TLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIR 316
Query: 457 NPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEA 516
A + + +++ L + GR A LF R P ++V + I G + GR ++A
Sbjct: 317 GFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI---PKP-EIVIFNTLIHGFVTHGRLDDA 372
Query: 517 YILYSQM-KHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTK 575
+ S M + P+ TY ++ + KE + + +L D+ + + + ++ L
Sbjct: 373 KAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVD 432
Query: 576 FIFKFHSSSSAVNQLVEMCNLGLIPD 601
K A N L EM GL P+
Sbjct: 433 GFCKLGKIDEAYNVLNEMSADGLKPN 458
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/443 (23%), Positives = 210/443 (47%), Gaps = 9/443 (2%)
Query: 126 LRIYWRGEMYGMVLEAF---DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV---LKE 179
L+I+ R G +E+ + M R G+ P+ ++ F + + ++V L++
Sbjct: 93 LKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEK 152
Query: 180 TQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEA 239
P+ ++N + CK+N + + V+ M K F P+ + I++ C G++ A
Sbjct: 153 FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 212
Query: 240 YQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG 299
++L +++ +V +T+LI+ +D A L ++M+ G P++ TY ++I+G
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272
Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPD 359
+ M AF + LE +G PD++ +N+L+ L G +++ + + K P+
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332
Query: 360 SYTFCSLLSTVCLSGRFSL---LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYN 416
T+ L++T+C G+ L KL+ + D Y+ L++ FC+ G + A++
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 392
Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
TM+ G PD ++ +L LC K D+A+ ++ + + N+ + + L +G
Sbjct: 393 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452
Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYR 536
+A+ + + D ++Y I L G +EA+ L M+ P+ TY
Sbjct: 453 DKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYN 512
Query: 537 VMLLSFCKERNIKMVKRLLQDVI 559
++LL FCK I+ +L+ ++
Sbjct: 513 IVLLGFCKAHRIEDAINVLESMV 535
Score = 132 bits (332), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 189/420 (45%), Gaps = 49/420 (11%)
Query: 75 KQRDYFHDVQSFDHMI-SVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGE 133
+ +D+ D +++ MI S+ +R G+ + ++ +L C T+ + +
Sbjct: 185 RSKDFSPDTVTYNIMIGSLCSR--GKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEG 242
Query: 134 MYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFN 189
L+ DEM G P+ F N ++ + K G VD ++++ +L P+ +S+N
Sbjct: 243 GVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYN 302
Query: 190 IALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITL 249
I L L + ++ M + PNV + IL+ C+ G+I EA LL L
Sbjct: 303 ILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKL---- 358
Query: 250 GTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
M + G +P+ +Y LI F +A
Sbjct: 359 -------------------------------MKEKGLTPDAYSYDPLIAAFCREGRLDVA 387
Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
FL+ + S+G PD+V +N ++ L K G D AL+++ L E+ P+S ++ ++ S
Sbjct: 388 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSA 447
Query: 370 VCLSGR-----FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
+ SG +L + G ++ D + YN+++S C+ G ++A +L M F
Sbjct: 448 LWSSGDKIRALHMILEMMSNG--IDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFH 505
Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
P ++ +L G C A +I++AINV + +V N N +T +++ + AG +A++L
Sbjct: 506 PSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565
Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 171/366 (46%), Gaps = 39/366 (10%)
Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
+L E MV+ G +P+V+ T LIKGF + A +++LE G PD+ +N LI+
Sbjct: 110 HLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ-PDVFAYNALINGF 168
Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADL 392
KM DDA V D + PD+ T+ ++ ++C G+ L K++ L + +
Sbjct: 169 CKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTV 228
Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
+ Y L+ G ++A+KL + ML +G PD +++ ++RG+C +D A + +
Sbjct: 229 ITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRN 288
Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
+ + + + ++ L+ G+ + +L + EK +VV+Y++ I L G+
Sbjct: 289 LELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGK 348
Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI------------- 559
EEA L MK + P+AY+Y ++ +FC+E + + L+ +I
Sbjct: 349 IEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNT 408
Query: 560 -----------DARIEL---------DYHTSIRLTKFIFKFHSSSS--AVNQLVEMCNLG 597
D +E+ ++S T F + S A++ ++EM + G
Sbjct: 409 VLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNG 468
Query: 598 LIPDEM 603
+ PDE+
Sbjct: 469 IDPDEI 474
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 134/307 (43%), Gaps = 47/307 (15%)
Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL--LPKLVCGLEV-----E 389
+ G+Y ++L + + ++ PD +L T + G F+L +PK V +E+ +
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDV-----ILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ 155
Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
D+ YNAL++ FCK + A ++ + M K F+PD ++ ++ LC K+D A+ V
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 450 YQGIVMNN--PAV---------------------------------NAHVHTAIVDRLIE 474
++ +N P V + + I+ + +
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
G +A ++ R ++ DV+SY + +R LL G+ EE L ++M PN T
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 535 YRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMC 594
Y +++ + C++ I+ LL+ + + + D ++ L + A+ L M
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 595 NLGLIPD 601
+ G +PD
Sbjct: 396 SDGCLPD 402
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 120/485 (24%), Positives = 222/485 (45%), Gaps = 22/485 (4%)
Query: 86 FDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEM 145
F+ + S V R T +++ V G + G T + + Y R + +L AF +
Sbjct: 73 FNRLCSAVAR-TKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKK---LLFAFSVL 128
Query: 146 GR---FGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKL 198
GR G+ P+T + +++ GRV + ++++ Q P+ ++ + + LC
Sbjct: 129 GRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLK 188
Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
VS +I MV GF P+ + +LN CK G A A L M SV +
Sbjct: 189 GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQY 248
Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
+++ID + D A L+ +M G +VVTY+SLI G + L +
Sbjct: 249 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG 308
Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC------- 371
PD+V + LID K G +A ++Y+ ++ + PD+ T+ SL+ C
Sbjct: 309 RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHE 368
Query: 372 LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
+ F L+ C E D+V Y+ L++ +CKA + ++L+ + KG P+ ++
Sbjct: 369 ANQMFDLMVSKGC----EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYN 424
Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
L+ G C + K++ A ++Q +V + + ++D L + G +KA+++F +
Sbjct: 425 TLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKS 484
Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
+ L + Y + I G+ + ++A+ L+ + V P+ TY VM+ CK+ ++
Sbjct: 485 RMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA 544
Query: 552 KRLLQ 556
L +
Sbjct: 545 DMLFR 549
Score = 145 bits (366), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 188/413 (45%), Gaps = 39/413 (9%)
Query: 134 MYGMVLEAF---DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF----L 186
+ G V EA D M +GF P+ V++ L K G L + + ++ + N +
Sbjct: 187 LKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVV 246
Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
++I + +LCK + + M KG +V + L+ C G+ + ++L M
Sbjct: 247 QYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 306
Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
I V ++ LID F + +L A L+ +M+ G +P+ +TY SLI GF +
Sbjct: 307 IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCL 366
Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
A D++ S+G PD+V +++LI+ K DD + ++ + L+P++ T+
Sbjct: 367 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITY--- 423
Query: 367 LSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
N L+ FC++G N A +L+ M+ +G P
Sbjct: 424 -----------------------------NTLVLGFCQSGKLNAAKELFQEMVSRGVPPS 454
Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
++ LL GLC ++++A+ +++ + + + ++ I+ + A + A LF
Sbjct: 455 VVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFC 514
Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVML 539
+ DVV+Y V I GL + G EA +L+ +MK P+ +TY +++
Sbjct: 515 SLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 148/329 (44%), Gaps = 5/329 (1%)
Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
L+E M+Q+ P + + L K + + F +E G D+ ++I+C
Sbjct: 57 LFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYC 116
Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLV---CGLEVEADLV 393
+ A V +L PD+ TF +L++ CL GR S LV ++ DLV
Sbjct: 117 RKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLV 176
Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
+ L++ C G ++A+ L + M++ GF PD ++ +L LC + A+++++ +
Sbjct: 177 TVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM 236
Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
N + ++ ++D L + G A+ LF ++ DVV+Y+ I GL G+
Sbjct: 237 EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKW 296
Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
++ + +M + P+ T+ ++ F KE + K L ++I I D T L
Sbjct: 297 DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 356
Query: 574 TKFIFKFHSSSSAVNQLVE-MCNLGLIPD 601
K + A NQ+ + M + G PD
Sbjct: 357 IDGFCKENCLHEA-NQMFDLMVSKGCEPD 384
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 159 bits (402), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 100/449 (22%), Positives = 210/449 (46%), Gaps = 42/449 (9%)
Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALC 193
++ F +M + P+ N ++ + K+ + +L I + ++ Q + +++I +
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
C+ + +S V+ M++ G+ P++ LLN +C RI++A L+ M+ +G
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF------------- 300
+T LI G + A L ++MVQ GC P++VTY +++ G
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLL 246
Query: 301 --MEA--------------------KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
MEA + +A +E++G P++V +N LI+CL
Sbjct: 247 NKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNY 306
Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---VCGLEVEADLVVY 395
G + DA + +LE K+ P+ TF +L+ G+ KL + ++ D + Y
Sbjct: 307 GRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITY 366
Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
N L++ FC ++A +++ M+ K P+ ++ L+ G C +++++ + +++ +
Sbjct: 367 NLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQ 426
Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
N +T I+ +AG C A +F++ + + P D+++Y++ + GL G+ +
Sbjct: 427 RGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDT 486
Query: 516 AYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
A +++ ++ + N + Y M+ CK
Sbjct: 487 ALVIFKYLQKSEMELNIFIYNTMIEGMCK 515
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/425 (24%), Positives = 199/425 (46%), Gaps = 38/425 (8%)
Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
RN + D++ VDL ++K P+ + FN L + K+N V + M G
Sbjct: 55 RNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI 114
Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA-- 274
++ + I +NCFC+ +++ A +L M+ LG + + L++G+ +R+ A
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174
Query: 275 --------GY-------------------------LWEKMVQNGCSPNVVTYTSLIKGFM 301
GY L ++MVQ GC P++VTY +++ G
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
+ +A + L+ +E+ ++V N +ID L K + A+D++ + + P+
Sbjct: 235 KRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVV 294
Query: 362 TFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
T+ SL++ +C GR+S +L+ + ++ ++V +NAL+ F K G +A KL+ M
Sbjct: 295 TYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEM 354
Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
+ + PD ++ L+ G C ++DEA +++ +V + N + +++ + R
Sbjct: 355 IQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRV 414
Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
++LFR + V+YT I+G + G + A +++ QM VP + TY ++
Sbjct: 415 EDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSIL 474
Query: 539 LLSFC 543
L C
Sbjct: 475 LHGLC 479
Score = 153 bits (386), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 119/515 (23%), Positives = 231/515 (44%), Gaps = 23/515 (4%)
Query: 57 LLNCPSDLI----ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELAR 112
L N SD+I A+ F K R F + F+ ++S V ++ +FE V + ++
Sbjct: 54 LRNRLSDIIKVDDAVDLFGDMVKSRP-FPSIVEFNKLLSAVAKMN-KFELVISLGEQMQT 111
Query: 113 VGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDL 172
+G T+ +F+ + R + L +M + G+ P+ + +++ R+
Sbjct: 112 LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171
Query: 173 GIKVLKET----QLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLN 228
+ ++ + P+ +F + L N S ++ MV++G P++ + ++N
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 229 CFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSP 288
CK G I A LL M +V + +ID + R +++A L+ +M G P
Sbjct: 232 GLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRP 291
Query: 289 NVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVY 348
NVVTY SLI +S A L + + P++V N LID K G +A ++
Sbjct: 292 NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLH 351
Query: 349 DGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKA 405
+ +++ + PD+ T+ L++ C+ R + K + + ++ YN L++ FCK
Sbjct: 352 EEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKC 411
Query: 406 GFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVH 465
V+L+ M +G + ++ +++G A D A V++ +V N + +
Sbjct: 412 KRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTY 471
Query: 466 TAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKH 525
+ ++ L G+ A+ +F+ + L++ Y I G+ + G+ EA+ L+ +
Sbjct: 472 SILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL-- 529
Query: 526 IAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
++ P+ TY M+ C KRLLQ+ D
Sbjct: 530 -SIKPDVVTYNTMISGLCS-------KRLLQEADD 556
Score = 119 bits (299), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 165/350 (47%), Gaps = 7/350 (2%)
Query: 137 MVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK---ETQL-PNFLSFNIAL 192
+ ++ F EM G PN N +++ L GR ++L E ++ PN ++FN +
Sbjct: 276 VAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALI 335
Query: 193 CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTS 252
K + + + M+++ P+ + +L+N FC R+ EA Q+ M++
Sbjct: 336 DAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCL 395
Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
++ + LI+GF + +R++ L+ +M Q G N VTYT++I+GF +A A
Sbjct: 396 PNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMV 455
Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
+ S D++ +++L+ L G D AL ++ L + ++ + + + +++ +C
Sbjct: 456 FKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCK 515
Query: 373 SGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
+G+ L C L ++ D+V YN ++S C +A L+ M + G P++ ++
Sbjct: 516 AGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNT 575
Query: 433 LLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT-AIVDRLIEAGRCHKA 481
L+R R D A + M + T ++V ++ GR K+
Sbjct: 576 LIRA--NLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHDGRLDKS 623
Score = 110 bits (275), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 167/379 (44%), Gaps = 3/379 (0%)
Query: 224 EILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQ 283
EIL N + ++ +A L G M+ S+ + L+ ++ + ++ L E+M
Sbjct: 52 EILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQT 111
Query: 284 NGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDD 343
G S ++ TY+ I F S+A + L + G+ PD+V + L++ D
Sbjct: 112 LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171
Query: 344 ALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLS 400
A+ + D ++E+ PD++TF +L+ + L + S LV + + DLV Y +++
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
CK G + A+ L N M + F ++ LC R ++ A++++ +
Sbjct: 232 GLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRP 291
Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
N + ++++ L GR A +L + +K +VV++ I + G+ EA L+
Sbjct: 292 NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLH 351
Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKF 580
+M ++ P+ TY +++ FC + K++ + ++ + T L K
Sbjct: 352 EEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKC 411
Query: 581 HSSSSAVNQLVEMCNLGLI 599
V EM GL+
Sbjct: 412 KRVEDGVELFREMSQRGLV 430
Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 135/300 (45%), Gaps = 6/300 (2%)
Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
F DM++S P +V N L+ ++KM ++ + + + + L + D YT+ ++ C
Sbjct: 71 FGDMVKSRPF-PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFC 129
Query: 372 LSGRFSL----LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
+ SL L K++ L E D+V ++LL+ +C + + AV L + M++ G+ PD
Sbjct: 130 RRSQLSLALAVLAKMM-KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 188
Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
++F L+ GL K EA+ + +V + + +V+ L + G A+ L +
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNK 248
Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERN 547
+ +VV + I L + E A L+++M+ + PN TY ++ C
Sbjct: 249 MEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGR 308
Query: 548 IKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKL 607
RLL ++++ +I + T L FK A EM + PD + L
Sbjct: 309 WSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNL 368
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 118/278 (42%), Gaps = 38/278 (13%)
Query: 327 FHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKL---V 383
+ +L + LS + DDA+D++ +++ + P F LLS V +F L+ L +
Sbjct: 50 YREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM 109
Query: 384 CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
L + DL Y+ ++ FC+ + A+ + M+ G+ PD + LL G C +++I
Sbjct: 110 QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRI 169
Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
+A+ A+VD+++E G Y D ++T
Sbjct: 170 SDAV-------------------ALVDQMVEMG----------------YKPDTFTFTTL 194
Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
I GL + EA L QM P+ TY ++ CK +I + LL + ARI
Sbjct: 195 IHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARI 254
Query: 564 ELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
+ + + + K+ AV+ EM G+ P+
Sbjct: 255 KANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN 292
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 159 bits (402), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 123/492 (25%), Positives = 230/492 (46%), Gaps = 23/492 (4%)
Query: 65 IALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLL 124
+AL FF A + H +F+ MI + + G+ ++V+ ++ ++ G F+
Sbjct: 58 LALHFFKSIANSNLFKHTPLTFEVMIRKLA-MDGQVDSVQYLLQQMKLQGFHCSEDLFIS 116
Query: 125 FLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-- 182
+ +Y + + +E F + FG P+ N V+D L R+ + V ++ +
Sbjct: 117 VISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDG 176
Query: 183 --PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAY 240
PN ++N+ L LCK N V K ++ M KG P+ + +++ C++G + E
Sbjct: 177 FEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGR 236
Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
+L + V+ + LI+G + A L +MV+ G SPNV++Y++LI
Sbjct: 237 ELAERFEPV-----VSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVL 291
Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE-LKLVPD 359
+ +AFSFL + G P++ + L+ G+ DALD+++ ++ L P+
Sbjct: 292 CNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPN 351
Query: 360 SYTFCSLLSTVCLSGR-------FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAV 412
+ +L+ C G FS + ++ C ++ Y +L++ F K G + AV
Sbjct: 352 VVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCS----PNIRTYGSLINGFAKRGSLDGAV 407
Query: 413 KLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRL 472
++N ML G P+ + ++ LC K EA ++ + + N A + A + L
Sbjct: 408 YIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGL 467
Query: 473 IEAGRCHKAIQLFRRAIVE-KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
+AGR A ++FR+ + + P ++V+Y + GL + R EEAY L ++ V +
Sbjct: 468 CDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWS 527
Query: 532 AYTYRVMLLSFC 543
+ TY +L C
Sbjct: 528 SSTYNTLLHGSC 539
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 111/418 (26%), Positives = 180/418 (43%), Gaps = 44/418 (10%)
Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNI 190
Y E EM G +PN + + +++VL G+++L ++LK PN + +
Sbjct: 262 YKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLS- 320
Query: 191 ALCNLCKLNDVS-NVKDVIGMMVRK-GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
+L C L + + D+ M+R G PNV + L+ FC G I +A + M
Sbjct: 321 SLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEE 380
Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
+G S ++ + LI+GF + LD A Y+W KM+ +GC PNVV YT++++ F
Sbjct: 381 IGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKE 440
Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL-KLVPDSYTFCSLL 367
A S ++++ E AP + N I L G D A V+ + + + P+ T+ LL
Sbjct: 441 AESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELL 500
Query: 368 STVCLSGRFSL---LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
+ + R L + + VE YN LL C AG P A++L M+ G +
Sbjct: 501 DGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKS 560
Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
PD + ++ C K + A + L+ GR
Sbjct: 561 PDEITMNMIILAYCKQGKAERAAQMLD--------------------LVSCGR------- 593
Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
K+ DV+SYT I GL E+ IL +M + P+ T+ V++ F
Sbjct: 594 ------RKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCF 645
Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/454 (20%), Positives = 185/454 (40%), Gaps = 70/454 (15%)
Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGL 245
L+F + + L V +V+ ++ M +GF+ + +F +++ + ++G A ++
Sbjct: 77 LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 136
Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
+ G SV + ++D R+ M ++ M ++G PNV TY L+K +
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 196
Query: 306 FSIAFSFLDMLESEGHAPDLV------------------------------FHNVLIDCL 335
A L + ++G PD V +N LI+ L
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGL 256
Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR----FSLLP----------- 380
K Y A ++ ++E + P+ ++ +L++ +C SG+ FS L
Sbjct: 257 CKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNI 316
Query: 381 ------------------------KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYN 416
+++ G ++ ++V YN L+ FC G +AV +++
Sbjct: 317 YTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFS 376
Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
M + G +P+ ++ L+ G +D A+ ++ ++ + N V+T +V+ L
Sbjct: 377 HMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHS 436
Query: 477 RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI-AVPPNAYTY 535
+ +A L E V ++ I+GL + GR + A ++ QM+ PPN TY
Sbjct: 437 KFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTY 496
Query: 536 RVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
+L K I+ L +++ +E T
Sbjct: 497 NELLDGLAKANRIEEAYGLTREIFMRGVEWSSST 530
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/366 (20%), Positives = 138/366 (37%), Gaps = 81/366 (22%)
Query: 82 DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLR-IYWRGEMYGMVLE 140
+V S+ +I+V+ +G+ E + ++ + GC T ++ + RG + L+
Sbjct: 280 NVISYSTLINVLCN-SGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFD-ALD 337
Query: 141 AFDEMGR-FGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNL 195
+++M R FG PN A N ++ G + + V + PN ++ +
Sbjct: 338 LWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGF 397
Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
K + + M+ G PNV ++ ++ C+ + EA L+ +M + SV
Sbjct: 398 AKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSV 457
Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKM-VQNGCSPNVVTYTSLIKG--------------- 299
+ I G RLD A ++ +M Q+ C PN+VTY L+ G
Sbjct: 458 PTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTR 517
Query: 300 --FMEAKMFS------------------IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMG 339
FM +S IA + + +G +PD + N++I K G
Sbjct: 518 EIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQG 577
Query: 340 SYDDA---LDVY----------------------------DGLLELK------LVPDSYT 362
+ A LD+ DG++ L+ +VP T
Sbjct: 578 KAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIAT 637
Query: 363 FCSLLS 368
+ L++
Sbjct: 638 WSVLIN 643
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 97/228 (42%), Gaps = 10/228 (4%)
Query: 82 DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
+V + +M+ + R + +F+ ++ +++ C TF F++ +
Sbjct: 421 NVVVYTNMVEALCRHS-KFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKV 479
Query: 142 FDEM-GRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF----LSFNIALCNLC 196
F +M + PN N ++D L K R++ + +E + ++N L C
Sbjct: 480 FRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSC 539
Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL--- 253
++G M+ G P+ +++ +CK G+ A Q+L L ++ G
Sbjct: 540 NAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDL-VSCGRRKWRP 598
Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
V ++T +I G R + L E+M+ G P++ T++ LI F+
Sbjct: 599 DVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFI 646
Score = 42.4 bits (98), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 68/175 (38%), Gaps = 39/175 (22%)
Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
+F ++R L ++D + Q + + + + +++ + G +A+++F R
Sbjct: 78 TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR- 136
Query: 489 IVEKYPLD--VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
++++ D V Y + LL R + Y++Y MK PN +TY V+L + CK
Sbjct: 137 -IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNN 195
Query: 547 NIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
+ K+LL VEM N G PD
Sbjct: 196 KVDGAKKLL-----------------------------------VEMSNKGCCPD 215
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 117/476 (24%), Positives = 219/476 (46%), Gaps = 9/476 (1%)
Query: 135 YGMVLE---AFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG----IKVLKETQLPNFLS 187
+G+V E + EM PN + N +++ K+G V+ K+++ P+F +
Sbjct: 196 FGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFT 255
Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
+ + C+ D+ + V M KG N + L++ C RI EA L M
Sbjct: 256 YTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMK 315
Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
+V +TVLI R A L ++M + G PN+ TYT LI F
Sbjct: 316 DDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFE 375
Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
A L + +G P+++ +N LI+ K G +DA+DV + + KL P++ T+ L+
Sbjct: 376 KARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELI 435
Query: 368 STVCLSGRFSLLPKLVCGLE--VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTP 425
C S + L LE V D+V YN+L+ C++G + A +L + M D+G P
Sbjct: 436 KGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVP 495
Query: 426 DNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLF 485
D +++ ++ LC +++++EA +++ + N ++TA++D +AG+ +A +
Sbjct: 496 DQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLML 555
Query: 486 RRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE 545
+ + + + +++ I GL G+ +EA +L +M I + P T +++ K+
Sbjct: 556 EKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKD 615
Query: 546 RNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
+ Q ++ + + D HT + + A + + +M G+ PD
Sbjct: 616 GDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPD 671
Score = 156 bits (394), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 114/461 (24%), Positives = 209/461 (45%), Gaps = 8/461 (1%)
Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP----NFLSFNIALCNLCKLNDVSNV 204
G P+ F ++ + +D KV E L N +++ + LC +
Sbjct: 248 GLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEA 307
Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
D+ M +P VR + +L+ C R +EA L+ M G +++ +TVLID
Sbjct: 308 MDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDS 367
Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
+ + A L +M++ G PNV+TY +LI G+ + M A ++++ES +P+
Sbjct: 368 LCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPN 427
Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVC 384
+N LI K + A+ V + +LE K++PD T+ SL+ C SG F +L+
Sbjct: 428 TRTYNELIKGYCKSNVHK-AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLS 486
Query: 385 GLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
+ D Y +++ CK+ +A L++++ KG P+ + L+ G C A
Sbjct: 487 LMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAG 546
Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYT 501
K+DEA + + ++ N N+ A++ L G+ +A L + + V + T
Sbjct: 547 KVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDT 606
Query: 502 VAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDA 561
+ I LL+ G + AY + QM P+A+TY + ++C+E + + ++ + +
Sbjct: 607 ILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMREN 666
Query: 562 RIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
+ D T L K ++ A + L M + G P +
Sbjct: 667 GVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQ 707
Score = 122 bits (307), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 111/461 (24%), Positives = 201/461 (43%), Gaps = 31/461 (6%)
Query: 76 QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
+R DV +++ +I R +G F++ ++ + G V T+ + + +
Sbjct: 455 ERKVLPDVVTYNSLIDGQCR-SGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRV 513
Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLG----IKVLKETQLPNFLSFNIA 191
+ FD + + G PN ++D K G+VD K+L + LPN L+FN
Sbjct: 514 EEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNAL 573
Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
+ LC + + MV+ G P V IL++ K G AY M++ GT
Sbjct: 574 IHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGT 633
Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
+ +T I + R RL A + KM +NG SP++ TY+SLIKG+ + + AF
Sbjct: 634 KPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFD 693
Query: 312 FLDMLESEGHAP------DLVFHNVLID------------CLSKMGSYDDALDVYDGLLE 353
L + G P L+ H + + +S M +D +++ + ++E
Sbjct: 694 VLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVE 753
Query: 354 LKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE----VEADLVVYNALLSYFCKAGFPN 409
+ P++ ++ L+ +C G + K+ ++ + +V+NALLS CK N
Sbjct: 754 HSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHN 813
Query: 410 QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
+A K+ + M+ G P S L+ GL + + +V+Q ++ + I+
Sbjct: 814 EAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIII 873
Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
D + + G +LF ++EK S T ++ L+EG
Sbjct: 874 DGVGKQGLVEAFYELFN--VMEKNGCKFSSQTYSL--LIEG 910
Score = 99.4 bits (246), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 92/421 (21%), Positives = 173/421 (41%), Gaps = 26/421 (6%)
Query: 145 MGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLND 200
M G P+ + ++D L K RV+ + + PN + + + CK
Sbjct: 488 MNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGK 547
Query: 201 VSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTV 260
V ++ M+ K PN F L++ C G++ EA L M+ +G +V+ T+
Sbjct: 548 VDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTI 607
Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
LI + D A +++M+ +G P+ TYT+ I+ + A + + G
Sbjct: 608 LIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENG 667
Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC--LSGRFSL 378
+PDL ++ LI +G + A DV + + P +TF SL+ + G+
Sbjct: 668 VSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKG 727
Query: 379 LPKLVCGLE--VEADLVV-----------------YNALLSYFCKAGFPNQAVKLYNTML 419
+C + +E D VV Y L+ C+ G A K+++ M
Sbjct: 728 SEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQ 787
Query: 420 -DKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
++G +P F LL C +K +EA V ++ ++ L + G
Sbjct: 788 RNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEK 847
Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
+ +F+ + Y D +++ + I G+ + G E Y L++ M+ ++ TY ++
Sbjct: 848 ERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLL 907
Query: 539 L 539
+
Sbjct: 908 I 908
Score = 94.0 bits (232), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 144/339 (42%), Gaps = 39/339 (11%)
Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTY--------------- 293
L L + + L++ R +D ++ +M+++ PN+ TY
Sbjct: 177 LKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEE 236
Query: 294 --------------------TSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
TSLI G+ + K AF + + +G + V + LI
Sbjct: 237 ANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIH 296
Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEA 390
L D+A+D++ + + + P T+ L+ ++C S R S LV +E ++
Sbjct: 297 GLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKP 356
Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
++ Y L+ C +A +L ML+KG P+ ++ L+ G C I++A++V
Sbjct: 357 NIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVV 416
Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
+ + + N + ++ ++ HKA+ + + + K DVV+Y I G
Sbjct: 417 ELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRS 475
Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
G + AY L S M + P+ +TY M+ S CK + ++
Sbjct: 476 GNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVE 514
Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 101/230 (43%), Gaps = 14/230 (6%)
Query: 375 RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
RF L KL+ G YN LL+ + G ++ ++Y ML+ P+ Y++ ++
Sbjct: 174 RFELKYKLIIG--------CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMV 225
Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
G C ++EA IV + +T+++ + A ++F ++
Sbjct: 226 NGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCR 285
Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
+ V+YT I GL R +EA L+ +MK P TY V++ S C L
Sbjct: 286 RNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNL 345
Query: 555 LQDVIDARIELDYHTSIRLTKFI---FKFHSSSSAVNQLVEMCNLGLIPD 601
++++ + I+ + HT L + KF + + Q++E GL+P+
Sbjct: 346 VKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEK---GLMPN 392
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/477 (25%), Positives = 212/477 (44%), Gaps = 35/477 (7%)
Query: 114 GCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVL------FKI 167
GC + F + Y + + +M + G P NI++ +
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNC 426
Query: 168 GRVDLGIKVLKETQLP-------NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV 220
+DL K E N SF LC+ K +V I M+ +GF P+
Sbjct: 427 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSV---IREMIGQGFIPDT 483
Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
+ +LN C ++ A+ L M G V +T+++D F + ++ A + +
Sbjct: 484 STYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNE 543
Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
M + GC+PNVVTYT+LI +++AK S A + + SEG P++V ++ LID K G
Sbjct: 544 MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 603
Query: 341 YDDALDVYDGLLELKLVPD----------------SYTFCSLLSTVCLSGRFSLLPKLVC 384
+ A +++ + K VPD T+ +LL C S R KL+
Sbjct: 604 VEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLD 663
Query: 385 GLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGAR 441
+ +E + +VY+AL+ CK G ++A ++ M + GF Y++ L+ +
Sbjct: 664 AMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVK 723
Query: 442 KIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYT 501
+ D A V ++ N+ A N ++T ++D L + G+ +A +L + + +VV+YT
Sbjct: 724 RQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYT 783
Query: 502 VAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
I G G+ E L +M V PN TYRV++ CK + + LL+++
Sbjct: 784 AMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 133/649 (20%), Positives = 246/649 (37%), Gaps = 89/649 (13%)
Query: 61 PSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQ 120
PS +I SFF+W +Q Y H ++ ++ ++ R + + ++ + +
Sbjct: 145 PSAVI--SFFVWAGRQIGYKHTAPVYNALVDLIVRDDDE-KVPEEFLQQIRDDDKEVFGE 201
Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET 180
+ +R + R + + LE + F F P+ N ++ K R+D + +E
Sbjct: 202 FLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREM 261
Query: 181 QLPNFLSFNIAL-CNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEA 239
L N L C L V ++ + ++ + F P+ + L++ C+ EA
Sbjct: 262 SLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEA 321
Query: 240 YQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKG 299
L M +V ++ L+ G ++L + M+ GC P+ + SL+
Sbjct: 322 MDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHA 381
Query: 300 FMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID-------------------------- 333
+ + S A+ L + GH P V +N+LI
Sbjct: 382 YCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLA 441
Query: 334 ---------------CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGR--- 375
CL G Y+ A V ++ +PD+ T+ +L+ +C + +
Sbjct: 442 AGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMEL 501
Query: 376 -FSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
F L ++ G V AD+ Y ++ FCKAG QA K +N M + G TP+ ++ L+
Sbjct: 502 AFLLFEEMKRGGLV-ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 560
Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
A+K+ A +++ ++ N ++A++D +AG+ KA Q+F R K
Sbjct: 561 HAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDV 620
Query: 495 LD----------------VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
D VV+Y + G + R EEA L M PN Y +
Sbjct: 621 PDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDAL 680
Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGL 598
+ CK + + + ++ + +T L FK A L +M
Sbjct: 681 IDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSC 740
Query: 599 IP------------------DEMWRKLGLLSDETMTP-----VSLFDGF 624
P DE ++ + ++ ++ P ++ DGF
Sbjct: 741 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/521 (22%), Positives = 224/521 (42%), Gaps = 31/521 (5%)
Query: 108 GELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKI 167
E+ G V+ F R Y EM GF P+T + V++ L
Sbjct: 437 SEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNA 496
Query: 168 GRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMF 223
+++L + +E + + + ++ I + + CK + + M G PNV +
Sbjct: 497 SKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTY 556
Query: 224 EILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMV- 282
L++ + K +++ A +L M++ G ++ ++ LIDG + +++ A ++E+M
Sbjct: 557 TALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCG 616
Query: 283 ---------------QNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
N PNVVTY +L+ GF ++ A LD + EG P+ +
Sbjct: 617 SKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIV 676
Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL- 386
++ LID L K+G D+A +V + E YT+ SL+ R L K++ +
Sbjct: 677 YDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 736
Query: 387 --EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
++V+Y ++ CK G ++A KL M +KG P+ ++ ++ G KI+
Sbjct: 737 ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIE 796
Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
+ + + + A N + ++D + G A L +P ++T
Sbjct: 797 TCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWP----THTAGY 852
Query: 505 RGLLEGGRTE--EAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
R ++EG E E+ L ++ P YR+++ + K + ++M RLL++V
Sbjct: 853 RKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFS 912
Query: 563 IEL-DYHTSIR-LTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
L DY ++ L + + + +A EM G+IP+
Sbjct: 913 ATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPE 953
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 117/535 (21%), Positives = 225/535 (42%), Gaps = 76/535 (14%)
Query: 53 VHSTLLN--CPSDLIALSFFIWCAKQRD-YFHDVQSFDHMISVVTRLTGRFETVRGIVGE 109
+S +LN C + + L+F ++ +R DV ++ M+ + G E R E
Sbjct: 485 TYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCK-AGLIEQARKWFNE 543
Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
+ VGC T+ + Y + + E F+ M G PN + ++D K G+
Sbjct: 544 MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 603
Query: 170 VDLGIKVLKE--------------------TQLPNFLSFNIALCNLCKLNDVSNVKDVIG 209
V+ ++ + ++ PN +++ L CK + V + ++
Sbjct: 604 VEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLD 663
Query: 210 MMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLR 269
M +G PN +++ L++ CK+G++ EA ++ M G ++ ++ LID + +++
Sbjct: 664 AMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVK 723
Query: 270 RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHN 329
R D+A + KM++N C+PNVV YT +I G + A+ + M+E +G P++V +
Sbjct: 724 RQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYT 783
Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE 389
+ID +G + L++ + + + P
Sbjct: 784 AMIDGFGMIGKIETCLELLERMGSKGVAP------------------------------- 812
Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
+ V Y L+ + CK G + A L M + + ++ G ++ E++ +
Sbjct: 813 -NYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGL 869
Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
I ++ A V+ ++D LI+A R A++L V + +V Y+ L+E
Sbjct: 870 LDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEE--VATFSATLVDYSSTYNSLIE 927
Query: 510 ----GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKE-----RNIKMVKRLL 555
+ E A+ L+S+M V P + SFC RN K+ + LL
Sbjct: 928 SLCLANKVETAFQLFSEMTKKGVIPE-------MQSFCSLIKGLFRNSKISEALL 975
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/438 (24%), Positives = 204/438 (46%), Gaps = 20/438 (4%)
Query: 130 WRGEMYGMVLEAFDEMGRF-------------GFTPNTFARNIVMDVLFKIGRVDLG--- 173
W Y +V+ ++GR G+TP+ + + V++ + G +D
Sbjct: 244 WNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKL 303
Query: 174 IKVLKETQL-PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCK 232
I+V+K L PN + + LC++ ++ ++ M+R+G P+ ++ L++ FCK
Sbjct: 304 IEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 363
Query: 233 MGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVT 292
G I A + M + + V +T +I GF ++ + AG L+ +M G P+ VT
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 423
Query: 293 YTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
+T LI G+ +A AF + + G +P++V + LID L K G D A ++ +
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 353 ELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPN 409
++ L P+ +T+ S+++ +C SG KLV E + AD V Y L+ +CK+G +
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 543
Query: 410 QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
+A ++ ML KG P +F L+ G C +++ + ++ A NA ++V
Sbjct: 544 KAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
+ A +++ D +Y ++G + +EA+ L+ +MK
Sbjct: 604 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFS 663
Query: 530 PNAYTYRVMLLSFCKERN 547
+ TY V++ F K +
Sbjct: 664 VSVSTYSVLIKGFLKRKK 681
Score = 139 bits (350), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 110/504 (21%), Positives = 212/504 (42%), Gaps = 38/504 (7%)
Query: 77 RDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFL-RIYWRGEMY 135
+D+ D + FD V+ G R + ++ G V+ + ++L R+
Sbjct: 169 KDWGSDPRVFDVFFQVLVDF-GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKT 227
Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIA 191
+ F E G N + NIV+ + ++GR+ +L +L P+ +S++
Sbjct: 228 ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV 287
Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
+ C+ ++ V +I +M RKG PN ++ ++ C++ ++AEA + MI G
Sbjct: 288 VNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 347
Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
+T LIDGF + + A + +M +P+V+TYT++I GF + A
Sbjct: 348 LPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK 407
Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
+ +G PD V LI+ K G DA V++ +++ P+
Sbjct: 408 LFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN------------ 455
Query: 372 LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
+V Y L+ CK G + A +L + M G P+ +++
Sbjct: 456 --------------------VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYN 495
Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
++ GLC + I+EA+ + + +T ++D ++G KA ++ + + +
Sbjct: 496 SIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK 555
Query: 492 KYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMV 551
+V++ V + G G E+ L + M + PNA T+ ++ +C N+K
Sbjct: 556 GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAA 615
Query: 552 KRLLQDVIDARIELDYHTSIRLTK 575
+ +D+ + D T L K
Sbjct: 616 TAIYKDMCSRGVGPDGKTYENLVK 639
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 168/391 (42%), Gaps = 4/391 (1%)
Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR-LRRLD 272
K + + R+F++ G + EA ++ M+ G LSV++ V + + +
Sbjct: 169 KDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTA 228
Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
A ++ + + G NV +Y +I + A L ++E +G+ PD++ ++ ++
Sbjct: 229 TAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVV 288
Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA-- 390
+ + G D + + + L P+SY + S++ +C + + + + +
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348
Query: 391 -DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
D VVY L+ FCK G A K + M + TPD ++ ++ G C + EA +
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLE 509
+ + ++ T +++ +AG A ++ I +VV+YT I GL +
Sbjct: 409 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468
Query: 510 GGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHT 569
G + A L +M I + PN +TY ++ CK NI+ +L+ + A + D T
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 570 SIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
L K A L EM GL P
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQP 559
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 106/228 (46%), Gaps = 4/228 (1%)
Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLSFNIALCNL---- 195
E EM + G PN F N +++ L K G ++ +K++ E + + + L
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536
Query: 196 CKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSV 255
CK ++ ++++ M+ KG P + F +L+N FC G + + +LL M+ G + +
Sbjct: 537 CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 596
Query: 256 NAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDM 315
+ L+ + L A +++ M G P+ TY +L+KG +A+ A+
Sbjct: 597 TTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQE 656
Query: 316 LESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
++ +G + + ++VLI K + +A +V+D + L D F
Sbjct: 657 MKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 85.9 bits (211), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 7/232 (3%)
Query: 136 GMVLEAFDEMGRF---GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSF 188
G + EA +G F G +T +MD K G +D ++LKE P ++F
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564
Query: 189 NIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT 248
N+ + C + + + ++ M+ KG PN F L+ +C + A + M +
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624
Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
G + L+ G + R + A +L+++M G S +V TY+ LIKGF++ K F
Sbjct: 625 RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 684
Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
A D + EG A D + D K D +D D ++E LV +
Sbjct: 685 AREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLVDEQ 736
Score = 76.3 bits (186), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 107/235 (45%), Gaps = 3/235 (1%)
Query: 370 VCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
VC GR L+ +E++ D++ Y+ +++ +C+ G ++ KL M KG P+
Sbjct: 256 VCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPN 315
Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
+Y + ++ LC K+ EA + ++ + V+T ++D + G A + F
Sbjct: 316 SYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFY 375
Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
DV++YT I G + G EA L+ +M + P++ T+ ++ +CK
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAG 435
Query: 547 NIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
++K R+ +I A + T L + K SA L EM +GL P+
Sbjct: 436 HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/474 (23%), Positives = 209/474 (44%), Gaps = 76/474 (16%)
Query: 175 KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
++++ LP+ + F+ + + + V D + G N+ I++NCFC+
Sbjct: 78 EMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCC 137
Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
+ AY +LG ++ LG + LI G ++ A L ++MV+NGC P+VVTY
Sbjct: 138 KTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYN 197
Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
S++ G + S+A L +E D+ ++ +ID L + G D A+ ++ +
Sbjct: 198 SIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK 257
Query: 355 KLVPDSYTFCSLLSTVCLSGRF---SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQA 411
+ T+ SL+ +C +G++ +LL K + E+ +++ +N LL F K G +A
Sbjct: 258 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317
Query: 412 VKLYNTMLDKGFTP---------DNY--------------------------SFVGLLRG 436
+LY M+ +G +P D Y +F L++G
Sbjct: 318 NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 377
Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV--------------------------- 469
C +++D+ + V++ I NA ++ +V
Sbjct: 378 YCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPD 437
Query: 470 --------DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYS 521
D L + G+ KA+++F K L +V YT I G+ +GG+ E+A+ L+
Sbjct: 438 VMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFC 497
Query: 522 QMKHIAVPPNAYTYRVMLLSFCKERNI---KMVKRLLQDVIDARIELDYHTSIR 572
+ V PN TY VM+ CK+ ++ ++ R +++ +A + Y+T IR
Sbjct: 498 SLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 551
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 125/556 (22%), Positives = 246/556 (44%), Gaps = 26/556 (4%)
Query: 15 RTQILKTIISF-----KSIHQISSPKVCATTHQDFPIILAPHIVHSTLLNCPSDLIALSF 69
RT +L TI SF + IS+ VC + S +++ D A++
Sbjct: 28 RTDLLCTISSFFSSCERDFSSISNGNVCFRER-----------LRSGIVDIKKD-DAIAL 75
Query: 70 FIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIY 129
F + R + F S + R T +F V +L G T + + +
Sbjct: 76 FQEMIRSRP-LPSLVDFSRFFSAIAR-TKQFNLVLDFCKQLELNGIAHNIYTLNIMINCF 133
Query: 130 WRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNF 185
R ++ + G+ P+T N ++ LF G+V + ++++ P+
Sbjct: 134 CRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDV 193
Query: 186 LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGL 245
+++N + +C+ D S D++ M + +V + +++ C+ G I A L
Sbjct: 194 VTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKE 253
Query: 246 MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
M T G SV + L+ G + + + L + MV PNV+T+ L+ F++
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 313
Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
A + + G +P+++ +N L+D +A ++ D ++ K PD TF S
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 373
Query: 366 LLSTVCLSGRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
L+ C+ R K+ + + A+ V Y+ L+ FC++G A +L+ M+ G
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433
Query: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI 482
PD ++ LL GLC K+++A+ +++ + + + ++T I++ + + G+ A
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 493
Query: 483 QLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
LF + +V++YTV I GL + G EA IL +M+ PN TY ++ +
Sbjct: 494 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH 553
Query: 543 CKERNIKMVKRLLQDV 558
++ ++ +L++++
Sbjct: 554 LRDGDLTASAKLIEEM 569
Score = 136 bits (342), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 103/439 (23%), Positives = 198/439 (45%), Gaps = 8/439 (1%)
Query: 79 YFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMV 138
Y D +F+ +I + L G+ +V + GC T+ + R +
Sbjct: 154 YEPDTTTFNTLIKGLF-LEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 212
Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCN 194
L+ +M + F + ++D L + G +D I + KE + + +++N +
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272
Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
LCK ++ ++ MV + PNV F +LL+ F K G++ EA +L MIT G S +
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332
Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
+ + L+DG+ RL A + + MV+N CSP++VT+TSLIKG+ K
Sbjct: 333 IITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFR 392
Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
+ G + V +++L+ + G A +++ ++ ++PD T+ LL +C +G
Sbjct: 393 NISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNG 452
Query: 375 RFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFV 431
+ ++ L+ ++ +V+Y ++ CK G A L+ ++ KG P+ ++
Sbjct: 453 KLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYT 512
Query: 432 GLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVE 491
++ GLC + EA + + + + A N + ++ + G + +L
Sbjct: 513 VMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSC 572
Query: 492 KYPLDVVSYTVAIRGLLEG 510
+ D S + I LL G
Sbjct: 573 GFSADASSIKMVIDMLLSG 591
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 150/310 (48%), Gaps = 5/310 (1%)
Query: 270 RLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHN 329
+ D A L+++M+++ P++V ++ K F++ F LE G A ++ N
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 330 VLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS----LLPKLVCG 385
++I+C + A V +++L PD+ TF +L+ + L G+ S L+ ++V
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 386 LEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
+ D+V YN++++ C++G + A+ L M ++ D +++ ++ LC ID
Sbjct: 188 -GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 246
Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
AI++++ + + + ++V L +AG+ + L + + + +V+++ V +
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Query: 506 GLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIEL 565
++ G+ +EA LY +M + PN TY ++ +C + + +L ++ +
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366
Query: 566 DYHTSIRLTK 575
D T L K
Sbjct: 367 DIVTFTSLIK 376
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 107/242 (44%), Gaps = 14/242 (5%)
Query: 82 DVQSFDHMIS---VVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMV 138
D+ +F +I +V R+ + R I ++ G V A T+ + ++ + + +
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNI----SKRGLVANAVTYSILVQGFCQSGKIKLA 422
Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF----LSFNIALCN 194
E F EM G P+ I++D L G+++ +++ ++ Q + + +
Sbjct: 423 EELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEG 482
Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
+CK V + ++ + KG PNV + ++++ CK G ++EA LL M G + +
Sbjct: 483 MCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPN 542
Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
+ LI R L + L E+M G S + + +I + ++ SFLD
Sbjct: 543 DCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGELDK---SFLD 599
Query: 315 ML 316
ML
Sbjct: 600 ML 601
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 108/263 (41%), Gaps = 38/263 (14%)
Query: 342 DDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNAL 398
DDA+ ++ ++ + +P F S + + +F+L+ LE+ ++ N +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 399 LSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNP 458
++ FC+ A + ++ G+ PD +F L++GL K+ EA+
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAV----------- 178
Query: 459 AVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
+VDR++E G C DVV+Y + G+ G T A
Sbjct: 179 --------VLVDRMVENG-CQP---------------DVVTYNSIVNGICRSGDTSLALD 214
Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIF 578
L +M+ V + +TY ++ S C++ I L +++ I+ T L + +
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Query: 579 KFHSSSSAVNQLVEMCNLGLIPD 601
K + L +M + ++P+
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPN 297
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 130/562 (23%), Positives = 243/562 (43%), Gaps = 24/562 (4%)
Query: 66 ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
A+ FF + + R ++ V + +I V R+ R + + ++ + +F +
Sbjct: 90 AIDFFDYMVRSRPFYTAVDC-NKVIGVFVRMN-RPDVAISLYRKMEIRRIPLNIYSFNIL 147
Query: 126 LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKV---LKETQL 182
++ + L F ++ + GF P+ N ++ L R+ + + + ET
Sbjct: 148 IKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGF 207
Query: 183 ----------------PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEIL 226
P ++FN + LC V ++ MV KG + +V + +
Sbjct: 208 LEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTI 267
Query: 227 LNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGC 286
+N CKMG A LL M V ++ +ID + A YL+ +M++ G
Sbjct: 268 VNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI 327
Query: 287 SPNVVTYTSLIKGFMEAKMFSIAFSFL-DMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL 345
+PNV TY +I GF +S A L DM+E E + PD++ N LI K G +A
Sbjct: 328 APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREIN-PDVLTFNALISASVKEGKLFEAE 386
Query: 346 DVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKA 405
+ D +L + PD+ T+ S++ C RF K + L D+V +N ++ +C+A
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDD-AKHMFDLMASPDVVTFNTIIDVYCRA 445
Query: 406 GFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVH 465
++ ++L + +G + ++ L+ G C ++ A +++Q ++ + +
Sbjct: 446 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITC 505
Query: 466 TAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKH 525
++ E + +A++LF + K LD V+Y + I G+ +G + +EA+ L+ +
Sbjct: 506 NILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPI 565
Query: 526 IAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSS 585
V P+ TY VM+ FC + I L + D E D T L + K
Sbjct: 566 HGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDK 625
Query: 586 AVNQLVEMCNLGLIPDEMWRKL 607
++ + EM + G D K+
Sbjct: 626 SIELISEMRSNGFSGDAFTIKM 647
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 159/347 (45%), Gaps = 12/347 (3%)
Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK---ETQL-PNFLSFNIALCNLCK 197
F EM G PN F N ++D GR ++L+ E ++ P+ L+FN + K
Sbjct: 319 FSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVK 378
Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
+ + + M+ + +P+ + ++ FCK R +A + LM S V
Sbjct: 379 EGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVT 434
Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
+ +ID + R +R+D L ++ + G N TY +LI GF E + A +
Sbjct: 435 FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 494
Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
S G PD + N+L+ + ++AL++++ + K+ D+ + ++ +C +
Sbjct: 495 SHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVD 554
Query: 378 LLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
L C L VE D+ YN ++S FC + A L++ M D G PDN ++ L+
Sbjct: 555 EAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 614
Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKA 481
RG A +ID++I + + N + +A + D LI GR K+
Sbjct: 615 RGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD-LITDGRLDKS 660
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/435 (23%), Positives = 194/435 (44%), Gaps = 29/435 (6%)
Query: 134 MYGMVLEA---FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL---KETQL-PNFL 186
+ G VLEA ++M G + +++ + K+G + +L +ET + P+ +
Sbjct: 238 LEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVV 297
Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
++ + LCK S+ + + M+ KG PNV + +++ FC GR ++A +LL M
Sbjct: 298 IYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDM 357
Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
I + V + LI + +L A L ++M+ P+ VTY S+I GF + F
Sbjct: 358 IEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRF 417
Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
A D++ S PD+V N +ID + D+ + + + LV ++ T+ +L
Sbjct: 418 DDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 473
Query: 367 LSTVC----LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
+ C L+ L +++ V D + N LL FC+ +A++L+ +
Sbjct: 474 IHGFCEVDNLNAAQDLFQEMI-SHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 532
Query: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI 482
D ++ ++ G+C K+DEA +++ + ++ + + ++ A
Sbjct: 533 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN 592
Query: 483 QLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
LF + + D +Y IRG L+ G +++ L S+M+ +A+T
Sbjct: 593 VLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT-------- 644
Query: 543 CKERNIKMVKRLLQD 557
IKMV L+ D
Sbjct: 645 -----IKMVADLITD 654
Score = 96.3 bits (238), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 159/378 (42%), Gaps = 30/378 (7%)
Query: 261 LIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEG 320
L G + LD A ++ MV++ V +I F+ +A S +E
Sbjct: 77 LKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRR 136
Query: 321 HAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
++ N+LI C +L + L +L PD TF +LL +CL R S
Sbjct: 137 IPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRIS--- 193
Query: 381 KLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGA 440
EA AL Y + GF +AV L++ M++ G TP +F L+ GLC
Sbjct: 194 --------EA-----LALFGYMVETGFL-EAVALFDQMVEIGLTPVVITFNTLINGLCLE 239
Query: 441 RKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSY 500
++ EA + +V ++ + IV+ + + G A+ L + DVV Y
Sbjct: 240 GRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIY 299
Query: 501 TVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVID 560
+ I L + G +A L+S+M + PN +TY M+ FC +RLL+D+I+
Sbjct: 300 SAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE 359
Query: 561 ARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGLLSDETMTPVSL 620
I D + F++ SA + ++ + DEM + + +T+T S+
Sbjct: 360 REINPD----------VLTFNALISASVKEGKLFEAEKLCDEMLHR--CIFPDTVTYNSM 407
Query: 621 FDGFVPCERRAGNANHLL 638
GF R +A H+
Sbjct: 408 IYGFCK-HNRFDDAKHMF 424
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 203/444 (45%), Gaps = 7/444 (1%)
Query: 122 FLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVL 177
F + + +G ++ F +M G PN N V+D L GR D K++
Sbjct: 276 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV 335
Query: 178 KETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIA 237
+ P ++++I + L + + + V+ M +KGF PNV ++ L++ F + G +
Sbjct: 336 ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLN 395
Query: 238 EAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLI 297
+A ++ LM++ G SL+ + + LI G+ + + D A L ++M+ G + N ++TS+I
Sbjct: 396 KAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 455
Query: 298 KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
MF A F+ + +P LI L K G + AL+++ L V
Sbjct: 456 CLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFV 515
Query: 358 PDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKL 414
D+ T +LL +C +G+ + K + G D V YN L+S C ++A
Sbjct: 516 VDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMF 575
Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
+ M+ +G PDNY++ L+ GL K++EAI + N + + ++ ++D +
Sbjct: 576 LDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCK 635
Query: 475 AGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYT 534
A R + + F + + + V Y IR GR A L MKH + PN+ T
Sbjct: 636 AERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSAT 695
Query: 535 YRVMLLSFCKERNIKMVKRLLQDV 558
Y ++ ++ K L +++
Sbjct: 696 YTSLIKGMSIISRVEEAKLLFEEM 719
Score = 149 bits (377), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 106/421 (25%), Positives = 189/421 (44%), Gaps = 39/421 (9%)
Query: 182 LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
P+ + NI L +L + N+ + + V KG P+V +F +N FCK G++ EA +
Sbjct: 236 FPSKTTCNILLTSLVRANEFQKCCEAFDV-VCKGVSPDVYLFTTAINAFCKGGKVEEAVK 294
Query: 242 LLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFM 301
L M G + +V + +IDG R D A EKMV+ G P ++TY+ L+KG
Sbjct: 295 LFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLT 354
Query: 302 EAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSY 361
AK A+ L + +G P+++ +N LID + GS + A+++ D ++ L S
Sbjct: 355 RAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSS 414
Query: 362 TFCSLLSTVCLSGR----------------------FSLLPKLVC-------GLEVEADL 392
T+ +L+ C +G+ F+ + L+C L ++
Sbjct: 415 TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEM 474
Query: 393 VVYN---------ALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKI 443
++ N L+S CK G ++A++L+ L+KGF D + LL GLC A K+
Sbjct: 475 LLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKL 534
Query: 444 DEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVA 503
DEA + + I+ ++ + ++ + +A + D +Y++
Sbjct: 535 DEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSIL 594
Query: 504 IRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
I GL + EEA + K + P+ YTY VM+ CK + + +++ +
Sbjct: 595 ICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNV 654
Query: 564 E 564
+
Sbjct: 655 Q 655
Score = 139 bits (351), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 193/418 (46%), Gaps = 7/418 (1%)
Query: 138 VLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFL----SFNIALC 193
+E D M G + + N ++ K G+ D ++LKE F SF +C
Sbjct: 397 AIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVIC 456
Query: 194 NLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSL 253
LC + +G M+ + P + L++ CK G+ ++A +L + G +
Sbjct: 457 LLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVV 516
Query: 254 SVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
L+ G +LD A + ++++ GC + V+Y +LI G K AF FL
Sbjct: 517 DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 576
Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
D + G PD +++LI L M ++A+ +D ++PD YT+ ++ C +
Sbjct: 577 DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA 636
Query: 374 GRFSLLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
R + + V+ + VVYN L+ +C++G + A++L M KG +P++ ++
Sbjct: 637 ERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATY 696
Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
L++G+ +++EA +++ + M N +TA++D + G+ K L R
Sbjct: 697 TSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHS 756
Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNI 548
+ + ++YTV I G G EA L ++M+ + P++ TY+ + + K+ +
Sbjct: 757 KNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGV 814
Score = 37.7 bits (86), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 72/163 (44%), Gaps = 11/163 (6%)
Query: 86 FDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLR---IYWRGEMYGMVLEAF 142
++H+I R +GR + ++ G + T+ ++ I R E ++ F
Sbjct: 661 YNHLIRAYCR-SGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLL---F 716
Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKL 198
+EM G PN F ++D K+G++ +L+E PN +++ + + +
Sbjct: 717 EEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARD 776
Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQ 241
+V+ ++ M KG P+ ++ + + K G + EA++
Sbjct: 777 GNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 819
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 198/404 (49%), Gaps = 13/404 (3%)
Query: 180 TQLPNFLSFNI---ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
T PN +S++I LC + +L + +KD +G KG P+ R + +L+ C G I
Sbjct: 261 TCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMG---EKGCQPSTRTYTVLIKALCDRGLI 317
Query: 237 AEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSL 296
+A+ L MI G +V+ +TVLIDG R +++ A + KMV++ P+V+TY +L
Sbjct: 318 DKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNAL 377
Query: 297 IKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
I G+ + AF L ++E P++ N L++ L ++G A+ + +L+ L
Sbjct: 378 INGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGL 437
Query: 357 VPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVK 413
PD ++ L+ +C G + KL+ + ++E D + + A+++ FCK G + A
Sbjct: 438 SPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASA 497
Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
ML KG + D + L+ G+C K +A+ + + +V H I+D L
Sbjct: 498 FLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLS 557
Query: 474 EAGRCHKAIQLFRRAIVEKYPL--DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
+ + + + + + + K L VV+YT + GL+ G ++ + MK PN
Sbjct: 558 KGCKVKEELAMLGK--INKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPN 615
Query: 532 AYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTK 575
Y Y +++ C+ ++ ++LL + D+ + ++ T + K
Sbjct: 616 VYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVK 659
Score = 135 bits (341), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 98/419 (23%), Positives = 201/419 (47%), Gaps = 9/419 (2%)
Query: 98 GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
GR E G+ ++ GC +T+ + ++ + FDEM G PN
Sbjct: 280 GRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTY 339
Query: 158 NIVMDVLFKIGRVDL--GI--KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
+++D L + G+++ G+ K++K+ P+ +++N + CK V +++ +M +
Sbjct: 340 TVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEK 399
Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
+ PNVR F L+ C++G+ +A LL M+ G S + ++ VLIDG R ++
Sbjct: 400 RACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNT 459
Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
A L M P+ +T+T++I F + +A +FL ++ +G + D V LID
Sbjct: 460 AYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLID 519
Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTF---CSLLSTVC-LSGRFSLLPKLVCGLEVE 389
+ K+G DAL + + L++++++ ++ +LS C + ++L K + L +
Sbjct: 520 GVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGK-INKLGLV 578
Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
+V Y L+ ++G + ++ M G P+ Y + ++ GLC +++EA +
Sbjct: 579 PSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKL 638
Query: 450 YQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
+ + + N +T +V + G+ +A++ R + Y L+ Y+ ++G +
Sbjct: 639 LSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFV 697
Score = 119 bits (297), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 122/529 (23%), Positives = 207/529 (39%), Gaps = 88/529 (16%)
Query: 65 IALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLL 124
I + FF+W K Y D + ++ ++ +G + ++ L + + + L
Sbjct: 85 ICVRFFMWVCKHSSYCFDPTQKNQLLKLIVS-SGLYRVAHAVIVALIKECSRCEKEMLKL 143
Query: 125 FLRIYWRGEMYGMVLEAFDEMGR-FGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLP 183
MY FDE+ FGF N + +L + ++DLG
Sbjct: 144 ---------MY-----CFDELREVFGFRLNYPCYS---SLLMSLAKLDLG---------- 176
Query: 184 NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
FL++ V+ + M GF + + ++N CK G A +
Sbjct: 177 -FLAY------------VTYRR-----MEADGFVVGMIDYRTIVNALCKNGYTEAAEMFM 218
Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQN-GCSPNVVTYTSLIKGFME 302
++ +G L + T L+ GF R L A +++ M + C+PN V+Y+ LI G E
Sbjct: 219 SKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCE 278
Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
AF D + +G P + VLI L G D A +++D ++ P+ +T
Sbjct: 279 VGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHT 338
Query: 363 FCSLLSTVCLSGRFSLLPKLVCGLEVE----ADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
+ L+ +C G+ VC V+ ++ YNAL++ +CK G A +L M
Sbjct: 339 YTVLIDGLCRDGKIEE-ANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVM 397
Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
+ P+ +F L+ GLC G+
Sbjct: 398 EKRACKPNVRTFNELMEGLC-----------------------------------RVGKP 422
Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
+KA+ L +R + D+VSY V I GL G AY L S M + P+ T+ +
Sbjct: 423 YKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAI 482
Query: 539 LLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAV 587
+ +FCK+ + L ++ I LD T L + K + A+
Sbjct: 483 INAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDAL 531
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 156/374 (41%), Gaps = 51/374 (13%)
Query: 289 NVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVY 348
N Y+SL+ + + +A+ +E++G ++ + +++ L K G + A
Sbjct: 159 NYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFM 218
Query: 349 DGLLELKLVPDSYTFCSLLSTVC--LSGRFSLLPKLVCGLEVEA--DLVVYNALLSYFCK 404
+L++ V DS+ SLL C L+ R +L V EV + V Y+ L+ C+
Sbjct: 219 SKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCE 278
Query: 405 AGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHV 464
G +A L + M +KG P ++ L++ LC ID+A N++ ++ N H
Sbjct: 279 VGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHT 338
Query: 465 HTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMK 524
+T ++D L G+ +A + R+ + ++ V++Y I G + GR A+ L + M+
Sbjct: 339 YTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVME 398
Query: 525 HIAVPPNAYT-----------------------------------YRVMLLSFCKERNIK 549
A PN T Y V++ C+E ++
Sbjct: 399 KRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMN 458
Query: 550 MVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEMWRKLGL 609
+LL + IE D T T I F A V LGL M RK G+
Sbjct: 459 TAYKLLSSMNCFDIEPDCLT---FTAIINAFCKQGKAD---VASAFLGL----MLRK-GI 507
Query: 610 LSDETMTPVSLFDG 623
DE +T +L DG
Sbjct: 508 SLDE-VTGTTLIDG 520
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/443 (20%), Positives = 161/443 (36%), Gaps = 97/443 (21%)
Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKLNDVSNV 204
G +P+ + N+++D L + G ++ K+L P+ L+F + CK
Sbjct: 436 GLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVA 495
Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGR----------------------------- 235
+G+M+RKG + L++ CK+G+
Sbjct: 496 SAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDM 555
Query: 236 ------IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
+ E +LG + LG SV +T L+DG R + + + E M +GC PN
Sbjct: 556 LSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPN 615
Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
V YT +I G + A L ++ G +P+ V + V++ G D AL+
Sbjct: 616 VYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVR 675
Query: 350 GLLELKLVPDSYTFCSLL---------------STV------------------------ 370
++E + + SLL STV
Sbjct: 676 AMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLG 735
Query: 371 -CLSGRFSLLPKLVC--GLEVEADLVVYNAL-------------LSYFCKAGFPNQAVKL 414
C+SG L +C G E++ +V N L + +C + ++L
Sbjct: 736 GCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKAMDIIMESYCSKKKHTKCMEL 795
Query: 415 YNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIE 474
+L GF P SF +++GL + A + ++ +N V V+ L+E
Sbjct: 796 ITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSGVLTYVECLME 855
Query: 475 A---GRCHKAIQLFRRAIVEKYP 494
G C + I L + + P
Sbjct: 856 GDETGDCSEVIDLVDQLHCRERP 878
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 155 bits (393), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 128/534 (23%), Positives = 236/534 (44%), Gaps = 9/534 (1%)
Query: 75 KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEM 134
+ R DV SF + + T R ++ ++ GC + + + ++
Sbjct: 138 RDRGITPDVYSFTIRMKSFCK-TSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENF 196
Query: 135 YGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVD----LGIKVLKETQLPNFLSFNI 190
E F +M G + N ++ VL K G V L KV+K LPN ++N+
Sbjct: 197 KAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNL 256
Query: 191 ALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLG 250
+ LC+ ++ ++G ++ +G P+V + L+ CK + EA LG M+ G
Sbjct: 257 FIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEG 316
Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
+ LI G+ + + +A + V NG P+ TY SLI G + A
Sbjct: 317 LEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRAL 376
Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
+ + +G P+++ +N LI LS G +A + + + E L+P+ TF L++ +
Sbjct: 377 ALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGL 436
Query: 371 CLSGRFS---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDN 427
C G S L K++ D+ +N L+ + A+++ + MLD G PD
Sbjct: 437 CKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDV 496
Query: 428 YSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRR 487
Y++ LL GLC K ++ + Y+ +V A N +++ L + +A+ L
Sbjct: 497 YTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEE 556
Query: 488 AIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI-AVPPNAYTYRVMLLSFCKER 546
+ D V++ I G + G + AY L+ +M+ V + TY +++ +F ++
Sbjct: 557 MKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKL 616
Query: 547 NIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
N+ M ++L Q+++D + D +T + K + + L+EM G IP
Sbjct: 617 NVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIP 670
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 137/569 (24%), Positives = 245/569 (43%), Gaps = 18/569 (3%)
Query: 45 PIILAPHIVHSTLLNCPSD-LIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLT--GRFE 101
P +L H+ + ++ C D + AL F K+ + H + ++ SV+ +L G+FE
Sbjct: 3 PPLLPKHV--TAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYR---SVIEKLGYYGKFE 57
Query: 102 TVRGIVGEL-ARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIV 160
+ ++ ++ VG + ++ ++ Y R + F+ M + P F+ N +
Sbjct: 58 AMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAI 117
Query: 161 MDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGF 216
M VL G D KV + P+ SF I + + CK + ++ M +G
Sbjct: 118 MSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGC 177
Query: 217 YPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGY 276
NV + ++ F + AE Y+L G M+ G SL ++ + L+ + +
Sbjct: 178 EMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEK 237
Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
L +K+++ G PN+ TY I+G + A + L +G PD++ +N LI L
Sbjct: 238 LLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLC 297
Query: 337 KMGSYDDALDVYDG-LLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DL 392
K + +A +VY G ++ L PDSYT+ +L++ C G L ++V D
Sbjct: 298 KNSKFQEA-EVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQ 356
Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
Y +L+ C G N+A+ L+N L KG P+ + L++GL I EA +
Sbjct: 357 FTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANE 416
Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
+ +V+ L + G A L + I + Y D+ ++ + I G +
Sbjct: 417 MSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLK 476
Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
E A + M V P+ YTY +L CK + V + +++ + T
Sbjct: 477 MENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNI 536
Query: 573 LTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
L + + ++ A+ L EM N + PD
Sbjct: 537 LLESLCRYRKLDEALGLLEEMKNKSVNPD 565
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 175/382 (45%), Gaps = 9/382 (2%)
Query: 71 IWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYW 130
+ C ++ DV +++++I + + +F+ +G++ G + T+ + Y
Sbjct: 274 VGCLIEQGPKPDVITYNNLIYGLCK-NSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYC 332
Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFL 186
+G M + + GF P+ F ++D L G + + + E PN +
Sbjct: 333 KGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVI 392
Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
+N + L + + M KG P V+ F IL+N CKMG +++A L+ +M
Sbjct: 393 LYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVM 452
Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
I+ G + + +LI G+ +++ A + + M+ NG P+V TY SL+ G + F
Sbjct: 453 ISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKF 512
Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
+ +G AP+L N+L++ L + D+AL + + + + PD+ TF +L
Sbjct: 513 EDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTL 572
Query: 367 LSTVC----LSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
+ C L G ++L K+ +V + YN ++ F + A KL+ M+D+
Sbjct: 573 IDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRC 632
Query: 423 FTPDNYSFVGLLRGLCGARKID 444
PD Y++ ++ G C ++
Sbjct: 633 LGPDGYTYRLMVDGFCKTGNVN 654
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 137/314 (43%), Gaps = 13/314 (4%)
Query: 76 QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
++ +VQ+F+ +++ + ++ G G+V + G TF + + Y
Sbjct: 419 EKGLIPEVQTFNILVNGLCKM-GCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKM 477
Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIA 191
LE D M G P+ + N +++ L K + + ++ K + PN +FNI
Sbjct: 478 ENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNIL 537
Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI-TLG 250
L +LC+ + ++ M K P+ F L++ FCK G + AY L M
Sbjct: 538 LESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYK 597
Query: 251 TSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAF 310
S S + ++I F + MA L+++MV P+ TY ++ GF + ++ +
Sbjct: 598 VSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGY 657
Query: 311 SFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTV 370
FL + G P L +I+CL +A + +++ LVP++ ++T+
Sbjct: 658 KFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA------VNTI 711
Query: 371 C-LSGRFSLLPKLV 383
C + + PKLV
Sbjct: 712 CDVDKKEVAAPKLV 725
Score = 76.6 bits (187), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 109/249 (43%), Gaps = 9/249 (3%)
Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
+ E + YNA++S +G+ +QA K+Y M D+G TPD YSF ++ C + A
Sbjct: 106 DCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAA 165
Query: 447 INVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRG 506
+ + + +N + +V E + +LF + + L + ++ +R
Sbjct: 166 LRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRV 225
Query: 507 LLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
L + G +E L ++ V PN +TY + + C+ + R++ +I+ + D
Sbjct: 226 LCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPD 285
Query: 567 YHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM--------WRKLGLLS-DETMTP 617
T L + K A L +M N GL PD + K G++ E +
Sbjct: 286 VITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVG 345
Query: 618 VSLFDGFVP 626
++F+GFVP
Sbjct: 346 DAVFNGFVP 354
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 137/548 (25%), Positives = 245/548 (44%), Gaps = 50/548 (9%)
Query: 116 VIKAQTFLLF------LRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
+++ TF+ F L Y + G M + GF N + NI++ L +
Sbjct: 98 MLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLE 157
Query: 170 VDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEI 225
+ +L+E + +P+ S+N + C+ ++ ++ M G ++ + I
Sbjct: 158 CGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGI 217
Query: 226 LLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
L++ FCK G++ EA L M +G + +T LI GF LD L++++++ G
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277
Query: 286 CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL 345
SP +TY +LI+GF + A + + G P++ + LID L +G +AL
Sbjct: 278 DSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEAL 337
Query: 346 DVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS---LLPKLVCGLEVEADLVVYNALLSYF 402
+ + ++E P++ T+ +++ +C G + + +L+ D + YN LL
Sbjct: 338 QLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGL 397
Query: 403 CKAGFPNQAVKLYNTML-DKGFT-PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
C G ++A KL ML D +T PD S+ L+ GLC ++ +A+++Y +V A
Sbjct: 398 CAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAG 457
Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
+ +++ ++AG +KA++L+++ K + +YT I G + G A L
Sbjct: 458 DRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLL 517
Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ---------DVIDARIELDYHTSI 571
+M+ + P+ + Y +L S CKE ++ RL + DV+ I +D
Sbjct: 518 CKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGS--- 574
Query: 572 RLTKFIFKFHSSSSAVNQLVEMCNLGLIPD--------EMWRKLGLLSDETMTPVSLFD- 622
K SA + LV M GL PD + KLG L + +S FD
Sbjct: 575 ------LKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDE----AISFFDK 624
Query: 623 ----GFVP 626
GF P
Sbjct: 625 MVDSGFEP 632
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/506 (22%), Positives = 223/506 (44%), Gaps = 9/506 (1%)
Query: 105 GIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVL 164
G++ + + G + L+ R G + EM R P+ F+ N V+
Sbjct: 128 GVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGF 187
Query: 165 FKIGRVDLGIKVLKETQLP----NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV 220
+ ++ +++ E + + +++ I + CK + + M G ++
Sbjct: 188 CEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADL 247
Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
++ L+ FC G + L ++ G S + LI GF +L +L A ++E
Sbjct: 248 VVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEF 307
Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGS 340
M++ G PNV TYT LI G A L+++ + P+ V +N++I+ L K G
Sbjct: 308 MIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGL 367
Query: 341 YDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL-----EVEADLVVY 395
DA+++ + + + + PD+ T+ LL +C G KL+ + + D++ Y
Sbjct: 368 VADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISY 427
Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
NAL+ CK +QA+ +Y+ +++K D + LL A +++A+ +++ I
Sbjct: 428 NALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISD 487
Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEE 515
+ N+ +TA++D + G + A L + V + V Y + L + G ++
Sbjct: 488 SKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQ 547
Query: 516 AYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTK 575
A+ L+ +M+ P+ ++ +M+ K +IK + LL + A + D T +L
Sbjct: 548 AWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLIN 607
Query: 576 FIFKFHSSSSAVNQLVEMCNLGLIPD 601
K A++ +M + G PD
Sbjct: 608 RFLKLGYLDEAISFFDKMVDSGFEPD 633
Score = 125 bits (315), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 113/483 (23%), Positives = 218/483 (45%), Gaps = 17/483 (3%)
Query: 97 TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWR-GEM-YGMVLEAFDEMGRFGFTPNT 154
G+ + G + E+ +G + +R + GE+ G L FDE+ G +P
Sbjct: 225 AGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKAL--FDEVLERGDSPCA 282
Query: 155 FARNIVMDVLFKIGRVDLGIKV----LKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGM 210
N ++ K+G++ ++ ++ PN ++ + LC + ++ +
Sbjct: 283 ITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNL 342
Query: 211 MVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRR 270
M+ K PN + I++N CK G +A+A +++ LM T + +L+ G
Sbjct: 343 MIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGD 402
Query: 271 LDMAGYLWEKMVQNGC--SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFH 328
LD A L M+++ P+V++Y +LI G + A D+L + A D V
Sbjct: 403 LDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTT 462
Query: 329 NVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL-- 386
N+L++ K G + A++++ + + K+V +S T+ +++ C +G ++ L+C +
Sbjct: 463 NILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRV 522
Query: 387 -EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDE 445
E++ + YN LLS CK G +QA +L+ M PD SF ++ G A I
Sbjct: 523 SELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKS 582
Query: 446 AINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIR 505
A ++ G+ + + ++ +++R ++ G +AI F + + + D ++
Sbjct: 583 AESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLK 642
Query: 506 GLLEGGRTEEAYILYSQM--KHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARI 563
+ G T++ L ++ K I V T VM N+ + KRLL+ V D +
Sbjct: 643 YCISQGETDKLTELVKKLVDKDI-VLDKELTCTVMDYMCNSSANMDLAKRLLR-VTDDKE 700
Query: 564 ELD 566
E D
Sbjct: 701 ERD 703
Score = 99.4 bits (246), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 172/395 (43%), Gaps = 53/395 (13%)
Query: 211 MVRKGFYPNVRMFEILLNCFCKMG------------RIAEAYQLLGLMITLGTSLSVNAW 258
+VRK P R++ L+N F + ++ A + + G+SL+ A
Sbjct: 19 VVRKLLNP--RVYSKLVNAFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSGSSLAF-AG 75
Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
L+ R R ++A + KM++ N V+ + L++ +++ + AF L ++
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135
Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF--------------- 363
G A ++ HN+L+ L + A+ + + L+PD +++
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 364 ------------CS--------LLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLS 400
CS L+ C +G+ + ++ +EADLVVY +L+
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255
Query: 401 YFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAV 460
FC G ++ L++ +L++G +P ++ L+RG C ++ EA +++ ++
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP 315
Query: 461 NAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILY 520
N + +T ++D L G+ +A+QL I + + V+Y + I L + G +A +
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIV 375
Query: 521 SQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLL 555
MK P+ TY ++L C + ++ +LL
Sbjct: 376 ELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLL 410
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 176/360 (48%), Gaps = 7/360 (1%)
Query: 97 TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
+G+ + ++ + + C T+ + + R G ++ DEM G TP+
Sbjct: 217 SGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVT 276
Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
N++++ + K GR+D IK L + PN ++ NI L ++C + + ++ M+
Sbjct: 277 YNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADML 336
Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
RKGF P+V F IL+N C+ G + A +L M G + ++ L+ GF + +++D
Sbjct: 337 RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMD 396
Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
A E+MV GC P++VTY +++ + A L+ L S+G +P L+ +N +I
Sbjct: 397 RAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVI 456
Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VE 389
D L+K G A+ + D + L PD+ T+ SL+ + G+ K E +
Sbjct: 457 DGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIR 516
Query: 390 ADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINV 449
+ V +N+++ CK+ ++A+ M+++G P+ S+ L+ GL EA+ +
Sbjct: 517 PNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALEL 576
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 116/521 (22%), Positives = 226/521 (43%), Gaps = 35/521 (6%)
Query: 80 FHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVL 139
DV+S +H+ +V TG E + + G V +R + R
Sbjct: 100 LEDVESNNHLRQMVR--TGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAA 157
Query: 140 EAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-PNFLSFNIALCNLCKL 198
+ + + G P+ N+++ K G ++ + VL + P+ +++N L +LC
Sbjct: 158 KILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDS 217
Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
+ +V+ M+++ YP+V + IL+ C+ + A +LL M G + V +
Sbjct: 218 GKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTY 277
Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
VL++G + RLD A M +GC PNV+T+ +++ + A L +
Sbjct: 278 NVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLR 337
Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL 378
+G +P +V N+LI+ L + G A+D+ + + + P+S +
Sbjct: 338 KGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLS---------------- 381
Query: 379 LPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLC 438
YN LL FCK ++A++ M+ +G PD ++ +L LC
Sbjct: 382 ----------------YNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALC 425
Query: 439 GARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVV 498
K+++A+ + + + + ++D L +AG+ KAI+L + D +
Sbjct: 426 KDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTI 485
Query: 499 SYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
+Y+ + GL G+ +EA + + + + + PNA T+ ++L CK R L +
Sbjct: 486 TYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFM 545
Query: 559 IDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLI 599
I+ + + + L + + + A+ L E+CN GL+
Sbjct: 546 INRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586
Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 163/358 (45%), Gaps = 14/358 (3%)
Query: 254 SVNAWTVL--IDGFRRLRRLDMAGYL------WEKMVQNGCSPNVVTYTSLIKGFMEAKM 305
SVN+ L ++ LR++ G L E MV +G P+++ T+LI+GF
Sbjct: 93 SVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGK 152
Query: 306 FSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCS 365
A L++LE G PD++ +NV+I K G ++AL V D + + PD T+ +
Sbjct: 153 TRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLD---RMSVSPDVVTYNT 209
Query: 366 LLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
+L ++C SG+ +++ + + D++ Y L+ C+ A+KL + M D+G
Sbjct: 210 ILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRG 269
Query: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI 482
TPD ++ L+ G+C ++DEAI + + N H I+ + GR A
Sbjct: 270 CTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAE 329
Query: 483 QLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSF 542
+L + + + VV++ + I L G A + +M PN+ +Y +L F
Sbjct: 330 KLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGF 389
Query: 543 CKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
CKE+ + L+ ++ D T + + K AV L ++ + G P
Sbjct: 390 CKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSP 447
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 163/376 (43%), Gaps = 12/376 (3%)
Query: 232 KMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVV 291
+ G + E ++ L M+ G + T LI GF RL + A + E + +G P+V+
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173
Query: 292 TYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGL 351
TY +I G+ +A + A S LD + +PD+V +N ++ L G A++V D +
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRMSV---SPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 352 LELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFP 408
L+ PD T+ L+ C KL+ + D+V YN L++ CK G
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 409 NQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAI 468
++A+K N M G P+ + +LR +C + +A + ++ + + +
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350
Query: 469 VDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAV 528
++ L G +AI + + + +SY + G + + + A +M
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410
Query: 529 PPNAYTYRVMLLSFCKERNIKMVKRLLQDVID---ARIELDYHTSIRLTKFIFKFHSSSS 585
P+ TY ML + CK+ ++ +L + + + + Y+T I + K +
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVI---DGLAKAGKTGK 467
Query: 586 AVNQLVEMCNLGLIPD 601
A+ L EM L PD
Sbjct: 468 AIKLLDEMRAKDLKPD 483
Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 124/268 (46%), Gaps = 4/268 (1%)
Query: 97 TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
TGR+ ++ ++ R G TF + + R + G ++ ++M + G PN+ +
Sbjct: 322 TGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLS 381
Query: 157 RNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
N ++ K ++D I+ L+ P+ +++N L LCK V + +++ +
Sbjct: 382 YNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLS 441
Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLD 272
KG P + + +++ K G+ +A +LL M ++ L+ G R ++D
Sbjct: 442 SKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVD 501
Query: 273 MAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLI 332
A + + + G PN VT+ S++ G +++ A FL + + G P+ + +LI
Sbjct: 502 EAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILI 561
Query: 333 DCLSKMGSYDDALDVYDGLLELKLVPDS 360
+ L+ G +AL++ + L L+ S
Sbjct: 562 EGLAYEGMAKEALELLNELCNKGLMKKS 589
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 86/209 (41%), Gaps = 3/209 (1%)
Query: 393 VVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQG 452
V N L + G + K M+ G PD L+RG C K +A + +
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162
Query: 453 IVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
+ + + + ++ +AG + A+ + R V DVV+Y +R L + G+
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSP---DVVTYNTILRSLCDSGK 219
Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIR 572
++A + +M P+ TY +++ + C++ + +LL ++ D D T
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279
Query: 573 LTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
L I K A+ L +M + G P+
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPN 308
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/500 (23%), Positives = 222/500 (44%), Gaps = 17/500 (3%)
Query: 115 CVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI 174
C F L +R Y + EAF + GFT + A N ++ L +IG V+L
Sbjct: 161 CGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAW 220
Query: 175 KVLKETQLP----NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCF 230
V +E N + NI + LCK + V + + KG YP++ + L++ +
Sbjct: 221 GVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAY 280
Query: 231 CKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNV 290
G + EA++L+ M G S V + +I+G + + + A ++ +M+++G SP+
Sbjct: 281 SSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDS 340
Query: 291 VTYTSLI-KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
TY SL+ + + + F DM S PDLV + ++ ++ G+ D AL ++
Sbjct: 341 TTYRSLLMEACKKGDVVETEKVFSDM-RSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN 399
Query: 350 GLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAG 406
+ E L+PD+ + L+ C G S+ L + + D+V YN +L CK
Sbjct: 400 SVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 459
Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
+A KL+N M ++ PD+Y+ L+ G C + A+ ++Q + ++ +
Sbjct: 460 MLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYN 519
Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
++D + G A +++ + ++ +SY++ + L G EA+ ++ +M
Sbjct: 520 TLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISK 579
Query: 527 AVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKF-----H 581
+ P M+ +C+ N + L+ +I D I I+ F
Sbjct: 580 NIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPD---CISYNTLIYGFVREENM 636
Query: 582 SSSSAVNQLVEMCNLGLIPD 601
S + + + +E GL+PD
Sbjct: 637 SKAFGLVKKMEEEQGGLVPD 656
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/542 (22%), Positives = 228/542 (42%), Gaps = 16/542 (2%)
Query: 75 KQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRG-- 132
+ + + + + + +I + R+ G E G+ E++R G I T + + +
Sbjct: 192 RSKGFTVSIDACNALIGSLVRI-GWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGK 250
Query: 133 -EMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLS 187
E G L E G + P+ N ++ G ++ +++ P +
Sbjct: 251 MEKVGTFLSQVQEKGVY---PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYT 307
Query: 188 FNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMI 247
+N + LCK K+V M+R G P+ + LL CK G + E ++ M
Sbjct: 308 YNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMR 367
Query: 248 TLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFS 307
+ + ++ ++ F R LD A + + + G P+ V YT LI+G+ M S
Sbjct: 368 SRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMIS 427
Query: 308 IAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLL 367
+A + + + +G A D+V +N ++ L K +A +++ + E L PDSYT L+
Sbjct: 428 VAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILI 487
Query: 368 STVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
C G +L ++ + D+V YN LL F K G + A +++ M+ K
Sbjct: 488 DGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEIL 547
Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
P S+ L+ LC + EA V+ ++ N + +++ +G
Sbjct: 548 PTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESF 607
Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI--AVPPNAYTYRVMLLSF 542
+ I E + D +SY I G + +A+ L +M+ + P+ +TY +L F
Sbjct: 608 LEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGF 667
Query: 543 CKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDE 602
C++ +K + +L+ +I+ + D T + + + A EM G PD+
Sbjct: 668 CRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
Query: 603 MW 604
+
Sbjct: 728 KF 729
Score = 89.7 bits (221), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 154/351 (43%), Gaps = 7/351 (1%)
Query: 256 NAWTVLIDGFRR--LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFL 313
+A + L+ RR + RL++ L + C N + LI+ +++A+ A
Sbjct: 131 DAQSCLLRMIRRSGVSRLEIVNSLDSTF--SNCGSNDSVFDLLIRTYVQARKLREAHEAF 188
Query: 314 DMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLS 373
+L S+G + N LI L ++G + A VY + + + YT +++ +C
Sbjct: 189 TLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKD 248
Query: 374 GRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSF 430
G+ + + ++ V D+V YN L+S + G +A +L N M KGF+P Y++
Sbjct: 249 GKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTY 308
Query: 431 VGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIV 490
++ GLC K + A V+ ++ + + ++ + +++ + G + ++F
Sbjct: 309 NTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRS 368
Query: 491 EKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKM 550
D+V ++ + G ++A + ++ +K + P+ Y +++ +C++ I +
Sbjct: 369 RDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISV 428
Query: 551 VKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
L +++ +D T + + K A EM L PD
Sbjct: 429 AMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPD 479
>sp|Q9FH87|PP447_ARATH Putative pentatricopeptide repeat-containing protein At5g65820
OS=Arabidopsis thaliana GN=At5g65820 PE=3 SV=1
Length = 637
Score = 152 bits (383), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 119/526 (22%), Positives = 243/526 (46%), Gaps = 51/526 (9%)
Query: 46 IILAPHIVHSTLLNC-PSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVR 104
+ L P ++ L C + + FF+W AKQ Y H ++ + M+ +++++ +F V
Sbjct: 109 VELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMR-QFGAVW 167
Query: 105 GIVGELARVG-CVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDV 163
G++ E+ + +I+ + F++ ++ + +M +E DEM +FGF P+ + ++D
Sbjct: 168 GLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDA 227
Query: 164 LFKIGRVDLGIKVLKETQLP---NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNV 220
L K G V K+ ++ ++ N F L C++ + K V+ M GF P++
Sbjct: 228 LCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDI 287
Query: 221 RMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEK 280
+ LL+ + G++A+AY LL M G + N +TVLI ++ R++ A ++ +
Sbjct: 288 VDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVE 347
Query: 281 MVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAP-DLVFHNVLIDCLSKMG 339
M + C +VVTYT+L+ GF + + LD + +G P +L + ++++ K
Sbjct: 348 MERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMV-AHEKKE 406
Query: 340 SYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALL 399
S+++ L++ + + +++ P D+ +YN ++
Sbjct: 407 SFEECLELMEKMRQIEYHP--------------------------------DIGIYNVVI 434
Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNN-- 457
CK G +AV+L+N M + G +P +FV ++ GL + EA + ++ +V
Sbjct: 435 RLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLF 494
Query: 458 -----PAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGR 512
+ ++T + D+ +E + + + A L+V+S+T+ I L G
Sbjct: 495 SVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGAC----ELNVLSWTIWIHALFSKGY 550
Query: 513 TEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
+EA +M + P T+ ++ K N + + + V
Sbjct: 551 EKEACSYCIEMIEMDFMPQPDTFAKLMKGLKKLYNREFAGEITEKV 596
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 3/216 (1%)
Query: 388 VEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAI 447
+E +L V L+ F A +A+++ + M GF PD Y F LL LC + +A
Sbjct: 181 IEPELFV--VLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAA 238
Query: 448 NVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGL 507
+++ + M P VN T+++ G+ +A + + + D+V YT + G
Sbjct: 239 KLFEDMRMRFP-VNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGY 297
Query: 508 LEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDY 567
G+ +AY L M+ PNA Y V++ + CK ++ ++ ++ E D
Sbjct: 298 ANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADV 357
Query: 568 HTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPDEM 603
T L K+ L +M GL+P E+
Sbjct: 358 VTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSEL 393
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 184/367 (50%), Gaps = 6/367 (1%)
Query: 184 NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL 243
+ S+NI + LC+ + V+G M++ G+ P+V L+N FC+ R+ +A L+
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 162
Query: 244 GLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEA 303
M +G V + +IDG ++ ++ A L+++M ++G + VTY SL+ G +
Sbjct: 163 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 222
Query: 304 KMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
+S A + + P+++ +ID K G + +A+ +Y+ + + PD +T+
Sbjct: 223 GRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTY 282
Query: 364 CSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
SL++ +C+ GR +++ + + D+V YN L++ FCK+ ++ KL+ M
Sbjct: 283 NSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQ 342
Query: 421 KGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHK 480
+G D ++ +++G A + D A ++ + + N ++ ++ L R K
Sbjct: 343 RGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEK 399
Query: 481 AIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLL 540
A+ LF + LD+ +Y + I G+ + G E+A+ L+ + + P+ +Y M+
Sbjct: 400 ALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMIS 459
Query: 541 SFCKERN 547
FC++R
Sbjct: 460 GFCRKRQ 466
Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 189/383 (49%), Gaps = 6/383 (1%)
Query: 170 VDLGIKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNC 229
+DL K+++ LP+ + F+ L + K + V + M G ++ + I++NC
Sbjct: 54 IDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINC 113
Query: 230 FCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPN 289
C+ R A ++G M+ G V + LI+GF + R+ A L KM + G P+
Sbjct: 114 LCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPD 173
Query: 290 VVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYD 349
VV Y ++I G + + + A D +E +G D V +N L+ L G + DA +
Sbjct: 174 VVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMR 233
Query: 350 GLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAG 406
++ +VP+ TF +++ G+FS KL + V+ D+ YN+L++ C G
Sbjct: 234 DMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHG 293
Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
++A ++ + M+ KG PD ++ L+ G C ++++DE +++ + + +
Sbjct: 294 RVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYN 353
Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
I+ +AGR A ++F R ++ P ++ +Y++ + GL R E+A +L+ M+
Sbjct: 354 TIIQGYFQAGRPDAAQEIFSR--MDSRP-NIRTYSILLYGLCMNWRVEKALVLFENMQKS 410
Query: 527 AVPPNAYTYRVMLLSFCKERNIK 549
+ + TY +++ CK N++
Sbjct: 411 EIELDITTYNIVIHGMCKIGNVE 433
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 193/407 (47%), Gaps = 10/407 (2%)
Query: 131 RGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFL 186
+ + Y +V+ F M G + ++ NIV++ L + R + + K++K P+ +
Sbjct: 81 KSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVV 140
Query: 187 SFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLM 246
+ + + C+ N V + D++ M GF P+V ++ +++ CK+G + +A +L M
Sbjct: 141 TVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRM 200
Query: 247 ITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMF 306
G + L+ G R A L MV PNV+T+T++I F++ F
Sbjct: 201 ERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKF 260
Query: 307 SIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL 366
S A + + PD+ +N LI+ L G D+A + D ++ +PD T+ +L
Sbjct: 261 SEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTL 320
Query: 367 LSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGF 423
++ C S R KL + D + YN ++ + +AG P+ A ++++ M +
Sbjct: 321 INGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR-- 378
Query: 424 TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQ 483
P+ ++ LL GLC ++++A+ +++ + + ++ + ++ + + G A
Sbjct: 379 -PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWD 437
Query: 484 LFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPP 530
LFR + DVVSYT I G + +++ +LY +M+ + P
Sbjct: 438 LFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 175/378 (46%), Gaps = 11/378 (2%)
Query: 81 HDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLE 140
HD+ S++ +I+ + R + RF +VG++ + G T + + +G ++
Sbjct: 102 HDLYSYNIVINCLCRCS-RFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAID 160
Query: 141 AFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLC 196
+M GF P+ N ++D KIG V+ +++ + + +++N + LC
Sbjct: 161 LVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLC 220
Query: 197 KLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVN 256
S+ ++ MV + PNV F +++ F K G+ +EA +L M V
Sbjct: 221 CSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVF 280
Query: 257 AWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDML 316
+ LI+G R+D A + + MV GC P+VVTY +LI GF ++K +
Sbjct: 281 TYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 340
Query: 317 ESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF 376
G D + +N +I + G D A +++ + P+ T+ LL +C++ R
Sbjct: 341 AQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFS---RMDSRPNIRTYSILLYGLCMNWRV 397
Query: 377 S---LLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
+L + + E+E D+ YN ++ CK G A L+ ++ KG PD S+ +
Sbjct: 398 EKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTM 457
Query: 434 LRGLCGARKIDEAINVYQ 451
+ G C R+ D++ +Y+
Sbjct: 458 ISGFCRKRQWDKSDLLYR 475
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 139/285 (48%), Gaps = 3/285 (1%)
Query: 277 LWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLS 336
L+ KM+Q+ P++V ++ ++ ++K + + S +E G DL +N++I+CL
Sbjct: 56 LFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLC 115
Query: 337 KMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLV 393
+ + AL V +++ PD T SL++ C R LV +E D+V
Sbjct: 116 RCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVV 175
Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
+YN ++ CK G N AV+L++ M G D ++ L+ GLC + + +A + + +
Sbjct: 176 IYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM 235
Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
VM + N TA++D ++ G+ +A++L+ DV +Y I GL GR
Sbjct: 236 VMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRV 295
Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDV 558
+EA + M P+ TY ++ FCK + + +L +++
Sbjct: 296 DEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 340
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/445 (21%), Positives = 192/445 (43%), Gaps = 63/445 (14%)
Query: 236 IAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTS 295
+ E L MI S+ ++ ++ + + D+ L+ M G ++ +Y
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHA--------------------------------- 322
+I F IA S + + G+
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 323 --PDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLP 380
PD+V +N +ID K+G +DA++++D + + D+ T+ SL++ +C SGR+S
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 381 KLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGL 437
+L+ + ++ +++ + A++ F K G ++A+KLY M + PD +++ L+ GL
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289
Query: 438 CGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDV 497
C ++DEA + +V + + +++ ++ R + +LFR D
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT 349
Query: 498 VSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQD 557
++Y I+G + GR + A ++S+M PN TY ++L C ++ L ++
Sbjct: 350 ITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFEN 406
Query: 558 VIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD--EMWRKLGL--LSDE 613
+ + IELD +T + H MC +G + D +++R L L +
Sbjct: 407 MQKSEIELD------ITTYNIVIHG----------MCKIGNVEDAWDLFRSLSCKGLKPD 450
Query: 614 TMTPVSLFDGFVPCERRAGNANHLL 638
++ ++ GF C +R + + LL
Sbjct: 451 VVSYTTMISGF--CRKRQWDKSDLL 473
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/501 (23%), Positives = 219/501 (43%), Gaps = 7/501 (1%)
Query: 110 LARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGR 169
+ +V + + +T L + +G+ +E F++M G P+ + V+ L ++
Sbjct: 183 ITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKD 242
Query: 170 VDLGIKVLKETQLP----NFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEI 225
+ +++ + N + +N+ + LCK V + + K P+V +
Sbjct: 243 LSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCT 302
Query: 226 LLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNG 285
L+ CK+ +++ M+ L S S A + L++G R+ +++ A L +++V G
Sbjct: 303 LVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFG 362
Query: 286 CSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDAL 345
SPN+ Y +LI + + F A D + G P+ V +++LID + G D AL
Sbjct: 363 VSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTAL 422
Query: 346 DVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYF 402
+++ L Y + SL++ C G S + + ++E +V Y +L+ +
Sbjct: 423 SFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGY 482
Query: 403 CKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNA 462
C G N+A++LY+ M KG P Y+F LL GL A I +A+ ++ + N N
Sbjct: 483 CSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNR 542
Query: 463 HVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQ 522
+ +++ E G KA + + + D SY I GL G+ EA +
Sbjct: 543 VTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDG 602
Query: 523 MKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHS 582
+ N Y +L FC+E ++ + Q+++ ++LD L K
Sbjct: 603 LHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKD 662
Query: 583 SSSAVNQLVEMCNLGLIPDEM 603
L EM + GL PD++
Sbjct: 663 RKLFFGLLKEMHDRGLKPDDV 683
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 128/506 (25%), Positives = 215/506 (42%), Gaps = 50/506 (9%)
Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKE---TQLP-NFLSFNIALCNLCK 197
FD MG+ G PN +I++D+ + G++D + L E T L + +N + CK
Sbjct: 390 FDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCK 449
Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
D+S + + M+ K P V + L+ +C G+I +A +L M G + S+
Sbjct: 450 FGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYT 509
Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
+T L+ G R + A L+ +M + PN VTY +I+G+ E S AF FL +
Sbjct: 510 FTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMT 569
Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
+G PD + LI L G +A DGL + + + LL C G+
Sbjct: 570 EKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLE 629
Query: 378 -------------LLPKLVC------------------GLEVE-------ADLVVYNALL 399
+ LVC GL E D V+Y +++
Sbjct: 630 EALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMI 689
Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
K G +A +++ M+++G P+ ++ ++ GLC A ++EA + + +
Sbjct: 690 DAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSV 749
Query: 460 VNAHVHTAIVDRLIEAG-RCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYI 518
N + +D L + KA++L AI++ + +Y + IRG GR EEA
Sbjct: 750 PNQVTYGCFLDILTKGEVDMQKAVEL-HNAILKGLLANTATYNMLIRGFCRQGRIEEASE 808
Query: 519 LYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD---YHTSIRLTK 575
L ++M V P+ TY M+ C+ ++K L + + I D Y+T I
Sbjct: 809 LITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCC 868
Query: 576 FIFKFHSSSSAVNQLVEMCNLGLIPD 601
+ ++ N EM GLIP+
Sbjct: 869 VAGEMGKATELRN---EMLRQGLIPN 891
Score = 139 bits (350), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 106/449 (23%), Positives = 198/449 (44%), Gaps = 11/449 (2%)
Query: 98 GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
G G + E+ T+ + Y L + EM G P+ +
Sbjct: 451 GDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTF 510
Query: 158 NIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
++ LF+ G + +K+ E PN +++N+ + C+ D+S + + M
Sbjct: 511 TTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTE 570
Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
KG P+ + L++ C G+ +EA + + L+ +T L+ GF R +L+
Sbjct: 571 KGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEE 630
Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
A + ++MVQ G ++V Y LI G ++ K + F L + G PD V + +ID
Sbjct: 631 ALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMID 690
Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCG----LEVE 389
SK G + +A ++D ++ VP+ T+ ++++ +C +G F +++C +
Sbjct: 691 AKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAG-FVNEAEVLCSKMQPVSSV 749
Query: 390 ADLVVYNALLSYFCKAGFPNQ-AVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
+ V Y L K Q AV+L+N +L KG + ++ L+RG C +I+EA
Sbjct: 750 PNQVTYGCFLDILTKGEVDMQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEASE 808
Query: 449 VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLL 508
+ ++ + + + +T +++ L KAI+L+ + D V+Y I G
Sbjct: 809 LITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCC 868
Query: 509 EGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
G +A L ++M + PN T R
Sbjct: 869 VAGEMGKATELRNEMLRQGLIPNNKTSRT 897
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 178/415 (42%), Gaps = 36/415 (8%)
Query: 139 LEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCN 194
LE DEM F+P+ A + +++ L K G+++ + ++K PN +N + +
Sbjct: 317 LEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDS 376
Query: 195 LCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLS 254
LCK + + M + G PN + IL++ FC+ G++ A LG M+ G LS
Sbjct: 377 LCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLS 436
Query: 255 VNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLD 314
V + LI+G + + A +M+ P VVTYTSL+ G+ + A
Sbjct: 437 VYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYH 496
Query: 315 MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG 374
+ +G AP + L+ L + G DA+ +++ + E + P+
Sbjct: 497 EMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNR-------------- 542
Query: 375 RFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
V YN ++ +C+ G ++A + M +KG PD YS+ L+
Sbjct: 543 ------------------VTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLI 584
Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
GLC + EA G+ N +N +T ++ G+ +A+ + + +
Sbjct: 585 HGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVD 644
Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIK 549
LD+V Y V I G L+ + + L +M + P+ Y M+ + K + K
Sbjct: 645 LDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFK 699
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 125/569 (21%), Positives = 231/569 (40%), Gaps = 50/569 (8%)
Query: 44 FPIILAPHIVHSTLLNCPSDLIALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETV 103
FP L+P V L + + A + F + Y H + H++ ++ T V
Sbjct: 4 FPKSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSE-TRMVNHV 62
Query: 104 RGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGR-FGFTPNTFARNIVMD 162
IV + C L ++ Y + M L+ F M FG P + N +++
Sbjct: 63 SRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLN 122
Query: 163 VLFKIGRVDLGIKVLK-----ETQ--LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKG 215
+ + +KV ET PN ++N+ + CK + + + M ++G
Sbjct: 123 AFVEAKQ---WVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEG 179
Query: 216 FYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAG 275
F P+V + ++N K G++ +A +L M G + V + +LIDGF + + A
Sbjct: 180 FKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAM 239
Query: 276 YLWEKMVQNGC-SPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
LW++++++ PNV T+ +I G + + ++ DL ++ LI
Sbjct: 240 ELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHG 299
Query: 335 LSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF------------------ 376
L G+ D A V++ L E K D T+ ++L C G+
Sbjct: 300 LCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNI 359
Query: 377 -------------------SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
+++ +L+ AD Y + C G+ N+A+ +
Sbjct: 360 VSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQE 419
Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
+ G D Y++ ++ LC ++++EA N+ + + + +N+HV A++ LI R
Sbjct: 420 VESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSR 479
Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
+A R VVSY + I GL + G+ EA +M P+ TY +
Sbjct: 480 LGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSI 539
Query: 538 MLLSFCKERNIKMVKRLLQDVIDARIELD 566
+L C++R I + L + + +E D
Sbjct: 540 LLCGLCRDRKIDLALELWHQFLQSGLETD 568
Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 104/501 (20%), Positives = 215/501 (42%), Gaps = 11/501 (2%)
Query: 66 ALSFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLF 125
A F W K+ + DV S+ +I+ + + G+ + + E++ G + +
Sbjct: 168 ARGFLDWMWKE-GFKPDVFSYSTVINDLAK-AGKLDDALELFDEMSERGVAPDVTCYNIL 225
Query: 126 LRIYWRGEMYGMVLEAFDEM-GRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL-- 182
+ + + + + +E +D + PN NI++ L K GRVD +K+ + +
Sbjct: 226 IDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNE 285
Query: 183 --PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAY 240
+ +++ + LC +V + V + + +V + +L FC+ G+I E+
Sbjct: 286 REKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESL 345
Query: 241 QLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGF 300
+L +M S+++ ++ +LI G ++D A +W M G + + TY I G
Sbjct: 346 ELWRIM-EHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGL 404
Query: 301 MEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDS 360
+ A + +ES G D+ + +IDCL K ++A ++ + + + +S
Sbjct: 405 CVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNS 464
Query: 361 YTFCSLLSTVCLSGRF---SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNT 417
+ +L+ + R S + + +V YN L+ CKAG +A
Sbjct: 465 HVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKE 524
Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
ML+ G+ PD ++ LL GLC RKID A+ ++ + + + +H ++ L G+
Sbjct: 525 MLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGK 584
Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
A+ + ++V+Y + G + G + A +++ M + + P+ +Y
Sbjct: 585 LDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNT 644
Query: 538 MLLSFCKERNIKMVKRLLQDV 558
++ C R + D
Sbjct: 645 IMKGLCMCRGVSYAMEFFDDA 665
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 181/390 (46%), Gaps = 5/390 (1%)
Query: 215 GFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMA 274
G P +R + LLN F + + + L T G + ++ + VLI + + + A
Sbjct: 109 GCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKA 168
Query: 275 GYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDC 334
+ M + G P+V +Y+++I +A A D + G APD+ +N+LID
Sbjct: 169 RGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDG 228
Query: 335 LSKMGSYDDALDVYDGLLELKLV-PDSYTFCSLLSTVCLSGRFSLLPKLVCGL---EVEA 390
K + A++++D LLE V P+ T ++S + GR K+ + E E
Sbjct: 229 FLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREK 288
Query: 391 DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVY 450
DL Y++L+ C AG ++A ++N + ++ + D ++ +L G C KI E++ ++
Sbjct: 289 DLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW 348
Query: 451 QGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEG 510
+ I+ + +VN + ++ L+E G+ +A ++R + Y D +Y + I GL
Sbjct: 349 R-IMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVN 407
Query: 511 GRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTS 570
G +A + +++ + Y Y ++ CK++ ++ L++++ +EL+ H
Sbjct: 408 GYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVC 467
Query: 571 IRLTKFIFKFHSSSSAVNQLVEMCNLGLIP 600
L + + A L EM G P
Sbjct: 468 NALIGGLIRDSRLGEASFFLREMGKNGCRP 497
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 174/380 (45%), Gaps = 8/380 (2%)
Query: 249 LGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSI 308
G ++ ++ L++ F ++ L+ G +PN+ TY LIK + K F
Sbjct: 108 FGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEK 167
Query: 309 AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSL-- 366
A FLD + EG PD+ ++ +I+ L+K G DDAL+++D + E + PD + L
Sbjct: 168 ARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILID 227
Query: 367 --LSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFT 424
L L +L+ V ++ +N ++S K G + +K++ M
Sbjct: 228 GFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNERE 287
Query: 425 PDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQL 484
D Y++ L+ GLC A +D+A +V+ + +++ + ++ G+ ++++L
Sbjct: 288 KDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLEL 347
Query: 485 FRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCK 544
+R + K +++VSY + I+GLLE G+ +EA +++ M + TY + + C
Sbjct: 348 WR-IMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCV 406
Query: 545 ERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGL-IPDEM 603
+ ++Q+V + LD + + + K A N + EM G+ + +
Sbjct: 407 NGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHV 466
Query: 604 WRKL--GLLSDETMTPVSLF 621
L GL+ D + S F
Sbjct: 467 CNALIGGLIRDSRLGEASFF 486
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/437 (21%), Positives = 175/437 (40%), Gaps = 47/437 (10%)
Query: 44 FPIILAPHIVHSTLLNCPSDLIALSFFIWC-AKQRDYFHDVQSFDHMISVVTRLTGRFET 102
+P + +I+ S L C + IW KQ + D+ ++ +I + G +
Sbjct: 252 YPNVKTHNIMISGLSKCGR--VDDCLKIWERMKQNEREKDLYTYSSLIHGLCD-AGNVDK 308
Query: 103 VRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMD 162
+ EL I T+ L + R LE + M + N + NI++
Sbjct: 309 AESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIM-EHKNSVNIVSYNILIK 367
Query: 163 VLFKIGRVDLGIKVLKETQLPNF----LSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYP 218
L + G++D + + + ++ I + LC V+ V+ + G +
Sbjct: 368 GLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHL 427
Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
+V + +++C CK R+ EA L+ M G L+ + LI G R RL A +
Sbjct: 428 DVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFL 487
Query: 279 EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDL------------- 325
+M +NGC P VV+Y LI G +A F A +F+ + G PDL
Sbjct: 488 REMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRD 547
Query: 326 ----------------------VFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTF 363
+ HN+LI L +G DDA+ V + + T+
Sbjct: 548 RKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTY 607
Query: 364 CSLLS---TVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLD 420
+L+ V S R +++ + + ++ D++ YN ++ C + A++ ++ +
Sbjct: 608 NTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARN 667
Query: 421 KGFTPDNYSFVGLLRGL 437
G P Y++ L+R +
Sbjct: 668 HGIFPTVYTWNILVRAV 684
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 112/450 (24%), Positives = 204/450 (45%), Gaps = 43/450 (9%)
Query: 128 IYWRG-EMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQL 182
+Y RG E Y V+ + M +PN + N+V+ L K+ VD I+V + L
Sbjct: 163 LYHRGLEFYDYVVNSNMNMN---ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCL 219
Query: 183 PNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQL 242
P+ ++ + LCK + ++ M +G P+ ++ +L++ CK G + +L
Sbjct: 220 PDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKL 279
Query: 243 LGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFME 302
+ M G + + LI G +LD A L E+MV + C PN VTY +LI G ++
Sbjct: 280 VDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVK 339
Query: 303 AKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYT 362
+ + A L +E G+ + ++VLI L K G ++A+ ++ + E P
Sbjct: 340 QRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKP---- 395
Query: 363 FCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKG 422
++VVY+ L+ C+ G PN+A ++ N M+ G
Sbjct: 396 ----------------------------NIVVYSVLVDGLCREGKPNEAKEILNRMIASG 427
Query: 423 FTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAI 482
P+ Y++ L++G +EA+ V++ + + N ++ ++D L GR +A+
Sbjct: 428 CLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAM 487
Query: 483 QLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP---PNAYTYRVML 539
++ + + D V+Y+ I+GL G + A LY +M P P+ TY ++L
Sbjct: 488 MVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILL 547
Query: 540 LSFCKERNIKMVKRLLQDVIDARIELDYHT 569
C +++I LL ++D + D T
Sbjct: 548 DGLCMQKDISRAVDLLNSMLDRGCDPDVIT 577
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 117/520 (22%), Positives = 225/520 (43%), Gaps = 50/520 (9%)
Query: 97 TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEM-GRFGFTPNTF 155
+G F++V ++ + VI ++F++ R Y + + ++ F M F +
Sbjct: 90 SGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVK 149
Query: 156 ARNIVMDVLFKIGRVDLGIKV--------LKETQLPNFLSFNIALCNLCKLNDVSNVKDV 207
+ N V++V+ G G++ + PN LSFN+ + LCKL V +V
Sbjct: 150 SFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEV 209
Query: 208 IGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRR 267
M + P + Y + L+DG +
Sbjct: 210 FRGMPERKCLP-------------------DGY----------------TYCTLMDGLCK 234
Query: 268 LRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVF 327
R+D A L ++M GCSP+ V Y LI G + + +D + +G P+ V
Sbjct: 235 EERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVT 294
Query: 328 HNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE 387
+N LI L G D A+ + + ++ K +P+ T+ +L++ + R + +L+ +E
Sbjct: 295 YNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSME 354
Query: 388 VEA---DLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKID 444
+ +Y+ L+S K G +A+ L+ M +KG P+ + L+ GLC K +
Sbjct: 355 ERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPN 414
Query: 445 EAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAI 504
EA + ++ + NA+ +++++ + G C +A+Q+++ + Y+V I
Sbjct: 415 EAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLI 474
Query: 505 RGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVI---DA 561
GL GR +EA +++S+M I + P+ Y ++ C ++ +L +++ +
Sbjct: 475 DGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEP 534
Query: 562 RIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
+ + D T L + S AV+ L M + G PD
Sbjct: 535 KSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPD 574
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/434 (22%), Positives = 188/434 (43%), Gaps = 39/434 (8%)
Query: 121 TFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKET 180
+F L ++ + +E F M P+ + +MD L K R+D + +L E
Sbjct: 189 SFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM 248
Query: 181 Q----LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRI 236
Q P+ + +N+ + LCK D++ V ++ M KG PN + L++ C G++
Sbjct: 249 QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL 308
Query: 237 AEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSL 296
+A LL M++ + + LI+G + RR A L M + G N Y+ L
Sbjct: 309 DKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVL 368
Query: 297 IKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKL 356
I G + A S + +G P++V ++VL+D L + G ++A ++ + ++
Sbjct: 369 ISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGC 428
Query: 357 VPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYN 416
+P++YT Y++L+ F K G +AV+++
Sbjct: 429 LPNAYT--------------------------------YSSLMKGFFKTGLCEEAVQVWK 456
Query: 417 TMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAG 476
M G + + + + L+ GLCG ++ EA+ V+ ++ + +++I+ L G
Sbjct: 457 EMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIG 516
Query: 477 RCHKAIQLFRRAIVEKYPL---DVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
A++L+ + ++ P DVV+Y + + GL A L + M P+
Sbjct: 517 SMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVI 576
Query: 534 TYRVMLLSFCKERN 547
T L + ++ N
Sbjct: 577 TCNTFLNTLSEKSN 590
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/395 (20%), Positives = 142/395 (35%), Gaps = 88/395 (22%)
Query: 96 LTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTF 155
L G+ + ++ + C+ T+ + + + M G+ N
Sbjct: 304 LKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQH 363
Query: 156 ARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMM 211
++++ LFK G+ + + K+ ++ PN + +++ + LC+ + K+++ M
Sbjct: 364 IYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRM 423
Query: 212 VRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRL 271
+ G PN + L+ F K G EA Q+ M G S + ++VLIDG + R+
Sbjct: 424 IASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRV 483
Query: 272 DMAGYLWEKMVQNG--------------------------------------CSPNVVTY 293
A +W KM+ G P+VVTY
Sbjct: 484 KEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTY 543
Query: 294 TSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLE 353
L+ G K S A L+ + G PD++ N ++ LS+
Sbjct: 544 NILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEK--------------- 588
Query: 354 LKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVK 413
S C GR S L +LV L K + A
Sbjct: 589 --------------SNSCDKGR-SFLEELVVRL----------------LKRQRVSGACT 617
Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAIN 448
+ ML K P ++ ++R +C +KI+ AI+
Sbjct: 618 IVEVMLGKYLAPKTSTWAMIVREICKPKKINAAID 652
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 149 bits (376), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 199/425 (46%), Gaps = 13/425 (3%)
Query: 144 EMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFLS-----FNIALCNLCKL 198
EM G + + ++++D L K GR K L + + ++ ++ +C + K
Sbjct: 302 EMDSLGVSLDNHTYSLLIDGLLK-GRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKE 360
Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
+ K + M+ G P + + L+ +C+ + + Y+LL M +S +
Sbjct: 361 GVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTY 420
Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
++ G LD A + ++M+ +GC PNVV YT+LIK F++ F A L ++
Sbjct: 421 GTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKE 480
Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSL 378
+G APD+ +N LI LSK D+A ++E L P+++T+ + +S + F+
Sbjct: 481 QGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFAS 540
Query: 379 LPKLV-----CGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGL 433
K V CG V + V+ L++ +CK G +A Y +M+D+G D ++ L
Sbjct: 541 ADKYVKEMRECG--VLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVL 598
Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
+ GL K+D+A +++ + A + + +++ + G KA +F + E
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL 658
Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
+V+ Y + + G G E+A L +M + PNA TY ++ +CK ++ R
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFR 718
Query: 554 LLQDV 558
L ++
Sbjct: 719 LFDEM 723
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 120/549 (21%), Positives = 235/549 (42%), Gaps = 62/549 (11%)
Query: 97 TGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFA 156
+G + IV E+ GC + ++ + + +G + EM G P+ F
Sbjct: 430 SGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFC 489
Query: 157 RNIVMDVLFKIGRVDLG----IKVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVIGMMV 212
N ++ L K R+D +++++ PN ++ + + ++ ++ + M
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR 549
Query: 213 RKGFYPNVRMFEILLNCFCKMGRIAEA------------------YQLL--GL------- 245
G PN + L+N +CK G++ EA Y +L GL
Sbjct: 550 ECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVD 609
Query: 246 --------MITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLI 297
M G + V ++ VLI+GF +L + A ++++MV+ G +PNV+ Y L+
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669
Query: 298 KGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLV 357
GF + A LD + +G P+ V + +ID K G +A ++D + LV
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729
Query: 358 PDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVE-----ADLVVYNALLSYFCKAGFPNQAV 412
PDS+ + +L+ C R + + + + + +NAL+++ K G
Sbjct: 730 PDSFVYTTLVDGCC---RLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKT 786
Query: 413 KLYNTMLDKGF----TPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAI 468
++ N ++D F P++ ++ ++ LC ++ A ++ + N +T++
Sbjct: 787 EVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSL 846
Query: 469 VDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQM-KHIA 527
++ + GR + +F AI D + Y+V I L+ G T +A +L QM A
Sbjct: 847 LNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNA 906
Query: 528 VPP----NAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSS 583
V + T R +L F K +++ ++++++++ + D T I L + S
Sbjct: 907 VDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIEL------INES 960
Query: 584 SSAVNQLVE 592
+ NQ VE
Sbjct: 961 CISSNQRVE 969
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 156/682 (22%), Positives = 268/682 (39%), Gaps = 126/682 (18%)
Query: 42 QDFPIILAPHIVHSTL----LNCPSDLIALSFFIWCAKQR------DYFH-------DVQ 84
+ I + P +V S L ++ PS L LSFF W Q+ D F +
Sbjct: 54 SNLSIEINPEVVLSVLRSKRVDDPSKL--LSFFNWVDSQKVTEQKLDSFSFLALDLCNFG 111
Query: 85 SFDHMISVVTRLTGRFETVRGIVGELARVGC--VIKAQTFLLFLRIYWRGEMYGMVLEA- 141
SF+ +SVV R+ R V + + R V K+ +LF ++ G + EA
Sbjct: 112 SFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAV 171
Query: 142 --FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNFL----SFNIALCNL 195
F P +++D L + R+DL V K N + ++++ +
Sbjct: 172 FVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAH 231
Query: 196 CKLNDVSNVKDVI---------------------GMMVRKGFYPNVRMFEILLNCFCKMG 234
C+ +V KDV+ M+ KG P +++L++ CK+
Sbjct: 232 CRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIK 291
Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCS------- 287
R+ +A LL M +LG SL + +++LIDG + R D A L +MV +G +
Sbjct: 292 RLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYD 351
Query: 288 ----------------------------PNVVTYTSLIKGF-------------MEAKMF 306
P Y SLI+G+ +E K
Sbjct: 352 CCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKR 411
Query: 307 SI----------------------AFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDA 344
+I A++ + + + G P++V + LI + + DA
Sbjct: 412 NIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDA 471
Query: 345 LDVYDGLLELKLVPDSYTFCSLLSTVCLSGRF----SLLPKLV-CGLEVEADLVVYNALL 399
+ V + E + PD + + SL+ + + R S L ++V GL+ A Y A +
Sbjct: 472 MRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNA--FTYGAFI 529
Query: 400 SYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPA 459
S + +A A K M + G P+ GL+ C K+ EA + Y+ +V
Sbjct: 530 SGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGIL 589
Query: 460 VNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYIL 519
+A +T +++ L + + A ++FR + DV SY V I G + G ++A +
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSI 649
Query: 520 YSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFK 579
+ +M + PN Y ++L FC+ I+ K LL ++ + + T + K
Sbjct: 650 FDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709
Query: 580 FHSSSSAVNQLVEMCNLGLIPD 601
+ A EM GL+PD
Sbjct: 710 SGDLAEAFRLFDEMKLKGLVPD 731
Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 141/366 (38%), Gaps = 39/366 (10%)
Query: 82 DVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEA 141
DV S+ +I+ ++L G + I E+ G + + L + R E
Sbjct: 626 DVFSYGVLINGFSKL-GNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684
Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCK 197
DEM G PN ++D K G + ++ E +L P+ + + C+
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744
Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLL-----GLMITLGTS 252
LNDV + G +KG + F L+N K G+ ++L G G
Sbjct: 745 LNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKP 803
Query: 253 LSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSF 312
V + ++ID + L+ A L+ +M P V+TYTSL+ G+ + + F
Sbjct: 804 NDV-TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862
Query: 313 LDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCL 372
D + G PD + ++V+I+ K G AL + D + V D C L + C
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDG---CKLSISTC- 918
Query: 373 SGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVG 432
ALLS F K G A K+ M+ + PD+ + +
Sbjct: 919 -----------------------RALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIE 955
Query: 433 LLRGLC 438
L+ C
Sbjct: 956 LINESC 961
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 149 bits (376), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 111/460 (24%), Positives = 209/460 (45%), Gaps = 8/460 (1%)
Query: 118 KAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL 177
K + + + + Y + + + + F+EM GF P + N ++ + +
Sbjct: 93 KFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFF 152
Query: 178 KETQ---LPNFLSFNIALCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMG 234
E + + + SF I + C+ ++ D++ + GF PNV ++ L++ CK G
Sbjct: 153 NENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKG 212
Query: 235 RIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYT 294
I +A L M LG + +TVLI+G + ++EKM ++G PN+ TY
Sbjct: 213 EIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYN 272
Query: 295 SLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLEL 354
++ + AF D + G + ++V +N LI L + ++A V D +
Sbjct: 273 CVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSD 332
Query: 355 KLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVYNALLSYFCKAGFPNQA 411
+ P+ T+ +L+ C G+ L L+ + LV YN L+S FC+ G + A
Sbjct: 333 GINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGA 392
Query: 412 VKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDR 471
K+ M ++G P ++ L+ + +++AI + + + H ++ ++
Sbjct: 393 AKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHG 452
Query: 472 LIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPN 531
G+ ++A +LF+ + + + V Y I G + G + A L +M+ + PN
Sbjct: 453 FCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPN 512
Query: 532 AYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSI 571
+YR M+ CKER K +RL++ +ID+ I D TSI
Sbjct: 513 VASYRYMIEVLCKERKSKEAERLVEKMIDSGI--DPSTSI 550
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 181/387 (46%), Gaps = 7/387 (1%)
Query: 219 NVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLW 278
+V F IL+ C+ G I +++ LL + G S +V +T LIDG + ++ A L+
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 279 EKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKM 338
+M + G N TYT LI G + + F + ++ +G P+L +N +++ L K
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281
Query: 339 GSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLE---VEADLVVY 395
G DA V+D + E + + T+ +L+ +C + + K+V ++ + +L+ Y
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341
Query: 396 NALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVM 455
N L+ FC G +A+ L + +G +P ++ L+ G C A + + +
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE 401
Query: 456 NNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPL--DVVSYTVAIRGLLEGGRT 513
+ +T ++D + KAIQL R +E+ L DV +Y+V I G G+
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQL--RLSMEELGLVPDVHTYSVLIHGFCIKGQM 459
Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRL 573
EA L+ M PN Y M+L +CKE + +LL+++ + + + + +
Sbjct: 460 NEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYM 519
Query: 574 TKFIFKFHSSSSAVNQLVEMCNLGLIP 600
+ + K S A + +M + G+ P
Sbjct: 520 IEVLCKERKSKEAERLVEKMIDSGIDP 546
Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 153/353 (43%), Gaps = 36/353 (10%)
Query: 98 GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
G E + + E+ ++G V +T+ + + ++ + E +++M G PN +
Sbjct: 212 GEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTY 271
Query: 158 NIVMDVLFKIGRVDLGIKVLKETQLP----NFLSFNIALCNLCKLNDVSNVKDVIGMMVR 213
N VM+ L K GR +V E + N +++N + LC+ ++ V+ M
Sbjct: 272 NCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKS 331
Query: 214 KGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDM 273
G PN+ + L++ FC +G++ +A L + + G S S+ + +L+ GF R
Sbjct: 332 DGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSG 391
Query: 274 AGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLID 333
A + ++M + G P+ VTYT LI F + A +E G PD+ ++VLI
Sbjct: 392 AAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIH 451
Query: 334 CLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLV 393
G ++A ++ ++E P+ V
Sbjct: 452 GFCIKGQMNEASRLFKSMVEKNCEPNE--------------------------------V 479
Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
+YN ++ +CK G +A+KL M +K P+ S+ ++ LC RK EA
Sbjct: 480 IYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEA 532
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 113/230 (49%), Gaps = 5/230 (2%)
Query: 143 DEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQL----PNFLSFNIALCNLCKL 198
D+M G PN N ++D +G++ + + ++ + P+ +++NI + C+
Sbjct: 327 DQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRK 386
Query: 199 NDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAW 258
D S ++ M +G P+ + IL++ F + + +A QL M LG V+ +
Sbjct: 387 GDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTY 446
Query: 259 TVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLES 318
+VLI GF +++ A L++ MV+ C PN V Y ++I G+ + A L +E
Sbjct: 447 SVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEE 506
Query: 319 EGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLS 368
+ AP++ + +I+ L K +A + + +++ + P S + SL+S
Sbjct: 507 KELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDP-STSILSLIS 555
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/347 (19%), Positives = 152/347 (43%), Gaps = 4/347 (1%)
Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
+ V+I+ + + + L+++ + +MV NG P + L+ + + F+ +SF + +
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
S+ D+ +LI + G + + D+ L E P+ + +L+ C G
Sbjct: 157 SK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 378 LLPKL---VCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLL 434
L + L + A+ Y L++ K G Q ++Y M + G P+ Y++ ++
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 435 RGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYP 494
LC + +A V+ + + N + ++ L + ++A ++ + +
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335
Query: 495 LDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRL 554
++++Y I G G+ +A L +K + P+ TY +++ FC++ + ++
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 395
Query: 555 LQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
++++ + I+ T L + + A+ + M LGL+PD
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPD 442
Score = 70.1 bits (170), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 133/282 (47%), Gaps = 7/282 (2%)
Query: 296 LIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELK 355
+I G + ++ F+ + + ESE + V+I+ + S + ++ ++ +++
Sbjct: 65 VISGKIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNG 124
Query: 356 LVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYN--ALLSYFCKAGFPNQAVK 413
VP S F LL+ V S F+ + + L VY+ L+ C+AG ++
Sbjct: 125 FVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFD 184
Query: 414 LYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLI 473
L + + GF+P+ + L+ G C +I++A +++ + N +T +++ L
Sbjct: 185 LLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLF 244
Query: 474 EAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAY 533
+ G + +++ + + ++ +Y + L + GRT++A+ ++ +M+ V N
Sbjct: 245 KNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIV 304
Query: 534 TYRVMLLSFCKERNI----KMVKRLLQDVIDARIELDYHTSI 571
TY ++ C+E + K+V ++ D I+ + + Y+T I
Sbjct: 305 TYNTLIGGLCREMKLNEANKVVDQMKSDGINPNL-ITYNTLI 345
Score = 42.7 bits (99), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 82/225 (36%), Gaps = 36/225 (16%)
Query: 377 SLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRG 436
SLL L + +Y +++ + ++ N ++ +N M+D GF P + F LL
Sbjct: 79 SLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTF 138
Query: 437 LCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLD 496
+ G+ + N + N + K LD
Sbjct: 139 VVGS----SSFNQWWSFFNENKS--------------------------------KVVLD 162
Query: 497 VVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQ 556
V S+ + I+G E G E+++ L ++ PN Y ++ CK+ I+ K L
Sbjct: 163 VYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFF 222
Query: 557 DVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
++ + + T L +FK +M G+ P+
Sbjct: 223 EMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPN 267
>sp|Q9SSR4|PPR77_ARATH Pentatricopeptide repeat-containing protein At1g52620
OS=Arabidopsis thaliana GN=At1g52620 PE=2 SV=1
Length = 819
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/432 (26%), Positives = 193/432 (44%), Gaps = 11/432 (2%)
Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLK----ETQLPNFLSFNIA 191
G + +DEM G + + ++ I++ + G+V++G K+++ + +PN + +N
Sbjct: 187 GDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTI 246
Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
+ CKL D+ N V + KGF P + F ++N FCK G + +LL + G
Sbjct: 247 IGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGL 306
Query: 252 SLSVNAWTVLIDG-FRRLRRLDMAGYL-WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIA 309
+SV +ID +R ++D A + W ++ N C P+V TY LI + +A
Sbjct: 307 RVSVWFLNNIIDAKYRHGYKVDPAESIGW--IIANDCKPDVATYNILINRLCKEGKKEVA 364
Query: 310 FSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLST 369
FLD +G P+ + + LI K YD A + + E PD T+ L+
Sbjct: 365 VGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHG 424
Query: 370 VCLSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPD 426
+ +SG + L V D +YN L+S CK G A L++ MLD+ PD
Sbjct: 425 LVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPD 484
Query: 427 NYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFR 486
Y + L+ G + DEA V+ V V+ H A++ +G +A+
Sbjct: 485 AYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMN 544
Query: 487 RAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKER 546
R E D +Y+ I G ++ A ++ M+ PN TY ++ FC +
Sbjct: 545 RMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQG 604
Query: 547 NIKMVKRLLQDV 558
+ KM + +++
Sbjct: 605 DFKMAEETFKEM 616
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/421 (20%), Positives = 170/421 (40%), Gaps = 29/421 (6%)
Query: 142 FDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVLKETQ----LPNFLSFNIALCNLCK 197
DE + G PN + ++ K D+ K+L + P+ +++ I + L
Sbjct: 368 LDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVV 427
Query: 198 LNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNA 257
+ + ++ ++ +G P+ ++ +L++ CK GR A L M+
Sbjct: 428 SGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYV 487
Query: 258 WTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLE 317
+ LIDGF R D A ++ V+ G +VV + ++IKGF + M A + ++ +
Sbjct: 488 YATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMN 547
Query: 318 SEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS 377
E PD ++ +ID K A+ ++ + + K P+ T+ SL++ C G F
Sbjct: 548 EEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFK 607
Query: 378 LLPKLVCGLEVE---ADLVVYNALLSYFCKAGFP-NQAVKLYNTMLDKGFTPDNYSFVGL 433
+ + +++ ++V Y L+ K +AV + M+ P+ +F L
Sbjct: 608 MAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCL 667
Query: 434 LRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKY 493
L+G + G V+ P + H +++ + F R + +
Sbjct: 668 LQGF---------VKKTSGKVLAEPDGSNHGQSSLFS------------EFFHRMKSDGW 706
Query: 494 PLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKR 553
+Y A+ L G + A + +M P+ ++ +L FC N K +
Sbjct: 707 SDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRN 766
Query: 554 L 554
+
Sbjct: 767 M 767
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 151/353 (42%), Gaps = 5/353 (1%)
Query: 218 PNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYL 277
P+V LL+ K R+ +A ++ M G S+ + +L+ G ++++ L
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227
Query: 278 WEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSK 337
E GC PN+V Y ++I G+ + A+ L+ +G P L +I+ K
Sbjct: 228 IEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCK 287
Query: 338 MGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGL----EVEADLV 393
G + + + + E L + +++ G + + P G + + D+
Sbjct: 288 EGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHG-YKVDPAESIGWIIANDCKPDVA 346
Query: 394 VYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGI 453
YN L++ CK G AV + KG P+N S+ L++ C +++ D A + +
Sbjct: 347 TYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQM 406
Query: 454 VMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRT 513
+ + ++ L+ +G A+ + + I D Y + + GL + GR
Sbjct: 407 AERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRF 466
Query: 514 EEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELD 566
A +L+S+M + P+AY Y ++ F + + +++ ++ +++D
Sbjct: 467 LPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVD 519
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 128/312 (41%), Gaps = 4/312 (1%)
Query: 294 TSLIKGFMEAKMFSIAFSFLD-MLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLL 352
+ ++ + E+ S A D ++E PD++ N L+ L K DA VYD +
Sbjct: 138 SHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMC 197
Query: 353 ELKLVPDSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEA---DLVVYNALLSYFCKAGFPN 409
+ D+Y+ C L+ +C G+ + KL+ G + ++V YN ++ +CK G
Sbjct: 198 DRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIE 257
Query: 410 QAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIV 469
A ++ + KGF P +F ++ G C + + + V+ I+
Sbjct: 258 NAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNII 317
Query: 470 DRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVP 529
D G + I DV +Y + I L + G+ E A + +
Sbjct: 318 DAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLI 377
Query: 530 PNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQ 589
PN +Y ++ ++CK + + +LL + + + D T L + AVN
Sbjct: 378 PNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNM 437
Query: 590 LVEMCNLGLIPD 601
V++ + G+ PD
Sbjct: 438 KVKLIDRGVSPD 449
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/495 (22%), Positives = 218/495 (44%), Gaps = 42/495 (8%)
Query: 149 GFTPNTFARNIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNV 204
G P+ + V++ FK G D ++L LP+ +++N + LCK +
Sbjct: 191 GSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKA 250
Query: 205 KDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGTSLSVNAWTVLIDG 264
+V+ MV+ G P+ + +L+ +C G+ EA L M + G V +++L+D
Sbjct: 251 MEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDY 310
Query: 265 FRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPD 324
+ R A +++ M + G P + TY +L++G+ LD++ G PD
Sbjct: 311 LCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPD 370
Query: 325 LVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSGRFS------- 377
++LI +K G D A+ V+ + + L P++ T+ +++ +C SGR
Sbjct: 371 HYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFE 430
Query: 378 ------LLP------KLVCGL------EVEADLVV-------------YNALLSYFCKAG 406
L P L+ GL E +L++ +N+++ CK G
Sbjct: 431 QMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEG 490
Query: 407 FPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHT 466
++ KL+ M+ G P+ ++ L+ G C A K+DEA+ + G+V N ++
Sbjct: 491 RVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYS 550
Query: 467 AIVDRLIEAGRCHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHI 526
+++ + R A+ LF+ D+++Y + ++GL + RT A LY ++
Sbjct: 551 TLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITES 610
Query: 527 AVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSA 586
TY ++L CK + ++ Q++ ++L+ T + + K + A
Sbjct: 611 GTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEA 670
Query: 587 VNQLVEMCNLGLIPD 601
+ V + GL+P+
Sbjct: 671 KDLFVAFSSNGLVPN 685
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 125/540 (23%), Positives = 221/540 (40%), Gaps = 84/540 (15%)
Query: 142 FDEMGRFG---FTPNTFARNIVMDVLFKIGRVDLGIKVLKETQLPNF----LSFNIALCN 194
++ M R G TP+ I++ + GR+DLG L F ++F L
Sbjct: 72 YNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 131
Query: 195 LCKLNDVSNVKD-VIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMIT---LG 250
LC S+ D V+ M G PNV + ILL C R EA +LL +M G
Sbjct: 132 LCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGG 191
Query: 251 TSLSVNAWTVLIDGFR-----------------------------------RLRRLDMAG 275
+ V ++T +I+GF + + +D A
Sbjct: 192 SPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAM 251
Query: 276 YLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCL 335
+ MV+NG P+ +TY S++ G+ + A FL + S+G PD+V +++L+D L
Sbjct: 252 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYL 311
Query: 336 SKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVCLSG-------------RFSLLPK- 381
K G +A ++D + + L P+ T+ +LL G R + P
Sbjct: 312 CKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDH 371
Query: 382 -----LVCGLEVEA-------------------DLVVYNALLSYFCKAGFPNQAVKLYNT 417
L+C + + V Y A++ CK+G A+ +
Sbjct: 372 YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQ 431
Query: 418 MLDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGR 477
M+D+G +P N + L+ GLC K + A + ++ +N +I+D + GR
Sbjct: 432 MIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 491
Query: 478 CHKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRV 537
++ +LF + +V++Y I G G+ +EA L S M + + PN TY
Sbjct: 492 VIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYST 551
Query: 538 MLLSFCKERNIKMVKRLLQDVIDARIELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLG 597
++ +CK ++ L +++ + + D T + + +F+ +++A V + G
Sbjct: 552 LINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESG 611
Score = 133 bits (335), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/470 (21%), Positives = 209/470 (44%), Gaps = 8/470 (1%)
Query: 76 QRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMY 135
R DV +++ +I+ + + + ++ + + G + T+ L Y
Sbjct: 224 DRGILPDVVTYNSIIAALCKAQA-MDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQP 282
Query: 136 GMVLEAFDEMGRFGFTPNTFARNIVMDVLFKIGRVDLGIKVL----KETQLPNFLSFNIA 191
+ +M G P+ +++MD L K GR K+ K P ++
Sbjct: 283 KEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTL 342
Query: 192 LCNLCKLNDVSNVKDVIGMMVRKGFYPNVRMFEILLNCFCKMGRIAEAYQLLGLMITLGT 251
L + + ++ +MVR G +P+ +F IL+ + K G++ +A + M G
Sbjct: 343 LQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 402
Query: 252 SLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIKGFMEAKMFSIAFS 311
+ + + +I + R++ A +E+M+ G SP + Y SLI G + A
Sbjct: 403 NPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEE 462
Query: 312 FLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVPDSYTFCSLLSTVC 371
+ + G + +F N +ID K G ++ +++ ++ + + P+ T+ +L++ C
Sbjct: 463 LILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYC 522
Query: 372 LSGRFSLLPKLVCGL---EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNY 428
L+G+ KL+ G+ ++ + V Y+ L++ +CK A+ L+ M G +PD
Sbjct: 523 LAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDII 582
Query: 429 SFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRA 488
++ +L+GL R+ A +Y I + + + I+ L + A+Q+F+
Sbjct: 583 TYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNL 642
Query: 489 IVEKYPLDVVSYTVAIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVM 538
+ L+ ++ + I LL+ GR +EA L+ + PN +TYR+M
Sbjct: 643 CLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 692
Score = 102 bits (255), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 90/459 (19%), Positives = 189/459 (41%), Gaps = 72/459 (15%)
Query: 98 GRFETVRGIVGELARVGCVIKAQTFLLFLRIYWRGEMYGMVLEAFDEMGRFGFTPNTFAR 157
G + G++ + R G F + + Y + + F +M + G PN
Sbjct: 350 GALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTY 409
Query: 158 NIVMDVLFKIGRVDLGI----KVLKETQLPNFLSFNIALCNLCKLNDVSNVKDVI----- 208
V+ +L K GRV+ + +++ E P + +N + LC N +++I
Sbjct: 410 GAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLD 469
Query: 209 ------------------------------GMMVRKGFYPNVRMFEILLNCFCKMGRIAE 238
+MVR G PNV + L+N +C G++ E
Sbjct: 470 RGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDE 529
Query: 239 AYQLLGLMITLGTSLSVNAWTVLIDGFRRLRRLDMAGYLWEKMVQNGCSPNVVTYTSLIK 298
A +LL M+++G + ++ LI+G+ ++ R++ A L+++M +G SP+++TY +++
Sbjct: 530 AMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQ 589
Query: 299 GFMEAKMFSIAFSFLDMLESEGHAPDLVFHNVLIDCLSKMGSYDDALDVYDGLLELKLVP 358
G + + + A + G +L +N+++ L K DDAL ++ L
Sbjct: 590 GLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNL------- 642
Query: 359 DSYTFCSLLSTVCLSGRFSLLPKLVCGLEVEADLVVYNALLSYFCKAGFPNQAVKLYNTM 418
C ++++ + +N ++ K G ++A L+
Sbjct: 643 -------------------------CLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAF 677
Query: 419 LDKGFTPDNYSFVGLLRGLCGARKIDEAINVYQGIVMNNPAVNAHVHTAIVDRLIEAGRC 478
G P+ +++ + + G ++E ++ + N V++ + IV L++ G
Sbjct: 678 SSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEI 737
Query: 479 HKAIQLFRRAIVEKYPLDVVSYTVAIRGLLEGGRTEEAY 517
+A + + L+ + ++ I LL GG+ +E Y
Sbjct: 738 TRAGTYLSMIDEKHFSLEASTASLFI-DLLSGGKYQEYY 775
Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 98/219 (44%), Gaps = 4/219 (1%)
Query: 387 EVEADLVVYNALLSYFCKAGFPNQAVKLYNTMLDKGFTPDNYSFVGLLRGLCGARKIDEA 446
EV DL Y L+ C+AG + ++ KGF D +F LL+GLC ++ +A
Sbjct: 82 EVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 141
Query: 447 IN-VYQGIVMNNPAVNAHVHTAIVDRLIEAGRCHKAIQLFRRAIVEK---YPLDVVSYTV 502
++ V + + N + ++ L + R +A++L ++ P DVVSYT
Sbjct: 142 MDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTT 201
Query: 503 AIRGLLEGGRTEEAYILYSQMKHIAVPPNAYTYRVMLLSFCKERNIKMVKRLLQDVIDAR 562
I G + G +++AY Y +M + P+ TY ++ + CK + + +L ++
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261
Query: 563 IELDYHTSIRLTKFIFKFHSSSSAVNQLVEMCNLGLIPD 601
+ D T + A+ L +M + G+ PD
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPD 300
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.328 0.142 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 231,503,267
Number of Sequences: 539616
Number of extensions: 9563415
Number of successful extensions: 34950
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 376
Number of HSP's successfully gapped in prelim test: 95
Number of HSP's that attempted gapping in prelim test: 25425
Number of HSP's gapped (non-prelim): 2816
length of query: 645
length of database: 191,569,459
effective HSP length: 124
effective length of query: 521
effective length of database: 124,657,075
effective search space: 64946336075
effective search space used: 64946336075
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 65 (29.6 bits)