Query 006440
Match_columns 645
No_of_seqs 693 out of 4911
Neff 9.1
Searched_HMMs 29240
Date Tue Mar 26 01:04:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006440.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006440hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rp8_A Flavoprotein monooxygen 100.0 1.7E-42 5.8E-47 372.1 36.0 369 73-467 19-388 (407)
2 4hb9_A Similarities with proba 100.0 6.7E-41 2.3E-45 359.7 31.1 348 78-438 2-380 (412)
3 2xdo_A TETX2 protein; tetracyc 100.0 4.3E-37 1.5E-41 328.9 34.2 339 74-436 23-379 (398)
4 2vou_A 2,6-dihydroxypyridine h 100.0 6.7E-37 2.3E-41 327.3 34.7 330 76-439 4-365 (397)
5 3fmw_A Oxygenase; mithramycin, 100.0 3.3E-38 1.1E-42 350.7 22.2 373 76-485 48-431 (570)
6 2qa2_A CABE, polyketide oxygen 100.0 7.1E-37 2.4E-41 335.6 30.4 332 75-439 10-347 (499)
7 2qa1_A PGAE, polyketide oxygen 100.0 9.1E-37 3.1E-41 334.8 30.7 333 74-439 8-346 (500)
8 2x3n_A Probable FAD-dependent 100.0 2.9E-37 9.9E-42 330.5 23.5 341 76-439 5-356 (399)
9 3c96_A Flavin-containing monoo 100.0 8.2E-36 2.8E-40 320.3 34.8 335 76-436 3-366 (410)
10 1pn0_A Phenol 2-monooxygenase; 100.0 1.7E-35 6E-40 334.6 30.4 334 77-439 8-420 (665)
11 3alj_A 2-methyl-3-hydroxypyrid 100.0 1.9E-36 6.6E-41 321.8 18.6 323 76-435 10-343 (379)
12 3ihg_A RDME; flavoenzyme, anth 100.0 8.3E-35 2.9E-39 323.2 29.0 341 76-438 4-369 (535)
13 2r0c_A REBC; flavin adenine di 100.0 2.1E-34 7.3E-39 320.0 31.4 338 75-438 24-377 (549)
14 1k0i_A P-hydroxybenzoate hydro 100.0 3.4E-35 1.2E-39 313.9 20.1 373 77-481 2-387 (394)
15 2dkh_A 3-hydroxybenzoate hydro 100.0 1.8E-33 6.2E-38 317.7 29.1 336 76-437 31-409 (639)
16 3i3l_A Alkylhalidase CMLS; fla 100.0 1E-31 3.6E-36 298.8 31.3 349 74-439 20-378 (591)
17 3e1t_A Halogenase; flavoprotei 100.0 1.7E-31 5.8E-36 294.6 32.0 343 76-437 6-364 (512)
18 3oz2_A Digeranylgeranylglycero 100.0 5E-31 1.7E-35 281.1 30.8 327 75-430 2-338 (397)
19 3c4a_A Probable tryptophan hyd 100.0 4.4E-32 1.5E-36 288.3 15.7 338 78-466 1-353 (381)
20 3atr_A Conserved archaeal prot 100.0 6.3E-31 2.2E-35 285.8 23.7 331 76-439 5-352 (453)
21 3cgv_A Geranylgeranyl reductas 100.0 3.7E-29 1.3E-33 267.0 31.2 332 76-437 3-345 (397)
22 3nix_A Flavoprotein/dehydrogen 100.0 4.1E-29 1.4E-33 269.1 29.3 335 76-433 4-350 (421)
23 2pyx_A Tryptophan halogenase; 100.0 5.5E-27 1.9E-31 259.4 30.1 331 76-437 6-410 (526)
24 2gmh_A Electron transfer flavo 100.0 2E-26 6.8E-31 257.1 31.2 328 76-427 34-409 (584)
25 2weu_A Tryptophan 5-halogenase 99.9 6.9E-26 2.4E-30 250.0 28.7 325 77-437 2-402 (511)
26 3ihm_A Styrene monooxygenase A 99.9 2.1E-26 7E-31 248.3 19.1 326 76-436 21-372 (430)
27 2aqj_A Tryptophan halogenase, 99.9 1.2E-25 4.2E-30 249.4 25.3 325 76-435 4-392 (538)
28 2e4g_A Tryptophan halogenase; 99.9 3.6E-25 1.2E-29 246.0 27.6 328 76-437 24-425 (550)
29 2bry_A NEDD9 interacting prote 99.8 1.2E-19 4.1E-24 198.6 19.4 136 76-250 91-236 (497)
30 4h87_A Kanadaptin; FHA domain 99.8 2.1E-19 7E-24 157.8 10.0 97 527-637 18-125 (130)
31 3va4_A Mediator of DNA damage 99.8 2.4E-18 8.1E-23 151.3 10.7 99 530-642 26-126 (132)
32 1uht_A Expressed protein; FHA 99.7 5E-18 1.7E-22 147.4 10.9 95 529-637 12-107 (118)
33 3gqs_A Adenylate cyclase-like 99.7 7.4E-18 2.5E-22 143.3 10.7 97 527-640 2-100 (106)
34 2pie_A E3 ubiquitin-protein li 99.7 5.6E-18 1.9E-22 151.1 10.4 95 524-634 4-103 (138)
35 2kb3_A Oxoglutarate dehydrogen 99.7 1E-17 3.5E-22 149.3 11.1 97 525-641 42-139 (143)
36 2xt9_B Putative signal transdu 99.7 2.3E-17 7.9E-22 142.3 11.8 92 529-640 12-103 (115)
37 3els_A PRE-mRNA leakage protei 99.7 6.4E-18 2.2E-22 153.1 8.5 101 527-635 29-146 (158)
38 1yvv_A Amine oxidase, flavin-c 99.7 5.7E-16 2E-20 160.8 23.8 297 77-403 2-329 (336)
39 3po8_A RV0020C protein, putati 99.7 1.8E-17 6.1E-22 139.4 9.0 81 542-640 15-95 (100)
40 2csw_A Ubiquitin ligase protei 99.7 1.2E-17 4E-22 150.2 7.8 95 524-634 12-111 (145)
41 2kfu_A RV1827 PThr 22; FHA dom 99.7 5.1E-17 1.7E-21 147.5 11.1 94 528-641 55-148 (162)
42 1lgp_A Cell cycle checkpoint p 99.7 4.8E-17 1.6E-21 140.8 10.3 91 529-635 3-97 (116)
43 1mzk_A Kinase associated prote 99.7 8.1E-17 2.8E-21 143.7 12.0 89 541-641 18-118 (139)
44 2jpe_A Nuclear inhibitor of pr 99.7 6.9E-18 2.4E-22 151.0 5.0 98 528-640 33-133 (140)
45 1dmz_A Protein (protein kinase 99.7 2.8E-17 9.6E-22 149.6 9.0 93 528-634 3-116 (158)
46 1gxc_A CHK2, CDS1, serine/thre 99.7 8.8E-17 3E-21 145.2 11.2 98 524-639 24-136 (149)
47 3oun_A Putative uncharacterize 99.7 5.2E-17 1.8E-21 145.6 8.9 81 542-640 77-157 (157)
48 1qu5_A Protein kinase SPK1; FH 99.7 4.8E-17 1.6E-21 150.9 8.5 102 525-640 24-145 (182)
49 2jqj_A DNA damage response pro 99.7 7.1E-17 2.4E-21 146.3 9.2 85 542-641 29-121 (151)
50 3elv_A PRE-mRNA leakage protei 99.7 3.3E-17 1.1E-21 152.2 7.0 101 527-635 76-193 (205)
51 1r21_A Antigen KI-67; beta san 99.7 7E-17 2.4E-21 142.3 7.7 83 542-641 25-107 (128)
52 3hx1_A SLR1951 protein; P74513 99.7 1.4E-16 4.8E-21 140.2 9.4 84 542-642 22-115 (131)
53 1wln_A Afadin; beta sandwich, 99.6 6E-16 2.1E-20 134.4 11.5 84 542-641 28-113 (120)
54 1g6g_A Protein kinase RAD53; b 99.6 6.7E-16 2.3E-20 135.6 8.6 70 555-635 37-108 (127)
55 1g3g_A Protien kinase SPK1; FH 99.6 9.2E-16 3.2E-20 140.6 8.8 95 527-634 31-135 (164)
56 3fm8_A Kinesin-like protein KI 99.5 3.1E-14 1.1E-18 122.9 11.2 97 528-640 25-122 (124)
57 2ff4_A Probable regulatory pro 99.5 3.2E-14 1.1E-18 150.3 9.3 83 542-641 298-380 (388)
58 4ejq_A Kinesin-like protein KI 99.5 1.5E-13 5.2E-18 124.2 11.3 95 530-640 39-142 (154)
59 3huf_A DNA repair and telomere 99.5 9.6E-14 3.3E-18 135.9 10.1 95 529-636 1-107 (325)
60 1ryi_A Glycine oxidase; flavop 99.5 4.1E-13 1.4E-17 141.8 14.2 194 185-399 159-361 (382)
61 2gag_B Heterotetrameric sarcos 99.4 5.3E-12 1.8E-16 134.3 18.0 65 185-250 169-237 (405)
62 1y56_B Sarcosine oxidase; dehy 99.4 3.3E-12 1.1E-16 134.9 14.5 65 185-250 144-212 (382)
63 3kkj_A Amine oxidase, flavin-c 99.3 4.9E-12 1.7E-16 126.3 13.3 35 77-111 2-36 (336)
64 3ps9_A TRNA 5-methylaminomethy 99.3 6.3E-11 2.2E-15 134.6 22.2 62 184-245 411-474 (676)
65 3pvc_A TRNA 5-methylaminomethy 99.3 1.7E-11 5.7E-16 139.6 16.8 62 184-245 406-470 (689)
66 2gf3_A MSOX, monomeric sarcosi 99.3 3.5E-11 1.2E-15 127.2 17.6 166 77-245 3-206 (389)
67 3dme_A Conserved exported prot 99.3 3.7E-10 1.3E-14 118.2 23.5 66 185-250 145-216 (369)
68 2oln_A NIKD protein; flavoprot 99.3 3.8E-10 1.3E-14 119.7 23.5 65 185-250 148-215 (397)
69 2qcu_A Aerobic glycerol-3-phos 99.3 4E-10 1.4E-14 123.4 23.1 65 185-249 144-216 (501)
70 3nyc_A D-arginine dehydrogenas 99.2 3.2E-10 1.1E-14 119.3 20.1 66 184-250 148-216 (381)
71 3kt9_A Aprataxin; FHA domain, 99.2 1E-10 3.5E-15 96.2 10.8 89 530-637 5-95 (102)
72 3uv0_A Mutator 2, isoform B; F 99.2 2.1E-11 7.1E-16 97.6 5.6 75 543-635 13-94 (102)
73 3v76_A Flavoprotein; structura 99.2 3.1E-10 1.1E-14 120.8 15.1 146 74-244 24-187 (417)
74 4a0e_A YSCD, type III secretio 99.1 1.3E-10 4.4E-15 98.3 9.2 93 528-640 3-96 (123)
75 1rp0_A ARA6, thiazole biosynth 99.1 1E-09 3.6E-14 110.7 15.6 138 76-250 38-197 (284)
76 2i0z_A NAD(FAD)-utilizing dehy 99.1 8.5E-11 2.9E-15 126.8 7.3 158 76-244 25-191 (447)
77 3nlc_A Uncharacterized protein 99.1 5.5E-10 1.9E-14 122.3 13.7 58 188-245 218-278 (549)
78 3dje_A Fructosyl amine: oxygen 99.1 9.1E-10 3.1E-14 118.4 15.2 61 185-245 156-222 (438)
79 3jsk_A Cypbp37 protein; octame 99.1 1.7E-09 5.8E-14 110.5 14.7 138 76-250 78-257 (344)
80 2uzz_A N-methyl-L-tryptophan o 99.0 7.1E-10 2.4E-14 116.4 12.3 60 185-245 144-205 (372)
81 3da1_A Glycerol-3-phosphate de 99.0 1.8E-09 6E-14 119.6 15.4 66 185-250 165-239 (561)
82 1qo8_A Flavocytochrome C3 fuma 99.0 1.7E-09 5.9E-14 120.1 14.7 63 188-250 248-318 (566)
83 3axb_A Putative oxidoreductase 99.0 6E-09 2E-13 112.4 18.4 66 184-250 175-261 (448)
84 2cul_A Glucose-inhibited divis 99.0 2.1E-09 7.4E-14 105.0 13.2 125 76-250 2-131 (232)
85 3i6d_A Protoporphyrinogen oxid 99.0 6E-09 2E-13 112.9 17.9 56 191-246 236-291 (470)
86 3k30_A Histamine dehydrogenase 99.0 1.6E-10 5.4E-15 131.5 5.6 92 17-110 328-424 (690)
87 2brf_A Bifunctional polynucleo 99.0 2.6E-09 9E-14 88.6 11.3 88 528-634 8-98 (110)
88 3ces_A MNMG, tRNA uridine 5-ca 99.0 3.8E-09 1.3E-13 116.6 15.0 154 76-249 27-186 (651)
89 3i6u_A CDS1, serine/threonine- 99.0 6.6E-10 2.3E-14 118.8 8.7 96 526-639 6-116 (419)
90 1y0p_A Fumarate reductase flav 99.0 7.7E-09 2.6E-13 115.0 17.3 62 189-250 254-323 (571)
91 3c4n_A Uncharacterized protein 98.9 1.5E-09 5.1E-14 115.5 10.0 65 185-250 167-244 (405)
92 2ywl_A Thioredoxin reductase r 98.9 4.9E-09 1.7E-13 98.0 12.2 113 78-250 2-116 (180)
93 4a9w_A Monooxygenase; baeyer-v 98.9 2.7E-09 9.1E-14 111.0 11.3 128 76-245 2-133 (357)
94 3cp8_A TRNA uridine 5-carboxym 98.9 4.4E-09 1.5E-13 116.1 13.5 151 76-247 20-177 (641)
95 2gqf_A Hypothetical protein HI 98.9 3.1E-09 1E-13 112.6 11.8 144 76-244 3-168 (401)
96 2zxi_A TRNA uridine 5-carboxym 98.9 9.1E-09 3.1E-13 113.1 15.2 154 76-249 26-185 (637)
97 3ab1_A Ferredoxin--NADP reduct 98.9 3.4E-09 1.2E-13 110.8 11.3 123 75-250 12-137 (360)
98 2zbw_A Thioredoxin reductase; 98.9 3.5E-09 1.2E-13 109.3 11.2 122 76-250 4-127 (335)
99 2gv8_A Monooxygenase; FMO, FAD 98.9 2E-09 6.9E-14 116.0 9.5 61 186-246 111-179 (447)
100 1yj5_C 5' polynucleotide kinas 98.9 6E-09 2.1E-13 89.5 9.4 88 528-634 8-98 (143)
101 1ps9_A 2,4-dienoyl-COA reducta 98.9 1.4E-09 4.7E-14 123.4 6.7 93 16-110 313-406 (671)
102 3fbs_A Oxidoreductase; structu 98.9 1E-08 3.5E-13 103.7 12.2 111 77-246 2-114 (297)
103 4dgk_A Phytoene dehydrogenase; 98.9 2.2E-07 7.5E-12 101.5 23.7 47 204-250 237-284 (501)
104 1d4d_A Flavocytochrome C fumar 98.9 8.7E-08 3E-12 106.4 20.2 62 189-250 254-323 (572)
105 1ujx_A Polynucleotide kinase 3 98.8 4.9E-09 1.7E-13 88.1 7.5 89 528-634 15-105 (119)
106 1w4x_A Phenylacetone monooxyge 98.8 6.6E-09 2.2E-13 114.8 10.8 137 76-247 15-157 (542)
107 1o94_A Tmadh, trimethylamine d 98.8 1.2E-09 4.2E-14 124.7 4.8 93 16-110 324-422 (729)
108 4ap3_A Steroid monooxygenase; 98.8 6.7E-09 2.3E-13 114.5 10.0 136 75-245 19-160 (549)
109 3nrn_A Uncharacterized protein 98.8 1.9E-07 6.4E-12 99.7 20.0 55 191-247 190-246 (421)
110 2gjc_A Thiazole biosynthetic e 98.8 5.8E-08 2E-12 98.7 15.0 138 76-250 64-245 (326)
111 3qj4_A Renalase; FAD/NAD(P)-bi 98.8 3.2E-08 1.1E-12 102.5 13.3 52 191-243 113-164 (342)
112 1pj5_A N,N-dimethylglycine oxi 98.8 2.4E-08 8.4E-13 116.0 13.6 62 185-247 146-210 (830)
113 3gwf_A Cyclohexanone monooxyge 98.8 1.5E-08 5.1E-13 111.5 10.9 137 76-247 7-150 (540)
114 1c0p_A D-amino acid oxidase; a 98.8 6.1E-08 2.1E-12 101.3 15.2 36 75-110 4-39 (363)
115 1kf6_A Fumarate reductase flav 98.8 7.2E-08 2.5E-12 107.4 16.2 61 190-250 134-203 (602)
116 3itj_A Thioredoxin reductase 1 98.8 1.1E-08 3.9E-13 105.4 8.9 121 74-246 19-144 (338)
117 2xve_A Flavin-containing monoo 98.8 1.5E-08 5.1E-13 109.6 9.9 150 78-247 3-169 (464)
118 2q0l_A TRXR, thioredoxin reduc 98.8 3.6E-08 1.2E-12 100.6 12.0 113 78-247 2-117 (311)
119 3lzw_A Ferredoxin--NADP reduct 98.7 5.2E-08 1.8E-12 100.1 12.4 114 77-244 7-123 (332)
120 4fk1_A Putative thioredoxin re 98.7 5.7E-08 1.9E-12 98.9 12.5 36 74-109 3-38 (304)
121 3f8d_A Thioredoxin reductase ( 98.7 3.9E-08 1.3E-12 100.6 11.1 110 76-245 14-126 (323)
122 3uox_A Otemo; baeyer-villiger 98.7 1.8E-08 6E-13 111.0 8.9 137 76-247 8-150 (545)
123 3ka7_A Oxidoreductase; structu 98.7 9.2E-07 3.1E-11 94.3 21.9 57 190-247 196-255 (425)
124 4egx_A Kinesin-like protein KI 98.7 1.1E-07 3.9E-12 87.9 12.4 97 531-640 70-172 (184)
125 3lov_A Protoporphyrinogen oxid 98.7 2.6E-07 8.8E-12 100.3 16.9 56 191-247 237-292 (475)
126 1vdc_A NTR, NADPH dependent th 98.7 2.5E-08 8.5E-13 102.8 8.1 118 76-246 7-126 (333)
127 3cty_A Thioredoxin reductase; 98.7 8.2E-08 2.8E-12 98.3 11.8 112 75-245 14-127 (319)
128 2q7v_A Thioredoxin reductase; 98.6 1.3E-07 4.5E-12 97.0 11.6 112 76-245 7-124 (325)
129 3d1c_A Flavin-containing putat 98.6 1.9E-07 6.3E-12 97.6 12.8 138 76-245 3-144 (369)
130 4at0_A 3-ketosteroid-delta4-5a 98.6 5.8E-07 2E-11 98.4 16.9 37 75-111 39-75 (510)
131 3s5w_A L-ornithine 5-monooxyge 98.6 2E-07 7E-12 100.7 12.3 148 76-244 29-192 (463)
132 1chu_A Protein (L-aspartate ox 98.6 1.6E-07 5.4E-12 103.4 11.3 35 76-111 7-41 (540)
133 1fl2_A Alkyl hydroperoxide red 98.6 1.6E-07 5.6E-12 95.6 10.5 111 77-245 1-116 (310)
134 2a87_A TRXR, TR, thioredoxin r 98.6 1.4E-07 4.8E-12 97.3 9.8 113 75-245 12-127 (335)
135 2e5v_A L-aspartate oxidase; ar 98.6 6.3E-07 2.2E-11 96.9 15.3 31 79-109 1-31 (472)
136 1trb_A Thioredoxin reductase; 98.6 1.5E-07 5.2E-12 96.2 9.8 113 76-246 4-118 (320)
137 4a5l_A Thioredoxin reductase; 98.5 3.4E-07 1.2E-11 93.3 11.0 117 76-244 3-121 (314)
138 2rgh_A Alpha-glycerophosphate 98.5 1.6E-06 5.4E-11 96.1 17.0 64 186-249 184-256 (571)
139 2h88_A Succinate dehydrogenase 98.5 2.3E-06 7.8E-11 95.3 18.0 36 76-111 17-52 (621)
140 2wdq_A Succinate dehydrogenase 98.5 2.2E-06 7.6E-11 95.2 17.4 36 76-111 6-41 (588)
141 1hyu_A AHPF, alkyl hydroperoxi 98.4 8.9E-07 3E-11 97.1 12.2 112 76-245 211-327 (521)
142 3k7m_X 6-hydroxy-L-nicotine ox 98.4 1.9E-07 6.4E-12 100.0 6.6 48 194-243 211-258 (431)
143 3g3e_A D-amino-acid oxidase; F 98.4 1E-07 3.4E-12 99.2 4.2 34 78-111 1-40 (351)
144 2ivd_A PPO, PPOX, protoporphyr 98.4 5.1E-07 1.7E-11 98.0 10.0 55 191-246 239-296 (478)
145 1wv3_A Similar to DNA segregat 98.4 2E-07 6.7E-12 90.5 5.5 68 555-639 93-166 (238)
146 2a8x_A Dihydrolipoyl dehydroge 98.4 6.7E-07 2.3E-11 96.7 10.0 140 77-247 3-149 (464)
147 2bs2_A Quinol-fumarate reducta 98.4 5.3E-06 1.8E-10 93.0 17.3 36 76-111 4-39 (660)
148 1v59_A Dihydrolipoamide dehydr 98.4 9.8E-07 3.3E-11 95.8 10.6 35 76-110 4-38 (478)
149 3ics_A Coenzyme A-disulfide re 98.4 1.4E-06 4.7E-11 97.2 11.9 132 57-244 15-152 (588)
150 3cgb_A Pyridine nucleotide-dis 98.4 1.1E-06 3.7E-11 95.4 10.6 133 57-245 15-153 (480)
151 1s3e_A Amine oxidase [flavin-c 98.3 1.8E-06 6.3E-11 94.7 12.2 54 191-245 216-269 (520)
152 1ojt_A Surface protein; redox- 98.3 2.2E-06 7.4E-11 93.1 11.0 35 76-110 5-39 (482)
153 4gut_A Lysine-specific histone 98.3 5.1E-06 1.7E-10 94.8 13.7 40 204-243 545-584 (776)
154 1dxl_A Dihydrolipoamide dehydr 98.2 3.4E-06 1.2E-10 91.3 11.0 35 76-110 5-39 (470)
155 3r9u_A Thioredoxin reductase; 98.2 3.6E-06 1.2E-10 85.5 10.1 111 76-244 3-118 (315)
156 1q1r_A Putidaredoxin reductase 98.2 2.8E-06 9.6E-11 90.8 9.4 111 77-246 4-116 (431)
157 3klj_A NAD(FAD)-dependent dehy 98.2 6.6E-06 2.3E-10 86.4 11.4 109 75-243 7-115 (385)
158 1jnr_A Adenylylsulfate reducta 98.2 3.5E-05 1.2E-09 86.4 17.5 36 76-111 21-60 (643)
159 1ebd_A E3BD, dihydrolipoamide 98.1 5.2E-06 1.8E-10 89.4 9.2 33 77-109 3-35 (455)
160 3iwa_A FAD-dependent pyridine 98.1 5.2E-06 1.8E-10 89.9 9.2 35 77-111 3-39 (472)
161 3gyx_A Adenylylsulfate reducta 98.1 2.6E-05 8.9E-10 87.4 15.0 36 76-111 21-62 (662)
162 2bc0_A NADH oxidase; flavoprot 98.1 1E-05 3.6E-10 87.9 10.3 34 77-110 35-71 (490)
163 4gcm_A TRXR, thioredoxin reduc 98.1 2.6E-06 9E-11 86.7 5.1 34 76-109 5-38 (312)
164 3qfa_A Thioredoxin reductase 1 98.0 3.4E-05 1.2E-09 84.4 13.9 37 74-110 29-65 (519)
165 3oc4_A Oxidoreductase, pyridin 98.0 1.1E-05 3.8E-10 86.8 9.8 33 78-110 3-37 (452)
166 3ntd_A FAD-dependent pyridine 98.0 1.3E-05 4.6E-10 88.7 10.6 110 78-243 2-116 (565)
167 3sx6_A Sulfide-quinone reducta 98.0 8.5E-06 2.9E-10 87.2 8.1 33 78-110 5-40 (437)
168 3kd9_A Coenzyme A disulfide re 98.0 1.6E-05 5.6E-10 85.3 10.3 34 77-110 3-38 (449)
169 1zmd_A Dihydrolipoyl dehydroge 98.0 2E-05 7E-10 85.2 10.9 35 76-110 5-39 (474)
170 3ef6_A Toluene 1,2-dioxygenase 98.0 1.9E-05 6.6E-10 83.7 10.3 34 78-111 3-38 (410)
171 4b63_A L-ornithine N5 monooxyg 98.0 4.3E-05 1.5E-09 83.1 13.0 57 186-242 141-212 (501)
172 2v3a_A Rubredoxin reductase; a 98.0 3.3E-05 1.1E-09 81.1 11.8 101 77-246 145-245 (384)
173 2gqw_A Ferredoxin reductase; f 98.0 1.6E-05 5.5E-10 84.2 9.3 35 76-110 6-42 (408)
174 3lxd_A FAD-dependent pyridine 98.0 1.4E-05 4.7E-10 85.0 8.6 35 76-110 8-44 (415)
175 3l8k_A Dihydrolipoyl dehydroge 97.9 4E-05 1.4E-09 82.7 12.1 35 76-110 3-37 (466)
176 2yqu_A 2-oxoglutarate dehydrog 97.9 4.7E-05 1.6E-09 81.9 12.3 100 77-246 167-266 (455)
177 2cdu_A NADPH oxidase; flavoenz 97.9 2.5E-05 8.5E-10 84.0 10.1 33 78-110 1-35 (452)
178 1nhp_A NADH peroxidase; oxidor 97.9 3.8E-05 1.3E-09 82.4 11.2 33 78-110 1-35 (447)
179 3fpz_A Thiazole biosynthetic e 97.9 5.8E-06 2E-10 84.8 4.1 36 76-111 64-101 (326)
180 3h28_A Sulfide-quinone reducta 97.9 3.1E-05 1E-09 82.7 9.7 33 78-110 3-37 (430)
181 3ayj_A Pro-enzyme of L-phenyla 97.9 5.2E-06 1.8E-10 92.9 3.7 75 31-110 14-97 (721)
182 3g5s_A Methylenetetrahydrofola 97.9 1.1E-05 3.7E-10 83.0 5.4 33 78-110 2-34 (443)
183 3dgz_A Thioredoxin reductase 2 97.9 8E-05 2.7E-09 80.8 12.8 35 76-110 5-39 (488)
184 2eq6_A Pyruvate dehydrogenase 97.9 7.7E-05 2.6E-09 80.4 12.5 101 77-247 169-274 (464)
185 3fg2_P Putative rubredoxin red 97.8 4.6E-05 1.6E-09 80.6 10.2 33 78-110 2-36 (404)
186 1xhc_A NADH oxidase /nitrite r 97.8 4.3E-05 1.5E-09 79.7 9.7 33 77-110 8-40 (367)
187 1m6i_A Programmed cell death p 97.8 7.6E-06 2.6E-10 89.0 4.1 36 75-110 9-46 (493)
188 3dgh_A TRXR-1, thioredoxin red 97.8 0.00012 4.1E-09 79.3 13.5 35 75-109 7-41 (483)
189 4gde_A UDP-galactopyranose mut 97.8 8.9E-06 3E-10 88.9 4.3 53 190-244 222-276 (513)
190 3hyw_A Sulfide-quinone reducta 97.8 4.6E-05 1.6E-09 81.3 9.2 33 78-110 3-37 (430)
191 1xdi_A RV3303C-LPDA; reductase 97.8 7.2E-05 2.5E-09 81.4 10.8 34 77-110 2-38 (499)
192 4b1b_A TRXR, thioredoxin reduc 97.8 0.00013 4.3E-09 79.9 12.7 35 77-111 42-76 (542)
193 1ges_A Glutathione reductase; 97.8 0.00012 4.2E-09 78.4 12.2 100 77-246 167-267 (450)
194 3h8l_A NADH oxidase; membrane 97.8 0.00013 4.3E-09 77.3 12.0 33 78-110 2-37 (409)
195 4g6h_A Rotenone-insensitive NA 97.8 4.5E-05 1.6E-09 82.9 8.7 37 74-110 39-75 (502)
196 2v3a_A Rubredoxin reductase; a 97.7 4.4E-05 1.5E-09 80.1 8.0 34 77-110 4-39 (384)
197 2r9z_A Glutathione amide reduc 97.7 0.00018 6.2E-09 77.4 12.5 100 77-246 166-266 (463)
198 2bcg_G Secretory pathway GDP d 97.7 2.6E-05 9E-10 83.8 5.7 35 76-110 10-44 (453)
199 2e1m_A L-glutamate oxidase; L- 97.7 3.1E-05 1.1E-09 80.5 5.7 35 75-109 42-76 (376)
200 4eqs_A Coenzyme A disulfide re 97.7 0.0001 3.5E-09 78.8 9.8 32 79-110 2-35 (437)
201 3urh_A Dihydrolipoyl dehydroge 97.7 2.9E-05 9.8E-10 84.4 5.3 37 74-110 22-58 (491)
202 3s5w_A L-ornithine 5-monooxyge 97.6 0.00044 1.5E-08 74.3 14.3 141 77-244 227-377 (463)
203 3o0h_A Glutathione reductase; 97.6 2.9E-05 1E-09 84.2 5.0 34 76-109 25-58 (484)
204 2b9w_A Putative aminooxidase; 97.6 4E-05 1.4E-09 81.5 5.7 53 191-245 207-259 (424)
205 3dk9_A Grase, GR, glutathione 97.6 3.6E-05 1.2E-09 83.4 4.7 36 74-109 17-52 (478)
206 1v59_A Dihydrolipoamide dehydr 97.6 0.00031 1E-08 76.0 11.8 100 77-246 183-289 (478)
207 1rsg_A FMS1 protein; FAD bindi 97.6 3.7E-05 1.2E-09 84.2 4.5 56 190-245 202-258 (516)
208 1ebd_A E3BD, dihydrolipoamide 97.6 0.00034 1.2E-08 75.1 12.0 99 77-245 170-271 (455)
209 2jae_A L-amino acid oxidase; o 97.6 5.9E-05 2E-09 81.9 5.9 53 191-243 240-295 (489)
210 3hdq_A UDP-galactopyranose mut 97.6 5.5E-05 1.9E-09 79.3 5.4 36 75-110 27-62 (397)
211 2yg5_A Putrescine oxidase; oxi 97.6 3.9E-05 1.3E-09 82.4 4.4 56 191-249 216-272 (453)
212 1v0j_A UDP-galactopyranose mut 97.6 5.1E-05 1.7E-09 80.1 5.1 35 76-110 6-41 (399)
213 3vrd_B FCCB subunit, flavocyto 97.5 0.00028 9.7E-09 74.3 10.5 33 78-110 3-37 (401)
214 3lad_A Dihydrolipoamide dehydr 97.5 5.3E-05 1.8E-09 81.9 4.9 35 76-110 2-36 (476)
215 3nks_A Protoporphyrinogen oxid 97.5 5.5E-05 1.9E-09 81.7 4.9 53 192-245 236-291 (477)
216 4dna_A Probable glutathione re 97.5 5.3E-05 1.8E-09 81.7 4.7 34 76-109 4-37 (463)
217 1ojt_A Surface protein; redox- 97.5 0.00034 1.2E-08 75.7 10.8 100 77-246 185-288 (482)
218 2hqm_A GR, grase, glutathione 97.5 0.00057 2E-08 73.8 12.5 100 77-246 185-287 (479)
219 1nhp_A NADH peroxidase; oxidor 97.5 0.00052 1.8E-08 73.5 12.0 35 76-110 148-182 (447)
220 1y56_A Hypothetical protein PH 97.5 7.3E-05 2.5E-09 81.2 5.3 109 76-244 107-219 (493)
221 3o0h_A Glutathione reductase; 97.5 0.00066 2.2E-08 73.5 12.5 100 77-246 191-290 (484)
222 2vvm_A Monoamine oxidase N; FA 97.4 0.00011 3.7E-09 79.9 6.0 55 191-245 256-313 (495)
223 1sez_A Protoporphyrinogen oxid 97.4 8.4E-05 2.9E-09 81.0 5.0 36 76-111 12-47 (504)
224 2vdc_G Glutamate synthase [NAD 97.4 9.8E-05 3.4E-09 79.2 5.3 36 75-110 120-155 (456)
225 2bi7_A UDP-galactopyranose mut 97.4 0.0001 3.4E-09 77.4 5.2 34 77-110 3-36 (384)
226 3ic9_A Dihydrolipoamide dehydr 97.4 6.3E-05 2.2E-09 81.7 3.8 33 77-109 8-40 (492)
227 1zk7_A HGII, reductase, mercur 97.4 0.00011 3.7E-09 79.3 5.7 34 76-109 3-36 (467)
228 2qae_A Lipoamide, dihydrolipoy 97.4 0.0011 3.6E-08 71.5 13.4 101 77-246 174-278 (468)
229 1mo9_A ORF3; nucleotide bindin 97.4 0.00013 4.3E-09 80.0 6.2 36 75-110 41-76 (523)
230 1onf_A GR, grase, glutathione 97.4 0.00085 2.9E-08 72.9 12.7 100 77-246 176-277 (500)
231 3lxd_A FAD-dependent pyridine 97.4 0.0013 4.5E-08 69.5 13.9 100 77-245 152-252 (415)
232 3fg2_P Putative rubredoxin red 97.4 0.0014 4.7E-08 69.1 13.9 100 77-245 142-242 (404)
233 3ef6_A Toluene 1,2-dioxygenase 97.4 0.00082 2.8E-08 71.0 12.1 100 77-245 143-242 (410)
234 2r9z_A Glutathione amide reduc 97.4 0.00011 3.8E-09 79.1 5.1 34 76-109 3-36 (463)
235 1q1r_A Putidaredoxin reductase 97.4 0.0012 4.2E-08 70.2 13.1 100 77-245 149-251 (431)
236 2hqm_A GR, grase, glutathione 97.4 0.0001 3.5E-09 79.8 4.7 34 76-109 10-43 (479)
237 1xdi_A RV3303C-LPDA; reductase 97.4 0.00085 2.9E-08 72.9 12.0 100 77-246 182-281 (499)
238 2eq6_A Pyruvate dehydrogenase 97.4 0.0001 3.5E-09 79.4 4.7 34 77-110 6-39 (464)
239 1i8t_A UDP-galactopyranose mut 97.4 9.3E-05 3.2E-09 77.1 4.1 33 78-110 2-34 (367)
240 1mo9_A ORF3; nucleotide bindin 97.4 0.00095 3.3E-08 72.9 12.4 99 78-246 215-318 (523)
241 2qae_A Lipoamide, dihydrolipoy 97.4 0.00012 4.1E-09 79.0 5.1 34 77-110 2-35 (468)
242 3ic9_A Dihydrolipoamide dehydr 97.4 0.0015 5.2E-08 70.7 13.8 98 77-245 174-275 (492)
243 1ges_A Glutathione reductase; 97.3 0.00011 3.7E-09 78.9 4.4 34 76-109 3-36 (450)
244 3pl8_A Pyranose 2-oxidase; sub 97.3 0.00013 4.4E-09 81.4 5.0 36 76-111 45-80 (623)
245 2iid_A L-amino-acid oxidase; f 97.3 0.00015 5E-09 78.9 5.3 52 191-243 242-297 (498)
246 4dsg_A UDP-galactopyranose mut 97.3 0.00016 5.5E-09 78.3 5.6 57 189-247 215-273 (484)
247 2a8x_A Dihydrolipoyl dehydroge 97.3 0.0012 4E-08 71.1 12.2 99 77-245 171-272 (464)
248 1onf_A GR, grase, glutathione 97.3 0.00015 5.2E-09 78.8 5.3 34 77-110 2-35 (500)
249 3iwa_A FAD-dependent pyridine 97.3 0.0012 4.2E-08 71.0 12.4 100 77-245 159-259 (472)
250 1d5t_A Guanine nucleotide diss 97.3 0.0002 6.7E-09 76.4 5.9 54 191-245 235-291 (433)
251 3p1w_A Rabgdi protein; GDI RAB 97.3 0.00016 5.3E-09 77.5 5.0 37 74-110 17-53 (475)
252 2wpf_A Trypanothione reductase 97.3 0.0011 3.6E-08 72.0 11.6 100 77-246 191-294 (495)
253 2yqu_A 2-oxoglutarate dehydrog 97.3 0.00017 5.9E-09 77.4 4.9 33 78-110 2-34 (455)
254 1fec_A Trypanothione reductase 97.3 0.0011 3.6E-08 72.0 11.1 99 77-245 187-289 (490)
255 1zmd_A Dihydrolipoyl dehydroge 97.3 0.0014 4.7E-08 70.7 11.9 101 77-246 178-284 (474)
256 3ntd_A FAD-dependent pyridine 97.2 0.0017 5.9E-08 71.6 12.9 33 78-110 152-184 (565)
257 2gqw_A Ferredoxin reductase; f 97.2 0.0023 7.9E-08 67.5 13.3 96 77-245 145-240 (408)
258 1dxl_A Dihydrolipoamide dehydr 97.2 0.00095 3.3E-08 71.9 10.5 99 77-245 177-280 (470)
259 1lvl_A Dihydrolipoamide dehydr 97.2 0.00086 2.9E-08 72.0 9.8 97 77-245 171-269 (458)
260 1lvl_A Dihydrolipoamide dehydr 97.2 0.00019 6.4E-09 77.2 4.4 34 76-109 4-37 (458)
261 4b1b_A TRXR, thioredoxin reduc 97.2 0.0023 7.8E-08 69.9 12.8 100 77-247 223-322 (542)
262 2wpf_A Trypanothione reductase 97.2 0.00021 7.3E-09 77.6 4.5 33 76-108 6-39 (495)
263 3urh_A Dihydrolipoyl dehydroge 97.1 0.0031 1.1E-07 68.3 13.3 99 77-245 198-301 (491)
264 3l8k_A Dihydrolipoyl dehydroge 97.1 0.0022 7.4E-08 69.0 11.9 98 77-246 172-274 (466)
265 1fec_A Trypanothione reductase 97.1 0.00027 9.1E-09 76.7 4.7 32 77-108 3-35 (490)
266 2cdu_A NADPH oxidase; flavoenz 97.1 0.0034 1.2E-07 67.2 13.0 101 77-246 149-249 (452)
267 1kdg_A CDH, cellobiose dehydro 97.1 0.00032 1.1E-08 77.2 5.0 35 76-110 6-40 (546)
268 3oc4_A Oxidoreductase, pyridin 97.1 0.0031 1.1E-07 67.4 12.6 98 77-244 147-244 (452)
269 1zk7_A HGII, reductase, mercur 97.1 0.0033 1.1E-07 67.6 12.8 98 77-246 176-273 (467)
270 2x8g_A Thioredoxin glutathione 97.1 0.00035 1.2E-08 77.8 4.9 34 76-109 106-139 (598)
271 3cgb_A Pyridine nucleotide-dis 97.0 0.0036 1.2E-07 67.6 12.6 35 76-110 185-219 (480)
272 1m6i_A Programmed cell death p 97.0 0.0032 1.1E-07 68.2 12.2 42 204-245 242-283 (493)
273 3lad_A Dihydrolipoamide dehydr 97.0 0.0045 1.5E-07 66.7 13.1 98 77-244 180-280 (476)
274 2z3y_A Lysine-specific histone 97.0 0.00055 1.9E-08 77.1 5.9 36 75-110 105-140 (662)
275 1lqt_A FPRA; NADP+ derivative, 97.0 0.00039 1.4E-08 74.5 4.2 36 76-111 2-44 (456)
276 2xag_A Lysine-specific histone 97.0 0.00066 2.2E-08 78.0 6.0 36 75-110 276-311 (852)
277 1b37_A Protein (polyamine oxid 97.0 0.00054 1.8E-08 73.9 5.1 55 191-245 207-271 (472)
278 1trb_A Thioredoxin reductase; 96.9 0.0053 1.8E-07 62.0 12.2 34 77-110 145-178 (320)
279 2bc0_A NADH oxidase; flavoprot 96.9 0.0051 1.7E-07 66.5 12.7 34 77-110 194-227 (490)
280 3itj_A Thioredoxin reductase 1 96.9 0.0027 9.3E-08 64.6 9.9 34 77-110 173-206 (338)
281 2q0l_A TRXR, thioredoxin reduc 96.9 0.0055 1.9E-07 61.6 12.0 34 77-110 143-176 (311)
282 3t37_A Probable dehydrogenase; 96.9 0.00045 1.6E-08 75.6 3.9 35 76-110 16-51 (526)
283 4dna_A Probable glutathione re 96.9 0.0048 1.6E-07 66.2 11.8 98 77-245 170-269 (463)
284 1xhc_A NADH oxidase /nitrite r 96.8 0.003 1E-07 65.6 9.3 33 78-110 144-176 (367)
285 3ics_A Coenzyme A-disulfide re 96.8 0.0058 2E-07 67.7 11.9 97 77-245 187-283 (588)
286 1cjc_A Protein (adrenodoxin re 96.8 0.00084 2.9E-08 72.0 4.9 35 77-111 6-42 (460)
287 3d1c_A Flavin-containing putat 96.8 0.0074 2.5E-07 62.3 12.0 107 77-245 166-273 (369)
288 1gte_A Dihydropyrimidine dehyd 96.8 0.00087 3E-08 79.2 5.3 35 76-110 186-221 (1025)
289 3dk9_A Grase, GR, glutathione 96.8 0.0085 2.9E-07 64.5 12.7 98 77-244 187-293 (478)
290 3kd9_A Coenzyme A disulfide re 96.7 0.0067 2.3E-07 64.7 11.6 96 78-244 149-244 (449)
291 2gag_A Heterotetrameric sarcos 96.7 0.00085 2.9E-08 78.8 4.7 35 76-110 127-161 (965)
292 1ju2_A HydroxynitrIle lyase; f 96.7 0.00055 1.9E-08 75.0 2.8 35 76-111 25-59 (536)
293 4eqs_A Coenzyme A disulfide re 96.7 0.0085 2.9E-07 63.7 11.5 33 78-110 148-180 (437)
294 3q9t_A Choline dehydrogenase a 96.7 0.001 3.5E-08 73.3 4.4 36 76-111 5-41 (577)
295 1coy_A Cholesterol oxidase; ox 96.5 0.0019 6.4E-08 70.3 5.5 36 75-110 9-44 (507)
296 1n4w_A CHOD, cholesterol oxida 96.5 0.0016 5.6E-08 70.7 4.9 35 76-110 4-38 (504)
297 3dgh_A TRXR-1, thioredoxin red 96.5 0.016 5.5E-07 62.4 12.4 97 77-244 187-289 (483)
298 3qvp_A Glucose oxidase; oxidor 96.5 0.0015 5E-08 72.0 4.2 35 76-110 18-53 (583)
299 2q7v_A Thioredoxin reductase; 96.4 0.014 5E-07 59.0 11.2 34 77-110 152-185 (325)
300 3r9u_A Thioredoxin reductase; 96.4 0.018 6.3E-07 57.6 11.7 34 77-110 147-180 (315)
301 2zbw_A Thioredoxin reductase; 96.4 0.012 4.1E-07 59.8 10.3 34 77-110 152-185 (335)
302 1fl2_A Alkyl hydroperoxide red 96.4 0.012 4E-07 59.1 9.9 34 77-110 144-177 (310)
303 3gwf_A Cyclohexanone monooxyge 96.3 0.023 8E-07 62.0 12.8 35 77-111 178-212 (540)
304 1gpe_A Protein (glucose oxidas 96.3 0.0026 9.1E-08 70.3 4.9 36 75-110 22-58 (587)
305 3f8d_A Thioredoxin reductase ( 96.3 0.014 4.9E-07 58.6 10.1 34 77-110 154-187 (323)
306 3ab1_A Ferredoxin--NADP reduct 96.3 0.011 3.7E-07 60.9 9.1 34 77-110 163-196 (360)
307 1vdc_A NTR, NADPH dependent th 96.3 0.017 5.9E-07 58.6 10.5 34 77-110 159-192 (333)
308 3fim_B ARYL-alcohol oxidase; A 96.2 0.0015 5.3E-08 71.7 2.5 34 77-110 2-36 (566)
309 3dgz_A Thioredoxin reductase 2 96.2 0.028 9.4E-07 60.7 12.0 33 77-109 185-217 (488)
310 2jbv_A Choline oxidase; alcoho 96.1 0.0032 1.1E-07 69.1 4.2 35 76-110 12-47 (546)
311 2a87_A TRXR, TR, thioredoxin r 96.0 0.02 6.8E-07 58.3 9.6 34 77-110 155-188 (335)
312 3cty_A Thioredoxin reductase; 96.0 0.046 1.6E-06 55.0 11.9 34 77-110 155-188 (319)
313 3fwz_A Inner membrane protein 95.8 0.01 3.5E-07 52.1 5.7 35 77-111 7-41 (140)
314 4g6h_A Rotenone-insensitive NA 95.8 0.025 8.6E-07 61.2 9.8 40 204-243 288-331 (502)
315 3uox_A Otemo; baeyer-villiger 95.8 0.023 7.7E-07 62.2 9.1 36 76-111 184-219 (545)
316 2g1u_A Hypothetical protein TM 95.7 0.012 4E-07 52.7 5.6 35 77-111 19-53 (155)
317 1vg0_A RAB proteins geranylger 95.7 0.0095 3.3E-07 65.8 5.6 35 76-110 7-41 (650)
318 2gv8_A Monooxygenase; FMO, FAD 95.6 0.024 8.3E-07 60.3 8.5 33 77-109 212-245 (447)
319 3lzw_A Ferredoxin--NADP reduct 95.5 0.044 1.5E-06 55.3 9.5 34 77-110 154-187 (332)
320 2x8g_A Thioredoxin glutathione 95.4 0.11 3.9E-06 57.4 13.2 32 78-109 287-318 (598)
321 3qfa_A Thioredoxin reductase 1 95.4 0.11 3.7E-06 56.4 12.7 32 78-109 211-242 (519)
322 4ap3_A Steroid monooxygenase; 95.3 0.032 1.1E-06 61.0 8.2 35 77-111 191-225 (549)
323 3llv_A Exopolyphosphatase-rela 95.3 0.017 5.9E-07 50.6 4.9 33 78-110 7-39 (141)
324 1lss_A TRK system potassium up 95.2 0.021 7E-07 49.7 5.2 33 78-110 5-37 (140)
325 1id1_A Putative potassium chan 95.2 0.023 7.8E-07 50.6 5.5 34 77-110 3-36 (153)
326 3fbs_A Oxidoreductase; structu 95.1 0.06 2.1E-06 53.3 9.1 32 77-109 141-172 (297)
327 3ic5_A Putative saccharopine d 94.8 0.028 9.7E-07 47.1 4.7 33 78-110 6-39 (118)
328 1hyu_A AHPF, alkyl hydroperoxi 94.8 0.078 2.7E-06 57.6 9.4 34 77-110 355-388 (521)
329 4b63_A L-ornithine N5 monooxyg 94.7 0.41 1.4E-05 51.6 15.0 34 77-110 246-281 (501)
330 4a9w_A Monooxygenase; baeyer-v 94.5 0.028 9.7E-07 57.3 5.0 33 77-110 163-195 (357)
331 1f0y_A HCDH, L-3-hydroxyacyl-C 94.2 0.048 1.6E-06 54.7 5.6 33 78-110 16-48 (302)
332 3c85_A Putative glutathione-re 94.1 0.043 1.5E-06 50.4 4.8 34 77-110 39-73 (183)
333 3k30_A Histamine dehydrogenase 94.1 0.067 2.3E-06 60.3 7.3 34 77-110 523-558 (690)
334 4gcm_A TRXR, thioredoxin reduc 94.1 0.038 1.3E-06 55.5 4.6 33 78-110 146-178 (312)
335 2hmt_A YUAA protein; RCK, KTN, 94.0 0.047 1.6E-06 47.5 4.7 33 78-110 7-39 (144)
336 3klj_A NAD(FAD)-dependent dehy 93.7 0.047 1.6E-06 56.9 4.6 35 77-111 146-180 (385)
337 1lqt_A FPRA; NADP+ derivative, 93.7 0.3 1E-05 51.9 11.0 34 77-110 147-201 (456)
338 3ado_A Lambda-crystallin; L-gu 93.5 0.059 2E-06 54.2 4.7 34 77-110 6-39 (319)
339 4a5l_A Thioredoxin reductase; 93.4 0.059 2E-06 53.9 4.7 34 77-110 152-185 (314)
340 3l4b_C TRKA K+ channel protien 93.4 0.056 1.9E-06 51.2 4.2 33 79-111 2-34 (218)
341 4e12_A Diketoreductase; oxidor 93.4 0.083 2.9E-06 52.3 5.6 33 78-110 5-37 (283)
342 2dpo_A L-gulonate 3-dehydrogen 93.1 0.072 2.5E-06 53.7 4.7 34 77-110 6-39 (319)
343 1pzg_A LDH, lactate dehydrogen 93.0 0.099 3.4E-06 53.1 5.6 34 77-110 9-43 (331)
344 3i83_A 2-dehydropantoate 2-red 92.8 0.098 3.3E-06 52.9 5.2 32 78-109 3-34 (320)
345 3vtf_A UDP-glucose 6-dehydroge 92.7 0.12 3.9E-06 54.4 5.6 35 77-111 21-55 (444)
346 1gte_A Dihydropyrimidine dehyd 92.6 0.76 2.6E-05 54.1 13.1 33 78-110 333-366 (1025)
347 3ghy_A Ketopantoate reductase 92.3 0.12 4E-06 52.6 5.1 32 78-109 4-35 (335)
348 2gag_A Heterotetrameric sarcos 92.3 0.32 1.1E-05 56.9 9.4 33 78-110 285-317 (965)
349 1ps9_A 2,4-dienoyl-COA reducta 92.2 0.59 2E-05 52.4 11.1 29 77-105 494-522 (671)
350 2raf_A Putative dinucleotide-b 92.2 0.15 5.1E-06 47.9 5.3 35 77-111 19-53 (209)
351 3lk7_A UDP-N-acetylmuramoylala 92.0 0.14 4.6E-06 54.5 5.4 34 77-110 9-42 (451)
352 3k96_A Glycerol-3-phosphate de 92.0 0.13 4.6E-06 52.6 5.1 35 76-110 28-62 (356)
353 3tl2_A Malate dehydrogenase; c 92.0 0.17 5.7E-06 50.9 5.6 35 75-109 6-41 (315)
354 1ks9_A KPA reductase;, 2-dehyd 92.0 0.15 5.1E-06 50.4 5.3 32 79-110 2-33 (291)
355 1kyq_A Met8P, siroheme biosynt 92.0 0.099 3.4E-06 51.3 3.8 34 76-109 12-45 (274)
356 3doj_A AT3G25530, dehydrogenas 91.9 0.17 5.7E-06 50.9 5.7 34 78-111 22-55 (310)
357 2y0c_A BCEC, UDP-glucose dehyd 91.9 0.14 4.7E-06 54.8 5.2 34 77-110 8-41 (478)
358 2ewd_A Lactate dehydrogenase,; 91.9 0.15 5E-06 51.5 5.2 34 77-110 4-38 (317)
359 3hn2_A 2-dehydropantoate 2-red 91.8 0.12 4E-06 52.1 4.3 32 78-109 3-34 (312)
360 1bg6_A N-(1-D-carboxylethyl)-L 91.8 0.15 5.1E-06 52.2 5.2 34 77-110 4-37 (359)
361 3dfz_A SIRC, precorrin-2 dehyd 91.7 0.14 4.9E-06 48.5 4.5 35 75-109 29-63 (223)
362 2x5o_A UDP-N-acetylmuramoylala 91.7 0.11 3.7E-06 55.1 4.0 33 78-110 6-38 (439)
363 2ew2_A 2-dehydropantoate 2-red 91.7 0.16 5.4E-06 50.9 5.1 33 78-110 4-36 (316)
364 1lld_A L-lactate dehydrogenase 91.6 0.17 5.7E-06 51.0 5.2 33 78-110 8-42 (319)
365 3e8x_A Putative NAD-dependent 91.6 0.2 6.7E-06 47.8 5.5 36 75-110 19-55 (236)
366 3gg2_A Sugar dehydrogenase, UD 91.6 0.16 5.5E-06 53.9 5.2 34 78-111 3-36 (450)
367 3gvi_A Malate dehydrogenase; N 91.6 0.19 6.5E-06 50.7 5.5 36 75-110 5-41 (324)
368 4g65_A TRK system potassium up 91.4 0.074 2.5E-06 56.7 2.4 35 77-111 3-37 (461)
369 1t2d_A LDH-P, L-lactate dehydr 91.3 0.21 7.2E-06 50.4 5.6 33 78-110 5-38 (322)
370 2hjr_A Malate dehydrogenase; m 91.2 0.21 7.1E-06 50.6 5.5 33 78-110 15-48 (328)
371 4dio_A NAD(P) transhydrogenase 91.1 0.21 7.3E-06 51.6 5.4 34 77-110 190-223 (405)
372 3k6j_A Protein F01G10.3, confi 91.1 0.26 8.9E-06 52.1 6.2 34 77-110 54-87 (460)
373 2uyy_A N-PAC protein; long-cha 90.9 0.27 9.1E-06 49.4 5.9 34 77-110 30-63 (316)
374 3ggo_A Prephenate dehydrogenas 90.9 0.26 8.9E-06 49.5 5.7 34 77-110 33-68 (314)
375 2v6b_A L-LDH, L-lactate dehydr 90.8 0.22 7.6E-06 49.8 5.1 31 79-109 2-34 (304)
376 3g17_A Similar to 2-dehydropan 90.8 0.15 5.1E-06 50.8 3.8 33 78-110 3-35 (294)
377 3g79_A NDP-N-acetyl-D-galactos 90.8 0.2 6.9E-06 53.3 5.0 34 78-111 19-54 (478)
378 4a7p_A UDP-glucose dehydrogena 90.7 0.23 8E-06 52.4 5.4 35 77-111 8-42 (446)
379 3l9w_A Glutathione-regulated p 90.5 0.21 7.3E-06 52.2 4.9 35 77-111 4-38 (413)
380 3g0o_A 3-hydroxyisobutyrate de 90.5 0.22 7.6E-06 49.7 4.9 34 77-110 7-40 (303)
381 3dtt_A NADP oxidoreductase; st 90.4 0.28 9.4E-06 47.4 5.3 36 76-111 18-53 (245)
382 4e21_A 6-phosphogluconate dehy 90.4 0.25 8.6E-06 50.6 5.2 36 75-110 20-55 (358)
383 3pef_A 6-phosphogluconate dehy 90.4 0.27 9.1E-06 48.7 5.3 34 78-111 2-35 (287)
384 3oj0_A Glutr, glutamyl-tRNA re 90.3 0.11 3.8E-06 45.5 2.2 34 77-110 21-54 (144)
385 3p2y_A Alanine dehydrogenase/p 90.3 0.24 8.1E-06 50.9 4.8 34 77-110 184-217 (381)
386 1jw9_B Molybdopterin biosynthe 90.3 0.23 7.7E-06 48.1 4.5 34 77-110 31-65 (249)
387 1z82_A Glycerol-3-phosphate de 90.3 0.26 9E-06 50.0 5.2 34 76-109 13-46 (335)
388 1zcj_A Peroxisomal bifunctiona 90.2 0.26 9E-06 52.4 5.4 33 78-110 38-70 (463)
389 1zej_A HBD-9, 3-hydroxyacyl-CO 90.1 0.24 8.4E-06 49.1 4.7 34 76-110 11-44 (293)
390 3qha_A Putative oxidoreductase 90.1 0.18 6.3E-06 50.2 3.8 34 77-110 15-48 (296)
391 3eag_A UDP-N-acetylmuramate:L- 90.0 0.27 9.3E-06 49.7 5.1 33 78-110 5-38 (326)
392 3ego_A Probable 2-dehydropanto 90.0 0.27 9.3E-06 49.2 5.0 32 78-110 3-34 (307)
393 2vns_A Metalloreductase steap3 89.9 0.32 1.1E-05 45.9 5.1 33 78-110 29-61 (215)
394 4huj_A Uncharacterized protein 89.9 0.19 6.6E-06 47.6 3.6 33 78-110 24-57 (220)
395 3pid_A UDP-glucose 6-dehydroge 89.8 0.23 8E-06 52.0 4.5 33 78-111 37-69 (432)
396 3p7m_A Malate dehydrogenase; p 89.8 0.35 1.2E-05 48.7 5.6 34 77-110 5-39 (321)
397 3pqe_A L-LDH, L-lactate dehydr 89.7 0.3 1E-05 49.3 5.0 33 77-109 5-39 (326)
398 3hwr_A 2-dehydropantoate 2-red 89.7 0.3 1E-05 49.2 5.1 32 77-109 19-50 (318)
399 1mv8_A GMD, GDP-mannose 6-dehy 89.7 0.24 8.1E-06 52.4 4.5 32 79-110 2-33 (436)
400 3qsg_A NAD-binding phosphogluc 89.6 0.26 8.9E-06 49.5 4.5 33 77-109 24-57 (312)
401 1guz_A Malate dehydrogenase; o 89.4 0.35 1.2E-05 48.5 5.3 32 79-110 2-35 (310)
402 1y6j_A L-lactate dehydrogenase 89.3 0.36 1.2E-05 48.6 5.2 34 77-110 7-42 (318)
403 3mog_A Probable 3-hydroxybutyr 89.3 0.33 1.1E-05 51.9 5.3 34 77-110 5-38 (483)
404 4dll_A 2-hydroxy-3-oxopropiona 89.3 0.31 1.1E-05 49.1 4.8 34 77-110 31-64 (320)
405 3gpi_A NAD-dependent epimerase 89.2 0.4 1.4E-05 47.2 5.5 34 78-111 4-37 (286)
406 3dfu_A Uncharacterized protein 89.1 0.12 4.2E-06 49.2 1.6 32 77-108 6-37 (232)
407 2xve_A Flavin-containing monoo 89.1 0.3 1E-05 52.0 4.8 34 77-110 197-230 (464)
408 1x13_A NAD(P) transhydrogenase 89.0 0.39 1.3E-05 50.0 5.4 34 77-110 172-205 (401)
409 1ur5_A Malate dehydrogenase; o 88.9 0.41 1.4E-05 47.9 5.4 33 78-110 3-36 (309)
410 3l6d_A Putative oxidoreductase 88.9 0.46 1.6E-05 47.5 5.8 34 77-110 9-42 (306)
411 2qyt_A 2-dehydropantoate 2-red 88.7 0.26 8.8E-06 49.4 3.7 31 78-108 9-45 (317)
412 1txg_A Glycerol-3-phosphate de 88.7 0.32 1.1E-05 49.2 4.4 30 79-108 2-31 (335)
413 3pdu_A 3-hydroxyisobutyrate de 88.4 0.3 1E-05 48.3 3.9 33 79-111 3-35 (287)
414 1l7d_A Nicotinamide nucleotide 88.4 0.46 1.6E-05 49.2 5.5 34 77-110 172-205 (384)
415 4ezb_A Uncharacterized conserv 88.4 0.43 1.5E-05 48.0 5.1 33 78-110 25-58 (317)
416 1pjc_A Protein (L-alanine dehy 88.3 0.42 1.5E-05 49.0 5.1 33 78-110 168-200 (361)
417 3d0o_A L-LDH 1, L-lactate dehy 88.2 0.42 1.4E-05 48.1 4.8 34 76-109 5-40 (317)
418 1ldn_A L-lactate dehydrogenase 88.1 0.49 1.7E-05 47.6 5.3 33 77-109 6-40 (316)
419 3ius_A Uncharacterized conserv 88.0 0.41 1.4E-05 47.0 4.6 33 78-110 6-38 (286)
420 1hdo_A Biliverdin IX beta redu 88.0 0.63 2.2E-05 42.8 5.7 34 78-111 4-38 (206)
421 2zyd_A 6-phosphogluconate dehy 88.0 0.39 1.3E-05 51.3 4.7 36 75-110 13-48 (480)
422 1oju_A MDH, malate dehydrogena 88.0 0.4 1.4E-05 47.5 4.5 32 79-110 2-35 (294)
423 1jay_A Coenzyme F420H2:NADP+ o 87.9 0.49 1.7E-05 44.2 4.9 32 79-110 2-34 (212)
424 1evy_A Glycerol-3-phosphate de 87.8 0.3 1E-05 50.2 3.6 32 79-110 17-48 (366)
425 4gwg_A 6-phosphogluconate dehy 87.7 0.49 1.7E-05 50.4 5.3 35 77-111 4-38 (484)
426 2rcy_A Pyrroline carboxylate r 87.7 0.44 1.5E-05 46.2 4.6 34 78-111 5-42 (262)
427 1a5z_A L-lactate dehydrogenase 87.7 0.42 1.4E-05 48.1 4.5 32 79-110 2-35 (319)
428 2eez_A Alanine dehydrogenase; 87.7 0.54 1.8E-05 48.4 5.4 34 77-110 166-199 (369)
429 2f1k_A Prephenate dehydrogenas 87.7 0.52 1.8E-05 46.3 5.1 32 79-110 2-33 (279)
430 1dlj_A UDP-glucose dehydrogena 87.5 0.37 1.3E-05 50.3 4.1 31 79-110 2-32 (402)
431 2h78_A Hibadh, 3-hydroxyisobut 87.5 0.43 1.5E-05 47.5 4.5 33 78-110 4-36 (302)
432 3h8l_A NADH oxidase; membrane 87.5 1.9 6.5E-05 44.7 9.7 37 204-244 234-270 (409)
433 3cky_A 2-hydroxymethyl glutara 87.5 0.45 1.5E-05 47.3 4.6 34 77-110 4-37 (301)
434 1vpd_A Tartronate semialdehyde 87.4 0.44 1.5E-05 47.3 4.5 33 78-110 6-38 (299)
435 3ew7_A LMO0794 protein; Q8Y8U8 87.4 0.62 2.1E-05 43.5 5.3 32 79-110 2-34 (221)
436 3ldh_A Lactate dehydrogenase; 87.4 0.72 2.5E-05 46.4 6.0 33 77-109 21-55 (330)
437 2a9f_A Putative malic enzyme ( 87.4 0.5 1.7E-05 48.4 4.8 35 75-109 186-221 (398)
438 3tri_A Pyrroline-5-carboxylate 87.4 0.6 2.1E-05 46.0 5.4 34 77-110 3-39 (280)
439 2aef_A Calcium-gated potassium 87.4 0.24 8.3E-06 47.3 2.4 34 77-111 9-42 (234)
440 2i6t_A Ubiquitin-conjugating e 87.3 0.49 1.7E-05 47.2 4.6 33 78-110 15-49 (303)
441 1nyt_A Shikimate 5-dehydrogena 87.2 0.62 2.1E-05 45.6 5.3 33 77-109 119-151 (271)
442 4b4o_A Epimerase family protei 87.1 0.63 2.1E-05 46.0 5.4 33 78-110 1-34 (298)
443 2q3e_A UDP-glucose 6-dehydroge 87.1 0.42 1.4E-05 51.0 4.3 34 78-111 6-41 (467)
444 4id9_A Short-chain dehydrogena 87.0 0.57 2E-05 47.4 5.2 37 75-111 17-54 (347)
445 2izz_A Pyrroline-5-carboxylate 87.0 0.54 1.9E-05 47.3 4.9 34 77-110 22-59 (322)
446 2o3j_A UDP-glucose 6-dehydroge 86.9 0.47 1.6E-05 50.7 4.6 34 78-111 10-45 (481)
447 1x0v_A GPD-C, GPDH-C, glycerol 86.9 0.34 1.2E-05 49.5 3.4 33 78-110 9-48 (354)
448 2pv7_A T-protein [includes: ch 86.9 0.55 1.9E-05 46.7 4.8 33 78-110 22-55 (298)
449 3nep_X Malate dehydrogenase; h 86.7 0.54 1.9E-05 47.1 4.6 32 79-110 2-35 (314)
450 3h2s_A Putative NADH-flavin re 86.7 0.68 2.3E-05 43.4 5.2 32 79-110 2-34 (224)
451 2vhw_A Alanine dehydrogenase; 86.7 0.66 2.3E-05 47.9 5.4 34 77-110 168-201 (377)
452 2vdc_G Glutamate synthase [NAD 86.7 0.67 2.3E-05 49.2 5.6 35 76-110 263-298 (456)
453 3h8v_A Ubiquitin-like modifier 86.7 0.55 1.9E-05 46.4 4.6 35 76-110 35-70 (292)
454 3ktd_A Prephenate dehydrogenas 86.7 0.68 2.3E-05 46.9 5.4 33 78-110 9-41 (341)
455 1yqg_A Pyrroline-5-carboxylate 86.7 0.54 1.9E-05 45.6 4.6 32 79-110 2-34 (263)
456 3vku_A L-LDH, L-lactate dehydr 86.6 0.59 2E-05 47.0 4.9 33 77-109 9-43 (326)
457 2p4q_A 6-phosphogluconate dehy 86.6 0.63 2.2E-05 49.9 5.4 35 77-111 10-44 (497)
458 1hyh_A L-hicdh, L-2-hydroxyiso 86.3 0.55 1.9E-05 47.0 4.5 33 78-110 2-36 (309)
459 3c24_A Putative oxidoreductase 86.3 0.81 2.8E-05 45.1 5.7 33 78-110 12-45 (286)
460 2g5c_A Prephenate dehydrogenas 86.2 0.7 2.4E-05 45.4 5.1 32 79-110 3-36 (281)
461 3phh_A Shikimate dehydrogenase 86.2 0.8 2.7E-05 44.7 5.4 34 77-110 118-151 (269)
462 4ffl_A PYLC; amino acid, biosy 86.2 0.73 2.5E-05 47.2 5.4 34 78-111 2-35 (363)
463 4aj2_A L-lactate dehydrogenase 86.1 0.8 2.7E-05 46.2 5.5 34 76-109 18-53 (331)
464 1cjc_A Protein (adrenodoxin re 86.0 0.68 2.3E-05 49.2 5.3 34 77-110 145-199 (460)
465 2gf2_A Hibadh, 3-hydroxyisobut 85.9 0.6 2E-05 46.2 4.5 32 79-110 2-33 (296)
466 1vl6_A Malate oxidoreductase; 85.9 0.67 2.3E-05 47.4 4.8 34 76-109 191-225 (388)
467 3rui_A Ubiquitin-like modifier 85.9 0.79 2.7E-05 46.2 5.3 35 77-111 34-69 (340)
468 1ez4_A Lactate dehydrogenase; 85.9 0.71 2.4E-05 46.4 5.0 34 76-109 4-39 (318)
469 2egg_A AROE, shikimate 5-dehyd 85.7 0.74 2.5E-05 45.8 5.0 33 77-109 141-174 (297)
470 2pgd_A 6-phosphogluconate dehy 85.7 0.7 2.4E-05 49.4 5.2 33 78-110 3-35 (482)
471 1pjq_A CYSG, siroheme synthase 85.6 0.71 2.4E-05 49.0 5.1 33 77-109 12-44 (457)
472 3ojo_A CAP5O; rossmann fold, c 85.6 0.53 1.8E-05 49.4 4.0 34 78-111 12-45 (431)
473 3ond_A Adenosylhomocysteinase; 85.4 0.78 2.7E-05 48.5 5.2 35 76-110 264-298 (488)
474 3dhn_A NAD-dependent epimerase 85.3 0.72 2.5E-05 43.4 4.6 35 78-112 5-40 (227)
475 1zud_1 Adenylyltransferase THI 85.2 0.73 2.5E-05 44.5 4.6 34 77-110 28-62 (251)
476 2wtb_A MFP2, fatty acid multif 85.2 0.75 2.6E-05 51.8 5.3 33 78-110 313-345 (725)
477 3gt0_A Pyrroline-5-carboxylate 85.1 0.88 3E-05 43.7 5.2 33 78-110 3-39 (247)
478 2iz1_A 6-phosphogluconate dehy 85.0 0.81 2.8E-05 48.8 5.3 34 77-110 5-38 (474)
479 3fi9_A Malate dehydrogenase; s 85.0 0.93 3.2E-05 45.9 5.4 33 77-109 8-43 (343)
480 1yj8_A Glycerol-3-phosphate de 84.8 0.57 1.9E-05 48.3 3.8 33 78-110 22-61 (375)
481 4gbj_A 6-phosphogluconate dehy 84.6 0.63 2.2E-05 46.2 3.9 34 78-111 6-39 (297)
482 3d4o_A Dipicolinate synthase s 84.6 1 3.4E-05 44.7 5.4 35 76-110 154-188 (293)
483 2pzm_A Putative nucleotide sug 84.6 1 3.4E-05 45.3 5.5 35 76-110 19-54 (330)
484 1pgj_A 6PGDH, 6-PGDH, 6-phosph 84.6 0.8 2.7E-05 48.9 5.0 32 79-110 3-34 (478)
485 1np3_A Ketol-acid reductoisome 84.5 0.95 3.3E-05 45.9 5.3 33 78-110 17-49 (338)
486 1p77_A Shikimate 5-dehydrogena 84.5 0.75 2.6E-05 45.1 4.4 33 77-109 119-151 (272)
487 2cvz_A Dehydrogenase, 3-hydrox 84.3 0.67 2.3E-05 45.6 4.0 31 79-110 3-33 (289)
488 2rir_A Dipicolinate synthase, 84.3 1.1 3.6E-05 44.7 5.4 35 76-110 156-190 (300)
489 2hk9_A Shikimate dehydrogenase 84.3 0.83 2.8E-05 44.8 4.6 34 77-110 129-162 (275)
490 3o38_A Short chain dehydrogena 84.2 1.3 4.3E-05 43.0 5.9 36 75-110 20-57 (266)
491 3d1l_A Putative NADP oxidoredu 84.1 0.83 2.8E-05 44.4 4.5 33 78-110 11-44 (266)
492 3c7a_A Octopine dehydrogenase; 84.0 0.59 2E-05 48.7 3.6 30 78-107 3-33 (404)
493 1i36_A Conserved hypothetical 83.8 0.85 2.9E-05 44.2 4.4 30 79-108 2-31 (264)
494 2we8_A Xanthine dehydrogenase; 83.8 1.1 3.6E-05 46.3 5.3 35 77-111 204-238 (386)
495 3don_A Shikimate dehydrogenase 83.8 0.82 2.8E-05 44.8 4.3 35 77-111 117-152 (277)
496 1wdk_A Fatty oxidation complex 83.8 0.87 3E-05 51.2 5.0 33 78-110 315-347 (715)
497 3gvp_A Adenosylhomocysteinase 83.6 1 3.4E-05 46.8 5.0 35 76-110 219-253 (435)
498 3h5n_A MCCB protein; ubiquitin 83.5 0.94 3.2E-05 46.2 4.7 34 77-110 118-152 (353)
499 1b37_A Protein (polyamine oxid 83.5 1.8 6E-05 46.0 7.2 35 76-110 3-38 (472)
500 3ce6_A Adenosylhomocysteinase; 83.4 1.1 3.6E-05 47.9 5.2 34 77-110 274-307 (494)
No 1
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=100.00 E-value=1.7e-42 Score=372.13 Aligned_cols=369 Identities=27% Similarity=0.375 Sum_probs=274.5
Q ss_pred CCCCcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccc
Q 006440 73 SENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTG 152 (645)
Q Consensus 73 ~~~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~ 152 (645)
....++||+||||||+|+++|+.|+++|++|+|+|+.+.... . ..++.+.++++++|+++ |+++++...+....
T Consensus 19 ~~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~-~---~~~~~l~~~~~~~l~~l--g~~~~~~~~~~~~~ 92 (407)
T 3rp8_A 19 YFQGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKP-V---GAAISVWPNGVKCMAHL--GMGDIMETFGGPLR 92 (407)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC--------CEEEECHHHHHHHHHT--TCHHHHHHHSCCCC
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCC-c---CeeEEECHHHHHHHHHC--CCHHHHHhhcCCCc
Confidence 344578999999999999999999999999999999864322 2 23688999999999999 78888877654321
Q ss_pred cccccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeCCeEEEEEcCCcEEe
Q 006440 153 DRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYA 232 (645)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ 232 (645)
.+. +.+...+.....++........+ +..+.++|..|++.|.+.+....++++++|++++.++++++|++.+|++++
T Consensus 93 -~~~-~~~~~~g~~~~~~~~~~~~~~~~-~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ 169 (407)
T 3rp8_A 93 -RMA-YRDFRSGENMTQFSLAPLIERTG-SRPCPVSRAELQREMLDYWGRDSVQFGKRVTRCEEDADGVTVWFTDGSSAS 169 (407)
T ss_dssp -EEE-EEETTTCCEEEEEECHHHHHHHS-SCCEEEEHHHHHHHHHHHHCGGGEEESCCEEEEEEETTEEEEEETTSCEEE
T ss_pred -ceE-EEECCCCCEeEEecchhhhhhcC-CceEEEEHHHHHHHHHHhCCcCEEEECCEEEEEEecCCcEEEEEcCCCEEe
Confidence 221 23322233333333211111111 235789999999999998865558899999999999999999999999999
Q ss_pred ccEEEEccCCchhhhhhhcCC-CCCcccCeEEEEEEeccCCCCccccceEEEecCceEEEEeecCCCeEEEEEEEeCCCC
Q 006440 233 GDLLIGADGIWSKVRKNLFGP-QEAIYSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAG 311 (645)
Q Consensus 233 a~lvVgADG~~S~vR~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (645)
||+||+|||.+|.||+.+.+. ....|.++.++.++............+..+.+++.+++.+|..++...|++....+..
T Consensus 170 a~~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 249 (407)
T 3rp8_A 170 GDLLIAADGSHSALRPWVLGFTPQRRYAGYVNWNGLVEIDEALAPGDQWTTFVGEGKQVSLMPVSAGRFYFFFDVPLPAG 249 (407)
T ss_dssp ESEEEECCCTTCSSHHHHHSSCCCCEEEEEEEEEEEEECCTTTCCTTEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT
T ss_pred eCEEEECCCcChHHHHHhcCCCCCCcccCcEEEEEEEecccccCCCCceEEEECCCcEEEEEEcCCCeEEEEEEeCCCcC
Confidence 999999999999999999443 3556666666766654322222334566677888888889999998888877665443
Q ss_pred CCCCCcchHHHHHHHHcCCChhHHHHHHcCCccceeecccccCCCCCcccCCcEEEEccccCcCCCCCcchhhHHHHHHH
Q 006440 312 GVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGY 391 (645)
Q Consensus 312 ~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rvvLvGDAAH~~~P~~GqG~n~al~Da~ 391 (645)
.........+.+.+.+..|.+.+.+.+..........+.++...+..+|..+|++|||||||.++|++|||+|+||+||.
T Consensus 250 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~~~al~da~ 329 (407)
T 3rp8_A 250 LAEDRDTLRADLSRYFAGWAPPVQKLIAALDPQTTNRIEIHDIEPFSRLVRGRVALLGDAGHSTTPDIGQGGCAAMEDAV 329 (407)
T ss_dssp CSCCTTTHHHHHHHHTTTCCHHHHHHHHHSCGGGCEEEEEEECCCCSCCEETTEEECGGGTCCCCGGGSCHHHHHHHHHH
T ss_pred CCCCchhHHHHHHHHhcCCChHHHHHHHcCCccceeEEeeEecCCCCceecCCEEEEEcccccCCcchhhhHHHHHHHHH
Confidence 33334566788889999999988888877766554445555555557899999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCCChhhHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhHhhhhhccCCCccchhhhcccCCC
Q 006440 392 QLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAAVMASTYKAYLGVGLGPLSFLTKFRIPHP 467 (645)
Q Consensus 392 ~La~~L~~~~~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~~~ 467 (645)
.|+++|... . +...+|+.|+++|++++..++..++.+..+ +....+++..+|+..|...
T Consensus 330 ~La~~L~~~---------~-~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~-------~~~~~~~~~~~R~~~l~~~ 388 (407)
T 3rp8_A 330 VLGAVFRQT---------R-DIAAALREYEAQRCDRVRDLVLKARKRCDI-------THGKDMQLTEAWYQELREE 388 (407)
T ss_dssp HHHHHHHSC---------C-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HTTTTHHHHHHHHHHHHSC
T ss_pred HHHHHHhcC---------C-CHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-------hhcCCHHHHHHHHHHHhhc
Confidence 999999842 1 568999999999999999988887654433 3334455677888776544
No 2
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=100.00 E-value=6.7e-41 Score=359.73 Aligned_cols=348 Identities=23% Similarity=0.320 Sum_probs=230.4
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHH---hccccccc
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMR---AGCVTGDR 154 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~---~~~~~~~~ 154 (645)
++|+||||||+||++|+.|+++|++|+|+||++.+.... .+.++.++++++++|+++ |+.+.+.. ........
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~--~G~~i~l~~~~~~~L~~l--g~~~~~~~~~~~~~~~~~~ 77 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSIL--PGYGIHINSFGKQALQEC--LPAENWLAFEEASRYIGGQ 77 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSC--CCCEEEECHHHHHHHHHH--SCHHHHHHHHHHCEEECCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCC--CceEEeeCHHHHHHHHHc--CChHHHHHhhhhhcccCcc
Confidence 579999999999999999999999999999976543221 122688999999999999 44444432 21111111
Q ss_pred cccccccCCCceeeeccCCCchh-hcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeCC-eEEEEEcCCcEEe
Q 006440 155 INGLVDGISGSWYIKFDTFTPAA-EKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGD-KVSVVLENGQCYA 232 (645)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~-~v~v~~~~g~~i~ 232 (645)
.. +.+. ............+.. .......+.|+|..|+++|.+.++.. ++++++|+++++.++ .++|+++||++++
T Consensus 78 ~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~-v~~~~~v~~~~~~~~~~v~v~~~dG~~~~ 154 (412)
T 4hb9_A 78 SR-FYNE-RMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGLANT-IQWNKTFVRYEHIENGGIKIFFADGSHEN 154 (412)
T ss_dssp CE-EECT-TSCEEEC--------------CEEEEEHHHHHHHHHTTCTTT-EECSCCEEEEEECTTSCEEEEETTSCEEE
T ss_pred ee-EecC-CcceecccCCccccccccccccceEeeHHHHHHHHHhhccce-EEEEEEEEeeeEcCCCeEEEEECCCCEEE
Confidence 10 1111 111111111000000 11111246799999999999988765 889999999987654 5899999999999
Q ss_pred ccEEEEccCCchhhhhhhcCCCCCcccCeEEEEEEeccCC-------CCccccceEEEec--CceEEEE---eec-----
Q 006440 233 GDLLIGADGIWSKVRKNLFGPQEAIYSGYTCYTGIADFVP-------ADIESVGYRVFLG--HKQYFVS---SDV----- 295 (645)
Q Consensus 233 a~lvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~--~~~~~~~---~~~----- 295 (645)
||+||||||++|.||+.+.+.....+.+...+.+.....+ ..+.......... ++..++. .+.
T Consensus 155 adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (412)
T 4hb9_A 155 VDVLVGADGSNSKVRKQYLPFIERFDVGVSMIIGRARLTPALTALLPQNFRDGTPNSIVPKSPDWLFISMWRAPVNIHVE 234 (412)
T ss_dssp ESEEEECCCTTCHHHHHHSTTCCCEEEEEEEEEEEEECCHHHHHHSCGGGTSSCCEEECCSSSEEEEEEEEEEESCTTSC
T ss_pred eeEEEECCCCCcchHHHhCCCccccccceeEEEEEEecchhhhcchhhhhccCCcceEeecCCCcceeeeeecCCceeEE
Confidence 9999999999999999997665555555555555443221 1111111111111 1111111 111
Q ss_pred ---CC--CeEEEEEEEeCCCCCCC----CCcchHHHHHHHHcCCChhHHHHHHcCCccceeecccccCCCCCcccCCcEE
Q 006440 296 ---GA--GKMQWYAFHKEPAGGVD----GPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVT 366 (645)
Q Consensus 296 ---~~--~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rvv 366 (645)
.. ....|............ ..+...+.+.+.+..|.+.+.+++.......+..+......+..+|..|||+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~li~~~~~~~~~~~~~~~~~~~~~~~~grv~ 314 (412)
T 4hb9_A 235 ASLAEIDNFIVWVYVAATDSLPDNITDFSAEALCDLVQSRMISWDPSLHTLVQQSDMENISPLHLRSMPHLLPWKSSTVT 314 (412)
T ss_dssp GGGCCEEEEEEEEEEEEGGGSCTTGGGCCHHHHHHHHHHHTTTSCHHHHHHHHTSCTTCCEEEEEEECCCCCCCCCCSEE
T ss_pred EeccCCCceEEEEEecccccccccccccchHHHHHHHHHHhccCChHHHHHHHhcccceeccchhccccccccccccCEE
Confidence 11 11233332222111111 1223345677788899999998888776666666666666667789999999
Q ss_pred EEccccCcCCCCCcchhhHHHHHHHHHHHHHHHHhhccCCCCChhhHHHHHHHHHHHhhhHHHHHHHHHHHH
Q 006440 367 LLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSA 438 (645)
Q Consensus 367 LvGDAAH~~~P~~GqG~n~al~Da~~La~~L~~~~~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~~ 438 (645)
|||||||.|+|++|||+|+||+||.+|+++|+....+ ..+.+.+|+.||++|++++..++.+++..
T Consensus 315 LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~~~~------~~~~~~aL~~Ye~~R~~~~~~~~~~s~~~ 380 (412)
T 4hb9_A 315 LLGDAIHNMTPMTGSGANTALRDALLLTQKLASVASG------HEELVKAISDYEQQMRAYANEIVGISLRS 380 (412)
T ss_dssp ECTHHHHCSSCCSSSHHHHHHHHHHHHHHHHHHHHTT------SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEcccccCCCchhhHHHHHHHHHHHHHHHHHHHhcC------CcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998764 33567899999999999999998887643
No 3
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=100.00 E-value=4.3e-37 Score=328.94 Aligned_cols=339 Identities=19% Similarity=0.242 Sum_probs=234.6
Q ss_pred CCCcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCc-hHHHHHHhcChhHHHHHHHhccccc
Q 006440 74 ENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQS-NALAALEAIDLDVAEEVMRAGCVTG 152 (645)
Q Consensus 74 ~~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~-~~~~~l~~l~~g~~~~~~~~~~~~~ 152 (645)
.+..+||+||||||+|+++|+.|+++|++|+|+|+.+.+.... .++.+.+.+ .+.++|+.+ |+++++........
T Consensus 23 ~~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~--~g~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~~~ 98 (398)
T 2xdo_A 23 LLSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARI--FGGTLDLHKGSGQEAMKKA--GLLQTYYDLALPMG 98 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCC--CSCCEECCTTTHHHHHHHT--TCHHHHHHHCBCCC
T ss_pred ccCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccc--cCCeeeeCCccHHHHHHhc--ChHHHHHHhhcccc
Confidence 3456899999999999999999999999999999975432211 122455654 578999999 78888876543322
Q ss_pred cccccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeCCeEEEEEcCCcEEe
Q 006440 153 DRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYA 232 (645)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ 232 (645)
. .+.+ ..+........ ......+ ...++|..|.+.|.+.+....++++++|++++.++++++|++.+|++++
T Consensus 99 ~---~~~~-~~g~~~~~~~~-~~~~~~~---~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ 170 (398)
T 2xdo_A 99 V---NIAD-EKGNILSTKNV-KPENRFD---NPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKKWTLTFENKPSET 170 (398)
T ss_dssp E---EEEC-SSSEEEEECCC-GGGTTSS---CCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSSSEEEEETTSCCEE
T ss_pred e---EEEC-CCCCchhhccc-cccCCCC---CceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCCEEEEEECCCcEEe
Confidence 2 1222 12322222100 0001111 2368999999999998865558899999999998888999999998999
Q ss_pred ccEEEEccCCchhhhhhhcCCCCCcccCeEEEEEEeccCC---CCc---cccceEEEecCceEEEEeecCCCeEEEEEEE
Q 006440 233 GDLLIGADGIWSKVRKNLFGPQEAIYSGYTCYTGIADFVP---ADI---ESVGYRVFLGHKQYFVSSDVGAGKMQWYAFH 306 (645)
Q Consensus 233 a~lvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (645)
||+||+|||.+|.+|+.+. ...+.|.+..++.+...... +.. ...++..+++++..++.++..++.+.|++..
T Consensus 171 ad~vV~AdG~~S~vR~~l~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~ 249 (398)
T 2xdo_A 171 ADLVILANGGMSKVRKFVT-DTEVEETGTFNIQADIHQPEINCPGFFQLCNGNRLMASHQGNLLFANPNNNGALHFGISF 249 (398)
T ss_dssp ESEEEECSCTTCSCCTTTC-CCCCEEEEEEEEEEEESSHHHHSHHHHHHHTTSEEEEEETTEEEEEEEEETTEEEEEEEE
T ss_pred cCEEEECCCcchhHHhhcc-CCCceEcceEEEEEEeCchhccCchhHhhcCCceEEEecCCCeEEEEeCCCCcEEEEEEE
Confidence 9999999999999999884 33455655555555432110 000 0123334456666677777777777777655
Q ss_pred eCCCCCC-------CCCcchHHHHHHHHcCCChhHHHHHHcCCccceeecccccCCCCCcccC-C--cEEEEccccCcCC
Q 006440 307 KEPAGGV-------DGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGR-G--RVTLLGDSVHAMQ 376 (645)
Q Consensus 307 ~~~~~~~-------~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~--rvvLvGDAAH~~~ 376 (645)
..+.... ..++...+.+.+.|..|.+.+.+.+.... .+..+.++......+|.. + ||+|||||||.++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~rv~LiGDAAh~~~ 327 (398)
T 2xdo_A 250 KTPDEWKNQTQVDFQNRNSVVDFLLKEFSDWDERYKELIHTTL--SFVGLATRIFPLEKPWKSKRPLPITMIGDAAHLMP 327 (398)
T ss_dssp ECCTTC---CCSCTTCHHHHHHHHHHHTTTSCHHHHHHHHHCS--CCEEEEEEECCCCSCCCSCCSSCEEECTHHHHCCC
T ss_pred ecCcccccccccCcCCHHHHHHHHHHHHcCCChHHHHHHhCcc--cceeeeeEeccCCCCcccCCCccEEEEeehhccCC
Confidence 4332211 11223345677778889888877776522 233344444444457865 5 9999999999999
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHhhccCCCCChhh-HHHHHHHHHHHhhhHHHHHHHHHH
Q 006440 377 PNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPID-IVSALKSYERARRLRVAVIHGLAR 436 (645)
Q Consensus 377 P~~GqG~n~al~Da~~La~~L~~~~~~~~~~~~~~~-~~~~L~~Y~~~R~~~~~~~~~~s~ 436 (645)
|++|||+|+||+||.+|+++|... ..+ .+.+|+.|+++|++++..++..+.
T Consensus 328 P~~GqG~n~ai~Da~~La~~L~~~---------~~~~~~~~L~~Y~~~r~~~~~~~~~~s~ 379 (398)
T 2xdo_A 328 PFAGQGVNSGLVDALILSDNLADG---------KFNSIEEAVKNYEQQMFIYGKEAQEEST 379 (398)
T ss_dssp CTTSCSHHHHHHHHHHHHHHHHSC---------CSSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCccHHHHHHHHHHHHHHHHhc---------cCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999763 113 578999999999999988776654
No 4
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=100.00 E-value=6.7e-37 Score=327.33 Aligned_cols=330 Identities=22% Similarity=0.272 Sum_probs=227.0
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhcccccccc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~ 155 (645)
..+||+||||||+|+++|+.|+++|++|+|+|+.+......+ .++.+.++++++|+.+ |+++ ..... ....+
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~---~g~~l~~~~~~~l~~~--g~~~--~~~~~-~~~~~ 75 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFG---TGIVVQPELVHYLLEQ--GVEL--DSISV-PSSSM 75 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCS---CEEECCHHHHHHHHHT--TCCG--GGTCB-CCCEE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccc---cccccChhHHHHHHHc--CCcc--ccccc-cccce
Confidence 458999999999999999999999999999999765322222 3678899999999999 5544 12111 11111
Q ss_pred ccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeCCeEEEEEcCCcEEeccE
Q 006440 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDL 235 (645)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a~l 235 (645)
. +.+...+......+ .+ ...+.+..|.+.|.+.+....++++++|++++.++++++|++.+|++++||+
T Consensus 76 ~-~~~~~~g~~~~~~~---------~~-~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~ 144 (397)
T 2vou_A 76 E-YVDALTGERVGSVP---------AD-WRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANW 144 (397)
T ss_dssp E-EEETTTCCEEEEEE---------CC-CCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSCEEEEETTSCEEEESE
T ss_pred E-EEecCCCCcccccc---------Cc-ccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCE
Confidence 1 11111122111111 11 1246788999999988755568999999999999899999999999999999
Q ss_pred EEEccCCchhhhhhhcCCCCCcccCeEEEEEEeccCCCCcc-----ccceEEEecCceEEEEeecCCC------eEEEEE
Q 006440 236 LIGADGIWSKVRKNLFGPQEAIYSGYTCYTGIADFVPADIE-----SVGYRVFLGHKQYFVSSDVGAG------KMQWYA 304 (645)
Q Consensus 236 vVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 304 (645)
||+|||.+|.||+.+. ...+.|.++.++.++......+.. ...+.++.+++..++.++.+++ .+.|++
T Consensus 145 vV~AdG~~S~vr~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 223 (397)
T 2vou_A 145 VIGADGGASVVRKRLL-GIEPTYAGYVTWRGVLQPGEVADDVWNYFNDKFTYGLLDDGHLIAYPIPGRENAESPRLNFQW 223 (397)
T ss_dssp EEECCCTTCHHHHHHH-CCCCEEEEEEEEEEEECTTSSCHHHHHHHTTEEEEEEETTEEEEEEEECCSSTTSCCEEEEEE
T ss_pred EEECCCcchhHHHHhc-cCCCCccceEEEEEEeeccccChhhhhhhcCceeEEecCCCEEEEEECCCCCCccceeEEEEE
Confidence 9999999999999997 556667766677766542211111 1234556667766666666543 455655
Q ss_pred EEeCCCCC------CC--------------CCcchHHHHHHHHc-CCChhHHHHHHcCCccceeecccccCCCCCcccCC
Q 006440 305 FHKEPAGG------VD--------------GPEGKKERLLKIFE-GWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRG 363 (645)
Q Consensus 305 ~~~~~~~~------~~--------------~~~~~~~~l~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (645)
+...+... .+ ......+++.+.+. .|.+ +.+.+...... ..+++... ...+|..|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~-~~~~~~~g 299 (397)
T 2vou_A 224 YWNVAEGPDLDELMTDVRGIRLPTSVHNNSLNPHNLRQFHSKGESLFKP-FRDLVLNASSP--FVTVVADA-TVDRMVHG 299 (397)
T ss_dssp EEECCTTHHHHHHTBCTTSCBCSSEECGGGCCHHHHHHHHHHHTTSCHH-HHHHHHHCSSC--EEEEEEEB-CCSCSEET
T ss_pred EecCCCccchhhhccCCCCcccccccCcccCCHHHHHHHHHHHHhhChH-HHHHHhccCCc--ceeeeeee-cCCceecC
Confidence 54433210 00 01123344455543 5656 66666544321 23344433 45689999
Q ss_pred cEEEEccccCcCCCCCcchhhHHHHHHHHHHHHHHHHhhccCCCCChhhHHHHHHHHHHHhhhHHHHHHHHHHHHH
Q 006440 364 RVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAA 439 (645)
Q Consensus 364 rvvLvGDAAH~~~P~~GqG~n~al~Da~~La~~L~~~~~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~~~ 439 (645)
||+|||||||.|+|++|||+|+||+||..|+++|... .+...+|+.|+++|++++..++..++...
T Consensus 300 rv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~----------~~~~~~L~~Ye~~R~~~~~~~~~~s~~~~ 365 (397)
T 2vou_A 300 RVLLIGDAAVTPRPHAAAGGAKASDDARTLAEVFTKN----------HDLRGSLQSWETRQLQQGHAYLNKVKKMA 365 (397)
T ss_dssp TEEECGGGTSBCCGGGSCHHHHHHHHHHHHHHHHHHC----------SCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEeccccccCCcchhhHHHHHHHHHHHHHHHhcC----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999751 23478999999999999999888776543
No 5
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=100.00 E-value=3.3e-38 Score=350.67 Aligned_cols=373 Identities=18% Similarity=0.153 Sum_probs=241.4
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhcccccccc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~ 155 (645)
+.+||+||||||+|+++|+.|+++|++|+|||+.+.+... ..++.++++++++|+++ |+++++...+.......
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~----~r~~~l~~~s~~~l~~l--Gl~~~l~~~~~~~~~~~ 121 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGH----DRAGALHIRTVETLDLR--GLLDRFLEGTQVAKGLP 121 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCS----SSCCCBCHHHHHHHHTT--TCHHHHTTSCCBCSBCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCC----ceEEEECHHHHHHHHHc--CChHHHHhcCcccCCce
Confidence 4689999999999999999999999999999998654322 22577999999999999 78888866543222110
Q ss_pred ccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcC--CceEEcCceEEEEEeeCCeEEEEE--cCC-cE
Q 006440 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVL--ENG-QC 230 (645)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~v~~--~~g-~~ 230 (645)
..+... ....+. ......+..+.++|..|++.|.+.+. ...++++++|++++.++++++|++ .+| ++
T Consensus 122 ---~~~~~~-~~~~~~----~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~ 193 (570)
T 3fmw_A 122 ---FAGIFT-QGLDFG----LVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYP 193 (570)
T ss_dssp ---BTTBCT-TCCBGG----GSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEE
T ss_pred ---eCCccc-cccccc----ccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEE
Confidence 111000 011111 11123445678999999999998763 235788999999999999999888 678 78
Q ss_pred EeccEEEEccCCchhhhhhhc-CCCCCcccCeEEEEEEeccCCCCccccceEEEecCceEEEE-eecCCCeE-EEEEEEe
Q 006440 231 YAGDLLIGADGIWSKVRKNLF-GPQEAIYSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVS-SDVGAGKM-QWYAFHK 307 (645)
Q Consensus 231 i~a~lvVgADG~~S~vR~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~ 307 (645)
++||+||+|||.+|.||+.+. ......|.+ .++.......... ..+.+...+..+++. +|..++.+ .|++...
T Consensus 194 ~~a~~vV~ADG~~S~vR~~lGi~~~~~~~~~-~~~~~~v~~~~~~---~~~~~~~~~~G~~~~~~P~~~g~~~~i~~~~~ 269 (570)
T 3fmw_A 194 VRARYGVGCDGGRSTVRRLAADRFPGTEATV-RALIGYVTTPERE---VPRRWERTPDGILVLAFPPEGGLGPGWSSSST 269 (570)
T ss_dssp EEESEEEECSCSSCHHHHHTTCCCCCCCCCE-EEEEEECCCCSCS---SCCCCCCCCSSCEEECCCC------CEEEEEE
T ss_pred EEeCEEEEcCCCCchHHHHcCCCCccceeee-EEEEEEEEecCCC---cceEEEecCCEEEEEEeecCCCeEEEEEEEeC
Confidence 999999999999999999983 334445543 3333332221111 112222233334444 67777655 4554443
Q ss_pred CCCCCCCCCcchHHHHHHHHcCCChhHHHHHHcCCcc-ceeecccccCCCCCcccCCcEEEEccccCcCCCCCcchhhHH
Q 006440 308 EPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEE-AILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMA 386 (645)
Q Consensus 308 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~rvvLvGDAAH~~~P~~GqG~n~a 386 (645)
.............+++.+.+..+.+... ...... ....+++.. ....+|..+||+|+|||||.++|++|||+|+|
T Consensus 270 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~-~~a~~~~~grv~LvGDAAH~~~P~~GqG~n~g 345 (570)
T 3fmw_A 270 GHSPAADEGPVTLEDLGAAVARVRGTPL---TLTEPVSWLSRFGDAS-RQAKRYRSGRVLLAGDAAHVHFPIGGQGLNTG 345 (570)
T ss_dssp SCC-----CCCCHHHHHHHTTSSSSCCC---CCCSCCEEEEEECCCC-EECSCSEETTEEECGGGTEECCCCSSCHHHHH
T ss_pred CCCccccccCCCHHHHHHHHHHHhhccc---ccceeeeeeEEeeccc-ccccccccCCEEEEEecceecCCCcCcCHhHH
Confidence 2221111122345667777766543211 111111 122222222 23568999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccCCCCChhhHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhHhhhhhccCCCccchhhhcccCC
Q 006440 387 IEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAAVMASTYKAYLGVGLGPLSFLTKFRIPH 466 (645)
Q Consensus 387 l~Da~~La~~L~~~~~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~~ 466 (645)
|+||.+|+|+|+..+++. ..+.+|+.|+++|++++..++..++.+ ..+|..+..++..+|++.+.+
T Consensus 346 l~DA~~La~~La~~~~g~-------~~~~lL~~Ye~eR~~~~~~~~~~s~~~-------~~l~~~~~~~~~~lR~~~~~l 411 (570)
T 3fmw_A 346 LQDAVNLGWKLAARVRGW-------GSEELLDTYHDERHPVAERVLLNTRAQ-------LALMRPDEQHTTPLRGFVEEL 411 (570)
T ss_dssp HHHHHHHHHHHHHHHHSC-------CCHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHSCSCTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCC-------CcHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHhcCCchHHHHHHHHHHHH
Confidence 999999999999987541 236899999999999999887766542 234555444478899988876
Q ss_pred CCccc--ceeeeeccchhhhH
Q 006440 467 PGRVG--GRFFIDLAMPLMLS 485 (645)
Q Consensus 467 ~~~~~--~~~~~~~~~~~~~~ 485 (645)
. .++ ++.++++++++.+.
T Consensus 412 ~-~~~~~~~~~~~~~~g~~~~ 431 (570)
T 3fmw_A 412 L-GTDEVNRYFTGMITGTDVR 431 (570)
T ss_dssp T-TSHHHHHHHHHHHHSTTCC
T ss_pred h-cCHHHHHHHHHHHhCCCcc
Confidence 6 343 46777776665543
No 6
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=100.00 E-value=7.1e-37 Score=335.56 Aligned_cols=332 Identities=17% Similarity=0.163 Sum_probs=219.7
Q ss_pred CCcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccc
Q 006440 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (645)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~ 154 (645)
..++||+||||||+|+++|+.|+++|++|+|+|+.+.+... ..++.++++++++|+++ |+++++... . . ..
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~----~r~~~l~~~~~~~l~~l--Gl~~~~~~~-~-~-~~ 80 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGE----SRGLGFTARTMEVFDQR--GILPAFGPV-E-T-ST 80 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCC----CCSEEECHHHHHHHHHT--TCGGGGCSC-C-E-ES
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCC----CceeEECHHHHHHHHHC--CCHHHHHhc-c-c-cc
Confidence 35689999999999999999999999999999998654321 23678999999999999 676665432 1 0 00
Q ss_pred cccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcC--CceEEcCceEEEEEeeCCeEEEEEcCCc---
Q 006440 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQ--- 229 (645)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~v~~~~g~--- 229 (645)
.. .. +.....+.. .....+..+.++|..|++.|.+.+. ...++++++|+++++++++++|++.+++
T Consensus 81 ~~-~~----~~~~~~~~~----~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~ 151 (499)
T 2qa2_A 81 QG-HF----GGRPVDFGV----LEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPR 151 (499)
T ss_dssp EE-EE----TTEEEEGGG----STTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEE
T ss_pred cc-ee----cceeccccc----CCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcE
Confidence 00 00 111111111 1123456789999999999988763 2458899999999999999999998875
Q ss_pred EEeccEEEEccCCchhhhhhhc-CCCCCcccCeEEEEEEeccCCCCccccceEEEecCceEEEEeecCCCeEEEEEEEeC
Q 006440 230 CYAGDLLIGADGIWSKVRKNLF-GPQEAIYSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKE 308 (645)
Q Consensus 230 ~i~a~lvVgADG~~S~vR~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (645)
+++||+||+|||.+|.||+.+. ......+.. ..+.+..... ... ..+..+..++.+++.+|.+++.+.+.+....
T Consensus 152 ~~~a~~vVgADG~~S~VR~~lg~~~~~~~~~~-~~~~~~v~~~--~~~-~~~~~~~~~~g~~~~~P~~~g~~~~~~~~~~ 227 (499)
T 2qa2_A 152 SLTTRYVVGCDGGRSTVRKAAGFDFPGTSASR-EMFLADIRGC--EIT-PRPIGETVPLGMVMSAPLGDGVDRIIVCERG 227 (499)
T ss_dssp EEEEEEEEECCCTTCHHHHHTTCCCCEECCCC-CEEEEEEESC--CCC-CEEEEEEETTEEEEEEECSSSCEEEEEEETT
T ss_pred EEEeCEEEEccCcccHHHHHcCCCCCCCCCcc-EEEEEEEEEC--CCC-cceEEEECCCeEEEEEEcCCCEEEEEEEecC
Confidence 7999999999999999999983 233333333 2333332221 111 1134455566677788888777666554322
Q ss_pred CCCCCCCCcchHHHHHHHHcCCChhHHHHHHcCCccceeecccccCCCCCcccCCcEEEEccccCcCCCCCcchhhHHHH
Q 006440 309 PAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIE 388 (645)
Q Consensus 309 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rvvLvGDAAH~~~P~~GqG~n~al~ 388 (645)
............+++.+.+..+.... +..........+... .....+|..|||+|+|||||.++|++|||+|+||+
T Consensus 228 ~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~-~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~ 303 (499)
T 2qa2_A 228 APARRRTGPPPYQEVAAAWQRLTGQD---ISHGEPVWVSAFGDP-ARQVSAYRRGRVLLAGDSAHVHLPAGGQGMNVSVQ 303 (499)
T ss_dssp CCCCCCSSSCCHHHHHHHHHHHHSCC---CTTCEEEEEEEECCC-EEECSCSEETTEEECGGGTEEECCCSSCHHHHHHH
T ss_pred CCCccccCCCCHHHHHHHHHHHhCCC---CCccceeEEEEEeCC-cEEcccccCCCEEEEecccccCCCccccchhhhHH
Confidence 21111111223344444333211000 000000111111111 12356889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccCCCCChhhHHHHHHHHHHHhhhHHHHHHHHHHHHH
Q 006440 389 DGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAA 439 (645)
Q Consensus 389 Da~~La~~L~~~~~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~~~ 439 (645)
||.+|+|+|+..+++. ..+.+|++|+++|++++..++..++.+.
T Consensus 304 DA~~La~~La~~l~g~-------~~~~~L~~Ye~eR~~~~~~~~~~s~~~~ 347 (499)
T 2qa2_A 304 DSVNLGWKLAAVVSGR-------APAGLLDTYHEERHPVGRRLLMNTQAQG 347 (499)
T ss_dssp HHHHHHHHHHHHHTTS-------SCTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCC-------CChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999987541 2357999999999999998887776443
No 7
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=100.00 E-value=9.1e-37 Score=334.77 Aligned_cols=333 Identities=17% Similarity=0.177 Sum_probs=218.4
Q ss_pred CCCcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhcccccc
Q 006440 74 ENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGD 153 (645)
Q Consensus 74 ~~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~ 153 (645)
....+||+||||||+|+++|+.|+++|++|+|+|+.+.+... ..++.++++++++|+++ |+++++... . ..
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~----~r~~~l~~~~~~~l~~l--Gl~~~~~~~-~-~~- 78 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGE----SRGLGFTARTMEVFDQR--GILPRFGEV-E-TS- 78 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCC----CCSEEECHHHHHHHHTT--TCGGGGCSC-C-BC-
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCC----CCcceECHHHHHHHHHC--CCHHHHHhc-c-cc-
Confidence 345689999999999999999999999999999998654322 22678999999999999 677665432 1 00
Q ss_pred ccccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcC--CceEEcCceEEEEEeeCCeEEEEEcCCc--
Q 006440 154 RINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQ-- 229 (645)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~v~~~~g~-- 229 (645)
... .. +.....+.. ....++..+.++|..|++.|.+.+. ...++++++|+++++++++++|++.++.
T Consensus 79 ~~~-~~----~~~~~~~~~----~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~ 149 (500)
T 2qa1_A 79 TQG-HF----GGLPIDFGV----LEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGK 149 (500)
T ss_dssp CEE-EE----TTEEEEGGG----STTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEE
T ss_pred ccc-cc----cceeccccc----CCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCC
Confidence 000 00 111111111 1112345688999999999988763 2358899999999999999999988775
Q ss_pred -EEeccEEEEccCCchhhhhhhc-CCCCCcccCeEEEEEEeccCCCCccccceEEEecCceEEEEeecCCCeEEEEEEEe
Q 006440 230 -CYAGDLLIGADGIWSKVRKNLF-GPQEAIYSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHK 307 (645)
Q Consensus 230 -~i~a~lvVgADG~~S~vR~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (645)
+++||+||+|||.+|.||+.+. ......+.. ..+.+..... +... .+..+..++.+++.+|.+++.+.+++...
T Consensus 150 ~~~~a~~vVgADG~~S~VR~~lg~~~~~~~~~~-~~~~~~~~~~--~~~~-~~~~~~~~~g~~~~~p~~~g~~~~~~~~~ 225 (500)
T 2qa1_A 150 HTLRAAYLVGCDGGRSSVRKAAGFDFPGTAATM-EMYLADIKGV--ELQP-RMIGETLPGGMVMVGPLPGGITRIIVCER 225 (500)
T ss_dssp EEEEESEEEECCCTTCHHHHHTTCCCCEECCCC-EEEEEEEESC--CCCC-EEEEEEETTEEEEEEEETTTEEEEEEEET
T ss_pred EEEEeCEEEECCCcchHHHHHcCCCcCCCccce-EEEEEEEEeC--CCCC-ceEEEECCCcEEEEEEcCCCEEEEEEEcC
Confidence 7999999999999999999983 233333433 3333332221 1111 13445556667777888877766655432
Q ss_pred CCCCCCCCCcchHHHHHHHHcCCChhHHHHHHcCCccceeecccccCCCCCcccCCcEEEEccccCcCCCCCcchhhHHH
Q 006440 308 EPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAI 387 (645)
Q Consensus 308 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rvvLvGDAAH~~~P~~GqG~n~al 387 (645)
.............+++.+.+..+.... +..........+... .....+|..|||+|+|||||.++|++|||+|+||
T Consensus 226 ~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~-~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi 301 (500)
T 2qa1_A 226 GTPPQRRETPPSWHEVADAWKRLTGDD---IAHAEPVWVSAFGNA-TRQVTEYRRGRVILAGDSAHIHLPAGGQGMNTSI 301 (500)
T ss_dssp TCCC-----CCCHHHHHHHHHHHHSCC---CTTSEEEEEEEEECC-EEECSCSEETTEEECGGGTEECCCCSSCHHHHHH
T ss_pred CCCCccccCCCCHHHHHHHHHHhcCCC---CCccceeEEEEeccC-cEEccccccCCEEEEEccccCCCCccccchhhhH
Confidence 221111111122344443332211000 000000111111111 1235688999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccCCCCChhhHHHHHHHHHHHhhhHHHHHHHHHHHHH
Q 006440 388 EDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAA 439 (645)
Q Consensus 388 ~Da~~La~~L~~~~~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~~~ 439 (645)
+||.+|+|+|+..+++. ..+.+|+.|+++|++++..++..++.+.
T Consensus 302 ~DA~~La~~La~~~~g~-------~~~~~L~~Y~~eR~~~~~~~~~~s~~~~ 346 (500)
T 2qa1_A 302 QDAVNLGWKLGAVVNGT-------ATEELLDSYHSERHAVGKRLLMNTQAQG 346 (500)
T ss_dssp HHHHHHHHHHHHHHTTS-------SCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC-------CChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999987541 2368999999999999998887776443
No 8
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2.9e-37 Score=330.50 Aligned_cols=341 Identities=20% Similarity=0.249 Sum_probs=234.3
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhcccccccc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~ 155 (645)
.++||+||||||+|+++|+.|+++|++|+|+|+.+... .. ..++.+.++++++|+++ |+++++...+... ..+
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~-~~---~~~~~l~~~~~~~l~~~--g~~~~~~~~~~~~-~~~ 77 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRER-AI---NGADLLKPAGIRVVEAA--GLLAEVTRRGGRV-RHE 77 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC-------CCCCEECHHHHHHHHHT--TCHHHHHHTTCEE-ECE
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCC-cc---CceeeECchHHHHHHHc--CcHHHHHHhCCCc-cee
Confidence 35799999999999999999999999999999975431 11 22577999999999999 7788876543321 111
Q ss_pred ccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCC---ceEEcCceEEEEEeeCCeE--EEEEcCCcE
Q 006440 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGD---EIILNESNVIDFKDHGDKV--SVVLENGQC 230 (645)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~---~~i~~~~~v~~i~~~~~~v--~v~~~~g~~ 230 (645)
. +.+. .+.....++.... .....++.++|..|.+.|.+.+.. ..++++++|++++.+++++ .|++.+|++
T Consensus 78 ~-~~~~-~g~~~~~~~~~~~---~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~ 152 (399)
T 2x3n_A 78 L-EVYH-DGELLRYFNYSSV---DARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRV 152 (399)
T ss_dssp E-EEEE-TTEEEEEEETTSS---CGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCE
T ss_pred E-EEeC-CCCEEEecchHHh---cccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCE
Confidence 1 1111 1222222221110 011246789999999999998754 3588999999999988888 899999989
Q ss_pred EeccEEEEccCCchhhhhhhcCCCCCc--ccCe--EEEEEEeccCCCCccccceEEEecC-ceEEEEeecCCCeEEEEEE
Q 006440 231 YAGDLLIGADGIWSKVRKNLFGPQEAI--YSGY--TCYTGIADFVPADIESVGYRVFLGH-KQYFVSSDVGAGKMQWYAF 305 (645)
Q Consensus 231 i~a~lvVgADG~~S~vR~~l~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 305 (645)
++||+||+|||.+|.+|+.+....... +.+. .++.+.... +.... . .++.+ +.+++.+|.+++.+.|+..
T Consensus 153 ~~ad~vV~AdG~~s~vr~~lg~~~~~~~p~~~~~~~~~~~~~~~---~~~~~-~-~~~~~~~~~~~~~p~~~~~~~~~~~ 227 (399)
T 2x3n_A 153 LRPRVVVGADGIASYVRRRLLDIDVERRPYPSPMLVGTFALAPC---VAERN-R-LYVDSQGGLAYFYPIGFDRARLVVS 227 (399)
T ss_dssp EEEEEEEECCCTTCHHHHHTSCCCCCCCCCSSCEEEEEEECCHH---HHHCE-E-EEECTTSCEEEEEEETTTEEEEEEE
T ss_pred EECCEEEECCCCChHHHHHhCCCccccCCCCCCceEEEEEEecC---CCCCc-c-EEEcCCCcEEEEEEcCCCEEEEEEE
Confidence 999999999999999999884332223 4444 455543321 11111 2 45566 6677778887778888764
Q ss_pred EeCCCCCCCCCcchHHHHHHHHcCCChhHH-HHHHcCCccceeecccccCCCCCcccCCcEEEEccccCcCCCCCcchhh
Q 006440 306 HKEPAGGVDGPEGKKERLLKIFEGWCDNVV-DLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGC 384 (645)
Q Consensus 306 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~rvvLvGDAAH~~~P~~GqG~n 384 (645)
...............+.+.+.+..|.+.+. ..+..........+++.......+|..+||+|+|||||.++|++|||+|
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~lvGDAAh~~~P~~GqG~~ 307 (399)
T 2x3n_A 228 FPREEARELMADTRGESLRRRLQRFVGDESAEAIAAVTGTSRFKGIPIGYLNLDRYWADNVAMLGDAIHNVHPITGQGMN 307 (399)
T ss_dssp CCHHHHHHHHHSTTSHHHHHHHHTTCCGGGHHHHHTCCCSTTCEECCCCCEECSCSEETTEEECGGGTEECCGGGCCHHH
T ss_pred eCccccccccccCCHHHHHHHHhhcCCcchhhHHhcCCccceEEechhhcccccccccCcEEEEechhccCCCcccccHH
Confidence 421100000000123566777777776652 3343333112233444443445689999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCChhhHHHHHHHHHHHhhhHHHHHHHHHHHHH
Q 006440 385 MAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAA 439 (645)
Q Consensus 385 ~al~Da~~La~~L~~~~~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~~~ 439 (645)
+||+||..|+++|.+.++. ..+...+|+.|+++|++++..++..++...
T Consensus 308 ~al~da~~La~~L~~~~~~------~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~ 356 (399)
T 2x3n_A 308 LAIEDASALADALDLALRD------ACALEDALAGYQAERFPVNQAIVSYGHALA 356 (399)
T ss_dssp HHHHHHHHHHHHHHHHHTT------SSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhcc------cchHHHHHHHHHHHhccHHHHHHHHHHHhh
Confidence 9999999999999987642 124578999999999999998888776543
No 9
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=100.00 E-value=8.2e-36 Score=320.33 Aligned_cols=335 Identities=30% Similarity=0.440 Sum_probs=229.2
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCe-EEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFE-VLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~-~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~ 154 (645)
..+||+||||||+|+++|+.|+++|++ |+|+|+.+... .. ..++.+.++++++|+.+ |+++.+...+.... .
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~-~~---g~g~~l~~~~~~~l~~l--g~~~~l~~~~~~~~-~ 75 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIR-PL---GVGINIQPAAVEALAEL--GLGPALAATAIPTH-E 75 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCC-CC---SCEEEECHHHHHHHHHT--TCHHHHHHHSEEEC-E
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcc-cc---eeEEEEChHHHHHHHHC--CChHHHHhhCCCcc-e
Confidence 458999999999999999999999999 99999975432 12 23678999999999999 77888876543211 1
Q ss_pred cccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHc----CCceEEcCceEEEEEeeCCeEEEEEcC---
Q 006440 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV----GDEIILNESNVIDFKDHGDKVSVVLEN--- 227 (645)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~----~~~~i~~~~~v~~i~~~~~~v~v~~~~--- 227 (645)
+. +.+. .+......... .......+ .+.++|..|.+.|.+.+ +...++++++|++++. +++++|++.+
T Consensus 76 ~~-~~~~-~g~~~~~~~~~-~~~~~~~~-~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v~v~~~~~~~ 150 (410)
T 3c96_A 76 LR-YIDQ-SGATVWSEPRG-VEAGNAYP-QYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDGRVLIGARDGH 150 (410)
T ss_dssp EE-EECT-TSCEEEEEECG-GGGTCSSC-EEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETTEEEEEEEETT
T ss_pred EE-EEcC-CCCEEeeccCC-ccccCCCC-eeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCccEEEEecCCC
Confidence 11 1221 12222211110 01111223 46899999999998875 3335889999999998 7778888875
Q ss_pred C--cEEeccEEEEccCCchhhhhhhcCC-CCCcccCeEEEEEEeccCCCCccccceEEEec--CceEEEEeecCC-----
Q 006440 228 G--QCYAGDLLIGADGIWSKVRKNLFGP-QEAIYSGYTCYTGIADFVPADIESVGYRVFLG--HKQYFVSSDVGA----- 297 (645)
Q Consensus 228 g--~~i~a~lvVgADG~~S~vR~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~----- 297 (645)
| ++++||+||+|||.+|.||+.+.+. ....|.+...+.++....+.. .. ....+.+ ....++.+|..+
T Consensus 151 g~~~~~~ad~vV~AdG~~S~vR~~l~~~~~~~~~~g~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~p~~~~~~~~ 228 (410)
T 3c96_A 151 GKPQALGADVLVGADGIHSAVRAHLHPDQRPLSHGGITMWRGVTEFDRFL-DG-KTMIVANDEHWSRLVAYPISARHAAE 228 (410)
T ss_dssp SCEEEEEESEEEECCCTTCHHHHHHCTTCCCCEEEEEEEEEEEEEESCCT-TS-SEEEEEECTTCCEEEEEECCHHHHTT
T ss_pred CCceEEecCEEEECCCccchhHHHhcCCCCCCCcCCeeEEEeeccccccc-CC-CeEEEecCCCCcEEEEEecCCcccCC
Confidence 7 5799999999999999999998533 234566655555554322111 11 1223333 245566666642
Q ss_pred --CeEEEEEEEeCC------CCCCCCCcchHHHHHHHHcCCCh---hHHHHHHcCCccceeecccccCCCCCcccCCcEE
Q 006440 298 --GKMQWYAFHKEP------AGGVDGPEGKKERLLKIFEGWCD---NVVDLILATDEEAILRRDIYDRTPIFTWGRGRVT 366 (645)
Q Consensus 298 --~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rvv 366 (645)
..+.|+...... ...........+++++.+..|.. .+.+++..... +..+++....+..+|..+||+
T Consensus 229 g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~~grv~ 306 (410)
T 3c96_A 229 GKSLVNWVCMVPSAAVGQLDNEADWNRDGRLEDVLPFFADWDLGWFDIRDLLTRNQL--ILQYPMVDRDPLPHWGRGRIT 306 (410)
T ss_dssp TCEEEEEEEEEEHHHHCCCCSSCCTTCBCCHHHHHHHHTTCCBTTBCHHHHHHTCSE--EEEEEEEECCCCSCCCBTTEE
T ss_pred CCcEEEEEEEecCcccccCCCccccCCCCCHHHHHHHhcCCCCchhHHHHHHhcCcc--cceeecccCCCccccccCCEE
Confidence 345676654321 01111122345778888888754 34555554432 334455555566789999999
Q ss_pred EEccccCcCCCCCcchhhHHHHHHHHHHHHHHHHhhccCCCCChhhHHHHHHHHHHHhhhHHHHHHHHHH
Q 006440 367 LLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLAR 436 (645)
Q Consensus 367 LvGDAAH~~~P~~GqG~n~al~Da~~La~~L~~~~~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~ 436 (645)
|||||||.++|++|||+|+||+||.+|+++|... .+.+.+|+.|+++|++++..++..++
T Consensus 307 LvGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~----------~~~~~~L~~Ye~~r~~~~~~~~~~s~ 366 (410)
T 3c96_A 307 LLGDAAHLMYPMGANGASQAILDGIELAAALARN----------ADVAAALREYEEARRPTANKIILANR 366 (410)
T ss_dssp ECTHHHHCCCSSTTCTHHHHHHHHHHHHHHHHHC----------SSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecccCCCCCccchhHHHHHHHHHHHHHHHhcc----------CCHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 9999999999999999999999999999999862 13578999999999999998887765
No 10
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=100.00 E-value=1.7e-35 Score=334.59 Aligned_cols=334 Identities=17% Similarity=0.211 Sum_probs=214.0
Q ss_pred cCcEEEEcCCHHHHHHHHHHHH-----CCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhcccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKR-----KGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVT 151 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~-----~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~ 151 (645)
.+||+||||||+||++|+.|++ +|++|+|||+.+.+.. . ..++.++++++++|+++ |+++++...+...
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~-~---gra~~l~~~tle~l~~l--Gl~~~l~~~~~~~ 81 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVY-N---GQADGLQCRTLESLKNL--GLADKILSEANDM 81 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCC-S---CSCCEECHHHHHHHHTT--TCHHHHHTTCBCC
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCC-C---CceeEEChHHHHHHHHC--CCHHHHHHhcccc
Confidence 5799999999999999999999 9999999999754332 1 23678999999999999 8888887654322
Q ss_pred ccccccccccC-CCceee--eccCCCchhhcCCCeEEeeCHHHHHHHHHHHcC-----CceEEcCceEEEEEeeC-----
Q 006440 152 GDRINGLVDGI-SGSWYI--KFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG-----DEIILNESNVIDFKDHG----- 218 (645)
Q Consensus 152 ~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~-----~~~i~~~~~v~~i~~~~----- 218 (645)
..+. +++.. .+.... .++... ........+.++|..|+++|.+.+. ...+++++++++++.++
T Consensus 82 -~~~~-~~~~~~~g~i~~~~~~~~~~--~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~ 157 (665)
T 1pn0_A 82 -STIA-LYNPDENGHIRRTDRIPDTL--PGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAED 157 (665)
T ss_dssp -CEEE-EEEECTTSCEEEEEEEESSC--TTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTC
T ss_pred -ceEE-EEeCCCCcceEeecccCccc--CCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCccccc
Confidence 1221 22211 121111 111100 0111222468999999999988763 23588999999998865
Q ss_pred ---CeEEEEEc------------------------------------------CC--cEEeccEEEEccCCchhhhhhhc
Q 006440 219 ---DKVSVVLE------------------------------------------NG--QCYAGDLLIGADGIWSKVRKNLF 251 (645)
Q Consensus 219 ---~~v~v~~~------------------------------------------~g--~~i~a~lvVgADG~~S~vR~~l~ 251 (645)
+++++++. +| ++++||+||||||++|.||+++.
T Consensus 158 ~~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~VR~~lg 237 (665)
T 1pn0_A 158 PEAYPVTMTLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSWVRRTLG 237 (665)
T ss_dssp TTCCCEEEEEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCHHHHHHT
T ss_pred CCCCCEEEEEEecccccccccccccccccccccccccccccccccccccccCCCCceEEEEeCEEEeccCCCCHHHHhcC
Confidence 46777664 35 57999999999999999999984
Q ss_pred CC-CCCcccCeEEEEEEeccCC-CCccc--cceEEEecCceEEEEeecCCCeEEEEEEEeCCC---CCCCCCcchHHHHH
Q 006440 252 GP-QEAIYSGYTCYTGIADFVP-ADIES--VGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPA---GGVDGPEGKKERLL 324 (645)
Q Consensus 252 ~~-~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~ 324 (645)
.. ....+.. .| ++.+..+ .+... ....++..+...++.+|..++.++|++...... ..........+.++
T Consensus 238 ~~~~g~~~~~--~~-~v~d~~~~~~~p~~~~~~~~~~~~~g~~~~~P~~~~~~r~~~~~~~~~~~~~~~~~~~~t~e~~~ 314 (665)
T 1pn0_A 238 FEMIGEQTDY--IW-GVLDAVPASNFPDIRSRCAIHSAESGSIMIIPRENNLVRFYVQLQARAEKGGRVDRTKFTPEVVI 314 (665)
T ss_dssp CCCEEEEEEE--EE-EEEEEEEECCCTTTTSEEEEECSSSCEEEEEECSTTCEEEEEEECC----------CCCCHHHHH
T ss_pred CCCCCCCccE--EE-EEEEEEECCCCCCcceEEEEEeCCCceEEEEEcCCCEEEEEEEeCCccccccccCcCCCCHHHHH
Confidence 22 2223322 11 2222111 11111 112233334556667788777666665543321 00011112233333
Q ss_pred HH----HcCCChhHHHHHHcCCccceeeccccc--CCCCCccc-CCcEEEEccccCcCCCCCcchhhHHHHHHHHHHHHH
Q 006440 325 KI----FEGWCDNVVDLILATDEEAILRRDIYD--RTPIFTWG-RGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVEL 397 (645)
Q Consensus 325 ~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~-~~rvvLvGDAAH~~~P~~GqG~n~al~Da~~La~~L 397 (645)
+. +..+.. ....+..+..+. .....+|. .+||+|+|||||+++|++|||||+||+||.+|+|+|
T Consensus 315 ~~~~~~~~~~~~---------~~~~~~~~~~~~~~~r~a~~~~~~gRV~L~GDAAH~~~P~~GqG~N~gi~DA~nLawkL 385 (665)
T 1pn0_A 315 ANAKKIFHPYTF---------DVQQLDWFTAYHIGQRVTEKFSKDERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKL 385 (665)
T ss_dssp HHHHHHHTTSCC---------EEEEEEEEEEEEEEEEECSCSEETTTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCcccC---------ceeeEEEEEeeeccceehhhcccCCCEEEEECccccCCCcccCCcchhHHHHHHHHHHH
Confidence 32 222210 001112222222 12356788 799999999999999999999999999999999999
Q ss_pred HHHhhccCCCCChhhHHHHHHHHHHHhhhHHHHHHHHHHHHH
Q 006440 398 EKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAA 439 (645)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~~~ 439 (645)
+.++++. ..+.+|+.|+++|++++..++.+++.+.
T Consensus 386 a~vl~g~-------a~~~lL~tYe~eR~p~a~~~i~~s~~~~ 420 (665)
T 1pn0_A 386 GLVLTGR-------AKRDILKTYEEERQPFAQALIDFDHQFS 420 (665)
T ss_dssp HHHHTTC-------BCGGGGHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCC-------CcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9987641 2357899999999999998888776543
No 11
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=100.00 E-value=1.9e-36 Score=321.78 Aligned_cols=323 Identities=24% Similarity=0.303 Sum_probs=220.6
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhcccccccc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~ 155 (645)
..+||+||||||+|+++|+.|+++|++|+|+|+.+.... . ..++.+.++++++|+++ |+++++...+... ..+
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~-~---~~~~~l~~~~~~~l~~~--g~~~~~~~~~~~~-~~~ 82 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRA-F---GAGIYLWHNGLRVLEGL--GALDDVLQGSHTP-PTY 82 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCC-C---SSEEEEEHHHHHHHHHT--TCHHHHHTTCBCC-SCE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCC-C---CceEEeCccHHHHHHHc--CCHHHHHhhCCCc-cce
Confidence 458999999999999999999999999999999754321 1 23678999999999999 7788876654321 111
Q ss_pred ccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcC--CceEEcCceEEEEEeeCCeEEEEEcCCcEEec
Q 006440 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAG 233 (645)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a 233 (645)
. +.+. +.....++.. +.+ .+.++|..|.+.|.+.+. ...++++++|++++. ++ .|++.+|++++|
T Consensus 83 ~-~~~~--g~~~~~~~~~------~~~-~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~-~v~~~~g~~~~a 149 (379)
T 3alj_A 83 E-TWMH--NKSVSKETFN------GLP-WRIMTRSHLHDALVNRARALGVDISVNSEAVAADP--VG-RLTLQTGEVLEA 149 (379)
T ss_dssp E-EEET--TEEEEEECGG------GCC-EEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET--TT-EEEETTSCEEEC
T ss_pred E-EEeC--CceeeeccCC------CCc-eEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC-EEEECCCCEEEc
Confidence 1 2222 3222222210 233 478999999999988763 235889999999987 34 788899989999
Q ss_pred cEEEEccCCchhhhhhhcCCCCCcccCeEEEEEEeccC----CCCccccceEE--EecCceEEEEeecCCCeEEEEEEEe
Q 006440 234 DLLIGADGIWSKVRKNLFGPQEAIYSGYTCYTGIADFV----PADIESVGYRV--FLGHKQYFVSSDVGAGKMQWYAFHK 307 (645)
Q Consensus 234 ~lvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (645)
|+||+|||.+|.+|+.+.......+.+..++.+..... +.......... +++++.+++.+|..++...|++...
T Consensus 150 d~vV~AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 229 (379)
T 3alj_A 150 DLIVGADGVGSKVRDSIGFKQDRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNFWPRVQRILYSPCNENELYLGLMAP 229 (379)
T ss_dssp SEEEECCCTTCHHHHHHCCCEEEEEEEEEEEEEEEECCHHHHCSSCTTSEEEEECCSSSCCEEEEEECSSSEEEEEEEEC
T ss_pred CEEEECCCccHHHHHHhcCCCCcCcCCcEEEEEEechhhccCCcCCcccccccceEECCCCEEEEEECCCCcEEEEEEec
Confidence 99999999999999998543344555555566554332 21111112222 4566777888899888888876654
Q ss_pred CCCCCCCCCcchHHHHHHHHcCCChhHH---HHHHcCCccceeecccccCCCCCcccCCcEEEEccccCcCCCCCcchhh
Q 006440 308 EPAGGVDGPEGKKERLLKIFEGWCDNVV---DLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGC 384 (645)
Q Consensus 308 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~rvvLvGDAAH~~~P~~GqG~n 384 (645)
... .. + +.+.+.+..|.+.+. +.+.......+..++++...+..+|..+||+|||||||.++|++|||+|
T Consensus 230 ~~~--~~-~----~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rv~lvGDAAh~~~P~~GqG~~ 302 (379)
T 3alj_A 230 AAD--PR-G----SSVPIDLEVWVEMFPFLEPCLIEAAKLKTARYDKYETTKLDSWTRGKVALVGDAAHAMCPALAQGAG 302 (379)
T ss_dssp TTC--TT-T----TCSSCCHHHHHHHCGGGHHHHHHHHTCTTCCEEEEEEEEESCSEETTEEECTHHHHCCCGGGSCHHH
T ss_pred CCC--CC-H----HHHHHHHhcCCchhccHHHHHhhCCccceEEecccccCCCCCcccCcEEEEEcccCCCCcchhhhHH
Confidence 311 10 1 111122222222111 3332221112233344443345689999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCChhhHHHHHHHHHHHhhhHHHHHHHHH
Q 006440 385 MAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLA 435 (645)
Q Consensus 385 ~al~Da~~La~~L~~~~~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s 435 (645)
+||+||..|+++|... .+...+|+.|+++|++++..++..+
T Consensus 303 ~ai~da~~La~~L~~~----------~~~~~~l~~Y~~~r~~~~~~~~~~s 343 (379)
T 3alj_A 303 CAMVNAFSLSQDLEEG----------SSVEDALVAWETRIRPITDRCQALS 343 (379)
T ss_dssp HHHHHHHHHHHHTTSS----------SCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccc----------cCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999998641 1347899999999999999887766
No 12
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=100.00 E-value=8.3e-35 Score=323.16 Aligned_cols=341 Identities=22% Similarity=0.275 Sum_probs=215.6
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhcccccccc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~ 155 (645)
.++||+||||||+|+++|+.|+++|++|+|+|+.+..... ..+..++++++++|+++ |+++++...+.......
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~----~~~~~l~~~~~~~l~~l--Gl~~~~~~~~~~~~~~~ 77 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPY----PRAAGQNPRTMELLRIG--GVADEVVRADDIRGTQG 77 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCC----CCSCCBCHHHHHHHHHT--TCHHHHHHSCCSSCTTS
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCC----CccceECHHHHHHHHHc--CCHHHHHhhCCCccccc
Confidence 4689999999999999999999999999999998654322 22567999999999999 78888887654322110
Q ss_pred cc---ccccCCCceee----eccCCCchhhcCCCe-EEeeCHHHHHHHHHHHcC--CceEEcCceEEEEEeeCC----eE
Q 006440 156 NG---LVDGISGSWYI----KFDTFTPAAEKGLPV-TRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGD----KV 221 (645)
Q Consensus 156 ~~---~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~----~v 221 (645)
.. ......+.... .++..........+. .+.++|..|++.|.+.+. ...++++++|++++.+++ ++
T Consensus 78 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v 157 (535)
T 3ihg_A 78 DFVIRLAESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGV 157 (535)
T ss_dssp CCEEEEESSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEE
T ss_pred ceeeeEEeccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccE
Confidence 00 11111222222 111000000111121 568999999999988763 245899999999999988 99
Q ss_pred EEEEcCC---cEEeccEEEEccCCchhhhhhh-cCCCCCcccCeEEEEEEeccCCCCc-cc-cceEEEecCceEEEEeec
Q 006440 222 SVVLENG---QCYAGDLLIGADGIWSKVRKNL-FGPQEAIYSGYTCYTGIADFVPADI-ES-VGYRVFLGHKQYFVSSDV 295 (645)
Q Consensus 222 ~v~~~~g---~~i~a~lvVgADG~~S~vR~~l-~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~ 295 (645)
++++.++ .+++||+||+|||.+|.||+.+ +......+.+......+....+... .. ..+..+..++...++++.
T Consensus 158 ~v~~~~~~~~~~i~a~~vV~AdG~~S~vR~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~ 237 (535)
T 3ihg_A 158 TARLAGPDGEYDLRAGYLVGADGNRSLVRESLGIGRYGHGTLTHMVGVIFDADLSGIMEPGTTGWYYLHHPEFKGTFGPT 237 (535)
T ss_dssp EEEEEETTEEEEEEEEEEEECCCTTCHHHHHTTCCEEEEEEEEEEEEEEEECCGGGTSCTTCCEEEEEECSSCEEEEEEC
T ss_pred EEEEEcCCCeEEEEeCEEEECCCCcchHHHHcCCCcCCCCccceEEEEEEeccChhhccCCceEEEEEECCCceEEEEEe
Confidence 9998876 7899999999999999999998 3333333332221111111111111 11 122334455555555566
Q ss_pred CC-CeEEEEEEEeCCCCCCCCCcchHHHHHH----HHcCCChhHHHHHHcCCccceeecccccCCCCCcccCCcEEEEcc
Q 006440 296 GA-GKMQWYAFHKEPAGGVDGPEGKKERLLK----IFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGD 370 (645)
Q Consensus 296 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rvvLvGD 370 (645)
.+ ..+.+.+... +...........+.+.+ .+...... ........|.+.. ....+|..|||+|+||
T Consensus 238 ~~~~~~~~~~~~~-~~~~~~~~~~~~e~~~~~l~~~~~~~~~~-------~~~~~~~~~~~~~-~~a~~~~~grv~LvGD 308 (535)
T 3ihg_A 238 DRPDRHTLFVEYD-PDEGERPEDFTPQRCVELIGLALDAPEVK-------PELVDIQGWEMAA-RIAERWREGRVFLAGD 308 (535)
T ss_dssp SSTTEEEEEEEEC-TTTTCCGGGCCHHHHHHHHHHHHTCSSCC-------CEEEEEEEEEEEE-EEESCSEETTEEECTT
T ss_pred cCCCEEEEEEeeC-ccccCccccCCHHHHHHHHHHHhCCCCCc-------eeEEEeeEeeeeE-EEECccccCCEEEEec
Confidence 55 3333333222 21111111112223322 22211000 0011112222222 2356889999999999
Q ss_pred ccCcCCCCCcchhhHHHHHHHHHHHHHHHHhhccCCCCChhhHHHHHHHHHHHhhhHHHHHHHHHHHH
Q 006440 371 SVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSA 438 (645)
Q Consensus 371 AAH~~~P~~GqG~n~al~Da~~La~~L~~~~~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~~ 438 (645)
|||.++|++|||+|+||+||.+|+|+|+..+++. ..+.+|++|+++|++++..+++.+...
T Consensus 309 AAH~~~P~~GqG~n~ai~DA~~La~~La~~l~g~-------~~~~lL~~Ye~eR~p~a~~~~~~s~~~ 369 (535)
T 3ihg_A 309 AAKVTPPTGGMSGNAAVADGFDLAWKLAAVLQGQ-------AGAGLLDTYEDERKVAAELVVAEALAI 369 (535)
T ss_dssp TTEECCSTTSCHHHHHHHHHHHHHHHHHHHHTTS-------SCTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCccCCccccccccHHHHHHHHHHHhcCC-------CcHHHHHhhHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999987642 225789999999999999988887643
No 13
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=100.00 E-value=2.1e-34 Score=319.98 Aligned_cols=338 Identities=17% Similarity=0.161 Sum_probs=214.8
Q ss_pred CCcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccc
Q 006440 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (645)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~ 154 (645)
+..+||+||||||+|+++|+.|+++|++|+|+|+.+.... ...+..++++++++|+++ |+++++...+......
T Consensus 24 ~~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~----~~~~~~l~~~~~~~l~~l--Gl~~~~~~~~~~~~~~ 97 (549)
T 2r0c_A 24 PIETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTIT----HPRVGTIGPRSMELFRRW--GVAKQIRTAGWPGDHP 97 (549)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCS----SCCCCEECHHHHHHHHHT--TCHHHHHTSSCCTTSB
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC----CCceeeeCHHHHHHHHHc--CChHHHHhhcCCcccc
Confidence 3468999999999999999999999999999999864322 122577999999999999 7888887665432110
Q ss_pred c-ccccccCCCceeeeccCCCchh--h--cCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeCCeEEEEEcC--
Q 006440 155 I-NGLVDGISGSWYIKFDTFTPAA--E--KGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLEN-- 227 (645)
Q Consensus 155 ~-~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~-- 227 (645)
. ..+.....+.....++...... . ......+.++|..|++.|.+.+... ++++++|++++++++++++++.+
T Consensus 98 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~-v~~~~~v~~~~~~~~~v~v~~~~~~ 176 (549)
T 2r0c_A 98 LDAAWVTRVGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER-LRTRSRLDSFEQRDDHVRATITDLR 176 (549)
T ss_dssp CCEEEESSBTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG-EECSEEEEEEEECSSCEEEEEEETT
T ss_pred cceEEeccCCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh-cccCcEEEEEEEeCCEEEEEEEECC
Confidence 0 0011111222222222111000 0 0111247899999999999988666 89999999999999999888875
Q ss_pred -C--cEEeccEEEEccCCchhhhhhhc-CCCCCcccCeEEEEEEeccCCC----CccccceEEEecCc-eEEEEeecCCC
Q 006440 228 -G--QCYAGDLLIGADGIWSKVRKNLF-GPQEAIYSGYTCYTGIADFVPA----DIESVGYRVFLGHK-QYFVSSDVGAG 298 (645)
Q Consensus 228 -g--~~i~a~lvVgADG~~S~vR~~l~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~ 298 (645)
| ++++||+||+|||.+|.||+.+. ......+.+. .+......... ......+.++..++ ..+++++..+.
T Consensus 177 ~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~p~~~~ 255 (549)
T 2r0c_A 177 TGATRAVHARYLVACDGASSPTRKALGIDAPPRHRTQV-FRNILFRAPELRSLLGERAALFFFLMLSSSLRFPLRALDGR 255 (549)
T ss_dssp TCCEEEEEEEEEEECCCTTCHHHHHHTCCCCBSSCCEE-EEEEEEECTTHHHHHGGGCCSEEEEEEETTEEEEEEESSSS
T ss_pred CCCEEEEEeCEEEECCCCCcHHHHHcCCCCCCCcccce-EEEEEEECCchHHhcCCCCceEEEEECCCCcEEEEEEECCC
Confidence 6 47999999999999999999983 3334444432 22222221100 00111223333444 45566666543
Q ss_pred eEEEEEEEeCCCCCCCCCcchHHHHHHHHcCCChhHHHHHHcCCccceeecccccCCCCCcccCCcEEEEccccCcCCCC
Q 006440 299 KMQWYAFHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPN 378 (645)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rvvLvGDAAH~~~P~ 378 (645)
. .|.+....+... ...+...+.+.+.+..-.+ ........|.+. .....+|..|||+|+|||||.++|+
T Consensus 256 ~-~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~--------~~~~~~~~~~~~-~~~a~~~~~grv~L~GDAAH~~~P~ 324 (549)
T 2r0c_A 256 G-LYRLTVGVDDAS-KSTMDSFELVRRAVAFDTE--------IEVLSDSEWHLT-HRVADSFSAGRVFLTGDAAHTLSPS 324 (549)
T ss_dssp S-EEEEEEECSTTC-CSCCCHHHHHHHHBCSCCC--------CEEEEEEEEEEC-CEECSCSEETTEEECGGGTEECCCG
T ss_pred c-EEEEEecCCCCC-CCHHHHHHHHHHHhCCCCc--------eeEEEEecchhH-hhhHHhhcCCcEEEEccccccCCCc
Confidence 2 233322222111 1222333334333332000 001111223322 2345688999999999999999999
Q ss_pred CcchhhHHHHHHHHHHHHHHHHhhccCCCCChhhHHHHHHHHHHHhhhHHHHHHHHHHHH
Q 006440 379 LGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSA 438 (645)
Q Consensus 379 ~GqG~n~al~Da~~La~~L~~~~~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~~ 438 (645)
+|||+|+||+||.+|+|+|+..+++. ..+.+|+.|+++|++++..++..++..
T Consensus 325 ~GqG~n~gi~DA~~La~~La~~l~g~-------a~~~lL~~Y~~eR~~~a~~~~~~s~~~ 377 (549)
T 2r0c_A 325 GGFGMNTGIGSAADLGWKLAATLRGW-------AGPGLLATYEEERRPVAITSLEEANVN 377 (549)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHTC-------SCTTTTHHHHHHHHHHHHHHHHC----
T ss_pred cCCccccccHHHHHHHHHHHHHHcCC-------CCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999987642 124789999999999999988877643
No 14
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=100.00 E-value=3.4e-35 Score=313.87 Aligned_cols=373 Identities=14% Similarity=0.152 Sum_probs=226.5
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCcc--ccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSA--IRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~--~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~ 154 (645)
++||+||||||+|+++|+.|+++|++|+|+|+.+.+ ....+ ...+.++++++|+++ |+++.+...+... ..
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~----~g~l~~~~~~~l~~l--g~~~~~~~~~~~~-~~ 74 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIR----AGVLEQGMVDLLREA--GVDRRMARDGLVH-EG 74 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCC----CCEECHHHHHHHHHT--TCCHHHHHHCEEE-SC
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCc----eEeECHHHHHHHHHc--CCcHHHHhcCCcc-ce
Confidence 479999999999999999999999999999997642 11122 224889999999999 7778776654321 11
Q ss_pred cccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcC--CceEEcCceEEEEEeeC-CeEEEEE-cCCc-
Q 006440 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHG-DKVSVVL-ENGQ- 229 (645)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~-~~v~v~~-~~g~- 229 (645)
+. +... +. ...++. ....+....+.+++..+.+.|.+.+. ...++++++|++++.++ +.+.|++ .+|+
T Consensus 75 ~~-~~~~--~~-~~~~~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~ 147 (394)
T 1k0i_A 75 VE-IAFA--GQ-RRRIDL---KRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGER 147 (394)
T ss_dssp EE-EEET--TE-EEEECH---HHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEE
T ss_pred EE-EEEC--Cc-eEEecc---ccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcE
Confidence 11 1111 11 111111 11111223577899999998887652 23588999999998764 5678888 7887
Q ss_pred -EEeccEEEEccCCchhhhhhhcCCCCCcccCe--EEEEEEeccCCCCccccceEEEecCceEEEEeecCCCeEEEEEEE
Q 006440 230 -CYAGDLLIGADGIWSKVRKNLFGPQEAIYSGY--TCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFH 306 (645)
Q Consensus 230 -~i~a~lvVgADG~~S~vR~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (645)
+++||+||+|||.+|.+|+.+.......|... ..+.++....+.... .......++.+++.++..++...|++..
T Consensus 148 ~~~~a~~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 225 (394)
T 1k0i_A 148 LRLDCDYIAGCDGFHGISRQSIPAERLKVFERVYPFGWLGLLADTPPVSH--ELIYANHPRGFALCSQRSATRSQYYVQV 225 (394)
T ss_dssp EEEECSEEEECCCTTCSTGGGSCGGGCEEEEEEEEEEEEEEEESSCCSCS--SCEEECCTTCCEEEEEEETTEEEEEEEE
T ss_pred EEEEeCEEEECCCCCcHHHHhcCccccccccccccceeEEEecCCCCCcc--ceEEEEcCCceEEEEecCCCcEEEEEEe
Confidence 79999999999999999998843222333322 233443322222111 1222233444555555455566666654
Q ss_pred eCCCCCCCCCcchHHHHHHHH-cCCChhHHHHHHcCCccceeecccccCCCCCcccCCcEEEEccccCcCCCCCcchhhH
Q 006440 307 KEPAGGVDGPEGKKERLLKIF-EGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCM 385 (645)
Q Consensus 307 ~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rvvLvGDAAH~~~P~~GqG~n~ 385 (645)
..... . .....+.+.+.+ ..+.......+..........+++.. ....+|..+||+|+|||||.++|++|||+|+
T Consensus 226 ~~~~~-~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~grv~LvGDAAh~~~P~~GqG~~~ 301 (394)
T 1k0i_A 226 PLSEK-V--EDWSDERFWTELKARLPSEVAEKLVTGPSLEKSIAPLRS-FVVEPMQHGRLFLAGDAAHIVPPTGAKGLNL 301 (394)
T ss_dssp CTTCC-G--GGCCHHHHHHHHHHTSCHHHHHHCCCCCEEEEEEEEEEE-EEEECSEETTEEECGGGTEECCGGGTCHHHH
T ss_pred CCCCC-c--cccCHHHHHHHHHHhhCcccccccccCcceeeEEEEhhh-hhccccccCCEEEEechhhcCCCcccchHHH
Confidence 32211 0 111112222222 22222221111111110001111111 1234688899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCChhhHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhHhhhhhccCCCccchhhhcccC
Q 006440 386 AIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAAVMASTYKAYLGVGLGPLSFLTKFRIP 465 (645)
Q Consensus 386 al~Da~~La~~L~~~~~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~ 465 (645)
||+||..|+++|....+.. .+.+|+.|+++|++++..++.+++....+.. .+.....+.+.+|+..|.
T Consensus 302 ai~da~~La~~L~~~~~~~--------~~~~L~~Y~~~r~~~~~~~~~~s~~~~~~~~----~~~~~~~~~~~~r~~~l~ 369 (394)
T 1k0i_A 302 AASDVSTLYRLLLKAYREG--------RGELLERYSAICLRRIWKAERFSWWMTSVLH----RFPDTDAFSQRIQQTELE 369 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHC--------CGGGGGGHHHHHHHHHHHHHHHHHHHHHHHS----CCTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccC--------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----cCCCCChHHHHHHHHHHH
Confidence 9999999999999876431 2468999999999999988877765433321 223334556667776665
Q ss_pred CCCccc--ceeeeeccch
Q 006440 466 HPGRVG--GRFFIDLAMP 481 (645)
Q Consensus 466 ~~~~~~--~~~~~~~~~~ 481 (645)
.....+ ++.+++.++|
T Consensus 370 ~~~~~~~~~~~~~~~~~g 387 (394)
T 1k0i_A 370 YYLGSEAGLATIAENYVG 387 (394)
T ss_dssp HHHHCHHHHHHHHHHHSC
T ss_pred hhcCCHHHHHHHHHHhcC
Confidence 544443 3555555444
No 15
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=100.00 E-value=1.8e-33 Score=317.69 Aligned_cols=336 Identities=15% Similarity=0.214 Sum_probs=209.4
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHH-CCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKR-KGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~-~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~ 154 (645)
..+||+||||||+|+++|+.|++ +|++|+|+|+.+.+.. . ..++.++++++++|+++ |+++++...+.... .
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~-~---g~a~~l~~~t~e~l~~l--Gl~~~~~~~~~~~~-~ 103 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPME-L---GQADGIACRTMEMFEAF--EFADSILKEACWIN-D 103 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCS-S---CSCCEECHHHHHHHHHT--TCHHHHHHHSEEEC-E
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCC-C---CceeeeCHHHHHHHHHc--CcHHHHHHhccccc-c
Confidence 46899999999999999999999 9999999999864322 1 23578999999999999 78888876543221 1
Q ss_pred cccccccC---CCceee--eccCCCchhhcCCCeEEeeCHHHHHHHHHHHc---C-CceEEcCceEEEEEeeCC----eE
Q 006440 155 INGLVDGI---SGSWYI--KFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---G-DEIILNESNVIDFKDHGD----KV 221 (645)
Q Consensus 155 ~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~-~~~i~~~~~v~~i~~~~~----~v 221 (645)
+. ++... .+.... .++.. ......+..+.++|..|++.|.+.+ + ...++++++|++++.+++ ++
T Consensus 104 ~~-~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v 180 (639)
T 2dkh_A 104 VT-FWKPDPGQPGRIARHGRVQDT--EDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPV 180 (639)
T ss_dssp EE-EEEECTTSTTCEEEEEEEESS--CTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCE
T ss_pred eE-EECCCCCCCcceEeecccCcc--cCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCE
Confidence 11 12211 121110 11110 0111122356899999999998876 3 225888999999998763 58
Q ss_pred EEEEc------CC--cEEeccEEEEccCCchhhhhhhcC-CCCCcccCeEEEEEEecc-CCCCccccceEEEecCceEEE
Q 006440 222 SVVLE------NG--QCYAGDLLIGADGIWSKVRKNLFG-PQEAIYSGYTCYTGIADF-VPADIESVGYRVFLGHKQYFV 291 (645)
Q Consensus 222 ~v~~~------~g--~~i~a~lvVgADG~~S~vR~~l~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 291 (645)
+|+++ +| ++++||+||+|||.+|.||+.+.. .....+.....+..+... ..++.. ....+.. +..+++
T Consensus 181 ~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~-~~g~~~ 258 (639)
T 2dkh_A 181 TVTLERCDAAHAGQIETVQARYVVGCDGARSNVRRAIGRQLVGDSANQAWGVMDVLAVTDFPDVR-YKVAIQS-EQGNVL 258 (639)
T ss_dssp EEEEEECSGGGTTCEEEEEEEEEEECCCTTCHHHHHTTCCCEECSCSCCEEEEEEEEEECCTTTT-SEEEEEE-TTEEEE
T ss_pred EEEEEeccccCCCCeEEEEeCEEEECCCcchHHHHHhCCCCCCCCccceEEEEEEEEccCCCccc-eeEEEEc-CCceEE
Confidence 88775 45 579999999999999999999842 222233322222211110 001111 1112223 455666
Q ss_pred EeecCCC-eEEEEEEEeC--CCCCCCCCcchHHHHHHHHcCCChhHHHHHHcCC--ccceeecccccC--CCCCccc---
Q 006440 292 SSDVGAG-KMQWYAFHKE--PAGGVDGPEGKKERLLKIFEGWCDNVVDLILATD--EEAILRRDIYDR--TPIFTWG--- 361 (645)
Q Consensus 292 ~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~--~~~~~~~--- 361 (645)
.+|..++ .++|++.... ............+.+.+.+. +.+.... ...+..+..+.. ....+|.
T Consensus 259 ~~P~~~~~~~r~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 331 (639)
T 2dkh_A 259 IIPREGGHLVRFYVEMDKLDADERVASRNITVEQLIATAQ-------RVLHPYKLEVKNVPWWSVYEIGQRICAKYDDVV 331 (639)
T ss_dssp EEECTTSSCEEEEEECC-----------CCCHHHHHHHHH-------HHHTTSCEEEEEEEEEEEECCCCEECSCSBSCC
T ss_pred EEEcCCCcEEEEEEECCCcCcccccccCCCCHHHHHHHHH-------HHhCcccCcceeeeEEEecccccchhhhhhccc
Confidence 7777776 5555554332 11000111122333333221 1111100 011122222221 2244666
Q ss_pred ---------CCcEEEEccccCcCCCCCcchhhHHHHHHHHHHHHHHHHhhccCCCCChhhHHHHHHHHHHHhhhHHHHHH
Q 006440 362 ---------RGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIH 432 (645)
Q Consensus 362 ---------~~rvvLvGDAAH~~~P~~GqG~n~al~Da~~La~~L~~~~~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~ 432 (645)
.|||+|+|||||.++|++|||+|+||+||.+|+|+|+.++++. ..+.+|+.|+++|++++..++
T Consensus 332 ~~~~~~~~~~gRV~L~GDAAH~~~P~~GqG~n~ai~DA~nLawkLa~vl~g~-------a~~~lL~~Ye~eR~~~a~~~~ 404 (639)
T 2dkh_A 332 DAVATPDSPLPRVFIAGDACHTHSPKAGQGMNFSMQDSFNLGWKLAAVLRKQ-------CAPELLHTYSSERQVVAQQLI 404 (639)
T ss_dssp CSSCCTTSCCCCEEECGGGTEECCGGGCCTTHHHHHHHHHHHHHHHHHHTTS-------BCGGGGHHHHHHHHHHHHHHH
T ss_pred cccccccCccCcEEEEecccccCCCcccccchhhHHHHHHHHHHHHHHHcCC-------CcHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999987642 225789999999999999887
Q ss_pred HHHHH
Q 006440 433 GLARS 437 (645)
Q Consensus 433 ~~s~~ 437 (645)
.+++.
T Consensus 405 ~~s~~ 409 (639)
T 2dkh_A 405 DFDRE 409 (639)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76653
No 16
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=100.00 E-value=1e-31 Score=298.83 Aligned_cols=349 Identities=14% Similarity=0.185 Sum_probs=226.1
Q ss_pred CCCcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhcccccc
Q 006440 74 ENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGD 153 (645)
Q Consensus 74 ~~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~ 153 (645)
+|..+||+||||||+|+++|+.|+++|++|+|+|+.+.+.... +..+.+.+..+|+.+ |+++.+.........
T Consensus 20 ~M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~-----G~~l~p~~~~~l~~l--Gl~~~l~~~~~~~~~ 92 (591)
T 3i3l_A 20 HMTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRV-----GESLLPGTMSILNRL--GLQEKIDAQNYVKKP 92 (591)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCC-----CCBCCHHHHHHHHHT--TCHHHHHHHCCEEEC
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCce-----eeeECHHHHHHHHHc--CCcHHHHhcCCcccC
Confidence 3557899999999999999999999999999999985433222 356889999999999 788887766543222
Q ss_pred ccccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcC--CceEEcCceEEEEEee-CCeEEEEEc-CC-
Q 006440 154 RINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDH-GDKVSVVLE-NG- 228 (645)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~-~~~v~v~~~-~g- 228 (645)
.....+..........+.... ......+..+.++|..|.+.|.+.+. ...++++++|+++..+ ++.+.|++. +|
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~ 171 (591)
T 3i3l_A 93 SATFLWGQDQAPWTFSFAAPK-VAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGE 171 (591)
T ss_dssp EEEEECSSSCCCEEEECCCC---CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTE
T ss_pred CcEEEecCCCccceeeccccc-ccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCc
Confidence 211111111111112222111 11123456789999999999988762 3458899999999875 566778887 67
Q ss_pred -cEEeccEEEEccCCchhhhhhhcCCC-CCcccCeEEEEEEecc--CCCCccccceEEEecCceEEEEeecCCCeEEEEE
Q 006440 229 -QCYAGDLLIGADGIWSKVRKNLFGPQ-EAIYSGYTCYTGIADF--VPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYA 304 (645)
Q Consensus 229 -~~i~a~lvVgADG~~S~vR~~l~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (645)
.+++||+||+|||.+|.+|+.+.... ...+.+...+..+... .+.+.....+ ....+.++++.+|..++.+.+.+
T Consensus 172 ~~~i~AdlVV~AdG~~S~lr~~lg~~~~~~~~~~~av~~~~~~~~~~~~~~~~~~~-~~~~~~G~~w~iPl~~~~~sv~~ 250 (591)
T 3i3l_A 172 SVTVESDFVIDAGGSGGPISRKLGVRQYDEFYRNFAVWSYFKLKDPFEGDLKGTTY-SITFEDGWVWMIPIKDDLYSVGL 250 (591)
T ss_dssp EEEEEESEEEECCGGGCHHHHHHTCEEEEEEEEEEEEEEEEECCCSCCSTTTTCEE-EEEETTEEEEEEECSSSEEEEEE
T ss_pred eEEEEcCEEEECCCCcchhHHHcCCCCCCccccceEEEEEEecCccccCCCCCceE-EEEcCCcEEEEEECCCCeEEEEE
Confidence 57999999999999999999883322 1222222222212111 1112222222 23345567777888877666555
Q ss_pred EEeCCCCCCCCCcchHHHHHHHHcCCChhHHHHHHcCCccc-eeecccccCCCCCcccCCcEEEEccccCcCCCCCcchh
Q 006440 305 FHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEA-ILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGG 383 (645)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~rvvLvGDAAH~~~P~~GqG~ 383 (645)
........ .......+.+.+.+..+.+.+.+.+....... ........ ....+|..+|++|||||||.++|+.|||+
T Consensus 251 ~~~~~~~~-~l~~~~~~~~~~~l~~~~p~l~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~rvvLIGDAAh~~~Pl~GqGi 328 (591)
T 3i3l_A 251 VVDRSKSA-EVREQGADAFYSSTLAKCAKAMDILGGAEQVDEVRIVQDWS-YDTEVFSADRFFLCGDAACFTDPLFSQGV 328 (591)
T ss_dssp EEEGGGHH-HHHHHCHHHHHHHHHTTCHHHHHHHTTCEECSCCEEEEEEE-EEESCSEETTEEECGGGTCBCCGGGCCHH
T ss_pred EcCHHHHh-hhccCCHHHHHHHHHHhCHHHHHHHhcCccccCceEecccc-cchhhcccCCEEEEccccccCCCcccccH
Confidence 44321100 00001124455555566676666654322110 10001111 12346788999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhccCCCCChhhHHHHHHHHHHHhhhHHHHHHHHHHHHH
Q 006440 384 CMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAA 439 (645)
Q Consensus 384 n~al~Da~~La~~L~~~~~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~~~ 439 (645)
|+|++||..|+++|...+.. ......+++.|++.|+++...+.++.+...
T Consensus 329 nlAl~dA~~LA~~L~~~l~~------~~~~~~al~~Y~~~~~~~~~~i~~~~~~~Y 378 (591)
T 3i3l_A 329 HLASQSAVSAAAAIDRITRH------GDEKDAVHAWYNRTYREAYEQYHQFLASFY 378 (591)
T ss_dssp HHHHHHHHHHHHHHHHHHHC------GGGHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhC------CchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988753 334578999999999999988877776543
No 17
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=100.00 E-value=1.7e-31 Score=294.59 Aligned_cols=343 Identities=14% Similarity=0.166 Sum_probs=219.7
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHH-HHHhcChhHHHHHHHhccccccc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALA-ALEAIDLDVAEEVMRAGCVTGDR 154 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~-~l~~l~~g~~~~~~~~~~~~~~~ 154 (645)
.++||+||||||+|+++|+.|+++|++|+|+|+.+.+.... +..+.+.... +++.+ |+++.+..........
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~-----g~~~~~~~~~~~l~~l--gl~~~~~~~~~~~~~~ 78 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQI-----GESLLPATVHGICAML--GLTDEMKRAGFPIKRG 78 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCS-----CCBCCHHHHTTHHHHT--TCHHHHHTTTCCEECE
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCC-----CcccCcchHHHHHHHh--CcHHHHHHcCCccccC
Confidence 45899999999999999999999999999999986433222 2345666554 88888 7788776654322211
Q ss_pred cccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcC--CceEEcCceEEEEEeeCCeE---EEEEcCCc
Q 006440 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKV---SVVLENGQ 229 (645)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v---~v~~~~g~ 229 (645)
....+......+...+.... ....+..+.++|..|.+.|.+.+. ...++++++|+++..+++.+ .+...+|+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~ 155 (512)
T 3e1t_A 79 GTFRWGKEPEPWTFGFTRHP---DDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGV 155 (512)
T ss_dssp EEEECSSCSSCEEEESSSSS---SSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSC
T ss_pred ceEEecCCccccccccccCC---CCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCC
Confidence 11011111111222222111 122345788999999999988762 34588999999999988754 45555674
Q ss_pred --EEeccEEEEccCCchhhhhhhcCCCCCcccCeEEEEEEecc---CCCCccccceEEEecCceEEEEeecCCCeEEEEE
Q 006440 230 --CYAGDLLIGADGIWSKVRKNLFGPQEAIYSGYTCYTGIADF---VPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYA 304 (645)
Q Consensus 230 --~i~a~lvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (645)
+++||+||+|||.+|.+|+.+.......+....++.++... .+.+.....+..+. +..+++.+|..++...+.+
T Consensus 156 ~~~i~ad~VI~AdG~~S~vr~~lg~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~-~~G~~~~~Pl~~~~~~vg~ 234 (512)
T 3e1t_A 156 ELMAHARFIVDASGNRTRVSQAVGERVYSRFFQNVALYGYFENGKRLPAPRQGNILSAAF-QDGWFWYIPLSDTLTSVGA 234 (512)
T ss_dssp EEEEEEEEEEECCCTTCSSGGGTCCEEECSTTCEEEEEEEEESCCCCSTTCTTSEEEEEE-TTEEEEEEECSSSEEEEEE
T ss_pred EEEEEcCEEEECCCcchHHHHHcCCCccCchhcceEEEEEecCCccCCCCCcCceEEEEe-CCceEEEEEeCCCeEEEEE
Confidence 79999999999999999999832112222233444444321 12222222233333 4557778888887766655
Q ss_pred EEeCCCCCCCCCcchHHHHHHHHcCCChhHHHHHHcCCccce---eeccccc--CCCCCcccCCcEEEEccccCcCCCCC
Q 006440 305 FHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAI---LRRDIYD--RTPIFTWGRGRVTLLGDSVHAMQPNL 379 (645)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~--~~~~~~~~~~rvvLvGDAAH~~~P~~ 379 (645)
......... .... .++.+..+..+.+.+.+.+........ ....+.. .....+|..+|++|||||||.++|+.
T Consensus 235 ~~~~~~~~~-~~~~-~~~~~~~~l~~~p~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~vvlvGDAAh~~~P~~ 312 (512)
T 3e1t_A 235 VVSREAAEA-IKDG-HEAALLRYIDRCPIIKEYLAPATRVTTGDYGEIRIRKDYSYCNTSFWKNGMALVGDAACFVDPVF 312 (512)
T ss_dssp EEEHHHHTT-TSSC-HHHHHHHHHHTSHHHHHHHTTCEECCSSTTSSCEEEESCCEEESCSBCSSEEECGGGTEECCSTT
T ss_pred EecHHHhhh-hcCC-HHHHHHHHHHhCchHHHHHhcCccccccccccceeeccccccccccccCCEEEEechhhcCCCcc
Confidence 543221110 0111 233333343466777666654321100 0000000 01234677899999999999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHhhccCCCCChhhHHHHHHHHHHHhhhHHHHHHHHHHH
Q 006440 380 GQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARS 437 (645)
Q Consensus 380 GqG~n~al~Da~~La~~L~~~~~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~ 437 (645)
|||+|+|++||..|++.|...+.+ +.+...+|+.|+++|+++...+.++...
T Consensus 313 GqG~~~Al~dA~~La~~L~~~l~~------~~~~~~aL~~Ye~~~~~~~~~~~~~~~~ 364 (512)
T 3e1t_A 313 SSGVHLATYSALLVARAINTCLAG------EMSEQRCFEEFERRYRREYGNFYQFLVA 364 (512)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTT------CSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHHHHHcC------CccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999987653 2356789999999999998877766654
No 18
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=100.00 E-value=5e-31 Score=281.08 Aligned_cols=327 Identities=16% Similarity=0.111 Sum_probs=191.2
Q ss_pred CCcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccc
Q 006440 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (645)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~ 154 (645)
|++|||+||||||+|+++|+.|+++|++|+|+||++...... .+ +-.+.+. +|+.++ +......... ....
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~-~~--g~~l~~~---~l~~l~--~~~~~~~~~~-~~~~ 72 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPV-RC--GEGLSKG---ILNEAD--IKADRSFIAN-EVKG 72 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSC-CS--CCEEETH---HHHHTT--CCCCTTTEEE-EESE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCC-ce--ecccCHH---HHHHcC--CCchhhhhhc-ccce
Confidence 456999999999999999999999999999999975432211 11 1234443 455552 2111000000 0000
Q ss_pred cccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcC--CceEEcCceEEEEEeeCCeEEEEE--cCC--
Q 006440 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVL--ENG-- 228 (645)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~v~~--~~g-- 228 (645)
.. +.. ..+.....+. ....+...+++++|..|++.|.+.+. ...++++++|+++..+++.+.... .++
T Consensus 73 ~~-~~~-~~~~~~~~~~----~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~ 146 (397)
T 3oz2_A 73 AR-IYG-PSEKRPIILQ----SEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEI 146 (397)
T ss_dssp EE-EEC-TTCSSCEEEE----CSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEE
T ss_pred EE-EEe-CCCceEeecc----ccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecccccc
Confidence 00 111 1111111111 11123345789999999999988752 234888999999998888765332 233
Q ss_pred cEEeccEEEEccCCchhhhhhhcC-CCCCcccCeEEEEEEeccCCCCccccceEEEe---cCceEEEEeecCCCeEEEEE
Q 006440 229 QCYAGDLLIGADGIWSKVRKNLFG-PQEAIYSGYTCYTGIADFVPADIESVGYRVFL---GHKQYFVSSDVGAGKMQWYA 304 (645)
Q Consensus 229 ~~i~a~lvVgADG~~S~vR~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 304 (645)
.+++||+||+|||.+|.||+.+.. .....+........+. ....+.+.....++. .++.+.+.++..++.....+
T Consensus 147 ~~~~a~~vIgAdG~~S~vr~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~vg~ 225 (397)
T 3oz2_A 147 VDVRAKMVIAADGFESEFGRWAGLKSVILARNDIISALQYR-MINVDVDPDYTDFYLGSIAPAGYIWVFPKGEGMANVGI 225 (397)
T ss_dssp EEEEEEEEEECCCTTCHHHHHHTCGGGCCCGGGEEEEEEEE-EESCCCCTTEEEEECSTTSTTEEEEEEEEETTEEEEEE
T ss_pred eEEEEeEEEeCCccccHHHHHcCCCcccccceeeeeeEEEE-eeccccCcccceeeeeccCCCceEEEeecccceeEEEE
Confidence 368999999999999999999832 2222333322222211 111222222223333 24556667777666654443
Q ss_pred EEeCCCCCCCCCcchHHHHHHHHcCCChhHHHHHHcCCccceeecccccCCCCCcccCCcEEEEccccCcCCCCCcchhh
Q 006440 305 FHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGC 384 (645)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rvvLvGDAAH~~~P~~GqG~n 384 (645)
....... . .......+++.+....+.+ ............+........|..+|++|+|||||.++|++|||+|
T Consensus 226 ~~~~~~~--~-~~~~~~~~l~~~~~~~~~l----~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~G~Gi~ 298 (397)
T 3oz2_A 226 GSSINWI--H-NRFELKNYLDRFIENHPGL----KKGQDIQLVTGGVSVSKVKMPITMPGLMLVGDAARLIDPITGGGIA 298 (397)
T ss_dssp EEETTTS--C-SHHHHHHHHHHHHHTCHHH----HTSEEEEEEEEEEECCCCCSCCEETTEEECGGGGTCSCTTTCCCHH
T ss_pred eeccchh--h-hhhhHHHHHHHHHHhCccc----cccceeeeeeccccccCcccceeeeeEEEcccccccCCCCcchhHH
Confidence 3322211 1 1112222222222222221 1222222222223323334567889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCChhhHHHHHHHHHHHhhhHHHH
Q 006440 385 MAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAV 430 (645)
Q Consensus 385 ~al~Da~~La~~L~~~~~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~ 430 (645)
+||+||..||+.|.++++.+ +..+++|+.|++.++.+...
T Consensus 299 ~A~~~g~~~A~~i~~~l~~~------~~~~~~L~~Ye~~~~~~~~~ 338 (397)
T 3oz2_A 299 NAIVSGMYAAQVTKEAIESN------DYSPQMMQKYEKLIKERFER 338 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHT------CCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcC------CccHHHHHHHHHHHHHHHHH
Confidence 99999999999999988752 23468999999998877543
No 19
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=99.97 E-value=4.4e-32 Score=288.30 Aligned_cols=338 Identities=19% Similarity=0.176 Sum_probs=201.6
Q ss_pred CcEEEEcCCHHHHHHHHHHHHC--CCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHH-HH-HHHhcccccc
Q 006440 78 LRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVA-EE-VMRAGCVTGD 153 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~--g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~-~~-~~~~~~~~~~ 153 (645)
.||+||||||+|+++|+.|+++ |++|+|+|+.+... ..| .++.+++++++ ..++.+++ +. +..... ...
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~-~~g---~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~ 73 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQE-VLG---WGVVLPGRPGQ--HPANPLSYLDAPERLNPQ-FLE 73 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTC-CCC---SEEEEESCTTT--CTTCGGGGSSCGGGGCCE-EEC
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCC-cce---eEEEeCcHHHH--hhcCcchhhhhhHHHhhc-ccc
Confidence 4899999999999999999999 99999999975432 222 35677777665 22222333 22 211110 000
Q ss_pred ccccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcC--CceEEcCceEEEEEeeCCeEEEEEcCCcEE
Q 006440 154 RINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCY 231 (645)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i 231 (645)
.+. +.. .+... . ...+.+ .+.++|..|.+.|.+.+. ...++++++|++++.. .++
T Consensus 74 ~~~-~~~--~g~~~-~-------~~~~~~-~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-----------~~~ 130 (381)
T 3c4a_A 74 DFK-LVH--HNEPS-L-------MSTGVL-LCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL-----------PLA 130 (381)
T ss_dssp CEE-EEE--SSSEE-E-------CCCCSC-EEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC-----------CGG
T ss_pred ceE-EEe--CCeeE-E-------ecCCCc-eeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc-----------ccc
Confidence 110 111 11111 0 111333 358999999999988763 2358899999887542 136
Q ss_pred eccEEEEccCCchhhhhhhc---CCCCCcccCeEEEEEEeccCCCCccccceEEEecCceEE-EEeecCCCeEEEEEEEe
Q 006440 232 AGDLLIGADGIWSKVRKNLF---GPQEAIYSGYTCYTGIADFVPADIESVGYRVFLGHKQYF-VSSDVGAGKMQWYAFHK 307 (645)
Q Consensus 232 ~a~lvVgADG~~S~vR~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 307 (645)
+||+||+|||.+|. |+.+. +.....+....+|.++.... + ....+..+.+.+..+ ..+|..++...+.+...
T Consensus 131 ~ad~vV~AdG~~S~-R~~l~~~~g~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~ 206 (381)
T 3c4a_A 131 DYDLVVLANGVNHK-TAHFTEALVPQVDYGRNKYIWYGTSQLF--D-QMNLVFRTHGKDIFIAHAYKYSDTMSTFIVECS 206 (381)
T ss_dssp GCSEEEECCGGGGG-TCCSSGGGCCCCEEEEEEEEEEEESSCC--S-SEEEEEEEETTEEEEEEEEECSSSCEEEEEEEC
T ss_pred cCCEEEECCCCCch-HHhhhhhcCCCcccCCccEEEEecCCCC--C-cceeeEeeCCCcEEEEEEEEecCCeEEEEEECC
Confidence 89999999999999 99872 22222222334555443211 1 101111123444332 35777666654433321
Q ss_pred CCC---CCCC--CCcchHHHHHHHHcCCChhHHHHHHcCCccceeecccccCCCCCcccCCcEEEEccccCcCCCCCcch
Q 006440 308 EPA---GGVD--GPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQG 382 (645)
Q Consensus 308 ~~~---~~~~--~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rvvLvGDAAH~~~P~~GqG 382 (645)
... .... ..+...+.+.+.|..|.+.. +.+. ... ..+.++...+..+|..+||+|||||||.++|++|||
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~l~~---~~~-~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG 281 (381)
T 3c4a_A 207 EETYARARLGEMSEEASAEYVAKVFQAELGGH-GLVS---QPG-LGWRNFMTLSHDRCHDGKLVLLGDALQSGHFSIGHG 281 (381)
T ss_dssp HHHHHHTTSSSSCHHHHHHHHHHHTHHHHTTC-CCBC---CTT-TCSEEEEECCCSCSEETTEEECGGGTCCCCGGGCCH
T ss_pred ccccccCCcccCChHHHHHHHHHHhcccCCCc-hhhc---CCC-cceeeeccccCCCcccCCEEEEEccccccCCCcccc
Confidence 100 0110 11123344555554442221 1111 111 123444445567899999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhccCCCCChhhHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhHhhhhhccCCCccchhhhc
Q 006440 383 GCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAAVMASTYKAYLGVGLGPLSFLTKF 462 (645)
Q Consensus 383 ~n~al~Da~~La~~L~~~~~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~r~~ 462 (645)
+|+||+||.+|+++|... .+.+.+|+.|+++|++++..++..++....+......+|+ +.+....|++
T Consensus 282 ~~~al~Da~~La~~L~~~----------~~~~~aL~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~--~~~~~~~r~~ 349 (381)
T 3c4a_A 282 TTMAVVVAQLLVKALCTE----------DGVPAALKRFEERALPLVQLFRGHADNSRVWFETVEERMH--LSSAEFVQSF 349 (381)
T ss_dssp HHHHHHHHHHHHHHHHHS----------SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCC--------CHHHHG
T ss_pred HHHHHHHHHHHHHHHhcc----------ccHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhchhhhhc--CCHHHHHHHH
Confidence 999999999999999873 1357899999999999999998888765444332334444 3778888998
Q ss_pred ccCC
Q 006440 463 RIPH 466 (645)
Q Consensus 463 ~l~~ 466 (645)
.+..
T Consensus 350 ~~~~ 353 (381)
T 3c4a_A 350 DARR 353 (381)
T ss_dssp GGTT
T ss_pred hhcc
Confidence 8876
No 20
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.97 E-value=6.3e-31 Score=285.82 Aligned_cols=331 Identities=15% Similarity=0.100 Sum_probs=198.9
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhcccccccc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~ 155 (645)
.++||+||||||+|+++|+.|+++|++|+|+|+.+.+..+.... +..+ +.+.|+.++ +.+............+
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~--g~~l---~~~~l~~lg--~~~~~~~~~~~~~~~~ 77 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPC--GDAV---SKAHFDKLG--MPYPKGEELENKINGI 77 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCC--CCEE---EHHHHHHTT--CCCCCGGGEEEEEEEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccc--cccc---cHHHHHHhc--CCCCchHHHHhhhcce
Confidence 35899999999999999999999999999999976432111111 1122 456677763 2221100000000000
Q ss_pred ccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcC--CceEEcCceEEEEEeeCCeEE-EEEc---CCc
Q 006440 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVS-VVLE---NGQ 229 (645)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~-v~~~---~g~ 229 (645)
. +... .+.....+ ...++.++|..|.+.|.+.+. ...++++++|+++..+++.+. |++. +|+
T Consensus 78 ~-~~~~-~~~~~~~~----------~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~ 145 (453)
T 3atr_A 78 K-LYSP-DMQTVWTV----------NGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNE 145 (453)
T ss_dssp E-EECT-TSSCEEEE----------EEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTE
T ss_pred E-EECC-CCceEEeE----------CCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCc
Confidence 0 0000 00000000 012578999999999988762 245889999999998888765 5554 675
Q ss_pred --EEeccEEEEccCCchhhhhhhcCCC---CCcc--cCeEEEEEEeccCCCCccccceEEEec----CceEEEEeecCCC
Q 006440 230 --CYAGDLLIGADGIWSKVRKNLFGPQ---EAIY--SGYTCYTGIADFVPADIESVGYRVFLG----HKQYFVSSDVGAG 298 (645)
Q Consensus 230 --~i~a~lvVgADG~~S~vR~~l~~~~---~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 298 (645)
+++||+||+|||.+|.+|+.+.... .+.+ ....++...........+.....++.+ ++.+++.+|..++
T Consensus 146 ~~~~~ad~VV~AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~ 225 (453)
T 3atr_A 146 ELTVYSKVVVEATGYSRSFRSKLPPELPITEDLDDKDADVAYREVLLTKEDIEDHDYLRIFIDQETSPGGYWWYFPKGKN 225 (453)
T ss_dssp EEEEECSEEEECCGGGCTTGGGSCTTSGGGCCCCGGGEEEEEEEEEEESSCCTTTTEEEEECCTTTSTTSCEEEEEEETT
T ss_pred eEEEEcCEEEECcCCchhhHHhcCCCCCcccCCCcccceeeeEEEEecCCCccCCCeEEEEECCCCCCCcEEEEEECCCC
Confidence 7999999999999999999884321 1112 112344443322211111111234443 4566777787777
Q ss_pred eEEEEEEEeCCCCCCCCCcchHHHHHHHHcCCChhHHHHHHcCCccceeecccccCCCCCcccCCcEEEEccccCcCCCC
Q 006440 299 KMQWYAFHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPN 378 (645)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rvvLvGDAAH~~~P~ 378 (645)
.+++.+....... .....+.+.+.+..+.+.+ ..........+.+....+..+|..+|++|+|||||.++|+
T Consensus 226 ~~~vg~~~~~~~~----~~~~~~~~~~~l~~~~~~~----~~~~~~~~~~~~~p~~~~~~~~~~~~v~lvGDAAh~~~P~ 297 (453)
T 3atr_A 226 KVNVGLGIQGGMG----YPSIHEYYKKYLDKYAPDV----DKSKLLVKGGALVPTRRPLYTMAWNGIIVIGDSGFTVNPV 297 (453)
T ss_dssp EEEEEEEEESSSC----CCCHHHHHHHHHHHHCTTE----EEEEEEEEEEEEEECSSCCSCSEETTEEECGGGGTCSCTT
T ss_pred eEEEEEEecCCCC----CCCHHHHHHHHHHhhhhhc----CCCeEEeccceeccCCCCCCceecCCEEEEeCcccCCCCC
Confidence 7666554432211 1112233333332111100 0000001111222223456688899999999999999999
Q ss_pred CcchhhHHHHHHHHHHHHHHHHhhccCCCCChhhHHHHHHHHHHHhhhHHHHHHHHHHHHH
Q 006440 379 LGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAA 439 (645)
Q Consensus 379 ~GqG~n~al~Da~~La~~L~~~~~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~~~ 439 (645)
+|||+|+||+||..|+++|.+.++.+. ...++|+.|+++|+++....+..++...
T Consensus 298 ~G~G~~~Ai~da~~la~~l~~~l~~~~------~~~~~L~~Y~~~r~~~~~~~~~~~~~~~ 352 (453)
T 3atr_A 298 HGGGKGSAMISGYCAAKAILSAFETGD------FSASGLWDMNICYVNEYGAKQASLDIFR 352 (453)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHHHHHTC------CSTTTTTHHHHHHHHHTHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHcCC------ccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998765320 1246899999999999887776555443
No 21
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.97 E-value=3.7e-29 Score=267.05 Aligned_cols=332 Identities=16% Similarity=0.093 Sum_probs=199.6
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhcccccccc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~ 155 (645)
.++||+||||||+|+++|+.|+++|++|+|+|+.+....... . +-.+. .+.++.+ |+++...... .....+
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~-~--~~~~~---~~~~~~l--g~~~~~~~~~-~~~~~~ 73 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVR-C--GEGLS---KGILNEA--DIKADRSFIA-NEVKGA 73 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCC-S--CCEEE---THHHHHT--TCCCCTTTEE-EEESEE
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcc-c--ccccC---HHHHHHc--CCCCChHHhh-hhcceE
Confidence 458999999999999999999999999999999863321111 1 11122 2556666 3322110000 000011
Q ss_pred ccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcC--CceEEcCceEEEEEeeCCeEE-EEEc---CCc
Q 006440 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVS-VVLE---NGQ 229 (645)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~-v~~~---~g~ 229 (645)
. +.+. .+.....++. ...+.+.++.++|..|.+.|.+.+. ...++++++|++++.+++.+. |++. ++.
T Consensus 74 ~-~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~ 147 (397)
T 3cgv_A 74 R-IYGP-SEKRPIILQS----EKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIV 147 (397)
T ss_dssp E-EECT-TCSSCEEEC---------CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEE
T ss_pred E-EEcC-CCCEEEEEec----cccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEE
Confidence 0 1111 1111011211 1112345789999999999988763 235888999999999888876 7763 456
Q ss_pred EEeccEEEEccCCchhhhhhhcCCC-CCcccCe-EEEEEEeccCCCCccccceEEEe---cCceEEEEeecCCCeEEEEE
Q 006440 230 CYAGDLLIGADGIWSKVRKNLFGPQ-EAIYSGY-TCYTGIADFVPADIESVGYRVFL---GHKQYFVSSDVGAGKMQWYA 304 (645)
Q Consensus 230 ~i~a~lvVgADG~~S~vR~~l~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 304 (645)
+++||+||+|||.+|.+|+.+.... ....... .++...... ...+......+. .++.+++.+|..++...+.+
T Consensus 148 ~~~a~~vV~A~G~~s~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~ 225 (397)
T 3cgv_A 148 DVRAKMVIAADGFESEFGRWAGLKSVILARNDIISALQYRMIN--VDVDPDYTDFYLGSIAPAGYIWVFPKGEGMANVGI 225 (397)
T ss_dssp EEEEEEEEECCCTTCHHHHHHTCCTTCCCGGGEEEEEEEEEES--CCCCTTEEEEECSTTSTTEEEEEEEEETTEEEEEE
T ss_pred EEEcCEEEECCCcchHhHHhcCCCccCCChhheeEEEEEEecc--CCCCCCcEEEEeCCcCCCceEEEEECCCCeEEEEE
Confidence 8999999999999999999983322 1111111 122222111 112222334443 35667777888777765555
Q ss_pred EEeCCCCCCCCCcchHHHHHHHHcCCChhHHHHHHcCCccceeecccccCCCCCcccCCcEEEEccccCcCCCCCcchhh
Q 006440 305 FHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGC 384 (645)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rvvLvGDAAH~~~P~~GqG~n 384 (645)
....... . ........++.+..+.+.+ ............+.......+|..+|++|+|||||.++|++|||+|
T Consensus 226 ~~~~~~~--~-~~~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~~p~~~~~~~~~~~~v~liGDAa~~~~P~~G~G~~ 298 (397)
T 3cgv_A 226 GSSINWI--H-NRFELKNYLDRFIENHPGL----KKGQDIQLVTGGVSVSKVKMPITMPGLMLVGDAARLIDPITGGGIA 298 (397)
T ss_dssp EEETTTC--S-CHHHHHHHHHHHHHTCHHH----HTSEEEEEEEEEEECCCCCSCCEETTEEECGGGGTCSCTTTCCCHH
T ss_pred Eeccccc--c-CCCCHHHHHHHHHHhCcCC----CCCeEEeeeeeeeecCCCccceeeCCEEEEEccccCCCCCCCCCHH
Confidence 4433211 1 1122223333332222221 1111111111222222345678899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCChhhHHHHHHHHHHHhhhHHHHHHHHHHH
Q 006440 385 MAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARS 437 (645)
Q Consensus 385 ~al~Da~~La~~L~~~~~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~ 437 (645)
+|++||..|++.|.+.+..+ .....+|+.|+++|+++....+..++.
T Consensus 299 ~a~~~a~~la~~l~~~~~~~------~~~~~~l~~Y~~~~~~~~~~~~~~~~~ 345 (397)
T 3cgv_A 299 NAIVSGMYAAQVTKEAIESN------DYSPQMMQKYEKLIKERFERKHLRNWV 345 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHT------CCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcC------CccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999877542 123688999999999987766655544
No 22
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.97 E-value=4.1e-29 Score=269.07 Aligned_cols=335 Identities=17% Similarity=0.142 Sum_probs=211.8
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhcccccccc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~ 155 (645)
..+||+||||||+|+++|+.|+++|++|+|+|+...+.... +..+.+.++..|+.+ |+++.+...+.......
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~-----g~~~~~~~~~~l~~~--g~~~~~~~~~~~~~~~~ 76 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVI-----GESLLPRCMEHLDEA--GFLDAVKAQGFQQKFGA 76 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCS-----CCBCCGGGHHHHHHT--TCHHHHHHTTCEEECEE
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcc-----cCcccHhHHHHHHHc--CChHHHHHcCCcccCCc
Confidence 35899999999999999999999999999999985443222 356889999999999 77888877653222222
Q ss_pred ccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcC--CceEEcCceEEEEEeeCCeEE--EEEcCCc--
Q 006440 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVS--VVLENGQ-- 229 (645)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~--v~~~~g~-- 229 (645)
. +... .....++... ......+..+.++|..|.+.|.+.+. ...++++++|++++.+++++. +...+|+
T Consensus 77 ~-~~~~---~~~~~~~~~~-~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~ 151 (421)
T 3nix_A 77 K-FVRG---KEIADFNFSD-QFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKR 151 (421)
T ss_dssp E-EEET---TEEEEEETTS-CSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEE
T ss_pred E-EEeC---CeeEEEeehh-hcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEE
Confidence 1 1111 1111111111 11122345689999999999988762 235888999999998877754 5557887
Q ss_pred EEeccEEEEccCCchhhhhhhcCCC-CCcccCeEEEEEEeccCC-CCccccceEEEe---cCceEEEEeecCCCeEEEEE
Q 006440 230 CYAGDLLIGADGIWSKVRKNLFGPQ-EAIYSGYTCYTGIADFVP-ADIESVGYRVFL---GHKQYFVSSDVGAGKMQWYA 304 (645)
Q Consensus 230 ~i~a~lvVgADG~~S~vR~~l~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 304 (645)
+++||+||+|||.+|.+|+.+.... ...+.....+..+....+ .........++. .+..+++.+|..++...+.+
T Consensus 152 ~~~a~~vV~A~G~~s~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~ 231 (421)
T 3nix_A 152 EIEARFIIDASGYGRVIPRMFGLDKPSGFESRRTLFTHIKDVKRPVAAEMEGNRITAVVHKPKVWIWVIPFSNGNTSVGF 231 (421)
T ss_dssp EEEEEEEEECCGGGCHHHHHTTCEECCSSCCCEEEEEEEECTTCCC----CCSEEEEEEEETTEEEEEEECTTSEEEEEE
T ss_pred EEEcCEEEECCCCchhhHHhcCCCCCCcCCCcEEEEEEECCCcCCCccCCCCeEEEEEeCCCCEEEEEEEECCCCEEEEE
Confidence 7999999999999999999873222 222333333333322111 111111112222 25567778888887766555
Q ss_pred EEeCCCCCCCCCcchHHHHHHHHcCCChhHHHHHHcCCcc-ceeecccccCCCCCcccCCcEEEEccccCcCCCCCcchh
Q 006440 305 FHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEE-AILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGG 383 (645)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~rvvLvGDAAH~~~P~~GqG~ 383 (645)
........ . .....++++..+..+.+.+.+.+...... .+..+..+. ....+|..+|++|||||||.++|+.|||+
T Consensus 232 ~~~~~~~~-~-~~~~~~~~l~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~v~lvGDAa~~~~P~~G~G~ 308 (421)
T 3nix_A 232 VGEPSYFD-E-YTGTPEERMRAMIANEGHIAERFKSEEFLFEPRTIEGYA-ISASKLYGDGFVLTGNATEFLDPIFSSGA 308 (421)
T ss_dssp EECHHHHT-T-SCSCHHHHHHHHHHTCTTTHHHHTTCCBSSCCEEEECCC-BEESCSEETTEEECGGGTCBCCSTTCCHH
T ss_pred EecHHHhh-h-cCCCHHHHHHHHHHhCcHHHHHHhcCccccCceeecccc-eeeeeeccCCEEEecccccccCCcccccH
Confidence 43221100 0 11123344444444555555555443322 111111111 12346778999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhccCCCCChhhHHHHHHHHHHHhhhHHHHHHH
Q 006440 384 CMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHG 433 (645)
Q Consensus 384 n~al~Da~~La~~L~~~~~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~ 433 (645)
|+|++||..|++.|.+.+.++ . ...++.|++.++.....+..
T Consensus 309 ~~A~~~a~~la~~l~~~~~~~-----~---~~~~~~y~~~~~~~~~~~~~ 350 (421)
T 3nix_A 309 TFAMESGSKGGKLAVQFLKGE-----E---VNWEKDFVEHMMQGIDTFRS 350 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHTTC-----C---CCHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCC-----c---hhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999987642 1 13567888888776654433
No 23
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.96 E-value=5.5e-27 Score=259.36 Aligned_cols=331 Identities=11% Similarity=0.057 Sum_probs=196.5
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHH------------CCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHH
Q 006440 76 KKLRILVAGGGIGGLVFALAAKR------------KGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEE 143 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~------------~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~ 143 (645)
..+||+||||||+|+++|+.|++ .|++|+|+|+...+..+. +..+.|+++++|+.+ |+.+.
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~~~~g~-----g~~~~p~~~~~l~~l--Gi~e~ 78 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDVATIGV-----GEGTWPSMRSTLSKI--GIDEN 78 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSCCCCCS-----CEECCTHHHHHHHHH--TCCHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCCCCcce-----eeechHhHHHHHHHc--CCCHH
Confidence 45799999999999999999999 999999999864332221 457889999999999 66664
Q ss_pred --HHHhccccccccccccccCC------Cce-eeecc--------CCCc-------------------------------
Q 006440 144 --VMRAGCVTGDRINGLVDGIS------GSW-YIKFD--------TFTP------------------------------- 175 (645)
Q Consensus 144 --~~~~~~~~~~~~~~~~~~~~------~~~-~~~~~--------~~~~------------------------------- 175 (645)
+...+......+. +.+... +.. ...+. ....
T Consensus 79 ~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~v~~q~~~~~~~~~~~~~ 157 (526)
T 2pyx_A 79 DFIRQCDASFKQGSR-FINWCKDPQSNVADSYLHPFSLPHGHQELDLCPYWLPHAEQVSFAEAVCSQQVLTQLGLAPKSI 157 (526)
T ss_dssp HHHHHTTCEEECEEE-EESCSSCCBTTBCCEEEEESSCCTTTTTCCCHHHHGGGTTTSCHHHHHCSHHHHHHTTBCSSCT
T ss_pred HHHHHcCCEEECCCc-ccCCCccccCCCCCceecCCCCCCCCCCCChhHHHHhhhhccCchhhcccccchhhhccchhhh
Confidence 4443321111110 000000 000 00000 0000
Q ss_pred -hhh--cCCCeEEeeCHHHHHHHHHHHcC---CceEEcCceEEEEEeeCCe--EEEEEcCCcEEeccEEEEccCCchhhh
Q 006440 176 -AAE--KGLPVTRVISRMTLQQILAKAVG---DEIILNESNVIDFKDHGDK--VSVVLENGQCYAGDLLIGADGIWSKVR 247 (645)
Q Consensus 176 -~~~--~~~~~~~~i~r~~l~~~L~~~~~---~~~i~~~~~v~~i~~~~~~--v~v~~~~g~~i~a~lvVgADG~~S~vR 247 (645)
... ...+..+.++|..|.+.|.+.+. ...++++ +|++++.++++ +.|++.+|.+++||+||+|||.+|.+|
T Consensus 158 ~~~~~~~~~~~~~~~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~~~ 236 (526)
T 2pyx_A 158 VTAQYHFQNNYGYHLNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSLLL 236 (526)
T ss_dssp TSCTTCCSSCCEEEECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCCCC
T ss_pred hccccCCCCCeeEEEcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchHHH
Confidence 000 11234688999999999988653 2357778 69999876554 467788877899999999999999994
Q ss_pred hhhcCCCCCcc----cCeEEEEEEeccCC--CCccccceEEEecCceEEEEeecCCCeEEEEEEEeCCCCCCCCCcchHH
Q 006440 248 KNLFGPQEAIY----SGYTCYTGIADFVP--ADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKE 321 (645)
Q Consensus 248 ~~l~~~~~~~~----~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (645)
+..++.....+ .....+........ ....... .....+..+++.+|..+.....+++ . +.. . ......+
T Consensus 237 ~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~pl~~~~~~~~v~-~-~~~-~-~~~~~~~ 311 (526)
T 2pyx_A 237 GEHLQVPFLSQKSVLFNDRALAIQVPYSDANSPIASCT-HSTAQPNGWIWDIGLPTRKGVGYVY-S-SSH-T-NDIDAQK 311 (526)
T ss_dssp CCCTCCCEEECHHHHCCCEEEEEEEECSSTTCCCCSSE-EEEEETTEEEEEEECSSEEEEEEEE-C-TTT-C-CHHHHHH
T ss_pred HHHhCCCcccccccccCccEEEEEeeccCCCCCCCCce-eEEecCCCeEEEeeCCCceEEEEEe-c-CCC-C-ChHHHHH
Confidence 43323221111 11112221111111 1111111 1222344566666776543322222 1 111 1 1122334
Q ss_pred HHHHHHcCCChhHHHHHHcCCccceeecccccCCCCCcccCCcEEEEccccCcCCCCCcchhhHHHHHHHHHHHHHHHHh
Q 006440 322 RLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKAC 401 (645)
Q Consensus 322 ~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rvvLvGDAAH~~~P~~GqG~n~al~Da~~La~~L~~~~ 401 (645)
.+.+.+..+.+. +..... ..+.+.. ....+|..+|++|||||||.++|+.|||+|+|++||..|+++|...
T Consensus 312 ~l~~~l~~~~~~----l~~~~~---~~~~~~~-~~~~~~~~grv~LiGDAAh~~~P~~GqGi~~ai~da~~La~~L~~~- 382 (526)
T 2pyx_A 312 TLFNYLGVDGAA----ADKLEP---RQLAINP-GYRAKCWQNNCIAIGMAAGFIEPLEASALALIEWTASTLAQQLPPN- 382 (526)
T ss_dssp HHHHHHTCCHHH----HHHCCC---EEEECCC-EEESCSEETTEEECGGGTEECCCTTCHHHHHHHHHHHHHHHTCCSC-
T ss_pred HHHHHHHhcCcc----cccCCc---eEEeccc-CccccccCCCEEEEEhhhcccCccccccHHHHHHHHHHHHHHhhhc-
Confidence 555666555222 221211 1111111 1234677899999999999999999999999999999999877521
Q ss_pred hccCCCCChhhHHHHHHHHHHHhhhHHHHHHHHHHH
Q 006440 402 KKSNESKTPIDIVSALKSYERARRLRVAVIHGLARS 437 (645)
Q Consensus 402 ~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~ 437 (645)
....+.+|+.|+++|+++...+.++..+
T Consensus 383 --------~~~~~~~l~~Y~~~~~~~~~~~~~~~~~ 410 (526)
T 2pyx_A 383 --------RMVMDTISARVNERYQQHWQQIIDFLKL 410 (526)
T ss_dssp --------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------CCcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2234689999999999998877665443
No 24
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.95 E-value=2e-26 Score=257.11 Aligned_cols=328 Identities=13% Similarity=0.051 Sum_probs=188.7
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHC------CCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhcc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRK------GFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGC 149 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~------g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~ 149 (645)
+.+||+||||||+|+++|+.|+++ |++|+|+|+.+...... ..+..+.+++++.| + +.|. ..+.
T Consensus 34 ~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~---~~g~~l~~~~l~~l--l--~~~~---~~g~ 103 (584)
T 2gmh_A 34 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHT---LSGACLDPRAFEEL--F--PDWK---EKGA 103 (584)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTC---CCCCEECTHHHHHH--C--TTHH---HHTC
T ss_pred cCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCcc---ccccccCHHHHHHH--H--HHHH---hcCC
Confidence 358999999999999999999999 99999999975432111 11335778777665 3 2222 2221
Q ss_pred cccc-----ccccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcC--CceEEcCceEEEEEeeCC-eE
Q 006440 150 VTGD-----RINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGD-KV 221 (645)
Q Consensus 150 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~-~v 221 (645)
.... .+. +.... + ...++.. +......+..+.++|..|.++|.+.+. ...++++++|+++..+++ .+
T Consensus 104 ~~~~~~~~~~~~-~~~~~-~--~~~~~~~-~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V 178 (584)
T 2gmh_A 104 PLNTPVTEDRFG-ILTEK-Y--RIPVPIL-PGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSV 178 (584)
T ss_dssp CCCEECCEEEEE-EECSS-C--EEECCCC-TTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSE
T ss_pred ceeeeechhhee-eeccC-C--Ccccccc-CccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCE
Confidence 1110 011 11110 1 1112100 000011122578999999999988763 235889999999988764 35
Q ss_pred E-EEEc------CC---------cEEeccEEEEccCCchhhhhhhc---CCC-CCcccCe-EEEEEEeccCCCCccccce
Q 006440 222 S-VVLE------NG---------QCYAGDLLIGADGIWSKVRKNLF---GPQ-EAIYSGY-TCYTGIADFVPADIESVGY 280 (645)
Q Consensus 222 ~-v~~~------~g---------~~i~a~lvVgADG~~S~vR~~l~---~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~ 280 (645)
. |.+. +| .+++||+||+|||.+|.+|+.+. +.. ...+..+ ..+..+.............
T Consensus 179 ~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~~l~~~~gl~~~~~p~~~g~g~~~~~~v~~~~~~~~~~ 258 (584)
T 2gmh_A 179 KGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQTYGIGLKELWVIDEKKWKPGRV 258 (584)
T ss_dssp EEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTTTTTSCCCCEEEEEEEEEECCGGGCCTTEE
T ss_pred EEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCchHHHHHHHHhCCCCCCCchhHHhhhhhheecCcccccCCeE
Confidence 4 6665 33 57999999999999999999872 221 1111111 1222222111111111111
Q ss_pred EEEec------CceEEEEeecC--CCeEEEEEEEeCCCCCCCCCcchHHHHHHHHcCCChhHHHHHHcCCccceeecccc
Q 006440 281 RVFLG------HKQYFVSSDVG--AGKMQWYAFHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIY 352 (645)
Q Consensus 281 ~~~~~------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 352 (645)
..+.+ .....+.++.. ++.+.+.+......... .....+.+.++.. .+.+.+.+............++
T Consensus 259 ~~~~g~~~~~~~~gg~~~~~~~~~~~~~~vg~~~~~~~~~~--~~~~~~~l~~~~~--~p~i~~~l~~~~~~~~~~~~~~ 334 (584)
T 2gmh_A 259 DHTVGWPLDRHTYGGSFLYHLNEGEPLLALGFVVGLDYQNP--YLSPFREFQRWKH--HPSIKPTLEGGKRIAYGARALN 334 (584)
T ss_dssp EEEEETTSCTTSCEEEEEEECCSSSCEEEEEEEEETTCCCT--TCCHHHHHHHHTT--STTTHHHHTTCEEEEEEEEEEE
T ss_pred EEEEeccccCCcCCceEEEEecCCCCeEEEEEEEecCcccc--cCChHHHHHHHHh--ChHHHHHhCCCeEEEecceEcc
Confidence 22221 11223344555 56666655443322111 1123344444332 3445555543221111111121
Q ss_pred --cCCCCCcccCCcEEEEccccCcCCCCCcchhhHHHHHHHHHHHHHHHHhhccCCCCChhhHHHH---HHHHHHHhhhH
Q 006440 353 --DRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSA---LKSYERARRLR 427 (645)
Q Consensus 353 --~~~~~~~~~~~rvvLvGDAAH~~~P~~GqG~n~al~Da~~La~~L~~~~~~~~~~~~~~~~~~~---L~~Y~~~R~~~ 427 (645)
......+|..+|++|||||||.++|+.|||+|+||+||..||++|.++++.+. ....++ |+.|+++|+++
T Consensus 335 ~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~~~g~-----~~~~~a~~~L~~Ye~~r~~~ 409 (584)
T 2gmh_A 335 EGGFQSIPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLTSEN-----LQSKTIGLHVTEYEDNLKNS 409 (584)
T ss_dssp CCGGGGCCCCEETTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHTCCC-----CCCSSSSCCCTHHHHHHHTS
T ss_pred CCCcccCCccccCCEEEEcccccccCccccccHHHHHHHHHHHHHHHHHHHHcCC-----cchhhhhhhHHHHHHHHHHh
Confidence 12235678899999999999999999999999999999999999998875310 011343 89999999987
No 25
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.95 E-value=6.9e-26 Score=250.05 Aligned_cols=325 Identities=12% Similarity=0.033 Sum_probs=187.9
Q ss_pred cCcEEEEcCCHHHHHHHHHHHH---CCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHH--HHHhcccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKR---KGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEE--VMRAGCVT 151 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~---~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~--~~~~~~~~ 151 (645)
.+||+|||||++|+++|+.|++ +|++|+|+|+...+..+. +..+.+.+..+++.+ |+.+. +.......
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~~~~~~-----g~~~~~~~~~~l~~l--gi~~~~~~~~~~~~~ 74 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNVRRIGV-----GEATFSTVRHFFDYL--GLDEREWLPRCAGGY 74 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC-------C-----CEECCTTHHHHHHHH--TCCHHHHHHHTTCEE
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCCCceee-----ccccCcchHHHHHHc--CCCHHHHHHHcCCeE
Confidence 3699999999999999999999 999999999975332222 355778888999998 55443 33322111
Q ss_pred ccccccccccC-CCce-eeecc--------------------------------------CC-----Cchh----h----
Q 006440 152 GDRINGLVDGI-SGSW-YIKFD--------------------------------------TF-----TPAA----E---- 178 (645)
Q Consensus 152 ~~~~~~~~~~~-~~~~-~~~~~--------------------------------------~~-----~~~~----~---- 178 (645)
...+. +.+.. .+.. ...+. .. .... .
T Consensus 75 ~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (511)
T 2weu_A 75 KLGIR-FENWSEPGEYFYHPFERLRVVDGFNMAEWWLAVGDRRTSFSEACYLTHRLCEAKRAPRMLDGSLFASQVDESLG 153 (511)
T ss_dssp ECEEE-EESSSSTTCEEEEESCCCCEETTEEHHHHHHHHC----CHHHHHCHHHHHHHTTBCSBCTTSCBCC------CC
T ss_pred eccce-ecCCCCCCCceEcCCCCCCCCCCCchHHHHHhccccccCcccccccccCHHHhhhhHHhHhcCCcccccccccc
Confidence 10000 00000 0000 00000 00 0000 0
Q ss_pred ------cC--CCeEEeeCHHHHHHHHHHHcC--CceEEcCceEEEEEeeCCe--EEEEEcCCcEEeccEEEEccCCchhh
Q 006440 179 ------KG--LPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDK--VSVVLENGQCYAGDLLIGADGIWSKV 246 (645)
Q Consensus 179 ------~~--~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~--v~v~~~~g~~i~a~lvVgADG~~S~v 246 (645)
.. .+..+.++|..|.+.|.+.+. ...++++ +|++++.++++ +.|++.+|++++||+||+|||.+|.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~ 232 (511)
T 2weu_A 154 RSTLAEQRAQFPYAYHFDADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGLL 232 (511)
T ss_dssp SCCGGGCCSCCSCEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCCC
T ss_pred ccccccCcCCCCeeEEEcHHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchHH
Confidence 01 345688999999999988752 2347778 99999886555 67888888889999999999999999
Q ss_pred hhhhcCCCC-----CcccCeEEEEEEeccCCC-CccccceEEEecCceEEEEeecCCCeEEEEEEEeCCCCCCCCCcchH
Q 006440 247 RKNLFGPQE-----AIYSGYTCYTGIADFVPA-DIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKK 320 (645)
Q Consensus 247 R~~l~~~~~-----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (645)
|+.+.+... ..+.. .++......... ..... ......+..+++.+|..+ ...+.+... +. .. ..+...
T Consensus 233 ~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~P~~~-~~~~g~~~~-~~-~~-~~~~~~ 306 (511)
T 2weu_A 233 INQTLGGRFQSFSDVLPNN-RAVALRVPRENDEDMRPY-TTATAMSAGWMWTIPLFK-RDGNGYVYS-DE-FI-SPEEAE 306 (511)
T ss_dssp CCCCTCCCEEECTTTCCCC-EEEEEEEECSSGGGCCSS-EEEEEETTEEEEEEECSS-EEEEEEEEC-TT-TS-CHHHHH
T ss_pred HHHHhCCCCccccccCccc-ceEEEEeccCCCCCCCcc-eeceecCCCcEEEEECCC-ceEEEEEEC-CC-CC-CHHHHH
Confidence 765533221 11122 122111111111 01111 122233445666677765 333222222 11 11 111222
Q ss_pred HHHHHHHcCCChhHHHHHHcCCccceeecccccCCCCCcccCCcEEEEccccCcCCCCCcchhhHHHHHHHHHHHHHHHH
Q 006440 321 ERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKA 400 (645)
Q Consensus 321 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rvvLvGDAAH~~~P~~GqG~n~al~Da~~La~~L~~~ 400 (645)
+.+.+.+ .+.+.+ ....... +.. ....+|..+|++|||||||.++|+.|||+|+|++||..|++.|...
T Consensus 307 ~~l~~~~-~~~~~~-------~~~~~~~--~~~-~~~~~~~~~rv~liGDAAh~~~P~~g~G~~~a~~da~~La~~l~~~ 375 (511)
T 2weu_A 307 RELRSTV-APGRDD-------LEANHIQ--MRI-GRNERTWINNCVAVGLSAAFVEPLESTGIFFIQHAIEQLVKHFPGE 375 (511)
T ss_dssp HHHHHHH-CTTCTT-------SCCEEEE--CCC-EEESCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHTCCCT
T ss_pred HHHHHHh-Cccccc-------ccceeEE--eec-cccccccCCCEEEEechhhccCccccccHHHHHHHHHHHHHHhccC
Confidence 3333333 222111 1111111 111 1123566799999999999999999999999999999999887531
Q ss_pred hhccCCCCChhhHHHHHHHHHHHhhhHHHHHHHHHHH
Q 006440 401 CKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARS 437 (645)
Q Consensus 401 ~~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~ 437 (645)
...+.+|+.|+++|+++...+..+...
T Consensus 376 ----------~~~~~~l~~Y~~~~~~~~~~~~~~~~~ 402 (511)
T 2weu_A 376 ----------RWDPVLISAYNERMAHMVDGVKEFLVL 402 (511)
T ss_dssp ----------TCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----------CCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 123678999999999998877665543
No 26
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.94 E-value=2.1e-26 Score=248.28 Aligned_cols=326 Identities=17% Similarity=0.179 Sum_probs=184.5
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhcccccccc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~ 155 (645)
+.+||+||||||+|+++|+.|+++|++|+|+|+.+.+....|.......+...++..++.++.+.|...... .....+
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~--~~~~~~ 98 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRKPDEYSGLRLLNTVAHNAVTVQREVALDVNEWPSEEFG--YFGHYY 98 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCCGGGSTTSCCCCCCCBCHHHHHHHHHTTCCCSCHHHHC--EEEEEE
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCChHhhcccccccchhccchhhhhhhhcChhhhhhhccc--ccceeE
Confidence 347999999999999999999999999999999864332222221223345567777777754444332111 111111
Q ss_pred ccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCC--ceEEcCc-eEEEEEeeCCeEEEEEcCCcEEe
Q 006440 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGD--EIILNES-NVIDFKDHGDKVSVVLENGQCYA 232 (645)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~-~v~~i~~~~~~v~v~~~~g~~i~ 232 (645)
. .. ... ...+.. .. ....+.+++..+...|.+.+.. ..++... ++.+++ .....
T Consensus 99 ~--~~-~~~--~~~~~~-----~~-~~~~~~v~~~~l~~~L~~~~~~~Gv~v~~~~v~~~~l~------------~~~~~ 155 (430)
T 3ihm_A 99 Y--VG-GPQ--PMRFYG-----DL-KAPSRAVDYRLYQPMLMRALEARGGKFCYDAVSAEDLE------------GLSEQ 155 (430)
T ss_dssp E--EC-SSS--CEEEEE-----EE-EEEEBEECHHHHHHHHHHHHHHTTCEEEECCCCGGGHH------------HHHTT
T ss_pred E--EC-CCC--ccccch-----hc-CCcceeecHHHHHHHHHHHHHHcCCEEEEEecchhhhh------------hhccc
Confidence 0 00 000 111110 00 1224688999999999887621 2232211 111110 01126
Q ss_pred ccEEEEccCCchhhhhhhcCCCCCcc--cCeEEEEEEe-ccCCCCccccceEEEecCceEEEEeec-CCCeEEEEEEEeC
Q 006440 233 GDLLIGADGIWSKVRKNLFGPQEAIY--SGYTCYTGIA-DFVPADIESVGYRVFLGHKQYFVSSDV-GAGKMQWYAFHKE 308 (645)
Q Consensus 233 a~lvVgADG~~S~vR~~l~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 308 (645)
+|+||+|||.+|.+|..........| .+.....++. ...+++.....+..+.+.+..++.+.. .++...++++...
T Consensus 156 ad~VV~AdG~~S~~~~~~~~~~~~~~~~p~r~~~~~~~~g~~~~~~~~~~~~~~~~~G~~~~~p~~~~~g~~~~~~~~~~ 235 (430)
T 3ihm_A 156 YDLLVVCTGKYALGKVFEKQSENSPFEKPQRALCVGLFKGIKEAPIRAVTMSFSPGHGELIEIPTLSFNGMSTALVLENH 235 (430)
T ss_dssp SSEEEECCCCTTGGGGSCBCGGGCCCSSCSSEEEEEEEESBCCCSSCCEEEEEETTTEEEEEEEEEETTEEEEEEEEEEC
T ss_pred CCEEEECCCCcchHHhccCCCCCCcccCCCeeEEEEEEccCCCCCcCeeeeeecCCCcceEEecccCCCcceEEEEEEec
Confidence 89999999999999854422111122 2222222221 122222223344555555555444322 2344444444443
Q ss_pred CCCCCC---------CCcchHHHHHHHHcCCChhHHHHHHcCC------ccceeeccc--ccCCCCCcccCCcEEE-Ecc
Q 006440 309 PAGGVD---------GPEGKKERLLKIFEGWCDNVVDLILATD------EEAILRRDI--YDRTPIFTWGRGRVTL-LGD 370 (645)
Q Consensus 309 ~~~~~~---------~~~~~~~~l~~~~~~~~~~~~~~l~~~~------~~~~~~~~~--~~~~~~~~~~~~rvvL-vGD 370 (645)
+..... .++...+.+++.+..|.+.+.+.+.... ...+....+ ....+..+|..+|++| +||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~GD 315 (430)
T 3ihm_A 236 IGSDLEVLAHTKYDDDPRAFLDLMLEKLGKHHPSVAERIDPAEFDLANSSLDILQGGVVPAFRDGHATLNNGKTIIGLGD 315 (430)
T ss_dssp TTSSSGGGGTSCTTTCHHHHHHHHHHHHHHHCHHHHTTBCTTTCEESSSTTSEEEECCCCEEBCSEEECTTSCEEEECGG
T ss_pred CCCcHHHhccccCCCCHHHHHHHHHHHHHHhCccHHHHHhhchhccccCccceeecceeecccccccccCCCCEEEEecC
Confidence 322110 1222234667777778877766654443 111111111 1123456889999999 999
Q ss_pred ccCcCCCCCcchhhHHHHHHHHHHHHHHHHhhccCCCCChhhHHHHHHHHHHHhh-hHHHHHHHHHH
Q 006440 371 SVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARR-LRVAVIHGLAR 436 (645)
Q Consensus 371 AAH~~~P~~GqG~n~al~Da~~La~~L~~~~~~~~~~~~~~~~~~~L~~Y~~~R~-~~~~~~~~~s~ 436 (645)
|||.++|++|||+|+||+||.+|+++|.... +..++|..|+.+|+ .++..+.+.++
T Consensus 316 Aah~~~p~~g~G~~~a~~da~~l~~~l~~~~----------~~~~~~~~~~~~r~~~~~~~~~~~~~ 372 (430)
T 3ihm_A 316 IQATVDPVLGQGANMASYAAWILGEEILAHS----------VYDLRFSEHLERRRQDRVLCATRWTN 372 (430)
T ss_dssp GTEECCGGGCCHHHHHHHHHHHHHHHHHHCS----------CCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCchhhhHHHHHHHHHHHHHHHHhcC----------CHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998741 24689999999998 55555554444
No 27
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.94 E-value=1.2e-25 Score=249.40 Aligned_cols=325 Identities=11% Similarity=0.056 Sum_probs=189.0
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHH---CCCeEEEEeccCccccCCCCcccceeeCchHHH-HHHhcChhHHHH--HHHhcc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKR---KGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALA-ALEAIDLDVAEE--VMRAGC 149 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~---~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~-~l~~l~~g~~~~--~~~~~~ 149 (645)
..+||+|||||++|+++|+.|++ +|++|+|+|+...+..+. +..+.+.+.. +++.+ |+.+. +.....
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~~~~-----g~~~~~~~~~~~l~~l--G~~~~~~~~~~~~ 76 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAIPRIGV-----GEATIPSLQKVFFDFL--GIPEREWMPQVNG 76 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSSCCCCS-----CEECCTHHHHHTHHHH--TCCHHHHGGGGTC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCCCCcCC-----CcccchhHHHHHHHHh--CCCHHHHHHhcCc
Confidence 45799999999999999999999 999999999964332221 3567788888 89888 44432 222111
Q ss_pred cccc--cccccccc--CC-Cce-eeeccCC----------------------C-----------------c---hhhcCC
Q 006440 150 VTGD--RINGLVDG--IS-GSW-YIKFDTF----------------------T-----------------P---AAEKGL 181 (645)
Q Consensus 150 ~~~~--~~~~~~~~--~~-~~~-~~~~~~~----------------------~-----------------~---~~~~~~ 181 (645)
.... .+..+... .. +.. ...+... . + ......
T Consensus 77 ~~~~g~~~~~w~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 156 (538)
T 2aqj_A 77 AFKAAIKFVNWRKSPDPSRDDHFYHLFGNVPNCDGVPLTHYWLRKREQGFQQPMEYACYPQPGALDGKLAPCLSDGTRQM 156 (538)
T ss_dssp EEECEEEEESCSSSCCTTSCCEEEEESSCCCEETTEEHHHHHHHHHHTTCCSCHHHHHCSCHHHHHTTBCSBCTTCCBCS
T ss_pred hhhCCccccCcCcccccCCCCceECCCCccCccccCchhHHHHHhcccccccCccccccccccHhhhccchHhhcCCcCC
Confidence 1000 00000000 00 000 0000000 0 0 000013
Q ss_pred CeEEeeCHHHHHHHHHHHcC--CceEEcCceEEEEEeeCCe--EEEEEcCCcEEeccEEEEccCCchhhhhhhcCCCCCc
Q 006440 182 PVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDK--VSVVLENGQCYAGDLLIGADGIWSKVRKNLFGPQEAI 257 (645)
Q Consensus 182 ~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~--v~v~~~~g~~i~a~lvVgADG~~S~vR~~l~~~~~~~ 257 (645)
+..+.++|..|.+.|.+.+. ...++.+ +|++++.++++ +.|++.+|++++||+||+|||.+|.+|+.+.+.....
T Consensus 157 ~~~~~i~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~~~~~lg~~~~~ 235 (538)
T 2aqj_A 157 SHAWHFDAHLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGLLINQALKEPFID 235 (538)
T ss_dssp CCEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCCCCCCCTCCCEEE
T ss_pred CccEEEeHHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchhhHHHHhCCCccc
Confidence 45789999999999988762 2347778 89999886554 5788888888999999999999999976654332111
Q ss_pred cc----CeEEEEEEeccCCC--CccccceEEEecCceEEEEeecCCCeEEEEEEEeCCCCCCCCCcchHHHHHHHHcCCC
Q 006440 258 YS----GYTCYTGIADFVPA--DIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKERLLKIFEGWC 331 (645)
Q Consensus 258 ~~----~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 331 (645)
+. ...++......... .... .......+..+++.+|..+.....+ .+.. . ....+...+.+.+.+...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~p~~~~~~~g~-v~~~-~--~~~~~~~~~~l~~~~~~~- 309 (538)
T 2aqj_A 236 MSDYLLCDSAVASAVPNDDARDGVEP-YTSSIAMNSGWTWKIPMLGRFGSGY-VFSS-H--FTSRDQATADFLKLWGLS- 309 (538)
T ss_dssp CTTTCCCCEEEEEEEECCHHHHCCCS-SEEEEECSSEEEEEEEETTEEEEEE-EECT-T--TSCHHHHHHHHHHHHTCC-
T ss_pred cccccccceEEEEecccCCcccCCCC-ceeeeecCCceEEEecCCCceEEEE-EEcC-C--CCChHHHHHHHHHHhcCC-
Confidence 11 11222211111000 0111 1112234455666667765422222 2211 1 111122233444444331
Q ss_pred hhHHHHHHcCCccceeecccccCCCCCcccCCcEEEEccccCcCCCCCcchhhHHHHHHHHHHHHHHHHhhccCCCCChh
Q 006440 332 DNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPI 411 (645)
Q Consensus 332 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rvvLvGDAAH~~~P~~GqG~n~al~Da~~La~~L~~~~~~~~~~~~~~ 411 (645)
+ + . ..... .+.. ....+|..+|++|||||||.++|+.|||+|+|++||..|++.|.. ..
T Consensus 310 ~-~------~-~~~~~--~~~~-~~~~~~~~grvvliGDAAh~~~P~~gqG~~~a~~da~~La~~L~~----------~~ 368 (538)
T 2aqj_A 310 D-N------Q-PLNQI--KFRV-GRNKRAWVNNCVSIGLSSCFLEPLESTGIYFIYAALYQLVKHFPD----------TS 368 (538)
T ss_dssp T-T------C-CCEEE--ECCC-EEESCSEETTEEECGGGTEECCGGGSCHHHHHHHHHHHHHHTCCB----------TT
T ss_pred C-C------C-CceEE--eecc-ccccccccCCEEEEcccccccCcchhccHHHHHHHHHHHHHHhhc----------cC
Confidence 1 0 1 11111 1111 113457789999999999999999999999999999999987742 11
Q ss_pred hHHHHHHHHHHHhhhHHHHHHHHH
Q 006440 412 DIVSALKSYERARRLRVAVIHGLA 435 (645)
Q Consensus 412 ~~~~~L~~Y~~~R~~~~~~~~~~s 435 (645)
..+.+|+.|+++|+++...+..+.
T Consensus 369 ~~~~~l~~Y~~~~~~~~~~~~~~~ 392 (538)
T 2aqj_A 369 FDPRLSDAFNAEIVHMFDDCRDFV 392 (538)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHH
Confidence 236789999999999887765544
No 28
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.94 E-value=3.6e-25 Score=245.98 Aligned_cols=328 Identities=10% Similarity=0.050 Sum_probs=190.8
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHH---CCCeEEEEeccCccccCCCCcccceeeCchHHH-HHHhcChhHHHH--HHHhcc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKR---KGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALA-ALEAIDLDVAEE--VMRAGC 149 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~---~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~-~l~~l~~g~~~~--~~~~~~ 149 (645)
..+||+|||||++|+++|+.|++ .|++|+|||+...+.... +..+.|.+.+ +++.+ |+.+. +.....
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~~~~-----g~~~~p~~~~~~l~~l--Gi~~~~~~~~~~~ 96 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDIPTLGV-----GEATIPNLQTAFFDFL--GIPEDEWMRECNA 96 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCCCCCCC-----CEECCTHHHHHTHHHH--TCCHHHHHHHTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCCCccce-----eeeechhHHHHHHHHh--CCChHHHHHhcCC
Confidence 46899999999999999999999 999999999965332222 3567888899 99998 55544 433221
Q ss_pred ccccccc-cccccC-------------CCceeeeccC----------------------C-C---c------hhhc----
Q 006440 150 VTGDRIN-GLVDGI-------------SGSWYIKFDT----------------------F-T---P------AAEK---- 179 (645)
Q Consensus 150 ~~~~~~~-~~~~~~-------------~~~~~~~~~~----------------------~-~---~------~~~~---- 179 (645)
.....+. ..+... .......+.. . . . ....
T Consensus 97 ~~~~g~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 176 (550)
T 2e4g_A 97 SYKVAIKFINWRTAGEGTSEARELDGGPDHFYHSFGLLKYHEQIPLSHYWFDRSYRGKTVEPFDYACYKEPVILDANRSP 176 (550)
T ss_dssp EEECEEEEESSSSCCCCCSSCCEETTEESEEEEESSCCCEETTEEHHHHHHHHHHTTSCCCCHHHHHCSHHHHHHTTBCS
T ss_pred eEEEeeeEeecccccccccccccccCCCCeeEecCCccCCCCcccHHHHHHhhcccccccccccccccchhhHHHhhhhh
Confidence 1111110 001100 0000011110 0 0 0 0000
Q ss_pred -------CCCeEEeeCHHHHHHHHHHHcC---CceEEcCceEEEEEeeCCe--EEEEEcCCcEEeccEEEEccCCchhhh
Q 006440 180 -------GLPVTRVISRMTLQQILAKAVG---DEIILNESNVIDFKDHGDK--VSVVLENGQCYAGDLLIGADGIWSKVR 247 (645)
Q Consensus 180 -------~~~~~~~i~r~~l~~~L~~~~~---~~~i~~~~~v~~i~~~~~~--v~v~~~~g~~i~a~lvVgADG~~S~vR 247 (645)
..+..+.+++..|.+.|.+.+. ...++++ +|++++.++++ +.|++.+|++++||+||+|||.+|.++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~~~ 255 (550)
T 2e4g_A 177 RRLDGSKVTNYAWHFDAHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGLLI 255 (550)
T ss_dssp BCTTSCBCSCCEEEECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCCCC
T ss_pred HhhcCCCCCCcceEEcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchhhH
Confidence 2345688999999999988752 3357788 99999876554 678888898899999999999999995
Q ss_pred hhhcCCCCCccc----CeEEEEEEeccCCC--CccccceEEEecCceEEEEeecCCCeEEEEEEEeCCCCCCCCCcchHH
Q 006440 248 KNLFGPQEAIYS----GYTCYTGIADFVPA--DIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKE 321 (645)
Q Consensus 248 ~~l~~~~~~~~~----~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (645)
+...+.....+. ....+......... .... .......+..+++.+|..+ .....+... .. . ...+...+
T Consensus 256 ~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~ipl~~-~~~~g~v~~-~~-~-~~~~~~~~ 330 (550)
T 2e4g_A 256 NKAMEEPFLDMSDHLLNDSAVATQVPHDDDANGVEP-FTSAIAMKSGWTWKIPMLG-RFGTGYVYS-SR-F-ATEDEAVR 330 (550)
T ss_dssp CCCTCCCEEECTTTCCCCEEEEEEEECCHHHHCCCS-SEEEEECSSEEEEEEECSS-EEEEEEEEC-TT-T-SCHHHHHH
T ss_pred HHHhCCCcccccccccccceEEEeecccCCcccCCC-ceeeeecCCceEEEccCCC-ccceEEEEe-cC-C-CChHHHHH
Confidence 544332211111 11111111111100 0111 1122223455566666655 222222221 11 1 11112223
Q ss_pred HHHHHHcCCChhHHHHHHcCCccceeecccccCCCCCcccCCcEEEEccccCcCCCCCcchhhHHHHHHHHHHHHHHHHh
Q 006440 322 RLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKAC 401 (645)
Q Consensus 322 ~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rvvLvGDAAH~~~P~~GqG~n~al~Da~~La~~L~~~~ 401 (645)
.+.+.+... +.+ ....... +......+|..+|++|||||||.++|+.|||+|+|++||..|+++|..
T Consensus 331 ~l~~~~~~~-p~l-------~~~~~i~---~~~~~~~~~~~~rvvliGDAAh~~~P~~GqGi~~a~~da~~La~~L~~-- 397 (550)
T 2e4g_A 331 EFCEMWHLD-PET-------QPLNRIR---FRVGRNRRAWVGNCVSIGTSSCFVEPLESTGIYFVYAALYQLVKHFPD-- 397 (550)
T ss_dssp HHHHHTTCC-TTT-------SCCEEEE---CCCEEESCSEETTEEECSTTTEECCGGGSCHHHHHHHHHHHHHHTCCC--
T ss_pred HHHHhhCcC-ccc-------CCCceEE---ecCCCccccccCCEEEEehhhcccCccchhhHHHHHHHHHHHHHhccc--
Confidence 333333221 111 1111111 111123346679999999999999999999999999999999987742
Q ss_pred hccCCCCChhhHHHHHHHHHHHhhhHHHHHHHHHHH
Q 006440 402 KKSNESKTPIDIVSALKSYERARRLRVAVIHGLARS 437 (645)
Q Consensus 402 ~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~ 437 (645)
....+.+|+.|+++|+++...+.++...
T Consensus 398 --------~~~~~~~l~~Y~~~~~~~~~~i~~~~~~ 425 (550)
T 2e4g_A 398 --------KSLNPVLTARFNREIETMFDDTRDFIQA 425 (550)
T ss_dssp --------TTCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------cCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1123689999999999999877766554
No 29
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.82 E-value=1.2e-19 Score=198.60 Aligned_cols=136 Identities=24% Similarity=0.212 Sum_probs=100.5
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhcccccccc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~ 155 (645)
..+||+||||||+|+++|+.|+++|++|+|+|+.+..... ....+.+.+++.|+.+ |+++.. + .
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~-----~~~~~~~~~~~~l~~~--g~~~~~---~-----~- 154 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRH-----NVLHLWPFTIHDLRAL--GAKKFY---G-----R- 154 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCC-----CEEECCHHHHHHHHTT--THHHHC---T-----T-
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCC-----CcccCChhHHHHHHHc--CCcccc---c-----c-
Confidence 4689999999999999999999999999999997543211 1355778888888888 554321 0 0
Q ss_pred ccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcC--CceEEcCceEEEEEee---CCeEEEEE--c-C
Q 006440 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDH---GDKVSVVL--E-N 227 (645)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~---~~~v~v~~--~-~ 227 (645)
+.. . + ...+++..|.+.|.+.+. ...++++++|++++.+ ++.+.|++ . +
T Consensus 155 --~~~---~-----------------~-~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~ 211 (497)
T 2bry_A 155 --FCT---G-----------------T-LDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPP 211 (497)
T ss_dssp --TTC---T-----------------T-CCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCC
T ss_pred --ccc---c-----------------c-cccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCC
Confidence 000 0 0 124667888888877652 3358889999999874 35677777 4 5
Q ss_pred C--cEEeccEEEEccCCchhhhhhh
Q 006440 228 G--QCYAGDLLIGADGIWSKVRKNL 250 (645)
Q Consensus 228 g--~~i~a~lvVgADG~~S~vR~~l 250 (645)
| .+++||+||+|||.+|.+|+..
T Consensus 212 g~~~~i~ad~VV~A~G~~S~~r~~~ 236 (497)
T 2bry_A 212 AQLASYEFDVLISAAGGKFVPEGFT 236 (497)
T ss_dssp HHHHTCCBSEEEECCCTTCCCTTCE
T ss_pred CCEEEEEcCEEEECCCCCccccccc
Confidence 6 5799999999999999999865
No 30
>4h87_A Kanadaptin; FHA domain of PF00498, mRNA processing, nucleus, structural joint center for structural genomics, JCSG, protein structu initiative; HET: SO4; 1.55A {Homo sapiens}
Probab=99.79 E-value=2.1e-19 Score=157.76 Aligned_cols=97 Identities=24% Similarity=0.378 Sum_probs=76.5
Q ss_pred CCcEEEEecCCCCCCCCCeEeeccCCCCCEEEcCCCCCCCCcceeeeCCCcccccceEEEE-----------ECCEEEEE
Q 006440 527 NGEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISY-----------KDGAFYLI 595 (645)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~-----------~~~~~~i~ 595 (645)
...|.|....+.. ..+.+.|. . +..++|||++.||+ +++++.|||+||+|.+ .++.|+|+
T Consensus 18 ~~~~~L~v~k~g~-~~~~~~L~-~--~~~~~IGR~~~~di-----~l~~~~VSr~HA~I~~r~~~~~~~~~~~~~~~~l~ 88 (130)
T 4h87_A 18 TAPYSLETLKGGT-ILGTRSLK-G--TSYCLFGRLSGCDV-----CLEHPSVSRYHAVLQHRASGPDGECDSNGPGFYLY 88 (130)
T ss_dssp CSCCEEEEEETTE-EEEEEECT-T--CSEEEEESSTTSSE-----ECCCTTSCSSCEEEEEBCCCCCC------CCEEEE
T ss_pred CCCEEEEEEECCe-eeeeEEeC-C--CceEEEcCCcCCCE-----EeCCCCcchhcEEEEEecccCccceeccCCcceEe
Confidence 3456554433321 22556665 2 33589999999988 9999999999999975 35679999
Q ss_pred ECCCCcceeecCCCCceeecCCCCcEEcCCCCEEEECCCceE
Q 006440 596 DLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKV 637 (645)
Q Consensus 596 D~~S~nGt~vn~~~~~~~~l~~~~~~~l~~gd~i~~g~~~~~ 637 (645)
||+|+|||||||. +|.++++++|++||+|+||.....
T Consensus 89 Dl~StNGT~vNg~-----ri~~~~~~~L~~GD~I~~G~str~ 125 (130)
T 4h87_A 89 DLGSTHGTFLNKT-----RIPPRTYCRVHVGHVVRFGGSTRL 125 (130)
T ss_dssp ECSCSSCEEETTE-----ECCTTCCEECCTTCEEEETTCSEE
T ss_pred eCCCCCceEECCE-----ECCCCceeECCCCCEEEECCceEE
Confidence 9999999999999 999999999999999999987554
No 31
>3va4_A Mediator of DNA damage checkpoint protein 1; cell cycle, FHA domain, DNA-damage, CHK2 and MDC1 dimerizati; HET: TPO; 1.54A {Mus musculus} PDB: 3va1_A* 3umz_A 3unm_A 3unn_A* 3uot_A* 3un0_B
Probab=99.76 E-value=2.4e-18 Score=151.26 Aligned_cols=99 Identities=21% Similarity=0.211 Sum_probs=82.9
Q ss_pred EEEEecCCCCCCCCCeEeeccCCCCCEEEcCCCCCCCCcceeeeCCCcccccceEEEEE--CCEEEEEECCCCcceeecC
Q 006440 530 WFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK--DGAFYLIDLQSEHGTYVTD 607 (645)
Q Consensus 530 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~~--~~~~~i~D~~S~nGt~vn~ 607 (645)
++.+..++. ..++.+.|. .. .++|||.+.|++ +++++.|||+||+|.++ ++.|+|+|++|+||||||+
T Consensus 26 ~L~v~~g~~-~~g~~~~L~-~~---~~~IGR~~~~di-----~l~d~~VSr~HA~i~~~~~~~~~~l~Dl~S~NGT~vNg 95 (132)
T 3va4_A 26 QLRLFSGTH-GPERDFPLY-LG---KNVVGRSPDCSV-----ALPFPSISKQHAVIEISAWNKAPILQDCGSLNGTQIVK 95 (132)
T ss_dssp EEEECCBTT-BSCEEEEEC-SE---EEEEESSTTSSE-----ECCCTTSCTTCEEEEECSTTSCCEEEECSCSSCEEETT
T ss_pred EEEEEeCCC-CCceEEEEC-CC---CEEEccCCCCCE-----EeCCCCcChhHEEEEEEcCCCEEEEEECCCCCCeEECC
Confidence 555554444 355888888 77 899999999988 99999999999999997 6889999999999999999
Q ss_pred CCCceeecCCCCcEEcCCCCEEEECCCceEEeecc
Q 006440 608 NEGRRYRVSSNFPARFRPSDTIEFGSDKKVMNDSL 642 (645)
Q Consensus 608 ~~~~~~~l~~~~~~~l~~gd~i~~g~~~~~~~~~~ 642 (645)
. +++|.+++++.|++||+|+||+. .+.|..+
T Consensus 96 ~---~i~l~~~~~~~L~~GD~I~lG~~-~l~f~~~ 126 (132)
T 3va4_A 96 P---PRVLPPGVSHRLRDQELILFADF-PCQYHRL 126 (132)
T ss_dssp T---TEEECTTCCEECCTTCEEEETTE-EEEEEEC
T ss_pred E---EcccCCCCEEECCCCCEEEECCE-EEEEEEC
Confidence 8 12278888999999999999987 5667543
No 32
>1uht_A Expressed protein; FHA domain, beta-sandwich, antiparallel beta-sheets, phosphopeptide binding motif, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.26.1.2
Probab=99.75 E-value=5e-18 Score=147.41 Aligned_cols=95 Identities=20% Similarity=0.296 Sum_probs=79.0
Q ss_pred cEEEEecCCCCCCCCCeEeeccCCCCCEEEcCC-CCCCCCcceeeeCCCcccccceEEEEECCEEEEEECCCCcceeecC
Q 006440 529 EWFLVPSGSENVVSQPIYLSVSHENEPYLIGSE-SHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTD 607 (645)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iGR~-~~~~~~~~~~~~~~~~vSr~Ha~i~~~~~~~~i~D~~S~nGt~vn~ 607 (645)
.|.|....+. ..++.+.|. . +..++|||. +.|++ +++++.|||+||+|.++++.|+|+|++|+||||||+
T Consensus 12 ~l~L~v~~g~-~~g~~~~l~-~--~~~~~iGR~~~~~di-----~l~d~~vSr~Ha~i~~~~~~~~l~Dl~S~nGT~vng 82 (118)
T 1uht_A 12 SLRLVFVKGP-REGDALDYK-P--GSTIRVGRIVRGNEI-----AIKDAGISTKHLRIESDSGNWVIQDLGSSNGTLLNS 82 (118)
T ss_dssp EEEEEESSST-TTTCBCCBC-T--TCCEEEESSSTTCSE-----ECCSSSSCTTCEEEEECSSSEEEECCCCSSCCEESS
T ss_pred eEEEEEEeCC-CCCcEEEEC-C--CCEEEEcCCCCCCCE-----EeCCCCCchHHeEEEEECCEEEEEECCCCCCeEECC
Confidence 3444443332 234677777 4 237999999 78887 999999999999999999999999999999999999
Q ss_pred CCCceeecCCCCcEEcCCCCEEEECCCceE
Q 006440 608 NEGRRYRVSSNFPARFRPSDTIEFGSDKKV 637 (645)
Q Consensus 608 ~~~~~~~l~~~~~~~l~~gd~i~~g~~~~~ 637 (645)
+ +|.+++++.|++||+|+||.....
T Consensus 83 ~-----~l~~~~~~~L~~gd~i~lG~~~~~ 107 (118)
T 1uht_A 83 N-----ALDPETSVNLGDGDVIKLGEYTSI 107 (118)
T ss_dssp S-----BCCTTCEEECCTTEEEEETTTEEE
T ss_pred E-----ECCCCCeEEcCCCCEEEECCeEEE
Confidence 9 999888999999999999998533
No 33
>3gqs_A Adenylate cyclase-like protein; FHA domain, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.20A {Chlamydia trachomatis}
Probab=99.74 E-value=7.4e-18 Score=143.28 Aligned_cols=97 Identities=21% Similarity=0.407 Sum_probs=79.8
Q ss_pred CCcEEEEecCCCCCCCCCeEeeccCCCCCEEEcCCC-CCCCCcceeeeCCCcccccceEEEEE-CCEEEEEECCCCccee
Q 006440 527 NGEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSES-HEDFSRTSIVIPSAQVSKMHARISYK-DGAFYLIDLQSEHGTY 604 (645)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~-~~~~~~~~~~~~~~~vSr~Ha~i~~~-~~~~~i~D~~S~nGt~ 604 (645)
.+.|.|....+.. .++.+.|. .. ..++|||.+ .|++ +++++.|||+||+|.++ ++.|+|+|++|+||||
T Consensus 2 ~~~~~L~v~~G~~-~g~~~~l~-~~--~~~~iGR~~~~~di-----~l~d~~vSr~Ha~i~~~~~~~~~l~Dl~S~nGt~ 72 (106)
T 3gqs_A 2 PSRFLLKVLAGAN-IGAEFHLD-SG--KTYIVGSDPQVADI-----VLSDMSISRQHAKIIIGNDNSVLIEDLGSKNGVI 72 (106)
T ss_dssp -CEEEEEECC-CC-TTCEEEEC-TT--CEEEEESCTTTCSE-----ECCCTTSCSSCEEEEECTTSCEEEEECSCSSCCE
T ss_pred CceEEEEEEeCCC-CcEEEEEC-CC--CEEEEeECCCcCCE-----EeCCCCcchhhcEEEECCCCcEEEEECcCCCCeE
Confidence 3568777666543 45788888 43 358999999 7888 99999999999999999 7889999999999999
Q ss_pred ecCCCCceeecCCCCcEEcCCCCEEEECCCceEEee
Q 006440 605 VTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKVMND 640 (645)
Q Consensus 605 vn~~~~~~~~l~~~~~~~l~~gd~i~~g~~~~~~~~ 640 (645)
|||+ ++.+ ++.|++||+|+||.. .+.|.
T Consensus 73 vng~-----~i~~--~~~L~~Gd~i~~G~~-~~~~~ 100 (106)
T 3gqs_A 73 VEGR-----KIEH--QSTLSANQVVALGTT-LFLLV 100 (106)
T ss_dssp ETTE-----ECSS--EEECCTTCCEEETTE-EEEEE
T ss_pred ECCE-----ECCC--CeECCCCCEEEECCE-EEEEE
Confidence 9999 8874 579999999999987 45454
No 34
>2pie_A E3 ubiquitin-protein ligase RNF8; FHA domain, complex, ligase, signaling protein; HET: TPO; 1.35A {Homo sapiens} SCOP: b.26.1.2
Probab=99.74 E-value=5.6e-18 Score=151.09 Aligned_cols=95 Identities=18% Similarity=0.275 Sum_probs=82.2
Q ss_pred HhcCCcEEEEecCCCCCCCCCeEeeccCCCCCEEEcCCCCCCCCcceeeeCCCc----ccccceEEEE-ECCEEEEEECC
Q 006440 524 RAMNGEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQ----VSKMHARISY-KDGAFYLIDLQ 598 (645)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~~~~~~~~----vSr~Ha~i~~-~~~~~~i~D~~ 598 (645)
++....|.|+..+... ..+.|. .+..++|||++.|++ +++++. |||.||+|.+ .++.|+|+|++
T Consensus 4 ~~~~~~w~l~~~G~~~---~~~~l~---~~~~~~IGR~~~~di-----~l~~~~~~~~VSr~Ha~i~~~~~g~~~l~Dl~ 72 (138)
T 2pie_A 4 MAGGRSWCLRRVGMSA---GWLLLE---DGCEVTVGRGFGVTY-----QLVSKICPLMISRNHCVLKQNPEGQWTIMDNK 72 (138)
T ss_dssp GGGCEEEEEEETTCSS---CBEEEC---TTCCEEEESSSSSSE-----ECCCSSCTTSSCSSCEEEEECTTSCEEEEECS
T ss_pred CCCCccEEEEEeCCCC---CEEEec---CCCeEEECCCCCCCE-----EeCCCCcCCCCChhHeEEEEcCCCcEEEEECC
Confidence 3455679999987664 467775 233799999999988 999998 9999999999 58889999999
Q ss_pred CCcceeecCCCCceeecCCCCcEEcCCCCEEEECCC
Q 006440 599 SEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSD 634 (645)
Q Consensus 599 S~nGt~vn~~~~~~~~l~~~~~~~l~~gd~i~~g~~ 634 (645)
|+||||||+. +|.+++++.|++||+|+||..
T Consensus 73 S~NGT~vNg~-----~l~~~~~~~L~~GD~I~lG~~ 103 (138)
T 2pie_A 73 SLNGVWLNRA-----RLEPLRVYSIHQGDYIQLGVP 103 (138)
T ss_dssp CSSCEEETTE-----ECCTTCCEECCTTCEEEESCC
T ss_pred CCCCeEECCE-----EcCCCCcEECCCCCEEEECCC
Confidence 9999999999 999999999999999999983
No 35
>2kb3_A Oxoglutarate dehydrogenase inhibitor; forkhead-associated domain, kinase substrate, GARA, FHA, cytoplasm, phosphoprotein; HET: TPO; NMR {Corynebacterium glutamicum} PDB: 2kb4_A
Probab=99.73 E-value=1e-17 Score=149.34 Aligned_cols=97 Identities=23% Similarity=0.372 Sum_probs=80.7
Q ss_pred hcCCcEEEE-ecCCCCCCCCCeEeeccCCCCCEEEcCCCCCCCCcceeeeCCCcccccceEEEEECCEEEEEECCCCcce
Q 006440 525 AMNGEWFLV-PSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGT 603 (645)
Q Consensus 525 ~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~~~~~~~i~D~~S~nGt 603 (645)
.+.+.|.|+ ..+.. .++.+.|. .. .++|||++.|++ +++++.|||+||+|.++++.|+|+|++|+|||
T Consensus 42 ~p~~~~~L~v~~G~~--~g~~~~L~-~~---~~~IGR~~~~di-----~l~d~~VSr~Ha~I~~~~~~~~l~DlgS~NGT 110 (143)
T 2kb3_A 42 LPAGSALLVVKRGPN--AGARFLLD-QP---TTTAGRHPESDI-----FLDDVTVSRRHAEFRINEGEFEVVDVGSLNGT 110 (143)
T ss_dssp CSSSCEEEEEEESTT--TTCEEEEC-SS---EEEESSCTTCSB-----CCCCSSCCSSSEEEEEETTEEEEEESCCSSCC
T ss_pred CCCccEEEEEEeCCC--CCeEEEeC-CC---CeeccCCCCCCE-----EeCCCCcChhhEEEEEECCEEEEEECCCcCCe
Confidence 344455444 44443 34778888 77 899999999988 99999999999999999999999999999999
Q ss_pred eecCCCCceeecCCCCcEEcCCCCEEEECCCceEEeec
Q 006440 604 YVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKVMNDS 641 (645)
Q Consensus 604 ~vn~~~~~~~~l~~~~~~~l~~gd~i~~g~~~~~~~~~ 641 (645)
|||+. ++. ++.|++||+|+||.. .+.|..
T Consensus 111 ~VNg~-----~i~---~~~L~~GD~I~iG~~-~l~f~~ 139 (143)
T 2kb3_A 111 YVNRE-----PRN---AQVMQTGDEIQIGKF-RLVFLA 139 (143)
T ss_dssp EETTE-----ECS---EEECCTTEEEEETTE-EEEEEE
T ss_pred EECCE-----Ecc---eEECCCCCEEEECCE-EEEEEe
Confidence 99999 886 689999999999986 555643
No 36
>2xt9_B Putative signal transduction protein GARA; lyase-signaling protein complex, KDH, KGD; HET: TPP; 2.20A {Mycobacterium smegmatis}
Probab=99.72 E-value=2.3e-17 Score=142.34 Aligned_cols=92 Identities=23% Similarity=0.391 Sum_probs=78.7
Q ss_pred cEEEEecCCCCCCCCCeEeeccCCCCCEEEcCCCCCCCCcceeeeCCCcccccceEEEEECCEEEEEECCCCcceeecCC
Q 006440 529 EWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDN 608 (645)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~~~~~~~i~D~~S~nGt~vn~~ 608 (645)
.++.+..+.. .++.+.|. .. .++|||.+.|++ +++++.|||+||+|.++++.|+|+|++|+||||||+.
T Consensus 12 ~~L~v~~g~~--~g~~~~l~-~~---~~~IGR~~~~di-----~l~d~~vSr~Ha~i~~~~~~~~l~Dl~S~nGt~vng~ 80 (115)
T 2xt9_B 12 ALLVVKRGPN--AGSRFLLD-QP---TTSAGRHPDSDI-----FLDDVTVSRRHAEFRLEGGEFQVVDVGSLNGTYVNRE 80 (115)
T ss_dssp EEEEEEESTT--TTCEEEEC-SS---EEEEESSTTSSE-----ECCSTTSCSSCEEEEEETTEEEEEECSCSSCEEETTE
T ss_pred EEEEEEeCCC--CCeEEEEC-CC---CEEECCCCCCCE-----EeCCcccChhheEEEEECCEEEEEECCCCCCeEECCE
Confidence 4455555544 34778888 76 899999999988 9999999999999999999999999999999999999
Q ss_pred CCceeecCCCCcEEcCCCCEEEECCCceEEee
Q 006440 609 EGRRYRVSSNFPARFRPSDTIEFGSDKKVMND 640 (645)
Q Consensus 609 ~~~~~~l~~~~~~~l~~gd~i~~g~~~~~~~~ 640 (645)
++. ++.|++||+|+||.. .+.|.
T Consensus 81 -----~i~---~~~L~~gd~i~iG~~-~l~~~ 103 (115)
T 2xt9_B 81 -----PVD---SAVLANGDEVQIGKF-RLVFL 103 (115)
T ss_dssp -----ECS---EEEECTTCEEEETTE-EEEEE
T ss_pred -----Ecc---eEECCCCCEEEECCE-EEEEE
Confidence 886 689999999999986 55564
No 37
>3els_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 1.80A {Saccharomyces cerevisiae}
Probab=99.72 E-value=6.4e-18 Score=153.05 Aligned_cols=101 Identities=22% Similarity=0.302 Sum_probs=79.4
Q ss_pred CCcEEEEecCCCC---CCCCCeEeeccCCCCCEEEcCCCC----------CCCCcceeeeCCCcccccceEEEEECCE--
Q 006440 527 NGEWFLVPSGSEN---VVSQPIYLSVSHENEPYLIGSESH----------EDFSRTSIVIPSAQVSKMHARISYKDGA-- 591 (645)
Q Consensus 527 ~~~~~~~~~~~~~---~~~~~~~l~~~~~~~~~~iGR~~~----------~~~~~~~~~~~~~~vSr~Ha~i~~~~~~-- 591 (645)
...|.|+...+.. ...+.+.|. .+..++|||.+. |+...++|+++++.|||+||+|.+.++.
T Consensus 29 ~~~~~l~v~k~g~~~~~~~~~~~L~---~~~~~~IGR~~~~~~~~~~~~~n~~~~~Di~l~~~~VSr~HA~I~~~~~~~~ 105 (158)
T 3els_A 29 RTMYELVIYRKNDKDKGPWKRYDLN---GRSCYLVGRELGHSLDTDLDDRTEIVVADIGIPEETSSKQHCVIQFRNVRGI 105 (158)
T ss_dssp SCCEEEEEEEGGGGGGCCSEEEECS---SCSEEEEEECCCC---------CCCCCCSEEECCTTSCSSCEEEEEEEETTE
T ss_pred CCceEEEEEeCCccCcccceEEEec---CCCceEeccccccccccccccccccccCCEEcCCCCCCcccEEEEEEccCCe
Confidence 4567666553332 133566666 344799999963 4444566699999999999999998554
Q ss_pred --EEEEECCCCcceeecCCCCceeecCCCCcEEcCCCCEEEECCCc
Q 006440 592 --FYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDK 635 (645)
Q Consensus 592 --~~i~D~~S~nGt~vn~~~~~~~~l~~~~~~~l~~gd~i~~g~~~ 635 (645)
|+|+|++|+|||||||. +|.++.+++|++||+|+||...
T Consensus 106 ~~~~l~Dl~StNGT~VNg~-----ri~~~~~~~L~~GD~I~~G~s~ 146 (158)
T 3els_A 106 LKCYVMDLDSSNGTCLNNV-----VIPGARYIELRSGDVLTLSEFE 146 (158)
T ss_dssp EEEEEEECSCSSCCEETTE-----ECCTTCCEECCTTEEEESSSCG
T ss_pred eEEEEEeCCCCCccEECCE-----EcCCCceEEcCCCCEEEECCCC
Confidence 99999999999999999 9999989999999999999654
No 38
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.72 E-value=5.7e-16 Score=160.84 Aligned_cols=297 Identities=12% Similarity=0.017 Sum_probs=144.7
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCC-------cc-cceeeCchHHHHHHhcChhHHHHHHHhc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQ-------YR-GPIQIQSNALAALEAIDLDVAEEVMRAG 148 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~-------~~-~~~~l~~~~~~~l~~l~~g~~~~~~~~~ 148 (645)
.+||+|||||++|+++|+.|+++|++|+|+|+.+.+...... .+ +...+.......++.+ +.+....
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 76 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAV-----KQWQAQG 76 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHH-----HHHHHHT
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHH-----HHHHhCC
Confidence 369999999999999999999999999999997532110000 00 0111222222222222 1121211
Q ss_pred cccc--cccccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeCCeEEEEEc
Q 006440 149 CVTG--DRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLE 226 (645)
Q Consensus 149 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~ 226 (645)
.... ..+. ... .+. +.. .......+........|.+.|.+ +. .++++++|++++.+++++.|++.
T Consensus 77 ~~~~~~~~~~-~~~--~~~----~~~---~~~~~~~~~~~~~~~~l~~~l~~--g~-~i~~~~~v~~i~~~~~~~~v~~~ 143 (336)
T 1yvv_A 77 HVAEWTPLLY-NFH--AGR----LSP---SPDEQVRWVGKPGMSAITRAMRG--DM-PVSFSCRITEVFRGEEHWNLLDA 143 (336)
T ss_dssp SEEEECCCEE-EES--SSB----CCC---CCTTSCEEEESSCTHHHHHHHHT--TC-CEECSCCEEEEEECSSCEEEEET
T ss_pred Ceeeccccce-ecc--Ccc----ccc---CCCCCccEEcCccHHHHHHHHHc--cC-cEEecCEEEEEEEeCCEEEEEeC
Confidence 1100 0000 000 000 000 00000011111223445555554 22 48899999999999999999999
Q ss_pred CCcEEe-ccEEEEccCCchhhhhhhcC------CCCCcccCeEEEEEEeccCCCCccccceEEEecCceEEEEe-----e
Q 006440 227 NGQCYA-GDLLIGADGIWSKVRKNLFG------PQEAIYSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVSS-----D 294 (645)
Q Consensus 227 ~g~~i~-a~lvVgADG~~S~vR~~l~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 294 (645)
+|+.+. +|+||+|||.+|.+|..... .....|... +.....+. .+........+...+...+.+ |
T Consensus 144 ~g~~~~~a~~vV~a~g~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~p 220 (336)
T 1yvv_A 144 EGQNHGPFSHVIIATPAPQASTLLAAAPKLASVVAGVKMDPT--WAVALAFE-TPLQTPMQGCFVQDSPLDWLARNRSKP 220 (336)
T ss_dssp TSCEEEEESEEEECSCHHHHGGGGTTCHHHHHHHTTCCEEEE--EEEEEEES-SCCSCCCCEEEECSSSEEEEEEGGGST
T ss_pred CCcCccccCEEEEcCCHHHHHHhhccCHHHHHHHhhcCccce--eEEEEEec-CCCCCCCCeEEeCCCceeEEEecCcCC
Confidence 997664 99999999999999865311 123344422 21111111 111111222333444333332 2
Q ss_pred cCCCe-EEEEEEEeCC--C-CCCCCCcchHHHHHHHHcCCChhHHHHHHcCCccceeecc----cccCCCCCcc-cCCcE
Q 006440 295 VGAGK-MQWYAFHKEP--A-GGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRD----IYDRTPIFTW-GRGRV 365 (645)
Q Consensus 295 ~~~~~-~~~~~~~~~~--~-~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~-~~~rv 365 (645)
...+. ..|++..... . ......+...+.+++.+....... ..........+|. .+...+...| ..+|+
T Consensus 221 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~~---~~~p~~~~~~rw~~a~~~~~~~~~~~~~~~~rl 297 (336)
T 1yvv_A 221 ERDDTLDTWILHATSQWSRQNLDASREQVIEHLHGAFAELIDCT---MPAPVFSLAHRWLYARPAGAHEWGALSDADLGI 297 (336)
T ss_dssp TCCCSSEEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHTTCSSC---CCCCSEEEEEEEEEEEESSCCCCSCEEETTTTE
T ss_pred CCCCCCcEEEEEeCHHHHHHHHhCCHHHHHHHHHHHHHHHhCCC---CCCCcEEEccccCccCCCCCCCCCeeecCCCCE
Confidence 22222 3344433210 0 000111122233333333321100 0000000111221 1111111122 34899
Q ss_pred EEEccccCcCCCCCcchhhHHHHHHHHHHHHHHHHhhc
Q 006440 366 TLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKK 403 (645)
Q Consensus 366 vLvGDAAH~~~P~~GqG~n~al~Da~~La~~L~~~~~~ 403 (645)
+|+|||+|. .|+|.|++|+..||+.|.+.+..
T Consensus 298 ~laGDa~~g------~gv~~a~~sg~~lA~~l~~~~~~ 329 (336)
T 1yvv_A 298 YVCGDWCLS------GRVEGAWLSGQEAARRLLEHLQL 329 (336)
T ss_dssp EECCGGGTT------SSHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCCCC------CCHHHHHHHHHHHHHHHHHHhhh
Confidence 999999974 49999999999999999987653
No 39
>3po8_A RV0020C protein, putative uncharacterized protein TB39.8; FHA domain, synthetic peptide, peptide binding protein; 1.50A {Mycobacterium tuberculosis} SCOP: b.26.1.0 PDB: 3poa_A* 2lc1_A
Probab=99.71 E-value=1.8e-17 Score=139.40 Aligned_cols=81 Identities=25% Similarity=0.413 Sum_probs=73.3
Q ss_pred CCCeEeeccCCCCCEEEcCCCCCCCCcceeeeCCCcccccceEEEEECCEEEEEECCCCcceeecCCCCceeecCCCCcE
Q 006440 542 SQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPA 621 (645)
Q Consensus 542 ~~~~~l~~~~~~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~~~~~~~i~D~~S~nGt~vn~~~~~~~~l~~~~~~ 621 (645)
++.+.|. .. .++|||++.|++ +++++.|||+||+|.++++.|+|+|++|+||||||+. ++. ++
T Consensus 15 g~~~~l~-~~---~~~IGR~~~~di-----~l~d~~vSr~Ha~i~~~~~~~~l~Dl~S~nGt~vng~-----~i~---~~ 77 (100)
T 3po8_A 15 GRTYQLR-EG---SNIIGRGQDAQF-----RLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNA-----PVQ---EW 77 (100)
T ss_dssp CCEEECC-SE---EEEEESSTTCSE-----ECCCTTSCSSCEEEEECSSCEEEEECSCSSCCEETTE-----ECS---EE
T ss_pred CcEEEEC-CC---CEEEeCCCCCCE-----ECCCCCcChhhCEEEEeCCEEEEEECCCCCCEEECCE-----ECc---eE
Confidence 5778888 77 899999999988 9999999999999999999999999999999999999 875 68
Q ss_pred EcCCCCEEEECCCceEEee
Q 006440 622 RFRPSDTIEFGSDKKVMND 640 (645)
Q Consensus 622 ~l~~gd~i~~g~~~~~~~~ 640 (645)
+|++||+|+||.. .+.|+
T Consensus 78 ~L~~gd~i~iG~~-~~~~~ 95 (100)
T 3po8_A 78 QLADGDVIRLGHS-EIIVR 95 (100)
T ss_dssp ECCTTCEEEETTE-EEEEE
T ss_pred ECCCCCEEEECCE-EEEEE
Confidence 9999999999986 55554
No 40
>2csw_A Ubiquitin ligase protein RNF8; 11-stranded beta sandwich, ring finger protein 8, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.26.1.2
Probab=99.71 E-value=1.2e-17 Score=150.22 Aligned_cols=95 Identities=19% Similarity=0.302 Sum_probs=79.6
Q ss_pred HhcCCcEEEEecCCCCCCCCCeEeeccCCCCCEEEcCCCCCCCCcceeeeCCCc----ccccceEEEEE-CCEEEEEECC
Q 006440 524 RAMNGEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQ----VSKMHARISYK-DGAFYLIDLQ 598 (645)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~~~~~~~~----vSr~Ha~i~~~-~~~~~i~D~~ 598 (645)
++....|+|+..+... ..+.|. ++..++|||.+.|++ +++++. |||+||+|.++ ++.|+|+|++
T Consensus 12 ~~~~~~w~L~~~G~~~---~~~~l~---~~~~~~IGR~~~~di-----~l~~~~~~~~VSr~Ha~i~~~~~g~~~l~Dl~ 80 (145)
T 2csw_A 12 RAGGRSWCLRRVGMSA---GWLLLE---DGCEVTVGRGFGVTY-----QLVSKICPLMISRNHCVLKQNPEGQWTIMDNK 80 (145)
T ss_dssp TTCSEEEEECCTTCSC---CBEECC---TTCCEEEESSTTSSE-----ECCCSSCGGGSCTTCEEEEECTTSCEEEEBSS
T ss_pred CCCCccEEEEEeCCCC---CeEEeC---CCCcEEECCCCCCCE-----EECCCCcCCCCChhHeEEEEcCCCeEEEEECC
Confidence 3445679888444332 456664 233799999999988 999998 99999999995 8889999999
Q ss_pred CCcceeecCCCCceeecCCCCcEEcCCCCEEEECCC
Q 006440 599 SEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSD 634 (645)
Q Consensus 599 S~nGt~vn~~~~~~~~l~~~~~~~l~~gd~i~~g~~ 634 (645)
|+||||||+. +|.++++++|++||+|+||..
T Consensus 81 S~NGT~vNg~-----~i~~~~~~~L~~GD~I~iG~~ 111 (145)
T 2csw_A 81 SLNGVWLNRA-----RLEPLRVYSIHQGDYIQLGVP 111 (145)
T ss_dssp CSSCEEESSC-----BCCBTCCEECCSSCCEEESCC
T ss_pred CCCCeEECCE-----ECCCCccEECCCCCEEEECCC
Confidence 9999999999 999888999999999999984
No 41
>2kfu_A RV1827 PThr 22; FHA domain, phosphorylation, intramolecular interaction, glutamate metabolism, phosphoprotein, protein binding; HET: TPO; NMR {Mycobacterium tuberculosis} PDB: 2kkl_A
Probab=99.70 E-value=5.1e-17 Score=147.45 Aligned_cols=94 Identities=21% Similarity=0.368 Sum_probs=79.1
Q ss_pred CcEEEEecCCCCCCCCCeEeeccCCCCCEEEcCCCCCCCCcceeeeCCCcccccceEEEEECCEEEEEECCCCcceeecC
Q 006440 528 GEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTD 607 (645)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~~~~~~~i~D~~S~nGt~vn~ 607 (645)
..++++..+.. .++.+.|. .. .++|||++.|++ +++++.|||+||+|.++++.|+|+|++|+||||||+
T Consensus 55 ~~~L~v~~G~~--~g~~~~L~-~~---~~~IGR~~~~di-----~l~d~~VSr~HA~I~~~~~~~~l~DlgS~NGT~VNg 123 (162)
T 2kfu_A 55 SALLVVKRGPN--AGSRFLLD-QA---ITSAGRHPDSDI-----FLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNR 123 (162)
T ss_dssp CCEEEEEESTT--CSCEEETT-SS---EEEEESCSSSSE-----ESTTTSSSSCSEEEEEETTEEEEECCCCSSCEEETT
T ss_pred cEEEEEEeCCC--CCeEEEEC-CC---CEEECCCCCCCE-----EECCCCcChhhEEEEEECCEEEEEECCCCCCeEECC
Confidence 34455555544 34677777 66 899999999988 999999999999999999999999999999999999
Q ss_pred CCCceeecCCCCcEEcCCCCEEEECCCceEEeec
Q 006440 608 NEGRRYRVSSNFPARFRPSDTIEFGSDKKVMNDS 641 (645)
Q Consensus 608 ~~~~~~~l~~~~~~~l~~gd~i~~g~~~~~~~~~ 641 (645)
. ++. ++.|++||+|+||.. .+.|..
T Consensus 124 ~-----~i~---~~~L~~GD~I~iG~~-~l~f~~ 148 (162)
T 2kfu_A 124 E-----PVD---SAVLANGDEVQIGKF-RLVFLT 148 (162)
T ss_dssp B-----CCS---EEECCSSCEEEETTE-EEEEEC
T ss_pred E-----Ecc---eEECCCCCEEEECCE-EEEEEe
Confidence 9 875 589999999999986 555643
No 42
>1lgp_A Cell cycle checkpoint protein CHFR; FHA, tungstate, domain swapping; 2.00A {Homo sapiens} SCOP: b.26.1.2 PDB: 1lgq_A
Probab=99.70 E-value=4.8e-17 Score=140.85 Aligned_cols=91 Identities=27% Similarity=0.364 Sum_probs=77.9
Q ss_pred cE-EEEecCCCCCCCCCeEeeccCCCCCEEEcCCCCCCCCcceeeeCCC-cccccceEEEEE--CCEEEEEECCCCccee
Q 006440 529 EW-FLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSA-QVSKMHARISYK--DGAFYLIDLQSEHGTY 604 (645)
Q Consensus 529 ~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~~~~~~~-~vSr~Ha~i~~~--~~~~~i~D~~S~nGt~ 604 (645)
.| .|++..+. ...+.+.|. .. .++|||++.|++ ++++. .|||+||+|.++ ++.|+|+| +|+||||
T Consensus 3 ~wg~L~~~~~~-~~~~~~~l~-~~---~~~iGR~~~~di-----~l~~~~~vSr~Ha~i~~~~~~~~~~l~D-~S~NGt~ 71 (116)
T 1lgp_A 3 PWGRLLRLGAE-EGEPHVLLR-KR---EWTIGRRRGCDL-----SFPSNKLVSGDHCRIVVDEKSGQVTLED-TSTSGTV 71 (116)
T ss_dssp CCEEECCTTCC-SSSCCEEEC-SS---EEEEESSTTSSE-----ECTTCTTSCTTCEEEEECTTTCCEEEEE-CSSSCCC
T ss_pred CEEEEEEeCCC-CCccEEEEC-CC---CEEECCCCCCCE-----EeCCCCCCChhHeEEEEECCCCeEEEEE-CCcCCcE
Confidence 46 45555443 334788888 77 899999999988 99775 999999999997 78899999 9999999
Q ss_pred ecCCCCceeecCCCCcEEcCCCCEEEECCCc
Q 006440 605 VTDNEGRRYRVSSNFPARFRPSDTIEFGSDK 635 (645)
Q Consensus 605 vn~~~~~~~~l~~~~~~~l~~gd~i~~g~~~ 635 (645)
|||. +|.++++++|++||+|.||..+
T Consensus 72 vng~-----~l~~~~~~~L~~GD~i~~G~~~ 97 (116)
T 1lgp_A 72 INKL-----KVVKKQTCPLQTGDVIYLVYRK 97 (116)
T ss_dssp CCCC-----CCCCSSCCCCCTTCEEEEECCS
T ss_pred ECCE-----EcCCCCcEECCCCCEEEEeccC
Confidence 9999 9998889999999999999864
No 43
>1mzk_A Kinase associated protein phosphatase; beta sandwich, hydrolase; NMR {Arabidopsis thaliana} SCOP: b.26.1.2
Probab=99.70 E-value=8.1e-17 Score=143.72 Aligned_cols=89 Identities=25% Similarity=0.408 Sum_probs=75.4
Q ss_pred CCCCeEeeccC--CCCCEEEcCCCCCCCCcceeeeCCCcccccceEEEEECC--EEEEEECCCCcceeecCCCCceeecC
Q 006440 541 VSQPIYLSVSH--ENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDG--AFYLIDLQSEHGTYVTDNEGRRYRVS 616 (645)
Q Consensus 541 ~~~~~~l~~~~--~~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~~~~--~~~i~D~~S~nGt~vn~~~~~~~~l~ 616 (645)
.++.+.|. .. ++..++|||.+.|++ +++++.|||+||+|.++++ .|+|+|++|+||||||+. ++.
T Consensus 18 ~g~~~~l~-~~~~~~~~~~IGR~~~~di-----~l~d~~VSr~Ha~i~~~~~~~~~~l~DlgS~NGT~vNg~-----~i~ 86 (139)
T 1mzk_A 18 IGLQHAVN-STSSSKLPVKLGRVSPSDL-----ALKDSEVSGKHAQITWNSTKFKWELVDMGSLNGTLVNSH-----SIS 86 (139)
T ss_dssp CSCEEEEC-TTCSTTCSEEEESSSSCSE-----ECCCTTSSSEEEEEEEETTTTEEEEEETTCSSCCEETTE-----ESS
T ss_pred CCeEEEec-CCCCccceEEeeCCCCCCE-----EeCCCCCChHHcEEEEECCCCEEEEEECCCCCCEEECCE-----ECc
Confidence 45778887 43 124799999999988 9999999999999999964 799999999999999999 887
Q ss_pred C--------CCcEEcCCCCEEEECCCceEEeec
Q 006440 617 S--------NFPARFRPSDTIEFGSDKKVMNDS 641 (645)
Q Consensus 617 ~--------~~~~~l~~gd~i~~g~~~~~~~~~ 641 (645)
+ +.++.|++||+|+||.... .|..
T Consensus 87 ~~~~~~~~~~~~~~L~~GD~I~iG~~~~-~~~~ 118 (139)
T 1mzk_A 87 HPDLGSRKWGNPVELASDDIITLGTTTK-VYVR 118 (139)
T ss_dssp CCCTTTCCCCCCEECCTTEEEECSSSCE-EEEE
T ss_pred CcccccccCCceEECCCCCEEEECCEEE-EEEE
Confidence 3 6789999999999999844 4543
No 44
>2jpe_A Nuclear inhibitor of protein phosphatase 1; FHA domain, NIPP1, mRNA splicing, transcription; NMR {Mus musculus}
Probab=99.70 E-value=6.9e-18 Score=150.99 Aligned_cols=98 Identities=24% Similarity=0.460 Sum_probs=79.5
Q ss_pred CcEEEEecCCCCCCCCCeEeeccCCCCCEEEcCCCC-CCCCcceeeeCCCcccccceEEEEEC--CEEEEEECCCCccee
Q 006440 528 GEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESH-EDFSRTSIVIPSAQVSKMHARISYKD--GAFYLIDLQSEHGTY 604 (645)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~-~~~~~~~~~~~~~~vSr~Ha~i~~~~--~~~~i~D~~S~nGt~ 604 (645)
..|.|+...+. ...+.+.|. .. ..++|||++. |++ +++++.|||+||+|.+++ +.|+|+|++|+||||
T Consensus 33 ~~~~L~v~~g~-~~g~~~~l~-~~--~~~~IGR~~~~~di-----~l~d~~VSr~Ha~i~~~~~~~~~~l~Dl~S~NGT~ 103 (140)
T 2jpe_A 33 PGLHLDVVKGD-KLIEKLIID-EK--KYYLFGRNPDLCDF-----TIDHQSCSRVHAALVYHKHLKRVFLIDLNSTHGTF 103 (140)
T ss_dssp SSCBEEEESSS-SEEEEECCS-SC--SBCCBSSCTTTSSS-----CCCCSSSCTTSBEEEEBSSSCCEEEECCSCSSCEE
T ss_pred cCEEEEEEcCC-CcceEEEeC-CC--CeEEecCCCccCCE-----EeCCCCcChhheEEEEECCCCcEEEEECCCCCCeE
Confidence 34544444332 233566666 42 2599999998 988 999999999999999997 899999999999999
Q ss_pred ecCCCCceeecCCCCcEEcCCCCEEEECCCceEEee
Q 006440 605 VTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKVMND 640 (645)
Q Consensus 605 vn~~~~~~~~l~~~~~~~l~~gd~i~~g~~~~~~~~ 640 (645)
||+. +|.++.++.|++||+|+||..... |.
T Consensus 104 vNg~-----~l~~~~~~~L~~gd~i~~G~~~~~-f~ 133 (140)
T 2jpe_A 104 LGHI-----RLEPHKPQQIPIDSTVSFGASTRA-YT 133 (140)
T ss_dssp SSSC-----EECSSSCCEECTTCCBBCSSCCCC-BC
T ss_pred ECCE-----ECCCCccEECCCCCEEEECCceEE-EE
Confidence 9999 999988999999999999987433 53
No 45
>1dmz_A Protein (protein kinase SPK1); beta-sandwich, antiparallel beta-sheets, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1fhq_A 1fhr_A* 1j4k_A* 1j4l_A* 1k2m_A* 1k2n_A*
Probab=99.70 E-value=2.8e-17 Score=149.59 Aligned_cols=93 Identities=17% Similarity=0.350 Sum_probs=78.3
Q ss_pred CcEE-EEecCCCCCCCCCeEeeccCCCCCEEEcCCCCCCCCcceeeeCCCcccccceEEEEEC---------------CE
Q 006440 528 GEWF-LVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKD---------------GA 591 (645)
Q Consensus 528 ~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~~~---------------~~ 591 (645)
+.++ |.|..+ ....+.+.|. .. ..+++|||++.|++ +++++.|||.||+|.+++ +.
T Consensus 3 g~~l~L~p~~~-~~~~~~i~L~-~~-~~~~~IGR~~~~di-----~l~d~~VSr~Ha~I~~~~~~~g~~~~~~~~~~~~~ 74 (158)
T 1dmz_A 3 GRFLTLKPLPD-SIIQESLEIQ-QG-VNPFFIGRSEDCNC-----KIEDNRLSRVHCFIFKKRHAVGKSMYESPAQGLDD 74 (158)
T ss_dssp SCCEEEEECTT-SSCCCCEEET-TS-CSCEEEESSTTSSE-----ECCCTTSCSSSEEEEEEECCCCCCCSSCSCSSCEE
T ss_pred ceEEEEEeCCC-CccceEEEEc-CC-CceEEECCCCCCCE-----EeCCCCcChHHeEEEEecCcccccccccccccccc
Confidence 4555 445443 4455788887 54 22499999999988 999999999999999976 78
Q ss_pred EEEEECCCCcceeecCCCCceeecCCCCcEEcCCCCEEEE-----CCC
Q 006440 592 FYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEF-----GSD 634 (645)
Q Consensus 592 ~~i~D~~S~nGt~vn~~~~~~~~l~~~~~~~l~~gd~i~~-----g~~ 634 (645)
|+|+|+ |+|||||||. +|.++.+++|++||+|+| |..
T Consensus 75 ~~l~Dl-StNGT~VNg~-----ri~~~~~~~L~~GD~I~l~~d~~G~~ 116 (158)
T 1dmz_A 75 IWYCHT-GTNVSYLNNN-----RMIQGTKFLLQDGDEIKIIWDKNNKF 116 (158)
T ss_dssp EEEEEC-STTCCEETTE-----ECCSSEEEECCSSCCEESCCCTTTTC
T ss_pred EEEEEC-CcCCeEECCE-----EcCCCceEEcCCCCEEEEeecCCCCE
Confidence 999999 9999999999 999888999999999999 876
No 46
>1gxc_A CHK2, CDS1, serine/threonine-protein kinase CHK2; phosphoprotein-binding domain, checkpoint kinase, transferase; HET: TPO; 2.7A {Homo sapiens} SCOP: b.26.1.2
Probab=99.69 E-value=8.8e-17 Score=145.18 Aligned_cols=98 Identities=18% Similarity=0.249 Sum_probs=78.6
Q ss_pred HhcCCcE-EEEecCCCCCCCCCeEeeccCCCCCEEEcCCCCCCCCcceeeeCCCc---------ccccceEEEEECC---
Q 006440 524 RAMNGEW-FLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQ---------VSKMHARISYKDG--- 590 (645)
Q Consensus 524 ~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~~~~~~~~---------vSr~Ha~i~~~~~--- 590 (645)
+.....| .|++..+. ...+.|. .. .++|||++.|++ +++++. |||+||+|.+.++
T Consensus 24 ~~~~~~w~~L~~~~~~---~~~i~L~-~~---~~~IGR~~~~di-----~l~d~~~~~~~~~~~VSr~Ha~I~~~~~~~~ 91 (149)
T 1gxc_A 24 EPTPAPWARLWALQDG---FANLECV-ND---NYWFGRDKSCEY-----CFDEPLLKRTDKYRTYSKKHFRIFREVGPKN 91 (149)
T ss_dssp -----CCEEEEECSTT---CCCEEEC-SS---EEEEESSTTCSE-----ECCCGGGGGSSGGGGSCTTCEEEEEEECTTS
T ss_pred CCCCCeeEEEEEcCCC---CceEEEC-CC---CEEecCCCCCCE-----EECCccccccccCCcCchhheEEEEECCCCc
Confidence 3444567 45554432 2558888 77 899999999988 999985 9999999999866
Q ss_pred --EEEEEECCCCcceeecCCCCceeecCCCCcEEcCCCCEEEECCCceEEe
Q 006440 591 --AFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKVMN 639 (645)
Q Consensus 591 --~~~i~D~~S~nGt~vn~~~~~~~~l~~~~~~~l~~gd~i~~g~~~~~~~ 639 (645)
.|+|+|+ |+|||||||. +|.++.++.|++||+|.||......|
T Consensus 92 ~~~~~i~D~-StNGT~VNg~-----~i~~~~~~~L~~GD~I~lG~~~~~~f 136 (149)
T 1gxc_A 92 SYIAYIEDH-SGNGTFVNTE-----LVGKGKRRPLNNNSEIALSLSRNKVF 136 (149)
T ss_dssp SEEEEEEEC-CSSCEEETTE-----ECCTTCEEECCTTEEEEESSTTCEEE
T ss_pred eeEEEEEEC-CCCCeEECCE-----ECCCCCeEECCCCCEEEECCCCCeEE
Confidence 8999996 9999999999 99999999999999999999754444
No 47
>3oun_A Putative uncharacterized protein TB39.8; peptidoglycan, Ser/Thr kinase, pseudokinase, FHA domain, REG phosphorylation; HET: TPO; 2.71A {Mycobacterium tuberculosis}
Probab=99.68 E-value=5.2e-17 Score=145.63 Aligned_cols=81 Identities=25% Similarity=0.413 Sum_probs=73.2
Q ss_pred CCCeEeeccCCCCCEEEcCCCCCCCCcceeeeCCCcccccceEEEEECCEEEEEECCCCcceeecCCCCceeecCCCCcE
Q 006440 542 SQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPA 621 (645)
Q Consensus 542 ~~~~~l~~~~~~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~~~~~~~i~D~~S~nGt~vn~~~~~~~~l~~~~~~ 621 (645)
.+.+.|. .. .++|||.++|++ +|+|+.|||.||+|.++++.|+|+|++|+||||||+. +|. ++
T Consensus 77 g~~~~L~-~~---~~~IGR~~~~dI-----~L~d~~VSr~HA~I~~~~~~~~l~DlgStNGT~VNG~-----~i~---~~ 139 (157)
T 3oun_A 77 GRTYQLR-EG---SNIIGRGQDAQF-----RLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNA-----PVQ---EW 139 (157)
T ss_dssp CCEEECC-SE---EEEEESSTTCSE-----ECCCTTSCTTCEEEEECSSCEEEEECSCSSCCEETTE-----ECS---EE
T ss_pred CeEEEEC-CC---cEEEEeCCCCCE-----EeCCCCcChhHEEEEEECCEEEEEECCCCCCeEECCE-----ECc---eE
Confidence 5788888 77 799999999988 9999999999999999999999999999999999999 885 68
Q ss_pred EcCCCCEEEECCCceEEee
Q 006440 622 RFRPSDTIEFGSDKKVMND 640 (645)
Q Consensus 622 ~l~~gd~i~~g~~~~~~~~ 640 (645)
+|++||+|+||.. .+.|+
T Consensus 140 ~L~~GD~I~lG~~-~l~fr 157 (157)
T 3oun_A 140 QLADGDVIRLGHS-EIIVR 157 (157)
T ss_dssp ECCTTCEEEETTE-EEEEC
T ss_pred ECCCCCEEEECCE-EEEEC
Confidence 9999999999986 55553
No 48
>1qu5_A Protein kinase SPK1; FHA, RAD53, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2
Probab=99.68 E-value=4.8e-17 Score=150.92 Aligned_cols=102 Identities=15% Similarity=0.278 Sum_probs=83.5
Q ss_pred hcCCcEEEEecCCCCCCCCCeEeeccCCCCCEEEcCCCCCCCCcceeeeCCCcccccceEEEEEC---------------
Q 006440 525 AMNGEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKD--------------- 589 (645)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~~~--------------- 589 (645)
...+.|+.+.........+.+.|. .. ..+++|||++.|++ +++++.|||.||+|.+.+
T Consensus 24 ~~~g~~l~L~~~~~~~~~~~i~L~-~~-~~~~~IGR~~~~di-----~l~d~~VSr~HA~I~~~~~~~g~~~~e~~~~~~ 96 (182)
T 1qu5_A 24 KGNGRFLTLKPLPDSIIQESLEIQ-QG-VNPFFIGRSEDCNC-----KIEDNRLSRVHCFIFKKRHAVGKSMYESPAQGL 96 (182)
T ss_dssp SSSSCCEEECCCTTSSSCSCCCBT-TC-CSSEEESSSTTSSS-----CCCCTTSCSSCEEEEEECCCCCSSCCSSCCCSC
T ss_pred CCCccEEEEEeCCCCCcceEEEEc-CC-CceEEECCCCCCCE-----EECCCCcChHHeEEEEecCcccccccccccccc
Confidence 445567655544444445777777 44 22499999999998 999999999999999987
Q ss_pred CEEEEEECCCCcceeecCCCCceeecCCCCcEEcCCCCEEEE-----CCCceEEee
Q 006440 590 GAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEF-----GSDKKVMND 640 (645)
Q Consensus 590 ~~~~i~D~~S~nGt~vn~~~~~~~~l~~~~~~~l~~gd~i~~-----g~~~~~~~~ 640 (645)
+.|+|+|+ |+|||||||. +|.++.++.|++||+|+| |.. .+.|+
T Consensus 97 ~~~~l~Dl-StNGT~VNg~-----ri~~~~~~~L~~GD~I~l~~d~~G~~-~l~f~ 145 (182)
T 1qu5_A 97 DDIWYCHT-GTNVSYLNNN-----RMIQGTKFLLQDGDEIKIIWDKNNKF-VIGFK 145 (182)
T ss_dssp CEEEECCC-SSSCCEETTE-----ECCSSEEEECCTTBCCEEEEEGGGTE-EEECC
T ss_pred ceEEEEEC-CcCCeEECCE-----EcCCCcceEcCCCCEEEEEEcCCCCE-EEEEE
Confidence 89999999 9999999999 999888999999999999 876 45553
No 49
>2jqj_A DNA damage response protein kinase DUN1; protein/phosphopeptide, cell cycle; HET: DNA; NMR {Saccharomyces cerevisiae} PDB: 2jql_A*
Probab=99.68 E-value=7.1e-17 Score=146.28 Aligned_cols=85 Identities=21% Similarity=0.378 Sum_probs=73.9
Q ss_pred CCCeEeeccCCCCCEEEcCCCCCCCCcceeeeCCCcccccceEEEE--------ECCEEEEEECCCCcceeecCCCCcee
Q 006440 542 SQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISY--------KDGAFYLIDLQSEHGTYVTDNEGRRY 613 (645)
Q Consensus 542 ~~~~~l~~~~~~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~--------~~~~~~i~D~~S~nGt~vn~~~~~~~ 613 (645)
.+.+.|. . +..++|||.+.|++ +++++.|||.||+|.+ .++.|+|+|+ |+|||||||.
T Consensus 29 g~~~~l~-~--~~~~~IGR~~~~di-----~l~d~~VSr~Ha~I~~~~~~~~~~~~~~~~l~Dl-S~NGT~VNg~----- 94 (151)
T 2jqj_A 29 EQKVEIT-N--RNVTTIGRSRSCDV-----ILSEPDISTFHAEFHLLQMDVDNFQRNLINVIDK-SRNGTFINGN----- 94 (151)
T ss_dssp EEEEEEE-C--CSCEEEESSTTSSE-----ECCCTTCCTTSEEEEEEEEEETTEEEEEEEEEEC-CSSCEEETTE-----
T ss_pred ceEEEEc-C--CCeEEeCCCCCCCE-----EECCCCCccccCEEEEecccCCcCcCCEEEEEEC-CCCCeEECCE-----
Confidence 4677777 4 23899999999988 9999999999999999 7788999999 9999999999
Q ss_pred ecCCCCcEEcCCCCEEEECCCceEEeec
Q 006440 614 RVSSNFPARFRPSDTIEFGSDKKVMNDS 641 (645)
Q Consensus 614 ~l~~~~~~~l~~gd~i~~g~~~~~~~~~ 641 (645)
+|.++ ++.|++||+|.||......|+.
T Consensus 95 ~i~~~-~~~L~~GD~I~lG~~~~~~f~~ 121 (151)
T 2jqj_A 95 RLVKK-DYILKNGDRIVFGKSCSFLFKY 121 (151)
T ss_dssp ECCSS-CEEECSSEEEEETTTEEEEEEE
T ss_pred EcCCC-ceECCCCCEEEECCCcEEEEEE
Confidence 99887 8999999999999953455543
No 50
>3elv_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 2.40A {Saccharomyces cerevisiae} PDB: 2jkd_A
Probab=99.68 E-value=3.3e-17 Score=152.20 Aligned_cols=101 Identities=23% Similarity=0.329 Sum_probs=76.3
Q ss_pred CCcEEEEecCCCC---CCCCCeEeeccCCCCCEEEcCCCCCC----------CCcceeeeCCCcccccceEEEEEC--C-
Q 006440 527 NGEWFLVPSGSEN---VVSQPIYLSVSHENEPYLIGSESHED----------FSRTSIVIPSAQVSKMHARISYKD--G- 590 (645)
Q Consensus 527 ~~~~~~~~~~~~~---~~~~~~~l~~~~~~~~~~iGR~~~~~----------~~~~~~~~~~~~vSr~Ha~i~~~~--~- 590 (645)
...|-|....+.. ..-..+.|. +...++|||++..+ ...++|+|+++.|||+||+|.+.. +
T Consensus 76 ~~~~~L~v~k~g~k~~~~i~~~~L~---~~s~y~IGR~~~~~~~~~~~~~~e~~~cDIvL~dp~VSR~HA~I~~~~~~~~ 152 (205)
T 3elv_A 76 RTMYELVIYRKNDKDKGPWKRYDLN---GRSCYLVGRELGHSLDTDLDDRTEIVVADIGIPEETSSKQHCVIQFRNVRGI 152 (205)
T ss_dssp SCCEEEEEEEGGGCTTCCSEEEECS---SCSEEEEEECCCC---------CCCCCCSEEECCTTSCTTCEEEEEEEETTE
T ss_pred CCceEEEEEeCCCcccccceEEEec---CCCceeecccccccccccccccccCccceEEeCCCCCCcccEEEEEecCCCc
Confidence 3457555543221 123566665 33489999997411 123455999999999999998873 2
Q ss_pred -EEEEEECCCCcceeecCCCCceeecCCCCcEEcCCCCEEEECCCc
Q 006440 591 -AFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDK 635 (645)
Q Consensus 591 -~~~i~D~~S~nGt~vn~~~~~~~~l~~~~~~~l~~gd~i~~g~~~ 635 (645)
.|+|+||+|+|||||||. +|.+..+++|++||+|+||...
T Consensus 153 ~~~~l~DLgStNGTfVNG~-----rI~~~~~~~L~~GD~I~fG~s~ 193 (205)
T 3elv_A 153 LKCYVMDLDSSNGTCLNNV-----VIPGARYIELRSGDVLTLSEFE 193 (205)
T ss_dssp EEEEEEECSCSSCCEETTE-----ECCBTSCEECCTTCEEESSSSG
T ss_pred eeEEEEeCCCCCCCeECCE-----ECCCCceeECCCCCEEEECCCC
Confidence 499999999999999999 9999889999999999999764
No 51
>1r21_A Antigen KI-67; beta sandwich, cell cycle; NMR {Homo sapiens} SCOP: b.26.1.2 PDB: 2aff_A*
Probab=99.67 E-value=7e-17 Score=142.27 Aligned_cols=83 Identities=23% Similarity=0.260 Sum_probs=74.2
Q ss_pred CCCeEeeccCCCCCEEEcCCCCCCCCcceeeeCCCcccccceEEEEECCEEEEEECCCCcceeecCCCCceeecCCCCcE
Q 006440 542 SQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPA 621 (645)
Q Consensus 542 ~~~~~l~~~~~~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~~~~~~~i~D~~S~nGt~vn~~~~~~~~l~~~~~~ 621 (645)
.+.+.|. .. .++|||++.|++ +++++.|||+||+|.++++.|+|+|++|+||||||+. ++. +++
T Consensus 25 g~~~~l~-~~---~~~IGR~~~~di-----~l~d~~VSr~Ha~i~~~~~~~~l~Dl~S~nGt~vNg~-----~i~--~~~ 88 (128)
T 1r21_A 25 GPHFPLS-LS---TCLFGRGIECDI-----RIQLPVVSKQHCKIEIHEQEAILHNFSSTNPTQVNGS-----VID--EPV 88 (128)
T ss_dssp EEEEECC-SS---EEEEESSTTSSE-----ECCCTTSCTTCEEEEECSSCEEECCCCSSSCCEETTE-----ECS--SCE
T ss_pred ceEEEEC-CC---CEEECCCCCCCE-----EECCCCCChhHEEEEEECCEEEEEECCCCCCEEECCE-----ECC--CcE
Confidence 4677887 66 899999999988 9999999999999999999999999999999999999 886 478
Q ss_pred EcCCCCEEEECCCceEEeec
Q 006440 622 RFRPSDTIEFGSDKKVMNDS 641 (645)
Q Consensus 622 ~l~~gd~i~~g~~~~~~~~~ 641 (645)
.|++||+|+||.. .+.|..
T Consensus 89 ~L~~Gd~i~iG~~-~~~~~~ 107 (128)
T 1r21_A 89 RLKHGDVITIIDR-SFRYEN 107 (128)
T ss_dssp ECCTTEEEECSSC-EEEEEE
T ss_pred EcCCCCEEEECCE-EEEEEe
Confidence 9999999999976 565654
No 52
>3hx1_A SLR1951 protein; P74513_SYNY3, adenylate cyclase-like protein, NESG, structural genomics, PSI-2, protein structure initiative; 2.50A {Synechocystis SP}
Probab=99.67 E-value=1.4e-16 Score=140.17 Aligned_cols=84 Identities=27% Similarity=0.381 Sum_probs=72.3
Q ss_pred CCCeEeeccCCCCCEEEcCCCCCCCCcceeeeCCCcccccceEEEEE---CC--EEEEEEC-----CCCcceeecCCCCc
Q 006440 542 SQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK---DG--AFYLIDL-----QSEHGTYVTDNEGR 611 (645)
Q Consensus 542 ~~~~~l~~~~~~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~~---~~--~~~i~D~-----~S~nGt~vn~~~~~ 611 (645)
.+.+.|. .. .++|||++.|++ +++++.|||.||+|.+. ++ .|+|+|+ +|+|||||||.
T Consensus 22 ~~~~~l~-~~---~~~IGR~~~~di-----~l~d~~VSr~Ha~I~~~~~~~g~~~~~l~Dl~~~~~~S~NGT~vNg~--- 89 (131)
T 3hx1_A 22 RREVLLT-ET---FYTIGRSPRADI-----RIKSQFVSRIHAVLVRKSSDDVQAAYRIIDGDEDGQSSVNGLMINGK--- 89 (131)
T ss_dssp EEEEEEC-SS---EEEEESSTTSSE-----ECCCSSSCTTCEEEEEC------CCEEEEESCTTSCCCSSCEEETTE---
T ss_pred cEEEEEC-CC---CEEECCCCCCCE-----EECCCCcChhheEEEEEccCCCceEEEEEECCCCCCCCCCceEECCE---
Confidence 4677777 66 899999999988 99999999999999986 23 4999999 79999999999
Q ss_pred eeecCCCCcEEcCCCCEEEECCCceEEeecc
Q 006440 612 RYRVSSNFPARFRPSDTIEFGSDKKVMNDSL 642 (645)
Q Consensus 612 ~~~l~~~~~~~l~~gd~i~~g~~~~~~~~~~ 642 (645)
++.+ +.|++||+|+||....+.|..+
T Consensus 90 --~i~~---~~L~~GD~I~iG~~~~~~~~~~ 115 (131)
T 3hx1_A 90 --KVQE---HIIQTGDEIVMGPQVSVRYEYR 115 (131)
T ss_dssp --EESE---EECCTTCEEECSTTCEEEEEEE
T ss_pred --EeEe---EECCCCCEEEECCEEEEEEEEe
Confidence 8863 8999999999999977766543
No 53
>1wln_A Afadin; beta sandwich, FHA domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.26.1.2
Probab=99.65 E-value=6e-16 Score=134.42 Aligned_cols=84 Identities=14% Similarity=0.201 Sum_probs=73.0
Q ss_pred CCCeEeeccCCCCCEEEcC--CCCCCCCcceeeeCCCcccccceEEEEECCEEEEEECCCCcceeecCCCCceeecCCCC
Q 006440 542 SQPIYLSVSHENEPYLIGS--ESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNF 619 (645)
Q Consensus 542 ~~~~~l~~~~~~~~~~iGR--~~~~~~~~~~~~~~~~~vSr~Ha~i~~~~~~~~i~D~~S~nGt~vn~~~~~~~~l~~~~ 619 (645)
...+.|. .. .++||| .+.|++ +++++.|||+||+|.++++.|+|+|++|+|||||||+ ++. +
T Consensus 28 ~~~~~L~-~~---~~~IGr~r~~~~di-----~l~~~~vSr~Ha~i~~~~~~~~l~dl~S~ngt~vNg~-----~i~--~ 91 (120)
T 1wln_A 28 PKLYRLQ-LS---VTEVGTEKFDDNSI-----QLFGPGIQPHHCDLTNMDGVVTVTPRSMDAETYVDGQ-----RIS--E 91 (120)
T ss_dssp CCEEECC-SE---EEECSSSCCSTTCC-----CCCCTTCCSSCEEEEESSSCEEEEESCSSSCEEETSC-----BCS--S
T ss_pred cEEEEEC-CC---CEEECCCCCCCCcE-----EECCCCCchhheEEEEcCCEEEEEECCCCCCEEECCE-----EcC--C
Confidence 4667777 66 799996 467777 9999999999999999999999999999999999999 886 5
Q ss_pred cEEcCCCCEEEECCCceEEeec
Q 006440 620 PARFRPSDTIEFGSDKKVMNDS 641 (645)
Q Consensus 620 ~~~l~~gd~i~~g~~~~~~~~~ 641 (645)
++.|++||+|+||....+.|..
T Consensus 92 ~~~L~~GD~I~iG~~~~~~f~~ 113 (120)
T 1wln_A 92 TTMLQSGMRLQFGTSHVFKFVD 113 (120)
T ss_dssp CEEECTTCEEEETTTEEEEEEC
T ss_pred CEECCCCCEEEECCceEEEEEC
Confidence 6899999999999965666643
No 54
>1g6g_A Protein kinase RAD53; beta-sandwich, phosphopeptide complex, cell cycle; HET: TPO; 1.60A {Saccharomyces cerevisiae} SCOP: b.26.1.2
Probab=99.62 E-value=6.7e-16 Score=135.58 Aligned_cols=70 Identities=24% Similarity=0.421 Sum_probs=65.6
Q ss_pred CEEEcCCCCCCCCcceeeeCCC-cccccceEEEE-ECCEEEEEECCCCcceeecCCCCceeecCCCCcEEcCCCCEEEEC
Q 006440 555 PYLIGSESHEDFSRTSIVIPSA-QVSKMHARISY-KDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFG 632 (645)
Q Consensus 555 ~~~iGR~~~~~~~~~~~~~~~~-~vSr~Ha~i~~-~~~~~~i~D~~S~nGt~vn~~~~~~~~l~~~~~~~l~~gd~i~~g 632 (645)
.++|||++.|++ +++++ .|||.||+|.+ .++.|+|+|+ |+|||||||. ++.+++++.|++||+|+||
T Consensus 37 ~~~IGR~~~~di-----~l~~~~~vSr~Ha~i~~~~~g~~~l~Dl-S~NGT~vNg~-----~l~~~~~~~L~~Gd~I~lG 105 (127)
T 1g6g_A 37 VWTFGRNPACDY-----HLGNISRLSNKHFQILLGEDGNLLLNDI-STNGTWLNGQ-----KVEKNSNQLLSQGDEITVG 105 (127)
T ss_dssp EEEEESSTTSSE-----ECCSCTTSCSSCEEEEECTTSCEEEEEC-CSSCCEETTE-----ECCTTCCEECCTTCEEEEC
T ss_pred CEEECCCCCCCE-----EeCCCCCCChhHeEEEECCCCcEEEEEC-CcCCeEECCE-----EcCCCCeEEcCCCCEEEEC
Confidence 799999999988 99997 69999999999 4889999999 9999999999 9999889999999999999
Q ss_pred CCc
Q 006440 633 SDK 635 (645)
Q Consensus 633 ~~~ 635 (645)
...
T Consensus 106 ~~~ 108 (127)
T 1g6g_A 106 VGV 108 (127)
T ss_dssp TTS
T ss_pred CCc
Confidence 864
No 55
>1g3g_A Protien kinase SPK1; FHA domain, RAD53, phosphopeptide, phosphoprotein, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1j4o_A 1j4p_A* 1j4q_A* 1k3j_A 1k3n_A* 1k3q_A* 2a0t_A* 2jqi_A*
Probab=99.61 E-value=9.2e-16 Score=140.61 Aligned_cols=95 Identities=19% Similarity=0.292 Sum_probs=76.0
Q ss_pred CCcEEEEecCCCCCCCCCeEeeccC--------CCCCEEEcCCCCCCCCcceeeeCCC-cccccceEEEEE-CCEEEEEE
Q 006440 527 NGEWFLVPSGSENVVSQPIYLSVSH--------ENEPYLIGSESHEDFSRTSIVIPSA-QVSKMHARISYK-DGAFYLID 596 (645)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~l~~~~--------~~~~~~iGR~~~~~~~~~~~~~~~~-~vSr~Ha~i~~~-~~~~~i~D 596 (645)
...|.|+...+. ..+..+.|. .. ....++|||++.|++ +++++ .|||.||+|.++ ++.|+|+|
T Consensus 31 ~~~~~L~v~~G~-~~g~~~~l~-~~~v~~~~~~~~~~~~IGR~~~~di-----~l~d~~~vSr~Ha~I~~~~~g~~~l~D 103 (164)
T 1g3g_A 31 NIVCRVICTTGQ-IPIRDLSAD-ISQVLKEKRSIKKVWTFGRNPACDY-----HLGNISRLSNKHFQILLGEDGNLLLND 103 (164)
T ss_dssp SCCEEEECSSSS-SCCEEECCC-HHHHHHCSSSCCEEEEEESSSSSSE-----ECCCCTTTTSSCEEEEECSTTCEEEEE
T ss_pred CccEEEEEecCC-CCCeEEEec-cccccccccccCCcEEECCCCCCCE-----EeCCcCCcChhHEEEEECCCCCEEEEE
Confidence 345656555433 233455554 21 122689999999988 99997 699999999995 89999999
Q ss_pred CCCCcceeecCCCCceeecCCCCcEEcCCCCEEEECCC
Q 006440 597 LQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSD 634 (645)
Q Consensus 597 ~~S~nGt~vn~~~~~~~~l~~~~~~~l~~gd~i~~g~~ 634 (645)
+ |+|||||||. +|.++.++.|++||+|.||..
T Consensus 104 l-S~NGT~vNg~-----~i~~~~~~~L~~GD~I~iG~~ 135 (164)
T 1g3g_A 104 I-STNGTWLNGQ-----KVEKNSNQLLSQGDEITVGVG 135 (164)
T ss_dssp C-CSSCEEETTE-----EECTTEEEECCTTCEEEESCS
T ss_pred C-CCCCeEECCE-----EcCCCCceEcCCCCEEEECCC
Confidence 9 9999999999 999888899999999999986
No 56
>3fm8_A Kinesin-like protein KIF13B; kinesin, GAP, GTPase activation, structural genomics consort ATP-binding, cytoskeleton, microtubule, motor protein, NUCL binding; 2.30A {Homo sapiens} PDB: 3mdb_A*
Probab=99.54 E-value=3.1e-14 Score=122.86 Aligned_cols=97 Identities=21% Similarity=0.328 Sum_probs=77.2
Q ss_pred CcEEEEecCCCCCCCCCeEeeccCCCCCEEEcCCCCCCCCcceeeeCCCcccccceEEEEE-CCEEEEEECCCCcceeec
Q 006440 528 GEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK-DGAFYLIDLQSEHGTYVT 606 (645)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~~-~~~~~i~D~~S~nGt~vn 606 (645)
..-.|+...+++..+..+...|.+ ..+|||.++||+ +|+++.|||+||+|... ++.|+|+|++ +||||||
T Consensus 25 ~~PhLvnLn~Dp~~s~~l~y~L~~---~t~IGR~~~~DI-----~L~~~~Vs~~Ha~I~~~~~g~~~l~dl~-~ngt~VN 95 (124)
T 3fm8_A 25 DKCFLVNLNADPALNELLVYYLKE---HTLIGSANSQDI-----QLCGMGILPEHCIIDITSEGQVMLTPQK-NTRTFVN 95 (124)
T ss_dssp --CEEEETTCCTTSSCCCEEECCS---EEEEESSTTCSE-----ECCSTTCCSSCEEEEECTTSCEEEEECT-TCCEEET
T ss_pred CccEEEEeCCCCccCceEEEECCC---CeEECCCCCCCE-----EECCCCeecceEEEEECCCCeEEEEECC-CCCEEEC
Confidence 344666666665555444444344 589999999888 99999999999999994 8889999995 7999999
Q ss_pred CCCCceeecCCCCcEEcCCCCEEEECCCceEEee
Q 006440 607 DNEGRRYRVSSNFPARFRPSDTIEFGSDKKVMND 640 (645)
Q Consensus 607 ~~~~~~~~l~~~~~~~l~~gd~i~~g~~~~~~~~ 640 (645)
|+ +|. ++++|++||+|.||....+.|.
T Consensus 96 G~-----~V~--~~~~L~~GD~I~lG~~~~FrFn 122 (124)
T 3fm8_A 96 GS-----SVS--SPIQLHHGDRILWGNNHFFRLN 122 (124)
T ss_dssp TE-----ECC--SCEEECTTCEEEETTTEEEEEE
T ss_pred CE-----EcC--CcEECCCCCEEEECCCeEEEEE
Confidence 99 886 5789999999999988666553
No 57
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=99.49 E-value=3.2e-14 Score=150.28 Aligned_cols=83 Identities=24% Similarity=0.299 Sum_probs=74.8
Q ss_pred CCCeEeeccCCCCCEEEcCCCCCCCCcceeeeCCCcccccceEEEEECCEEEEEECCCCcceeecCCCCceeecCCCCcE
Q 006440 542 SQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPA 621 (645)
Q Consensus 542 ~~~~~l~~~~~~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~~~~~~~i~D~~S~nGt~vn~~~~~~~~l~~~~~~ 621 (645)
++.+.|. .. .++|||+++|++ +++++.|||+||+|.++++.|+|+|++|+|||||||. ++. .++
T Consensus 298 g~~~~l~-~~---~~~iGR~~~~di-----~l~~~~vSr~Ha~i~~~~~~~~l~Dl~S~nGt~vng~-----~i~--~~~ 361 (388)
T 2ff4_A 298 GRGYPLQ-AA---ATRIGRLHDNDI-----VLDSANVSRHHAVIVDTGTNYVINDLRSSNGVHVQHE-----RIR--SAV 361 (388)
T ss_dssp CCEEECC-SS---EEEEESSTTSSE-----ECCCTTSCTTCEEEEECSSCEEEEECSCSSCCEETTE-----ECS--SEE
T ss_pred CcEEEEC-CC---CEEEecCCCCeE-----EECCCccChhHeEEEEECCEEEEEECCCCCCeEECCE-----ECC--Cce
Confidence 3778888 77 899999999988 9999999999999999999999999999999999999 884 579
Q ss_pred EcCCCCEEEECCCceEEeec
Q 006440 622 RFRPSDTIEFGSDKKVMNDS 641 (645)
Q Consensus 622 ~l~~gd~i~~g~~~~~~~~~ 641 (645)
.|++||+|+||.. .+.|..
T Consensus 362 ~L~~gd~i~~G~~-~~~~~~ 380 (388)
T 2ff4_A 362 TLNDGDHIRICDH-EFTFQI 380 (388)
T ss_dssp EECTTCEEEETTE-EEEEEC
T ss_pred ECCCCCEEEECCE-EEEEEe
Confidence 9999999999986 565654
No 58
>4ejq_A Kinesin-like protein KIF1A; homodimer, FHA domain, transport protein; 1.89A {Homo sapiens} PDB: 2eh0_A 2g1l_A
Probab=99.48 E-value=1.5e-13 Score=124.23 Aligned_cols=95 Identities=19% Similarity=0.295 Sum_probs=73.6
Q ss_pred EEEEecCCCCCCCCCe--EeeccCCCCCEEEcCCC---CCCCCcceeeeCCCcccccceEEEEECC----EEEEEECCCC
Q 006440 530 WFLVPSGSENVVSQPI--YLSVSHENEPYLIGSES---HEDFSRTSIVIPSAQVSKMHARISYKDG----AFYLIDLQSE 600 (645)
Q Consensus 530 ~~~~~~~~~~~~~~~~--~l~~~~~~~~~~iGR~~---~~~~~~~~~~~~~~~vSr~Ha~i~~~~~----~~~i~D~~S~ 600 (645)
-.|+...+++..+..+ .|. .+ .++|||.+ .||+ +++++.|||+||.|.++++ .+++.|++|+
T Consensus 39 PhLvnLn~Dp~ls~~lvy~L~-~g---~t~IGR~~~~~~~DI-----~L~~~~Vs~~H~~i~~~~~~~~~~~~~~d~~S~ 109 (154)
T 4ejq_A 39 PHLVNLNEDPLMSECLLYYIK-DG---ITRVGREDGERRQDI-----VLSGHFIKEEHCVFRSDSRGGSEAVVTLEPCEG 109 (154)
T ss_dssp CEEEECCCCTTCSSEEEEECC-SE---EEEEECSSCSSCCSE-----ECCCTTCCSEEEEEEEECTTSSSCEEEEEECTT
T ss_pred ceEEEecCCcccCceEEEEeC-CC---CEEEcCCCCCCCCCE-----EECCCCcccccEEEEEecCCCceeEEEEecCCC
Confidence 4555555555443333 333 44 79999987 4555 9999999999999999853 5899999999
Q ss_pred cceeecCCCCceeecCCCCcEEcCCCCEEEECCCceEEee
Q 006440 601 HGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKVMND 640 (645)
Q Consensus 601 nGt~vn~~~~~~~~l~~~~~~~l~~gd~i~~g~~~~~~~~ 640 (645)
|||||||. +|. +++.|++||+|.||....+.|.
T Consensus 110 ngt~VNG~-----~i~--~~~~L~~GD~I~~G~~~~Frf~ 142 (154)
T 4ejq_A 110 ADTYVNGK-----KVT--EPSILRSGNRIIMGKSHVFRFN 142 (154)
T ss_dssp CCEEETTE-----ECC--SCEECCTTCEEEETTTEEEEEE
T ss_pred CceEECCE-----EcC--CceECCCCCEEEECCcEEEEEc
Confidence 99999999 885 5789999999999987555554
No 59
>3huf_A DNA repair and telomere maintenance protein NBS1; NBS1, FHA domain, BRCT domain, phosphoprotein binding, phosp binding, DNA repair; HET: DNA TPO; 2.15A {Schizosaccharomyces pombe} PDB: 3hue_A* 3i0m_A* 3i0n_A*
Probab=99.47 E-value=9.6e-14 Score=135.89 Aligned_cols=95 Identities=24% Similarity=0.387 Sum_probs=75.9
Q ss_pred cEEEEecCCCCCCCCCeEeeccCCCCCEEEcCCCCCCCCcceeeeCCCcccccceEEEEEC-----------CEEEEEEC
Q 006440 529 EWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKD-----------GAFYLIDL 597 (645)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~~~-----------~~~~i~D~ 597 (645)
.|+|.+.++- ..++++.|. .+ .++|||...++. ..|+++|++|||+||+|.++. ..++|+||
T Consensus 1 MWiL~~~~d~-~~Gkr~~L~-pg---~YlIGR~~~~~~--~lI~idD~SISRqHA~I~v~~v~~~dg~~~~~~~l~I~DL 73 (325)
T 3huf_A 1 MWIIEAEGDI-LKGKSRILF-PG---TYIVGRNVSDDS--SHIQVISKSISKRHARFTILTPSEKDYFTGGPCEFEVKDL 73 (325)
T ss_dssp CEEEEESTTT-TTTCCEEEC-SE---EEEEESSCCCBT--TEEECCCTTSCSSCEEEEECCCCHHHHHHCCCCCEEEEEC
T ss_pred CcEEeccCcc-CCCeEEEec-CC---eEEECCCCCccC--ceeecCCCCccccceEEEEecccccccccCCcceEEEEEC
Confidence 4999996542 345889998 77 699999988642 122789999999999999862 37999999
Q ss_pred CCCcceeecCCCCceeecCCCCcEEc-CCCCEEEECCCce
Q 006440 598 QSEHGTYVTDNEGRRYRVSSNFPARF-RPSDTIEFGSDKK 636 (645)
Q Consensus 598 ~S~nGt~vn~~~~~~~~l~~~~~~~l-~~gd~i~~g~~~~ 636 (645)
+|+|||||||. ++.+. ...| .+||.|+||..+.
T Consensus 74 gSknGTfVNGe-----rI~~~-~~~L~~dgd~I~fG~~~~ 107 (325)
T 3huf_A 74 DTKFGTKVNEK-----VVGQN-GDSYKEKDLKIQLGKCPF 107 (325)
T ss_dssp SCSSCEEETTE-----ECCTT-CEEECSSEEEEEETTCSS
T ss_pred CCCCCEEECCE-----ECCCc-eeeecCCCCEEEecCCcc
Confidence 99999999999 99654 4455 5899999998744
No 60
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.45 E-value=4.1e-13 Score=141.83 Aligned_cols=194 Identities=12% Similarity=0.042 Sum_probs=103.4
Q ss_pred EeeCHHHHHHHHHHHcC--CceEEcCceEEEEEeeCCeEEEEEcCCcEEeccEEEEccCCchh-hhhhhcCCCCCcccCe
Q 006440 185 RVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK-VRKNLFGPQEAIYSGY 261 (645)
Q Consensus 185 ~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a~lvVgADG~~S~-vR~~l~~~~~~~~~~~ 261 (645)
..++...+.+.|.+.+. ...++.+++|++++.+++++.|++.+| +++||.||.|+|.+|. +.+.+. ...+.+. .
T Consensus 159 ~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~s~~l~~~~~-~~~~~~~-~ 235 (382)
T 1ryi_A 159 VHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVWSGMFFKQLG-LNNAFLP-V 235 (382)
T ss_dssp CBCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGGTHHHHHHTT-CCCCCEE-E
T ss_pred eEEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChhHHHHHHhcC-CCCceec-c
Confidence 45777888888877652 235888999999998888888888777 8999999999999987 666552 1111111 1
Q ss_pred EEEEEEeccCCCCccccceEEEecCceEEEEeecCCCeEEEEEEEeCCCCCCCCCcchHHHHHHHHcCCChhHHHHHHcC
Q 006440 262 TCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILAT 341 (645)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~ 341 (645)
.............. ...++ ... .+..|..++.+.+..................+.+++.+..+.|.+.
T Consensus 236 ~g~~~~~~~~~~~~---~~~~~-~~~--~~~~p~~~g~~~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~l~------ 303 (382)
T 1ryi_A 236 KGECLSVWNDDIPL---TKTLY-HDH--CYIVPRKSGRLVVGATMKPGDWSETPDLGGLESVMKKAKTMLPAIQ------ 303 (382)
T ss_dssp EEEEEEEECCSSCC---CSEEE-ETT--EEEEECTTSEEEEECCCEETCCCCSCCHHHHHHHHHHHHHHCGGGG------
T ss_pred ceEEEEECCCCCCc---cceEE-cCC--EEEEEcCCCeEEEeecccccCCCCCCCHHHHHHHHHHHHHhCCCcC------
Confidence 11111111111111 11122 222 2223444444333221111111111122223344444333333211
Q ss_pred Ccccee-ecccccCCCCCcccCCcEEEEcccc-----CcCCCCCcchhhHHHHHHHHHHHHHHH
Q 006440 342 DEEAIL-RRDIYDRTPIFTWGRGRVTLLGDSV-----HAMQPNLGQGGCMAIEDGYQLAVELEK 399 (645)
Q Consensus 342 ~~~~~~-~~~~~~~~~~~~~~~~rvvLvGDAA-----H~~~P~~GqG~n~al~Da~~La~~L~~ 399 (645)
...+. .|. ....+..++..++|++. +...++.|.|+.+|...+..|++.|..
T Consensus 304 -~~~~~~~w~-----g~~~~t~d~~p~ig~~~~~~~l~~~~G~~g~G~~~a~~~g~~la~~i~~ 361 (382)
T 1ryi_A 304 -NMKVDRFWA-----GLRPGTKDGKPYIGRHPEDSRILFAAGHFRNGILLAPATGALISDLIMN 361 (382)
T ss_dssp -GSEEEEEEE-----EEEEECSSSCCEEEEETTEEEEEEEECCSSCTTTTHHHHHHHHHHHHTT
T ss_pred -CCceeeEEE-----EecccCCCCCcEeccCCCcCCEEEEEcCCcchHHHhHHHHHHHHHHHhC
Confidence 11111 111 01123456677888763 446788999999999988888887753
No 61
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.39 E-value=5.3e-12 Score=134.34 Aligned_cols=65 Identities=15% Similarity=0.140 Sum_probs=50.1
Q ss_pred EeeCHHHHHHHHHHHcC--CceEEcCceEEEEEeeCCe-EEEEEcCCcEEeccEEEEccCCch-hhhhhh
Q 006440 185 RVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDK-VSVVLENGQCYAGDLLIGADGIWS-KVRKNL 250 (645)
Q Consensus 185 ~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~-v~v~~~~g~~i~a~lvVgADG~~S-~vR~~l 250 (645)
..++...+.+.|.+.+. ...++.+++|+++..+++. +.|++.+| +++||.||.|+|.+| .+++.+
T Consensus 169 ~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~l~~~~ 237 (405)
T 2gag_B 169 GIAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHSSVLAEMA 237 (405)
T ss_dssp BBCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhHHHHHHHc
Confidence 34666778777777652 2358889999999987665 45777777 799999999999998 677665
No 62
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.37 E-value=3.3e-12 Score=134.90 Aligned_cols=65 Identities=12% Similarity=0.210 Sum_probs=51.7
Q ss_pred EeeCHHHHHHHHHHHcC--CceEEcCceEEEEEeeCCeEE-EEEcCCcEEeccEEEEccCCch-hhhhhh
Q 006440 185 RVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVS-VVLENGQCYAGDLLIGADGIWS-KVRKNL 250 (645)
Q Consensus 185 ~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~-v~~~~g~~i~a~lvVgADG~~S-~vR~~l 250 (645)
..++...+.+.|.+.+. ...++.+++|++++.+++.+. |++.+| +++||.||.|+|.+| .+.+.+
T Consensus 144 ~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s~~l~~~~ 212 (382)
T 1y56_B 144 GKADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWANLINAMA 212 (382)
T ss_dssp CEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGHHHHHHHH
T ss_pred eeECHHHHHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhHHHHHHHc
Confidence 35778888888877652 235888999999998888887 888777 799999999999998 455554
No 63
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.35 E-value=4.9e-12 Score=126.26 Aligned_cols=35 Identities=34% Similarity=0.522 Sum_probs=32.8
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (645)
.+||+||||||+||+||+.|+++|++|+|+||.+.
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~ 36 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRG 36 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 47999999999999999999999999999999754
No 64
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.32 E-value=6.3e-11 Score=134.62 Aligned_cols=62 Identities=11% Similarity=0.062 Sum_probs=52.6
Q ss_pred EEeeCHHHHHHHHHHHcC--CceEEcCceEEEEEeeCCeEEEEEcCCcEEeccEEEEccCCchh
Q 006440 184 TRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK 245 (645)
Q Consensus 184 ~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a~lvVgADG~~S~ 245 (645)
+..++...+.+.|.+.+. ...++++++|+++..++++|.|++.+|.+++||.||.|+|.+|.
T Consensus 411 ~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s~ 474 (676)
T 3ps9_A 411 GGWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQIS 474 (676)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGGG
T ss_pred CeeeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcchh
Confidence 456788888888887652 23588899999999999999999988888999999999999986
No 65
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.32 E-value=1.7e-11 Score=139.60 Aligned_cols=62 Identities=11% Similarity=0.018 Sum_probs=51.0
Q ss_pred EEeeCHHHHHHHHHHHcC--CceEEcCceEEEEEeeCCeEEEEEcCCc-EEeccEEEEccCCchh
Q 006440 184 TRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQ-CYAGDLLIGADGIWSK 245 (645)
Q Consensus 184 ~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~v~~~~g~-~i~a~lvVgADG~~S~ 245 (645)
...++...+.+.|.+.+. ...++++++|++++.+++++.|++.+|+ +++||.||.|+|.+|.
T Consensus 406 ~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 406 GGWLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHRLP 470 (689)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGGTT
T ss_pred CeEECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcchh
Confidence 346778888888887652 2358889999999998888999998887 8999999999999985
No 66
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.30 E-value=3.5e-11 Score=127.20 Aligned_cols=166 Identities=16% Similarity=0.189 Sum_probs=92.4
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccc--cCCCCccccee--e--CchHHHH-HHhcChhHHHHHHHhcc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAI--RGEGQYRGPIQ--I--QSNALAA-LEAIDLDVAEEVMRAGC 149 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~--~~~g~~~~~~~--l--~~~~~~~-l~~l~~g~~~~~~~~~~ 149 (645)
.+||+|||||++|+++|+.|+++|++|+|+|+..... ..++...+.+. . .+...++ .+.+ .+++++.+...
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~l~~~~~ 80 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPHTNGSHHGDTRIIRHAYGEGREYVPLALRSQ--ELWYELEKETH 80 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSSCSSSSSCSSEEEECSSCTTCGGGHHHHHHHH--HHHHHHHHHCS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCcchhhhhhhcCCchHHHHHHHHH--HHHHHHHHHhC
Confidence 5799999999999999999999999999999975332 11111110110 0 1111111 2222 45555543221
Q ss_pred ccc---ccccccccc-C-------------CCc--eeee-------ccCCCchhh-cC--CCeEEeeCHHHHHHHHHHHc
Q 006440 150 VTG---DRINGLVDG-I-------------SGS--WYIK-------FDTFTPAAE-KG--LPVTRVISRMTLQQILAKAV 200 (645)
Q Consensus 150 ~~~---~~~~~~~~~-~-------------~~~--~~~~-------~~~~~~~~~-~~--~~~~~~i~r~~l~~~L~~~~ 200 (645)
... .....+... . .+. ..+. ++....... .+ .+....++...+.+.|.+.+
T Consensus 81 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 160 (389)
T 2gf3_A 81 HKIFTKTGVLVFGPKGESAFVAETMEAAKEHSLTVDLLEGDEINKRWPGITVPENYNAIFEPNSGVLFSENCIRAYRELA 160 (389)
T ss_dssp SCCEECCCEEEEEETTCCHHHHHHHHHHHHTTCCCEEEETHHHHHHSTTCCCCTTEEEEEETTCEEEEHHHHHHHHHHHH
T ss_pred CcceeecceEEEcCCCchHHHHHHHHHHHHcCCCcEEcCHHHHHHhCCCcccCCCceEEEeCCCcEEeHHHHHHHHHHHH
Confidence 100 000000000 0 000 0000 000000000 00 01123566778888887765
Q ss_pred C--CceEEcCceEEEEEeeCCeEEEEEcCCcEEeccEEEEccCCchh
Q 006440 201 G--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK 245 (645)
Q Consensus 201 ~--~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a~lvVgADG~~S~ 245 (645)
. ...++.+++|++++.+++++.|++.+| +++||.||.|+|.+|.
T Consensus 161 ~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~~~ 206 (389)
T 2gf3_A 161 EARGAKVLTHTRVEDFDISPDSVKIETANG-SYTADKLIVSMGAWNS 206 (389)
T ss_dssp HHTTCEEECSCCEEEEEECSSCEEEEETTE-EEEEEEEEECCGGGHH
T ss_pred HHCCCEEEcCcEEEEEEecCCeEEEEeCCC-EEEeCEEEEecCccHH
Confidence 2 235888999999998888888887766 7999999999999975
No 67
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.28 E-value=3.7e-10 Score=118.15 Aligned_cols=66 Identities=9% Similarity=0.159 Sum_probs=52.2
Q ss_pred EeeCHHHHHHHHHHHcC--CceEEcCceEEEEEeeCCe-EEEEEcCC--cEEeccEEEEccCCch-hhhhhh
Q 006440 185 RVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDK-VSVVLENG--QCYAGDLLIGADGIWS-KVRKNL 250 (645)
Q Consensus 185 ~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~-v~v~~~~g--~~i~a~lvVgADG~~S-~vR~~l 250 (645)
..++...+.+.|.+.+. ...++++++|++++.++++ +.|++.+| .+++||.||.|+|.+| .+.+.+
T Consensus 145 ~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s~~l~~~~ 216 (369)
T 3dme_A 145 GIVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHAPGLARRI 216 (369)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGHHHHHHTE
T ss_pred EEECHHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcchHHHHHHh
Confidence 45778888888877652 2358889999999988766 88888888 4899999999999998 444444
No 68
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.27 E-value=3.8e-10 Score=119.73 Aligned_cols=65 Identities=18% Similarity=0.207 Sum_probs=50.5
Q ss_pred EeeCHHHHHHHHHHHcC--CceEEcCceEEEEEeeCCeEEEEEcCCcEEeccEEEEccCCch-hhhhhh
Q 006440 185 RVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWS-KVRKNL 250 (645)
Q Consensus 185 ~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a~lvVgADG~~S-~vR~~l 250 (645)
..++...+.+.|.+.+. ...++++++|++++.+++++.|+..++ +++||.||.|+|.+| .+++.+
T Consensus 148 g~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~~g-~i~a~~VV~A~G~~s~~l~~~~ 215 (397)
T 2oln_A 148 GTIDVRGTLAALFTLAQAAGATLRAGETVTELVPDADGVSVTTDRG-TYRAGKVVLACGPYTNDLLEPL 215 (397)
T ss_dssp EEEEHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEESSC-EEEEEEEEECCGGGHHHHHGGG
T ss_pred CEEcHHHHHHHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEECCC-EEEcCEEEEcCCcChHHHhhhc
Confidence 35677778777777542 235888999999998888888877665 799999999999994 566655
No 69
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.26 E-value=4e-10 Score=123.37 Aligned_cols=65 Identities=18% Similarity=0.213 Sum_probs=50.7
Q ss_pred EeeCHHHHHHHHHHHcC--CceEEcCceEEEEEeeCCeEEEEEc---CCc--EEeccEEEEccCCchh-hhhh
Q 006440 185 RVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLE---NGQ--CYAGDLLIGADGIWSK-VRKN 249 (645)
Q Consensus 185 ~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~v~~~---~g~--~i~a~lvVgADG~~S~-vR~~ 249 (645)
..++...+...|.+.+. ...++.+++|+++..+++.+.|++. +|+ +++||.||.|+|.+|. +++.
T Consensus 144 g~v~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l~~~ 216 (501)
T 2qcu_A 144 CWVDDARLVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDD 216 (501)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGGHHHHHHH
T ss_pred CEEcHHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChhHHHHHHH
Confidence 35788899998887652 2358889999999988776777773 565 7999999999999996 4543
No 70
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.23 E-value=3.2e-10 Score=119.33 Aligned_cols=66 Identities=17% Similarity=0.304 Sum_probs=53.1
Q ss_pred EEeeCHHHHHHHHHHHcC--CceEEcCceEEEEEeeCCeEEEEEcCCcEEeccEEEEccCCchh-hhhhh
Q 006440 184 TRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK-VRKNL 250 (645)
Q Consensus 184 ~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a~lvVgADG~~S~-vR~~l 250 (645)
...++...+.+.|.+.+. ...++.+++|++++.+++++.|++.+| +++||.||.|+|.+|. +.+.+
T Consensus 148 ~~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~s~~l~~~~ 216 (381)
T 3nyc_A 148 GADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAWCDAIAGLA 216 (381)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGGHHHHHHHH
T ss_pred CceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChhHHHHHHHh
Confidence 346788888888877652 235888999999999888888888877 8999999999999984 45544
No 71
>3kt9_A Aprataxin; FHA domain, beta sandwich, beta sheet, AMP hydrolase, alternative splicing, disease mutation, DNA damage, DNA repair, DNA-binding; 1.65A {Homo sapiens} SCOP: b.26.1.0
Probab=99.20 E-value=1e-10 Score=96.19 Aligned_cols=89 Identities=16% Similarity=0.252 Sum_probs=73.4
Q ss_pred EEEEecCCCCCCCCCeEeeccCCCCCEEEcCCCCCCCCcceeeeCCCcccccceEEEEE--CCEEEEEECCCCcceeecC
Q 006440 530 WFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK--DGAFYLIDLQSEHGTYVTD 607 (645)
Q Consensus 530 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~~--~~~~~i~D~~S~nGt~vn~ 607 (645)
.+|++..+. ..+|.|. .+ ..++|||++.+. |.|..+||+|++|..+ ++.+.|+|++ +|+|+||+
T Consensus 5 c~L~~~~~~---~~~I~L~-~g--~~v~iGR~p~t~-------I~DkrcSR~h~~L~~~~~~g~v~vk~lg-~Np~~vng 70 (102)
T 3kt9_A 5 CWLVRQDSR---HQRIRLP-HL--EAVVIGRGPETK-------ITDKKCSRQQVQLKAECNKGYVKVKQVG-VNPTSIDS 70 (102)
T ss_dssp EEEEETTST---TCEEECC-BT--CEEEECSSTTTC-------CCCTTSCSSCEEEEEETTTTEEEEEECS-SSCCEETT
T ss_pred EEEEecCCC---CCcEEcC-CC--CcEEeccCCccc-------cccCcccCcceEEEEecCCCEEEEEECc-CCCCeECC
Confidence 456665533 3678888 44 457789999874 4699999999999998 5678999985 89999999
Q ss_pred CCCceeecCCCCcEEcCCCCEEEECCCceE
Q 006440 608 NEGRRYRVSSNFPARFRPSDTIEFGSDKKV 637 (645)
Q Consensus 608 ~~~~~~~l~~~~~~~l~~gd~i~~g~~~~~ 637 (645)
. ++.++..+.|++||+|.+-.+...
T Consensus 71 ~-----~l~k~~~~~L~~GD~l~Ll~~~~~ 95 (102)
T 3kt9_A 71 V-----VIGKDQEVKLQPGQVLHMVNELYP 95 (102)
T ss_dssp E-----ECCBTCEEEECTTCCEEEETTEEE
T ss_pred E-----EcCCCCeEEeCCCCEEEEccCCce
Confidence 9 999999999999999999988444
No 72
>3uv0_A Mutator 2, isoform B; FHA, protein binding, dimerization; 1.90A {Drosophila melanogaster}
Probab=99.18 E-value=2.1e-11 Score=97.60 Aligned_cols=75 Identities=17% Similarity=0.262 Sum_probs=61.0
Q ss_pred CCeEeeccCCCCCEEEcCCCCCCCCcceeeeCCCcccccceEEEEECCEEEEEECCCCcce-eecCCCCceeecCCCCcE
Q 006440 543 QPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGT-YVTDNEGRRYRVSSNFPA 621 (645)
Q Consensus 543 ~~~~l~~~~~~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~~~~~~~i~D~~S~nGt-~vn~~~~~~~~l~~~~~~ 621 (645)
.++.|. +..-+.|||++.+++ .+++++|||.||.|...++..++. . |+||| ||||+ ++ .++
T Consensus 13 p~v~l~---~~~~~rIGR~~~~~l-----~LddpsVs~~HAti~~~~~G~~~l-~-S~nGtVFVNGq-----rv---~~~ 74 (102)
T 3uv0_A 13 PAILLK---ADTIYRIGRQKGLEI-----SIADESMELAHATACILRRGVVRL-A-ALVGKIFVNDQ-----EE---TVV 74 (102)
T ss_dssp CCEECC---TTCCEEEESSTTSTE-----ECCCTTSCTTCEEEEEEETTEEEE-E-ESSSCEEETTE-----EE---SEE
T ss_pred ccEEee---cCcEEEEcCCCCCcE-----EECCcccccceEEEEecCCceEEE-E-eccCcEEECCE-----Ee---eeE
Confidence 345555 345799999999988 999999999999998875444442 2 99995 99999 88 479
Q ss_pred EcCCCCE------EEECCCc
Q 006440 622 RFRPSDT------IEFGSDK 635 (645)
Q Consensus 622 ~l~~gd~------i~~g~~~ 635 (645)
.|.+||. ++||.-+
T Consensus 75 ~I~~gDtI~g~v~lrFGnve 94 (102)
T 3uv0_A 75 DIGMENAVAGKVKLRFGNVE 94 (102)
T ss_dssp EECGGGCBTTEEEEEETTEE
T ss_pred EccCCcccccEEEEEecCEE
Confidence 9999999 8999763
No 73
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.15 E-value=3.1e-10 Score=120.78 Aligned_cols=146 Identities=18% Similarity=0.181 Sum_probs=87.3
Q ss_pred CCCcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccC-----CCCcc--------cce-eeC-chHHHHHHhcCh
Q 006440 74 ENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRG-----EGQYR--------GPI-QIQ-SNALAALEAIDL 138 (645)
Q Consensus 74 ~~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~-----~g~~~--------~~~-~l~-~~~~~~l~~l~~ 138 (645)
++..+||+|||||++|+++|+.|+++|++|+|+|+.+..... .+... ..+ .-. ......+..+..
T Consensus 24 ~~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~ 103 (417)
T 3v76_A 24 VAEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRP 103 (417)
T ss_dssp ----CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCH
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCH
Confidence 445689999999999999999999999999999997643210 01000 000 000 111223333321
Q ss_pred h-HHHHHHHhccccccccccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcC--CceEEcCceEEEEE
Q 006440 139 D-VAEEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFK 215 (645)
Q Consensus 139 g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~ 215 (645)
. +.+.+...+. .. .... .+..+ .......+.+.|.+.+. ...++++++|+++.
T Consensus 104 ~~~~~~~~~~Gi----~~---~~~~----------------~g~~~-~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~ 159 (417)
T 3v76_A 104 QDFVALVERHGI----GW---HEKT----------------LGQLF-CDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVE 159 (417)
T ss_dssp HHHHHHHHHTTC----CE---EECS----------------TTEEE-ESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEE
T ss_pred HHHHHHHHHcCC----Cc---EEee----------------CCEEe-eCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEE
Confidence 1 1111111110 00 0000 01111 13456677777776652 23588899999999
Q ss_pred eeCCeEEEEEcCCcEEeccEEEEccCCch
Q 006440 216 DHGDKVSVVLENGQCYAGDLLIGADGIWS 244 (645)
Q Consensus 216 ~~~~~v~v~~~~g~~i~a~lvVgADG~~S 244 (645)
.+++++.|++.+| +++||.||.|+|.+|
T Consensus 160 ~~~~~~~V~~~~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 160 RTASGFRVTTSAG-TVDAASLVVASGGKS 187 (417)
T ss_dssp EETTEEEEEETTE-EEEESEEEECCCCSS
T ss_pred EeCCEEEEEECCc-EEEeeEEEECCCCcc
Confidence 9888999999888 899999999999999
No 74
>4a0e_A YSCD, type III secretion protein; transport protein, SAD phasing, type III secretion system; 2.04A {Yersinia pestis} PDB: 4d9v_A
Probab=99.14 E-value=1.3e-10 Score=98.26 Aligned_cols=93 Identities=15% Similarity=0.201 Sum_probs=76.6
Q ss_pred CcEEEEecCCCCCCCCCeEeeccCCCCCEEEcCCC-CCCCCcceeeeCCCcccccceEEEEECCEEEEEECCCCcceeec
Q 006440 528 GEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSES-HEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVT 606 (645)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~-~~~~~~~~~~~~~~~vSr~Ha~i~~~~~~~~i~D~~S~nGt~vn 606 (645)
+.|-+....+.. .+..+.|. .+ .++||.++ .||+ ++.|+.|||+||+|...+++|+|+ +|+||||+|
T Consensus 3 ~~~klrvlsG~~-~G~~l~L~-~~---~~~IGs~~~~~DL-----vL~D~~Vs~~H~~L~~~~~g~~L~--~s~ngt~vd 70 (123)
T 4a0e_A 3 GSWVCRFYQGKH-RGVEVELP-HG---RCVFGSDPLQSDI-----VLSDSEIAPVHLVLMVDEEGIRLT--DSAEPLLQE 70 (123)
T ss_dssp CCEEEEECSGGG-TTCEEEEC-SE---EEEEESCTTTCSE-----ECCCTTSCSSCEEEEEETTEEEEE--EESSCCEET
T ss_pred ceEEEEEecCCC-CCcEEEcC-CC---cEEECCCCCCCCE-----EEeCCCccceeEEEEECCCeEEEE--eccCCEEEC
Confidence 457555444332 34778888 77 89999999 9998 999999999999999999999998 699999999
Q ss_pred CCCCceeecCCCCcEEcCCCCEEEECCCceEEee
Q 006440 607 DNEGRRYRVSSNFPARFRPSDTIEFGSDKKVMND 640 (645)
Q Consensus 607 ~~~~~~~~l~~~~~~~l~~gd~i~~g~~~~~~~~ 640 (645)
|. ++..+ ..|.+|+.|.+|.. .+.|-
T Consensus 71 G~-----~v~~~--~~L~~g~~l~lG~~-~l~~~ 96 (123)
T 4a0e_A 71 GL-----PVPLG--TLLRAGSCLEVGFL-LWTFV 96 (123)
T ss_dssp TE-----ECCTT--CBCCTTSCEEETTE-EEEEE
T ss_pred CE-----Ecccc--cccCCCCEEEEccE-EEEEE
Confidence 99 87644 38999999999987 55453
No 75
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.10 E-value=1e-09 Score=110.71 Aligned_cols=138 Identities=15% Similarity=0.213 Sum_probs=86.3
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHC-CCeEEEEeccCccccCCCCcc---cceeeCchHHHHHHhcChhHHHHHHHhcccc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRK-GFEVLVFEKDMSAIRGEGQYR---GPIQIQSNALAALEAIDLDVAEEVMRAGCVT 151 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~-g~~~~~~~~~~~~~~~~g~~~---~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~ 151 (645)
..+||+|||||++|+++|+.|+++ |++|+|+|+.+.......... ..+.+.....+.|+.++ ..
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G-----------~~- 105 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIG-----------VA- 105 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHT-----------CC-
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcC-----------CC-
Confidence 357999999999999999999997 999999999754321110000 01122222233333221 00
Q ss_pred ccccccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHc-C--CceEEcCceEEEEEeeCCeE-EEEEc-
Q 006440 152 GDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV-G--DEIILNESNVIDFKDHGDKV-SVVLE- 226 (645)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~-~--~~~i~~~~~v~~i~~~~~~v-~v~~~- 226 (645)
+. . .+ .+....+...+...|.+.+ . ...++++++|+++..+++.+ .|.+.
T Consensus 106 ---~~---~--~~-----------------~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~ 160 (284)
T 1rp0_A 106 ---YD---E--QD-----------------TYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNW 160 (284)
T ss_dssp ---CE---E--CS-----------------SEEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEE
T ss_pred ---cc---c--CC-----------------CEEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEec
Confidence 00 0 00 0011225667777777655 2 23588899999999877754 23332
Q ss_pred --------CC-----cEEeccEEEEccCCchhhhhhh
Q 006440 227 --------NG-----QCYAGDLLIGADGIWSKVRKNL 250 (645)
Q Consensus 227 --------~g-----~~i~a~lvVgADG~~S~vR~~l 250 (645)
++ .+++||.||.|+|.+|.++...
T Consensus 161 ~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~ 197 (284)
T 1rp0_A 161 ALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATG 197 (284)
T ss_dssp HHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHH
T ss_pred cccccccCccccCceEEEECCEEEECCCCchHHHHHH
Confidence 32 5799999999999999988765
No 76
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.09 E-value=8.5e-11 Score=126.80 Aligned_cols=158 Identities=18% Similarity=0.203 Sum_probs=84.6
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccC---CCCcccceeeCchHHHHHHhcCh--hH-HHHHHHhcc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRG---EGQYRGPIQIQSNALAALEAIDL--DV-AEEVMRAGC 149 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~---~g~~~~~~~l~~~~~~~l~~l~~--g~-~~~~~~~~~ 149 (645)
..+||+|||||++|+++|+.|+++|++|+|+|+.+..... .+.....+.-....-.+++.++. .+ ...+....
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 103 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFN- 103 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSC-
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcC-
Confidence 4589999999999999999999999999999987543210 00000000000000122222210 00 00000000
Q ss_pred ccccccccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcC--CceEEcCceEEEEEeeCCe-EEEEEc
Q 006440 150 VTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDK-VSVVLE 226 (645)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~-v~v~~~ 226 (645)
......+... .+- .+.. ...+..+...-....+.+.|.+.+. ...++++++|+++..+++. +.|++.
T Consensus 104 --~~~~~~~~~~-~G~---~~~~----~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~ 173 (447)
T 2i0z_A 104 --NEDIITFFEN-LGV---KLKE----EDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQ 173 (447)
T ss_dssp --HHHHHHHHHH-TTC---CEEE----CGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEET
T ss_pred --HHHHHHHHHh-cCC---ceEE----eeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEEC
Confidence 0000000000 000 0000 0000000000124566677766542 2358889999999977776 778888
Q ss_pred CCcEEeccEEEEccCCch
Q 006440 227 NGQCYAGDLLIGADGIWS 244 (645)
Q Consensus 227 ~g~~i~a~lvVgADG~~S 244 (645)
+|++++||.||.|+|.+|
T Consensus 174 ~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 174 TGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp TCCEEECSCEEECCCCSS
T ss_pred CCCEEECCEEEECCCCCc
Confidence 888899999999999999
No 77
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.08 E-value=5.5e-10 Score=122.31 Aligned_cols=58 Identities=17% Similarity=0.175 Sum_probs=45.5
Q ss_pred CHHHHHHHHHHHcC--CceEEcCceEEEEEeeCCeEE-EEEcCCcEEeccEEEEccCCchh
Q 006440 188 SRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVS-VVLENGQCYAGDLLIGADGIWSK 245 (645)
Q Consensus 188 ~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~-v~~~~g~~i~a~lvVgADG~~S~ 245 (645)
....+.+.|.+.+. ...++++++|+++..+++.+. |++.+|++++||+||.|+|.+|.
T Consensus 218 ~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 218 KLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSAR 278 (549)
T ss_dssp HHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCEEECSCEEECCCTTCH
T ss_pred hHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChh
Confidence 34556666655542 235889999999998877654 88999999999999999999995
No 78
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.08 E-value=9.1e-10 Score=118.42 Aligned_cols=61 Identities=10% Similarity=0.083 Sum_probs=51.1
Q ss_pred EeeCHHHHHHHHHHHcC--CceEEcCc---eEEEEEeeCCeEE-EEEcCCcEEeccEEEEccCCchh
Q 006440 185 RVISRMTLQQILAKAVG--DEIILNES---NVIDFKDHGDKVS-VVLENGQCYAGDLLIGADGIWSK 245 (645)
Q Consensus 185 ~~i~r~~l~~~L~~~~~--~~~i~~~~---~v~~i~~~~~~v~-v~~~~g~~i~a~lvVgADG~~S~ 245 (645)
..++...+.+.|.+.+. ...+++++ +|+++..+++++. |++.+|++++||.||.|+|.+|.
T Consensus 156 g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 156 GWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASAG 222 (438)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGGG
T ss_pred EEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCChh
Confidence 46677788888877652 23588898 9999998888888 99999989999999999999985
No 79
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.05 E-value=1.7e-09 Score=110.54 Aligned_cols=138 Identities=17% Similarity=0.201 Sum_probs=84.4
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHC--CCeEEEEeccCccccCC---CCcccceeeCchHHHHHHhcChhHHHHHHHhccc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMSAIRGE---GQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCV 150 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~--g~~~~~~~~~~~~~~~~---g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~ 150 (645)
..+||+|||||++|+++|+.|+++ |++|+|+|+........ +.......+.+...+.|+.++ + .
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~G--v---------~ 146 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVG--V---------P 146 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHT--C---------C
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcC--C---------c
Confidence 358999999999999999999997 99999999975432110 000011223344444444442 1 0
Q ss_pred cccccccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcC---CceEEcCceEEEEEeeCC--------
Q 006440 151 TGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG---DEIILNESNVIDFKDHGD-------- 219 (645)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~---~~~i~~~~~v~~i~~~~~-------- 219 (645)
+. . .+. +....+..++.+.|.+.+. ...++.+++++++..+++
T Consensus 147 ----~~---~--~G~-----------------~~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~ 200 (344)
T 3jsk_A 147 ----YE---D--EGD-----------------YVVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSS 200 (344)
T ss_dssp ----CE---E--CSS-----------------EEEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC--------
T ss_pred ----cc---c--cCC-----------------eEEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccc
Confidence 00 0 000 1112234566677766542 335788999999876552
Q ss_pred -----------e---EEEEE----c--------CCcEEeccEEEEccCCchhhhhhh
Q 006440 220 -----------K---VSVVL----E--------NGQCYAGDLLIGADGIWSKVRKNL 250 (645)
Q Consensus 220 -----------~---v~v~~----~--------~g~~i~a~lvVgADG~~S~vR~~l 250 (645)
. +.+.. . +..+++|++||+|+|..|++++.+
T Consensus 201 ~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~v~~~~ 257 (344)
T 3jsk_A 201 DDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAPVIISTTGHDGPFGAFS 257 (344)
T ss_dssp --------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECSEEEECCCSSSSSSCHH
T ss_pred cccccccCCCceEeEEEeeeeeeeccCCcccccCceEEEcCEEEECCCCCchhhHHH
Confidence 2 22221 1 224799999999999999977665
No 80
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.05 E-value=7.1e-10 Score=116.40 Aligned_cols=60 Identities=17% Similarity=0.245 Sum_probs=48.1
Q ss_pred EeeCHHHHHHHHHHHcC--CceEEcCceEEEEEeeCCeEEEEEcCCcEEeccEEEEccCCchh
Q 006440 185 RVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK 245 (645)
Q Consensus 185 ~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a~lvVgADG~~S~ 245 (645)
..++...+.+.|.+.+. ...++.+++|++++.+++++.|++.+|+ ++||.||.|+|.+|.
T Consensus 144 g~~~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~~g~-~~a~~vV~a~G~~s~ 205 (372)
T 2uzz_A 144 GFLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIETADGE-YQAKKAIVCAGTWVK 205 (372)
T ss_dssp EEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSCE-EEEEEEEECCGGGGG
T ss_pred cEEcHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEECCCe-EEcCEEEEcCCccHH
Confidence 45667788888877652 2358889999999988888888887774 999999999999874
No 81
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.04 E-value=1.8e-09 Score=119.62 Aligned_cols=66 Identities=21% Similarity=0.258 Sum_probs=50.5
Q ss_pred EeeCHHHHHHHHHHHc--CCceEEcCceEEEEEeeCCeE-EEEEcC---C--cEEeccEEEEccCCch-hhhhhh
Q 006440 185 RVISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDKV-SVVLEN---G--QCYAGDLLIGADGIWS-KVRKNL 250 (645)
Q Consensus 185 ~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v-~v~~~~---g--~~i~a~lvVgADG~~S-~vR~~l 250 (645)
..++...|...|.+.+ ....++.+++|+++..+++++ .|++.+ | .+++|+.||.|+|.+| .+++.+
T Consensus 165 g~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~~~ 239 (561)
T 3da1_A 165 YRTDDARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKD 239 (561)
T ss_dssp EECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHTT
T ss_pred ceEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcchHHHHHhc
Confidence 3678888888887765 223588899999999888774 366653 3 4799999999999999 566655
No 82
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.03 E-value=1.7e-09 Score=120.12 Aligned_cols=63 Identities=16% Similarity=0.116 Sum_probs=46.7
Q ss_pred CHHHHHHHHHHHcC--CceEEcCceEEEEEeeC-CeEE-EEE--cCCc--EEeccEEEEccCCchhhhhhh
Q 006440 188 SRMTLQQILAKAVG--DEIILNESNVIDFKDHG-DKVS-VVL--ENGQ--CYAGDLLIGADGIWSKVRKNL 250 (645)
Q Consensus 188 ~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~-~~v~-v~~--~~g~--~i~a~lvVgADG~~S~vR~~l 250 (645)
....+.+.|.+.+. ...++++++|+++..++ +.+. |.+ .+|+ +++||.||.|+|..|..|+.+
T Consensus 248 ~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~~~~~~ 318 (566)
T 1qo8_A 248 SGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGMNKEMI 318 (566)
T ss_dssp HHHHHHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTTCHHHH
T ss_pred CHHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcccCHHHH
Confidence 45667777776542 23488899999998876 5542 444 3675 689999999999999987765
No 83
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.02 E-value=6e-09 Score=112.35 Aligned_cols=66 Identities=17% Similarity=0.318 Sum_probs=50.0
Q ss_pred EEeeCHHHHHHHHHHHcC--CceEEcCceEEEEEe---------------eCCeE-EEEEcCCcEE--eccEEEEccCCc
Q 006440 184 TRVISRMTLQQILAKAVG--DEIILNESNVIDFKD---------------HGDKV-SVVLENGQCY--AGDLLIGADGIW 243 (645)
Q Consensus 184 ~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~---------------~~~~v-~v~~~~g~~i--~a~lvVgADG~~ 243 (645)
...++...+.+.|.+.+. ...++.+++|++++. +++++ .|.+.+| ++ +||.||.|+|.+
T Consensus 175 ~~~~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~ 253 (448)
T 3axb_A 175 AGFLDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVW 253 (448)
T ss_dssp EEECCHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGG
T ss_pred CeEEcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcC
Confidence 345778888888877652 235888999999987 45554 5777777 68 999999999999
Q ss_pred hh-hhhhh
Q 006440 244 SK-VRKNL 250 (645)
Q Consensus 244 S~-vR~~l 250 (645)
|. +.+.+
T Consensus 254 s~~l~~~~ 261 (448)
T 3axb_A 254 SNRLLNPL 261 (448)
T ss_dssp HHHHHGGG
T ss_pred HHHHHHHc
Confidence 87 55544
No 84
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.01 E-value=2.1e-09 Score=104.96 Aligned_cols=125 Identities=16% Similarity=0.196 Sum_probs=83.7
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcCh-hHHHHHHHhccccccc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDL-DVAEEVMRAGCVTGDR 154 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~-g~~~~~~~~~~~~~~~ 154 (645)
+.+||+|||||++|+.+|+.|+++|++|+|+|+..... | ....+.. ..+.. .+..++
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~---G-----~~~~~~~----~~~~~~~~~~~~---------- 59 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAV---M-----MPFLPPK----PPFPPGSLLERA---------- 59 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGT---T-----CCSSCCC----SCCCTTCHHHHH----------
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcC---C-----cccCccc----cccchhhHHhhh----------
Confidence 45899999999999999999999999999999873211 1 0011100 00000 000000
Q ss_pred cccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcC---CceEEcCceEEEEEeeCCeE-EEEEcCCcE
Q 006440 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG---DEIILNESNVIDFKDHGDKV-SVVLENGQC 230 (645)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~---~~~i~~~~~v~~i~~~~~~v-~v~~~~g~~ 230 (645)
+. ..+ + ++..+.+.|.+.+. ...++ +++|+++..+++.+ .|.+.+|++
T Consensus 60 ----------------~d-----~~g-~-----~~~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~~~v~~v~~~~g~~ 111 (232)
T 2cul_A 60 ----------------YD-----PKD-E-----RVWAFHARAKYLLEGLRPLHLF-QATATGLLLEGNRVVGVRTWEGPP 111 (232)
T ss_dssp ----------------CC-----TTC-C-----CHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCC
T ss_pred ----------------cc-----CCC-C-----CHHHHHHHHHHHHHcCCCcEEE-EeEEEEEEEeCCEEEEEEECCCCE
Confidence 00 001 1 56778888777653 23355 57999999887775 578888888
Q ss_pred EeccEEEEccCCchhhhhhh
Q 006440 231 YAGDLLIGADGIWSKVRKNL 250 (645)
Q Consensus 231 i~a~lvVgADG~~S~vR~~l 250 (645)
++||+||.|+|.+|..+..+
T Consensus 112 i~a~~VV~A~G~~s~~~~~~ 131 (232)
T 2cul_A 112 ARGEKVVLAVGSFLGARLFL 131 (232)
T ss_dssp EECSEEEECCTTCSSCEEEE
T ss_pred EECCEEEECCCCChhhceec
Confidence 99999999999999887654
No 85
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.01 E-value=6e-09 Score=112.89 Aligned_cols=56 Identities=20% Similarity=0.209 Sum_probs=47.2
Q ss_pred HHHHHHHHHcCCceEEcCceEEEEEeeCCeEEEEEcCCcEEeccEEEEccCCchhh
Q 006440 191 TLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSKV 246 (645)
Q Consensus 191 ~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a~lvVgADG~~S~v 246 (645)
.|.+.|.+.+....++++++|++|+.+++++.|++.+|++++||.||.|.......
T Consensus 236 ~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vi~a~p~~~~~ 291 (470)
T 3i6d_A 236 TLVEEIEKQLKLTKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHKAAA 291 (470)
T ss_dssp HHHHHHHHTCCSEEEECSCCEEEEEECSSSEEEEESSSCEEEESEEEECSCHHHHH
T ss_pred HHHHHHHHhcCCCEEEeCCceEEEEEcCCeEEEEECCCCEEECCEEEECCCHHHHH
Confidence 56666777665446899999999999888999999999899999999999887644
No 86
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.01 E-value=1.6e-10 Score=131.46 Aligned_cols=92 Identities=17% Similarity=0.187 Sum_probs=73.3
Q ss_pred eeccCCCccccCCcccccccccccCcccccccccCCccccccccccccCCCCC-----CCCCCCCcCcEEEEcCCHHHHH
Q 006440 17 FSRTHFPVPVYKHSCIEFSRYDHCINYKFRTGTSGQSKNPTQMKAAVAESPTN-----NSDSENKKLRILVAGGGIGGLV 91 (645)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~v~i~g~g~~g~~ 91 (645)
+.-..|++|+..++.++|++|+.|++|...........|. +||..+.+... ...+...++||+|||||++|++
T Consensus 328 ~~~P~~~~~~~~g~~~~i~~c~~c~~C~~~~~~~~~~~C~--vnp~~g~e~~~~~~~~~~~~~~~~~~VvIIGgG~AGl~ 405 (690)
T 3k30_A 328 IADPFLPNKIRDGRLNLIRECIGCNICVSGDLTMSPIRCT--QNPSMGEEWRRGWHPERIRAKESDARVLVVGAGPSGLE 405 (690)
T ss_dssp HHCTTHHHHHHTTCGGGCCCCCCCCHHHHHHHTTSCCCCS--SCTTTTTTTTTCCCSSCCCCCSSCCEEEEECCSHHHHH
T ss_pred HhCccHHHHHHcCCccccccccchhhhhhcccCCCcccCC--cCcccCcccccccCccccCcccccceEEEECCCHHHHH
Confidence 3456789999999999999999999976554444456676 88877766432 1223445689999999999999
Q ss_pred HHHHHHHCCCeEEEEeccC
Q 006440 92 FALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 92 ~a~~l~~~g~~~~~~~~~~ 110 (645)
+|+.|+++|++|+|+|+..
T Consensus 406 aA~~La~~G~~V~liE~~~ 424 (690)
T 3k30_A 406 AARALGVRGYDVVLAEAGR 424 (690)
T ss_dssp HHHHHHHHTCEEEEECSSS
T ss_pred HHHHHHHCCCeEEEEecCC
Confidence 9999999999999999864
No 87
>2brf_A Bifunctional polynucleotide phosphatase/kinase; hydrolase/transferase, FHA, forkhead-associated, PNKP, PNK, polynucleotide kinase 3' phosphatase; 1.40A {Homo sapiens} SCOP: b.26.1.2 PDB: 2w3o_A* 1yjm_A*
Probab=99.01 E-value=2.6e-09 Score=88.63 Aligned_cols=88 Identities=13% Similarity=0.248 Sum_probs=70.4
Q ss_pred CcEEEEecCCCCCCCCCeEee-ccCCCCCEEEcCCCCCCCCcceeeeCCCcccccceEEEEE--CCEEEEEECCCCccee
Q 006440 528 GEWFLVPSGSENVVSQPIYLS-VSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK--DGAFYLIDLQSEHGTY 604 (645)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~~--~~~~~i~D~~S~nGt~ 604 (645)
....|++..+. ..+|.|. ... .++|||++.. .+.|..+||+|++|..+ ++.+.|.|+ ++|+|+
T Consensus 8 ~~c~L~~~~~~---~~~I~Lp~~~g---~~viGR~p~t-------~I~DkrcSR~hv~L~ad~~~~~v~vk~l-G~Np~~ 73 (110)
T 2brf_A 8 GRLWLESPPGE---APPIFLPSDGQ---ALVLGRGPLT-------QVTDRKCSRTQVELVADPETRTVAVKQL-GVNPST 73 (110)
T ss_dssp CEEEEECSTTS---SCCEECCSTTC---CEEECSBTTT-------TBCCTTSCSSCEEEEEETTTTEEEEEEC-SSSCCE
T ss_pred cEEEEEeCCCC---CCcEEeccCCC---CEEEcCCCCc-------ccccccceeeeEEEEEecCCCEEEEEEc-ccCCcE
Confidence 34556665533 2567773 134 8999999964 46899999999999986 678999998 669999
Q ss_pred ecCCCCceeecCCCCcEEcCCCCEEEECCC
Q 006440 605 VTDNEGRRYRVSSNFPARFRPSDTIEFGSD 634 (645)
Q Consensus 605 vn~~~~~~~~l~~~~~~~l~~gd~i~~g~~ 634 (645)
+|+. +|.++..+.|++||+|.|=.+
T Consensus 74 vng~-----~l~k~~~~~L~~GD~leLl~g 98 (110)
T 2brf_A 74 TGTQ-----ELKPGLEGSLGVGDTLYLVNG 98 (110)
T ss_dssp EC-C-----BCCTTCEEEEETTCEEEEETT
T ss_pred ECCE-----EcCCCCEEEecCCCEEEEccC
Confidence 9999 999999999999999998666
No 88
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.98 E-value=3.8e-09 Score=116.57 Aligned_cols=154 Identities=16% Similarity=0.255 Sum_probs=91.3
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceee-C-chHHHHHHhcChhHHHHHHHhcccccc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQI-Q-SNALAALEAIDLDVAEEVMRAGCVTGD 153 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l-~-~~~~~~l~~l~~g~~~~~~~~~~~~~~ 153 (645)
..+||+|||||+||+++|+.|++.|.+|+|+|+........+. ...... . ....+.++.++ +.......... .
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~C-nps~ggia~~~lv~ei~alg-g~~~~~~d~~g---i 101 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSC-NPAIGGIGKGHLVKEVDALG-GLMAKAIDQAG---I 101 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSS-SSEEESTTHHHHHHHHHHTT-CSHHHHHHHHE---E
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccc-cccccchhhHHHHHHHHHhc-cHHHHHhhhcc---c
Confidence 4689999999999999999999999999999987422111111 001111 1 11222333332 11111111100 0
Q ss_pred ccccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCC---ceEEcCceEEEEEeeCCeE-EEEEcCCc
Q 006440 154 RINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGD---EIILNESNVIDFKDHGDKV-SVVLENGQ 229 (645)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~---~~i~~~~~v~~i~~~~~~v-~v~~~~g~ 229 (645)
.+. ......+ .........+++..+.+.|.+.+.. ..+ ++.+|+++..+++.+ .|.+.+|.
T Consensus 102 ~f~-~l~~~kg-------------pav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~g~V~GV~t~dG~ 166 (651)
T 3ces_A 102 QFR-ILNASKG-------------PAVRATRAQADRVLYRQAVRTALENQPNLMI-FQQAVEDLIVENDRVVGAVTQMGL 166 (651)
T ss_dssp EEE-EESTTSC-------------GGGCEEEEEECHHHHHHHHHHHHHTCTTEEE-EECCEEEEEESSSBEEEEEETTSE
T ss_pred chh-hhhcccC-------------cccccchhhCCHHHHHHHHHHHHHhCCCCEE-EEEEEEEEEecCCEEEEEEECCCC
Confidence 000 0000000 0001112467888888888776632 235 567999998777665 57888898
Q ss_pred EEeccEEEEccCCchhhhhh
Q 006440 230 CYAGDLLIGADGIWSKVRKN 249 (645)
Q Consensus 230 ~i~a~lvVgADG~~S~vR~~ 249 (645)
+++||.||.|+|.+|..+..
T Consensus 167 ~I~Ad~VVLATGt~s~~~~i 186 (651)
T 3ces_A 167 KFRAKAVVLTVGTFLDGKIH 186 (651)
T ss_dssp EEEEEEEEECCSTTTCCEEE
T ss_pred EEECCEEEEcCCCCccCccc
Confidence 89999999999999876654
No 89
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=98.98 E-value=6.6e-10 Score=118.79 Aligned_cols=96 Identities=18% Similarity=0.253 Sum_probs=77.0
Q ss_pred cCCcE-EEEecCCCCCCCCCeEeeccCCCCCEEEcCCCCCCCCcceeeeCCCcc---------cccceEEEEE--CC---
Q 006440 526 MNGEW-FLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQV---------SKMHARISYK--DG--- 590 (645)
Q Consensus 526 ~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~~~~~~~~v---------Sr~Ha~i~~~--~~--- 590 (645)
....| .|++..+. ...+.|. .+ .++|||++.|++ +++++.| ||+||+|.++ .+
T Consensus 6 ~~~~~g~l~~~~~~---~~~~~l~-~~---~~~iGR~~~~~~-----~~~~~~~~~~~~~~~vS~~H~~i~~~~~~~~~~ 73 (419)
T 3i6u_A 6 TPAPWARLWALQDG---FANLECV-ND---NYWFGRDKSCEY-----CFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSY 73 (419)
T ss_dssp CCCCSEEEEECSSS---SCCEEEC-SS---EEEEESSTTSSE-----ETTCTTGGGCSGGGGSCTTCEEEECCEETTTEE
T ss_pred cCCCceEeeecCCC---CCceEec-CC---CEEecCCCccCE-----EECCcccccccccccccccceEEEEEcCCCCce
Confidence 33457 45554433 2567888 77 899999999998 9999865 9999999765 22
Q ss_pred EEEEEECCCCcceeecCCCCceeecCCCCcEEcCCCCEEEECCCceEEe
Q 006440 591 AFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKVMN 639 (645)
Q Consensus 591 ~~~i~D~~S~nGt~vn~~~~~~~~l~~~~~~~l~~gd~i~~g~~~~~~~ 639 (645)
.|+|+| .|+||||||+. ++.++...+|.+||.|.+|......|
T Consensus 74 ~~~i~D-~S~nGt~vn~~-----~~~~~~~~~l~~~d~i~~~~~~~~~~ 116 (419)
T 3i6u_A 74 IAYIED-HSGNGTFVNTE-----LVGKGKRRPLNNNSEIALSLSRNKVF 116 (419)
T ss_dssp CCEEEE-CCSSCEEETTE-----ECCTTCEEECCTTEEEEESSTTCEEE
T ss_pred EEEEEE-CCcCCceECcc-----cccCCCcccCCCCCEeeeeccccceE
Confidence 299999 89999999999 99999999999999999998765444
No 90
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.97 E-value=7.7e-09 Score=115.03 Aligned_cols=62 Identities=15% Similarity=0.147 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHcC--CceEEcCceEEEEEeeC-CeEE-EEEc--CCc--EEeccEEEEccCCchhhhhhh
Q 006440 189 RMTLQQILAKAVG--DEIILNESNVIDFKDHG-DKVS-VVLE--NGQ--CYAGDLLIGADGIWSKVRKNL 250 (645)
Q Consensus 189 r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~-~~v~-v~~~--~g~--~i~a~lvVgADG~~S~vR~~l 250 (645)
...+.+.|.+.+. ...++++++|+++..++ +.+. |.+. +|+ +++||.||.|+|..|..++.+
T Consensus 254 g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~n~~~~ 323 (571)
T 1y0p_A 254 GAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFAKNNERV 323 (571)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCTTCHHHH
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcccCHHHH
Confidence 4567777766542 23588999999998766 5432 4433 675 689999999999999866544
No 91
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.95 E-value=1.5e-09 Score=115.50 Aligned_cols=65 Identities=15% Similarity=0.068 Sum_probs=46.6
Q ss_pred EeeCHHHHHHHHHHHcCC--ceEEcCceEE---------EEEeeCCeEEEEEcCCcEEeccEEEEccCCch-hhhh-hh
Q 006440 185 RVISRMTLQQILAKAVGD--EIILNESNVI---------DFKDHGDKVSVVLENGQCYAGDLLIGADGIWS-KVRK-NL 250 (645)
Q Consensus 185 ~~i~r~~l~~~L~~~~~~--~~i~~~~~v~---------~i~~~~~~v~v~~~~g~~i~a~lvVgADG~~S-~vR~-~l 250 (645)
..++...+.+.|.+.+.. ..++++++|+ ++..+++.+.|++.+| +++||.||.|+|.+| .+++ .+
T Consensus 167 g~v~~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~~g-~i~a~~VV~A~G~~s~~l~~~~~ 244 (405)
T 3c4n_A 167 LTYRPGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQIVVHETR-QIRAGVIIVAAGAAGPALVEQGL 244 (405)
T ss_dssp EEECHHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC-------CBCCE-EEEEEEEEECCGGGHHHHHHHHH
T ss_pred EEEcHHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeEEEEECCc-EEECCEEEECCCccHHHHHHHhc
Confidence 467888899999887632 3578899999 8877777777766666 799999999999999 6777 55
No 92
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.94 E-value=4.9e-09 Score=97.95 Aligned_cols=113 Identities=26% Similarity=0.300 Sum_probs=79.4
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhcccccccccc
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRING 157 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~~~ 157 (645)
+||+|||||++|+.+|..|++.|.+|+|+|+.+....... .+..
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~------------------------------------~~~~ 45 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVS------------------------------------RVPN 45 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCS------------------------------------CCCC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCch------------------------------------hhhc
Confidence 6899999999999999999999999999998742110000 0000
Q ss_pred ccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcC--CceEEcCceEEEEEeeCCeEEEEEcCCcEEeccE
Q 006440 158 LVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDL 235 (645)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a~l 235 (645)
+ . +.| ..+....+.+.|.+.+. ...++.+ +|++++.+++.+.+++++| ++++|+
T Consensus 46 ~------------~--------~~~--~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad~ 101 (180)
T 2ywl_A 46 Y------------P--------GLL--DEPSGEELLRRLEAHARRYGAEVRPG-VVKGVRDMGGVFEVETEEG-VEKAER 101 (180)
T ss_dssp S------------T--------TCT--TCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEEEECSSSEEEECSSC-EEEEEE
T ss_pred c------------C--------CCc--CCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEEEEcCCEEEEEECCC-EEEECE
Confidence 0 0 000 01233455555555431 2347778 9999998877888988888 899999
Q ss_pred EEEccCCchhhhhhh
Q 006440 236 LIGADGIWSKVRKNL 250 (645)
Q Consensus 236 vVgADG~~S~vR~~l 250 (645)
||.|+|.++.+++.+
T Consensus 102 vI~A~G~~~~~~~~~ 116 (180)
T 2ywl_A 102 LLLCTHKDPTLPSLL 116 (180)
T ss_dssp EEECCTTCCHHHHHH
T ss_pred EEECCCCCCCccccC
Confidence 999999999886665
No 93
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.94 E-value=2.7e-09 Score=110.98 Aligned_cols=128 Identities=17% Similarity=0.296 Sum_probs=82.4
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhcccccccc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~ 155 (645)
..+||+|||||++|+++|..|+++|++|+|+|+.+... |.+. . .+. ..........
T Consensus 2 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~g---g~~~----~---------~~~--------~~~~~~~~~~ 57 (357)
T 4a9w_A 2 DSVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPG---GAWQ----H---------AWH--------SLHLFSPAGW 57 (357)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSS---GGGG----G---------SCT--------TCBCSSCGGG
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCC---Cccc----C---------CCC--------CcEecCchhh
Confidence 35799999999999999999999999999999875321 1000 0 000 0000000000
Q ss_pred ccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHc---CCceEEcCceEEEEEeeCCeEE-EEEcCCcEE
Q 006440 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHGDKVS-VVLENGQCY 231 (645)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~v~-v~~~~g~~i 231 (645)
. .+...... . . ......+..+.+.|.+.+ +.. ++++++|++++.+++.+. |++.+| ++
T Consensus 58 ~------------~~~~~~~~-~-~--~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~v~~i~~~~~~~~~v~~~~g-~~ 119 (357)
T 4a9w_A 58 S------------SIPGWPMP-A-S--QGPYPARAEVLAYLAQYEQKYALP-VLRPIRVQRVSHFGERLRVVARDGR-QW 119 (357)
T ss_dssp S------------CCSSSCCC-C-C--SSSSCBHHHHHHHHHHHHHHTTCC-EECSCCEEEEEEETTEEEEEETTSC-EE
T ss_pred h------------hCCCCCCC-C-C--ccCCCCHHHHHHHHHHHHHHcCCE-EEcCCEEEEEEECCCcEEEEEeCCC-EE
Confidence 0 00000000 0 0 011345677777776543 333 888999999999999998 888887 89
Q ss_pred eccEEEEccCCchh
Q 006440 232 AGDLLIGADGIWSK 245 (645)
Q Consensus 232 ~a~lvVgADG~~S~ 245 (645)
++|.||.|+|.+|.
T Consensus 120 ~~d~vV~AtG~~~~ 133 (357)
T 4a9w_A 120 LARAVISATGTWGE 133 (357)
T ss_dssp EEEEEEECCCSGGG
T ss_pred EeCEEEECCCCCCC
Confidence 99999999999874
No 94
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.94 E-value=4.4e-09 Score=116.07 Aligned_cols=151 Identities=18% Similarity=0.194 Sum_probs=89.9
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhc---ChhHHHHHHHhccccc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAI---DLDVAEEVMRAGCVTG 152 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l---~~g~~~~~~~~~~~~~ 152 (645)
..+||+|||||++|+++|+.|+++|.+|+|+|+........+.. .... ......+++.+ + ++.........
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~-ps~g-Gia~~~lv~el~al~-g~~~~~~d~~g--- 93 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCN-PAIG-GVAKGQITREIDALG-GEMGKAIDATG--- 93 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSC-SEEE-CHHHHHHHHHHHHHT-CSHHHHHHHHE---
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccc-cchh-hhhHHHHHHHHHhcc-cHHHHHHHhcC---
Confidence 46899999999999999999999999999999874221111100 0010 00112233322 2 11111111100
Q ss_pred cccccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcC---CceEEcCceEEEEEeeCCeEE-EEEcCC
Q 006440 153 DRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG---DEIILNESNVIDFKDHGDKVS-VVLENG 228 (645)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~---~~~i~~~~~v~~i~~~~~~v~-v~~~~g 228 (645)
..+. ......+ .........+++..+.+.|.+.+. ...+ +..+|+++..+++.+. |.+.+|
T Consensus 94 i~f~-~l~~~kg-------------pav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I-~~~~V~~L~~d~g~V~GV~t~~G 158 (641)
T 3cp8_A 94 IQFR-MLNRSKG-------------PAMHSPRAQADKTQYSLYMRRIVEHEPNIDL-LQDTVIGVSANSGKFSSVTVRSG 158 (641)
T ss_dssp EEEE-EECSSSC-------------TTTCEEEEEECHHHHHHHHHHHHHTCTTEEE-EECCEEEEEEETTEEEEEEETTS
T ss_pred Cchh-hcccccC-------------ccccchhhhcCHHHHHHHHHHHHHhCCCCEE-EeeEEEEEEecCCEEEEEEECCC
Confidence 0000 0000000 000111346889889888887763 2235 3568999988888776 888899
Q ss_pred cEEeccEEEEccCCchhhh
Q 006440 229 QCYAGDLLIGADGIWSKVR 247 (645)
Q Consensus 229 ~~i~a~lvVgADG~~S~vR 247 (645)
.+++||.||.|+|.++..+
T Consensus 159 ~~i~Ad~VVLATG~~s~~~ 177 (641)
T 3cp8_A 159 RAIQAKAAILACGTFLNGL 177 (641)
T ss_dssp CEEEEEEEEECCTTCBTCE
T ss_pred cEEEeCEEEECcCCCCCcc
Confidence 9999999999999987644
No 95
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.94 E-value=3.1e-09 Score=112.65 Aligned_cols=144 Identities=20% Similarity=0.228 Sum_probs=82.4
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCcccc-----CCCCcc--c-cee----e--Cch-HHHHHHhcCh-h
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIR-----GEGQYR--G-PIQ----I--QSN-ALAALEAIDL-D 139 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~-----~~g~~~--~-~~~----l--~~~-~~~~l~~l~~-g 139 (645)
..+||+|||||++|+++|+.|+++|++|+|+|+.+.... +.|.+. . ... + .+. ....+..... .
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWD 82 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHH
Confidence 468999999999999999999999999999999753311 001000 0 000 0 000 1112222210 0
Q ss_pred HHHHHHHhccccccccccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcC--CceEEcCceEEEEEee
Q 006440 140 VAEEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDH 217 (645)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~ 217 (645)
+.+.+...+. .+. ....+.. + | .. ....+.+.|.+.+. ...++++++|+++..+
T Consensus 83 ~~~~~~~~Gi----~~~---~~~~g~~---~-----------p--~~-~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~ 138 (401)
T 2gqf_A 83 FISLVAEQGI----TYH---EKELGQL---F-----------C--DE-GAEQIVEMLKSECDKYGAKILLRSEVSQVERI 138 (401)
T ss_dssp HHHHHHHTTC----CEE---ECSTTEE---E-----------E--TT-CTHHHHHHHHHHHHHHTCEEECSCCEEEEEEC
T ss_pred HHHHHHhCCC----ceE---ECcCCEE---c-----------c--CC-CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcc
Confidence 1111111110 000 0000000 0 0 00 34556666665542 2358889999999876
Q ss_pred ----CCeEEEEEcCCcEEeccEEEEccCCch
Q 006440 218 ----GDKVSVVLENGQCYAGDLLIGADGIWS 244 (645)
Q Consensus 218 ----~~~v~v~~~~g~~i~a~lvVgADG~~S 244 (645)
++.+.|++.++ +++||.||.|+|.+|
T Consensus 139 ~~g~~~~~~v~~~~g-~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 139 QNDEKVRFVLQVNST-QWQCKNLIVATGGLS 168 (401)
T ss_dssp CSCSSCCEEEEETTE-EEEESEEEECCCCSS
T ss_pred cCcCCCeEEEEECCC-EEECCEEEECCCCcc
Confidence 56688888777 799999999999999
No 96
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.92 E-value=9.1e-09 Score=113.14 Aligned_cols=154 Identities=17% Similarity=0.250 Sum_probs=91.7
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCccccee-eC-chHHHHHHhcChhHHHHHHHhcccccc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQ-IQ-SNALAALEAIDLDVAEEVMRAGCVTGD 153 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~-l~-~~~~~~l~~l~~g~~~~~~~~~~~~~~ 153 (645)
..+||+|||||+||+++|+.|++.|.+|+|+|+........+.. .... +. ....+.++.++ +.+.........
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cn-ps~GGia~g~lv~eldalg-g~~~~~~d~~gi--- 100 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCN-PAIGGIAKGIVVREIDALG-GEMGKAIDQTGI--- 100 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSC-SEEECTTHHHHHHHHHHHT-CSHHHHHHHHEE---
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCcc-ccccccchHHHHHHHHHhh-hHHHHHhhhccc---
Confidence 45899999999999999999999999999999874221111100 0011 10 11222333333 222222111000
Q ss_pred ccccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCC---ceEEcCceEEEEEeeCCeE-EEEEcCCc
Q 006440 154 RINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGD---EIILNESNVIDFKDHGDKV-SVVLENGQ 229 (645)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~---~~i~~~~~v~~i~~~~~~v-~v~~~~g~ 229 (645)
.+. ......+ .........+++..+.+.|.+.+.. ..+ ++.+|+++..+++.+ .|.+.+|.
T Consensus 101 ~f~-~l~~~kG-------------pav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~g~V~GV~t~dG~ 165 (637)
T 2zxi_A 101 QFK-MLNTRKG-------------KAVQSPRAQADKKRYREYMKKVCENQENLYI-KQEEVVDIIVKNNQVVGVRTNLGV 165 (637)
T ss_dssp EEE-EESTTSC-------------GGGCEEEEEECHHHHHHHHHHHHHTCTTEEE-EESCEEEEEESSSBEEEEEETTSC
T ss_pred cee-ecccccC-------------ccccchhhhCCHHHHHHHHHHHHHhCCCCEE-EEeEEEEEEecCCEEEEEEECCCc
Confidence 000 0000000 0001112467888888888876632 235 467999998877765 48888998
Q ss_pred EEeccEEEEccCCchhhhhh
Q 006440 230 CYAGDLLIGADGIWSKVRKN 249 (645)
Q Consensus 230 ~i~a~lvVgADG~~S~vR~~ 249 (645)
++.|+.||.|+|.++..+..
T Consensus 166 ~i~AdaVVLATG~~s~~~~~ 185 (637)
T 2zxi_A 166 EYKTKAVVVTTGTFLNGVIY 185 (637)
T ss_dssp EEECSEEEECCTTCBTCEEE
T ss_pred EEEeCEEEEccCCCccCcee
Confidence 99999999999998876543
No 97
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.92 E-value=3.4e-09 Score=110.77 Aligned_cols=123 Identities=16% Similarity=0.266 Sum_probs=83.9
Q ss_pred CCcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccc
Q 006440 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (645)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~ 154 (645)
+..+||+||||||+|+++|+.|+++|++|+|+|+.+.. | |.+... . ....
T Consensus 12 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~----g---------------------g~~~~~----~-~~~~ 61 (360)
T 3ab1_A 12 HDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQL----G---------------------GQLAAL----Y-PEKH 61 (360)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS----C---------------------HHHHHT----C-TTSE
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCC----C---------------------Cccccc----C-CCcc
Confidence 34689999999999999999999999999999986421 1 222111 0 0000
Q ss_pred cccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcC--CceEEcCceEEEEEeeCC-eEEEEEcCCcEE
Q 006440 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGD-KVSVVLENGQCY 231 (645)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~-~v~v~~~~g~~i 231 (645)
+. + .. +.+ .+.+..+.+.|.+.+. ...++++++|++++.+++ .+.|++.+|+++
T Consensus 62 ~~---~---------~~--------~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~ 118 (360)
T 3ab1_A 62 IY---D---------VA--------GFP---EVPAIDLVESLWAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVY 118 (360)
T ss_dssp EC---C---------ST--------TCS---SEEHHHHHHHHHHHHHTTCCEEECSCCEEEEEECTTSCEEEEETTSCEE
T ss_pred cc---c---------CC--------CCC---CCCHHHHHHHHHHHHHHhCCEEEcCCEEEEEEECCCceEEEEECCCcEE
Confidence 00 0 00 111 1345566666666542 234778999999998765 688999999899
Q ss_pred eccEEEEccCCchhhhhhh
Q 006440 232 AGDLLIGADGIWSKVRKNL 250 (645)
Q Consensus 232 ~a~lvVgADG~~S~vR~~l 250 (645)
++|.||.|+|.+|..++..
T Consensus 119 ~~~~li~AtG~~~~~~~~~ 137 (360)
T 3ab1_A 119 RSRAVLIAAGLGAFEPRKL 137 (360)
T ss_dssp EEEEEEECCTTCSCCBCCC
T ss_pred EeeEEEEccCCCcCCCCCC
Confidence 9999999999988655543
No 98
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.92 E-value=3.5e-09 Score=109.33 Aligned_cols=122 Identities=18% Similarity=0.270 Sum_probs=83.7
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhcccccccc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~ 155 (645)
..+||+||||||+|+++|+.|+++|++|+|+|+.+.. | |.+... .....+
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~----g---------------------g~~~~~-----~~~~~~ 53 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEP----G---------------------GQLTAL-----YPEKYI 53 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS----C---------------------HHHHHT-----CTTSEE
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCC----C---------------------Ceeecc-----CCCcee
Confidence 4589999999999999999999999999999986421 1 221110 000000
Q ss_pred ccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCC--ceEEcCceEEEEEeeCCeEEEEEcCCcEEec
Q 006440 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGD--EIILNESNVIDFKDHGDKVSVVLENGQCYAG 233 (645)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a 233 (645)
. + .. +.+ .+.+..+.+.|.+.+.. ..++++++|++++.+++.+.|++.+|+++++
T Consensus 54 ~---~---------~~--------~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~ 110 (335)
T 2zbw_A 54 Y---D---------VA--------GFP---KVYAKDLVKGLVEQVAPFNPVYSLGERAETLEREGDLFKVTTSQGNAYTA 110 (335)
T ss_dssp C---C---------ST--------TCS---SEEHHHHHHHHHHHHGGGCCEEEESCCEEEEEEETTEEEEEETTSCEEEE
T ss_pred e---c---------cC--------CCC---CCCHHHHHHHHHHHHHHcCCEEEeCCEEEEEEECCCEEEEEECCCCEEEe
Confidence 0 0 00 011 13355666666555422 2467799999999887788899888888999
Q ss_pred cEEEEccCCchhhhhhh
Q 006440 234 DLLIGADGIWSKVRKNL 250 (645)
Q Consensus 234 ~lvVgADG~~S~vR~~l 250 (645)
|.||.|+|.+|...+..
T Consensus 111 ~~lv~AtG~~~~~p~~~ 127 (335)
T 2zbw_A 111 KAVIIAAGVGAFEPRRI 127 (335)
T ss_dssp EEEEECCTTSEEEECCC
T ss_pred CEEEECCCCCCCCCCCC
Confidence 99999999987555443
No 99
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.91 E-value=2e-09 Score=116.03 Aligned_cols=61 Identities=16% Similarity=0.126 Sum_probs=49.0
Q ss_pred eeCHHHHHHHHHHHcCC--ceEEcCceEEEEEeeCCeEEEEEcC---Cc---EEeccEEEEccCCchhh
Q 006440 186 VISRMTLQQILAKAVGD--EIILNESNVIDFKDHGDKVSVVLEN---GQ---CYAGDLLIGADGIWSKV 246 (645)
Q Consensus 186 ~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~~~---g~---~i~a~lvVgADG~~S~v 246 (645)
.+.+..+.+.|.+.+.. ..++++++|++++.+++.+.|++.+ |+ ++.+|.||.|+|.+|.-
T Consensus 111 ~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~~~~~d~VVvAtG~~s~p 179 (447)
T 2gv8_A 111 FPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPISKDIFDAVSICNGHYEVP 179 (447)
T ss_dssp SCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCCEEEEEESEEEECCCSSSSB
T ss_pred CCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeEEEEeCEEEECCCCCCCC
Confidence 45688888888776532 2477899999999888888888876 66 79999999999998753
No 100
>1yj5_C 5' polynucleotide kinase-3' phosphatase FHA domai; beta sandwich, P-loop, transferase; 2.80A {Mus musculus} SCOP: b.26.1.2
Probab=98.89 E-value=6e-09 Score=89.46 Aligned_cols=88 Identities=11% Similarity=0.223 Sum_probs=71.5
Q ss_pred CcEEEEecCCCCCCCCCeEee-ccCCCCCEEEcCCCCCCCCcceeeeCCCcccccceEEEEE--CCEEEEEECCCCccee
Q 006440 528 GEWFLVPSGSENVVSQPIYLS-VSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK--DGAFYLIDLQSEHGTY 604 (645)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~~--~~~~~i~D~~S~nGt~ 604 (645)
+..+|++..+. ...|.|. ... .++|||++.. .|.|..+||+|++|..+ ++.+.|.++ ++|+|+
T Consensus 8 ~~c~L~p~d~~---~~~I~Lp~~~g---~vvIGRgPet-------~ItDkRcSR~qv~L~ad~~~g~V~Vk~l-G~NP~~ 73 (143)
T 1yj5_C 8 GRLWLQSPTGG---PPPIFLPSDGQ---ALVLGRGPLT-------QVTDRKCSRNQVELIADPESRTVAVKQL-GVNPST 73 (143)
T ss_dssp EEEEEECCTTS---CCCEECCTTTC---EEEECSBTTT-------TBCCSSSCSSCEEEEEETTTTEEEEEEC-SSSCCE
T ss_pred CeEEEEecCCC---CCcEEeccCCC---CEEEcCCCcc-------ccccccccceeEEEEEecCCCeEEEEEc-ccCCcE
Confidence 44566676543 2567773 134 8999999964 56899999999999987 578889998 569999
Q ss_pred ecCCCCceeecCCCCcEEcCCCCEEEECCC
Q 006440 605 VTDNEGRRYRVSSNFPARFRPSDTIEFGSD 634 (645)
Q Consensus 605 vn~~~~~~~~l~~~~~~~l~~gd~i~~g~~ 634 (645)
||+. +|.++..+.|++||+|.|=.+
T Consensus 74 vng~-----~L~k~~~~~L~~GD~LeLl~g 98 (143)
T 1yj5_C 74 VGVH-----ELKPGLSGSLSLGDVLYLVNG 98 (143)
T ss_dssp ETTE-----ECCTTCEEEECTTCEEESSSS
T ss_pred ECCE-----EecCCCEEEecCCCEEEEecC
Confidence 9998 999999999999999997655
No 101
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.87 E-value=1.4e-09 Score=123.40 Aligned_cols=93 Identities=15% Similarity=0.174 Sum_probs=72.3
Q ss_pred eeeccCCCccccCCcccccccccccCc-ccccccccCCccccccccccccCCCCCCCCCCCCcCcEEEEcCCHHHHHHHH
Q 006440 16 VFSRTHFPVPVYKHSCIEFSRYDHCIN-YKFRTGTSGQSKNPTQMKAAVAESPTNNSDSENKKLRILVAGGGIGGLVFAL 94 (645)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~g~g~~g~~~a~ 94 (645)
.++-..|++|+..+..+++++|+.|++ |...........|. +|+..+.+......+....+||+|||||++|+.+|.
T Consensus 313 ~l~~P~l~~k~~~g~~~~~~~c~~c~~~C~~~~~~~~~~~C~--~np~~~~e~~~~~~~~~~~~~vvIIGgG~AGl~aA~ 390 (671)
T 1ps9_A 313 FLADAELLSKAQSGRADEINTCIGCNQACLDQIFVGKVTSCL--VNPRACHETKMPILPAVQKKNLAVVGAGPAGLAFAI 390 (671)
T ss_dssp HHHCTTHHHHHHTTCGGGCCCCCCCCTTTHHHHHTTCCCCCS--SCTTTTCTTTSCCCSCSSCCEEEEECCSHHHHHHHH
T ss_pred HHhCcHHHHHHHcCCCCCcccccccccccchhccCCCceEEE--eCcccccccccCCCCCCCCCeEEEECCCHHHHHHHH
Confidence 344467888999999999999999998 54333333445566 788777665443334445689999999999999999
Q ss_pred HHHHCCCeEEEEeccC
Q 006440 95 AAKRKGFEVLVFEKDM 110 (645)
Q Consensus 95 ~l~~~g~~~~~~~~~~ 110 (645)
.|+++|++|+|+|+.+
T Consensus 391 ~l~~~g~~V~lie~~~ 406 (671)
T 1ps9_A 391 NAAARGHQVTLFDAHS 406 (671)
T ss_dssp HHHTTTCEEEEEESSS
T ss_pred HHHhCCCeEEEEeCCC
Confidence 9999999999999874
No 102
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.87 E-value=1e-08 Score=103.65 Aligned_cols=111 Identities=20% Similarity=0.226 Sum_probs=77.7
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~~ 156 (645)
.+||+|||||++|+++|..|+++|++|+|+|+......... ...
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~------------------------------------~~~ 45 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFAS------------------------------------HSH 45 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCS------------------------------------CCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccch------------------------------------hhc
Confidence 37999999999999999999999999999998631100000 000
Q ss_pred cccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCC--ceEEcCceEEEEEeeCCeEEEEEcCCcEEecc
Q 006440 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGD--EIILNESNVIDFKDHGDKVSVVLENGQCYAGD 234 (645)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a~ 234 (645)
.+.. ...+....+...|.+.+.. ...+...+|++++.+++.+.|++.+|+++++|
T Consensus 46 ~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d 102 (297)
T 3fbs_A 46 GFLG-----------------------QDGKAPGEIIAEARRQIERYPTIHWVEGRVTDAKGSFGEFIVEIDGGRRETAG 102 (297)
T ss_dssp SSTT-----------------------CTTCCHHHHHHHHHHHHTTCTTEEEEESCEEEEEEETTEEEEEETTSCEEEEE
T ss_pred CCcC-----------------------CCCCCHHHHHHHHHHHHHhcCCeEEEEeEEEEEEEcCCeEEEEECCCCEEEcC
Confidence 0000 0012344566666665532 22233569999999888899999999999999
Q ss_pred EEEEccCCchhh
Q 006440 235 LLIGADGIWSKV 246 (645)
Q Consensus 235 lvVgADG~~S~v 246 (645)
.||.|+|..+..
T Consensus 103 ~vviAtG~~~~~ 114 (297)
T 3fbs_A 103 RLILAMGVTDEL 114 (297)
T ss_dssp EEEECCCCEEEC
T ss_pred EEEECCCCCCCC
Confidence 999999997654
No 103
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.86 E-value=2.2e-07 Score=101.53 Aligned_cols=47 Identities=19% Similarity=0.337 Sum_probs=34.9
Q ss_pred eEEcCceEEEEEeeCCeEE-EEEcCCcEEeccEEEEccCCchhhhhhh
Q 006440 204 IILNESNVIDFKDHGDKVS-VVLENGQCYAGDLLIGADGIWSKVRKNL 250 (645)
Q Consensus 204 ~i~~~~~v~~i~~~~~~v~-v~~~~g~~i~a~lvVgADG~~S~vR~~l 250 (645)
.|+++++|++|..++++++ |+++||+++.||.||.+-+.....++.+
T Consensus 237 ~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll 284 (501)
T 4dgk_A 237 EVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLL 284 (501)
T ss_dssp EEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC---------
T ss_pred ceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHHHHHHhc
Confidence 5899999999999998876 8899999999999998888777777665
No 104
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.85 E-value=8.7e-08 Score=106.37 Aligned_cols=62 Identities=21% Similarity=0.222 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHcC--CceEEcCceEEEEEeeC-CeE-EEEE--cCCc--EEeccEEEEccCCchhhhhhh
Q 006440 189 RMTLQQILAKAVG--DEIILNESNVIDFKDHG-DKV-SVVL--ENGQ--CYAGDLLIGADGIWSKVRKNL 250 (645)
Q Consensus 189 r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~-~~v-~v~~--~~g~--~i~a~lvVgADG~~S~vR~~l 250 (645)
...+.+.|.+.+. ...++++++|+++..++ +.+ .|.+ .+|+ ++.||.||.|+|..|..++.+
T Consensus 254 g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~~ 323 (572)
T 1d4d_A 254 GAHVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAKNNERV 323 (572)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCTTCHHHH
T ss_pred HHHHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCccCHHHH
Confidence 4566677766542 23588999999998765 543 2444 3664 689999999999999876654
No 105
>1ujx_A Polynucleotide kinase 3'-phosphatase; DNA repair, FHA domain, beta-sandwich, antiparallel beta-sheets, phosphopeptide binding motif; NMR {Mus musculus} SCOP: b.26.1.2
Probab=98.85 E-value=4.9e-09 Score=88.06 Aligned_cols=89 Identities=12% Similarity=0.250 Sum_probs=70.4
Q ss_pred CcEEEEecCCCCCCCCCeEeeccCCCCCEEEcCCCCCCCCcceeeeCCCcccccceEEEEE--CCEEEEEECCCCcceee
Q 006440 528 GEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK--DGAFYLIDLQSEHGTYV 605 (645)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~~--~~~~~i~D~~S~nGt~v 605 (645)
....|++..+. ..+|.|. . ...+++|||++.. .|.|..+||+|++|..+ ++.+.|.++ ++|+|+|
T Consensus 15 ~~c~L~~~~~~---~~~I~Lp-~-~~g~~viGRgp~t-------~I~DkrcSR~qv~L~ad~~~~~v~vk~l-G~NP~~v 81 (119)
T 1ujx_A 15 GRLWLQSPTGG---PPPIFLP-S-DGQALVLGRGPLT-------QVTDRKCSRNQVELIADPESRTVAVKQL-GVNPSTV 81 (119)
T ss_dssp CCEEEECCSSS---CCCCCCC-T-TSCCEEESBBTTT-------TBCCTTSCTTSEEEEEETTTTEEEEEEC-SSSCCBS
T ss_pred ceEEEEeCCCC---CCcEEec-c-CCCCEEEcCCCCc-------ccccccccceeEEEEEecCCCEEEEEEc-ccCCcEE
Confidence 34566665533 2466663 1 1238999999964 56899999999999987 578999998 5599999
Q ss_pred cCCCCceeecCCCCcEEcCCCCEEEECCC
Q 006440 606 TDNEGRRYRVSSNFPARFRPSDTIEFGSD 634 (645)
Q Consensus 606 n~~~~~~~~l~~~~~~~l~~gd~i~~g~~ 634 (645)
|+. +|.++..+.|++||.|.|=.+
T Consensus 82 ng~-----~l~k~~~~~L~~GD~l~Ll~g 105 (119)
T 1ujx_A 82 GVQ-----ELKPGLSGSLSLGDVLYLVNG 105 (119)
T ss_dssp SSS-----BCCTTCEEEEETTCCCBCBTT
T ss_pred CCE-----EecCCCEEEecCCCEEEEecC
Confidence 999 999999999999999986544
No 106
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.85 E-value=6.6e-09 Score=114.79 Aligned_cols=137 Identities=20% Similarity=0.151 Sum_probs=83.5
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhcccccccc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~ 155 (645)
..+||+|||||++|+++|+.|++.|++|+|+|+.+.. | |.|.. ........
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~----G---------------------G~w~~----~~~pg~~~ 65 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDV----G---------------------GVWYW----NRYPGARC 65 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS----C---------------------THHHH----CCCTTCBC
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCC----C---------------------Ccccc----cCCCceee
Confidence 4689999999999999999999999999999987421 1 11110 00000000
Q ss_pred ccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHc---CC-ceEEcCceEEEEEeeCC--eEEEEEcCCc
Q 006440 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GD-EIILNESNVIDFKDHGD--KVSVVLENGQ 229 (645)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~-~~i~~~~~v~~i~~~~~--~v~v~~~~g~ 229 (645)
. .........+.. ........+ .....+.++.+.|...+ +. ..++++++|++++.+++ .+.|++++|+
T Consensus 66 d----~~~~~~~~~f~~-~~~~~~~~~-~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~ 139 (542)
T 1w4x_A 66 D----IESIEYCYSFSE-EVLQEWNWT-ERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGD 139 (542)
T ss_dssp S----SCTTTSSCCSCH-HHHHHCCCC-BSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCC
T ss_pred c----ccccccccccCh-hhhhccCcc-cccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCC
Confidence 0 000000000000 000000000 12345677777775433 21 24788999999987653 6889999998
Q ss_pred EEeccEEEEccCCchhhh
Q 006440 230 CYAGDLLIGADGIWSKVR 247 (645)
Q Consensus 230 ~i~a~lvVgADG~~S~vR 247 (645)
+++||+||.|+|.+|.-+
T Consensus 140 ~~~ad~vV~AtG~~s~p~ 157 (542)
T 1w4x_A 140 RIRARYLIMASGQLSVPQ 157 (542)
T ss_dssp EEEEEEEEECCCSCCCCC
T ss_pred EEEeCEEEECcCCCCCCC
Confidence 999999999999987543
No 107
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.84 E-value=1.2e-09 Score=124.74 Aligned_cols=93 Identities=15% Similarity=0.112 Sum_probs=70.0
Q ss_pred eeeccCCCccccCCcccccccccccCccccc-ccccCCccccccccccccCCCC-----CCCCCCCCcCcEEEEcCCHHH
Q 006440 16 VFSRTHFPVPVYKHSCIEFSRYDHCINYKFR-TGTSGQSKNPTQMKAAVAESPT-----NNSDSENKKLRILVAGGGIGG 89 (645)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~v~i~g~g~~g 89 (645)
.+.-..|++|+..++.+++++|+.|++|... ........|. +|+..+.+.. ....+....+||+||||||+|
T Consensus 324 ~l~~P~~~~~~~~g~~~~~~~ci~Cn~C~~~~~~~~~~~~C~--~n~~~g~e~~~~~~~~~~~~~~~~~~VvIIGgGpAG 401 (729)
T 1o94_A 324 SIADPFLPQKVEQGRYDDIRVCIGCNVCISRWEIGGPPMICT--QNATAGEEYRRGWHPEKFRQTKNKDSVLIVGAGPSG 401 (729)
T ss_dssp HHHCTTHHHHHHTTCGGGCCCCCCCCHHHHHHHHSSSCCCCS--SCTTTTTHHHHCCCTTCCCCCSSCCEEEEECCSHHH
T ss_pred hhcCchHHHHHHcCCccccccccccchhcccccccCCceeec--cCccccccccccccccccccccCCceEEEECCCHHH
Confidence 3445678899999999999999999986543 2333445565 7776664321 111223456899999999999
Q ss_pred HHHHHHHHHCCCeEEEEeccC
Q 006440 90 LVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 90 ~~~a~~l~~~g~~~~~~~~~~ 110 (645)
+++|..|+++|++|+|+|+.+
T Consensus 402 l~aA~~L~~~G~~Vtlie~~~ 422 (729)
T 1o94_A 402 SEAARVLMESGYTVHLTDTAE 422 (729)
T ss_dssp HHHHHHHHHTTCEEEEECSSS
T ss_pred HHHHHHHHHCCCeEEEEeCCC
Confidence 999999999999999999874
No 108
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.83 E-value=6.7e-09 Score=114.49 Aligned_cols=136 Identities=20% Similarity=0.204 Sum_probs=82.7
Q ss_pred CCcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccc
Q 006440 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (645)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~ 154 (645)
...+||+|||||++|+++|+.|++.|++|+|+|+.+.. | |.|..- ...+..
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~----G---------------------Gtw~~~----~ypg~~ 69 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGV----G---------------------GVWYWN----RYPGAR 69 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS----C---------------------THHHHC----CCTTCB
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCC----C---------------------CccccC----CCCCce
Confidence 34689999999999999999999999999999986421 1 111100 000000
Q ss_pred cccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHc---CC-ceEEcCceEEEEEeeCC--eEEEEEcCC
Q 006440 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GD-EIILNESNVIDFKDHGD--KVSVVLENG 228 (645)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~-~~i~~~~~v~~i~~~~~--~v~v~~~~g 228 (645)
. +-........+.. ......... .....+.++.+.|.+.+ +. ..++++++|++++.+++ .++|++.+|
T Consensus 70 ~----dv~s~~y~~~f~~-~~~~~~~~~-~~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G 143 (549)
T 4ap3_A 70 C----DVESIDYSYSFSP-ELEQEWNWS-EKYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRG 143 (549)
T ss_dssp C----SSCTTTSSCCSCH-HHHHHCCCS-SSSCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTC
T ss_pred e----CCCchhccccccc-ccccCCCCc-cCCCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCC
Confidence 0 0000000000000 000000000 12345667777765543 33 14788999999987765 789999999
Q ss_pred cEEeccEEEEccCCchh
Q 006440 229 QCYAGDLLIGADGIWSK 245 (645)
Q Consensus 229 ~~i~a~lvVgADG~~S~ 245 (645)
++++||+||.|+|..|.
T Consensus 144 ~~i~ad~lV~AtG~~s~ 160 (549)
T 4ap3_A 144 DEVSARFLVVAAGPLSN 160 (549)
T ss_dssp CEEEEEEEEECCCSEEE
T ss_pred CEEEeCEEEECcCCCCC
Confidence 99999999999998764
No 109
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.80 E-value=1.9e-07 Score=99.70 Aligned_cols=55 Identities=20% Similarity=0.315 Sum_probs=42.8
Q ss_pred HHHHHHHHHcCC--ceEEcCceEEEEEeeCCeEEEEEcCCcEEeccEEEEccCCchhhh
Q 006440 191 TLQQILAKAVGD--EIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSKVR 247 (645)
Q Consensus 191 ~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a~lvVgADG~~S~vR 247 (645)
.+.+.|.+.+.. ..++++++|++|+.+++++ | ..+|++++||.||.|-|.+...+
T Consensus 190 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~v-V-~~~g~~~~ad~Vv~a~~~~~~~~ 246 (421)
T 3nrn_A 190 AVIDELERIIMENKGKILTRKEVVEINIEEKKV-Y-TRDNEEYSFDVAISNVGVRETVK 246 (421)
T ss_dssp HHHHHHHHHHHTTTCEEESSCCEEEEETTTTEE-E-ETTCCEEECSEEEECSCHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEcCCeEEEEEEECCEE-E-EeCCcEEEeCEEEECCCHHHHHH
Confidence 455666665432 3589999999999888888 5 56788999999999999986653
No 110
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.80 E-value=5.8e-08 Score=98.67 Aligned_cols=138 Identities=16% Similarity=0.179 Sum_probs=82.1
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHC--CCeEEEEeccCccccCCC---CcccceeeCchHHHHHHhcChhHHHHHHHhccc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMSAIRGEG---QYRGPIQIQSNALAALEAIDLDVAEEVMRAGCV 150 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~--g~~~~~~~~~~~~~~~~g---~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~ 150 (645)
..+||+||||||+|+++|+.|+++ |++|+|+|+......... .......+.+.....|+.++ ..
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~G-----------v~ 132 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELE-----------IP 132 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTT-----------CC
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhC-----------cc
Confidence 357999999999999999999998 999999999754321110 00001122233333333331 00
Q ss_pred cccccccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcC---CceEEcCceEEEEEeeC----C--eE
Q 006440 151 TGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG---DEIILNESNVIDFKDHG----D--KV 221 (645)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~---~~~i~~~~~v~~i~~~~----~--~v 221 (645)
+ .. . +. +....+...+...|.+.+. ...++.+++|+++..++ + .+
T Consensus 133 ----~---~~-~-g~-----------------~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV 186 (326)
T 2gjc_A 133 ----Y---ED-E-GD-----------------YVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTV 186 (326)
T ss_dssp ----C---EE-C-SS-----------------EEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CE
T ss_pred ----c---cc-C-CC-----------------eEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEE
Confidence 0 00 0 10 1112244566777766542 33588899999998763 2 32
Q ss_pred E-EEEc--------------CCcEEec---------------cEEEEccCCchhhhhhh
Q 006440 222 S-VVLE--------------NGQCYAG---------------DLLIGADGIWSKVRKNL 250 (645)
Q Consensus 222 ~-v~~~--------------~g~~i~a---------------~lvVgADG~~S~vR~~l 250 (645)
. |... ++.++.| ++||.|+|..|++.+.+
T Consensus 187 ~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~~~ 245 (326)
T 2gjc_A 187 AGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFC 245 (326)
T ss_dssp EEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSSTTCCEEEECCCCC--CCSHH
T ss_pred EEEEecceeecccccceeccCceEEEEeeccccccccccccCCEEEECcCCCchHHHHH
Confidence 2 2221 3457999 99999999999988877
No 111
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.79 E-value=3.2e-08 Score=102.53 Aligned_cols=52 Identities=17% Similarity=0.111 Sum_probs=43.2
Q ss_pred HHHHHHHHHcCCceEEcCceEEEEEeeCCeEEEEEcCCcEEeccEEEEccCCc
Q 006440 191 TLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIW 243 (645)
Q Consensus 191 ~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a~lvVgADG~~ 243 (645)
.+.+.|.+.++. .++++++|++|+.++++++|++.+|+++++|.||.|....
T Consensus 113 ~l~~~l~~~~g~-~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vV~A~p~~ 164 (342)
T 3qj4_A 113 SIIKHYLKESGA-EVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIVLTMPVP 164 (342)
T ss_dssp HHHHHHHHHHTC-EEESSCCEEEEEECSSSEEEEESSSCCEEESEEEECSCHH
T ss_pred HHHHHHHHhcCC-EEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHH
Confidence 466666666654 4889999999999999999999999889999999998753
No 112
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.79 E-value=2.4e-08 Score=115.96 Aligned_cols=62 Identities=19% Similarity=0.351 Sum_probs=49.7
Q ss_pred EeeCHHHHHHHHHHHcC--CceEEcCceEEEEEeeCCeE-EEEEcCCcEEeccEEEEccCCchhhh
Q 006440 185 RVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKV-SVVLENGQCYAGDLLIGADGIWSKVR 247 (645)
Q Consensus 185 ~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v-~v~~~~g~~i~a~lvVgADG~~S~vR 247 (645)
..++...+.+.|.+.+. ...++.+++|++++.+++++ .|.+.+| +++||.||.|+|.+|...
T Consensus 146 g~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s~~l 210 (830)
T 1pj5_A 146 GLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWGAKI 210 (830)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGHHHH
T ss_pred ceEcHHHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccchHHH
Confidence 46788888888887652 23588899999999887776 4777776 799999999999999643
No 113
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.78 E-value=1.5e-08 Score=111.51 Aligned_cols=137 Identities=19% Similarity=0.227 Sum_probs=84.7
Q ss_pred CcCcEEEEcCCHHHHHHHHHHH-HCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccc
Q 006440 76 KKLRILVAGGGIGGLVFALAAK-RKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~-~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~ 154 (645)
..+||+|||||++|+++|+.|+ +.|++|+|+|+.+.. | |.|... ......
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~----G---------------------Gtw~~~----~ypg~~ 57 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGP----G---------------------GTWYWN----RYPGAL 57 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSS----C---------------------THHHHC----CCTTCE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCC----C---------------------Cccccc----CCCCce
Confidence 4589999999999999999999 999999999997421 1 111100 000000
Q ss_pred cccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHc---CC-ceEEcCceEEEEEeeCC--eEEEEEcCC
Q 006440 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GD-EIILNESNVIDFKDHGD--KVSVVLENG 228 (645)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~-~~i~~~~~v~~i~~~~~--~v~v~~~~g 228 (645)
.. +. .......+.. ......+.. .....+.++.+.|.+.+ +. ..++++++|++++.+++ .+.|++++|
T Consensus 58 ~d-~~---s~~~~~~~~~-~~~~~~~~~-~~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G 131 (540)
T 3gwf_A 58 SD-TE---SHLYRFSFDR-DLLQESTWK-TTYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHG 131 (540)
T ss_dssp EE-EE---GGGSSCCSCH-HHHHHCCCS-BSEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTS
T ss_pred ec-CC---cceeeecccc-ccccCCCCc-ccCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCC
Confidence 00 00 0000000000 000000111 12456777777776543 33 14788999999988766 789999999
Q ss_pred cEEeccEEEEccCCchhhh
Q 006440 229 QCYAGDLLIGADGIWSKVR 247 (645)
Q Consensus 229 ~~i~a~lvVgADG~~S~vR 247 (645)
++++||.||.|+|..|.-+
T Consensus 132 ~~i~ad~lV~AtG~~s~p~ 150 (540)
T 3gwf_A 132 EVYRAKYVVNAVGLLSAIN 150 (540)
T ss_dssp CEEEEEEEEECCCSCCSBC
T ss_pred CEEEeCEEEECCcccccCC
Confidence 9999999999999877443
No 114
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.78 E-value=6.1e-08 Score=101.28 Aligned_cols=36 Identities=36% Similarity=0.668 Sum_probs=33.3
Q ss_pred CCcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
...+||+|||||++|+++|+.|+++|++|+|+|+..
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 346899999999999999999999999999999875
No 115
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.78 E-value=7.2e-08 Score=107.39 Aligned_cols=61 Identities=15% Similarity=0.131 Sum_probs=45.4
Q ss_pred HHHHHHHHHHcC---CceEEcCceEEEEEeeCCeE---EEE-EcCCc--EEeccEEEEccCCchhhhhhh
Q 006440 190 MTLQQILAKAVG---DEIILNESNVIDFKDHGDKV---SVV-LENGQ--CYAGDLLIGADGIWSKVRKNL 250 (645)
Q Consensus 190 ~~l~~~L~~~~~---~~~i~~~~~v~~i~~~~~~v---~v~-~~~g~--~i~a~lvVgADG~~S~vR~~l 250 (645)
..+...|.+.+. +..++.+++|+++..+++.+ .+. +.+|+ .++|+.||.|+|..|.++...
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~~~~~ 203 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYN 203 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCCGGGSSSB
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCcccccCc
Confidence 467777777652 24588899999998877653 222 25676 799999999999999997654
No 116
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.77 E-value=1.1e-08 Score=105.44 Aligned_cols=121 Identities=17% Similarity=0.227 Sum_probs=78.4
Q ss_pred CCCcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhcccccc
Q 006440 74 ENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGD 153 (645)
Q Consensus 74 ~~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~ 153 (645)
....+||+|||||++|+++|+.|+++|++|+|+|+.+......| |.+. .. .
T Consensus 19 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~g---------------------g~~~---~~-----~ 69 (338)
T 3itj_A 19 SHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAG---------------------GQLT---TT-----T 69 (338)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTT---------------------CGGG---GS-----S
T ss_pred CCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcC---------------------cccc---cc-----h
Confidence 34468999999999999999999999999999999652111111 1000 00 0
Q ss_pred ccccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcC--CceEEcCceEEEEEeeCCeEEEEEc---CC
Q 006440 154 RINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLE---NG 228 (645)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~v~~~---~g 228 (645)
.+. .++ +.+ ..+.+..+...|.+.+. ...++.++ |++++.+++.+.+.+. ++
T Consensus 70 ~~~------------~~~--------~~~--~~~~~~~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~~~~~v~~~~~~~~ 126 (338)
T 3itj_A 70 EIE------------NFP--------GFP--DGLTGSELMDRMREQSTKFGTEIITET-VSKVDLSSKPFKLWTEFNEDA 126 (338)
T ss_dssp EEC------------CST--------TCT--TCEEHHHHHHHHHHHHHHTTCEEECSC-EEEEECSSSSEEEEETTCSSS
T ss_pred hhc------------ccC--------CCc--ccCCHHHHHHHHHHHHHHcCCEEEEeE-EEEEEEcCCEEEEEEEecCCC
Confidence 000 000 001 12334566666655431 23477777 9999988888888884 66
Q ss_pred cEEeccEEEEccCCchhh
Q 006440 229 QCYAGDLLIGADGIWSKV 246 (645)
Q Consensus 229 ~~i~a~lvVgADG~~S~v 246 (645)
.++.+|.||.|+|..+..
T Consensus 127 ~~~~~d~vvlAtG~~~~~ 144 (338)
T 3itj_A 127 EPVTTDAIILATGASAKR 144 (338)
T ss_dssp CCEEEEEEEECCCEEECC
T ss_pred cEEEeCEEEECcCCCcCC
Confidence 789999999999996543
No 117
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.76 E-value=1.5e-08 Score=109.63 Aligned_cols=150 Identities=20% Similarity=0.212 Sum_probs=82.8
Q ss_pred CcEEEEcCCHHHHHHHHHHHH---CCCe---EEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhcccc
Q 006440 78 LRILVAGGGIGGLVFALAAKR---KGFE---VLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVT 151 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~---~g~~---~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~ 151 (645)
+||+||||||+|+++|..|++ .|++ |+|+|+.+... |. ....... -+..+ |+ ..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~G---G~----w~~~~~~--g~~~~--g~---------~~ 62 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWG---GQ----WNYTWRT--GLDEN--GE---------PV 62 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSC---GG----GSCCSCC--SBCTT--SS---------BC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCC---CE----eecCCCC--Ccccc--CC---------CC
Confidence 689999999999999999999 9999 99999874321 10 0000000 00000 00 00
Q ss_pred ccccccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHc---CCc-eEEcCceEEEEEeeCC--eEEEEE
Q 006440 152 GDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDE-IILNESNVIDFKDHGD--KVSVVL 225 (645)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~~-~i~~~~~v~~i~~~~~--~v~v~~ 225 (645)
...+..............+..+......+......+.+..+.+.|.+.+ +.. .++++++|++++.+++ .+.|++
T Consensus 63 ~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~ 142 (464)
T 2xve_A 63 HSSMYRYLWSNGPKECLEFADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTV 142 (464)
T ss_dssp CCCCCTTCBCSSCGGGTCBTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEE
T ss_pred cCccccchhhcCChhhcccCCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEE
Confidence 0000000000000000111111101111111122456778887776654 322 2778999999998766 678877
Q ss_pred cC---C--cEEeccEEEEccCCchhhh
Q 006440 226 EN---G--QCYAGDLLIGADGIWSKVR 247 (645)
Q Consensus 226 ~~---g--~~i~a~lvVgADG~~S~vR 247 (645)
.+ | .++.+|.||.|+|.+|.-+
T Consensus 143 ~~~~~g~~~~~~~d~VVvAtG~~s~p~ 169 (464)
T 2xve_A 143 QDHTTDTIYSEEFDYVVCCTGHFSTPY 169 (464)
T ss_dssp EETTTTEEEEEEESEEEECCCSSSSBC
T ss_pred EEcCCCceEEEEcCEEEECCCCCCCCc
Confidence 65 4 5789999999999876554
No 118
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.76 E-value=3.6e-08 Score=100.56 Aligned_cols=113 Identities=24% Similarity=0.334 Sum_probs=78.3
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCC-eEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccccc
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~-~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~~ 156 (645)
+||+||||||+|+++|+.|+++|+ +|+|+|+.. .|. ..... . .+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~-----~gg---~~~~~---------------------~-----~~~ 47 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGM-----PGG---QITGS---------------------S-----EIE 47 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSS-----TTC---GGGGC---------------------S-----CBC
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCC-----CCc---ccccc---------------------c-----ccc
Confidence 689999999999999999999999 999999852 110 00000 0 000
Q ss_pred cccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcC--CceEEcCceEEEEEeeCCeEEEEEcCCcEEecc
Q 006440 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGD 234 (645)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a~ 234 (645)
.+. +.+ ..+++..+.+.|.+.+. ...++. .+|++++.+++.+.|++.+|+++++|
T Consensus 48 ------------~~~--------~~~--~~~~~~~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~~ 104 (311)
T 2q0l_A 48 ------------NYP--------GVK--EVVSGLDFMQPWQEQCFRFGLKHEM-TAVQRVSKKDSHFVILAEDGKTFEAK 104 (311)
T ss_dssp ------------CST--------TCC--SCBCHHHHHHHHHHHHHTTSCEEEC-SCEEEEEEETTEEEEEETTSCEEEEE
T ss_pred ------------cCC--------CCc--ccCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEEcCCEEEEEEcCCCEEECC
Confidence 000 000 13456667776665442 123555 78999998888888888888899999
Q ss_pred EEEEccCCchhhh
Q 006440 235 LLIGADGIWSKVR 247 (645)
Q Consensus 235 lvVgADG~~S~vR 247 (645)
.||.|+|.++.+.
T Consensus 105 ~vv~AtG~~~~~~ 117 (311)
T 2q0l_A 105 SVIIATGGSPKRT 117 (311)
T ss_dssp EEEECCCEEECCC
T ss_pred EEEECCCCCCCCC
Confidence 9999999877543
No 119
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.73 E-value=5.2e-08 Score=100.14 Aligned_cols=114 Identities=20% Similarity=0.208 Sum_probs=80.6
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~~ 156 (645)
.+||+|||||++|+++|+.|+++|++|+|+|+.+.. | |.+... .....+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~----g---------------------G~~~~~-----~~~~~~~ 56 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQL----G---------------------GQLSAL-----YPEKYIY 56 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS----C---------------------HHHHHH-----CTTSEEC
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCC----C---------------------ceehhc-----CCCceEe
Confidence 479999999999999999999999999999987421 1 233111 0011110
Q ss_pred cccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCC--ceEEcCceEEEEEeeCC-eEEEEEcCCcEEec
Q 006440 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGD--EIILNESNVIDFKDHGD-KVSVVLENGQCYAG 233 (645)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~-~v~v~~~~g~~i~a 233 (645)
. +. +.+ .+....+...|.+.+.. ..++++++|++++.+++ .+.|++.+|+ +.+
T Consensus 57 ~------------~~--------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~ 112 (332)
T 3lzw_A 57 D------------VA--------GFP---KIRAQELINNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEET-HYS 112 (332)
T ss_dssp C------------ST--------TCS---SEEHHHHHHHHHHHHTTSCCEEECSCCEEEEEECTTSCEEEEESSEE-EEE
T ss_pred c------------cC--------CCC---CCCHHHHHHHHHHHHHHhCCcEEccCEEEEEEECCCCcEEEEECCCE-EEe
Confidence 0 00 011 13456777777766542 35778999999998776 7889998886 999
Q ss_pred cEEEEccCCch
Q 006440 234 DLLIGADGIWS 244 (645)
Q Consensus 234 ~lvVgADG~~S 244 (645)
|.||.|.|.+|
T Consensus 113 d~vVlAtG~~~ 123 (332)
T 3lzw_A 113 KTVIITAGNGA 123 (332)
T ss_dssp EEEEECCTTSC
T ss_pred CEEEECCCCCc
Confidence 99999999965
No 120
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.73 E-value=5.7e-08 Score=98.88 Aligned_cols=36 Identities=25% Similarity=0.375 Sum_probs=32.1
Q ss_pred CCCcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEecc
Q 006440 74 ENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (645)
Q Consensus 74 ~~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (645)
.|++|||+||||||||+++|+.|+++|++|+|+|+.
T Consensus 3 ~M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~ 38 (304)
T 4fk1_A 3 AMKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNN 38 (304)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECS
T ss_pred CCCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 467899999999999999999999999999999986
No 121
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.72 E-value=3.9e-08 Score=100.61 Aligned_cols=110 Identities=20% Similarity=0.282 Sum_probs=74.7
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhcccccccc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~ 155 (645)
+.+||+|||||++|+++|+.|+++|++|+|+|+. .|. .... . ...
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~------~gg---~~~~---------------------~-----~~~ 58 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET------PGG---QLTE---------------------A-----GIV 58 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS------TTG---GGGG---------------------C-----CEE
T ss_pred CccCEEEECccHHHHHHHHHHHHCCCcEEEEecc------CCC---eecc---------------------c-----ccc
Confidence 3589999999999999999999999999999986 110 0000 0 000
Q ss_pred ccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHc---CCceEEcCceEEEEEeeCCeEEEEEcCCcEEe
Q 006440 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHGDKVSVVLENGQCYA 232 (645)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ 232 (645)
. .+. +.+ .+....+...|.+.+ +.. ++. .+|++++.+++.+.+++.+|.++.
T Consensus 59 ~------------~~~--------~~~---~~~~~~~~~~~~~~~~~~~v~-~~~-~~v~~i~~~~~~~~v~~~~g~~~~ 113 (323)
T 3f8d_A 59 D------------DYL--------GLI---EIQASDMIKVFNKHIEKYEVP-VLL-DIVEKIENRGDEFVVKTKRKGEFK 113 (323)
T ss_dssp C------------CST--------TST---TEEHHHHHHHHHHHHHTTTCC-EEE-SCEEEEEEC--CEEEEESSSCEEE
T ss_pred c------------ccC--------CCC---CCCHHHHHHHHHHHHHHcCCE-EEE-EEEEEEEecCCEEEEEECCCCEEE
Confidence 0 000 000 123445555555443 333 555 899999988888999999988999
Q ss_pred ccEEEEccCCchh
Q 006440 233 GDLLIGADGIWSK 245 (645)
Q Consensus 233 a~lvVgADG~~S~ 245 (645)
+|.||.|.|....
T Consensus 114 ~d~lvlAtG~~~~ 126 (323)
T 3f8d_A 114 ADSVILGIGVKRR 126 (323)
T ss_dssp EEEEEECCCCEEC
T ss_pred cCEEEECcCCCCc
Confidence 9999999999743
No 122
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.72 E-value=1.8e-08 Score=111.04 Aligned_cols=137 Identities=20% Similarity=0.151 Sum_probs=80.9
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhcccccccc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~ 155 (645)
..+||+|||||++|+++|+.|++.|++|+|+|+++.. | |.|.. ...+....
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~----G---------------------Gtw~~----~~yPg~~~ 58 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDV----G---------------------GTWYW----NRYPGCRL 58 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS----C---------------------THHHH----CCCTTCBC
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCC----C---------------------Ccccc----CCCCceee
Confidence 4589999999999999999999999999999997421 1 11100 00000000
Q ss_pred ccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHc---CC-ceEEcCceEEEEEeeC--CeEEEEEcCCc
Q 006440 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GD-EIILNESNVIDFKDHG--DKVSVVLENGQ 229 (645)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~-~~i~~~~~v~~i~~~~--~~v~v~~~~g~ 229 (645)
. .........+.... ....... .....+.++.+.|.+.+ +. ..++++++|++++.++ +.+.|++++|+
T Consensus 59 d----~~~~~y~~~f~~~~-~~~~~~~-~~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~ 132 (545)
T 3uox_A 59 D----TESYAYGYFALKGI-IPEWEWS-ENFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEE 132 (545)
T ss_dssp S----SCHHHHCHHHHTTS-STTCCCS-BSSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTE
T ss_pred c----CchhhcccccCccc-ccCCCcc-ccCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCC
Confidence 0 00000000000000 0000000 11345666666665433 33 2478899999998754 47899999999
Q ss_pred EEeccEEEEccCCchhhh
Q 006440 230 CYAGDLLIGADGIWSKVR 247 (645)
Q Consensus 230 ~i~a~lvVgADG~~S~vR 247 (645)
+++||+||.|+|..|.-+
T Consensus 133 ~~~ad~lV~AtG~~s~p~ 150 (545)
T 3uox_A 133 VVTCRFLISATGPLSASR 150 (545)
T ss_dssp EEEEEEEEECCCSCBC--
T ss_pred EEEeCEEEECcCCCCCCc
Confidence 999999999999876443
No 123
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.71 E-value=9.2e-07 Score=94.30 Aligned_cols=57 Identities=14% Similarity=0.149 Sum_probs=43.5
Q ss_pred HHHHHHHHHHcC--CceEEcCceEEEEEeeCCeEE-EEEcCCcEEeccEEEEccCCchhhh
Q 006440 190 MTLQQILAKAVG--DEIILNESNVIDFKDHGDKVS-VVLENGQCYAGDLLIGADGIWSKVR 247 (645)
Q Consensus 190 ~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~-v~~~~g~~i~a~lvVgADG~~S~vR 247 (645)
..|.+.|.+.+. ...++.+++|++|..++++++ |++ +|++++||.||.|-|.+...+
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~-~g~~~~ad~VV~a~~~~~~~~ 255 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIA-DDRIHDADLVISNLGHAATAV 255 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEE-TTEEEECSEEEECSCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEE-CCEEEECCEEEECCCHHHHHH
Confidence 345566665542 235889999999999888876 665 478899999999999987654
No 124
>4egx_A Kinesin-like protein KIF1A; FHA domain, transport protein; 2.51A {Homo sapiens}
Probab=98.70 E-value=1.1e-07 Score=87.93 Aligned_cols=97 Identities=20% Similarity=0.277 Sum_probs=70.0
Q ss_pred EEEecCCCCCCCCCeEeec-cCCCCCEEEcCCCCCCCCcceeeeCCCcccccceEEEEEC-----CEEEEEECCCCccee
Q 006440 531 FLVPSGSENVVSQPIYLSV-SHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKD-----GAFYLIDLQSEHGTY 604 (645)
Q Consensus 531 ~~~~~~~~~~~~~~~~l~~-~~~~~~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~~~-----~~~~i~D~~S~nGt~ 604 (645)
.|+....++..+..+...| .+ ..+|||..... ..+|++..+.|++.||.|..++ +.++|.++ +.+.||
T Consensus 70 hLvnLn~Dp~ls~~l~y~L~~g---~t~VGr~~~~~--~~dI~L~G~~I~~~Hc~i~~~~~~~~~~~vtl~p~-~~a~t~ 143 (184)
T 4egx_A 70 HLVNLNEDPLMSECLLYYIKDG---ITRVGREDGER--RQDIVLSGHFIKEEHCVFRSDSRGGSEAVVTLEPC-EGADTY 143 (184)
T ss_dssp EEEECCCCTTCSSCSEEECCSE---EEEEECSSSSS--CCSEECCSTTCCSEEEEEEEECCSSCSCEEEEEEC-TTCCEE
T ss_pred eEEeccCCcccCceEEEEECCC---cCcCCCCCcCC--CCeEEECccccccccEEEEEcCCCCceEEEEEeeC-CCCeEE
Confidence 4455454444433333332 44 78999976432 2344999999999999999863 34778876 667899
Q ss_pred ecCCCCceeecCCCCcEEcCCCCEEEECCCceEEee
Q 006440 605 VTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKVMND 640 (645)
Q Consensus 605 vn~~~~~~~~l~~~~~~~l~~gd~i~~g~~~~~~~~ 640 (645)
|||. +|. .++.|++||+|.||....+.|.
T Consensus 144 VNG~-----~I~--~~~~L~~GDrI~lG~~h~Frfn 172 (184)
T 4egx_A 144 VNGK-----KVT--EPSILRSGNRIIMGKSHVFRFN 172 (184)
T ss_dssp ETTE-----ECC--SCEECCTTCEEEETTTEEEEEE
T ss_pred EcCE-----Ecc--ccEEcCCCCEEEECCCCEEEEC
Confidence 9999 885 6799999999999998665553
No 125
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.69 E-value=2.6e-07 Score=100.27 Aligned_cols=56 Identities=13% Similarity=0.089 Sum_probs=46.0
Q ss_pred HHHHHHHHHcCCceEEcCceEEEEEeeCCeEEEEEcCCcEEeccEEEEccCCchhhh
Q 006440 191 TLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSKVR 247 (645)
Q Consensus 191 ~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a~lvVgADG~~S~vR 247 (645)
.|.+.|.+.++...|+.+++|++|+.+++++.|++.+| +++||.||.|-+.+...+
T Consensus 237 ~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~ad~vV~a~p~~~~~~ 292 (475)
T 3lov_A 237 SLIERLEEVLERSEIRLETPLLAISREDGRYRLKTDHG-PEYADYVLLTIPHPQVVQ 292 (475)
T ss_dssp HHHHHHHHHCSSCEEESSCCCCEEEEETTEEEEECTTC-CEEESEEEECSCHHHHHH
T ss_pred HHHHHHHhhccCCEEEcCCeeeEEEEeCCEEEEEECCC-eEECCEEEECCCHHHHHH
Confidence 46666777765456899999999999999999999898 899999999998865433
No 126
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.68 E-value=2.5e-08 Score=102.81 Aligned_cols=118 Identities=21% Similarity=0.283 Sum_probs=76.5
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhcccccccc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~ 155 (645)
..+||+||||||+|+++|+.|+++|++|+|+|+........+. .+.. . ...
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg---~~~~---------------------~-----~~~ 57 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGG---QLTT---------------------T-----TDV 57 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTC---GGGG---------------------C-----SEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCc---eeee---------------------c-----ccc
Confidence 4579999999999999999999999999999983111001110 0000 0 000
Q ss_pred ccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcC--CceEEcCceEEEEEeeCCeEEEEEcCCcEEec
Q 006440 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAG 233 (645)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a 233 (645)
. .++ +++ ..+.+..+.+.|.+.+. ...++.++ |++++.+++.++|++ ++.++++
T Consensus 58 ~------------~~~--------~~~--~~~~~~~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~~~~~v~~-~~~~~~~ 113 (333)
T 1vdc_A 58 E------------NFP--------GFP--EGILGVELTDKFRKQSERFGTTIFTET-VTKVDFSSKPFKLFT-DSKAILA 113 (333)
T ss_dssp C------------CST--------TCT--TCEEHHHHHHHHHHHHHHTTCEEECCC-CCEEECSSSSEEEEC-SSEEEEE
T ss_pred c------------cCC--------CCc--cCCCHHHHHHHHHHHHHHCCCEEEEeE-EEEEEEcCCEEEEEE-CCcEEEc
Confidence 0 000 011 12345566666655431 23466665 889988777888887 7888999
Q ss_pred cEEEEccCCchhh
Q 006440 234 DLLIGADGIWSKV 246 (645)
Q Consensus 234 ~lvVgADG~~S~v 246 (645)
|.||.|+|.++..
T Consensus 114 ~~vv~A~G~~~~~ 126 (333)
T 1vdc_A 114 DAVILAIGAVAKR 126 (333)
T ss_dssp EEEEECCCEEECC
T ss_pred CEEEECCCCCcCC
Confidence 9999999998754
No 127
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.67 E-value=8.2e-08 Score=98.29 Aligned_cols=112 Identities=20% Similarity=0.340 Sum_probs=74.0
Q ss_pred CCcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccc
Q 006440 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (645)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~ 154 (645)
...+||+||||||+|+++|+.|+++|++|+|+|+.. .|. ..... . .
T Consensus 14 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-----~gg---~~~~~---------------------~-----~ 59 (319)
T 3cty_A 14 ERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAV-----AGG---LTAEA---------------------P-----L 59 (319)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-----TTG---GGGGC---------------------S-----C
T ss_pred cCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC-----CCc---ccccc---------------------c-----h
Confidence 346899999999999999999999999999999842 110 00000 0 0
Q ss_pred cccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCC--ceEEcCceEEEEEeeCCeEEEEEcCCcEEe
Q 006440 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGD--EIILNESNVIDFKDHGDKVSVVLENGQCYA 232 (645)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ 232 (645)
+. .++. + ..+.+..+.+.|.+.+.. ..++. .+|++++.+++.+.|.. ++.++.
T Consensus 60 ~~------------~~~~--------~---~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~-~~~~~~ 114 (319)
T 3cty_A 60 VE------------NYLG--------F---KSIVGSELAKLFADHAANYAKIREG-VEVRSIKKTQGGFDIET-NDDTYH 114 (319)
T ss_dssp BC------------CBTT--------B---SSBCHHHHHHHHHHHHHTTSEEEET-CCEEEEEEETTEEEEEE-SSSEEE
T ss_pred hh------------hcCC--------C---cccCHHHHHHHHHHHHHHcCCEEEE-eeEEEEEEeCCEEEEEE-CCCEEE
Confidence 00 0000 0 012344555555554321 23555 68999988888787777 567899
Q ss_pred ccEEEEccCCchh
Q 006440 233 GDLLIGADGIWSK 245 (645)
Q Consensus 233 a~lvVgADG~~S~ 245 (645)
+|.||.|+|.++.
T Consensus 115 ~~~li~AtG~~~~ 127 (319)
T 3cty_A 115 AKYVIITTGTTHK 127 (319)
T ss_dssp EEEEEECCCEEEC
T ss_pred eCEEEECCCCCcc
Confidence 9999999998764
No 128
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.62 E-value=1.3e-07 Score=97.04 Aligned_cols=112 Identities=24% Similarity=0.379 Sum_probs=74.2
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhcccccccc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~ 155 (645)
..+||+||||||+|+++|+.|+++|++|+|+|+.. .|. ..... . .+
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-----~gg---~~~~~---------------------~-----~~ 52 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGM-----PGG---QIAWS---------------------E-----EV 52 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-----TTG---GGGGC---------------------S-----CB
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCC-----CCc---ccccc---------------------c-----cc
Confidence 46899999999999999999999999999999862 110 00000 0 00
Q ss_pred ccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHc---CCceEEcCceEEEEEee--CCe-EEEEEcCCc
Q 006440 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDH--GDK-VSVVLENGQ 229 (645)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~~~i~~~~~v~~i~~~--~~~-v~v~~~~g~ 229 (645)
.. +. +.+ ..+.+..+.+.|.+.+ +.. ++. .+|++++.+ ++. +.|.+.+|+
T Consensus 53 ~~------------~~--------~~~--~~~~~~~~~~~l~~~~~~~gv~-~~~-~~v~~i~~~~~~~~~~~v~~~~g~ 108 (325)
T 2q7v_A 53 EN------------FP--------GFP--EPIAGMELAQRMHQQAEKFGAK-VEM-DEVQGVQHDATSHPYPFTVRGYNG 108 (325)
T ss_dssp CC------------ST--------TCS--SCBCHHHHHHHHHHHHHHTTCE-EEE-CCEEEEEECTTSSSCCEEEEESSC
T ss_pred cc------------CC--------CCC--CCCCHHHHHHHHHHHHHHcCCE-EEe-eeEEEEEeccCCCceEEEEECCCC
Confidence 00 00 000 0133455666555443 333 554 589999876 444 777788888
Q ss_pred EEeccEEEEccCCchh
Q 006440 230 CYAGDLLIGADGIWSK 245 (645)
Q Consensus 230 ~i~a~lvVgADG~~S~ 245 (645)
++++|.||.|+|.++.
T Consensus 109 ~~~~~~vv~AtG~~~~ 124 (325)
T 2q7v_A 109 EYRAKAVILATGADPR 124 (325)
T ss_dssp EEEEEEEEECCCEEEC
T ss_pred EEEeCEEEECcCCCcC
Confidence 9999999999998764
No 129
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.62 E-value=1.9e-07 Score=97.65 Aligned_cols=138 Identities=20% Similarity=0.277 Sum_probs=78.1
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCC-eEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~-~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~ 154 (645)
..+||+|||||++|+++|..|++.|+ +|+|+|+.. .|. .....+..... + .... ...
T Consensus 3 ~~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-----~Gg---~~~~~~~~~~~---~---------~~~~--~~~ 60 (369)
T 3d1c_A 3 QHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-----VGH---SFKHWPKSTRT---I---------TPSF--TSN 60 (369)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-----TTH---HHHTSCTTCBC---S---------SCCC--CCG
T ss_pred ccCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-----CCC---ccccCcccccc---c---------Ccch--hcc
Confidence 35799999999999999999999999 999999874 110 00000000000 0 0000 000
Q ss_pred cccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHH---cCCceEEcCceEEEEEeeCCeEEEEEcCCcEE
Q 006440 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKA---VGDEIILNESNVIDFKDHGDKVSVVLENGQCY 231 (645)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~---~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i 231 (645)
...+.+.. ...... .+..... ...+.+..+...|.+. .+. .++++++|++++.+++.+.|.+.++ ++
T Consensus 61 ~~g~~~~~----~~~~~~-~~~~~~~---~~~~~~~~~~~~l~~~~~~~gv-~i~~~~~v~~i~~~~~~~~v~~~~g-~~ 130 (369)
T 3d1c_A 61 GFGMPDMN----AISMDT-SPAFTFN---EEHISGETYAEYLQVVANHYEL-NIFENTVVTNISADDAYYTIATTTE-TY 130 (369)
T ss_dssp GGTCCCTT----CSSTTC-CHHHHHC---CSSCBHHHHHHHHHHHHHHTTC-EEECSCCEEEEEECSSSEEEEESSC-CE
T ss_pred cCCchhhh----hccccc-ccccccc---ccCCCHHHHHHHHHHHHHHcCC-eEEeCCEEEEEEECCCeEEEEeCCC-EE
Confidence 00000000 000000 0000000 0124455666665443 333 4778999999998877888888777 69
Q ss_pred eccEEEEccCCchh
Q 006440 232 AGDLLIGADGIWSK 245 (645)
Q Consensus 232 ~a~lvVgADG~~S~ 245 (645)
.+|.||.|.|.++.
T Consensus 131 ~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 131 HADYIFVATGDYNF 144 (369)
T ss_dssp EEEEEEECCCSTTS
T ss_pred EeCEEEECCCCCCc
Confidence 99999999999763
No 130
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.61 E-value=5.8e-07 Score=98.40 Aligned_cols=37 Identities=35% Similarity=0.592 Sum_probs=34.1
Q ss_pred CCcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCc
Q 006440 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (645)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (645)
...+||+|||+|++|+++|+.|+++|++|+|+||.+.
T Consensus 39 ~~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~ 75 (510)
T 4at0_A 39 DYEADVVVAGYGIAGVAASIEAARAGADVLVLERTSG 75 (510)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 3568999999999999999999999999999999764
No 131
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.59 E-value=2e-07 Score=100.72 Aligned_cols=148 Identities=16% Similarity=0.165 Sum_probs=79.3
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCC-----CeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKG-----FEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCV 150 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g-----~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~ 150 (645)
..+||+||||||+|+++|..|+++| ++|+|+|+.+......+.......++.. .++.+. .+ ....
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~---~~~~l~-~~------~~p~ 98 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQIS---FLKDLV-SL------RNPT 98 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSC---TTSSSS-TT------TCTT
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcc---hhhccc-cc------cCCC
Confidence 3579999999999999999999999 9999999976322111100000000000 000000 00 0000
Q ss_pred cccccccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCC--ceEEcCceEEEEEee---CCe--EEE
Q 006440 151 TGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGD--EIILNESNVIDFKDH---GDK--VSV 223 (645)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~---~~~--v~v 223 (645)
....+..+.... +. ...+ .... .....+..+.+.|...+.. ..++++++|++++.+ ++. +.|
T Consensus 99 ~~~~~~~~l~~~-~~-~~~~------~~~~---~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V 167 (463)
T 3s5w_A 99 SPYSFVNYLHKH-DR-LVDF------INLG---TFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRV 167 (463)
T ss_dssp CTTSHHHHHHHT-TC-HHHH------HHHC---CSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEE
T ss_pred CCCChhHhhhhc-Cc-eeec------cccc---CCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEE
Confidence 000000000000 00 0000 0000 1134577788877665432 247889999999876 433 367
Q ss_pred EEcCCc----EEeccEEEEccCCch
Q 006440 224 VLENGQ----CYAGDLLIGADGIWS 244 (645)
Q Consensus 224 ~~~~g~----~i~a~lvVgADG~~S 244 (645)
++.+|+ ++++|.||.|+|...
T Consensus 168 ~~~~g~g~~~~~~~d~lVlAtG~~p 192 (463)
T 3s5w_A 168 ISRNADGEELVRTTRALVVSPGGTP 192 (463)
T ss_dssp EEEETTSCEEEEEESEEEECCCCEE
T ss_pred EEecCCCceEEEEeCEEEECCCCCC
Confidence 777765 899999999999743
No 132
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.58 E-value=1.6e-07 Score=103.40 Aligned_cols=35 Identities=29% Similarity=0.471 Sum_probs=32.4
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (645)
..+||+|||||++|+++|+.|++ |.+|+|+||...
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~ 41 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPV 41 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCT
T ss_pred CCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCC
Confidence 46899999999999999999999 999999999754
No 133
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.57 E-value=1.6e-07 Score=95.56 Aligned_cols=111 Identities=19% Similarity=0.301 Sum_probs=74.5
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~~ 156 (645)
++||+||||||+|+++|+.|+++|++|+|+|+.. .|. . .. .. .+.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~-----gG~----~-~~--------~~-----------------~~~ 45 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGERF-----GGQ----I-LD--------TV-----------------DIE 45 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECSST-----TGG----G-GG--------CC-----------------EEC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC-----Cce----e-cc--------cc-----------------ccc
Confidence 3799999999999999999999999999998531 110 0 00 00 000
Q ss_pred cccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcC--CceEEcCceEEEEEeeC---CeEEEEEcCCcEE
Q 006440 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHG---DKVSVVLENGQCY 231 (645)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~---~~v~v~~~~g~~i 231 (645)
.+. +.+ ...+..+.+.|.+.+. ...++.+++|+.++.+. +.+.|++++|+++
T Consensus 46 ~~~--------------------~~~---~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~ 102 (310)
T 1fl2_A 46 NYI--------------------SVP---KTEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVL 102 (310)
T ss_dssp CBT--------------------TBS---SEEHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEE
T ss_pred ccc--------------------CcC---CCCHHHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEE
Confidence 000 000 1234455555555432 23477888999997653 3688889899899
Q ss_pred eccEEEEccCCchh
Q 006440 232 AGDLLIGADGIWSK 245 (645)
Q Consensus 232 ~a~lvVgADG~~S~ 245 (645)
++|.||.|+|.++.
T Consensus 103 ~~~~lv~AtG~~~~ 116 (310)
T 1fl2_A 103 KARSIIVATGAKWR 116 (310)
T ss_dssp EEEEEEECCCEEEC
T ss_pred EeCEEEECcCCCcC
Confidence 99999999998764
No 134
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.57 E-value=1.4e-07 Score=97.34 Aligned_cols=113 Identities=21% Similarity=0.226 Sum_probs=73.5
Q ss_pred CCcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccc
Q 006440 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (645)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~ 154 (645)
+..+||+||||||+|+++|+.|+++|++|+|+|+.. .|. .+... ..
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-----~gg---~~~~~--------------------------~~ 57 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTS-----FGG---ALMTT--------------------------TD 57 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSS-----CSC---GGGSC--------------------------SC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-----CCC---ceecc--------------------------ch
Confidence 346899999999999999999999999999999641 110 00000 00
Q ss_pred cccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcC--CceEEcCceEEEEEeeCCeEEE-EEcCCcEE
Q 006440 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSV-VLENGQCY 231 (645)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~v-~~~~g~~i 231 (645)
.. .++ +++ ..+.+..+...|.+.+. ...++.++ +++++. ++.+.| .+.+|+++
T Consensus 58 ~~------------~~~--------~~~--~~~~~~~~~~~l~~~~~~~~v~~~~~~-v~~i~~-~~~~~v~~~~~g~~~ 113 (335)
T 2a87_A 58 VE------------NYP--------GFR--NGITGPELMDEMREQALRFGADLRMED-VESVSL-HGPLKSVVTADGQTH 113 (335)
T ss_dssp BC------------CST--------TCT--TCBCHHHHHHHHHHHHHHTTCEEECCC-EEEEEC-SSSSEEEEETTSCEE
T ss_pred hh------------hcC--------CCC--CCCCHHHHHHHHHHHHHHcCCEEEEee-EEEEEe-CCcEEEEEeCCCCEE
Confidence 00 000 000 01334455555544331 22366665 888887 556777 78888899
Q ss_pred eccEEEEccCCchh
Q 006440 232 AGDLLIGADGIWSK 245 (645)
Q Consensus 232 ~a~lvVgADG~~S~ 245 (645)
++|.||.|+|.++.
T Consensus 114 ~~d~lviAtG~~~~ 127 (335)
T 2a87_A 114 RARAVILAMGAAAR 127 (335)
T ss_dssp EEEEEEECCCEEEC
T ss_pred EeCEEEECCCCCcc
Confidence 99999999999764
No 135
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.56 E-value=6.3e-07 Score=96.95 Aligned_cols=31 Identities=35% Similarity=0.571 Sum_probs=30.3
Q ss_pred cEEEEcCCHHHHHHHHHHHHCCCeEEEEecc
Q 006440 79 RILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (645)
Q Consensus 79 ~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (645)
||+|||||++|+++|+.|+++|++|+|+|+.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~ 31 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR 31 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 7999999999999999999999999999997
No 136
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.56 E-value=1.5e-07 Score=96.23 Aligned_cols=113 Identities=17% Similarity=0.259 Sum_probs=73.4
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhcccccccc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~ 155 (645)
..+||+||||||+|+++|+.|+++|++|+|+|+.. .|. .+.. . . ..
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-----~gg---~~~~---------------------~-~----~~ 49 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGME-----KGG---QLTT---------------------T-T----EV 49 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSS-----TTG---GGGG---------------------C-S----BC
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccCC-----CCc---eEec---------------------c-h----hh
Confidence 45799999999999999999999999999999641 110 0000 0 0 00
Q ss_pred ccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcC--CceEEcCceEEEEEeeCCeEEEEEcCCcEEec
Q 006440 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAG 233 (645)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a 233 (645)
.. ++ +++ ..+.+..+.+.|.+.+. ...++.++ +++++.+++.+.+ +.++.++.+
T Consensus 50 ~~------------~~--------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~i~~~~~~~~v-~~~~~~~~~ 105 (320)
T 1trb_A 50 EN------------WP--------GDP--NDLTGPLLMERMHEHATKFETEIIFDH-INKVDLQNRPFRL-NGDNGEYTC 105 (320)
T ss_dssp CC------------ST--------TCC--SSCBHHHHHHHHHHHHHHTTCEEECCC-EEEEECSSSSEEE-EESSCEEEE
T ss_pred hh------------CC--------CCC--CCCCHHHHHHHHHHHHHHCCCEEEEee-eeEEEecCCEEEE-EeCCCEEEc
Confidence 00 00 000 01234455555544331 22366664 8899887778887 677889999
Q ss_pred cEEEEccCCchhh
Q 006440 234 DLLIGADGIWSKV 246 (645)
Q Consensus 234 ~lvVgADG~~S~v 246 (645)
|.||.|+|.++..
T Consensus 106 ~~lv~AtG~~~~~ 118 (320)
T 1trb_A 106 DALIIATGASARY 118 (320)
T ss_dssp EEEEECCCEEECC
T ss_pred CEEEECCCCCcCC
Confidence 9999999987643
No 137
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.52 E-value=3.4e-07 Score=93.30 Aligned_cols=117 Identities=17% Similarity=0.197 Sum_probs=71.6
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhcccccccc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~ 155 (645)
..|||+||||||||+++|+.|+++|++|+|+|+........+ |. + .....+
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~---------------------G~---~-----~~~~~i 53 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAG---------------------GQ---L-----TTTTII 53 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTT---------------------CG---G-----GGSSEE
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccC---------------------CC---c-----CChHHh
Confidence 358999999999999999999999999999998642110000 00 0 000000
Q ss_pred ccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcC--CceEEcCceEEEEEeeCCeEEEEEcCCcEEec
Q 006440 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAG 233 (645)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a 233 (645)
.. +. +++. .+...+|...+.+.+. ...+. ..++.......+...+...++.++.+
T Consensus 54 ~~------------~~--------g~~~--~i~~~~l~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~ 110 (314)
T 4a5l_A 54 EN------------FP--------GFPN--GIDGNELMMNMRTQSEKYGTTII-TETIDHVDFSTQPFKLFTEEGKEVLT 110 (314)
T ss_dssp CC------------ST--------TCTT--CEEHHHHHHHHHHHHHHTTCEEE-CCCEEEEECSSSSEEEEETTCCEEEE
T ss_pred hh------------cc--------CCcc--cCCHHHHHHHHHHHHhhcCcEEE-EeEEEEeecCCCceEEEECCCeEEEE
Confidence 00 00 0110 1223344444433321 12233 45677777777777788888899999
Q ss_pred cEEEEccCCch
Q 006440 234 DLLIGADGIWS 244 (645)
Q Consensus 234 ~lvVgADG~~S 244 (645)
|.||.|.|...
T Consensus 111 ~~liiATG~~~ 121 (314)
T 4a5l_A 111 KSVIIATGATA 121 (314)
T ss_dssp EEEEECCCEEE
T ss_pred eEEEEcccccc
Confidence 99999999754
No 138
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.51 E-value=1.6e-06 Score=96.07 Aligned_cols=64 Identities=19% Similarity=0.280 Sum_probs=45.2
Q ss_pred eeCHHHHHHHHHHHc--CCceEEcCceEEEEEeeCCeE-EEEEc---CCc--EEeccEEEEccCCchh-hhhh
Q 006440 186 VISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDKV-SVVLE---NGQ--CYAGDLLIGADGIWSK-VRKN 249 (645)
Q Consensus 186 ~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v-~v~~~---~g~--~i~a~lvVgADG~~S~-vR~~ 249 (645)
.++...+...|.+.+ ....++.+++|+++..+++.+ .|++. +|+ +++||.||.|.|.+|. +++.
T Consensus 184 ~v~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~~l~~~ 256 (571)
T 2rgh_A 184 RNNDARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDKVRNL 256 (571)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHHHHHTT
T ss_pred eEchHHHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHHHHHHh
Confidence 356667777776654 223588899999999887764 35543 343 7999999999999984 4543
No 139
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.50 E-value=2.3e-06 Score=95.32 Aligned_cols=36 Identities=25% Similarity=0.393 Sum_probs=33.4
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (645)
..+||+|||||++|+++|+.|+++|.+|+|+|+...
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~ 52 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFP 52 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCG
T ss_pred ccCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 458999999999999999999999999999999754
No 140
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.49 E-value=2.2e-06 Score=95.16 Aligned_cols=36 Identities=22% Similarity=0.373 Sum_probs=33.3
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (645)
..+||+|||||++|+++|+.|+++|.+|+|+||...
T Consensus 6 ~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~ 41 (588)
T 2wdq_A 6 REFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFP 41 (588)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCG
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCC
Confidence 357999999999999999999999999999999754
No 141
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.43 E-value=8.9e-07 Score=97.08 Aligned_cols=112 Identities=19% Similarity=0.315 Sum_probs=75.7
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhcccccccc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~ 155 (645)
..+||+||||||+|+++|+.|+++|++|+|+|+.. .|. . .. .. .+
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~-----GG~----~-~~--------~~-----------------~~ 255 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERF-----GGQ----V-LD--------TV-----------------DI 255 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSST-----TGG----G-TT--------CS-----------------CB
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEECCC-----CCc----c-cc--------cc-----------------cc
Confidence 46899999999999999999999999999998631 110 0 00 00 00
Q ss_pred ccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcC--CceEEcCceEEEEEee---CCeEEEEEcCCcE
Q 006440 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDH---GDKVSVVLENGQC 230 (645)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~---~~~v~v~~~~g~~ 230 (645)
..+. +.+ ......+...|.+.+. ...++.+++|+++..+ ++.+.|++.+|++
T Consensus 256 ~~~~--------------------~~~---~~~~~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~ 312 (521)
T 1hyu_A 256 ENYI--------------------SVP---KTEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAV 312 (521)
T ss_dssp CCBT--------------------TBS---SBCHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCE
T ss_pred cccC--------------------CCC---CCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCE
Confidence 0000 000 1234456666655442 2347788899999754 2368899999989
Q ss_pred EeccEEEEccCCchh
Q 006440 231 YAGDLLIGADGIWSK 245 (645)
Q Consensus 231 i~a~lvVgADG~~S~ 245 (645)
+++|.||.|+|.++.
T Consensus 313 ~~~d~vVlAtG~~~~ 327 (521)
T 1hyu_A 313 LKARSIIIATGAKWR 327 (521)
T ss_dssp EEEEEEEECCCEEEC
T ss_pred EEcCEEEECCCCCcC
Confidence 999999999998754
No 142
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.43 E-value=1.9e-07 Score=99.95 Aligned_cols=48 Identities=19% Similarity=0.320 Sum_probs=39.8
Q ss_pred HHHHHHcCCceEEcCceEEEEEeeCCeEEEEEcCCcEEeccEEEEccCCc
Q 006440 194 QILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIW 243 (645)
Q Consensus 194 ~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a~lvVgADG~~ 243 (645)
+.+.+..+ .++.+++|++|+.++++++|++.+|++++||.||.|-|..
T Consensus 211 ~~~~~~~g--~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vi~a~~~~ 258 (431)
T 3k7m_X 211 DAMSQEIP--EIRLQTVVTGIDQSGDVVNVTVKDGHAFQAHSVIVATPMN 258 (431)
T ss_dssp HHHHTTCS--CEESSCCEEEEECSSSSEEEEETTSCCEEEEEEEECSCGG
T ss_pred HHHHhhCC--ceEeCCEEEEEEEcCCeEEEEECCCCEEEeCEEEEecCcc
Confidence 33344444 5889999999999888999999999889999999999954
No 143
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.42 E-value=1e-07 Score=99.16 Aligned_cols=34 Identities=26% Similarity=0.569 Sum_probs=31.6
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCC------CeEEEEeccCc
Q 006440 78 LRILVAGGGIGGLVFALAAKRKG------FEVLVFEKDMS 111 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g------~~~~~~~~~~~ 111 (645)
+||+|||||++|+++|+.|+++| ++|+|+|+...
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~ 40 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFT 40 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCG
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCC
Confidence 48999999999999999999998 99999999753
No 144
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.42 E-value=5.1e-07 Score=97.97 Aligned_cols=55 Identities=13% Similarity=0.097 Sum_probs=42.7
Q ss_pred HHHHHHHHHcCCceEEcCceEEEEEeeCCeEEEEE---cCCcEEeccEEEEccCCchhh
Q 006440 191 TLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVL---ENGQCYAGDLLIGADGIWSKV 246 (645)
Q Consensus 191 ~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~---~~g~~i~a~lvVgADG~~S~v 246 (645)
.|.+.|.+.++. .++++++|++|+.+++++.|++ .+|++++||.||.|-+.....
T Consensus 239 ~l~~~l~~~lg~-~i~~~~~V~~i~~~~~~~~v~~~~~~~g~~~~ad~vV~a~~~~~~~ 296 (478)
T 2ivd_A 239 VLIDALAASLGD-AAHVGARVEGLAREDGGWRLIIEEHGRRAELSVAQVVLAAPAHATA 296 (478)
T ss_dssp HHHHHHHHHHGG-GEESSEEEEEEECC--CCEEEEEETTEEEEEECSEEEECSCHHHHH
T ss_pred HHHHHHHHHhhh-hEEcCCEEEEEEecCCeEEEEEeecCCCceEEcCEEEECCCHHHHH
Confidence 455666666654 4889999999998888888988 778889999999999987643
No 145
>1wv3_A Similar to DNA segregation ATPase and related proteins; structural genomics, unknown function; 1.75A {Staphylococcus aureus subsp} SCOP: b.26.1.4 b.26.1.4
Probab=98.40 E-value=2e-07 Score=90.49 Aligned_cols=68 Identities=18% Similarity=0.139 Sum_probs=56.7
Q ss_pred CEEEcCCCCCCCCcceeeeCCCcccccceEEEEE--C--CEEEEEECCCCcce-eecCCCCceeecCCCCcEEcC-CCCE
Q 006440 555 PYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK--D--GAFYLIDLQSEHGT-YVTDNEGRRYRVSSNFPARFR-PSDT 628 (645)
Q Consensus 555 ~~~iGR~~~~~~~~~~~~~~~~~vSr~Ha~i~~~--~--~~~~i~D~~S~nGt-~vn~~~~~~~~l~~~~~~~l~-~gd~ 628 (645)
.++|||++.|++ ++++. + ||.+.++ + +.|+|+|++|+||| ||||. ++. .+..|+ .||.
T Consensus 93 ~itIG~~~~~dI-----~l~~~-~---~~~~~~~~~~~~~~~~l~~l~s~ngtvyvNg~-----~i~--~~~~L~~~GD~ 156 (238)
T 1wv3_A 93 TMTIGPNAYDDM-----VIQSL-M---NAIIIKDFQSIQESQYVRIVHDKNTDVYINYE-----LQE--QLTNKAYIGDH 156 (238)
T ss_dssp EEEEESSTTSSE-----ECTTC-S---SCEEEECGGGHHHHCEEEEECCTTCCEEETTE-----ECC--SSEEEEETTCE
T ss_pred eEEEeCCCCCeE-----EeCCC-e---eEEEEecccCcCCcEEEEEccCCCCCEEECCE-----Eec--cceeccCCcCE
Confidence 899999999998 99888 3 6877777 3 58999999999997 99999 885 456899 9999
Q ss_pred EEECCCceEEe
Q 006440 629 IEFGSDKKVMN 639 (645)
Q Consensus 629 i~~g~~~~~~~ 639 (645)
|.+|.- .+.|
T Consensus 157 I~ig~~-~~~~ 166 (238)
T 1wv3_A 157 IYVEGI-WLEV 166 (238)
T ss_dssp EEETTE-EEEE
T ss_pred EEECCE-EEEE
Confidence 999865 4434
No 146
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.39 E-value=6.7e-07 Score=96.68 Aligned_cols=140 Identities=16% Similarity=0.165 Sum_probs=75.9
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCc---hHHHHHHhcChhHHHHHHHhcccccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQS---NALAALEAIDLDVAEEVMRAGCVTGD 153 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~---~~~~~l~~l~~g~~~~~~~~~~~~~~ 153 (645)
++||+||||||+|+++|+.|+++|++|+|+|+... | +..+.. .+..++... ++++.+..... ..
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~-----g----G~~~~~g~~psk~ll~~~--~~~~~~~~~~~--~~ 69 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKYW-----G----GVCLNVGCIPSKALLRNA--ELVHIFTKDAK--AF 69 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCT-----T----HHHHHHSHHHHHHHHHHH--HHHHHHHHHTT--TT
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC-----C----CcccccCchhhHHHHHHH--HHHHHHHHHHH--hc
Confidence 57999999999999999999999999999998621 1 111111 122334433 44444431111 00
Q ss_pred ccccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHc--CCceEEcCceEEEEEeeCCeEEEEEcCC--c
Q 006440 154 RINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDKVSVVLENG--Q 229 (645)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~v~~~~g--~ 229 (645)
.+ .. .....+.... ... ... ...+.+.|.+.+ ....++.++.+. .+++.+.|.+.+| +
T Consensus 70 g~---~~----~~~~~~~~~~--~~~----~~~--~~~l~~~l~~~~~~~gv~~~~g~~~~---id~~~v~V~~~~G~~~ 131 (464)
T 2a8x_A 70 GI---SG----EVTFDYGIAY--DRS----RKV--AEGRVAGVHFLMKKNKITEIHGYGTF---ADANTLLVDLNDGGTE 131 (464)
T ss_dssp TE---EE----CCEECHHHHH--HHH----HHH--HHHHHHHHHHHHHHTTCEEECEEEEE---SSSSEEEEEETTSCCE
T ss_pred CC---CC----CCccCHHHHH--HHH----HHH--HHHHHHHHHHHHHhCCCEEEEeEEEE---ecCCeEEEEeCCCceE
Confidence 10 00 0000000000 000 000 012333333222 223355555432 3566788888888 6
Q ss_pred EEeccEEEEccCCchhhh
Q 006440 230 CYAGDLLIGADGIWSKVR 247 (645)
Q Consensus 230 ~i~a~lvVgADG~~S~vR 247 (645)
++++|.||.|+|.++.+.
T Consensus 132 ~~~~d~lViAtG~~~~~~ 149 (464)
T 2a8x_A 132 SVTFDNAIIATGSSTRLV 149 (464)
T ss_dssp EEEEEEEEECCCEEECCC
T ss_pred EEEcCEEEECCCCCCCCC
Confidence 899999999999987543
No 147
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.38 E-value=5.3e-06 Score=93.04 Aligned_cols=36 Identities=33% Similarity=0.493 Sum_probs=33.4
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (645)
..+||+|||||++|+++|+.|+++|.+|+|+|+...
T Consensus 4 ~~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~ 39 (660)
T 2bs2_A 4 QYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPV 39 (660)
T ss_dssp EECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCG
T ss_pred ccccEEEECchHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 468999999999999999999999999999999754
No 148
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.37 E-value=9.8e-07 Score=95.79 Aligned_cols=35 Identities=34% Similarity=0.537 Sum_probs=32.5
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
..+||+||||||+|+++|+.|+++|++|+|+|+.+
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~ 38 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRG 38 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 35899999999999999999999999999999853
No 149
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.36 E-value=1.4e-06 Score=97.20 Aligned_cols=132 Identities=17% Similarity=0.195 Sum_probs=72.0
Q ss_pred ccccccccCCCCCC-CCCCCCcCcEEEEcCCHHHHHHHHHHHHC--CCeEEEEeccCccccCCCCcccceeeCchHHHHH
Q 006440 57 TQMKAAVAESPTNN-SDSENKKLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAAL 133 (645)
Q Consensus 57 ~~~~~~~~~~~~~~-~~~~~~~~~v~i~g~g~~g~~~a~~l~~~--g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l 133 (645)
+.+||..+++.... ..+.+...+|+|||||++|+++|..|+++ |++|+|+|+.+... ..+.
T Consensus 15 ~~~np~~g~e~~~~~~~~~~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~-----------~~~~----- 78 (588)
T 3ics_A 15 MTGGQQMGRTLYDDDDKDRWGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYIS-----------FANC----- 78 (588)
T ss_dssp -------------------CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSS-----------BCGG-----
T ss_pred cccchhcCccccCcccCCcccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcc-----------ccCC-----
Confidence 45777777664432 22344567999999999999999999998 89999999975321 1110
Q ss_pred HhcChhHHHHHHHhccccccccccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEE
Q 006440 134 EAIDLDVAEEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVID 213 (645)
Q Consensus 134 ~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~ 213 (645)
++...+. +... . . .... .. .+ +.+.+..+.. ++++++|++
T Consensus 79 -----~lp~~~~--g~~~--------~--~------------~~~~-------~~--~~-~~~~~~~gi~-v~~~~~V~~ 118 (588)
T 3ics_A 79 -----GLPYYIG--GVIT--------E--R------------QKLL-------VQ--TV-ERMSKRFNLD-IRVLSEVVK 118 (588)
T ss_dssp -----GHHHHHT--TSSC--------C--G------------GGGB-------SS--CH-HHHHHHTTCE-EECSEEEEE
T ss_pred -----CCchhhc--CcCC--------C--h------------HHhh-------cc--CH-HHHHHhcCcE-EEECCEEEE
Confidence 2211110 0000 0 0 0000 00 01 1222333433 778999999
Q ss_pred EEeeCCeEEEEE-cCCc--EEeccEEEEccCCch
Q 006440 214 FKDHGDKVSVVL-ENGQ--CYAGDLLIGADGIWS 244 (645)
Q Consensus 214 i~~~~~~v~v~~-~~g~--~i~a~lvVgADG~~S 244 (645)
++.+++.+.+.. .+|+ ++.+|.||.|.|...
T Consensus 119 id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p 152 (588)
T 3ics_A 119 INKEEKTITIKNVTTNETYNEAYDVLILSPGAKP 152 (588)
T ss_dssp EETTTTEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred EECCCCEEEEeecCCCCEEEEeCCEEEECCCCCC
Confidence 998888877765 3555 789999999999743
No 150
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.36 E-value=1.1e-06 Score=95.44 Aligned_cols=133 Identities=14% Similarity=0.167 Sum_probs=70.0
Q ss_pred ccccccccCCCCCCCC-CCCCcCcEEEEcCCHHHHHHHHHHHHC--CCeEEEEeccCccccCCCCcccceeeCchHHHHH
Q 006440 57 TQMKAAVAESPTNNSD-SENKKLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAAL 133 (645)
Q Consensus 57 ~~~~~~~~~~~~~~~~-~~~~~~~v~i~g~g~~g~~~a~~l~~~--g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l 133 (645)
+.+||..+++.....+ .....+||+|||||++|+++|..|++. |++|+|+|+.+.... .+.
T Consensus 15 ~~~np~~g~~~~~~~~~~~~~~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~-----------~~~----- 78 (480)
T 3cgb_A 15 MTGGQQMGRTLYDDDDKDRWGSMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSY-----------AQC----- 78 (480)
T ss_dssp ----------------------CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSB-----------CGG-----
T ss_pred ccchhhhcccccCCCCcCccccceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCC-----------CCC-----
Confidence 4478877766432111 111236999999999999999999996 999999998743210 000
Q ss_pred HhcChhHHHHHHHhccccccccccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEE
Q 006440 134 EAIDLDVAEEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVID 213 (645)
Q Consensus 134 ~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~ 213 (645)
++...+ . +... .. . . .+.+ ..+.+.+..+. .++.+++|+.
T Consensus 79 -----~~~~~~-~-~~~~--~~---------------~-----~--------l~~~--~~~~~~~~~gv-~~~~~~~v~~ 118 (480)
T 3cgb_A 79 -----GLPYVI-S-GAIA--ST---------------E-----K--------LIAR--NVKTFRDKYGI-DAKVRHEVTK 118 (480)
T ss_dssp -----GHHHHH-T-TSSS--CG---------------G-----G--------GBSS--CHHHHHHTTCC-EEESSEEEEE
T ss_pred -----Ccchhh-c-CCcC--CH---------------H-----H--------hhhc--CHHHHHhhcCC-EEEeCCEEEE
Confidence 111000 0 0000 00 0 0 0000 01223233333 4777899999
Q ss_pred EEeeCCeEEEEE-cCCc--EEeccEEEEccCCchh
Q 006440 214 FKDHGDKVSVVL-ENGQ--CYAGDLLIGADGIWSK 245 (645)
Q Consensus 214 i~~~~~~v~v~~-~~g~--~i~a~lvVgADG~~S~ 245 (645)
++.+++.+.+.. .+|+ ++++|.||.|+|....
T Consensus 119 i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~ 153 (480)
T 3cgb_A 119 VDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPV 153 (480)
T ss_dssp EETTTTEEEEEETTTCCEEEEECSEEEECCCEEEC
T ss_pred EECCCCEEEEEEcCCCceEEEEcCEEEECCCCccc
Confidence 988777777765 4565 7999999999997543
No 151
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.34 E-value=1.8e-06 Score=94.66 Aligned_cols=54 Identities=20% Similarity=0.190 Sum_probs=44.7
Q ss_pred HHHHHHHHHcCCceEEcCceEEEEEeeCCeEEEEEcCCcEEeccEEEEccCCchh
Q 006440 191 TLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK 245 (645)
Q Consensus 191 ~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a~lvVgADG~~S~ 245 (645)
.|.+.|.+.++.. ++++++|++|+.+++++.|++.+|++++||.||.|.+....
T Consensus 216 ~l~~~l~~~lg~~-i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~l 269 (520)
T 1s3e_A 216 QVSERIMDLLGDR-VKLERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPPTLG 269 (520)
T ss_dssp HHHHHHHHHHGGG-EESSCCEEEEECSSSSEEEEETTSCEEEESEEEECSCGGGG
T ss_pred HHHHHHHHHcCCc-EEcCCeeEEEEECCCeEEEEECCCeEEEeCEEEECCCHHHH
Confidence 4555556655544 88999999999888889999999999999999999998763
No 152
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.29 E-value=2.2e-06 Score=93.14 Aligned_cols=35 Identities=34% Similarity=0.588 Sum_probs=32.6
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
.++||+|||||++|+++|+.|++.|++|+|+|+.+
T Consensus 5 ~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~ 39 (482)
T 1ojt_A 5 AEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYK 39 (482)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 36899999999999999999999999999999863
No 153
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.26 E-value=5.1e-06 Score=94.78 Aligned_cols=40 Identities=23% Similarity=0.207 Sum_probs=36.4
Q ss_pred eEEcCceEEEEEeeCCeEEEEEcCCcEEeccEEEEccCCc
Q 006440 204 IILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIW 243 (645)
Q Consensus 204 ~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a~lvVgADG~~ 243 (645)
.|+++++|++|+.++++++|++.+|++++||.||.|....
T Consensus 545 ~I~l~t~V~~I~~~~~~v~V~~~~G~~i~Ad~VIvA~P~~ 584 (776)
T 4gut_A 545 DIQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPLA 584 (776)
T ss_dssp CEESSCCEEEEECSSSSEEEEETTCCEEEESEEEECCCHH
T ss_pred cEEcCCeeEEEEEcCCEEEEEECCCcEEEcCEEEECCCHH
Confidence 4889999999999999999999999999999999999653
No 154
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.23 E-value=3.4e-06 Score=91.27 Aligned_cols=35 Identities=34% Similarity=0.580 Sum_probs=32.8
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
.++||+||||||+|+++|..|++.|++|+|+|+.+
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~ 39 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRG 39 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 45899999999999999999999999999999874
No 155
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.21 E-value=3.6e-06 Score=85.47 Aligned_cols=111 Identities=23% Similarity=0.308 Sum_probs=70.5
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEE-EeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLV-FEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~-~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~ 154 (645)
..+||+|||||++|+++|..|+++|++|+| +|+... | |.+. ... .
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~~~-----g---------------------G~~~---~~~-----~ 48 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGMP-----G---------------------GQIT---SSS-----E 48 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSSST-----T---------------------GGGG---GCS-----C
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCCC-----C---------------------ceee---eec-----e
Confidence 357999999999999999999999999999 998321 1 0000 000 0
Q ss_pred cccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCC--ceEEcCceEEEEEeeC--CeEEEEEcCCcE
Q 006440 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGD--EIILNESNVIDFKDHG--DKVSVVLENGQC 230 (645)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~--~~v~v~~~~g~~ 230 (645)
+..+ + +.+ ..+....+...+.+.+.. ..++.+ +|+++ .++ +.+.+.+..+.+
T Consensus 49 ~~~~------------~--------~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i-~~~~~~~~~v~~~~~~~ 104 (315)
T 3r9u_A 49 IENY------------P--------GVA--QVMDGISFMAPWSEQCMRFGLKHEMV-GVEQI-LKNSDGSFTIKLEGGKT 104 (315)
T ss_dssp BCCS------------T--------TCC--SCBCHHHHHHHHHHHHTTTCCEEECC-CEEEE-EECTTSCEEEEETTSCE
T ss_pred eccC------------C--------CCC--CCCCHHHHHHHHHHHHHHcCcEEEEE-EEEEE-ecCCCCcEEEEEecCCE
Confidence 0000 0 000 123445666666655432 236666 88999 666 677753433338
Q ss_pred EeccEEEEccCCch
Q 006440 231 YAGDLLIGADGIWS 244 (645)
Q Consensus 231 i~a~lvVgADG~~S 244 (645)
+.+|.||.|.|...
T Consensus 105 ~~~d~lvlAtG~~~ 118 (315)
T 3r9u_A 105 ELAKAVIVCTGSAP 118 (315)
T ss_dssp EEEEEEEECCCEEE
T ss_pred EEeCEEEEeeCCCC
Confidence 99999999999843
No 156
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.21 E-value=2.8e-06 Score=90.83 Aligned_cols=111 Identities=15% Similarity=0.246 Sum_probs=69.0
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCC--eEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~--~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~ 154 (645)
.+||+|||||++|+++|..|+++|+ +|+|+|+.+..... . + .+ ...
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~---------~-~-----------~l-----~~~------ 51 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHH---------L-P-----------PL-----SKA------ 51 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBC---------S-G-----------GG-----GTT------
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCc---------C-C-----------CC-----cHH------
Confidence 5799999999999999999999999 79999986421100 0 0 00 000
Q ss_pred cccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeCCeEEEEEcCCcEEecc
Q 006440 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGD 234 (645)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a~ 234 (645)
+..+... ..... .. +.+.+ +..+ ..++.+++|+.++.++. .|++.+|+++.+|
T Consensus 52 ---~~~~~~~-----------~~~~~-----~~----~~~~~-~~~g-v~~~~~~~v~~i~~~~~--~v~~~~g~~~~~d 104 (431)
T 1q1r_A 52 ---YLAGKAT-----------AESLY-----LR----TPDAY-AAQN-IQLLGGTQVTAINRDRQ--QVILSDGRALDYD 104 (431)
T ss_dssp ---TTTTCSC-----------SGGGB-----SS----CHHHH-HHTT-EEEECSCCEEEEETTTT--EEEETTSCEEECS
T ss_pred ---HhCCCCC-----------hHHhc-----cc----CHHHH-HhCC-CEEEeCCEEEEEECCCC--EEEECCCCEEECC
Confidence 0000000 00000 00 11222 2223 34778899999986554 5667888899999
Q ss_pred EEEEccCCchhh
Q 006440 235 LLIGADGIWSKV 246 (645)
Q Consensus 235 lvVgADG~~S~v 246 (645)
.||.|+|..+..
T Consensus 105 ~lviAtG~~p~~ 116 (431)
T 1q1r_A 105 RLVLATGGRPRP 116 (431)
T ss_dssp EEEECCCEEECC
T ss_pred EEEEcCCCCccC
Confidence 999999997644
No 157
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.18 E-value=6.6e-06 Score=86.42 Aligned_cols=109 Identities=19% Similarity=0.181 Sum_probs=69.5
Q ss_pred CCcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccc
Q 006440 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (645)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~ 154 (645)
.++.+|+|||||+||+++|..|++.+.+|+|+|+.+..... .+ .+...+ .. ......
T Consensus 7 ~~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~----------~~-----------~l~~~l-~g-~~~~~~ 63 (385)
T 3klj_A 7 HKSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYY----------RP-----------RLNEII-AK-NKSIDD 63 (385)
T ss_dssp -CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBC----------GG-----------GHHHHH-HS-CCCGGG
T ss_pred cCCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcc----------cC-----------hhhHHH-cC-CCCHHH
Confidence 44678999999999999999998889999999987532110 00 121111 10 000000
Q ss_pred cccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeCCeEEEEEcCCcEEecc
Q 006440 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGD 234 (645)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a~ 234 (645)
+ .. ...+.+ +..+. .++.+++|++++.+.. .|++++|+++.+|
T Consensus 64 l------------------------------~~---~~~~~~-~~~~i-~~~~~~~V~~id~~~~--~v~~~~g~~~~yd 106 (385)
T 3klj_A 64 I------------------------------LI---KKNDWY-EKNNI-KVITSEFATSIDPNNK--LVTLKSGEKIKYE 106 (385)
T ss_dssp T------------------------------BS---SCHHHH-HHTTC-EEECSCCEEEEETTTT--EEEETTSCEEECS
T ss_pred c------------------------------cC---CCHHHH-HHCCC-EEEeCCEEEEEECCCC--EEEECCCCEEECC
Confidence 0 00 001111 12233 4788999999987665 5677899999999
Q ss_pred EEEEccCCc
Q 006440 235 LLIGADGIW 243 (645)
Q Consensus 235 lvVgADG~~ 243 (645)
.||.|.|..
T Consensus 107 ~lvlAtG~~ 115 (385)
T 3klj_A 107 KLIIASGSI 115 (385)
T ss_dssp EEEECCCEE
T ss_pred EEEEecCCC
Confidence 999999974
No 158
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.16 E-value=3.5e-05 Score=86.45 Aligned_cols=36 Identities=33% Similarity=0.496 Sum_probs=32.8
Q ss_pred CcCcEEEEcCCHHHHHHHHHHH---H-CCCeEEEEeccCc
Q 006440 76 KKLRILVAGGGIGGLVFALAAK---R-KGFEVLVFEKDMS 111 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~---~-~g~~~~~~~~~~~ 111 (645)
..+||+|||||++|+++|+.|+ + +|.+|+|+||...
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~ 60 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAV 60 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCT
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCC
Confidence 4589999999999999999999 6 8999999999753
No 159
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.11 E-value=5.2e-06 Score=89.41 Aligned_cols=33 Identities=39% Similarity=0.566 Sum_probs=31.6
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEecc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (645)
++||+|||||++|+++|..|++.|++|+|+|+.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 35 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG 35 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 579999999999999999999999999999986
No 160
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.11 E-value=5.2e-06 Score=89.89 Aligned_cols=35 Identities=20% Similarity=0.106 Sum_probs=30.9
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHC--CCeEEEEeccCc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMS 111 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~--g~~~~~~~~~~~ 111 (645)
++||+|||||++|+++|..|+++ |++|+|+|+.+.
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~ 39 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASR 39 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC--
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCc
Confidence 46999999999999999999999 999999999753
No 161
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.11 E-value=2.6e-05 Score=87.37 Aligned_cols=36 Identities=28% Similarity=0.449 Sum_probs=33.0
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHC------CCeEEEEeccCc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRK------GFEVLVFEKDMS 111 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~------g~~~~~~~~~~~ 111 (645)
..+||||||||+|||++|+.|+++ |.+|+|+||...
T Consensus 21 ~~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~ 62 (662)
T 3gyx_A 21 HSVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASL 62 (662)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCT
T ss_pred EEcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCC
Confidence 368999999999999999999998 999999999754
No 162
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.06 E-value=1e-05 Score=87.90 Aligned_cols=34 Identities=21% Similarity=0.310 Sum_probs=32.0
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCC---CeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKG---FEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g---~~~~~~~~~~ 110 (645)
++||+|||||++|+++|..|++.| ++|+|+|+.+
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~ 71 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNS 71 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCC
Confidence 589999999999999999999998 9999999874
No 163
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.05 E-value=2.6e-06 Score=86.71 Aligned_cols=34 Identities=24% Similarity=0.463 Sum_probs=32.3
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEecc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (645)
.+|||+||||||||+++|+.|+++|++|+|+|+.
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~ 38 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIERG 38 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC
Confidence 4699999999999999999999999999999985
No 164
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.04 E-value=3.4e-05 Score=84.42 Aligned_cols=37 Identities=30% Similarity=0.495 Sum_probs=33.9
Q ss_pred CCCcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 74 ENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 74 ~~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
++.++||+||||||+|+++|+.|++.|++|+|+|+.+
T Consensus 29 ~~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 29 KSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp SSCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 4457899999999999999999999999999999864
No 165
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.03 E-value=1.1e-05 Score=86.78 Aligned_cols=33 Identities=27% Similarity=0.580 Sum_probs=31.3
Q ss_pred CcEEEEcCCHHHHHHHHHHHHC--CCeEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~--g~~~~~~~~~~ 110 (645)
+||+|||||++|+++|..|+++ |++|+|+|+.+
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~ 37 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQA 37 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCC
Confidence 5899999999999999999998 99999999975
No 166
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.02 E-value=1.3e-05 Score=88.71 Aligned_cols=110 Identities=21% Similarity=0.260 Sum_probs=68.7
Q ss_pred CcEEEEcCCHHHHHHHHHHHHC--CCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhcccccccc
Q 006440 78 LRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~--g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~ 155 (645)
.+|+|||||++|+++|..|+++ |++|+|+|+.+... ..+. ++...+ . +....
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~-----------~~~~----------~l~~~~-~-~~~~~--- 55 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVS-----------FANC----------GLPYHI-S-GEIAQ--- 55 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSS-----------BCGG----------GHHHHH-T-SSSCC---
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcc-----------cccc----------CchHHh-c-CCcCC---
Confidence 4899999999999999999998 89999999975321 1110 121111 0 00000
Q ss_pred ccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeCCeEEEEE-cCCc--EEe
Q 006440 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVL-ENGQ--CYA 232 (645)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~-~~g~--~i~ 232 (645)
. ... .+. ..+.+.++.+.. ++.+++|++++.+.+.+.+.. .+|+ ++.
T Consensus 56 -------~------------~~~-------~~~---~~~~~~~~~~i~-~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~ 105 (565)
T 3ntd_A 56 -------R------------SAL-------VLQ---TPESFKARFNVE-VRVKHEVVAIDRAAKLVTVRRLLDGSEYQES 105 (565)
T ss_dssp -------G------------GGG-------BCC---CHHHHHHHHCCE-EETTEEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred -------h------------HHh-------hcc---CHHHHHHhcCcE-EEECCEEEEEECCCCEEEEEecCCCCeEEEE
Confidence 0 000 000 012222333433 778999999998888777765 2343 799
Q ss_pred ccEEEEccCCc
Q 006440 233 GDLLIGADGIW 243 (645)
Q Consensus 233 a~lvVgADG~~ 243 (645)
+|.||.|.|..
T Consensus 106 ~d~lviAtG~~ 116 (565)
T 3ntd_A 106 YDTLLLSPGAA 116 (565)
T ss_dssp CSEEEECCCEE
T ss_pred CCEEEECCCCC
Confidence 99999999984
No 167
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.00 E-value=8.5e-06 Score=87.24 Aligned_cols=33 Identities=27% Similarity=0.512 Sum_probs=31.3
Q ss_pred CcEEEEcCCHHHHHHHHHHHH---CCCeEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKR---KGFEVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~---~g~~~~~~~~~~ 110 (645)
.+|+|||||++|+++|..|++ .|++|+|+|+.+
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~ 40 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISAND 40 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCC
Confidence 589999999999999999999 899999999875
No 168
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.00 E-value=1.6e-05 Score=85.33 Aligned_cols=34 Identities=32% Similarity=0.543 Sum_probs=31.7
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHC--CCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~--g~~~~~~~~~~ 110 (645)
.+||+|||||++|+++|..|++. |++|+|+|+.+
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~ 38 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATE 38 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSS
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCC
Confidence 47999999999999999999998 89999999875
No 169
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.99 E-value=2e-05 Score=85.20 Aligned_cols=35 Identities=34% Similarity=0.547 Sum_probs=32.7
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
.++||+||||||+|+++|..|++.|++|+|+|+.+
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 39 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNE 39 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 45899999999999999999999999999999874
No 170
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.98 E-value=1.9e-05 Score=83.66 Aligned_cols=34 Identities=26% Similarity=0.582 Sum_probs=31.3
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCe--EEEEeccCc
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFE--VLVFEKDMS 111 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~--~~~~~~~~~ 111 (645)
.+|+|||||++|+++|..|+++|++ |+|+|+.+.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~ 38 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPH 38 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSS
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCC
Confidence 4899999999999999999999998 999998753
No 171
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.97 E-value=4.3e-05 Score=83.14 Aligned_cols=57 Identities=12% Similarity=0.122 Sum_probs=43.0
Q ss_pred eeCHHHHHHHHHHHcCC--ceEEcCceEEEEEeeC--------CeEEEEEcCC-----cEEeccEEEEccCC
Q 006440 186 VISRMTLQQILAKAVGD--EIILNESNVIDFKDHG--------DKVSVVLENG-----QCYAGDLLIGADGI 242 (645)
Q Consensus 186 ~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~--------~~v~v~~~~g-----~~i~a~lvVgADG~ 242 (645)
...|.++.++|...+.. ..++++++|++++..+ +.++|+..++ +++.|+.||.|.|.
T Consensus 141 ~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 141 LPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGG 212 (501)
T ss_dssp CCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCC
Confidence 35688899988765532 2488999999998654 2478887654 36899999999994
No 172
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.97 E-value=3.3e-05 Score=81.08 Aligned_cols=101 Identities=22% Similarity=0.330 Sum_probs=73.6
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~~ 156 (645)
..+|+|||+|+.|+.+|..|++.|.+|+++|+.+..... .++..+
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~-------------------~~~~~~---------------- 189 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPG-------------------LLHPAA---------------- 189 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-------------------TSCHHH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhc-------------------ccCHHH----------------
Confidence 468999999999999999999999999999986421100 000000
Q ss_pred cccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeCCeEEEEEcCCcEEeccEE
Q 006440 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLL 236 (645)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a~lv 236 (645)
...+.+.|.+ .+ ..++.+++|++++.+++++.|++.+|+++++|.|
T Consensus 190 --------------------------------~~~l~~~l~~-~g-v~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~v 235 (384)
T 2v3a_A 190 --------------------------------AKAVQAGLEG-LG-VRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLV 235 (384)
T ss_dssp --------------------------------HHHHHHHHHT-TT-CEEEESCCEEEEEEETTEEEEEETTSCEEEESEE
T ss_pred --------------------------------HHHHHHHHHH-cC-CEEEeCCEEEEEEecCCEEEEEECCCCEEECCEE
Confidence 0112222222 12 3478899999999888888899999999999999
Q ss_pred EEccCCchhh
Q 006440 237 IGADGIWSKV 246 (645)
Q Consensus 237 VgADG~~S~v 246 (645)
|.|.|..+..
T Consensus 236 v~a~G~~p~~ 245 (384)
T 2v3a_A 236 VSAVGLRPRT 245 (384)
T ss_dssp EECSCEEECC
T ss_pred EECcCCCcCH
Confidence 9999988754
No 173
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.96 E-value=1.6e-05 Score=84.23 Aligned_cols=35 Identities=20% Similarity=0.508 Sum_probs=31.9
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCe--EEEEeccC
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFE--VLVFEKDM 110 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~--~~~~~~~~ 110 (645)
.++||+|||||++|+++|..|++.|++ |+|+|+.+
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 42 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEA 42 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCC
Confidence 357999999999999999999999985 99999874
No 174
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.95 E-value=1.4e-05 Score=84.96 Aligned_cols=35 Identities=34% Similarity=0.694 Sum_probs=32.4
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCe--EEEEeccC
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFE--VLVFEKDM 110 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~--~~~~~~~~ 110 (645)
..+||+|||||++|+++|..|+++|++ |+|+|+.+
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~ 44 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREP 44 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSS
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCC
Confidence 457999999999999999999999998 99999875
No 175
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.94 E-value=4e-05 Score=82.67 Aligned_cols=35 Identities=23% Similarity=0.312 Sum_probs=32.4
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
.++||+||||||+|+++|..|++.|++|+|+|+..
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~ 37 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKG 37 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTS
T ss_pred ccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCC
Confidence 35899999999999999999999999999999753
No 176
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.93 E-value=4.7e-05 Score=81.86 Aligned_cols=100 Identities=27% Similarity=0.358 Sum_probs=73.8
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~~ 156 (645)
..+|+|||||++|+.+|..|++.|.+|+++|+.+..... .+..+
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~--------------------~~~~~---------------- 210 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPT--------------------MDLEV---------------- 210 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT--------------------SCHHH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccc--------------------cCHHH----------------
Confidence 358999999999999999999999999999986421100 00000
Q ss_pred cccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeCCeEEEEEcCCcEEeccEE
Q 006440 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLL 236 (645)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a~lv 236 (645)
...+.+.|.+ .+. .++.+++|++++.+++++.+++++|+++.+|.|
T Consensus 211 --------------------------------~~~l~~~l~~-~Gv-~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~v 256 (455)
T 2yqu_A 211 --------------------------------SRAAERVFKK-QGL-TIRTGVRVTAVVPEAKGARVELEGGEVLEADRV 256 (455)
T ss_dssp --------------------------------HHHHHHHHHH-HTC-EEECSCCEEEEEEETTEEEEEETTSCEEEESEE
T ss_pred --------------------------------HHHHHHHHHH-CCC-EEEECCEEEEEEEeCCEEEEEECCCeEEEcCEE
Confidence 0012233322 233 478899999999888888888888889999999
Q ss_pred EEccCCchhh
Q 006440 237 IGADGIWSKV 246 (645)
Q Consensus 237 VgADG~~S~v 246 (645)
|.|.|..+..
T Consensus 257 v~A~G~~p~~ 266 (455)
T 2yqu_A 257 LVAVGRRPYT 266 (455)
T ss_dssp EECSCEEECC
T ss_pred EECcCCCcCC
Confidence 9999987654
No 177
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.92 E-value=2.5e-05 Score=83.96 Aligned_cols=33 Identities=15% Similarity=0.256 Sum_probs=31.1
Q ss_pred CcEEEEcCCHHHHHHHHHHHHC--CCeEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~--g~~~~~~~~~~ 110 (645)
+||+|||||++|+++|..|++. |++|+|+|+.+
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~ 35 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMND 35 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCC
Confidence 5899999999999999999998 99999999875
No 178
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.91 E-value=3.8e-05 Score=82.43 Aligned_cols=33 Identities=21% Similarity=0.298 Sum_probs=30.8
Q ss_pred CcEEEEcCCHHHHHHHHHHHHC--CCeEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~--g~~~~~~~~~~ 110 (645)
+||+|||||++|+++|..|++. |++|+|+|+.+
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~ 35 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGD 35 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCC
Confidence 4899999999999999999998 99999999874
No 179
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=97.89 E-value=5.8e-06 Score=84.80 Aligned_cols=36 Identities=19% Similarity=0.407 Sum_probs=32.0
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHH--CCCeEEEEeccCc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKR--KGFEVLVFEKDMS 111 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~--~g~~~~~~~~~~~ 111 (645)
..+||+||||||+|+++|+.|++ .|++|+|+|+.+.
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~ 101 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVA 101 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSS
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCC
Confidence 46899999999999999999975 5999999999753
No 180
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.88 E-value=3.1e-05 Score=82.69 Aligned_cols=33 Identities=21% Similarity=0.526 Sum_probs=31.2
Q ss_pred CcEEEEcCCHHHHHHHHHHHH--CCCeEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKR--KGFEVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~--~g~~~~~~~~~~ 110 (645)
.||+|||||++|+++|..|++ .|++|+|+|+.+
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~ 37 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRP 37 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCC
Confidence 589999999999999999999 899999999975
No 181
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.88 E-value=5.2e-06 Score=92.87 Aligned_cols=75 Identities=17% Similarity=0.182 Sum_probs=49.8
Q ss_pred ccccccccccCc-ccccccccCCccccccccccccCCCCCCCCCCCCcCcEEEEcCCHHHHHHHHHHHHCC--------C
Q 006440 31 CIEFSRYDHCIN-YKFRTGTSGQSKNPTQMKAAVAESPTNNSDSENKKLRILVAGGGIGGLVFALAAKRKG--------F 101 (645)
Q Consensus 31 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~g~g~~g~~~a~~l~~~g--------~ 101 (645)
+++|++||. + |.......+...|+ ++......+..... .....+|+|||||++||++|+.|+++| +
T Consensus 14 ~~~i~~ci~--~ac~~~~~~~~~~~~~--v~~~~~~~~~~~~~-~~~~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~ 88 (721)
T 3ayj_A 14 EKKIATTVG--EARLSGINYRHPDSAL--VSYPVAAAAPLGRL-PAGNYRIAIVGGGAGGIAALYELGRLAATLPAGSGI 88 (721)
T ss_dssp --CCCCBHH--HHHHHSTTCCCGGGTT--CCHHHHTTSCCBCC-CSSEEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEE
T ss_pred hhhhhhhHH--HHhccchhcccchhhh--cccccccccccCCC-CCCCCeEEEECCCHHHHHHHHHHHHcCcccccCCCc
Confidence 478999999 5 66655554444444 33111111111111 122468999999999999999999999 9
Q ss_pred eEEEEeccC
Q 006440 102 EVLVFEKDM 110 (645)
Q Consensus 102 ~~~~~~~~~ 110 (645)
+|+|+|+..
T Consensus 89 ~V~v~E~~~ 97 (721)
T 3ayj_A 89 DVQIYEADP 97 (721)
T ss_dssp EEEEECCCT
T ss_pred eEEEEeccC
Confidence 999999875
No 182
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.86 E-value=1.1e-05 Score=82.96 Aligned_cols=33 Identities=33% Similarity=0.406 Sum_probs=31.6
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
+||+|||||++|+.+|+.|+++|++|+|+|+++
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 589999999999999999999999999999875
No 183
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.86 E-value=8e-05 Score=80.82 Aligned_cols=35 Identities=37% Similarity=0.500 Sum_probs=32.5
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
.++||+||||||+|+++|+.|++.|++|+|+|+..
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~ 39 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVE 39 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecc
Confidence 46899999999999999999999999999999853
No 184
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.86 E-value=7.7e-05 Score=80.40 Aligned_cols=101 Identities=26% Similarity=0.322 Sum_probs=72.8
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~~ 156 (645)
..+|+|||||++|+.+|..|++.|.+|+|+|+.+..... ++..+
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~--------------------~~~~~---------------- 212 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQ--------------------GDPET---------------- 212 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT--------------------SCHHH----------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccc--------------------cCHHH----------------
Confidence 368999999999999999999999999999986421100 00000
Q ss_pred cccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeCCeEEEEEc-C--Cc--EE
Q 006440 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLE-N--GQ--CY 231 (645)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~-~--g~--~i 231 (645)
...+.+.|.+ .+ ..++.+++|++++.+++.+.+++. + |+ ++
T Consensus 213 --------------------------------~~~l~~~l~~-~g-V~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i 258 (464)
T 2eq6_A 213 --------------------------------AALLRRALEK-EG-IRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEV 258 (464)
T ss_dssp --------------------------------HHHHHHHHHH-TT-CEEECSEEEEEEEEETTEEEEEEEETTCCSCEEE
T ss_pred --------------------------------HHHHHHHHHh-cC-CEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEE
Confidence 0112233322 23 347889999999988888888876 6 76 89
Q ss_pred eccEEEEccCCchhhh
Q 006440 232 AGDLLIGADGIWSKVR 247 (645)
Q Consensus 232 ~a~lvVgADG~~S~vR 247 (645)
.+|+||.|.|..+.+.
T Consensus 259 ~~D~vv~a~G~~p~~~ 274 (464)
T 2eq6_A 259 VVDKVLVAVGRKPRTE 274 (464)
T ss_dssp EESEEEECSCEEESCT
T ss_pred EcCEEEECCCcccCCC
Confidence 9999999999876543
No 185
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.84 E-value=4.6e-05 Score=80.59 Aligned_cols=33 Identities=18% Similarity=0.479 Sum_probs=31.2
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCC--eEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~--~~~~~~~~~ 110 (645)
.+|+|||||++|+++|..|+++|+ +|+|+|+.+
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~ 36 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEK 36 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSS
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCC
Confidence 589999999999999999999999 899999975
No 186
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.84 E-value=4.3e-05 Score=79.69 Aligned_cols=33 Identities=27% Similarity=0.474 Sum_probs=30.4
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
..||+||||||+|+++|..|++.| +|+|+|+.+
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~ 40 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEP 40 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSS
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCC
Confidence 469999999999999999999999 999999875
No 187
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.83 E-value=7.6e-06 Score=89.00 Aligned_cols=36 Identities=25% Similarity=0.473 Sum_probs=32.4
Q ss_pred CCcCcEEEEcCCHHHHHHHHHHHHC--CCeEEEEeccC
Q 006440 75 NKKLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDM 110 (645)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~--g~~~~~~~~~~ 110 (645)
+..+||+|||||++|+++|..|+++ |++|+|||+.+
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~ 46 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDP 46 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSS
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 4468999999999999999999887 89999999875
No 188
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.83 E-value=0.00012 Score=79.33 Aligned_cols=35 Identities=29% Similarity=0.388 Sum_probs=32.3
Q ss_pred CCcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEecc
Q 006440 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (645)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (645)
...+||+||||||+|+++|+.|++.|++|+|+|+.
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~ 41 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFV 41 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEec
Confidence 34689999999999999999999999999999964
No 189
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=97.82 E-value=8.9e-06 Score=88.88 Aligned_cols=53 Identities=13% Similarity=0.119 Sum_probs=39.9
Q ss_pred HHHHHHHHHHcCCc--eEEcCceEEEEEeeCCeEEEEEcCCcEEeccEEEEccCCch
Q 006440 190 MTLQQILAKAVGDE--IILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWS 244 (645)
Q Consensus 190 ~~l~~~L~~~~~~~--~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a~lvVgADG~~S 244 (645)
..|.+.|.+.+... .++.+++|++|..+++. +++.+|+++.||.||.+--...
T Consensus 222 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~~--v~~~~G~~~~ad~vI~t~P~~~ 276 (513)
T 4gde_A 222 GGIWIAVANTLPKEKTRFGEKGKVTKVNANNKT--VTLQDGTTIGYKKLVSTMAVDF 276 (513)
T ss_dssp HHHHHHHHHTSCGGGEEESGGGCEEEEETTTTE--EEETTSCEEEEEEEEECSCHHH
T ss_pred HHHHHHHHHHHHhcCeeeecceEEEEEEccCCE--EEEcCCCEEECCEEEECCCHHH
Confidence 45667777766542 58889999999877665 5678999999999997755443
No 190
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=97.79 E-value=4.6e-05 Score=81.26 Aligned_cols=33 Identities=21% Similarity=0.475 Sum_probs=29.9
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCC--CeEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRKG--FEVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g--~~~~~~~~~~ 110 (645)
.+|+|||||++|+++|..|++.+ ++|+|||+++
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~ 37 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRP 37 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCC
Confidence 47999999999999999999875 8999999874
No 191
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.78 E-value=7.2e-05 Score=81.43 Aligned_cols=34 Identities=35% Similarity=0.431 Sum_probs=31.9
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHC---CCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRK---GFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~---g~~~~~~~~~~ 110 (645)
++||+|||||++|+++|..|+++ |++|+|+|+..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC
Confidence 47999999999999999999999 99999999874
No 192
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.78 E-value=0.00013 Score=79.90 Aligned_cols=35 Identities=34% Similarity=0.518 Sum_probs=32.7
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (645)
+|||+||||||+|+.+|..+++.|.+|+|+|+...
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~ 76 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKP 76 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecccc
Confidence 58999999999999999999999999999998653
No 193
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.76 E-value=0.00012 Score=78.43 Aligned_cols=100 Identities=21% Similarity=0.208 Sum_probs=72.2
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~~ 156 (645)
..+|+|||||+.|+.+|..|++.|.+|+++|+.+.... .++..+
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~--------------------~~~~~~---------------- 210 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLP--------------------SFDPMI---------------- 210 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST--------------------TSCHHH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhh--------------------hhhHHH----------------
Confidence 35899999999999999999999999999998642110 010000
Q ss_pred cccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeCCe-EEEEEcCCcEEeccE
Q 006440 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDK-VSVVLENGQCYAGDL 235 (645)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~-v~v~~~~g~~i~a~l 235 (645)
...+.+.|.+ .+. .++.+++|++++.++++ +.|++.+|+++.+|.
T Consensus 211 --------------------------------~~~l~~~l~~-~Gv-~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~ 256 (450)
T 1ges_A 211 --------------------------------SETLVEVMNA-EGP-QLHTNAIPKAVVKNTDGSLTLELEDGRSETVDC 256 (450)
T ss_dssp --------------------------------HHHHHHHHHH-HSC-EEECSCCEEEEEECTTSCEEEEETTSCEEEESE
T ss_pred --------------------------------HHHHHHHHHH-CCC-EEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCE
Confidence 0122233322 233 37889999999876554 788899998999999
Q ss_pred EEEccCCchhh
Q 006440 236 LIGADGIWSKV 246 (645)
Q Consensus 236 vVgADG~~S~v 246 (645)
||.|.|..+.+
T Consensus 257 vv~a~G~~p~~ 267 (450)
T 1ges_A 257 LIWAIGREPAN 267 (450)
T ss_dssp EEECSCEEESC
T ss_pred EEECCCCCcCC
Confidence 99999987654
No 194
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.76 E-value=0.00013 Score=77.25 Aligned_cols=33 Identities=36% Similarity=0.510 Sum_probs=31.1
Q ss_pred CcEEEEcCCHHHHHHHHHHHH---CCCeEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKR---KGFEVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~---~g~~~~~~~~~~ 110 (645)
.+|+|||||++|+++|..|++ .|++|+|+|+++
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~ 37 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSR 37 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCC
Confidence 479999999999999999999 999999999875
No 195
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.76 E-value=4.5e-05 Score=82.91 Aligned_cols=37 Identities=22% Similarity=0.420 Sum_probs=33.2
Q ss_pred CCCcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 74 ENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 74 ~~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
...+.+|||||||++|+.+|..|++.+++|+|||+++
T Consensus 39 ~~~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 39 HSDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp SCSSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSS
T ss_pred CCCCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCC
Confidence 3445689999999999999999999999999999874
No 196
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.74 E-value=4.4e-05 Score=80.11 Aligned_cols=34 Identities=18% Similarity=0.356 Sum_probs=30.8
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCC--CeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKG--FEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g--~~~~~~~~~~ 110 (645)
.+||+|||||++|+++|..|++.| .+|+++|++.
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 579999999999999999999999 5689999864
No 197
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.71 E-value=0.00018 Score=77.43 Aligned_cols=100 Identities=21% Similarity=0.167 Sum_probs=72.9
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~~ 156 (645)
..+|+|||||..|+.+|..|++.|.+|+++|+.+.... .++..+.
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~--------------------~~~~~~~--------------- 210 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLF--------------------QFDPLLS--------------- 210 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST--------------------TSCHHHH---------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcccc--------------------ccCHHHH---------------
Confidence 35899999999999999999999999999998642110 0100000
Q ss_pred cccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeCCeEEEEEcCCc-EEeccE
Q 006440 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQ-CYAGDL 235 (645)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~-~i~a~l 235 (645)
..+.+.|.+ .+ ..++.+++|++++.+++++.|++.+|+ ++.+|.
T Consensus 211 ---------------------------------~~l~~~l~~-~g-v~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~ 255 (463)
T 2r9z_A 211 ---------------------------------ATLAENMHA-QG-IETHLEFAVAALERDAQGTTLVAQDGTRLEGFDS 255 (463)
T ss_dssp ---------------------------------HHHHHHHHH-TT-CEEESSCCEEEEEEETTEEEEEETTCCEEEEESE
T ss_pred ---------------------------------HHHHHHHHH-CC-CEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCE
Confidence 012222322 23 347889999999987777889999998 899999
Q ss_pred EEEccCCchhh
Q 006440 236 LIGADGIWSKV 246 (645)
Q Consensus 236 vVgADG~~S~v 246 (645)
||.|.|..+.+
T Consensus 256 vv~a~G~~p~~ 266 (463)
T 2r9z_A 256 VIWAVGRAPNT 266 (463)
T ss_dssp EEECSCEEESC
T ss_pred EEECCCCCcCC
Confidence 99999986543
No 198
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.71 E-value=2.6e-05 Score=83.79 Aligned_cols=35 Identities=23% Similarity=0.323 Sum_probs=33.0
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
..+||+|||||++||++|..|+++|++|+|+|++.
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~ 44 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQD 44 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 46899999999999999999999999999999975
No 199
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.69 E-value=3.1e-05 Score=80.46 Aligned_cols=35 Identities=37% Similarity=0.602 Sum_probs=32.8
Q ss_pred CCcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEecc
Q 006440 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (645)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (645)
...+||+|||||++|+++|+.|+++|++|+|+|++
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~ 76 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEAN 76 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEecc
Confidence 34679999999999999999999999999999987
No 200
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.68 E-value=0.0001 Score=78.76 Aligned_cols=32 Identities=34% Similarity=0.590 Sum_probs=29.3
Q ss_pred cEEEEcCCHHHHHHHHHHHHCC--CeEEEEeccC
Q 006440 79 RILVAGGGIGGLVFALAAKRKG--FEVLVFEKDM 110 (645)
Q Consensus 79 ~v~i~g~g~~g~~~a~~l~~~g--~~~~~~~~~~ 110 (645)
+|+||||||+|+++|..|++.| .+|+|+|+++
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~ 35 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDR 35 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCC
Confidence 6999999999999999999988 5799999874
No 201
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.66 E-value=2.9e-05 Score=84.44 Aligned_cols=37 Identities=35% Similarity=0.517 Sum_probs=31.6
Q ss_pred CCCcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 74 ENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 74 ~~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
+++++||+||||||+|+++|+.|+++|++|+|+|+..
T Consensus 22 ~m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~ 58 (491)
T 3urh_A 22 SMMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRS 58 (491)
T ss_dssp ----CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred hcccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 3456999999999999999999999999999999863
No 202
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.65 E-value=0.00044 Score=74.30 Aligned_cols=141 Identities=11% Similarity=0.043 Sum_probs=81.2
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHC--CCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~--g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~ 154 (645)
..+|+|||||..|+-+|..|++. |.+|+++++.+............-...+.....+..+.......+.+.....
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~--- 303 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNT--- 303 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGG---
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhcc---
Confidence 46899999999999999999999 9999999987542211100000011234444445555332222222211000
Q ss_pred cccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHc---CCceEEcCceEEEEEeeCCeEEEEEc---CC
Q 006440 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHGDKVSVVLE---NG 228 (645)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~v~v~~~---~g 228 (645)
. +... .. .+-....+....+.+ ....++.+++|++++.+++++.|++. +|
T Consensus 304 ~---~~~~------~~---------------~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g 359 (463)
T 3s5w_A 304 N---YSVV------DT---------------DLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQGIELALRDAGSG 359 (463)
T ss_dssp T---SSCB------CH---------------HHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTEEEEEEEETTTC
T ss_pred C---CCcC------CH---------------HHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCEEEEEEEEcCCC
Confidence 0 0000 00 000111122222222 23358899999999998888888887 66
Q ss_pred c--EEeccEEEEccCCch
Q 006440 229 Q--CYAGDLLIGADGIWS 244 (645)
Q Consensus 229 ~--~i~a~lvVgADG~~S 244 (645)
+ ++.+|+||.|.|...
T Consensus 360 ~~~~~~~D~Vv~AtG~~p 377 (463)
T 3s5w_A 360 ELSVETYDAVILATGYER 377 (463)
T ss_dssp CEEEEEESEEEECCCEEC
T ss_pred CeEEEECCEEEEeeCCCC
Confidence 5 499999999999753
No 203
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.64 E-value=2.9e-05 Score=84.20 Aligned_cols=34 Identities=29% Similarity=0.345 Sum_probs=32.1
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEecc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (645)
..+||+||||||+|+++|+.|+++|++|+|+|+.
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~ 58 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEEY 58 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCC
Confidence 3689999999999999999999999999999984
No 204
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.63 E-value=4e-05 Score=81.48 Aligned_cols=53 Identities=9% Similarity=0.077 Sum_probs=41.6
Q ss_pred HHHHHHHHHcCCceEEcCceEEEEEeeCCeEEEEEcCCcEEeccEEEEccCCchh
Q 006440 191 TLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK 245 (645)
Q Consensus 191 ~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a~lvVgADG~~S~ 245 (645)
.+.+.|.+.++.. ++.+++|++|+.+++++.|++.+|+ ++||.||.|-+..-.
T Consensus 207 ~l~~~l~~~l~~~-v~~~~~V~~i~~~~~~v~v~~~~g~-~~ad~Vv~a~~~~~~ 259 (424)
T 2b9w_A 207 AMFEHLNATLEHP-AERNVDITRITREDGKVHIHTTDWD-RESDVLVLTVPLEKF 259 (424)
T ss_dssp HHHHHHHHHSSSC-CBCSCCEEEEECCTTCEEEEESSCE-EEESEEEECSCHHHH
T ss_pred HHHHHHHHhhcce-EEcCCEEEEEEEECCEEEEEECCCe-EEcCEEEECCCHHHH
Confidence 3445555555543 7789999999988888999888875 899999999998744
No 205
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.59 E-value=3.6e-05 Score=83.37 Aligned_cols=36 Identities=36% Similarity=0.433 Sum_probs=33.2
Q ss_pred CCCcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEecc
Q 006440 74 ENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (645)
Q Consensus 74 ~~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (645)
.+..+||+||||||+|+++|+.|+++|++|+|+|+.
T Consensus 17 ~~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~ 52 (478)
T 3dk9_A 17 AVASYDYLVIGGGSGGLASARRAAELGARAAVVESH 52 (478)
T ss_dssp CEEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Confidence 345689999999999999999999999999999975
No 206
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.57 E-value=0.00031 Score=75.97 Aligned_cols=100 Identities=27% Similarity=0.299 Sum_probs=70.0
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~~ 156 (645)
..+|+|||||+.|+.+|..|++.|.+|+++|+.+..... ++..+
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~--------------------~~~~~---------------- 226 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS--------------------MDGEV---------------- 226 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS--------------------SCHHH----------------
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc--------------------cCHHH----------------
Confidence 468999999999999999999999999999987432110 00000
Q ss_pred cccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEe--eCCeEEEEEc-----CCc
Q 006440 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKD--HGDKVSVVLE-----NGQ 229 (645)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~--~~~~v~v~~~-----~g~ 229 (645)
...+.+.|.+ .+ ..++.+++|++++. +++.+.+++. +++
T Consensus 227 --------------------------------~~~l~~~l~~-~g-v~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~ 272 (478)
T 1v59_A 227 --------------------------------AKATQKFLKK-QG-LDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQE 272 (478)
T ss_dssp --------------------------------HHHHHHHHHH-TT-CEEECSEEEEEEEEETTTTEEEEEEEETTTTEEE
T ss_pred --------------------------------HHHHHHHHHH-CC-CEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCce
Confidence 0112222222 23 34778899999987 5666777776 356
Q ss_pred EEeccEEEEccCCchhh
Q 006440 230 CYAGDLLIGADGIWSKV 246 (645)
Q Consensus 230 ~i~a~lvVgADG~~S~v 246 (645)
++.+|.||.|.|.....
T Consensus 273 ~~~~D~vv~a~G~~p~~ 289 (478)
T 1v59_A 273 NLEAEVLLVAVGRRPYI 289 (478)
T ss_dssp EEEESEEEECSCEEECC
T ss_pred EEECCEEEECCCCCcCC
Confidence 89999999999987544
No 207
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.57 E-value=3.7e-05 Score=84.18 Aligned_cols=56 Identities=18% Similarity=0.167 Sum_probs=43.7
Q ss_pred HHHHHHHHHHcCCceEEcCceEEEEEee-CCeEEEEEcCCcEEeccEEEEccCCchh
Q 006440 190 MTLQQILAKAVGDEIILNESNVIDFKDH-GDKVSVVLENGQCYAGDLLIGADGIWSK 245 (645)
Q Consensus 190 ~~l~~~L~~~~~~~~i~~~~~v~~i~~~-~~~v~v~~~~g~~i~a~lvVgADG~~S~ 245 (645)
..+.+.|.+.++...|+++++|++|..+ ++++.|++.+|++++||.||.|.+....
T Consensus 202 ~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~p~~~l 258 (516)
T 1rsg_A 202 DSVVQRIAQSFPQNWLKLSCEVKSITREPSKNVTVNCEDGTVYNADYVIITVPQSVL 258 (516)
T ss_dssp HHHHHHHHTTSCGGGEETTCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCCHHHH
T ss_pred HHHHHHHHHhCCCCEEEECCEEEEEEEcCCCeEEEEECCCcEEECCEEEECCCHHHh
Confidence 3445555555544458999999999986 6679999999989999999999987543
No 208
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.57 E-value=0.00034 Score=75.06 Aligned_cols=99 Identities=18% Similarity=0.265 Sum_probs=70.2
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~~ 156 (645)
..+|+|||||++|+.+|..|++.|.+|+++|+.+.... .++..+
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~--------------------~~~~~~---------------- 213 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILS--------------------GFEKQM---------------- 213 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST--------------------TSCHHH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc--------------------ccCHHH----------------
Confidence 46899999999999999999999999999998642110 000000
Q ss_pred cccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeCCeEEEEEc---CCcEEec
Q 006440 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLE---NGQCYAG 233 (645)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~---~g~~i~a 233 (645)
...+.+.|.+ .+ ..++.+++|++++.+++++.+++. +++++.+
T Consensus 214 --------------------------------~~~l~~~l~~-~g-v~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~ 259 (455)
T 1ebd_A 214 --------------------------------AAIIKKRLKK-KG-VEVVTNALAKGAEEREDGVTVTYEANGETKTIDA 259 (455)
T ss_dssp --------------------------------HHHHHHHHHH-TT-CEEEESEEEEEEEEETTEEEEEEEETTEEEEEEE
T ss_pred --------------------------------HHHHHHHHHH-CC-CEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEc
Confidence 0112233322 23 337789999999888777777765 4568999
Q ss_pred cEEEEccCCchh
Q 006440 234 DLLIGADGIWSK 245 (645)
Q Consensus 234 ~lvVgADG~~S~ 245 (645)
|.||.|.|....
T Consensus 260 D~vv~a~G~~p~ 271 (455)
T 1ebd_A 260 DYVLVTVGRRPN 271 (455)
T ss_dssp SEEEECSCEEES
T ss_pred CEEEECcCCCcc
Confidence 999999998654
No 209
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.56 E-value=5.9e-05 Score=81.87 Aligned_cols=53 Identities=17% Similarity=0.227 Sum_probs=44.3
Q ss_pred HHHHHHHHHcCCceEEcCceEEEEEeeCCeEEEEEcCC---cEEeccEEEEccCCc
Q 006440 191 TLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENG---QCYAGDLLIGADGIW 243 (645)
Q Consensus 191 ~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g---~~i~a~lvVgADG~~ 243 (645)
.|.+.|.+.++...++++++|++|+.+++++.|++.+| ++++||.||.|....
T Consensus 240 ~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~~~~ad~vI~a~p~~ 295 (489)
T 2jae_A 240 RIYYAFQDRIGTDNIVFGAEVTSMKNVSEGVTVEYTAGGSKKSITADYAICTIPPH 295 (489)
T ss_dssp HHHHHHHHHHCGGGEETTCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCHH
T ss_pred HHHHHHHHhcCCCeEEECCEEEEEEEcCCeEEEEEecCCeEEEEECCEEEECCCHH
Confidence 46777777776344889999999999999999998876 679999999999875
No 210
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.56 E-value=5.5e-05 Score=79.28 Aligned_cols=36 Identities=28% Similarity=0.476 Sum_probs=33.3
Q ss_pred CCcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
...+||+|||||++|+++|+.|+++|++|+|+|+++
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~ 62 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRP 62 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccC
Confidence 346899999999999999999999999999999864
No 211
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.56 E-value=3.9e-05 Score=82.38 Aligned_cols=56 Identities=14% Similarity=0.032 Sum_probs=43.2
Q ss_pred HHHHHHHHHcCCceEEcCceEEEEEeeCCe-EEEEEcCCcEEeccEEEEccCCchhhhhh
Q 006440 191 TLQQILAKAVGDEIILNESNVIDFKDHGDK-VSVVLENGQCYAGDLLIGADGIWSKVRKN 249 (645)
Q Consensus 191 ~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~-v~v~~~~g~~i~a~lvVgADG~~S~vR~~ 249 (645)
.|.+.|.+.++.. ++++++|++|..++++ +.|++ +|++++||.||.|-+.. .+.+.
T Consensus 216 ~l~~~l~~~lg~~-i~~~~~V~~i~~~~~~~v~v~~-~~~~~~ad~VI~a~p~~-~~~~l 272 (453)
T 2yg5_A 216 QVSIRMAEALGDD-VFLNAPVRTVKWNESGATVLAD-GDIRVEASRVILAVPPN-LYSRI 272 (453)
T ss_dssp HHHHHHHHHHGGG-EECSCCEEEEEEETTEEEEEET-TTEEEEEEEEEECSCGG-GGGGS
T ss_pred HHHHHHHHhcCCc-EEcCCceEEEEEeCCceEEEEE-CCeEEEcCEEEEcCCHH-HHhcC
Confidence 4555566666544 8899999999998888 88776 67789999999999987 34443
No 212
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.55 E-value=5.1e-05 Score=80.10 Aligned_cols=35 Identities=29% Similarity=0.448 Sum_probs=32.7
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHC-CCeEEEEeccC
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRK-GFEVLVFEKDM 110 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~-g~~~~~~~~~~ 110 (645)
..+||+|||||++|+++|..|+++ |++|+|+|+++
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~ 41 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRP 41 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 368999999999999999999999 99999999874
No 213
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=97.53 E-value=0.00028 Score=74.29 Aligned_cols=33 Identities=33% Similarity=0.491 Sum_probs=29.5
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCC--CeEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRKG--FEVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g--~~~~~~~~~~ 110 (645)
.+|+|||||++|+++|..|++.| .+|+|||+++
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~ 37 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNE 37 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCC
Confidence 47999999999999999998876 5899999874
No 214
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.52 E-value=5.3e-05 Score=81.94 Aligned_cols=35 Identities=31% Similarity=0.564 Sum_probs=32.9
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
.++||+||||||+|+++|+.|+++|++|+|+|+.+
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~ 36 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYK 36 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCB
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 36899999999999999999999999999999975
No 215
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.51 E-value=5.5e-05 Score=81.73 Aligned_cols=53 Identities=19% Similarity=0.126 Sum_probs=39.2
Q ss_pred HHHHHHHHcC--CceEEcCceEEEEEeeCCe-EEEEEcCCcEEeccEEEEccCCchh
Q 006440 192 LQQILAKAVG--DEIILNESNVIDFKDHGDK-VSVVLENGQCYAGDLLIGADGIWSK 245 (645)
Q Consensus 192 l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~-v~v~~~~g~~i~a~lvVgADG~~S~ 245 (645)
|.+.|.+.+. ...|+++++|++|+.++++ +.|++ ++.+++||.||.|-+....
T Consensus 236 l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~-~~~~~~ad~vv~a~p~~~~ 291 (477)
T 3nks_A 236 LPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSL-RDSSLEADHVISAIPASVL 291 (477)
T ss_dssp HHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEEC-SSCEEEESEEEECSCHHHH
T ss_pred HHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEE-CCeEEEcCEEEECCCHHHH
Confidence 4555555442 2358999999999987766 77766 4557999999999987644
No 216
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.51 E-value=5.3e-05 Score=81.65 Aligned_cols=34 Identities=29% Similarity=0.361 Sum_probs=31.9
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEecc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (645)
.++||+||||||+|+++|+.|+++|++|+|+|+.
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~ 37 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEF 37 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 3589999999999999999999999999999983
No 217
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.49 E-value=0.00034 Score=75.71 Aligned_cols=100 Identities=21% Similarity=0.185 Sum_probs=71.9
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~~ 156 (645)
..+|+|||||+.|+.+|..|++.|.+|+|+|+.+.... .++..+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~--------------------~~~~~~~--------------- 229 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ--------------------GADRDLV--------------- 229 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSST--------------------TSCHHHH---------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc--------------------ccCHHHH---------------
Confidence 46899999999999999999999999999998642110 0110000
Q ss_pred cccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeCCeEEEEEcC----CcEEe
Q 006440 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLEN----GQCYA 232 (645)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~----g~~i~ 232 (645)
..+.+.|.+ .+ ..++.+++|++++.+++.+.|++.+ |+++.
T Consensus 230 ---------------------------------~~l~~~l~~-~g-V~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~ 274 (482)
T 1ojt_A 230 ---------------------------------KVWQKQNEY-RF-DNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQR 274 (482)
T ss_dssp ---------------------------------HHHHHHHGG-GE-EEEECSCEEEEEEEETTEEEEEEESSSCCSSCEE
T ss_pred ---------------------------------HHHHHHHHh-cC-CEEEECCEEEEEEEcCCeEEEEEeccCCCceEEE
Confidence 012222221 12 2478899999999887778888877 77899
Q ss_pred ccEEEEccCCchhh
Q 006440 233 GDLLIGADGIWSKV 246 (645)
Q Consensus 233 a~lvVgADG~~S~v 246 (645)
+|.||.|.|.....
T Consensus 275 ~D~vv~a~G~~p~~ 288 (482)
T 1ojt_A 275 YDAVLVAAGRAPNG 288 (482)
T ss_dssp ESCEEECCCEEECG
T ss_pred cCEEEECcCCCcCC
Confidence 99999999987654
No 218
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.49 E-value=0.00057 Score=73.84 Aligned_cols=100 Identities=18% Similarity=0.206 Sum_probs=71.5
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~~ 156 (645)
..+|+|||||+.|+.+|..|++.|.+|+++|+.+.... .++..+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~--------------------~~d~~~~--------------- 229 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLR--------------------KFDECIQ--------------- 229 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCT--------------------TSCHHHH---------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcccc--------------------ccCHHHH---------------
Confidence 35899999999999999999999999999998642111 0110110
Q ss_pred cccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeCCe--EEEEEcCC-cEEec
Q 006440 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDK--VSVVLENG-QCYAG 233 (645)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~--v~v~~~~g-~~i~a 233 (645)
..+.+.|.+ .+. .++.+++|++++.++++ +.|++++| +++.+
T Consensus 230 ---------------------------------~~l~~~l~~-~Gv-~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~ 274 (479)
T 2hqm_A 230 ---------------------------------NTITDHYVK-EGI-NVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDV 274 (479)
T ss_dssp ---------------------------------HHHHHHHHH-HTC-EEECSCCEEEEEECC-CCCEEEEETTSCEEEEE
T ss_pred ---------------------------------HHHHHHHHh-CCe-EEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEc
Confidence 022333322 233 37889999999876554 78889999 78999
Q ss_pred cEEEEccCCchhh
Q 006440 234 DLLIGADGIWSKV 246 (645)
Q Consensus 234 ~lvVgADG~~S~v 246 (645)
|.||.|.|.....
T Consensus 275 D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 275 DELIWTIGRKSHL 287 (479)
T ss_dssp SEEEECSCEEECC
T ss_pred CEEEECCCCCCcc
Confidence 9999999986544
No 219
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.49 E-value=0.00052 Score=73.45 Aligned_cols=35 Identities=26% Similarity=0.231 Sum_probs=32.2
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
...+|+|||||++|+.+|..|++.|.+|+++|+.+
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 182 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILD 182 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCc
Confidence 35789999999999999999999999999999864
No 220
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.48 E-value=7.3e-05 Score=81.19 Aligned_cols=109 Identities=17% Similarity=0.240 Sum_probs=69.0
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhcccccccc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~ 155 (645)
..+||+|||||++|+++|+.|+++ ++|+|+|+.+.. .|. .. .... ..
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~---GG~----~~---------------------~~~~----~~ 153 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWL---GGD----MW---------------------LKGI----KQ 153 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSS---SCS----GG---------------------GTCS----EE
T ss_pred ccCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCC---CCe----ee---------------------cccc----cc
Confidence 357999999999999999999999 999999987521 010 00 0000 00
Q ss_pred ccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcC-CceEEcCceEEEEEeeCCeEEEEE-cCCc--EE
Q 006440 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG-DEIILNESNVIDFKDHGDKVSVVL-ENGQ--CY 231 (645)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~-~~~i~~~~~v~~i~~~~~~v~v~~-~~g~--~i 231 (645)
.+.+. ...++...+.+.+. ...++.+++++++..+++.+.+.. .+++ .+
T Consensus 154 -----------------------~g~~~----~~~~~~~~l~~~l~~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~ 206 (493)
T 1y56_A 154 -----------------------EGFNK----DSRKVVEELVGKLNENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEI 206 (493)
T ss_dssp -----------------------TTTTE----EHHHHHHHHHHTCCTTEEEETTEEECCCEECSSSEEEEEEETTEEEEE
T ss_pred -----------------------CCCCC----CHHHHHHHHHHHHhcCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEE
Confidence 00000 12233344444432 224677888888887776665544 4454 68
Q ss_pred eccEEEEccCCch
Q 006440 232 AGDLLIGADGIWS 244 (645)
Q Consensus 232 ~a~lvVgADG~~S 244 (645)
.+|.||.|.|...
T Consensus 207 ~~d~lvlAtGa~~ 219 (493)
T 1y56_A 207 LAKRVVLATGAID 219 (493)
T ss_dssp EESCEEECCCEEE
T ss_pred ECCEEEECCCCCc
Confidence 9999999999764
No 221
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.46 E-value=0.00066 Score=73.47 Aligned_cols=100 Identities=26% Similarity=0.363 Sum_probs=73.9
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~~ 156 (645)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.... .++..+
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~--------------------~~~~~~---------------- 234 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILR--------------------NFDYDL---------------- 234 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST--------------------TSCHHH----------------
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCcccc--------------------ccCHHH----------------
Confidence 46899999999999999999999999999998642110 000000
Q ss_pred cccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeCCeEEEEEcCCcEEeccEE
Q 006440 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLL 236 (645)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a~lv 236 (645)
...+.+.|.+ .+. .++.+++|++++.+++++.|++.+|+++.+|.|
T Consensus 235 --------------------------------~~~l~~~l~~-~Gv-~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~V 280 (484)
T 3o0h_A 235 --------------------------------RQLLNDAMVA-KGI-SIIYEATVSQVQSTENCYNVVLTNGQTICADRV 280 (484)
T ss_dssp --------------------------------HHHHHHHHHH-HTC-EEESSCCEEEEEECSSSEEEEETTSCEEEESEE
T ss_pred --------------------------------HHHHHHHHHH-CCC-EEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEE
Confidence 0113333322 233 378899999999888888999999999999999
Q ss_pred EEccCCchhh
Q 006440 237 IGADGIWSKV 246 (645)
Q Consensus 237 VgADG~~S~v 246 (645)
|.|.|..+..
T Consensus 281 i~A~G~~p~~ 290 (484)
T 3o0h_A 281 MLATGRVPNT 290 (484)
T ss_dssp EECCCEEECC
T ss_pred EEeeCCCcCC
Confidence 9999986543
No 222
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.44 E-value=0.00011 Score=79.87 Aligned_cols=55 Identities=7% Similarity=0.031 Sum_probs=43.6
Q ss_pred HHHHHHHHHcCC---ceEEcCceEEEEEeeCCeEEEEEcCCcEEeccEEEEccCCchh
Q 006440 191 TLQQILAKAVGD---EIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK 245 (645)
Q Consensus 191 ~l~~~L~~~~~~---~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a~lvVgADG~~S~ 245 (645)
.+.+.|.+.+.. ..++++++|++|+.+++++.|++.+|++++||.||.|-|....
T Consensus 256 ~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l 313 (495)
T 2vvm_A 256 AFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLNVL 313 (495)
T ss_dssp HHHHHHHHHHHTTTCEEEESSCCEEEEEECSSSEEEEETTCCEEEEEEEEECCCGGGG
T ss_pred HHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHHHH
Confidence 445555555432 3488999999999888889999999988999999999998654
No 223
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.43 E-value=8.4e-05 Score=80.96 Aligned_cols=36 Identities=36% Similarity=0.548 Sum_probs=32.8
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (645)
..+||+|||||++||++|+.|+++|++|+|+|+...
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~ 47 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGK 47 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCC
Confidence 457999999999999999999999999999999754
No 224
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.42 E-value=9.8e-05 Score=79.20 Aligned_cols=36 Identities=33% Similarity=0.477 Sum_probs=33.1
Q ss_pred CCcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
...++|+||||||+|+++|..|++.|++|+|||+.+
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~ 155 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYD 155 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccC
Confidence 346799999999999999999999999999999874
No 225
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.42 E-value=0.0001 Score=77.37 Aligned_cols=34 Identities=26% Similarity=0.507 Sum_probs=32.1
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
++||+|||||++|+++|..|+++|++|+|+|++.
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~ 36 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRD 36 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecC
Confidence 4799999999999999999999999999999865
No 226
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.42 E-value=6.3e-05 Score=81.72 Aligned_cols=33 Identities=24% Similarity=0.359 Sum_probs=31.7
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEecc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (645)
++||+||||||+|+++|..|++.|++|+|+|+.
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~ 40 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGG 40 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCC
Confidence 589999999999999999999999999999986
No 227
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.42 E-value=0.00011 Score=79.26 Aligned_cols=34 Identities=26% Similarity=0.425 Sum_probs=32.2
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEecc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (645)
.++||+|||||++|+++|..|++.|++|+|+|++
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 36 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG 36 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4689999999999999999999999999999986
No 228
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.42 E-value=0.0011 Score=71.50 Aligned_cols=101 Identities=29% Similarity=0.330 Sum_probs=70.3
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~~ 156 (645)
..+|+|||||+.|+.+|..|++.|.+|+++|+.+.... .++..+
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--------------------~~d~~~---------------- 217 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAP--------------------TLDEDV---------------- 217 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST--------------------TSCHHH----------------
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccc--------------------cCCHHH----------------
Confidence 36899999999999999999999999999998642110 000000
Q ss_pred cccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeCCeEEEEEc--CC--cEEe
Q 006440 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLE--NG--QCYA 232 (645)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~--~g--~~i~ 232 (645)
...+.+.|.+..+. .++.+++|++++.+++++.+++. +| +++.
T Consensus 218 --------------------------------~~~l~~~l~~~~gv-~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~ 264 (468)
T 2qae_A 218 --------------------------------TNALVGALAKNEKM-KFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVT 264 (468)
T ss_dssp --------------------------------HHHHHHHHHHHTCC-EEECSCEEEEEEECSSSEEEEEECC---EEEEE
T ss_pred --------------------------------HHHHHHHHhhcCCc-EEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEE
Confidence 01233333122233 47889999999887777777776 66 6799
Q ss_pred ccEEEEccCCchhh
Q 006440 233 GDLLIGADGIWSKV 246 (645)
Q Consensus 233 a~lvVgADG~~S~v 246 (645)
+|.||.|.|..+..
T Consensus 265 ~D~vv~a~G~~p~~ 278 (468)
T 2qae_A 265 CEALLVSVGRRPFT 278 (468)
T ss_dssp ESEEEECSCEEECC
T ss_pred CCEEEECCCcccCC
Confidence 99999999987643
No 229
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.42 E-value=0.00013 Score=80.00 Aligned_cols=36 Identities=17% Similarity=0.236 Sum_probs=33.3
Q ss_pred CCcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
...+||+|||||++|+++|..|++.|++|+|+|+..
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~ 76 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWP 76 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 346899999999999999999999999999999874
No 230
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.41 E-value=0.00085 Score=72.89 Aligned_cols=100 Identities=22% Similarity=0.277 Sum_probs=71.4
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~~ 156 (645)
..+|+|||||+.|+.+|..|++.|.+|+++|+.+.... .++..+.
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~--------------------~~d~~~~--------------- 220 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILR--------------------KFDESVI--------------- 220 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCT--------------------TSCHHHH---------------
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCc--------------------ccchhhH---------------
Confidence 45899999999999999999999999999998642211 0110000
Q ss_pred cccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeCC-eEEEEEcCCcE-Eecc
Q 006440 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGD-KVSVVLENGQC-YAGD 234 (645)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~-~v~v~~~~g~~-i~a~ 234 (645)
..+.+.|.+ .+. .++.+++|++++.+++ .+.|++.+|++ +.+|
T Consensus 221 ---------------------------------~~l~~~l~~-~gv-~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D 265 (500)
T 1onf_A 221 ---------------------------------NVLENDMKK-NNI-NIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFD 265 (500)
T ss_dssp ---------------------------------HHHHHHHHH-TTC-EEECSCCEEEEEESSTTCEEEEETTSCEEEEES
T ss_pred ---------------------------------HHHHHHHHh-CCC-EEEECCEEEEEEEcCCceEEEEECCCcEEEECC
Confidence 012222322 233 4788999999987654 47888899987 9999
Q ss_pred EEEEccCCchhh
Q 006440 235 LLIGADGIWSKV 246 (645)
Q Consensus 235 lvVgADG~~S~v 246 (645)
.||.|.|.....
T Consensus 266 ~vi~a~G~~p~~ 277 (500)
T 1onf_A 266 HVIYCVGRSPDT 277 (500)
T ss_dssp EEEECCCBCCTT
T ss_pred EEEECCCCCcCC
Confidence 999999987544
No 231
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.41 E-value=0.0013 Score=69.51 Aligned_cols=100 Identities=22% Similarity=0.230 Sum_probs=71.4
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~~ 156 (645)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+..... .++..+.
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~-------------------~~~~~~~--------------- 197 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLAR-------------------VAGEALS--------------- 197 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT-------------------TSCHHHH---------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhh-------------------hcCHHHH---------------
Confidence 467999999999999999999999999999986432100 0000000
Q ss_pred cccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeCCeE-EEEEcCCcEEeccE
Q 006440 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKV-SVVLENGQCYAGDL 235 (645)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v-~v~~~~g~~i~a~l 235 (645)
..+.+.+ +..+. .++.+++|++++.+++.+ .|++++|+++.+|+
T Consensus 198 ---------------------------------~~l~~~l-~~~GV-~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~ 242 (415)
T 3lxd_A 198 ---------------------------------EFYQAEH-RAHGV-DLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADI 242 (415)
T ss_dssp ---------------------------------HHHHHHH-HHTTC-EEEETCCEEEEEESSSBEEEEEESSSCEEECSE
T ss_pred ---------------------------------HHHHHHH-HhCCC-EEEECCEEEEEEecCCcEEEEEeCCCCEEEcCE
Confidence 0122222 22233 377899999998876665 68899999999999
Q ss_pred EEEccCCchh
Q 006440 236 LIGADGIWSK 245 (645)
Q Consensus 236 vVgADG~~S~ 245 (645)
||.|-|....
T Consensus 243 Vv~a~G~~p~ 252 (415)
T 3lxd_A 243 VIVGIGIVPC 252 (415)
T ss_dssp EEECSCCEES
T ss_pred EEECCCCccC
Confidence 9999998654
No 232
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.40 E-value=0.0014 Score=69.14 Aligned_cols=100 Identities=26% Similarity=0.388 Sum_probs=71.0
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~~ 156 (645)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+...... ++..+
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~-------------------~~~~~---------------- 186 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARV-------------------VTPEI---------------- 186 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT-------------------SCHHH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhc-------------------cCHHH----------------
Confidence 3579999999999999999999999999999864211000 00000
Q ss_pred cccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeCCeE-EEEEcCCcEEeccE
Q 006440 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKV-SVVLENGQCYAGDL 235 (645)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v-~v~~~~g~~i~a~l 235 (645)
...+.+.+. ..+. .++.+++|++++.+++.+ .|++++|+++.+|+
T Consensus 187 --------------------------------~~~l~~~l~-~~GV-~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~ 232 (404)
T 3fg2_P 187 --------------------------------SSYFHDRHS-GAGI-RMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDL 232 (404)
T ss_dssp --------------------------------HHHHHHHHH-HTTC-EEECSCCEEEEEEETTEEEEEEETTSCEEECSE
T ss_pred --------------------------------HHHHHHHHH-hCCc-EEEECCEEEEEEecCCcEEEEEeCCCCEEEcCE
Confidence 001222222 2233 478899999998877665 48899999999999
Q ss_pred EEEccCCchh
Q 006440 236 LIGADGIWSK 245 (645)
Q Consensus 236 vVgADG~~S~ 245 (645)
||.|.|....
T Consensus 233 Vv~a~G~~p~ 242 (404)
T 3fg2_P 233 VVVGVGVIPN 242 (404)
T ss_dssp EEECCCEEEC
T ss_pred EEECcCCccC
Confidence 9999998643
No 233
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.40 E-value=0.00082 Score=71.00 Aligned_cols=100 Identities=21% Similarity=0.366 Sum_probs=71.5
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~~ 156 (645)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+... +. .++..+
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l-------------~~------~~~~~~---------------- 187 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELL-------------VR------VLGRRI---------------- 187 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------HH------HHCHHH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc-------------hh------hcCHHH----------------
Confidence 4689999999999999999999999999999864211 00 000000
Q ss_pred cccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeCCeEEEEEcCCcEEeccEE
Q 006440 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLL 236 (645)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a~lv 236 (645)
...+.+.|.+ .+. .++.+++|++++.++....|++++|+++.+|+|
T Consensus 188 --------------------------------~~~l~~~l~~-~GV-~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~V 233 (410)
T 3ef6_A 188 --------------------------------GAWLRGLLTE-LGV-QVELGTGVVGFSGEGQLEQVMASDGRSFVADSA 233 (410)
T ss_dssp --------------------------------HHHHHHHHHH-HTC-EEECSCCEEEEECSSSCCEEEETTSCEEECSEE
T ss_pred --------------------------------HHHHHHHHHH-CCC-EEEeCCEEEEEeccCcEEEEEECCCCEEEcCEE
Confidence 0012222222 233 378899999998766555789999999999999
Q ss_pred EEccCCchh
Q 006440 237 IGADGIWSK 245 (645)
Q Consensus 237 VgADG~~S~ 245 (645)
|.|.|..+.
T Consensus 234 v~a~G~~p~ 242 (410)
T 3ef6_A 234 LICVGAEPA 242 (410)
T ss_dssp EECSCEEEC
T ss_pred EEeeCCeec
Confidence 999998754
No 234
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.38 E-value=0.00011 Score=79.14 Aligned_cols=34 Identities=32% Similarity=0.533 Sum_probs=32.2
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEecc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (645)
.++||+|||||++|+++|..|++.|++|+|+|+.
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~ 36 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK 36 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC
Confidence 3589999999999999999999999999999986
No 235
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.37 E-value=0.0012 Score=70.16 Aligned_cols=100 Identities=24% Similarity=0.355 Sum_probs=69.9
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~~ 156 (645)
..+|+|||||+.|+.+|..|++.|.+|+++|+.+..... .++..+.
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~-------------------~~~~~~~--------------- 194 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLER-------------------VTAPPVS--------------- 194 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT-------------------TSCHHHH---------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc-------------------hhhHHHH---------------
Confidence 458999999999999999999999999999986421100 0000000
Q ss_pred cccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEe--eCCeE-EEEEcCCcEEec
Q 006440 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKD--HGDKV-SVVLENGQCYAG 233 (645)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~--~~~~v-~v~~~~g~~i~a 233 (645)
..+.+.|.+ .+. .++.+++|++++. +++.+ .|++.+|+++.+
T Consensus 195 ---------------------------------~~l~~~l~~-~GV-~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~ 239 (431)
T 1q1r_A 195 ---------------------------------AFYEHLHRE-AGV-DIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPA 239 (431)
T ss_dssp ---------------------------------HHHHHHHHH-HTC-EEECSCCEEEEEECTTTCCEEEEEETTSCEEEC
T ss_pred ---------------------------------HHHHHHHHh-CCe-EEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEc
Confidence 012222222 233 3778899999986 44455 688899999999
Q ss_pred cEEEEccCCchh
Q 006440 234 DLLIGADGIWSK 245 (645)
Q Consensus 234 ~lvVgADG~~S~ 245 (645)
|+||.|.|....
T Consensus 240 D~Vv~a~G~~p~ 251 (431)
T 1q1r_A 240 DLVIAGIGLIPN 251 (431)
T ss_dssp SEEEECCCEEEC
T ss_pred CEEEECCCCCcC
Confidence 999999998654
No 236
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.37 E-value=0.0001 Score=79.80 Aligned_cols=34 Identities=38% Similarity=0.531 Sum_probs=32.3
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEecc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (645)
.++||+|||||++|+++|..|++.|++|+|+|++
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~ 43 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAK 43 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC
Confidence 4689999999999999999999999999999986
No 237
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.37 E-value=0.00085 Score=72.90 Aligned_cols=100 Identities=20% Similarity=0.287 Sum_probs=72.9
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~~ 156 (645)
..+|+|||+|+.|+.+|..|++.|.+|+++|+.+.... .++..+
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~--------------------~~d~~~---------------- 225 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLP--------------------YEDADA---------------- 225 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSC--------------------CSSHHH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccc--------------------ccCHHH----------------
Confidence 35899999999999999999999999999998642110 000000
Q ss_pred cccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeCCeEEEEEcCCcEEeccEE
Q 006440 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLL 236 (645)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a~lv 236 (645)
...+.+.|.+ .+. .++.+++|++++.+++++.+++.+|+++.+|.|
T Consensus 226 --------------------------------~~~l~~~l~~-~GV-~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~V 271 (499)
T 1xdi_A 226 --------------------------------ALVLEESFAE-RGV-RLFKNARAASVTRTGAGVLVTMTDGRTVEGSHA 271 (499)
T ss_dssp --------------------------------HHHHHHHHHH-TTC-EEETTCCEEEEEECSSSEEEEETTSCEEEESEE
T ss_pred --------------------------------HHHHHHHHHH-CCC-EEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEE
Confidence 0012222222 233 478899999999877778888888989999999
Q ss_pred EEccCCchhh
Q 006440 237 IGADGIWSKV 246 (645)
Q Consensus 237 VgADG~~S~v 246 (645)
|.|.|..+..
T Consensus 272 v~a~G~~p~~ 281 (499)
T 1xdi_A 272 LMTIGSVPNT 281 (499)
T ss_dssp EECCCEEECC
T ss_pred EECCCCCcCC
Confidence 9999987654
No 238
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.37 E-value=0.0001 Score=79.37 Aligned_cols=34 Identities=32% Similarity=0.502 Sum_probs=32.3
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
++||+||||||+|+++|..|++.|++|+|+|+..
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 6899999999999999999999999999999864
No 239
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.36 E-value=9.3e-05 Score=77.08 Aligned_cols=33 Identities=33% Similarity=0.411 Sum_probs=31.4
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
+||+|||||++|+++|..|+++|++|+|+|++.
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~ 34 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRN 34 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCC
Confidence 689999999999999999999999999999874
No 240
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.36 E-value=0.00095 Score=72.95 Aligned_cols=99 Identities=16% Similarity=0.212 Sum_probs=71.8
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhcccccccccc
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRING 157 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~~~ 157 (645)
.+|+|||||..|+.+|..|++.|.+|+++|+.+.... .++..+
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~--------------------~~~~~~----------------- 257 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKL--------------------IKDNET----------------- 257 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT--------------------CCSHHH-----------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCcccc--------------------cccHHH-----------------
Confidence 6899999999999999999999999999998642110 000000
Q ss_pred ccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeCCe----EEEEEcCCc-EEe
Q 006440 158 LVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDK----VSVVLENGQ-CYA 232 (645)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~----v~v~~~~g~-~i~ 232 (645)
...+.+.|.+ .+. .++.+++|++++.++++ +.|++.+|+ ++.
T Consensus 258 -------------------------------~~~l~~~l~~-~GV-~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~ 304 (523)
T 1mo9_A 258 -------------------------------RAYVLDRMKE-QGM-EIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIE 304 (523)
T ss_dssp -------------------------------HHHHHHHHHH-TTC-EEESSCEEEEEEECTTSBEEEEEEEETTEEEEEE
T ss_pred -------------------------------HHHHHHHHHh-CCc-EEEECCEEEEEEEcCCCceEEEEEEECCCcEEEE
Confidence 0122333322 233 47889999999876555 778888887 899
Q ss_pred ccEEEEccCCchhh
Q 006440 233 GDLLIGADGIWSKV 246 (645)
Q Consensus 233 a~lvVgADG~~S~v 246 (645)
+|.||.|.|..+..
T Consensus 305 aD~Vv~A~G~~p~~ 318 (523)
T 1mo9_A 305 TDFVFLGLGEQPRS 318 (523)
T ss_dssp CSCEEECCCCEECC
T ss_pred cCEEEECcCCccCC
Confidence 99999999987654
No 241
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.36 E-value=0.00012 Score=78.96 Aligned_cols=34 Identities=32% Similarity=0.533 Sum_probs=32.1
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
++||+|||||++|+++|+.|++.|++|+|+|+.+
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~ 35 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRG 35 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 4799999999999999999999999999999874
No 242
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.36 E-value=0.0015 Score=70.75 Aligned_cols=98 Identities=21% Similarity=0.237 Sum_probs=71.5
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~~ 156 (645)
..+|+|||||+.|+.+|..|++.|.+|+++++.+.... .++..+
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~--------------------~~d~~~---------------- 217 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVAN--------------------LQDEEM---------------- 217 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTT--------------------CCCHHH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc--------------------cCCHHH----------------
Confidence 46899999999999999999999999999998642110 000000
Q ss_pred cccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeCCeEEEEEc--CC--cEEe
Q 006440 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLE--NG--QCYA 232 (645)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~--~g--~~i~ 232 (645)
...+.+.|.+. ..++.++++++++.+++++.+++. +| +++.
T Consensus 218 --------------------------------~~~l~~~l~~~---V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~ 262 (492)
T 3ic9_A 218 --------------------------------KRYAEKTFNEE---FYFDAKARVISTIEKEDAVEVIYFDKSGQKTTES 262 (492)
T ss_dssp --------------------------------HHHHHHHHHTT---SEEETTCEEEEEEECSSSEEEEEECTTCCEEEEE
T ss_pred --------------------------------HHHHHHHHhhC---cEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEE
Confidence 01233333322 347889999999988888888885 67 6799
Q ss_pred ccEEEEccCCchh
Q 006440 233 GDLLIGADGIWSK 245 (645)
Q Consensus 233 a~lvVgADG~~S~ 245 (645)
+|.||.|.|....
T Consensus 263 ~D~Vi~a~G~~p~ 275 (492)
T 3ic9_A 263 FQYVLAATGRKAN 275 (492)
T ss_dssp ESEEEECSCCEES
T ss_pred CCEEEEeeCCccC
Confidence 9999999998643
No 243
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.34 E-value=0.00011 Score=78.89 Aligned_cols=34 Identities=26% Similarity=0.398 Sum_probs=32.2
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEecc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (645)
.++||+|||||++|+++|..|++.|++|+|+|+.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~ 36 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAK 36 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC
Confidence 3589999999999999999999999999999986
No 244
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.33 E-value=0.00013 Score=81.44 Aligned_cols=36 Identities=22% Similarity=0.391 Sum_probs=32.9
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (645)
..+||+|||||++|+++|+.|+++|++|+|+|+...
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~ 80 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEI 80 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCC
Confidence 468999999999999999999999999999999753
No 245
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.33 E-value=0.00015 Score=78.91 Aligned_cols=52 Identities=21% Similarity=0.279 Sum_probs=41.9
Q ss_pred HHHHHHHHHcCCceEEcCceEEEEEeeCCeEEEEEcCCc----EEeccEEEEccCCc
Q 006440 191 TLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQ----CYAGDLLIGADGIW 243 (645)
Q Consensus 191 ~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~----~i~a~lvVgADG~~ 243 (645)
.|.+.|.+.++. .++++++|++|+.+++++.|++.+|+ +++||.||.|-+..
T Consensus 242 ~l~~~l~~~l~~-~i~~~~~V~~I~~~~~~v~v~~~~~~~~~~~~~ad~vI~t~p~~ 297 (498)
T 2iid_A 242 KLPTAMYRDIQD-KVHFNAQVIKIQQNDQKVTVVYETLSKETPSVTADYVIVCTTSR 297 (498)
T ss_dssp HHHHHHHHHTGG-GEESSCEEEEEEECSSCEEEEEECSSSCCCEEEESEEEECSCHH
T ss_pred HHHHHHHHhccc-ccccCCEEEEEEECCCeEEEEEecCCcccceEEeCEEEECCChH
Confidence 455566666554 48899999999998889999988775 58999999999875
No 246
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.32 E-value=0.00016 Score=78.28 Aligned_cols=57 Identities=16% Similarity=0.186 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHcCCceEEcC--ceEEEEEeeCCeEEEEEcCCcEEeccEEEEccCCchhhh
Q 006440 189 RMTLQQILAKAVGDEIILNE--SNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSKVR 247 (645)
Q Consensus 189 r~~l~~~L~~~~~~~~i~~~--~~v~~i~~~~~~v~v~~~~g~~i~a~lvVgADG~~S~vR 247 (645)
-..|.+.|.+.++...++.+ ++|++|+.++++| ++.+|++++||.||.|-......+
T Consensus 215 ~~~l~~~la~~l~~~~i~~~~~~~V~~I~~~~~~v--~~~~G~~~~ad~VI~a~p~~~~~~ 273 (484)
T 4dsg_A 215 TGIIYQAIKEKLPSEKLTFNSGFQAIAIDADAKTI--TFSNGEVVSYDYLISTVPFDNLLR 273 (484)
T ss_dssp THHHHHHHHHHSCGGGEEECGGGCEEEEETTTTEE--EETTSCEEECSEEEECSCHHHHHH
T ss_pred HHHHHHHHHhhhhhCeEEECCCceeEEEEecCCEE--EECCCCEEECCEEEECCCHHHHHH
Confidence 45677778887765357888 4699999887765 458888999999999987765543
No 247
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.31 E-value=0.0012 Score=71.07 Aligned_cols=99 Identities=27% Similarity=0.402 Sum_probs=70.0
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~~ 156 (645)
..+|+|||||+.|+.+|..|++.|.+|+++|+.+.... .++..+.
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--------------------~~~~~~~--------------- 215 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALP--------------------NEDADVS--------------- 215 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST--------------------TSCHHHH---------------
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcccc--------------------ccCHHHH---------------
Confidence 35899999999999999999999999999998642110 0100000
Q ss_pred cccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeCCeEEEEEc-CC--cEEec
Q 006440 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLE-NG--QCYAG 233 (645)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~-~g--~~i~a 233 (645)
..+.+.|.+ .+. .++.+++|++++.+++.+.+++. +| +++.+
T Consensus 216 ---------------------------------~~l~~~l~~-~gv-~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~ 260 (464)
T 2a8x_A 216 ---------------------------------KEIEKQFKK-LGV-TILTATKVESIADGGSQVTVTVTKDGVAQELKA 260 (464)
T ss_dssp ---------------------------------HHHHHHHHH-HTC-EEECSCEEEEEEECSSCEEEEEESSSCEEEEEE
T ss_pred ---------------------------------HHHHHHHHH-cCC-EEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEc
Confidence 012222222 233 37889999999887767777775 66 67999
Q ss_pred cEEEEccCCchh
Q 006440 234 DLLIGADGIWSK 245 (645)
Q Consensus 234 ~lvVgADG~~S~ 245 (645)
|.||.|.|....
T Consensus 261 D~vv~a~G~~p~ 272 (464)
T 2a8x_A 261 EKVLQAIGFAPN 272 (464)
T ss_dssp SEEEECSCEEEC
T ss_pred CEEEECCCCCcc
Confidence 999999997643
No 248
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.31 E-value=0.00015 Score=78.83 Aligned_cols=34 Identities=35% Similarity=0.529 Sum_probs=32.0
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
++||+|||||++|+++|..|++.|++|+|+|+..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4799999999999999999999999999999873
No 249
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.31 E-value=0.0012 Score=71.04 Aligned_cols=100 Identities=22% Similarity=0.339 Sum_probs=72.3
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHC-CCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhcccccccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRK-GFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~-g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~ 155 (645)
..+|+|||+|+.|+.+|..|++. |.+|+++++.+..... .++..+
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~-------------------~~~~~~--------------- 204 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPG-------------------FTSKSL--------------- 204 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTT-------------------TSCHHH---------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCccccc-------------------ccCHHH---------------
Confidence 46899999999999999999999 9999999986421100 000000
Q ss_pred ccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeCCeEEEEEcCCcEEeccE
Q 006440 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDL 235 (645)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a~l 235 (645)
...+.+.|.+ .+ ..++.+++|++++.+++.+.+.+.+|+++.+|.
T Consensus 205 ---------------------------------~~~l~~~l~~-~G-V~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~ 249 (472)
T 3iwa_A 205 ---------------------------------SQMLRHDLEK-ND-VVVHTGEKVVRLEGENGKVARVITDKRTLDADL 249 (472)
T ss_dssp ---------------------------------HHHHHHHHHH-TT-CEEECSCCEEEEEESSSBEEEEEESSCEEECSE
T ss_pred ---------------------------------HHHHHHHHHh-cC-CEEEeCCEEEEEEccCCeEEEEEeCCCEEEcCE
Confidence 0112222222 23 347889999999887778888899999999999
Q ss_pred EEEccCCchh
Q 006440 236 LIGADGIWSK 245 (645)
Q Consensus 236 vVgADG~~S~ 245 (645)
||.|.|....
T Consensus 250 Vv~a~G~~p~ 259 (472)
T 3iwa_A 250 VILAAGVSPN 259 (472)
T ss_dssp EEECSCEEEC
T ss_pred EEECCCCCcC
Confidence 9999998654
No 250
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.30 E-value=0.0002 Score=76.45 Aligned_cols=54 Identities=22% Similarity=0.149 Sum_probs=41.0
Q ss_pred HHHHHHHHHc---CCceEEcCceEEEEEeeCCeEEEEEcCCcEEeccEEEEccCCchh
Q 006440 191 TLQQILAKAV---GDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK 245 (645)
Q Consensus 191 ~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a~lvVgADG~~S~ 245 (645)
.|.+.|.+.+ +.. ++.+++|++|..+++++.....+|++++||.||.|.|.++.
T Consensus 235 ~l~~~l~~~~~~~G~~-i~~~~~V~~I~~~~~~v~~v~~~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 235 ELPQGFARLSAIYGGT-YMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp HHHHHHHHHHHHHTCC-CBCSCCCCEEEEETTEEEEEEETTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHcCCE-EECCCEEEEEEEeCCEEEEEEECCeEEECCEEEECCCCCcc
Confidence 4555555433 433 78899999999888887644468889999999999999874
No 251
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.30 E-value=0.00016 Score=77.47 Aligned_cols=37 Identities=14% Similarity=0.389 Sum_probs=33.9
Q ss_pred CCCcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 74 ENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 74 ~~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
++..+||+|||+|++|+++|..|+++|++|+++|+++
T Consensus 17 ~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~ 53 (475)
T 3p1w_A 17 QGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNP 53 (475)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccC
Confidence 3456899999999999999999999999999999975
No 252
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.29 E-value=0.0011 Score=72.04 Aligned_cols=100 Identities=22% Similarity=0.261 Sum_probs=71.6
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHC---CCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhcccccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRK---GFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGD 153 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~---g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~ 153 (645)
..+|+|||||..|+.+|..|++. |.+|+++++.+.... .++..+.
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~--------------------~~d~~~~------------ 238 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILR--------------------GFDETIR------------ 238 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCT--------------------TSCHHHH------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCcccc--------------------ccCHHHH------------
Confidence 35899999999999999999999 999999998642110 0110000
Q ss_pred ccccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeCC-eEEEEEcCCcEEe
Q 006440 154 RINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGD-KVSVVLENGQCYA 232 (645)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~-~v~v~~~~g~~i~ 232 (645)
..+.+.|.+ .+. .++.+++|++++.+++ .+.|++.+|+++.
T Consensus 239 ------------------------------------~~l~~~l~~-~GV-~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~ 280 (495)
T 2wpf_A 239 ------------------------------------EEVTKQLTA-NGI-EIMTNENPAKVSLNTDGSKHVTFESGKTLD 280 (495)
T ss_dssp ------------------------------------HHHHHHHHH-TTC-EEEESCCEEEEEECTTSCEEEEETTSCEEE
T ss_pred ------------------------------------HHHHHHHHh-CCC-EEEeCCEEEEEEEcCCceEEEEECCCcEEE
Confidence 122233322 233 4788999999987654 4788899998999
Q ss_pred ccEEEEccCCchhh
Q 006440 233 GDLLIGADGIWSKV 246 (645)
Q Consensus 233 a~lvVgADG~~S~v 246 (645)
+|.||.|.|....+
T Consensus 281 ~D~vv~a~G~~p~~ 294 (495)
T 2wpf_A 281 VDVVMMAIGRIPRT 294 (495)
T ss_dssp ESEEEECSCEEECC
T ss_pred cCEEEECCCCcccc
Confidence 99999999986543
No 253
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.26 E-value=0.00017 Score=77.44 Aligned_cols=33 Identities=42% Similarity=0.612 Sum_probs=31.5
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
+||+||||||+|+++|..|++.|++|+|+|+.+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~ 34 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEK 34 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCC
Confidence 699999999999999999999999999999874
No 254
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.26 E-value=0.0011 Score=71.95 Aligned_cols=99 Identities=24% Similarity=0.243 Sum_probs=71.1
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHC---CCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhcccccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRK---GFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGD 153 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~---g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~ 153 (645)
..+|+|||||+.|+.+|..|++. |.+|+++|+.+.... .++..+
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~--------------------~~d~~~------------- 233 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILR--------------------GFDSEL------------- 233 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSST--------------------TSCHHH-------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCccc--------------------ccCHHH-------------
Confidence 35899999999999999999999 999999998642110 010000
Q ss_pred ccccccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeCC-eEEEEEcCCcEEe
Q 006440 154 RINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGD-KVSVVLENGQCYA 232 (645)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~-~v~v~~~~g~~i~ 232 (645)
...+.+.|.+ .+ ..++.+++|++++.+++ .+.|++.+|+++.
T Consensus 234 -----------------------------------~~~l~~~l~~-~G-V~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~ 276 (490)
T 1fec_A 234 -----------------------------------RKQLTEQLRA-NG-INVRTHENPAKVTKNADGTRHVVFESGAEAD 276 (490)
T ss_dssp -----------------------------------HHHHHHHHHH-TT-EEEEETCCEEEEEECTTSCEEEEETTSCEEE
T ss_pred -----------------------------------HHHHHHHHHh-CC-CEEEeCCEEEEEEEcCCCEEEEEECCCcEEE
Confidence 0112233322 12 34788999999987654 4788899998999
Q ss_pred ccEEEEccCCchh
Q 006440 233 GDLLIGADGIWSK 245 (645)
Q Consensus 233 a~lvVgADG~~S~ 245 (645)
+|.||.|.|....
T Consensus 277 ~D~vv~a~G~~p~ 289 (490)
T 1fec_A 277 YDVVMLAIGRVPR 289 (490)
T ss_dssp ESEEEECSCEEES
T ss_pred cCEEEEccCCCcC
Confidence 9999999998654
No 255
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.25 E-value=0.0014 Score=70.74 Aligned_cols=101 Identities=21% Similarity=0.241 Sum_probs=70.1
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~~ 156 (645)
..+|+|||||+.|+.+|..|++.|.+|+++|+.+..... .++..+
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-------------------~~~~~~---------------- 222 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGV-------------------GIDMEI---------------- 222 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCS-------------------SCCHHH----------------
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCc-------------------ccCHHH----------------
Confidence 358999999999999999999999999999986421100 000000
Q ss_pred cccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeCCe-EEEEE-----cCCcE
Q 006440 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDK-VSVVL-----ENGQC 230 (645)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~-v~v~~-----~~g~~ 230 (645)
...+.+.|.+ .+ ..++.+++|++++.++++ +.+++ .++++
T Consensus 223 --------------------------------~~~l~~~l~~-~G-v~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~ 268 (474)
T 1zmd_A 223 --------------------------------SKNFQRILQK-QG-FKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEV 268 (474)
T ss_dssp --------------------------------HHHHHHHHHH-TT-CEEECSEEEEEEEECTTSCEEEEEEETTSCCCEE
T ss_pred --------------------------------HHHHHHHHHH-CC-CEEEeCceEEEEEEcCCceEEEEEEecCCCCceE
Confidence 0112233322 23 347889999999887766 77764 45678
Q ss_pred EeccEEEEccCCchhh
Q 006440 231 YAGDLLIGADGIWSKV 246 (645)
Q Consensus 231 i~a~lvVgADG~~S~v 246 (645)
+.+|.||.|.|.....
T Consensus 269 i~~D~vv~a~G~~p~~ 284 (474)
T 1zmd_A 269 ITCDVLLVCIGRRPFT 284 (474)
T ss_dssp EEESEEEECSCEEECC
T ss_pred EEcCEEEECcCCCcCC
Confidence 9999999999987543
No 256
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.25 E-value=0.0017 Score=71.62 Aligned_cols=33 Identities=24% Similarity=0.313 Sum_probs=31.1
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
.+|+|||||+.|+.+|..|++.|.+|+++++.+
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 184 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHLGIKTTLLELAD 184 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCC
Confidence 489999999999999999999999999999864
No 257
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.24 E-value=0.0023 Score=67.49 Aligned_cols=96 Identities=25% Similarity=0.344 Sum_probs=67.4
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~~ 156 (645)
..+|+|||||+.|+.+|..|++.|.+|+++|+.+..... .++..+.
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-------------------~~~~~~~--------------- 190 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSR-------------------AAPATLA--------------- 190 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-------------------TSCHHHH---------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc-------------------ccCHHHH---------------
Confidence 468999999999999999999999999999986421100 0000000
Q ss_pred cccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeCCeEEEEEcCCcEEeccEE
Q 006440 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLL 236 (645)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a~lv 236 (645)
..+.+.|.+ .+. .++.+++|++++ + + .|++.+|+++.+|.|
T Consensus 191 ---------------------------------~~l~~~l~~-~GV-~i~~~~~v~~i~-~-~--~v~~~~g~~i~~D~v 231 (408)
T 2gqw_A 191 ---------------------------------DFVARYHAA-QGV-DLRFERSVTGSV-D-G--VVLLDDGTRIAADMV 231 (408)
T ss_dssp ---------------------------------HHHHHHHHH-TTC-EEEESCCEEEEE-T-T--EEEETTSCEEECSEE
T ss_pred ---------------------------------HHHHHHHHH-cCc-EEEeCCEEEEEE-C-C--EEEECCCCEEEcCEE
Confidence 112222222 233 377889999998 3 3 677889999999999
Q ss_pred EEccCCchh
Q 006440 237 IGADGIWSK 245 (645)
Q Consensus 237 VgADG~~S~ 245 (645)
|.|.|....
T Consensus 232 i~a~G~~p~ 240 (408)
T 2gqw_A 232 VVGIGVLAN 240 (408)
T ss_dssp EECSCEEEC
T ss_pred EECcCCCcc
Confidence 999998643
No 258
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.23 E-value=0.00095 Score=71.87 Aligned_cols=99 Identities=25% Similarity=0.357 Sum_probs=69.7
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~~ 156 (645)
..+|+|||||+.|+.+|..|++.|.+|+++|+.+.... .++..+
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~--------------------~~~~~~---------------- 220 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVP--------------------TMDAEI---------------- 220 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSST--------------------TSCHHH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc--------------------cccHHH----------------
Confidence 46899999999999999999999999999998742110 000000
Q ss_pred cccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeCCeEEEEEc---CC--cEE
Q 006440 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLE---NG--QCY 231 (645)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~---~g--~~i 231 (645)
...+.+.|.+ .+.. ++.+++|++++.+++++.+++. +| +++
T Consensus 221 --------------------------------~~~l~~~l~~-~gv~-i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~ 266 (470)
T 1dxl_A 221 --------------------------------RKQFQRSLEK-QGMK-FKLKTKVVGVDTSGDGVKLTVEPSAGGEQTII 266 (470)
T ss_dssp --------------------------------HHHHHHHHHH-SSCC-EECSEEEEEEECSSSSEEEEEEESSSCCCEEE
T ss_pred --------------------------------HHHHHHHHHH-cCCE-EEeCCEEEEEEEcCCeEEEEEEecCCCcceEE
Confidence 0112222322 2333 7789999999877666777765 45 679
Q ss_pred eccEEEEccCCchh
Q 006440 232 AGDLLIGADGIWSK 245 (645)
Q Consensus 232 ~a~lvVgADG~~S~ 245 (645)
.+|.||.|.|....
T Consensus 267 ~~D~vv~a~G~~p~ 280 (470)
T 1dxl_A 267 EADVVLVSAGRTPF 280 (470)
T ss_dssp EESEEECCCCEEEC
T ss_pred ECCEEEECCCCCcC
Confidence 99999999998754
No 259
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.22 E-value=0.00086 Score=71.99 Aligned_cols=97 Identities=22% Similarity=0.301 Sum_probs=66.8
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~~ 156 (645)
..+|+|||||++|+.+|..|++.|.+|+|+|+.+.... .++..+.
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~--------------------~~~~~~~--------------- 215 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILP--------------------TYDSELT--------------- 215 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSST--------------------TSCHHHH---------------
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcccc--------------------ccCHHHH---------------
Confidence 35899999999999999999999999999998742210 0000000
Q ss_pred cccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeCCeEEEEEcCC--cEEecc
Q 006440 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENG--QCYAGD 234 (645)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g--~~i~a~ 234 (645)
..+.+.|.+ .+. .++.+++|++++. + .+.++..+| +++.+|
T Consensus 216 ---------------------------------~~l~~~l~~-~gv-~i~~~~~v~~i~~-~-~v~v~~~~G~~~~i~~D 258 (458)
T 1lvl_A 216 ---------------------------------APVAESLKK-LGI-ALHLGHSVEGYEN-G-CLLANDGKGGQLRLEAD 258 (458)
T ss_dssp ---------------------------------HHHHHHHHH-HTC-EEETTCEEEEEET-T-EEEEECSSSCCCEECCS
T ss_pred ---------------------------------HHHHHHHHH-CCC-EEEECCEEEEEEe-C-CEEEEECCCceEEEECC
Confidence 012223322 233 3788999999986 3 366654456 689999
Q ss_pred EEEEccCCchh
Q 006440 235 LLIGADGIWSK 245 (645)
Q Consensus 235 lvVgADG~~S~ 245 (645)
.||.|.|....
T Consensus 259 ~vv~a~G~~p~ 269 (458)
T 1lvl_A 259 RVLVAVGRRPR 269 (458)
T ss_dssp CEEECCCEEEC
T ss_pred EEEECcCCCcC
Confidence 99999998654
No 260
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.20 E-value=0.00019 Score=77.20 Aligned_cols=34 Identities=32% Similarity=0.569 Sum_probs=32.0
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEecc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (645)
.++||+||||||+|+++|..|++.|++|+|+|+.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 37 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ 37 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEccC
Confidence 4589999999999999999999999999999984
No 261
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.18 E-value=0.0023 Score=69.89 Aligned_cols=100 Identities=18% Similarity=0.198 Sum_probs=74.1
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~~ 156 (645)
+.+++|||||..|+.+|..+++.|.+|+|+++.. ..+ ..+..+.
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~-~L~--------------------~~D~ei~--------------- 266 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSLGYDVTVAVRSI-VLR--------------------GFDQQCA--------------- 266 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSC-SST--------------------TSCHHHH---------------
T ss_pred CceEEEECCCHHHHHHHHHHHhcCCeEEEecccc-ccc--------------------ccchhHH---------------
Confidence 4579999999999999999999999999998642 110 0110111
Q ss_pred cccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeCCeEEEEEcCCcEEeccEE
Q 006440 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLL 236 (645)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a~lv 236 (645)
..+.+.|.+ .+ ..++.+..+..++..++.+.|.+.++.++.+|.|
T Consensus 267 ---------------------------------~~l~~~l~~-~g-i~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~v 311 (542)
T 4b1b_A 267 ---------------------------------VKVKLYMEE-QG-VMFKNGILPKKLTKMDDKILVEFSDKTSELYDTV 311 (542)
T ss_dssp ---------------------------------HHHHHHHHH-TT-CEEEETCCEEEEEEETTEEEEEETTSCEEEESEE
T ss_pred ---------------------------------HHHHHHHHh-hc-ceeecceEEEEEEecCCeEEEEEcCCCeEEEEEE
Confidence 012233322 12 2477889999999999999999999999999999
Q ss_pred EEccCCchhhh
Q 006440 237 IGADGIWSKVR 247 (645)
Q Consensus 237 VgADG~~S~vR 247 (645)
+.|-|+...+-
T Consensus 312 LvAvGR~Pnt~ 322 (542)
T 4b1b_A 312 LYAIGRKGDID 322 (542)
T ss_dssp EECSCEEESCG
T ss_pred EEcccccCCcc
Confidence 99999876654
No 262
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.17 E-value=0.00021 Score=77.55 Aligned_cols=33 Identities=33% Similarity=0.468 Sum_probs=31.1
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHH-CCCeEEEEec
Q 006440 76 KKLRILVAGGGIGGLVFALAAKR-KGFEVLVFEK 108 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~-~g~~~~~~~~ 108 (645)
.++||+||||||+|+++|+.|++ .|++|+|+|+
T Consensus 6 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 39 (495)
T 2wpf_A 6 KAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDV 39 (495)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred cccCEEEECCChhHHHHHHHHHHhcCCeEEEEec
Confidence 36899999999999999999999 9999999994
No 263
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.14 E-value=0.0031 Score=68.26 Aligned_cols=99 Identities=27% Similarity=0.327 Sum_probs=70.3
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~~ 156 (645)
..+|+|||||+.|+.+|..|++.|.+|+++++.+.... .++..+.
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--------------------~~d~~~~--------------- 242 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILG--------------------GMDGEVA--------------- 242 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSS--------------------SSCHHHH---------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccc--------------------cCCHHHH---------------
Confidence 45899999999999999999999999999998642111 0000000
Q ss_pred cccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeCCeEEEEEcC---C--cEE
Q 006440 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLEN---G--QCY 231 (645)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~---g--~~i 231 (645)
..+.+.|.+ .+ ..++.+++|++++.+++.+.+++.+ | +++
T Consensus 243 ---------------------------------~~l~~~l~~-~g-V~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i 287 (491)
T 3urh_A 243 ---------------------------------KQLQRMLTK-QG-IDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTL 287 (491)
T ss_dssp ---------------------------------HHHHHHHHH-TT-CEEECSEEEEEEEEETTEEEEEEEETTSCCCEEE
T ss_pred ---------------------------------HHHHHHHHh-CC-CEEEECCeEEEEEEeCCEEEEEEEecCCCceEEE
Confidence 112222222 12 3477889999999888888887763 4 579
Q ss_pred eccEEEEccCCchh
Q 006440 232 AGDLLIGADGIWSK 245 (645)
Q Consensus 232 ~a~lvVgADG~~S~ 245 (645)
.+|.||.|.|....
T Consensus 288 ~~D~Vi~a~G~~p~ 301 (491)
T 3urh_A 288 DAEVVLIATGRKPS 301 (491)
T ss_dssp EESEEEECCCCEEC
T ss_pred EcCEEEEeeCCccC
Confidence 99999999998643
No 264
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.13 E-value=0.0022 Score=69.01 Aligned_cols=98 Identities=19% Similarity=0.182 Sum_probs=70.6
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~~ 156 (645)
..+|+|||||+.|+.+|..|++.|.+|+++++.+...... ++.
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~-------------------~d~------------------ 214 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITL-------------------EDQ------------------ 214 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTS-------------------CCH------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCCC-------------------CCH------------------
Confidence 3589999999999999999999999999999864211000 000
Q ss_pred cccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeC-CeEEEEEc--CCc--EE
Q 006440 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHG-DKVSVVLE--NGQ--CY 231 (645)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~-~~v~v~~~--~g~--~i 231 (645)
.+.+.|.+.+. ..++.+++|++++.++ +++.++++ +|+ ++
T Consensus 215 ----------------------------------~~~~~l~~~l~-v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~i 259 (466)
T 3l8k_A 215 ----------------------------------DIVNTLLSILK-LNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSI 259 (466)
T ss_dssp ----------------------------------HHHHHHHHHHC-CCEECSCCEEEEEEEETTEEEEEECCTTSCCEEE
T ss_pred ----------------------------------HHHHHHHhcCE-EEEEECCEEEEEEEcCCCcEEEEEEecCCceEEE
Confidence 11122222222 3377889999998877 78888887 675 79
Q ss_pred eccEEEEccCCchhh
Q 006440 232 AGDLLIGADGIWSKV 246 (645)
Q Consensus 232 ~a~lvVgADG~~S~v 246 (645)
.+|.||.|-|.....
T Consensus 260 ~~D~vi~a~G~~p~~ 274 (466)
T 3l8k_A 260 FTNSVVLAAGRRPVI 274 (466)
T ss_dssp EESCEEECCCEEECC
T ss_pred EcCEEEECcCCCccc
Confidence 999999999986543
No 265
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.13 E-value=0.00027 Score=76.69 Aligned_cols=32 Identities=28% Similarity=0.381 Sum_probs=30.6
Q ss_pred cCcEEEEcCCHHHHHHHHHHHH-CCCeEEEEec
Q 006440 77 KLRILVAGGGIGGLVFALAAKR-KGFEVLVFEK 108 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~-~g~~~~~~~~ 108 (645)
++||+||||||+|+++|+.|++ .|++|+|+|+
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 35 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDL 35 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 5899999999999999999999 9999999994
No 266
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.10 E-value=0.0034 Score=67.16 Aligned_cols=101 Identities=18% Similarity=0.205 Sum_probs=69.2
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~~ 156 (645)
..+|+|||||..|+.+|..|++.|.+|+++|+.+..... .++..+.
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-------------------~~~~~~~--------------- 194 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYK-------------------YFDKEFT--------------- 194 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTT-------------------TSCHHHH---------------
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhh-------------------hhhhhHH---------------
Confidence 458999999999999999999999999999986421100 0000000
Q ss_pred cccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeCCeEEEEEcCCcEEeccEE
Q 006440 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLL 236 (645)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a~lv 236 (645)
..+.+.|.+ .+. .++.+++|++++.+++.+.....+|+++.+|.|
T Consensus 195 ---------------------------------~~l~~~l~~-~Gv-~i~~~~~v~~i~~~~~~v~~v~~~g~~i~~D~v 239 (452)
T 2cdu_A 195 ---------------------------------DILAKDYEA-HGV-NLVLGSKVAAFEEVDDEIITKTLDGKEIKSDIA 239 (452)
T ss_dssp ---------------------------------HHHHHHHHH-TTC-EEEESSCEEEEEEETTEEEEEETTSCEEEESEE
T ss_pred ---------------------------------HHHHHHHHH-CCC-EEEcCCeeEEEEcCCCeEEEEEeCCCEEECCEE
Confidence 112222222 233 478899999998766666533347889999999
Q ss_pred EEccCCchhh
Q 006440 237 IGADGIWSKV 246 (645)
Q Consensus 237 VgADG~~S~v 246 (645)
|.|.|.....
T Consensus 240 v~a~G~~p~~ 249 (452)
T 2cdu_A 240 ILCIGFRPNT 249 (452)
T ss_dssp EECCCEEECC
T ss_pred EECcCCCCCH
Confidence 9999986543
No 267
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.09 E-value=0.00032 Score=77.20 Aligned_cols=35 Identities=26% Similarity=0.455 Sum_probs=33.0
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
..+|++|||+|++|+++|..|++.|++|+|+|+..
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~ 40 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGG 40 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 46899999999999999999999999999999975
No 268
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.09 E-value=0.0031 Score=67.42 Aligned_cols=98 Identities=18% Similarity=0.125 Sum_probs=69.3
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~~ 156 (645)
..+|+|||+|..|+.+|..|++.|.+|+++++.+..... .++..+.
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-------------------~~d~~~~--------------- 192 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPK-------------------YFDKEMV--------------- 192 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-------------------TCCHHHH---------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccc-------------------cCCHHHH---------------
Confidence 357999999999999999999999999999986421100 0000000
Q ss_pred cccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeCCeEEEEEcCCcEEeccEE
Q 006440 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLL 236 (645)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a~lv 236 (645)
..+.+.|.+ .+ ..++.+++|++++.+++++.|+++++ ++.+|.|
T Consensus 193 ---------------------------------~~l~~~l~~-~G-V~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~V 236 (452)
T 3oc4_A 193 ---------------------------------AEVQKSLEK-QA-VIFHFEETVLGIEETANGIVLETSEQ-EISCDSG 236 (452)
T ss_dssp ---------------------------------HHHHHHHHT-TT-EEEEETCCEEEEEECSSCEEEEESSC-EEEESEE
T ss_pred ---------------------------------HHHHHHHHH-cC-CEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEE
Confidence 012222221 12 24778999999987777788888777 8999999
Q ss_pred EEccCCch
Q 006440 237 IGADGIWS 244 (645)
Q Consensus 237 VgADG~~S 244 (645)
|.|.|...
T Consensus 237 v~A~G~~p 244 (452)
T 3oc4_A 237 IFALNLHP 244 (452)
T ss_dssp EECSCCBC
T ss_pred EECcCCCC
Confidence 99999854
No 269
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.09 E-value=0.0033 Score=67.59 Aligned_cols=98 Identities=18% Similarity=0.191 Sum_probs=70.0
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~~ 156 (645)
..+|+|||||+.|+.+|..|++.|.+|+++++.+.... ++..+.
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~---------------------~~~~~~--------------- 219 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR---------------------EDPAIG--------------- 219 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT---------------------SCHHHH---------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC---------------------CCHHHH---------------
Confidence 45899999999999999999999999999998642110 000000
Q ss_pred cccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeCCeEEEEEcCCcEEeccEE
Q 006440 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLL 236 (645)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a~lv 236 (645)
..+.+.|.+ .+ ..++.+++|++++.+++.+.|+++ +.++.+|.|
T Consensus 220 ---------------------------------~~l~~~l~~-~G-v~i~~~~~v~~i~~~~~~~~v~~~-~~~i~aD~V 263 (467)
T 1zk7_A 220 ---------------------------------EAVTAAFRA-EG-IEVLEHTQASQVAHMDGEFVLTTT-HGELRADKL 263 (467)
T ss_dssp ---------------------------------HHHHHHHHH-TT-CEEETTCCEEEEEEETTEEEEEET-TEEEEESEE
T ss_pred ---------------------------------HHHHHHHHh-CC-CEEEcCCEEEEEEEeCCEEEEEEC-CcEEEcCEE
Confidence 012222222 23 347888999999887777777776 457999999
Q ss_pred EEccCCchhh
Q 006440 237 IGADGIWSKV 246 (645)
Q Consensus 237 VgADG~~S~v 246 (645)
|.|.|..+..
T Consensus 264 v~a~G~~p~~ 273 (467)
T 1zk7_A 264 LVATGRTPNT 273 (467)
T ss_dssp EECSCEEESC
T ss_pred EECCCCCcCC
Confidence 9999997654
No 270
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.06 E-value=0.00035 Score=77.83 Aligned_cols=34 Identities=29% Similarity=0.469 Sum_probs=31.9
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEecc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (645)
..+||+||||||+|+++|..|++.|++|+|+|+.
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 4589999999999999999999999999999974
No 271
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.04 E-value=0.0036 Score=67.56 Aligned_cols=35 Identities=29% Similarity=0.340 Sum_probs=32.0
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
...+|+|||||++|+.+|..|++.|.+|+++|+.+
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 219 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERND 219 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGG
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCC
Confidence 34689999999999999999999999999999864
No 272
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.04 E-value=0.0032 Score=68.19 Aligned_cols=42 Identities=17% Similarity=0.242 Sum_probs=36.5
Q ss_pred eEEcCceEEEEEeeCCeEEEEEcCCcEEeccEEEEccCCchh
Q 006440 204 IILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK 245 (645)
Q Consensus 204 ~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a~lvVgADG~~S~ 245 (645)
.++.+++|++++.+++.+.|++.+|+++.+|+||.|.|....
T Consensus 242 ~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn 283 (493)
T 1m6i_A 242 KVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPN 283 (493)
T ss_dssp EEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEEC
T ss_pred EEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCCCcc
Confidence 478899999998777778899999999999999999998643
No 273
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.02 E-value=0.0045 Score=66.66 Aligned_cols=98 Identities=31% Similarity=0.272 Sum_probs=70.4
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~~ 156 (645)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.... .++..+
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~--------------------~~~~~~---------------- 223 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLP--------------------AVDEQV---------------- 223 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST--------------------TSCHHH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCc--------------------ccCHHH----------------
Confidence 45899999999999999999999999999998642110 000000
Q ss_pred cccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeCCeEEEEEcCC---cEEec
Q 006440 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENG---QCYAG 233 (645)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g---~~i~a 233 (645)
...+.+.|.+ .+ ..++.+++|++++.+++.+.+++.++ +++.+
T Consensus 224 --------------------------------~~~l~~~l~~-~G-v~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~ 269 (476)
T 3lad_A 224 --------------------------------AKEAQKILTK-QG-LKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAF 269 (476)
T ss_dssp --------------------------------HHHHHHHHHH-TT-EEEEETCEEEEEEECSSCEEEEEESSSEEEEEEE
T ss_pred --------------------------------HHHHHHHHHh-CC-CEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEEC
Confidence 0112223322 12 34778999999998888888888765 67999
Q ss_pred cEEEEccCCch
Q 006440 234 DLLIGADGIWS 244 (645)
Q Consensus 234 ~lvVgADG~~S 244 (645)
|.||.|-|...
T Consensus 270 D~vi~a~G~~p 280 (476)
T 3lad_A 270 DKLIVAVGRRP 280 (476)
T ss_dssp SEEEECSCEEE
T ss_pred CEEEEeeCCcc
Confidence 99999999764
No 274
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.01 E-value=0.00055 Score=77.10 Aligned_cols=36 Identities=25% Similarity=0.460 Sum_probs=33.1
Q ss_pred CCcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
...++|+|||||++|+++|+.|+++|++|+|+|+..
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~ 140 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARD 140 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 346799999999999999999999999999999864
No 275
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.98 E-value=0.00039 Score=74.52 Aligned_cols=36 Identities=17% Similarity=0.199 Sum_probs=32.6
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHH-C------CCeEEEEeccCc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKR-K------GFEVLVFEKDMS 111 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~-~------g~~~~~~~~~~~ 111 (645)
..++|+||||||+|+.+|..|++ + |++|+|||+.+.
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~ 44 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPT 44 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCC
Confidence 35799999999999999999999 7 999999998753
No 276
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=96.95 E-value=0.00066 Score=78.00 Aligned_cols=36 Identities=25% Similarity=0.460 Sum_probs=33.0
Q ss_pred CCcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
....+|+|||||++||++|+.|+++|++|+|+|+..
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~ 311 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARD 311 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecC
Confidence 345799999999999999999999999999999864
No 277
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=96.95 E-value=0.00054 Score=73.88 Aligned_cols=55 Identities=18% Similarity=0.141 Sum_probs=44.7
Q ss_pred HHHHHHHHHcC----------CceEEcCceEEEEEeeCCeEEEEEcCCcEEeccEEEEccCCchh
Q 006440 191 TLQQILAKAVG----------DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK 245 (645)
Q Consensus 191 ~l~~~L~~~~~----------~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a~lvVgADG~~S~ 245 (645)
.|.+.|.+.+. ...++.+++|++|+.++++++|++.+|++++||.||.|.+....
T Consensus 207 ~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l 271 (472)
T 1b37_A 207 AVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGGVTVKTEDNSVYSADYVMVSASLGVL 271 (472)
T ss_dssp HHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSCEEEEETTSCEEEESEEEECSCHHHH
T ss_pred HHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCcEEEEECCCCEEEcCEEEEecCHHHh
Confidence 45666666542 12488999999999998899999999999999999999997544
No 278
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=96.94 E-value=0.0053 Score=61.96 Aligned_cols=34 Identities=24% Similarity=0.252 Sum_probs=31.2
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 178 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRD 178 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCC
Confidence 3589999999999999999999999999999763
No 279
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=96.94 E-value=0.0051 Score=66.52 Aligned_cols=34 Identities=35% Similarity=0.413 Sum_probs=31.6
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
..+|+|||||+.|+.+|..|++.|.+|+++|+.+
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 227 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVD 227 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEEccc
Confidence 4689999999999999999999999999999864
No 280
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=96.93 E-value=0.0027 Score=64.61 Aligned_cols=34 Identities=21% Similarity=0.217 Sum_probs=31.3
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~ 206 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKD 206 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC
Confidence 4679999999999999999999999999999864
No 281
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=96.91 E-value=0.0055 Score=61.61 Aligned_cols=34 Identities=18% Similarity=0.160 Sum_probs=31.3
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 176 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRD 176 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCC
Confidence 4689999999999999999999999999999763
No 282
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=96.90 E-value=0.00045 Score=75.57 Aligned_cols=35 Identities=26% Similarity=0.408 Sum_probs=31.8
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHH-CCCeEEEEeccC
Q 006440 76 KKLRILVAGGGIGGLVFALAAKR-KGFEVLVFEKDM 110 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~-~g~~~~~~~~~~ 110 (645)
..||+||||+|++|+.+|..|++ .|++|+|+|+..
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~ 51 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGE 51 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSB
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCC
Confidence 46999999999999999999998 689999999874
No 283
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=96.88 E-value=0.0048 Score=66.20 Aligned_cols=98 Identities=22% Similarity=0.288 Sum_probs=69.9
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~~ 156 (645)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.... .++..+
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~--------------------~~~~~~---------------- 213 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILS--------------------RFDQDM---------------- 213 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST--------------------TSCHHH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccc--------------------ccCHHH----------------
Confidence 46899999999999999999999999999998642110 000000
Q ss_pred cccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeCCe-EEEE-EcCCcEEecc
Q 006440 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDK-VSVV-LENGQCYAGD 234 (645)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~-v~v~-~~~g~~i~a~ 234 (645)
...+.+.|.+ .+. .++.+++|++++.++++ +.|+ +.+|+ +.+|
T Consensus 214 --------------------------------~~~l~~~l~~-~Gv-~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD 258 (463)
T 4dna_A 214 --------------------------------RRGLHAAMEE-KGI-RILCEDIIQSVSADADGRRVATTMKHGE-IVAD 258 (463)
T ss_dssp --------------------------------HHHHHHHHHH-TTC-EEECSCCEEEEEECTTSCEEEEESSSCE-EEES
T ss_pred --------------------------------HHHHHHHHHH-CCC-EEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeC
Confidence 0112222222 233 47888999999887655 6788 88887 9999
Q ss_pred EEEEccCCchh
Q 006440 235 LLIGADGIWSK 245 (645)
Q Consensus 235 lvVgADG~~S~ 245 (645)
.||.|-|..+.
T Consensus 259 ~Vv~a~G~~p~ 269 (463)
T 4dna_A 259 QVMLALGRMPN 269 (463)
T ss_dssp EEEECSCEEES
T ss_pred EEEEeeCcccC
Confidence 99999998653
No 284
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.82 E-value=0.003 Score=65.55 Aligned_cols=33 Identities=24% Similarity=0.426 Sum_probs=31.2
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
.+|+|||||++|+.+|..|++.|.+|+++|+.+
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 176 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGA 176 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 689999999999999999999999999999864
No 285
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=96.79 E-value=0.0058 Score=67.72 Aligned_cols=97 Identities=24% Similarity=0.344 Sum_probs=68.1
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~~ 156 (645)
..+|+|||||+.|+.+|..|++.|.+|+++++.+..... ++..+.
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~--------------------~~~~~~--------------- 231 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP--------------------IDYEMA--------------- 231 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT--------------------SCHHHH---------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc--------------------CCHHHH---------------
Confidence 358999999999999999999999999999986421110 000000
Q ss_pred cccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeCCeEEEEEcCCcEEeccEE
Q 006440 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLL 236 (645)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a~lv 236 (645)
..+.+.|.+ .+ ..++.+++|++++.+++ .|++.+|+++.+|.|
T Consensus 232 ---------------------------------~~l~~~l~~-~G-V~i~~~~~v~~i~~~~~--~v~~~~g~~i~~D~V 274 (588)
T 3ics_A 232 ---------------------------------AYVHEHMKN-HD-VELVFEDGVDALEENGA--VVRLKSGSVIQTDML 274 (588)
T ss_dssp ---------------------------------HHHHHHHHH-TT-CEEECSCCEEEEEGGGT--EEEETTSCEEECSEE
T ss_pred ---------------------------------HHHHHHHHH-cC-CEEEECCeEEEEecCCC--EEEECCCCEEEcCEE
Confidence 112222222 23 23778889999987655 366788999999999
Q ss_pred EEccCCchh
Q 006440 237 IGADGIWSK 245 (645)
Q Consensus 237 VgADG~~S~ 245 (645)
|.|.|....
T Consensus 275 i~a~G~~p~ 283 (588)
T 3ics_A 275 ILAIGVQPE 283 (588)
T ss_dssp EECSCEEEC
T ss_pred EEccCCCCC
Confidence 999998654
No 286
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.79 E-value=0.00084 Score=72.02 Aligned_cols=35 Identities=26% Similarity=0.343 Sum_probs=32.3
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCC--CeEEEEeccCc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKG--FEVLVFEKDMS 111 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g--~~~~~~~~~~~ 111 (645)
.++|+||||||+|+.+|..|+++| ++|+|||+.+.
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~ 42 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLV 42 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCc
Confidence 479999999999999999999998 99999998753
No 287
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=96.79 E-value=0.0074 Score=62.30 Aligned_cols=107 Identities=16% Similarity=0.208 Sum_probs=68.4
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~~ 156 (645)
..+|+|||+|..|+.+|..|++.|.+|+++++.+.... + ..+ . .+.
T Consensus 166 ~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~------------~-------~~d---------~------~~~ 211 (369)
T 3d1c_A 166 KGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLND------------P-------DAD---------P------SVR 211 (369)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCEEEEECC--------------------------------------C------TTS
T ss_pred CCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCC------------C-------CCC---------C------Ccc
Confidence 35899999999999999999999999999998632110 0 000 0 000
Q ss_pred cccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeCCeEEEEEcCCcEEe-ccE
Q 006440 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYA-GDL 235 (645)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~-a~l 235 (645)
++ . -.+..+.+.|.+ .+...++.+++|++++.+++.+.|++.+|+++. +|.
T Consensus 212 -------------~~----~----------~~~~~l~~~l~~-~g~v~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~d~ 263 (369)
T 3d1c_A 212 -------------LS----P----------YTRQRLGNVIKQ-GARIEMNVHYTVKDIDFNNGQYHISFDSGQSVHTPHE 263 (369)
T ss_dssp -------------CC----H----------HHHHHHHHHHHT-TCCEEEECSCCEEEEEEETTEEEEEESSSCCEEESSC
T ss_pred -------------CC----H----------HHHHHHHHHHhh-CCcEEEecCcEEEEEEecCCceEEEecCCeEeccCCc
Confidence 00 0 001123333322 122347788999999877778888899997665 599
Q ss_pred EEEccCCchh
Q 006440 236 LIGADGIWSK 245 (645)
Q Consensus 236 vVgADG~~S~ 245 (645)
||.|.|....
T Consensus 264 vi~a~G~~~~ 273 (369)
T 3d1c_A 264 PILATGFDAT 273 (369)
T ss_dssp CEECCCBCGG
T ss_pred eEEeeccCCc
Confidence 9999997643
No 288
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.78 E-value=0.00087 Score=79.23 Aligned_cols=35 Identities=26% Similarity=0.448 Sum_probs=32.3
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCC-eEEEEeccC
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~-~~~~~~~~~ 110 (645)
..+||+||||||+|+++|..|+++|+ +|+|||+..
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~ 221 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQE 221 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 36799999999999999999999999 799999864
No 289
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=96.77 E-value=0.0085 Score=64.53 Aligned_cols=98 Identities=20% Similarity=0.144 Sum_probs=67.9
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~~ 156 (645)
..+|+|||||..|+.+|..|++.|.+|+++++.+.... .++..+.
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--------------------~~d~~~~--------------- 231 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLR--------------------SFDSMIS--------------- 231 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT--------------------TSCHHHH---------------
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCcccc--------------------ccCHHHH---------------
Confidence 35899999999999999999999999999998642111 0100010
Q ss_pred cccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeCCe--EEEEEcC-------
Q 006440 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDK--VSVVLEN------- 227 (645)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~--v~v~~~~------- 227 (645)
..+.+.|.+ .+ ..++.++++++++.++++ +.+.+.+
T Consensus 232 ---------------------------------~~~~~~l~~-~g-v~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~ 276 (478)
T 3dk9_A 232 ---------------------------------TNCTEELEN-AG-VEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVM 276 (478)
T ss_dssp ---------------------------------HHHHHHHHH-TT-CEEETTEEEEEEEECSSSEEEEEEECCTTSCCEE
T ss_pred ---------------------------------HHHHHHHHH-CC-CEEEeCCEEEEEEEcCCCcEEEEEEccCCCCccc
Confidence 112222222 22 347888999999876555 6677765
Q ss_pred CcEEeccEEEEccCCch
Q 006440 228 GQCYAGDLLIGADGIWS 244 (645)
Q Consensus 228 g~~i~a~lvVgADG~~S 244 (645)
|+++.+|.||.|-|...
T Consensus 277 g~~~~~D~vi~a~G~~p 293 (478)
T 3dk9_A 277 TMIPDVDCLLWAIGRVP 293 (478)
T ss_dssp EEEEEESEEEECSCEEE
T ss_pred ceEEEcCEEEEeecccc
Confidence 25789999999999753
No 290
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=96.75 E-value=0.0067 Score=64.74 Aligned_cols=96 Identities=23% Similarity=0.322 Sum_probs=65.6
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhcccccccccc
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRING 157 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~~~ 157 (645)
.+|+|||||+.|+.+|..|++.|.+|+++++.+..... .++..+
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-------------------~~~~~~----------------- 192 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRR-------------------SFDKEV----------------- 192 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT-------------------TSCHHH-----------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh-------------------hcCHHH-----------------
Confidence 48999999999999999999999999999986421100 000000
Q ss_pred ccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeCCeEEEEEcCCcEEeccEEE
Q 006440 158 LVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLI 237 (645)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a~lvV 237 (645)
...+.+.|.+. ..++.++++++++.++ .+...+.+++++.+|.||
T Consensus 193 -------------------------------~~~l~~~l~~~---v~i~~~~~v~~i~~~~-~v~~v~~~g~~i~~D~Vv 237 (449)
T 3kd9_A 193 -------------------------------TDILEEKLKKH---VNLRLQEITMKIEGEE-RVEKVVTDAGEYKAELVI 237 (449)
T ss_dssp -------------------------------HHHHHHHHTTT---SEEEESCCEEEEECSS-SCCEEEETTEEEECSEEE
T ss_pred -------------------------------HHHHHHHHHhC---cEEEeCCeEEEEeccC-cEEEEEeCCCEEECCEEE
Confidence 01122222222 3477788898887654 444445677889999999
Q ss_pred EccCCch
Q 006440 238 GADGIWS 244 (645)
Q Consensus 238 gADG~~S 244 (645)
.|-|...
T Consensus 238 ~a~G~~p 244 (449)
T 3kd9_A 238 LATGIKP 244 (449)
T ss_dssp ECSCEEE
T ss_pred EeeCCcc
Confidence 9999764
No 291
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.73 E-value=0.00085 Score=78.76 Aligned_cols=35 Identities=31% Similarity=0.506 Sum_probs=32.6
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
..+||+||||||+|+++|..|+++|++|+|+|+.+
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~ 161 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRSGARVMLLDERA 161 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred cCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 35799999999999999999999999999999874
No 292
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=96.72 E-value=0.00055 Score=75.03 Aligned_cols=35 Identities=26% Similarity=0.476 Sum_probs=32.3
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (645)
..+|+||||+|.+|+++|..|++ |.+|+|+|+...
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~ 59 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSL 59 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBC
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCC
Confidence 46899999999999999999999 999999999753
No 293
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=96.66 E-value=0.0085 Score=63.71 Aligned_cols=33 Identities=18% Similarity=0.268 Sum_probs=31.0
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
.+|+|||||+.|+.+|..|++.|.+|+|+|+..
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 180 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYERGLHPTLIHRSD 180 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSS
T ss_pred cEEEEECCccchhhhHHHHHhcCCcceeeeeec
Confidence 479999999999999999999999999999864
No 294
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=96.66 E-value=0.001 Score=73.26 Aligned_cols=36 Identities=22% Similarity=0.409 Sum_probs=33.0
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCC-CeEEEEeccCc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKG-FEVLVFEKDMS 111 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g-~~~~~~~~~~~ 111 (645)
..+|+||||||.||+++|..|++.| .+|+|+|+...
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 4699999999999999999999998 79999999754
No 295
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.54 E-value=0.0019 Score=70.26 Aligned_cols=36 Identities=31% Similarity=0.477 Sum_probs=33.3
Q ss_pred CCcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
...+|++|||+|++|+.+|..|++.|.+|+|+|+..
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~ 44 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGR 44 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCC
Confidence 356899999999999999999999999999999864
No 296
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=96.52 E-value=0.0016 Score=70.67 Aligned_cols=35 Identities=29% Similarity=0.382 Sum_probs=32.7
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
..+|++|||+|++|+++|..|++.|++|+|+|+..
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~ 38 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQ 38 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 45899999999999999999999999999999865
No 297
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=96.48 E-value=0.016 Score=62.41 Aligned_cols=97 Identities=24% Similarity=0.247 Sum_probs=66.3
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccccccc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~~~~~~~~~~~~~~ 156 (645)
..+|+|||+|+.|+.+|..|++.|.+|+++++.. ... .++..+.
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~l~--------------------~~d~~~~--------------- 230 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSI-VLR--------------------GFDQQMA--------------- 230 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC-SST--------------------TSCHHHH---------------
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC-CCc--------------------ccCHHHH---------------
Confidence 3579999999999999999999999999998742 100 0100000
Q ss_pred cccccCCCceeeeccCCCchhhcCCCeEEeeCHHHHHHHHHHHcCCceEEcCceEEEEEeeCC-eEEEEEcCCc-----E
Q 006440 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGD-KVSVVLENGQ-----C 230 (645)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~-~v~v~~~~g~-----~ 230 (645)
..+.+.|.+ .+.. ++.++++++++.+++ .+.|++.+++ +
T Consensus 231 ---------------------------------~~l~~~l~~-~Gv~-i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~ 275 (483)
T 3dgh_A 231 ---------------------------------ELVAASMEE-RGIP-FLRKTVPLSVEKQDDGKLLVKYKNVETGEESE 275 (483)
T ss_dssp ---------------------------------HHHHHHHHH-TTCC-EEETEEEEEEEECTTSCEEEEEEETTTCCEEE
T ss_pred ---------------------------------HHHHHHHHh-CCCE-EEeCCEEEEEEEcCCCcEEEEEecCCCCceeE
Confidence 012222222 2333 778899999987554 4677776653 7
Q ss_pred EeccEEEEccCCch
Q 006440 231 YAGDLLIGADGIWS 244 (645)
Q Consensus 231 i~a~lvVgADG~~S 244 (645)
+.+|.||.|.|...
T Consensus 276 ~~~D~vi~a~G~~p 289 (483)
T 3dgh_A 276 DVYDTVLWAIGRKG 289 (483)
T ss_dssp EEESEEEECSCEEE
T ss_pred EEcCEEEECccccc
Confidence 99999999999753
No 298
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=96.48 E-value=0.0015 Score=71.99 Aligned_cols=35 Identities=31% Similarity=0.556 Sum_probs=32.2
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHC-CCeEEEEeccC
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRK-GFEVLVFEKDM 110 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~-g~~~~~~~~~~ 110 (645)
..||+||||||.||+++|..|++. |++|+|+|+..
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 469999999999999999999975 89999999976
No 299
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=96.44 E-value=0.014 Score=58.96 Aligned_cols=34 Identities=21% Similarity=0.249 Sum_probs=31.2
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 185 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRD 185 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCC
Confidence 3589999999999999999999999999999863
No 300
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=96.41 E-value=0.018 Score=57.65 Aligned_cols=34 Identities=21% Similarity=0.195 Sum_probs=31.2
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~ 180 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRD 180 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSS
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCC
Confidence 3689999999999999999999999999999764
No 301
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=96.40 E-value=0.012 Score=59.81 Aligned_cols=34 Identities=21% Similarity=0.359 Sum_probs=31.3
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
..+|+|||+|..|+.+|..|++.|.+|+++++.+
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~ 185 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRP 185 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCC
Confidence 4689999999999999999999999999999864
No 302
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=96.37 E-value=0.012 Score=59.13 Aligned_cols=34 Identities=26% Similarity=0.242 Sum_probs=31.2
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 177 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAP 177 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCc
Confidence 3589999999999999999999999999999764
No 303
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=96.34 E-value=0.023 Score=62.00 Aligned_cols=35 Identities=20% Similarity=0.153 Sum_probs=32.6
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (645)
..+|+|||+|..|+-+|..|++.|.+|+++++.+.
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred cceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 46899999999999999999999999999999764
No 304
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.29 E-value=0.0026 Score=70.33 Aligned_cols=36 Identities=36% Similarity=0.594 Sum_probs=33.2
Q ss_pred CCcCcEEEEcCCHHHHHHHHHHHH-CCCeEEEEeccC
Q 006440 75 NKKLRILVAGGGIGGLVFALAAKR-KGFEVLVFEKDM 110 (645)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~-~g~~~~~~~~~~ 110 (645)
+..+|++|||+|++|+++|..|++ .|++|+|+|+..
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~ 58 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGF 58 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSC
T ss_pred cccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 456899999999999999999999 899999999864
No 305
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=96.28 E-value=0.014 Score=58.61 Aligned_cols=34 Identities=21% Similarity=0.156 Sum_probs=31.3
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~ 187 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRD 187 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCC
Confidence 4689999999999999999999999999999864
No 306
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=96.26 E-value=0.011 Score=60.90 Aligned_cols=34 Identities=18% Similarity=0.380 Sum_probs=31.2
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~ 196 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGH 196 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC
Confidence 3589999999999999999999999999999864
No 307
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=96.25 E-value=0.017 Score=58.55 Aligned_cols=34 Identities=21% Similarity=0.245 Sum_probs=31.4
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
..+|+|||+|..|+.+|..|++.|.+|+++++.+
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~ 192 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRD 192 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCeEEEECCChHHHHHHHHHHhcCCeEEEEecCC
Confidence 4689999999999999999999999999999864
No 308
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.23 E-value=0.0015 Score=71.66 Aligned_cols=34 Identities=29% Similarity=0.420 Sum_probs=31.7
Q ss_pred cCcEEEEcCCHHHHHHHHHHHH-CCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKR-KGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~-~g~~~~~~~~~~ 110 (645)
.+|+||||||.+|+++|..|++ .|++|+|+|+.+
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~ 36 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGV 36 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSB
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCC
Confidence 4899999999999999999998 799999999865
No 309
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=96.16 E-value=0.028 Score=60.66 Aligned_cols=33 Identities=21% Similarity=0.180 Sum_probs=30.5
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEecc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (645)
..+|+|||||+.|+.+|..|++.|.+|+++++.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~ 217 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRS 217 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcC
Confidence 347999999999999999999999999999975
No 310
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.10 E-value=0.0032 Score=69.08 Aligned_cols=35 Identities=23% Similarity=0.396 Sum_probs=32.6
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHC-CCeEEEEeccC
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRK-GFEVLVFEKDM 110 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~-g~~~~~~~~~~ 110 (645)
..+|++|||+|++|+++|..|++. |.+|+|+|+..
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~ 47 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGP 47 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCC
Confidence 468999999999999999999998 99999999874
No 311
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=96.03 E-value=0.02 Score=58.28 Aligned_cols=34 Identities=24% Similarity=0.181 Sum_probs=31.2
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~ 188 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRD 188 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCC
Confidence 4689999999999999999999999999999763
No 312
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=95.96 E-value=0.046 Score=55.00 Aligned_cols=34 Identities=24% Similarity=0.294 Sum_probs=31.0
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~ 188 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMP 188 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCC
Confidence 3579999999999999999999999999999753
No 313
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.85 E-value=0.01 Score=52.07 Aligned_cols=35 Identities=17% Similarity=0.171 Sum_probs=32.2
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (645)
+.+|+|+|+|..|..+|..|.+.|++|+++|+++.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 45799999999999999999999999999998753
No 314
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=95.83 E-value=0.025 Score=61.18 Aligned_cols=40 Identities=18% Similarity=0.081 Sum_probs=28.3
Q ss_pred eEEcCceEEEEEeeCCeEEEEEcCCc----EEeccEEEEccCCc
Q 006440 204 IILNESNVIDFKDHGDKVSVVLENGQ----CYAGDLLIGADGIW 243 (645)
Q Consensus 204 ~i~~~~~v~~i~~~~~~v~v~~~~g~----~i~a~lvVgADG~~ 243 (645)
.++.+++|++++.++-.......||+ ++.+|+||-|-|..
T Consensus 288 ~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~ 331 (502)
T 4g6h_A 288 KVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNK 331 (502)
T ss_dssp EEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEE
T ss_pred eeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCc
Confidence 37889999988643323334455663 69999999999963
No 315
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=95.76 E-value=0.023 Score=62.21 Aligned_cols=36 Identities=25% Similarity=0.330 Sum_probs=32.8
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (645)
...+|+|||+|..|+-+|..|++.+.+|+++++.+.
T Consensus 184 ~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 184 TGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp BTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 346899999999999999999999999999999764
No 316
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.73 E-value=0.012 Score=52.71 Aligned_cols=35 Identities=29% Similarity=0.332 Sum_probs=32.0
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (645)
...|+|+|+|..|..+|..|.+.|++|+++|+++.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 45799999999999999999999999999998754
No 317
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=95.66 E-value=0.0095 Score=65.78 Aligned_cols=35 Identities=26% Similarity=0.433 Sum_probs=33.2
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
.+|||+|||+|+.|..+|..|++.|.+|+++|+++
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~ 41 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRS 41 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 36999999999999999999999999999999985
No 318
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=95.61 E-value=0.024 Score=60.31 Aligned_cols=33 Identities=12% Similarity=0.007 Sum_probs=30.7
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCe-EEEEecc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFE-VLVFEKD 109 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~-~~~~~~~ 109 (645)
..+|+|||+|.+|+-+|..|++.|.+ |+++++.
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~ 245 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAKHPIYQSLLG 245 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTT
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCC
Confidence 46799999999999999999999999 9999986
No 319
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=95.46 E-value=0.044 Score=55.26 Aligned_cols=34 Identities=24% Similarity=0.328 Sum_probs=31.2
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~ 187 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRD 187 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSS
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecC
Confidence 4689999999999999999999999999999763
No 320
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=95.37 E-value=0.11 Score=57.37 Aligned_cols=32 Identities=25% Similarity=0.147 Sum_probs=30.2
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCeEEEEecc
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (645)
.+|+|||||..|+.+|..|++.|.+|+++++.
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 47999999999999999999999999999975
No 321
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=95.36 E-value=0.11 Score=56.42 Aligned_cols=32 Identities=25% Similarity=0.223 Sum_probs=30.0
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCeEEEEecc
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (645)
.+|+|||||..|+.+|..|++.|.+|+++++.
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 46999999999999999999999999999974
No 322
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=95.27 E-value=0.032 Score=61.00 Aligned_cols=35 Identities=20% Similarity=0.316 Sum_probs=32.5
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (645)
..+|+|||+|..|+-+|..|++.|.+|+++++.+.
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 46899999999999999999999999999999764
No 323
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.25 E-value=0.017 Score=50.56 Aligned_cols=33 Identities=21% Similarity=0.315 Sum_probs=30.9
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
..|+|+|+|..|..+|..|.++|++|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 479999999999999999999999999999864
No 324
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.20 E-value=0.021 Score=49.67 Aligned_cols=33 Identities=27% Similarity=0.502 Sum_probs=30.7
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
.+|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 579999999999999999999999999999864
No 325
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.17 E-value=0.023 Score=50.62 Aligned_cols=34 Identities=24% Similarity=0.241 Sum_probs=31.3
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
+.+|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 4579999999999999999999999999999863
No 326
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=95.14 E-value=0.06 Score=53.25 Aligned_cols=32 Identities=22% Similarity=0.162 Sum_probs=29.6
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEecc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (645)
..+|+|||+|+.|+.+|..|++.| +|+++++.
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~ 172 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDWG-ETTFFTNG 172 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGTS-EEEEECTT
T ss_pred CCEEEEEecCccHHHHHHHhhhcC-cEEEEECC
Confidence 468999999999999999999999 99999875
No 327
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=94.77 E-value=0.028 Score=47.09 Aligned_cols=33 Identities=30% Similarity=0.424 Sum_probs=30.6
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCC-CeEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRKG-FEVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g-~~~~~~~~~~ 110 (645)
.+|+|+|+|..|..++..|.+.| ++|+++++++
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 47999999999999999999999 9999999864
No 328
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=94.77 E-value=0.078 Score=57.61 Aligned_cols=34 Identities=26% Similarity=0.242 Sum_probs=31.2
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
..+|+|||+|..|+-+|..|++.|.+|+++++.+
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~ 388 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAP 388 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCc
Confidence 4689999999999999999999999999999763
No 329
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=94.75 E-value=0.41 Score=51.58 Aligned_cols=34 Identities=15% Similarity=0.197 Sum_probs=29.6
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHC--CCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~--g~~~~~~~~~~ 110 (645)
..+|+|||+|-+|.-.+..|+++ +.+|+++=|.+
T Consensus 246 gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~ 281 (501)
T 4b63_A 246 PYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDS 281 (501)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSS
T ss_pred CcEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCC
Confidence 35799999999999999999875 78999998865
No 330
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=94.53 E-value=0.028 Score=57.25 Aligned_cols=33 Identities=18% Similarity=0.303 Sum_probs=30.0
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
..+|+|||+|..|+-+|..|++.| +|+++.+..
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 468999999999999999999999 799999864
No 331
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=94.15 E-value=0.048 Score=54.65 Aligned_cols=33 Identities=27% Similarity=0.437 Sum_probs=30.8
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
.+|.|||+|..|..+|..|++.|++|+++|+++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999864
No 332
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.14 E-value=0.043 Score=50.42 Aligned_cols=34 Identities=21% Similarity=0.103 Sum_probs=31.3
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHC-CCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRK-GFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~-g~~~~~~~~~~ 110 (645)
..+|+|+|+|..|..+|..|.+. |++|+++|+++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 45799999999999999999999 99999999864
No 333
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=94.14 E-value=0.067 Score=60.32 Aligned_cols=34 Identities=24% Similarity=0.207 Sum_probs=30.9
Q ss_pred cCcEEEEc--CCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAG--GGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g--~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
..+|+||| +|..|+.+|..|++.|.+|+++++.+
T Consensus 523 g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~ 558 (690)
T 3k30_A 523 GKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGA 558 (690)
T ss_dssp SSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccc
Confidence 35699999 99999999999999999999999763
No 334
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=94.06 E-value=0.038 Score=55.50 Aligned_cols=33 Identities=18% Similarity=0.208 Sum_probs=31.0
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
.+|+|||||+.|+-+|..|++.|.+|+|+|+.+
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 178 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRD 178 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeccc
Confidence 589999999999999999999999999999864
No 335
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=94.05 E-value=0.047 Score=47.55 Aligned_cols=33 Identities=27% Similarity=0.248 Sum_probs=30.6
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
..|+|+|+|..|..+|..|.+.|++|+++|++.
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999864
No 336
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=93.70 E-value=0.047 Score=56.86 Aligned_cols=35 Identities=26% Similarity=0.203 Sum_probs=32.0
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (645)
..+|+|||||+.|+.+|..|++.|.+|+++|+.+.
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~ 180 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGTPASIGIILEY 180 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCc
Confidence 35799999999999999999999999999998753
No 337
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=93.65 E-value=0.3 Score=51.90 Aligned_cols=34 Identities=26% Similarity=0.289 Sum_probs=29.6
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHC--------------------CC-eEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRK--------------------GF-EVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~--------------------g~-~~~~~~~~~ 110 (645)
..+|+|||+|.+|+-+|..|++. |. +|+|++++.
T Consensus 147 ~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~ 201 (456)
T 1lqt_A 147 GARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRG 201 (456)
T ss_dssp SSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCC
Confidence 46899999999999999999974 65 899999874
No 338
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=93.45 E-value=0.059 Score=54.16 Aligned_cols=34 Identities=24% Similarity=0.475 Sum_probs=30.9
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
..+|.|||+|..|...|..++..|++|+++|..+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3579999999999999999999999999999764
No 339
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=93.40 E-value=0.059 Score=53.92 Aligned_cols=34 Identities=24% Similarity=0.403 Sum_probs=31.3
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
..+|+|||||..|+-+|..|++.|.+|+|+++..
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~ 185 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRD 185 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCeEEEECCChHHHHHHHHHHHhCCeeeeecccc
Confidence 3579999999999999999999999999999763
No 340
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.37 E-value=0.056 Score=51.24 Aligned_cols=33 Identities=18% Similarity=0.443 Sum_probs=30.8
Q ss_pred cEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCc
Q 006440 79 RILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (645)
Q Consensus 79 ~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (645)
+|+|+|+|..|..+|..|.++|++|+++|+++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 34 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDRE 34 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 699999999999999999999999999998753
No 341
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=93.36 E-value=0.083 Score=52.34 Aligned_cols=33 Identities=24% Similarity=0.432 Sum_probs=31.0
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
.+|.|||+|..|...|..|++.|++|+++|+++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 579999999999999999999999999999864
No 342
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=93.08 E-value=0.072 Score=53.74 Aligned_cols=34 Identities=24% Similarity=0.475 Sum_probs=31.1
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
..+|.|||+|..|...|..|+++|++|+++|+++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999874
No 343
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=93.01 E-value=0.099 Score=53.05 Aligned_cols=34 Identities=12% Similarity=0.335 Sum_probs=31.3
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCC-eEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~-~~~~~~~~~ 110 (645)
..+|+|||+|-.|.++|..|++.|+ +|+++|.+.
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 3589999999999999999999998 999999864
No 344
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=92.78 E-value=0.098 Score=52.86 Aligned_cols=32 Identities=31% Similarity=0.443 Sum_probs=30.4
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCeEEEEecc
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (645)
.+|+|||+|-.|.++|..|++.|++|++++|.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRS 34 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 57999999999999999999999999999986
No 345
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=92.68 E-value=0.12 Score=54.44 Aligned_cols=35 Identities=26% Similarity=0.299 Sum_probs=31.9
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (645)
..+|.|||.|-+||.+|..|+++|++|+.+|-++.
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~ 55 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPS 55 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHH
Confidence 45899999999999999999999999999997653
No 346
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=92.56 E-value=0.76 Score=54.14 Aligned_cols=33 Identities=24% Similarity=0.233 Sum_probs=30.5
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCC-eEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~-~~~~~~~~~ 110 (645)
.+|+|||||..|+-+|..|++.|. +|+++++.+
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 389999999999999999999997 899999874
No 347
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=92.32 E-value=0.12 Score=52.61 Aligned_cols=32 Identities=22% Similarity=0.286 Sum_probs=30.2
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCeEEEEecc
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (645)
.+|.|||+|-.|.++|..|++.|++|+++++.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 57999999999999999999999999999974
No 348
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=92.31 E-value=0.32 Score=56.95 Aligned_cols=33 Identities=21% Similarity=0.103 Sum_probs=30.8
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
.+|+|||+|+.|+.+|..|++.|.+|+|+|+.+
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~ 317 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARS 317 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCS
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCC
Confidence 579999999999999999999999999999864
No 349
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=92.18 E-value=0.59 Score=52.37 Aligned_cols=29 Identities=17% Similarity=0.124 Sum_probs=26.0
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEE
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLV 105 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~ 105 (645)
..+|+|||||..|+-+|..|++.|.+|++
T Consensus 494 ~~~VvVIGgG~~g~E~A~~l~~~G~~vtv 522 (671)
T 1ps9_A 494 GNKVAIIGCGGIGFDTAMYLSQPGESTSQ 522 (671)
T ss_dssp CSEEEEECCHHHHHHHHHHHTCCSSCGGG
T ss_pred CCeEEEECCChhHHHHHHHHHhcCCCccc
Confidence 46899999999999999999999987764
No 350
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=92.15 E-value=0.15 Score=47.95 Aligned_cols=35 Identities=20% Similarity=0.241 Sum_probs=31.4
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (645)
..+|.|||+|-.|.++|..|++.|++|+++++.+.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 35799999999999999999999999999998753
No 351
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=92.04 E-value=0.14 Score=54.54 Aligned_cols=34 Identities=24% Similarity=0.146 Sum_probs=31.5
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
..+|.|||.|.+|+++|..|+++|++|+++|.+.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 4689999999999999999999999999999864
No 352
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=91.98 E-value=0.13 Score=52.63 Aligned_cols=35 Identities=31% Similarity=0.393 Sum_probs=31.9
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
...+|.|||+|-.|.++|..|++.|++|+++++++
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred cCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 34689999999999999999999999999999863
No 353
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=91.96 E-value=0.17 Score=50.88 Aligned_cols=35 Identities=23% Similarity=0.395 Sum_probs=31.8
Q ss_pred CCcCcEEEEcCCHHHHHHHHHHHHCCC-eEEEEecc
Q 006440 75 NKKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKD 109 (645)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~-~~~~~~~~ 109 (645)
+...+|.|||+|..|..+|..|++.|+ +|+++|..
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 344689999999999999999999999 99999986
No 354
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=91.96 E-value=0.15 Score=50.42 Aligned_cols=32 Identities=28% Similarity=0.323 Sum_probs=30.2
Q ss_pred cEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 79 RILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 79 ~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
+|.|||+|..|..+|..|++.|++|+++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 69999999999999999999999999999864
No 355
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=91.96 E-value=0.099 Score=51.25 Aligned_cols=34 Identities=32% Similarity=0.444 Sum_probs=31.3
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEecc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (645)
....|+|||||.+|...|..|.+.|.+|+|+++.
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 3468999999999999999999999999999975
No 356
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=91.94 E-value=0.17 Score=50.86 Aligned_cols=34 Identities=26% Similarity=0.516 Sum_probs=31.5
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCc
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (645)
.+|.|||.|..|..+|..|++.|++|+++++.+.
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 5799999999999999999999999999998753
No 357
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=91.89 E-value=0.14 Score=54.80 Aligned_cols=34 Identities=24% Similarity=0.436 Sum_probs=31.8
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
.++|.|||+|-.|+.+|..|++.|++|+++|+++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4689999999999999999999999999999864
No 358
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=91.88 E-value=0.15 Score=51.47 Aligned_cols=34 Identities=24% Similarity=0.374 Sum_probs=31.1
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCC-eEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~-~~~~~~~~~ 110 (645)
..+|.|||+|-.|..+|..|++.|+ +|+++|++.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 3579999999999999999999999 999999864
No 359
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=91.82 E-value=0.12 Score=52.08 Aligned_cols=32 Identities=31% Similarity=0.517 Sum_probs=29.8
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCeEEEEecc
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (645)
.+|.|||+|-.|.++|..|++.|++|++++|.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcC
Confidence 47999999999999999999999999999985
No 360
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=91.81 E-value=0.15 Score=52.25 Aligned_cols=34 Identities=35% Similarity=0.401 Sum_probs=31.1
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
..+|.|||+|-.|..+|..|++.|++|+++++.+
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3589999999999999999999999999999863
No 361
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=91.72 E-value=0.14 Score=48.49 Aligned_cols=35 Identities=23% Similarity=0.201 Sum_probs=31.8
Q ss_pred CCcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEecc
Q 006440 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (645)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (645)
.....|+|||||.+|...|..|.+.|.+|+|+++.
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 34578999999999999999999999999999864
No 362
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=91.68 E-value=0.11 Score=55.14 Aligned_cols=33 Identities=21% Similarity=0.311 Sum_probs=30.9
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
.+|+|||.|.+|+++|..|+++|++|+++|.+.
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~ 38 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRM 38 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTTCCCEEEESSS
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCEEEEEECCC
Confidence 479999999999999999999999999999864
No 363
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=91.66 E-value=0.16 Score=50.91 Aligned_cols=33 Identities=21% Similarity=0.383 Sum_probs=30.5
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
.+|.|||+|..|..+|..|++.|++|+++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 479999999999999999999999999999863
No 364
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=91.59 E-value=0.17 Score=51.03 Aligned_cols=33 Identities=27% Similarity=0.482 Sum_probs=30.6
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCC--eEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~--~~~~~~~~~ 110 (645)
.+|+|||+|-.|..+|..|++.|+ +|+++|++.
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 579999999999999999999999 999999863
No 365
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=91.57 E-value=0.2 Score=47.84 Aligned_cols=36 Identities=25% Similarity=0.352 Sum_probs=31.5
Q ss_pred CCcCcEEEEcC-CHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 75 NKKLRILVAGG-GIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 75 ~~~~~v~i~g~-g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
.....|+|.|| |-.|..++..|.++|++|+++.|+.
T Consensus 19 l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 19 FQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred cCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 34568999998 9999999999999999999999874
No 366
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=91.56 E-value=0.16 Score=53.86 Aligned_cols=34 Identities=35% Similarity=0.366 Sum_probs=31.5
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCc
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (645)
++|.|||+|-.|+.+|..|++.|++|+++|+++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~ 36 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRN 36 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHH
Confidence 4799999999999999999999999999998753
No 367
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=91.55 E-value=0.19 Score=50.67 Aligned_cols=36 Identities=25% Similarity=0.346 Sum_probs=31.8
Q ss_pred CCcCcEEEEcCCHHHHHHHHHHHHCCC-eEEEEeccC
Q 006440 75 NKKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (645)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~-~~~~~~~~~ 110 (645)
+...+|.|||+|..|.++|..|+..|+ +|+++|...
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 344689999999999999999999999 999999864
No 368
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=91.40 E-value=0.074 Score=56.67 Aligned_cols=35 Identities=20% Similarity=0.341 Sum_probs=32.1
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (645)
.++|+|+|+|-.|..+|..|...|++|+++|+++.
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~ 37 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGD 37 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 35799999999999999999999999999998754
No 369
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=91.34 E-value=0.21 Score=50.37 Aligned_cols=33 Identities=27% Similarity=0.461 Sum_probs=30.6
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCC-eEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~-~~~~~~~~~ 110 (645)
.+|.|||+|-+|..+|..|+..|+ +|+++|.+.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 579999999999999999999999 999999763
No 370
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=91.23 E-value=0.21 Score=50.57 Aligned_cols=33 Identities=27% Similarity=0.373 Sum_probs=30.8
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCC-eEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~-~~~~~~~~~ 110 (645)
.+|.|||+|-.|..+|..|++.|+ +|+++|.+.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 579999999999999999999999 999999864
No 371
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=91.10 E-value=0.21 Score=51.63 Aligned_cols=34 Identities=29% Similarity=0.394 Sum_probs=31.6
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
..+|+|+|+|++|+.+|..|...|.+|+++|+.+
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4689999999999999999999999999999874
No 372
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=91.06 E-value=0.26 Score=52.06 Aligned_cols=34 Identities=21% Similarity=0.364 Sum_probs=31.6
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
-.+|.|||+|..|...|..|++.|++|+++|+++
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 87 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNE 87 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcH
Confidence 3579999999999999999999999999999874
No 373
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=90.87 E-value=0.27 Score=49.44 Aligned_cols=34 Identities=21% Similarity=0.237 Sum_probs=31.3
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
..+|.|||+|..|..+|..|++.|++|+++++.+
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4679999999999999999999999999999864
No 374
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=90.85 E-value=0.26 Score=49.54 Aligned_cols=34 Identities=26% Similarity=0.501 Sum_probs=31.2
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCC--eEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~--~~~~~~~~~ 110 (645)
..+|.|||.|..|.++|..|++.|+ +|+++|+.+
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 4689999999999999999999999 999999864
No 375
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=90.78 E-value=0.22 Score=49.80 Aligned_cols=31 Identities=29% Similarity=0.477 Sum_probs=29.5
Q ss_pred cEEEEcCCHHHHHHHHHHHHCCC--eEEEEecc
Q 006440 79 RILVAGGGIGGLVFALAAKRKGF--EVLVFEKD 109 (645)
Q Consensus 79 ~v~i~g~g~~g~~~a~~l~~~g~--~~~~~~~~ 109 (645)
+|+|||+|-.|..+|..|+..|+ +|+++|.+
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~ 34 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRD 34 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 69999999999999999999999 99999986
No 376
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=90.76 E-value=0.15 Score=50.77 Aligned_cols=33 Identities=15% Similarity=0.218 Sum_probs=30.8
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
.+|+|||+|-.|.++|..|++.|++|++++|..
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 479999999999999999999999999999874
No 377
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=90.75 E-value=0.2 Score=53.30 Aligned_cols=34 Identities=29% Similarity=0.350 Sum_probs=31.9
Q ss_pred CcEEEEcCCHHHHHHHHHHHHC-CC-eEEEEeccCc
Q 006440 78 LRILVAGGGIGGLVFALAAKRK-GF-EVLVFEKDMS 111 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~-g~-~~~~~~~~~~ 111 (645)
.+|.|||+|-.|+.+|..|++. |+ +|+++|+++.
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 5799999999999999999999 99 9999998765
No 378
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=90.70 E-value=0.23 Score=52.42 Aligned_cols=35 Identities=34% Similarity=0.464 Sum_probs=32.5
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (645)
..+|.|||.|-.|+.+|..|++.|++|+++|+++.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46899999999999999999999999999999764
No 379
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=90.52 E-value=0.21 Score=52.24 Aligned_cols=35 Identities=23% Similarity=0.388 Sum_probs=32.0
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (645)
..+|+|+|.|..|..+|..|.+.|++|+++|+++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 34799999999999999999999999999998754
No 380
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=90.52 E-value=0.22 Score=49.75 Aligned_cols=34 Identities=18% Similarity=0.190 Sum_probs=31.3
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
..+|.|||.|-.|..+|..|++.|++|+++++++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3579999999999999999999999999999864
No 381
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=90.43 E-value=0.28 Score=47.35 Aligned_cols=36 Identities=31% Similarity=0.340 Sum_probs=32.1
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (645)
...+|.|||+|-.|.++|..|++.|++|+++++++.
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPK 53 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 356899999999999999999999999999998753
No 382
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=90.41 E-value=0.25 Score=50.62 Aligned_cols=36 Identities=19% Similarity=0.329 Sum_probs=31.8
Q ss_pred CCcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
+...+|.|||.|..|..+|..|++.|++|+++++.+
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 345689999999999999999999999999999864
No 383
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=90.39 E-value=0.27 Score=48.68 Aligned_cols=34 Identities=21% Similarity=0.282 Sum_probs=31.2
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCc
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (645)
.+|.|||.|..|..+|..|++.|++|+++++++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 4699999999999999999999999999998753
No 384
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=90.32 E-value=0.11 Score=45.46 Aligned_cols=34 Identities=21% Similarity=0.257 Sum_probs=30.9
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
...|+|||+|..|..+|..|++.|++|+++++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 4579999999999999999999999999999864
No 385
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=90.29 E-value=0.24 Score=50.87 Aligned_cols=34 Identities=29% Similarity=0.339 Sum_probs=31.5
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
..+|+|+|+|.+|+.+|..|...|.+|+++|+.+
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999874
No 386
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=90.29 E-value=0.23 Score=48.14 Aligned_cols=34 Identities=21% Similarity=0.263 Sum_probs=31.2
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCC-eEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~-~~~~~~~~~ 110 (645)
..+|+|||+|-.|..+|..|++.|+ +++|+|++.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 4689999999999999999999998 899999874
No 387
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=90.25 E-value=0.26 Score=49.98 Aligned_cols=34 Identities=32% Similarity=0.560 Sum_probs=31.1
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEecc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (645)
.+.+|.|||+|-.|.++|..|++.|++|+++++.
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 3568999999999999999999999999999986
No 388
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=90.21 E-value=0.26 Score=52.44 Aligned_cols=33 Identities=30% Similarity=0.317 Sum_probs=30.8
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
.+|.|||+|..|...|..|+++|++|+++|+++
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 479999999999999999999999999999864
No 389
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=90.09 E-value=0.24 Score=49.08 Aligned_cols=34 Identities=24% Similarity=0.416 Sum_probs=30.7
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
....|.|||+|..|...|..|+ +|++|+++|+.+
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 3568999999999999999999 999999999864
No 390
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=90.07 E-value=0.18 Score=50.16 Aligned_cols=34 Identities=21% Similarity=0.149 Sum_probs=31.7
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
..+|.|||.|..|..+|..|++.|++|+++|+++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 48 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRI 48 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSST
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999999875
No 391
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=90.02 E-value=0.27 Score=49.69 Aligned_cols=33 Identities=33% Similarity=0.303 Sum_probs=30.1
Q ss_pred CcEEEEcCCHHHHH-HHHHHHHCCCeEEEEeccC
Q 006440 78 LRILVAGGGIGGLV-FALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~-~a~~l~~~g~~~~~~~~~~ 110 (645)
.+|.|||.|.+|++ +|..|+++|++|++.|+..
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 47999999999996 8999999999999999864
No 392
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=89.99 E-value=0.27 Score=49.21 Aligned_cols=32 Identities=31% Similarity=0.391 Sum_probs=29.7
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
.+|+|||+|-.|.++|..|+ .|++|++++|..
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 57999999999999999999 999999999863
No 393
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=89.89 E-value=0.32 Score=45.87 Aligned_cols=33 Identities=21% Similarity=0.229 Sum_probs=30.6
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
.+|.|||+|-.|..+|..|++.|++|++++++.
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 579999999999999999999999999999864
No 394
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=89.88 E-value=0.19 Score=47.58 Aligned_cols=33 Identities=12% Similarity=0.130 Sum_probs=30.2
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCeEEE-EeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFEVLV-FEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~-~~~~~ 110 (645)
.+|.|||+|-.|.++|..|++.|++|++ +++++
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 5799999999999999999999999999 88764
No 395
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=89.85 E-value=0.23 Score=52.01 Aligned_cols=33 Identities=21% Similarity=0.379 Sum_probs=30.3
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCc
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (645)
.+|.|||+|-.|+.+|..|++ |++|+++|+++.
T Consensus 37 mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~ 69 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQA 69 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHH
Confidence 589999999999999999998 999999998753
No 396
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=89.82 E-value=0.35 Score=48.66 Aligned_cols=34 Identities=26% Similarity=0.353 Sum_probs=31.1
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCC-eEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~-~~~~~~~~~ 110 (645)
..+|.|||+|.+|.++|..|+..|+ ++.++|...
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 4689999999999999999999998 999999864
No 397
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=89.74 E-value=0.3 Score=49.31 Aligned_cols=33 Identities=24% Similarity=0.492 Sum_probs=30.3
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCC--eEEEEecc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKD 109 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~--~~~~~~~~ 109 (645)
..+|.|||+|.+|.++|..|+..|+ +++++|..
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 4689999999999999999999998 89999975
No 398
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=89.72 E-value=0.3 Score=49.16 Aligned_cols=32 Identities=22% Similarity=0.458 Sum_probs=29.2
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEecc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (645)
..+|.|||+|-.|.++|..|++.|++|+++ ++
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 357999999999999999999999999999 65
No 399
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=89.69 E-value=0.24 Score=52.39 Aligned_cols=32 Identities=31% Similarity=0.344 Sum_probs=30.2
Q ss_pred cEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 79 RILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 79 ~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
+|.|||+|-.|+.+|..|++.|++|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 69999999999999999999999999999864
No 400
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=89.61 E-value=0.26 Score=49.49 Aligned_cols=33 Identities=12% Similarity=0.265 Sum_probs=30.5
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCC-eEEEEecc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKD 109 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~-~~~~~~~~ 109 (645)
..+|.|||.|..|..+|..|++.|+ +|+++++.
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 4589999999999999999999999 99999985
No 401
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=89.38 E-value=0.35 Score=48.46 Aligned_cols=32 Identities=25% Similarity=0.304 Sum_probs=29.3
Q ss_pred cEEEEcCCHHHHHHHHHHHHC--CCeEEEEeccC
Q 006440 79 RILVAGGGIGGLVFALAAKRK--GFEVLVFEKDM 110 (645)
Q Consensus 79 ~v~i~g~g~~g~~~a~~l~~~--g~~~~~~~~~~ 110 (645)
+|+|||+|-.|..+|..|++. |++|+++|++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 699999999999999999995 79999999864
No 402
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=89.30 E-value=0.36 Score=48.60 Aligned_cols=34 Identities=15% Similarity=0.269 Sum_probs=30.7
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCC--eEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~--~~~~~~~~~ 110 (645)
..+|+|||+|-+|..+|+.|+..|+ ++.++|.+.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999999998 899999763
No 403
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=89.30 E-value=0.33 Score=51.86 Aligned_cols=34 Identities=26% Similarity=0.380 Sum_probs=31.3
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
..+|.|||+|..|...|..|++.|++|+++|+++
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3479999999999999999999999999999864
No 404
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=89.26 E-value=0.31 Score=49.09 Aligned_cols=34 Identities=24% Similarity=0.341 Sum_probs=31.5
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
..+|.|||.|..|..+|..|++.|++|+++++.+
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 3589999999999999999999999999999864
No 405
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=89.21 E-value=0.4 Score=47.16 Aligned_cols=34 Identities=32% Similarity=0.405 Sum_probs=31.3
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCc
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (645)
..|+|.|+|..|..++..|.++|++|+++.|...
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 4799999999999999999999999999998753
No 406
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=89.11 E-value=0.12 Score=49.20 Aligned_cols=32 Identities=22% Similarity=0.255 Sum_probs=29.8
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEec
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEK 108 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~ 108 (645)
..+|.|||.|..|.++|..|+++|++|+.+++
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSS
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecC
Confidence 35799999999999999999999999999987
No 407
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=89.08 E-value=0.3 Score=52.04 Aligned_cols=34 Identities=12% Similarity=0.094 Sum_probs=31.4
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~ 230 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRT 230 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSS
T ss_pred CCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECC
Confidence 4689999999999999999999999999999764
No 408
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=89.01 E-value=0.39 Score=50.05 Aligned_cols=34 Identities=29% Similarity=0.425 Sum_probs=31.3
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
...|+|+|+|.+|+.+|..+...|.+|+++|+.+
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4689999999999999999999999999999864
No 409
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=88.92 E-value=0.41 Score=47.95 Aligned_cols=33 Identities=18% Similarity=0.251 Sum_probs=30.2
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCC-eEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~-~~~~~~~~~ 110 (645)
.+|.|||+|-+|..+|..|+..|+ +|+++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 479999999999999999999997 999999763
No 410
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=88.89 E-value=0.46 Score=47.46 Aligned_cols=34 Identities=21% Similarity=0.365 Sum_probs=31.3
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
..+|.|||.|..|..+|..|++.|++|+++++.+
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999864
No 411
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=88.72 E-value=0.26 Score=49.43 Aligned_cols=31 Identities=26% Similarity=0.310 Sum_probs=29.3
Q ss_pred CcEEEEcCCHHHHHHHHHHHHC-----C-CeEEEEec
Q 006440 78 LRILVAGGGIGGLVFALAAKRK-----G-FEVLVFEK 108 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~-----g-~~~~~~~~ 108 (645)
.+|.|||+|..|..+|..|++. | ++|+++++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 4799999999999999999999 9 99999987
No 412
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=88.70 E-value=0.32 Score=49.21 Aligned_cols=30 Identities=20% Similarity=0.352 Sum_probs=28.9
Q ss_pred cEEEEcCCHHHHHHHHHHHHCCCeEEEEec
Q 006440 79 RILVAGGGIGGLVFALAAKRKGFEVLVFEK 108 (645)
Q Consensus 79 ~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~ 108 (645)
+|.|||+|..|..+|..|++.|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 599999999999999999999999999998
No 413
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=88.39 E-value=0.3 Score=48.33 Aligned_cols=33 Identities=30% Similarity=0.376 Sum_probs=30.7
Q ss_pred cEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCc
Q 006440 79 RILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (645)
Q Consensus 79 ~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (645)
+|.|||.|..|..+|..|++.|++|+++++++.
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 699999999999999999999999999998753
No 414
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=88.39 E-value=0.46 Score=49.22 Aligned_cols=34 Identities=35% Similarity=0.439 Sum_probs=31.2
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
...|+|+|+|.+|+.+|..+...|.+|+++|+.+
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5689999999999999999999999999999864
No 415
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=88.36 E-value=0.43 Score=48.00 Aligned_cols=33 Identities=12% Similarity=0.097 Sum_probs=31.0
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCC-CeEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRKG-FEVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g-~~~~~~~~~~ 110 (645)
.+|.|||.|-.|..+|..|++.| ++|+++++.+
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 57999999999999999999999 9999999874
No 416
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=88.30 E-value=0.42 Score=49.01 Aligned_cols=33 Identities=27% Similarity=0.459 Sum_probs=30.7
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
..|+|+|+|.+|+.++..|+..|.+|+++++.+
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 689999999999999999999999999999863
No 417
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=88.17 E-value=0.42 Score=48.08 Aligned_cols=34 Identities=21% Similarity=0.474 Sum_probs=30.2
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCC--eEEEEecc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKD 109 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~--~~~~~~~~ 109 (645)
...+|+|||+|-+|.++|..|+.+|+ .+.++|.+
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 44689999999999999999999986 89999975
No 418
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=88.07 E-value=0.49 Score=47.57 Aligned_cols=33 Identities=24% Similarity=0.585 Sum_probs=29.7
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCC--eEEEEecc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKD 109 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~--~~~~~~~~ 109 (645)
..+|+|||+|..|.++|+.|+..|+ ++.++|.+
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~ 40 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDAN 40 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4689999999999999999999886 79999976
No 419
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=88.00 E-value=0.41 Score=47.01 Aligned_cols=33 Identities=18% Similarity=0.270 Sum_probs=30.7
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
.+|+|.|+|..|..++..|.++|++|+++.|..
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 579999999999999999999999999999864
No 420
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=87.99 E-value=0.63 Score=42.83 Aligned_cols=34 Identities=35% Similarity=0.507 Sum_probs=31.2
Q ss_pred CcEEEEcC-CHHHHHHHHHHHHCCCeEEEEeccCc
Q 006440 78 LRILVAGG-GIGGLVFALAAKRKGFEVLVFEKDMS 111 (645)
Q Consensus 78 ~~v~i~g~-g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (645)
..|+|.|| |..|..++..|.++|++|+++.|.+.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~ 38 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSS 38 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChh
Confidence 47999999 99999999999999999999998754
No 421
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=87.98 E-value=0.39 Score=51.30 Aligned_cols=36 Identities=28% Similarity=0.426 Sum_probs=31.9
Q ss_pred CCcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
+.+.+|.|||+|..|..+|..|++.|++|+++++.+
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 445689999999999999999999999999999864
No 422
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=87.97 E-value=0.4 Score=47.54 Aligned_cols=32 Identities=16% Similarity=0.104 Sum_probs=29.7
Q ss_pred cEEEEcCCHHHHHHHHHHHHCCC--eEEEEeccC
Q 006440 79 RILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 110 (645)
Q Consensus 79 ~v~i~g~g~~g~~~a~~l~~~g~--~~~~~~~~~ 110 (645)
+|.|||+|..|.++|..|++.|+ ++.++|..+
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 69999999999999999999998 899999863
No 423
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=87.89 E-value=0.49 Score=44.23 Aligned_cols=32 Identities=28% Similarity=0.324 Sum_probs=29.7
Q ss_pred cEEEEc-CCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 79 RILVAG-GGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 79 ~v~i~g-~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
+|+|+| +|-.|..+|..|++.|++|+++++++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 589999 99999999999999999999999863
No 424
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=87.79 E-value=0.3 Score=50.19 Aligned_cols=32 Identities=28% Similarity=0.380 Sum_probs=30.1
Q ss_pred cEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 79 RILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 79 ~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
+|.|||+|-.|.++|..|++.|++|+++++.+
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 79999999999999999999999999999863
No 425
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=87.74 E-value=0.49 Score=50.40 Aligned_cols=35 Identities=26% Similarity=0.404 Sum_probs=32.0
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (645)
..+|.|||.|..|..+|..|++.|++|+++++.+.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~ 38 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVS 38 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTH
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 35799999999999999999999999999998753
No 426
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=87.72 E-value=0.44 Score=46.23 Aligned_cols=34 Identities=12% Similarity=0.159 Sum_probs=30.8
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCC----CeEEEEeccCc
Q 006440 78 LRILVAGGGIGGLVFALAAKRKG----FEVLVFEKDMS 111 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g----~~~~~~~~~~~ 111 (645)
.+|.|||+|-.|..+|..|++.| ++|+++++.+.
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 47999999999999999999999 79999998753
No 427
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=87.71 E-value=0.42 Score=48.12 Aligned_cols=32 Identities=34% Similarity=0.445 Sum_probs=29.8
Q ss_pred cEEEEcCCHHHHHHHHHHHHCCC--eEEEEeccC
Q 006440 79 RILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 110 (645)
Q Consensus 79 ~v~i~g~g~~g~~~a~~l~~~g~--~~~~~~~~~ 110 (645)
+|.|||+|-.|.++|..|++.|+ +|+++|+..
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 69999999999999999999999 999999863
No 428
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=87.69 E-value=0.54 Score=48.41 Aligned_cols=34 Identities=24% Similarity=0.335 Sum_probs=31.2
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
...|+|+|+|.+|..+|..|+..|.+|+++|+.+
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4689999999999999999999999999999763
No 429
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=87.67 E-value=0.52 Score=46.26 Aligned_cols=32 Identities=25% Similarity=0.354 Sum_probs=29.7
Q ss_pred cEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 79 RILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 79 ~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
+|.|||+|..|.++|..|++.|++|+++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 58999999999999999999999999998763
No 430
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=87.53 E-value=0.37 Score=50.29 Aligned_cols=31 Identities=29% Similarity=0.317 Sum_probs=29.1
Q ss_pred cEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 79 RILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 79 ~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
+|.|||+|-.|+.+|..|++ |++|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 69999999999999999999 99999999864
No 431
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=87.50 E-value=0.43 Score=47.49 Aligned_cols=33 Identities=24% Similarity=0.248 Sum_probs=30.8
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
.+|.|||+|..|..+|..|++.|++|+++++++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 479999999999999999999999999999864
No 432
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=87.47 E-value=1.9 Score=44.73 Aligned_cols=37 Identities=16% Similarity=0.292 Sum_probs=29.5
Q ss_pred eEEcCceEEEEEeeCCeEEEEEcCCcEEeccEEEEccCCch
Q 006440 204 IILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWS 244 (645)
Q Consensus 204 ~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a~lvVgADG~~S 244 (645)
.++.+++|++++.+ + |++++|+++.+|+||.|-|...
T Consensus 234 ~~~~~~~v~~i~~~--~--v~~~~g~~~~~D~vi~a~G~~~ 270 (409)
T 3h8l_A 234 KLVHNFKIKEIREH--E--IVDEKGNTIPADITILLPPYTG 270 (409)
T ss_dssp EEECSCCEEEECSS--E--EEETTSCEEECSEEEEECCEEC
T ss_pred EEEcCCceEEECCC--e--EEECCCCEEeeeEEEECCCCCc
Confidence 37778888888643 3 6788999999999999999653
No 433
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=87.46 E-value=0.45 Score=47.29 Aligned_cols=34 Identities=24% Similarity=0.310 Sum_probs=31.1
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
..+|.|||+|-.|...|..|++.|++|+++++.+
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3579999999999999999999999999999864
No 434
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=87.39 E-value=0.44 Score=47.28 Aligned_cols=33 Identities=18% Similarity=0.366 Sum_probs=30.6
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
.+|.|||+|..|..+|..|++.|++|.++++.+
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 479999999999999999999999999999864
No 435
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=87.39 E-value=0.62 Score=43.49 Aligned_cols=32 Identities=28% Similarity=0.419 Sum_probs=29.7
Q ss_pred cEEEEcC-CHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 79 RILVAGG-GIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 79 ~v~i~g~-g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
+|+|.|| |..|..++..|.++|++|+++.|++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 5999996 9999999999999999999999875
No 436
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=87.39 E-value=0.72 Score=46.40 Aligned_cols=33 Identities=24% Similarity=0.234 Sum_probs=30.3
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCC--eEEEEecc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKD 109 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~--~~~~~~~~ 109 (645)
..+|.|||+|..|..+|..|+..|+ ++.++|..
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~ 55 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLADEVALVDVM 55 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC
Confidence 3579999999999999999999998 89999975
No 437
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=87.39 E-value=0.5 Score=48.39 Aligned_cols=35 Identities=31% Similarity=0.425 Sum_probs=31.9
Q ss_pred CCcCcEEEEcCCHHHHHHHHHHHHCCC-eEEEEecc
Q 006440 75 NKKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKD 109 (645)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~-~~~~~~~~ 109 (645)
..+.+|+|+|||-||..+|..|...|. +|+++|+.
T Consensus 186 l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 186 LDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKF 221 (398)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence 345789999999999999999999999 99999986
No 438
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=87.38 E-value=0.6 Score=45.97 Aligned_cols=34 Identities=18% Similarity=0.315 Sum_probs=31.1
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCC---eEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGF---EVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~---~~~~~~~~~ 110 (645)
..+|.|||+|-.|.++|..|.+.|+ +|+++++++
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 3579999999999999999999999 999999864
No 439
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=87.36 E-value=0.24 Score=47.28 Aligned_cols=34 Identities=9% Similarity=0.094 Sum_probs=30.3
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (645)
...|+|+|+|..|..+|..|.+.|+ |+++|+++.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~ 42 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENV 42 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGG
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHH
Confidence 4579999999999999999999999 999998753
No 440
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=87.29 E-value=0.49 Score=47.21 Aligned_cols=33 Identities=30% Similarity=0.513 Sum_probs=30.1
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCC--eEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~--~~~~~~~~~ 110 (645)
.+|.|||+|.+|..+|..|+.+|+ ++.|+|...
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 579999999999999999999999 999999864
No 441
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=87.16 E-value=0.62 Score=45.61 Aligned_cols=33 Identities=24% Similarity=0.251 Sum_probs=30.5
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEecc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (645)
...|+|+|+|-+|.++|..|++.|.+|++++|.
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 357999999999999999999999999999876
No 442
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=87.10 E-value=0.63 Score=46.04 Aligned_cols=33 Identities=30% Similarity=0.574 Sum_probs=30.2
Q ss_pred CcEEEEcC-CHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 78 LRILVAGG-GIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~-g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
++|+|.|| |..|..++..|.++|++|+++-|++
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~ 34 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKP 34 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 36999998 9999999999999999999998764
No 443
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=87.07 E-value=0.42 Score=50.97 Aligned_cols=34 Identities=21% Similarity=0.162 Sum_probs=31.0
Q ss_pred CcEEEEcCCHHHHHHHHHHHHC--CCeEEEEeccCc
Q 006440 78 LRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMS 111 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~--g~~~~~~~~~~~ 111 (645)
.+|.|||.|-.|+.+|..|++. |++|+++|+++.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~ 41 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNES 41 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHH
Confidence 4799999999999999999999 899999998643
No 444
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=87.00 E-value=0.57 Score=47.39 Aligned_cols=37 Identities=30% Similarity=0.295 Sum_probs=30.7
Q ss_pred CCcCcEEEEcC-CHHHHHHHHHHHHCCCeEEEEeccCc
Q 006440 75 NKKLRILVAGG-GIGGLVFALAAKRKGFEVLVFEKDMS 111 (645)
Q Consensus 75 ~~~~~v~i~g~-g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (645)
.....|+|.|| |..|..++..|.++|++|+++++...
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 34568999998 99999999999999999999998753
No 445
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=86.95 E-value=0.54 Score=47.35 Aligned_cols=34 Identities=18% Similarity=0.294 Sum_probs=30.8
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCC----CeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKG----FEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g----~~~~~~~~~~ 110 (645)
..+|.|||+|-.|.++|..|++.| ++|+++++.+
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 457999999999999999999999 8999999864
No 446
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=86.89 E-value=0.47 Score=50.71 Aligned_cols=34 Identities=18% Similarity=0.235 Sum_probs=30.8
Q ss_pred CcEEEEcCCHHHHHHHHHHHHC--CCeEEEEeccCc
Q 006440 78 LRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMS 111 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~--g~~~~~~~~~~~ 111 (645)
.+|.|||+|-.|+.+|..|++. |++|+++|+++.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~ 45 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTA 45 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHH
Confidence 4799999999999999999998 799999998643
No 447
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=86.88 E-value=0.34 Score=49.46 Aligned_cols=33 Identities=15% Similarity=0.164 Sum_probs=30.7
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCC-------CeEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRKG-------FEVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g-------~~~~~~~~~~ 110 (645)
.+|.|||+|-.|.++|..|++.| ++|+++++++
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~ 48 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEE 48 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCC
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcCh
Confidence 47999999999999999999999 9999999864
No 448
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=86.85 E-value=0.55 Score=46.71 Aligned_cols=33 Identities=21% Similarity=0.454 Sum_probs=30.4
Q ss_pred CcEEEEc-CCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 78 LRILVAG-GGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g-~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
.+|.||| +|..|.++|..|++.|++|+++++++
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 4699999 99999999999999999999999763
No 449
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=86.73 E-value=0.54 Score=47.08 Aligned_cols=32 Identities=25% Similarity=0.366 Sum_probs=29.6
Q ss_pred cEEEEcCCHHHHHHHHHHHHCCC--eEEEEeccC
Q 006440 79 RILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 110 (645)
Q Consensus 79 ~v~i~g~g~~g~~~a~~l~~~g~--~~~~~~~~~ 110 (645)
+|.|||+|..|.++|..|++.|+ ++.++|...
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 69999999999999999999998 899999864
No 450
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=86.72 E-value=0.68 Score=43.40 Aligned_cols=32 Identities=38% Similarity=0.597 Sum_probs=29.8
Q ss_pred cEEEEcC-CHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 79 RILVAGG-GIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 79 ~v~i~g~-g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
+|+|.|| |..|..++..|.++|++|+++.|..
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 5999998 9999999999999999999999864
No 451
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=86.69 E-value=0.66 Score=47.87 Aligned_cols=34 Identities=26% Similarity=0.377 Sum_probs=31.2
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
...|+|+|+|.+|..+|..++..|.+|+++|+.+
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4689999999999999999999999999999863
No 452
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=86.66 E-value=0.67 Score=49.20 Aligned_cols=35 Identities=23% Similarity=0.269 Sum_probs=31.3
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCC-eEEEEeccC
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~-~~~~~~~~~ 110 (645)
...+|+|||||.+|+-+|..+.+.|. +|+++++..
T Consensus 263 ~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~ 298 (456)
T 2vdc_G 263 AGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRD 298 (456)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCC
Confidence 34689999999999999999999998 599999864
No 453
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=86.66 E-value=0.55 Score=46.40 Aligned_cols=35 Identities=29% Similarity=0.421 Sum_probs=31.7
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCC-eEEEEeccC
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~-~~~~~~~~~ 110 (645)
...+|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 35689999999999999999999998 799999874
No 454
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=86.66 E-value=0.68 Score=46.95 Aligned_cols=33 Identities=12% Similarity=0.159 Sum_probs=30.7
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
.+|.|||.|..|.++|..|++.|++|+++|+++
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999864
No 455
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=86.66 E-value=0.54 Score=45.62 Aligned_cols=32 Identities=16% Similarity=0.357 Sum_probs=29.6
Q ss_pred cEEEEcCCHHHHHHHHHHHHCC-CeEEEEeccC
Q 006440 79 RILVAGGGIGGLVFALAAKRKG-FEVLVFEKDM 110 (645)
Q Consensus 79 ~v~i~g~g~~g~~~a~~l~~~g-~~~~~~~~~~ 110 (645)
+|.|||+|-.|..+|..|++.| ++|+++++.+
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 5899999999999999999999 9999999863
No 456
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=86.63 E-value=0.59 Score=47.04 Aligned_cols=33 Identities=21% Similarity=0.387 Sum_probs=30.2
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCC--eEEEEecc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKD 109 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~--~~~~~~~~ 109 (645)
..+|+|||+|.+|.++|..|+..|+ ++.++|..
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 4589999999999999999999998 89999975
No 457
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=86.59 E-value=0.63 Score=49.87 Aligned_cols=35 Identities=23% Similarity=0.324 Sum_probs=32.1
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (645)
..+|.|||.|..|..+|..|+++|++|+++++.+.
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~ 44 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQS 44 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSH
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46899999999999999999999999999998753
No 458
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=86.32 E-value=0.55 Score=46.99 Aligned_cols=33 Identities=18% Similarity=0.188 Sum_probs=29.9
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCC--CeEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRKG--FEVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g--~~~~~~~~~~ 110 (645)
.+|.|||+|-.|.++|..|+++| .+|+++|++.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 36999999999999999999999 7999999863
No 459
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=86.26 E-value=0.81 Score=45.09 Aligned_cols=33 Identities=12% Similarity=0.132 Sum_probs=30.5
Q ss_pred CcEEEEcC-CHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 78 LRILVAGG-GIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~-g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
.+|.|||+ |-.|..+|..|++.|++|+++++.+
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 47999999 9999999999999999999999763
No 460
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=86.16 E-value=0.7 Score=45.36 Aligned_cols=32 Identities=28% Similarity=0.563 Sum_probs=29.5
Q ss_pred cEEEEcCCHHHHHHHHHHHHCCC--eEEEEeccC
Q 006440 79 RILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 110 (645)
Q Consensus 79 ~v~i~g~g~~g~~~a~~l~~~g~--~~~~~~~~~ 110 (645)
+|.|||+|..|.++|..|++.|+ +|+++++++
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 69999999999999999999999 899999763
No 461
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=86.16 E-value=0.8 Score=44.65 Aligned_cols=34 Identities=24% Similarity=0.380 Sum_probs=31.3
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
...|+|+|+|-+|.++|..|++.|.+|+|+.|..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999864
No 462
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=86.15 E-value=0.73 Score=47.15 Aligned_cols=34 Identities=26% Similarity=0.497 Sum_probs=30.9
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCc
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (645)
..|+|+|||..|..+|..+.+.|++|+++|.++.
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 3699999999999999999999999999997653
No 463
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=86.06 E-value=0.8 Score=46.19 Aligned_cols=34 Identities=24% Similarity=0.311 Sum_probs=30.7
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCC--eEEEEecc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKD 109 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~--~~~~~~~~ 109 (645)
...+|.|||+|-+|.++|+.|+.+|+ ++.++|..
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 34689999999999999999999998 89999975
No 464
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=86.00 E-value=0.68 Score=49.18 Aligned_cols=34 Identities=15% Similarity=0.046 Sum_probs=30.4
Q ss_pred cCcEEEEcCCHHHHHHHHHHH--------------------HCCC-eEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAK--------------------RKGF-EVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~--------------------~~g~-~~~~~~~~~ 110 (645)
..+|+|||+|.+|+-+|..|+ +.|. +|+|+++..
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~ 199 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRG 199 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCC
Confidence 468999999999999999999 6788 699999874
No 465
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=85.90 E-value=0.6 Score=46.22 Aligned_cols=32 Identities=16% Similarity=0.229 Sum_probs=30.0
Q ss_pred cEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 79 RILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 79 ~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
+|.|||+|-.|..+|..|++.|++|+++++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 58999999999999999999999999999864
No 466
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=85.87 E-value=0.67 Score=47.39 Aligned_cols=34 Identities=18% Similarity=0.370 Sum_probs=31.4
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCC-eEEEEecc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKD 109 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~-~~~~~~~~ 109 (645)
.+.+|+|+|||-+|..+|..|...|. +|+++|+.
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 45789999999999999999999999 79999986
No 467
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=85.86 E-value=0.79 Score=46.21 Aligned_cols=35 Identities=17% Similarity=0.273 Sum_probs=31.6
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCC-eEEEEeccCc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDMS 111 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~-~~~~~~~~~~ 111 (645)
..+|+|||+|-.|..+|..|++.|+ +++|+|.+..
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~V 69 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 69 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEe
Confidence 5689999999999999999999999 6899998753
No 468
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=85.86 E-value=0.71 Score=46.38 Aligned_cols=34 Identities=21% Similarity=0.493 Sum_probs=30.3
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCC--eEEEEecc
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKD 109 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~--~~~~~~~~ 109 (645)
++.+|+|||+|-+|.++|+.|+..++ .+.++|..
T Consensus 4 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~ 39 (318)
T 1ez4_A 4 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVV 39 (318)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 34689999999999999999999887 79999974
No 469
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=85.68 E-value=0.74 Score=45.77 Aligned_cols=33 Identities=21% Similarity=0.224 Sum_probs=30.4
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCC-eEEEEecc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKD 109 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~-~~~~~~~~ 109 (645)
...|+|+|+|.+|.++|..|++.|. +|+|+.|.
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 4579999999999999999999998 89999986
No 470
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=85.67 E-value=0.7 Score=49.40 Aligned_cols=33 Identities=24% Similarity=0.391 Sum_probs=30.8
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
.+|.|||+|..|..+|..|++.|++|+++++.+
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 469999999999999999999999999999864
No 471
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=85.61 E-value=0.71 Score=48.97 Aligned_cols=33 Identities=21% Similarity=0.086 Sum_probs=30.9
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEecc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (645)
...|+|||||.+|...|..|.+.|.+|+|+++.
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 468999999999999999999999999999974
No 472
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=85.57 E-value=0.53 Score=49.36 Aligned_cols=34 Identities=24% Similarity=0.346 Sum_probs=31.3
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCc
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (645)
.+..|||.|-.|+.+|..|++.|++|+++|+++.
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~ 45 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQ 45 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 4688999999999999999999999999998754
No 473
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=85.40 E-value=0.78 Score=48.54 Aligned_cols=35 Identities=37% Similarity=0.252 Sum_probs=31.5
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
....|+|+|+|..|..+|..|+..|.+|+++|+++
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 34679999999999999999999999999999753
No 474
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=85.30 E-value=0.72 Score=43.38 Aligned_cols=35 Identities=26% Similarity=0.407 Sum_probs=31.4
Q ss_pred CcEEEEcC-CHHHHHHHHHHHHCCCeEEEEeccCcc
Q 006440 78 LRILVAGG-GIGGLVFALAAKRKGFEVLVFEKDMSA 112 (645)
Q Consensus 78 ~~v~i~g~-g~~g~~~a~~l~~~g~~~~~~~~~~~~ 112 (645)
..|+|.|| |..|..++..|.++|++|+++.|.+..
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 40 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEK 40 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGG
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCccc
Confidence 47999996 999999999999999999999997543
No 475
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=85.18 E-value=0.73 Score=44.54 Aligned_cols=34 Identities=24% Similarity=0.259 Sum_probs=31.0
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCC-eEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~-~~~~~~~~~ 110 (645)
..+|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 4689999999999999999999999 789999874
No 476
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=85.15 E-value=0.75 Score=51.79 Aligned_cols=33 Identities=24% Similarity=0.365 Sum_probs=31.0
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
.+|.|||+|..|...|..|++.|++|+++|+++
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 479999999999999999999999999999874
No 477
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=85.09 E-value=0.88 Score=43.72 Aligned_cols=33 Identities=15% Similarity=0.191 Sum_probs=30.4
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCC----eEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGF----EVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~----~~~~~~~~~ 110 (645)
.+|.|||+|-.|..+|..|.+.|+ +|+++++++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 479999999999999999999998 999999864
No 478
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=85.03 E-value=0.81 Score=48.78 Aligned_cols=34 Identities=21% Similarity=0.424 Sum_probs=31.3
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
+.+|.|||+|..|..+|..|++.|++|+++++.+
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 3579999999999999999999999999999864
No 479
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=84.96 E-value=0.93 Score=45.93 Aligned_cols=33 Identities=15% Similarity=0.288 Sum_probs=29.6
Q ss_pred cCcEEEEcC-CHHHHHHHHHHHHCCC--eEEEEecc
Q 006440 77 KLRILVAGG-GIGGLVFALAAKRKGF--EVLVFEKD 109 (645)
Q Consensus 77 ~~~v~i~g~-g~~g~~~a~~l~~~g~--~~~~~~~~ 109 (645)
..+|+|||+ |-+|.++|..|+.+|+ +++++|..
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~ 43 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF 43 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 357999998 9999999999999996 89999975
No 480
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=84.77 E-value=0.57 Score=48.31 Aligned_cols=33 Identities=21% Similarity=0.260 Sum_probs=30.4
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCC-------CeEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRKG-------FEVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g-------~~~~~~~~~~ 110 (645)
.+|.|||+|-.|.++|..|++.| ++|+++++.+
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~ 61 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDE 61 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECCh
Confidence 36999999999999999999999 9999999864
No 481
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=84.64 E-value=0.63 Score=46.25 Aligned_cols=34 Identities=26% Similarity=0.337 Sum_probs=27.9
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCc
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (645)
.+|-+||-|..|..+|..|.+.|++|+++|+.+.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTAS 39 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-----
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 4699999999999999999999999999998754
No 482
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=84.61 E-value=1 Score=44.66 Aligned_cols=35 Identities=23% Similarity=0.171 Sum_probs=31.7
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
....|.|||+|.+|..+|..|...|.+|+++++..
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 34689999999999999999999999999999864
No 483
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=84.59 E-value=1 Score=45.29 Aligned_cols=35 Identities=31% Similarity=0.467 Sum_probs=31.3
Q ss_pred CcCcEEEEcC-CHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 76 KKLRILVAGG-GIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 76 ~~~~v~i~g~-g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
....|+|.|| |..|..++..|+++|++|+++++..
T Consensus 19 ~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (330)
T 2pzm_A 19 SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFA 54 (330)
T ss_dssp TCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 3457999998 9999999999999999999999854
No 484
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=84.57 E-value=0.8 Score=48.86 Aligned_cols=32 Identities=38% Similarity=0.571 Sum_probs=30.2
Q ss_pred cEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 79 RILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 79 ~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
+|.|||+|..|..+|..|++.|++|+++++.+
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 69999999999999999999999999999864
No 485
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=84.54 E-value=0.95 Score=45.88 Aligned_cols=33 Identities=24% Similarity=0.253 Sum_probs=30.4
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
..|.|||+|..|.++|..|++.|++|+++++..
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 469999999999999999999999999999763
No 486
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=84.54 E-value=0.75 Score=45.06 Aligned_cols=33 Identities=12% Similarity=0.187 Sum_probs=30.6
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEecc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (645)
...|+|+|+|-+|.++|..|++.|.+|+|+.|.
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~ 151 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQQNIVLANRT 151 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 357999999999999999999999999999986
No 487
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=84.34 E-value=0.67 Score=45.59 Aligned_cols=31 Identities=26% Similarity=0.397 Sum_probs=28.8
Q ss_pred cEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 79 RILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 79 ~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
+|.|||+|..|...|..|++ |++|+++++.+
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 69999999999999999999 99999999864
No 488
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=84.31 E-value=1.1 Score=44.66 Aligned_cols=35 Identities=23% Similarity=0.198 Sum_probs=31.7
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
....|.|||+|.+|..+|..|...|++|+++++..
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 34679999999999999999999999999999864
No 489
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=84.30 E-value=0.83 Score=44.81 Aligned_cols=34 Identities=24% Similarity=0.377 Sum_probs=30.9
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
..+|+|||+|-+|.++|..|.+.|++|+++++..
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 4579999999999999999999999999999863
No 490
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=84.21 E-value=1.3 Score=42.96 Aligned_cols=36 Identities=25% Similarity=0.163 Sum_probs=31.1
Q ss_pred CCcCcEEEEcC-C-HHHHHHHHHHHHCCCeEEEEeccC
Q 006440 75 NKKLRILVAGG-G-IGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 75 ~~~~~v~i~g~-g-~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
.....|+|.|| | -.|.++|..|+++|++|++++++.
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~ 57 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHE 57 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCH
Confidence 34567999999 7 499999999999999999999864
No 491
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=84.08 E-value=0.83 Score=44.40 Aligned_cols=33 Identities=33% Similarity=0.431 Sum_probs=30.0
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCe-EEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFE-VLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~-~~~~~~~~ 110 (645)
.+|.|||+|-.|..+|..|++.|++ |.++++.+
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 5799999999999999999999999 89999763
No 492
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=83.96 E-value=0.59 Score=48.69 Aligned_cols=30 Identities=33% Similarity=0.543 Sum_probs=28.0
Q ss_pred CcEEEEcCCHHHHHHHHHHHH-CCCeEEEEe
Q 006440 78 LRILVAGGGIGGLVFALAAKR-KGFEVLVFE 107 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~-~g~~~~~~~ 107 (645)
.+|.|||+|-.|.++|..|++ .|++|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 379999999999999999998 499999999
No 493
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=83.84 E-value=0.85 Score=44.24 Aligned_cols=30 Identities=23% Similarity=0.228 Sum_probs=28.1
Q ss_pred cEEEEcCCHHHHHHHHHHHHCCCeEEEEec
Q 006440 79 RILVAGGGIGGLVFALAAKRKGFEVLVFEK 108 (645)
Q Consensus 79 ~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~ 108 (645)
+|.|||+|-.|..+|..|++.|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 589999999999999999999999999865
No 494
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=83.81 E-value=1.1 Score=46.30 Aligned_cols=35 Identities=23% Similarity=0.160 Sum_probs=32.3
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccCc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (645)
...++|+|||..|.++|..++..|++|+++|.++.
T Consensus 204 ~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~ 238 (386)
T 2we8_A 204 RPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPV 238 (386)
T ss_dssp CCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchh
Confidence 46899999999999999999999999999998754
No 495
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=83.79 E-value=0.82 Score=44.84 Aligned_cols=35 Identities=23% Similarity=0.144 Sum_probs=31.6
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCC-eEEEEeccCc
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDMS 111 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~-~~~~~~~~~~ 111 (645)
...|+|+|+|-+|.++|..|++.|. +|+|+.|...
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~ 152 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVRPTLTVANRTMS 152 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGG
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHH
Confidence 4579999999999999999999999 8999998753
No 496
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=83.78 E-value=0.87 Score=51.20 Aligned_cols=33 Identities=27% Similarity=0.302 Sum_probs=30.9
Q ss_pred CcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
.+|.|||+|..|...|..|++.|++|+++|+++
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 469999999999999999999999999999874
No 497
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=83.59 E-value=1 Score=46.84 Aligned_cols=35 Identities=31% Similarity=0.200 Sum_probs=31.6
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
....|+|+|.|.+|..+|..|...|.+|+++|+++
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 34689999999999999999999999999999763
No 498
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=83.52 E-value=0.94 Score=46.20 Aligned_cols=34 Identities=18% Similarity=0.398 Sum_probs=31.0
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCC-eEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~-~~~~~~~~~ 110 (645)
..+|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 4689999999999999999999999 699999864
No 499
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=83.50 E-value=1.8 Score=45.99 Aligned_cols=35 Identities=26% Similarity=0.493 Sum_probs=31.4
Q ss_pred CcCcEEEEcCCHHHHHHHHHHHHCCC-eEEEEeccC
Q 006440 76 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (645)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~-~~~~~~~~~ 110 (645)
..+||+|||||++|+++|+.|++.|+ +|+|+|+..
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~ 38 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATD 38 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCC
Confidence 35799999999999999999999999 899999864
No 500
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=83.36 E-value=1.1 Score=47.87 Aligned_cols=34 Identities=35% Similarity=0.283 Sum_probs=31.1
Q ss_pred cCcEEEEcCCHHHHHHHHHHHHCCCeEEEEeccC
Q 006440 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (645)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (645)
...|+|+|+|..|..+|..|...|.+|+++|+.+
T Consensus 274 GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 274 GKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4579999999999999999999999999999763
Done!